Query psy11132
Match_columns 243
No_of_seqs 210 out of 1680
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 18:50:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 100.0 3.2E-33 1.1E-37 207.2 25.0 227 7-237 3-233 (284)
2 3b43_A Titin; I-SET IG fold, e 100.0 5.1E-32 1.7E-36 218.8 24.9 225 2-236 283-517 (570)
3 3b43_A Titin; I-SET IG fold, e 100.0 8.8E-32 3E-36 217.4 24.0 221 8-237 196-425 (570)
4 2yd9_A Receptor-type tyrosine- 100.0 1.3E-31 4.4E-36 200.4 15.9 223 7-237 4-246 (304)
5 3qs9_E FL cytokine receptor; i 100.0 6.4E-31 2.2E-35 209.7 17.3 220 2-238 222-449 (527)
6 1qz1_A Neural cell adhesion mo 100.0 2.5E-30 8.4E-35 192.2 16.8 225 9-237 2-237 (291)
7 2j8h_A Titin, connectin; cardi 100.0 5.9E-30 2E-34 179.6 17.4 188 8-198 3-196 (197)
8 2yd1_A Tyrosine-protein phosph 100.0 1.8E-29 6.3E-34 179.2 20.1 186 8-200 5-201 (212)
9 2yd6_A PTPRD protein; hydrolas 100.0 1.7E-29 5.6E-34 179.4 19.1 189 7-198 4-203 (212)
10 2rik_A Titin; I-SET IG fold, p 100.0 9.6E-29 3.3E-33 183.1 23.8 192 2-198 91-283 (284)
11 2ec8_A MAST/stem cell growth f 100.0 2.7E-30 9.2E-35 206.9 16.5 223 8-238 210-448 (524)
12 2a38_A Titin; Z1Z2, structural 100.0 9.9E-30 3.4E-34 178.0 17.1 186 8-198 4-194 (194)
13 3lcy_A Titin; A-BAND, IG tande 100.0 1.6E-29 5.5E-34 177.3 17.8 188 7-198 5-195 (197)
14 2wv3_A Neuroplastin; igcam, me 100.0 1.8E-28 6.1E-33 171.2 20.5 179 8-198 2-189 (190)
15 2c5d_C AXL oncogene, tyrosine- 100.0 1.6E-28 5.3E-33 172.1 19.7 180 8-197 1-191 (195)
16 2wim_A N-CAM 2, NCAM2, neural 100.0 8.7E-29 3E-33 183.8 19.1 223 8-237 3-235 (291)
17 2y25_A Myomesin; structural pr 100.0 1.5E-30 5.1E-35 195.6 9.2 224 7-237 5-263 (317)
18 3laf_A Deleted in colorectal c 100.0 7E-29 2.4E-33 192.4 18.8 230 2-237 114-353 (403)
19 1epf_A NCAM, protein (neural c 100.0 1.9E-28 6.7E-33 171.0 18.0 185 9-197 2-189 (191)
20 2r15_A Myomesin-1; sarcomeric 100.0 4.4E-28 1.5E-32 172.0 19.9 176 21-198 14-209 (212)
21 2iep_A Muscle-specific kinase 100.0 2.6E-29 9.1E-34 175.6 13.1 183 6-198 4-189 (192)
22 2jll_A NCAM2, neural cell adhe 100.0 9.7E-28 3.3E-32 185.2 23.2 221 9-236 1-240 (389)
23 2nzi_A Titin; IG-domain, FNIII 100.0 9E-28 3.1E-32 179.6 21.6 191 8-201 3-199 (305)
24 2va4_A NCAM2, N-CAM 2, neural 100.0 5.7E-28 2E-32 168.7 18.8 183 9-198 2-192 (192)
25 1ry7_B FGFR-3, fibroblast grow 100.0 3.5E-30 1.2E-34 195.0 8.1 210 16-232 15-258 (334)
26 3rbs_A Myomesin-1; immunoglobu 100.0 1.9E-28 6.6E-33 172.9 16.2 180 9-197 3-205 (207)
27 1rhf_A Tyrosine-protein kinase 100.0 1E-27 3.5E-32 166.1 18.8 176 9-197 2-181 (182)
28 3dmk_A DOWN syndrome cell adhe 100.0 6.4E-28 2.2E-32 202.4 20.6 228 2-235 520-753 (816)
29 2y23_A Myomesin; structural pr 100.0 9.3E-28 3.2E-32 180.0 19.4 219 18-238 10-264 (312)
30 3grw_A Fibroblast growth facto 100.0 8.5E-28 2.9E-32 173.8 18.3 183 16-200 22-219 (241)
31 4fa8_A Secreted protein BARF1; 100.0 1.8E-28 6E-33 172.3 14.1 171 18-191 2-194 (203)
32 1f97_A Junction adhesion molec 100.0 7E-28 2.4E-32 170.8 16.5 182 10-198 2-206 (212)
33 3oq3_B IFN-alpha/beta binding 100.0 9.3E-28 3.2E-32 181.4 17.0 209 17-237 37-273 (329)
34 2v5t_A NCAM2, N-CAM 2, neural 100.0 6.7E-28 2.3E-32 168.0 15.0 181 9-198 2-187 (189)
35 2wng_A Tyrosine-protein phosph 100.0 8.6E-28 2.9E-32 181.5 16.2 225 10-238 4-264 (327)
36 3o4o_C Interleukin-1 receptor 100.0 1.3E-28 4.6E-33 186.7 11.7 224 8-237 17-271 (339)
37 3qs7_E FL cytokine receptor; i 100.0 9.8E-28 3.3E-32 186.7 16.8 216 11-237 50-269 (423)
38 3ojm_B Fibroblast growth facto 100.0 7.3E-28 2.5E-32 173.0 14.7 190 8-199 14-221 (231)
39 2wim_A N-CAM 2, NCAM2, neural 100.0 5.1E-27 1.8E-31 174.3 19.6 190 2-198 91-283 (291)
40 2v9r_A Roundabout homolog 1; p 100.0 1.2E-28 4.1E-33 174.9 10.3 194 8-211 8-209 (212)
41 2ec8_A MAST/stem cell growth f 100.0 7E-28 2.4E-32 192.9 15.9 229 2-237 107-355 (524)
42 2v44_A NCAM2, neural cell adhe 100.0 1.8E-27 6.3E-32 165.8 15.9 176 13-197 6-185 (189)
43 1e07_A Carcinoembryonic antige 100.0 2E-26 7E-31 188.6 24.6 214 3-237 103-329 (642)
44 3dmk_A DOWN syndrome cell adhe 100.0 2.4E-27 8.1E-32 199.0 19.1 221 3-237 337-567 (816)
45 3k0w_A Mucosa-associated lymph 100.0 3.7E-27 1.3E-31 168.0 17.3 169 8-199 17-202 (218)
46 3rjd_A High affinity immunoglo 100.0 2.4E-27 8.3E-32 173.4 16.6 203 9-238 1-217 (262)
47 3p3y_A Neurofascin; IG domains 100.0 3.3E-27 1.1E-31 183.0 18.2 227 2-237 108-353 (404)
48 4dep_C Interleukin-1 receptor 100.0 3.3E-27 1.1E-31 179.7 17.9 212 16-238 14-272 (349)
49 1qz1_A Neural cell adhesion mo 100.0 2.5E-27 8.5E-32 176.0 16.7 193 2-198 93-289 (291)
50 1e07_A Carcinoembryonic antige 100.0 1.4E-26 4.9E-31 189.5 22.8 218 2-237 373-600 (642)
51 2rcj_C Light chain; immunoglob 100.0 4.3E-27 1.5E-31 188.3 18.4 229 7-237 112-364 (523)
52 1f2q_A High affinity immunoglo 100.0 1.6E-27 5.3E-32 164.4 13.7 167 7-198 2-170 (176)
53 2vr9_A Roundabout 1, ROBO; imm 100.0 1.6E-27 5.3E-32 169.8 13.6 190 7-198 7-205 (217)
54 4fom_A Poliovirus receptor-rel 100.0 9.5E-28 3.3E-32 179.7 13.0 221 17-237 7-254 (308)
55 1bih_A Hemolin; insect immunit 100.0 3.1E-28 1E-32 188.4 10.2 227 4-237 1-253 (395)
56 2rcj_C Light chain; immunoglob 100.0 6.4E-27 2.2E-31 187.3 18.0 228 8-238 218-469 (523)
57 2v5m_A Dscam; neurobiology SPL 100.0 2.4E-27 8.1E-32 183.0 15.0 226 2-237 96-348 (388)
58 3kld_A Contactin 4, axcam, BIG 100.0 3.2E-27 1.1E-31 182.1 15.5 225 4-237 96-336 (384)
59 3sgj_C Human FCG3A receptor; r 99.9 4.7E-27 1.6E-31 165.6 14.8 168 8-200 6-175 (204)
60 3kld_A Contactin 4, axcam, BIG 99.9 1.5E-27 5.3E-32 183.9 13.2 170 16-198 212-382 (384)
61 2o26_X MAST/stem cell growth f 99.9 5.6E-27 1.9E-31 174.1 15.4 206 7-236 10-229 (290)
62 3laf_A Deleted in colorectal c 99.9 7.6E-27 2.6E-31 181.0 16.5 187 2-198 208-400 (403)
63 3vh8_G Killer cell immunoglobu 99.9 3.4E-27 1.2E-31 177.4 14.1 224 3-238 18-259 (316)
64 1nbq_A JAM, junctional adhesio 99.9 1.2E-27 4E-32 169.3 10.6 184 8-198 3-208 (209)
65 3jz7_A MCAR, CAR, coxsackievir 99.9 4.7E-27 1.6E-31 166.8 13.7 178 16-198 7-211 (214)
66 1cs6_A Axonin-1; neural cell a 99.9 5.2E-27 1.8E-31 180.7 14.6 224 3-237 94-335 (382)
67 1itb_B Type 1 interleukin-1 re 99.9 1.2E-27 4.1E-32 179.7 9.7 214 15-237 11-250 (315)
68 2o26_X MAST/stem cell growth f 99.9 3.3E-26 1.1E-30 169.9 17.3 189 2-198 84-287 (290)
69 3p2t_A Leukocyte immunoglobuli 99.9 9.4E-27 3.2E-31 163.2 13.5 173 8-187 4-179 (196)
70 3qs7_E FL cytokine receptor; i 99.9 2.1E-26 7E-31 179.3 16.7 189 2-201 222-416 (423)
71 2y25_A Myomesin; structural pr 99.9 1.8E-27 6E-32 178.8 10.3 179 18-198 107-314 (317)
72 4fqp_A Poliovirus receptor; im 99.9 7E-27 2.4E-31 175.4 13.5 188 3-198 111-303 (313)
73 2oz4_A Intercellular adhesion 99.9 1.8E-25 6.1E-30 163.9 20.2 195 19-235 13-224 (265)
74 3bp6_B Programmed cell death 1 99.9 5.2E-26 1.8E-30 160.2 16.4 177 16-199 9-193 (202)
75 1wio_A CD4, T-cell surface gly 99.9 1.1E-26 3.7E-31 177.9 13.5 192 19-238 106-325 (363)
76 3ejj_X Macrophage colony-stimu 99.9 7.1E-26 2.4E-30 168.0 17.3 191 2-198 81-280 (289)
77 2ifg_A High affinity nerve gro 99.9 6.1E-27 2.1E-31 178.2 11.3 181 8-198 157-344 (347)
78 1fnl_A Low affinity immunoglob 99.9 5.1E-26 1.8E-30 156.6 14.9 166 8-198 6-173 (175)
79 2yd9_A Receptor-type tyrosine- 99.9 6.8E-26 2.3E-30 169.3 16.6 184 3-198 95-290 (304)
80 2ocw_A Polymeric-immunoglobuli 99.9 1.8E-25 6.2E-30 181.2 20.2 214 16-234 7-258 (585)
81 3p3y_A Neurofascin; IG domains 99.9 8.9E-26 3.1E-30 175.0 17.6 172 18-198 231-402 (404)
82 3u83_A Poliovirus receptor-rel 99.9 4.8E-27 1.6E-31 177.6 10.1 220 11-237 16-274 (331)
83 1bih_A Hemolin; insect immunit 99.9 5.1E-26 1.7E-30 175.9 16.0 174 16-197 219-394 (395)
84 1z7z_I Intercellular adhesion 99.9 2.6E-25 8.8E-30 174.9 20.2 221 2-237 78-320 (450)
85 1ugn_A LIR1, leukocyte immunog 99.9 2.4E-26 8.1E-31 161.4 12.4 185 7-198 3-197 (198)
86 1vca_A VCAM-D1,2, human vascul 99.9 9.8E-26 3.3E-30 158.6 15.5 176 20-207 12-200 (202)
87 2d3v_A Leukocyte immunoglobuli 99.9 2.3E-26 7.9E-31 161.2 11.9 174 7-187 3-180 (196)
88 3ry4_A Low affinity immunoglob 99.9 5.7E-26 1.9E-30 155.6 13.3 163 10-197 5-169 (170)
89 4fom_A Poliovirus receptor-rel 99.9 3.6E-27 1.2E-31 176.6 7.9 189 3-198 106-299 (308)
90 3ejj_X Macrophage colony-stimu 99.9 6.8E-26 2.3E-30 168.1 14.7 213 8-237 3-228 (289)
91 2v5m_A Dscam; neurobiology SPL 99.9 7.7E-26 2.6E-30 174.5 15.6 162 17-197 220-387 (388)
92 3r4d_A CEA-related cell adhesi 99.9 2.3E-25 7.8E-30 157.5 16.7 172 17-198 7-199 (208)
93 3b5h_A Cervical EMMPRIN, HAB18 99.9 8.4E-25 2.9E-29 151.7 19.1 165 19-198 8-182 (184)
94 1itb_B Type 1 interleukin-1 re 99.9 3.6E-25 1.2E-29 166.2 18.5 175 19-198 113-313 (315)
95 1wio_A CD4, T-cell surface gly 99.9 1.7E-26 5.7E-31 176.9 11.3 196 19-237 4-222 (363)
96 1cs6_A Axonin-1; neural cell a 99.9 5.4E-26 1.9E-30 175.1 14.2 175 9-198 206-381 (382)
97 4fqp_A Poliovirus receptor; im 99.9 4E-26 1.4E-30 171.3 12.9 215 16-237 7-259 (313)
98 2x1w_L Vascular endothelial gr 99.9 6.1E-26 2.1E-30 161.1 13.1 176 16-198 14-206 (213)
99 2gi7_A GPVI protein; IG-like d 99.9 4.1E-25 1.4E-29 153.3 16.8 159 6-187 5-168 (184)
100 1qgc_4 Protein (immunoglobulin 99.9 9.1E-26 3.1E-30 176.8 15.1 225 9-237 116-386 (438)
101 1z7z_I Intercellular adhesion 99.9 6.4E-26 2.2E-30 178.3 14.0 205 13-237 3-232 (450)
102 3s97_C Contactin-1; carbonic a 99.9 5.1E-26 1.8E-30 159.9 12.2 181 9-198 8-200 (201)
103 1uct_A Immunoglobulin alpha FC 99.9 9.4E-26 3.2E-30 160.5 13.1 184 6-200 6-199 (218)
104 1ry7_B FGFR-3, fibroblast grow 99.9 5.1E-26 1.8E-30 172.2 12.5 178 19-198 133-326 (334)
105 4f80_A Butyrophilin subfamily 99.9 2.2E-25 7.6E-30 159.7 14.6 177 18-198 13-212 (226)
106 4dep_C Interleukin-1 receptor 99.9 1.4E-25 4.7E-30 170.8 13.9 192 2-198 109-332 (349)
107 3oq3_B IFN-alpha/beta binding 99.9 1.4E-24 4.7E-29 164.1 19.2 184 7-197 126-328 (329)
108 1za6_B IGG heavy chain; immuno 99.9 1.5E-25 5E-30 170.4 13.6 219 17-237 8-285 (344)
109 3mj8_L Stimulatory hamster ant 99.9 3.2E-25 1.1E-29 157.4 14.5 181 10-194 2-208 (213)
110 3u83_A Poliovirus receptor-rel 99.9 1.7E-25 5.8E-30 169.1 13.4 190 2-199 123-320 (331)
111 2y23_A Myomesin; structural pr 99.9 1.6E-25 5.4E-30 167.8 13.0 182 9-198 106-311 (312)
112 1nkr_A P58-CL42 KIR; inhibitor 99.9 1.3E-24 4.5E-29 152.8 16.9 173 5-186 4-184 (201)
113 2ocw_A Polymeric-immunoglobuli 99.9 2.9E-24 9.8E-29 174.1 21.3 196 2-200 324-547 (585)
114 3qs9_E FL cytokine receptor; i 99.9 4.1E-25 1.4E-29 176.3 15.2 210 16-236 55-268 (527)
115 1oll_A NK receptor; immune sys 99.9 2.1E-24 7.3E-29 150.2 16.8 177 8-198 3-187 (188)
116 4frw_A Poliovirus receptor-rel 99.9 2.4E-25 8.2E-30 158.2 12.0 181 16-198 6-210 (218)
117 2fbo_J V1V2;, variable region- 99.9 1.7E-25 5.9E-30 162.5 11.0 177 17-196 10-249 (250)
118 1hng_A CD2; T lymphocyte adhes 99.9 2.2E-25 7.5E-30 153.4 10.5 157 18-197 5-174 (176)
119 3sbw_C Programmed cell death 1 99.9 2.4E-24 8.2E-29 153.7 16.2 180 16-199 8-211 (222)
120 4dkd_C Macrophage colony-stimu 99.9 6.8E-26 2.3E-30 168.3 8.3 213 7-237 2-228 (292)
121 2if7_A SLAM family member 6; N 99.9 2.6E-24 8.7E-29 150.3 15.8 161 16-192 5-185 (193)
122 4dkd_C Macrophage colony-stimu 99.9 8.2E-25 2.8E-29 162.5 13.1 193 2-200 81-282 (292)
123 1qgc_4 Protein (immunoglobulin 99.9 1.1E-24 3.6E-29 170.8 14.1 216 15-233 7-257 (438)
124 2wqr_A IG epsilon chain C regi 99.9 2.4E-25 8.3E-30 167.8 10.0 228 8-237 6-262 (323)
125 1igt_B IGG2A intact antibody - 99.9 6.6E-25 2.3E-29 172.3 12.6 226 9-237 123-389 (444)
126 3rjd_A High affinity immunoglo 99.9 2.6E-24 8.9E-29 157.3 14.6 168 2-189 76-249 (262)
127 1b6u_A KIR2DL3, P58 killer cel 99.9 8.3E-24 2.8E-28 153.7 16.2 188 6-200 4-202 (257)
128 2ny1_B T-cell surface glycopro 99.9 6.6E-25 2.3E-29 152.2 9.9 161 18-200 4-180 (184)
129 1jbj_A CD3 epsilon and gamma e 99.9 2.2E-24 7.7E-29 149.7 12.5 145 20-189 10-179 (186)
130 3v2a_R Vascular endothelial gr 99.9 5.8E-25 2E-29 183.5 10.4 206 18-235 233-463 (772)
131 2pet_A Lutheran blood group gl 99.9 1.5E-23 5.2E-28 150.4 15.8 169 16-185 7-211 (231)
132 3tv3_L PGT128 light chain, IG 99.9 2.9E-24 9.9E-29 152.2 11.5 176 12-193 4-205 (211)
133 1dr9_A B7-1 (CD80), T lymphocy 99.9 7.1E-24 2.4E-28 149.1 13.4 174 18-195 3-197 (201)
134 4i0k_A CD276 antigen; immunogl 99.9 1.9E-24 6.6E-29 154.3 10.4 180 17-198 3-205 (222)
135 1p6f_A NKP46, natural cytotoxi 99.9 4.7E-23 1.6E-27 148.6 17.6 179 7-199 5-191 (242)
136 3s96_B 3B5H10 FAB light chain; 99.9 7.3E-24 2.5E-28 150.8 12.9 180 10-193 2-214 (218)
137 3d9a_L Light chain of hyhel10 99.9 5.2E-24 1.8E-28 151.1 11.9 171 16-189 8-203 (213)
138 1lk3_L 9D7 light chain; antige 99.9 1.9E-23 6.4E-28 147.9 14.4 171 16-189 7-202 (210)
139 3vh8_G Killer cell immunoglobu 99.9 3.6E-23 1.2E-27 155.5 16.3 189 3-198 110-312 (316)
140 3nl4_L Antigen binding fragmen 99.9 8.4E-24 2.9E-28 150.0 12.2 171 10-183 2-198 (213)
141 3mj6_A Junctional adhesion mol 99.9 6.5E-24 2.2E-28 155.8 11.2 184 9-198 5-236 (268)
142 3eow_R Poliovirus receptor; im 99.9 8.9E-24 3.1E-28 150.8 10.7 181 16-198 6-211 (221)
143 1hzh_H IGG, immunoglobulin hea 99.9 3.2E-23 1.1E-27 163.3 14.8 218 17-237 8-294 (457)
144 3mjg_X Beta-type platelet-deri 99.9 1.9E-23 6.4E-28 155.0 12.7 204 10-235 1-220 (289)
145 2zg1_A Sialic acid-binding IG- 99.9 1.2E-22 4.1E-27 144.1 16.2 171 16-195 7-209 (214)
146 3pv7_A B7-H6, IG-like domain-c 99.9 4.2E-24 1.4E-28 155.1 8.7 179 16-197 10-224 (248)
147 2oz4_A Intercellular adhesion 99.9 9.4E-24 3.2E-28 154.7 10.6 168 2-198 91-263 (265)
148 1q0x_L FAB 9B1, light chain; a 99.9 6.3E-23 2.2E-27 145.4 14.5 174 16-192 7-208 (212)
149 2c1o_A IGK-C protein; FAB frag 99.9 2.8E-23 9.6E-28 151.3 12.7 180 7-189 36-245 (254)
150 1igt_B IGG2A intact antibody - 99.9 2.8E-23 9.5E-28 163.1 12.9 219 17-237 8-285 (444)
151 2xzc_L FAB A.17 light chain; i 99.9 6.2E-23 2.1E-27 145.9 13.2 173 16-190 7-206 (216)
152 2j6e_L IGM, FAB light chain; a 99.9 3.3E-23 1.1E-27 149.0 11.7 181 10-193 21-229 (234)
153 3o4o_C Interleukin-1 receptor 99.9 2E-23 6.7E-28 158.3 10.4 193 2-198 111-334 (339)
154 1hzh_H IGG, immunoglobulin hea 99.9 3.5E-23 1.2E-27 163.1 11.9 224 9-237 132-398 (457)
155 1c1e_H Catalytic antibody 1E9 99.9 2.5E-22 8.6E-27 143.0 15.2 175 17-194 8-215 (219)
156 3sob_L Antibody light chain; b 99.9 9.1E-23 3.1E-27 147.0 13.0 178 10-190 25-227 (237)
157 3r06_A Anti-mouse CD3epsilon a 99.9 7.1E-23 2.4E-27 145.2 12.2 177 10-189 2-203 (213)
158 1iga_A IGA1; immunoglobulin; N 99.9 4.4E-22 1.5E-26 157.5 17.7 212 21-237 138-393 (475)
159 2ghw_B Anti-SARS SCFV antibody 99.9 8.6E-22 3E-26 142.8 17.8 178 18-198 11-241 (247)
160 1f3r_B FV antibody fragment; I 99.9 6.2E-22 2.1E-26 144.4 16.6 178 18-198 9-244 (257)
161 1igy_B IGG1 intact antibody MA 99.9 5.8E-24 2E-28 166.5 6.2 218 17-237 7-275 (434)
162 2wng_A Tyrosine-protein phosph 99.9 1E-22 3.4E-27 153.7 12.7 183 3-189 110-309 (327)
163 1nfd_E H57 FAB; complex (immun 99.9 8E-24 2.7E-28 150.0 5.8 174 16-192 6-205 (212)
164 4fmk_A Poliovirus receptor-rel 99.9 1E-22 3.6E-27 145.2 11.6 178 18-197 10-215 (225)
165 1sy6_A T-cell surface glycopro 99.9 3.4E-23 1.1E-27 145.8 8.9 156 21-197 15-202 (204)
166 1nqb_A Single-chain antibody f 99.9 1.3E-21 4.3E-26 142.7 17.4 179 16-198 7-232 (256)
167 1igy_B IGG1 intact antibody MA 99.9 1.4E-24 4.9E-29 169.9 1.6 226 9-237 119-379 (434)
168 3mjg_X Beta-type platelet-deri 99.9 1.1E-21 3.9E-26 145.4 16.8 169 19-201 105-280 (289)
169 3v2a_R Vascular endothelial gr 99.9 6.2E-22 2.1E-26 165.2 17.2 217 17-238 134-372 (772)
170 2p1y_A Bispecific alpha/beta T 99.9 4.7E-22 1.6E-26 143.4 14.1 169 14-186 5-222 (238)
171 4dzb_B Vbeta2 (MAIT T cell rec 99.9 1.5E-22 5E-27 146.8 11.2 178 12-190 4-222 (246)
172 1hnf_A CD2; T lymphocyte adhes 99.9 3.8E-22 1.3E-26 137.5 12.1 157 17-196 7-178 (182)
173 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 1.9E-21 6.5E-26 141.8 16.3 184 11-198 5-247 (256)
174 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 6.5E-22 2.2E-26 141.2 13.6 174 18-194 9-218 (222)
175 2dru_A Chimera of CD48 antigen 99.9 5.2E-22 1.8E-26 136.9 12.2 156 17-195 7-177 (180)
176 3d9a_H Heavy chain of hyhel10 99.9 9.6E-22 3.3E-26 139.1 13.8 171 17-191 8-206 (210)
177 3bkj_L WO2 IGG2A FAB fragment 99.9 2.7E-22 9.4E-27 145.9 11.1 177 10-189 35-241 (252)
178 3esu_F Antibody 14B7* light ch 99.9 4E-21 1.4E-25 139.6 17.2 172 10-184 5-231 (250)
179 3auv_A SC-DSFV derived from th 99.9 6.3E-21 2.2E-25 140.5 18.1 187 9-198 12-253 (276)
180 2rgs_A I, IG gamma-2B heavy ch 99.9 4.1E-22 1.4E-26 141.8 10.7 180 8-188 8-205 (218)
181 3pl6_D MBP peptide / T-cell re 99.9 4.3E-22 1.5E-26 146.2 10.9 179 10-190 27-243 (268)
182 1moe_A Anti-CEA MAB T84.66; an 99.9 2.2E-21 7.5E-26 140.1 14.4 170 13-185 5-220 (240)
183 3uzq_A Anti-dengue MAB 4E11; d 99.9 2.3E-21 7.9E-26 141.1 14.2 180 16-199 8-244 (253)
184 3juy_B 3B3 single chain varian 99.9 3.3E-21 1.1E-25 140.5 14.9 177 9-187 6-244 (256)
185 1hxm_B Gamma-delta T-cell rece 99.9 8.3E-21 2.8E-25 137.2 16.6 184 12-197 4-227 (242)
186 3nl4_H Antigen binding fragmen 99.9 6.3E-21 2.2E-25 135.4 15.7 177 16-195 6-210 (215)
187 1gsm_A Madcam-1, mucosal addre 99.9 1.6E-20 5.3E-25 131.0 17.1 158 19-187 17-193 (210)
188 1dee_B IGM RF 2A2; FAB-IBP com 99.9 2.6E-20 9E-25 132.9 18.7 174 18-193 9-221 (223)
189 3umt_A SCFV heavy chain and li 99.9 4.9E-21 1.7E-25 139.6 15.2 177 18-198 11-244 (256)
190 1ccz_A Protein (CD58); LFA-3, 99.9 6.3E-22 2.2E-26 135.3 9.8 152 18-195 4-167 (171)
191 1pz5_B Heavy chain of FAB (SYA 99.9 4.3E-21 1.5E-25 136.8 14.5 174 17-193 8-215 (220)
192 3nfj_J T cell receptor beta ch 99.9 1.2E-21 4.1E-26 141.9 11.6 176 15-191 7-222 (245)
193 1mju_H Immunoglobulin MS6-12; 99.9 2.6E-21 8.9E-26 138.5 13.1 180 16-198 7-216 (227)
194 2znx_A SCFV; fluorotryptohpan, 99.9 5.8E-21 2E-25 138.0 15.1 171 12-185 4-222 (242)
195 3bqu_C 3H6 FAB light chain; be 99.9 3.4E-23 1.2E-27 148.9 3.0 176 10-188 24-224 (233)
196 2vol_A Murine IGG FC; FC, zinc 99.9 2.6E-21 8.9E-26 136.6 12.1 167 21-188 15-197 (207)
197 3mtr_A N-CAM-1, NCAM-1, neural 99.9 5.1E-21 1.7E-25 135.9 13.6 183 8-198 18-208 (215)
198 3ux9_B SCFV antibody; five hel 99.9 1.1E-20 3.9E-25 137.6 15.8 168 16-186 9-236 (256)
199 1svz_A Immunoglobulin;, single 99.9 1E-20 3.5E-25 137.1 15.5 169 14-185 6-228 (247)
200 3gkz_A Anti-methamphetamine si 99.9 1.5E-20 5E-25 137.1 16.3 181 16-198 15-248 (257)
201 1qok_A MFE-23 recombinant anti 99.9 1.2E-20 4E-25 139.5 15.9 180 15-198 32-267 (282)
202 4ei6_B Vbeta16 XV19 type II na 99.9 1.8E-21 6.2E-26 140.9 11.3 179 10-190 3-221 (245)
203 1op3_H FAB 2G12, heavy chain; 99.9 8.3E-21 2.8E-25 135.7 14.4 170 18-190 9-216 (225)
204 2gjj_A A21 single-chain antibo 99.9 1.3E-20 4.3E-25 138.0 15.3 174 9-185 5-239 (264)
205 3q5y_A TCR N15 beta; IG, T cel 99.9 6.2E-21 2.1E-25 137.7 13.4 178 11-190 4-215 (240)
206 2fbj_H IGA-kappa J539 FAB (hea 99.9 1.9E-20 6.6E-25 133.3 15.4 170 18-190 9-212 (220)
207 3bae_H WO2 IGG2A FAB fragment 99.9 1.1E-20 3.7E-25 135.4 13.6 173 17-192 8-219 (228)
208 1dn0_B IGM-kappa cold agglutin 99.9 3.6E-20 1.2E-24 133.0 16.1 179 18-198 9-226 (232)
209 1zvo_C Myeloma immunoglobulin 99.9 1E-19 3.4E-24 145.2 20.0 214 23-238 149-445 (512)
210 2wqr_A IG epsilon chain C regi 99.9 2.9E-21 9.9E-26 145.5 10.6 172 16-188 120-309 (323)
211 3qib_D 2B4 beta chain; IG doma 99.8 3.2E-21 1.1E-25 141.7 9.5 179 10-190 28-246 (270)
212 1iga_A IGA1; immunoglobulin; N 99.8 9.2E-20 3.2E-24 144.2 18.3 213 15-230 7-284 (475)
213 3o3u_N Maltose-binding peripla 99.8 1.2E-20 4.2E-25 152.8 13.5 168 17-188 374-566 (581)
214 3omz_A Human vdelta1 gamma del 99.8 4.4E-21 1.5E-25 140.1 9.5 175 9-185 2-231 (259)
215 2wbj_D OB TCR; transmembrane, 99.8 7.7E-21 2.6E-25 140.2 10.6 180 10-190 25-247 (279)
216 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 7E-20 2.4E-24 134.4 14.8 175 8-185 14-254 (268)
217 2w59_A IGY FCU3-4; immunoglobu 99.8 5.8E-21 2E-25 137.0 8.8 179 9-188 12-217 (231)
218 1c5d_H Monoclonal antibody aga 99.8 1.6E-19 5.4E-24 128.1 16.2 172 17-191 8-208 (215)
219 3m8o_H Immunoglobulin A1 heavy 99.8 2.8E-19 9.6E-24 127.4 17.5 170 18-189 9-213 (221)
220 3fku_X Neutralizing antibody F 99.8 3.7E-20 1.2E-24 136.7 12.9 190 16-209 7-259 (280)
221 1i1c_A IGG2A, IG gamma-2A chai 99.8 1.1E-20 3.8E-25 136.1 9.6 179 9-188 15-211 (239)
222 1l6x_A Immunoglobulin gamma-1 99.8 8.7E-21 3E-25 133.9 8.1 166 22-188 16-197 (207)
223 2xqy_G A13-D6.3 monoclonal ant 99.8 1.6E-19 5.6E-24 131.7 14.9 171 16-189 13-215 (261)
224 3liz_H 4C3 monoclonal antibody 99.8 9.8E-20 3.3E-24 132.4 13.4 180 17-198 8-219 (253)
225 2gki_A Nuclease; anti-DNA anti 99.8 1.5E-19 5.2E-24 134.0 14.0 182 16-200 29-273 (291)
226 1bec_A 14.3.D T cell antigen r 99.8 2.3E-19 7.9E-24 129.3 14.0 172 16-189 6-213 (238)
227 1zvo_C Myeloma immunoglobulin 99.8 1.5E-18 5.2E-23 138.4 19.6 177 16-193 7-226 (512)
228 1mq8_A ICAM-1, intercellular a 99.8 2E-19 6.9E-24 132.2 13.4 208 15-238 5-233 (291)
229 3bn9_D E2 FAB heavy chain; ant 99.8 1.2E-19 4.1E-24 131.9 11.4 170 18-190 9-221 (257)
230 1oga_E TRBC1, T-cell receptor 99.8 3.2E-20 1.1E-24 134.9 7.7 177 12-190 6-220 (252)
231 3shs_A HOC head outer capsid p 99.8 4.3E-18 1.5E-22 120.2 17.8 156 13-191 6-173 (304)
232 3knb_B Obscurin-like protein 1 99.8 9.8E-20 3.3E-24 114.3 8.4 96 8-105 12-107 (107)
233 1ypz_F T-cell receptor gamma c 99.8 4.2E-19 1.4E-23 127.3 12.1 176 13-190 5-218 (230)
234 2jll_A NCAM2, neural cell adhe 99.8 7.3E-18 2.5E-22 129.9 19.1 188 2-198 93-287 (389)
235 1za6_B IGG heavy chain; immuno 99.8 9.6E-20 3.3E-24 138.4 8.2 178 9-188 120-330 (344)
236 3to4_D NKT vbeta2 (mouse varia 99.8 4.5E-19 1.5E-23 129.0 10.8 171 16-189 8-220 (253)
237 3u2s_H PG9 heavy chain; greek 99.8 1.2E-18 4.1E-23 126.2 11.3 180 16-197 6-236 (248)
238 2nzi_A Titin; IG-domain, FNIII 99.8 1.3E-17 4.3E-22 124.5 17.2 184 3-192 93-283 (305)
239 3qhz_H Human monoclonal antibo 99.8 2.2E-18 7.6E-23 123.7 12.4 178 18-197 9-227 (232)
240 3tv3_H PGT128 heavy chain, IG 99.8 3.2E-18 1.1E-22 123.4 11.7 177 17-196 8-234 (239)
241 3knb_A Titin; IG-like, titin, 99.8 2.5E-18 8.6E-23 106.5 9.6 93 8-102 4-98 (100)
242 1ow0_A IG alpha-1 chain C regi 99.8 1.4E-19 4.9E-24 128.3 3.3 178 9-188 3-200 (214)
243 4acp_A IG gamma-1 chain C regi 99.8 1.4E-18 4.8E-23 124.9 8.3 178 9-187 22-217 (240)
244 3n9g_H FAB fragment of MAB CR4 99.8 2.6E-17 8.8E-22 117.9 14.6 177 18-198 9-224 (230)
245 2cqv_A MLCK, myosin light chai 99.8 2.2E-17 7.4E-22 105.1 12.3 101 7-109 5-105 (114)
246 1mq8_A ICAM-1, intercellular a 99.8 8.7E-19 3E-23 128.8 6.5 188 2-199 78-282 (291)
247 1iam_A ICAM-1, CD54, intercell 99.8 4.8E-17 1.6E-21 111.1 14.3 162 14-189 4-168 (185)
248 2aty_A Complement receptor chi 99.8 1.5E-17 5.2E-22 127.6 13.0 167 21-188 180-362 (376)
249 3knb_B Obscurin-like protein 1 99.7 5.6E-18 1.9E-22 106.2 8.5 82 115-198 23-104 (107)
250 2c1o_A IGK-C protein; FAB frag 99.7 1.5E-17 5.1E-22 121.0 11.6 156 74-237 11-197 (254)
251 2kdg_A Myotilin; immonoglobuli 99.7 1.3E-17 4.5E-22 103.6 9.0 97 7-104 3-99 (100)
252 2kkq_A Myotilin; unknown funct 99.7 7.9E-17 2.7E-21 102.7 12.4 101 6-107 12-113 (116)
253 1g1c_A Immunoglobulin-like dom 99.7 3.6E-17 1.2E-21 101.4 9.9 95 8-103 4-98 (99)
254 2yuz_A Myosin-binding protein 99.7 4.3E-17 1.5E-21 100.9 9.8 93 8-106 6-98 (100)
255 3sob_H Antibody heavy chain, l 99.7 9.6E-17 3.3E-21 116.8 12.7 178 17-198 31-250 (256)
256 2yd1_A Tyrosine-protein phosph 99.7 1.8E-16 6.2E-21 112.0 13.5 122 115-237 16-151 (212)
257 2yd6_A PTPRD protein; hydrolas 99.7 5.5E-17 1.9E-21 114.7 10.7 123 115-238 16-150 (212)
258 3knb_A Titin; IG-like, titin, 99.7 3E-17 1E-21 101.7 8.2 83 115-198 15-98 (100)
259 3mlr_H Human monoclonal anti-H 99.7 1.5E-16 5.2E-21 113.6 12.9 171 18-192 9-219 (226)
260 3qp3_A Titin; I-SET IG-like, s 99.7 2.6E-17 8.9E-22 102.8 7.8 98 5-104 4-101 (103)
261 2dm2_A Palladin; beta-sandwich 99.7 9.3E-17 3.2E-21 101.5 10.1 100 7-107 6-106 (110)
262 3iu4_H CHP3 FAB heavy chain; a 99.7 1.4E-16 4.7E-21 116.3 12.2 175 18-196 9-221 (263)
263 2j8h_A Titin, connectin; cardi 99.7 2.2E-16 7.6E-21 110.2 12.6 122 115-237 14-145 (197)
264 1ypz_E T cell receptor delta, 99.7 1.1E-16 3.9E-21 112.7 11.0 168 14-190 6-200 (207)
265 3kvq_A Vascular endothelial gr 99.7 4.8E-17 1.7E-21 102.5 8.0 102 2-107 3-104 (108)
266 1fhg_A Telokin; immunoglobulin 99.7 5.3E-17 1.8E-21 108.9 8.5 105 5-110 37-141 (154)
267 1u2h_A APEG-1, aortic preferen 99.7 1.2E-16 4E-21 99.0 9.1 95 8-103 4-98 (99)
268 1wwb_X Protein (brain derived 99.7 6.6E-16 2.3E-20 96.2 11.8 97 6-106 1-101 (103)
269 2dm3_A KIAA0992 protein, palla 99.7 3.8E-17 1.3E-21 103.3 6.2 99 8-107 8-106 (110)
270 3irg_B Obscurin-like protein 1 99.7 1E-16 3.6E-21 100.7 8.2 97 7-105 11-107 (107)
271 3lcy_A Titin; A-BAND, IG tande 99.7 2.6E-16 8.8E-21 109.8 10.3 121 115-237 17-144 (197)
272 1wit_A Twitchin 18TH IGSF modu 99.7 1.8E-16 6E-21 97.0 8.3 90 8-101 1-92 (93)
273 2e7c_A Myosin-binding protein 99.7 3.5E-16 1.2E-20 100.1 10.0 97 6-105 18-117 (118)
274 3puc_A Titin; I-SET IG-like do 99.7 2.9E-16 9.8E-21 97.3 9.3 94 7-102 4-97 (99)
275 2edj_A Roundabout homolog 2; K 99.7 3E-16 1E-20 97.4 9.3 94 7-105 6-100 (100)
276 2c5d_C AXL oncogene, tyrosine- 99.7 1.1E-15 3.8E-20 106.5 12.9 118 115-237 12-148 (195)
277 3f8u_B Tapasin; endoplasmic re 99.7 1.3E-14 4.3E-19 110.0 19.4 171 16-186 165-388 (401)
278 1g1c_A Immunoglobulin-like dom 99.7 3.5E-16 1.2E-20 96.9 9.0 83 115-198 15-97 (99)
279 3bn3_B ICAM-5, intercellular a 99.7 2.6E-15 8.8E-20 103.3 14.0 168 11-187 4-174 (196)
280 1waa_A Titin; metal binding pr 99.7 7.2E-16 2.5E-20 94.0 10.1 89 8-103 4-92 (93)
281 2eo9_A Roundabout homolog 1; b 99.7 1.1E-15 3.8E-20 97.8 11.3 97 7-108 6-103 (118)
282 2kkq_A Myotilin; unknown funct 99.7 1.3E-15 4.5E-20 97.0 11.4 95 104-200 15-110 (116)
283 2kdg_A Myotilin; immonoglobuli 99.7 2.8E-16 9.6E-21 97.5 8.0 83 115-198 15-97 (100)
284 1u2h_A APEG-1, aortic preferen 99.7 5.1E-16 1.8E-20 96.1 8.7 83 115-198 15-97 (99)
285 1he7_A High affinity nerve gro 99.7 2.3E-15 7.7E-20 96.0 11.5 94 8-106 3-102 (126)
286 1epf_A NCAM, protein (neural c 99.7 1.8E-15 6.3E-20 105.0 12.1 117 115-237 12-141 (191)
287 1wwb_X Protein (brain derived 99.7 1.9E-15 6.5E-20 94.1 10.6 80 118-198 14-97 (103)
288 2ckn_A Basic fibroblast growth 99.6 8.8E-16 3E-20 94.3 8.9 87 8-101 8-94 (95)
289 2bk8_A Connectin, M1, titin he 99.6 5.3E-15 1.8E-19 91.1 12.3 89 13-103 5-94 (97)
290 2cqv_A MLCK, myosin light chai 99.6 2.8E-15 9.6E-20 95.3 11.3 84 115-200 17-100 (114)
291 1nct_A Titin; cell adhesion, g 99.6 2.9E-16 9.8E-21 98.4 6.5 93 8-102 13-105 (106)
292 2a38_A Titin; Z1Z2, structural 99.6 7.6E-16 2.6E-20 107.2 9.2 121 115-237 15-144 (194)
293 2lu7_A Obscurin-like protein 1 99.6 2E-15 6.9E-20 90.0 9.5 81 17-104 4-84 (84)
294 3irg_A Titin; IG-like, titin, 99.6 1.5E-15 5.1E-20 94.2 9.3 93 8-102 4-98 (100)
295 2yr3_A Myosin light chain kina 99.6 2.3E-16 7.9E-21 97.7 5.5 91 6-101 8-98 (99)
296 1he7_A High affinity nerve gro 99.6 6.1E-15 2.1E-19 94.0 12.0 81 118-199 13-99 (126)
297 4fa8_A Secreted protein BARF1; 99.6 2.4E-16 8.1E-21 110.5 6.1 117 115-236 3-146 (203)
298 2v5y_A Receptor-type tyrosine- 99.6 7.6E-15 2.6E-19 122.0 16.0 185 23-222 90-284 (731)
299 2dav_A SLOW MYBP-C, myosin-bin 99.6 7.3E-15 2.5E-19 93.7 12.2 96 10-105 8-114 (126)
300 1wwc_A Protein (NT-3 growth fa 99.6 4.3E-15 1.5E-19 95.0 11.3 101 2-106 1-104 (118)
301 3qp3_A Titin; I-SET IG-like, s 99.6 5E-16 1.7E-20 96.9 6.7 83 115-199 18-100 (103)
302 2eny_A Obscurin; beta-sandwich 99.6 1.7E-15 5.7E-20 94.5 9.0 92 9-106 8-100 (104)
303 3rbs_A Myomesin-1; immunoglobu 99.6 2.7E-15 9.1E-20 105.6 10.8 121 115-237 12-158 (207)
304 1fhg_A Telokin; immunoglobulin 99.6 7.2E-16 2.5E-20 103.4 7.3 83 115-198 51-133 (154)
305 2dm2_A Palladin; beta-sandwich 99.6 3.8E-15 1.3E-19 94.0 10.1 84 115-199 18-102 (110)
306 3cx2_A Myosin-binding protein 99.6 1.3E-14 4.3E-19 91.3 12.4 93 9-102 4-107 (108)
307 1x44_A Myosin-binding protein 99.6 7.3E-15 2.5E-19 91.5 11.2 91 9-106 7-99 (103)
308 1hxm_A Gamma-delta T-cell rece 99.6 6.4E-15 2.2E-19 105.1 12.2 168 14-189 6-200 (229)
309 3m45_A Cell adhesion molecule 99.6 4.3E-15 1.5E-19 93.4 10.1 98 6-105 3-108 (108)
310 2va4_A NCAM2, N-CAM 2, neural 99.6 3.5E-15 1.2E-19 103.6 10.6 117 115-235 14-133 (192)
311 1wit_A Twitchin 18TH IGSF modu 99.6 1.5E-15 5.2E-20 92.8 7.6 79 115-197 12-92 (93)
312 3u1s_H FAB PGT145 heavy chain; 99.6 3.8E-15 1.3E-19 109.0 11.1 175 17-195 31-261 (267)
313 2lvc_A Obscurin-like protein 1 99.6 3.8E-15 1.3E-19 90.2 9.2 78 8-88 3-82 (91)
314 1rhf_A Tyrosine-protein kinase 99.6 5.6E-15 1.9E-19 101.8 11.1 117 115-237 12-140 (182)
315 2yuv_A Myosin-binding protein 99.6 1.1E-14 3.7E-19 90.2 11.1 91 8-105 6-97 (100)
316 2cr6_A KIAA1556 protein, obscu 99.6 6.2E-16 2.1E-20 98.5 5.5 102 4-110 7-109 (115)
317 2v44_A NCAM2, neural cell adhe 99.6 1.3E-14 4.3E-19 100.6 12.6 121 115-238 12-138 (189)
318 3kvq_A Vascular endothelial gr 99.6 1.2E-15 4.1E-20 96.0 6.6 98 97-199 3-100 (108)
319 2e6p_A Obscurin-like protein 1 99.6 5.2E-15 1.8E-19 92.4 9.5 93 8-107 6-101 (104)
320 3caf_A Fibroblast growth facto 99.6 9.6E-16 3.3E-20 95.0 6.0 84 17-101 16-99 (100)
321 2edf_A Obscurin; beta-sandwich 99.6 3.5E-15 1.2E-19 93.0 8.5 93 8-107 7-99 (103)
322 2iep_A Muscle-specific kinase 99.6 2.3E-15 7.9E-20 104.6 8.5 120 115-237 17-141 (192)
323 2e7c_A Myosin-binding protein 99.6 4.6E-15 1.6E-19 94.9 9.2 81 115-198 34-114 (118)
324 2edn_A Myosin-binding protein 99.6 7.1E-15 2.4E-19 92.7 9.6 95 10-104 13-117 (118)
325 2wv3_A Neuroplastin; igcam, me 99.6 2.2E-14 7.6E-19 99.5 13.0 105 116-233 13-129 (190)
326 3irg_B Obscurin-like protein 1 99.6 3.5E-15 1.2E-19 93.7 7.9 82 115-198 23-104 (107)
327 2dku_A KIAA1556 protein; beta- 99.6 2.6E-14 8.9E-19 89.0 11.8 93 8-107 7-99 (103)
328 2vr9_A Roundabout 1, ROBO; imm 99.6 6.2E-15 2.1E-19 104.5 9.9 123 115-238 19-151 (217)
329 2dm3_A KIAA0992 protein, palla 99.6 1.2E-15 4E-20 96.4 5.5 85 115-200 19-103 (110)
330 2cpc_A KIAA0657 protein; immun 99.6 1.4E-14 4.6E-19 91.9 10.5 98 5-109 6-106 (113)
331 2edh_A Obscurin; structural ge 99.6 1.5E-14 5.3E-19 91.6 10.7 97 3-107 12-109 (113)
332 1zxq_A ICAM-2, intercellular a 99.6 4.6E-14 1.6E-18 96.2 13.6 166 11-187 4-173 (192)
333 1wwc_A Protein (NT-3 growth fa 99.6 1.7E-14 5.9E-19 92.2 10.9 96 98-198 2-100 (118)
334 3puc_A Titin; I-SET IG-like do 99.6 5.9E-15 2E-19 91.3 8.4 82 115-198 16-97 (99)
335 2e7b_A Obscurin; IG-like domai 99.6 1.6E-14 5.6E-19 89.9 10.0 92 8-106 7-98 (103)
336 3so5_A LIG-3, leucine-rich rep 99.6 1.2E-14 4.2E-19 91.8 9.6 99 3-101 4-111 (112)
337 1gxe_A Myosin binding protein 99.6 6.1E-15 2.1E-19 96.5 8.2 82 115-198 28-138 (139)
338 2k1m_A Myosin-binding protein 99.6 2.9E-14 1E-18 87.4 10.8 87 9-102 8-94 (95)
339 3ojm_B Fibroblast growth facto 99.6 6.8E-15 2.3E-19 105.1 9.2 117 115-232 29-154 (231)
340 3p2t_A Leukocyte immunoglobuli 99.6 1E-14 3.5E-19 101.7 9.8 116 116-237 15-139 (196)
341 2bk8_A Connectin, M1, titin he 99.6 4.6E-14 1.6E-18 86.9 11.7 82 115-198 11-93 (97)
342 2yuz_A Myosin-binding protein 99.6 1.3E-14 4.3E-19 89.8 8.7 78 115-198 17-94 (100)
343 1gxe_A Myosin binding protein 99.6 6E-15 2.1E-19 96.5 7.5 85 16-102 25-138 (139)
344 3grw_A Fibroblast growth facto 99.6 7E-15 2.4E-19 105.8 8.7 117 115-232 25-150 (241)
345 2d3v_A Leukocyte immunoglobuli 99.6 1E-14 3.4E-19 101.8 9.2 117 115-237 14-139 (196)
346 2ckn_A Basic fibroblast growth 99.6 1.5E-14 5E-19 88.7 8.7 76 115-197 19-94 (95)
347 2yr3_A Myosin light chain kina 99.6 2E-15 7E-20 93.4 4.8 78 115-197 21-98 (99)
348 3k0w_A Mucosa-associated lymph 99.6 1.4E-14 4.7E-19 102.8 9.6 112 115-237 28-159 (218)
349 2gi7_A GPVI protein; IG-like d 99.6 1.4E-14 4.7E-19 100.1 9.3 107 116-237 18-133 (184)
350 2eo9_A Roundabout homolog 1; b 99.6 1.6E-14 5.6E-19 92.3 9.0 81 115-199 18-98 (118)
351 2edj_A Roundabout homolog 2; K 99.6 1E-14 3.5E-19 90.4 7.7 80 115-198 18-97 (100)
352 2dlt_A Myosin binding protein 99.6 1E-14 3.5E-19 91.4 7.7 90 8-102 7-96 (106)
353 2lu7_A Obscurin-like protein 1 99.6 1.4E-14 4.8E-19 86.3 7.9 77 115-198 6-82 (84)
354 3bfo_A Mucosa-associated lymph 99.6 2.4E-14 8.1E-19 87.1 9.1 83 9-102 3-86 (91)
355 2cry_A KIN of IRRE-like protei 99.6 6.2E-16 2.1E-20 99.5 1.9 101 2-104 7-114 (122)
356 2dm7_A KIAA1556 protein; beta- 99.6 6.5E-14 2.2E-18 88.0 11.2 91 8-106 7-97 (108)
357 2edk_A Myosin-binding protein 99.6 3.3E-15 1.1E-19 92.8 5.1 91 8-105 7-101 (101)
358 3caf_A Fibroblast growth facto 99.6 3.5E-15 1.2E-19 92.5 5.2 82 115-197 18-99 (100)
359 2cry_A KIN of IRRE-like protei 99.6 5.3E-16 1.8E-20 99.9 1.3 103 94-199 4-113 (122)
360 1nct_A Titin; cell adhesion, g 99.6 4.6E-15 1.6E-19 92.9 5.3 82 115-198 24-105 (106)
361 1f2q_A High affinity immunoglo 99.6 2.3E-15 7.7E-20 103.3 4.2 109 115-237 14-127 (176)
362 2cr3_A Basic fibroblast growth 99.6 1.9E-14 6.5E-19 88.9 7.9 83 16-105 10-92 (99)
363 3sgj_C Human FCG3A receptor; r 99.6 2E-14 7E-19 100.9 9.0 110 115-238 17-131 (204)
364 3irg_A Titin; IG-like, titin, 99.6 1.8E-14 6.3E-19 89.2 7.9 82 115-198 15-98 (100)
365 1jbj_A CD3 epsilon and gamma e 99.5 7.2E-15 2.5E-19 101.7 6.6 106 118-237 12-145 (186)
366 2e6q_A Obscurin-like protein 1 99.5 7.1E-14 2.4E-18 87.6 10.4 92 8-106 7-108 (112)
367 3mj8_L Stimulatory hamster ant 99.5 6.4E-14 2.2E-18 98.9 11.6 120 115-237 10-157 (213)
368 4hwu_A Fibroblast growth facto 99.5 3.7E-14 1.3E-18 86.9 9.0 83 16-106 8-90 (95)
369 3qib_D 2B4 beta chain; IG doma 99.5 1.3E-14 4.6E-19 106.3 8.2 155 74-237 3-192 (270)
370 3bp6_B Programmed cell death 1 99.5 2E-14 7E-19 100.7 8.8 120 115-237 12-144 (202)
371 1gsm_A Madcam-1, mucosal addre 99.5 3.5E-14 1.2E-18 99.0 9.5 108 116-237 18-140 (210)
372 1vca_A VCAM-D1,2, human vascul 99.5 7.9E-14 2.7E-18 97.7 11.4 115 118-238 14-136 (202)
373 2v9r_A Roundabout homolog 1; p 99.5 1.1E-14 3.6E-19 102.8 6.9 122 115-237 19-153 (212)
374 2ifg_A High affinity nerve gro 99.5 2.5E-16 8.4E-21 119.7 -1.8 147 78-238 136-288 (347)
375 2dav_A SLOW MYBP-C, myosin-bin 99.5 1.5E-13 5.1E-18 87.6 11.3 84 115-199 17-111 (126)
376 1fnl_A Low affinity immunoglob 99.5 8.5E-15 2.9E-19 100.3 5.6 110 115-238 17-131 (175)
377 1f97_A Junction adhesion molec 99.5 2E-14 6.9E-19 101.3 7.6 117 115-237 11-147 (212)
378 1uct_A Immunoglobulin alpha FC 99.5 2.1E-14 7.3E-19 101.8 7.7 117 115-237 18-146 (218)
379 2cr6_A KIAA1556 protein, obscu 99.5 2.6E-15 9E-20 95.5 2.6 79 115-198 23-101 (115)
380 3rbg_A Cytotoxic and regulator 99.5 7.7E-14 2.6E-18 89.9 9.6 93 14-108 6-106 (124)
381 1gl4_B Basement membrane-speci 99.5 4.8E-14 1.6E-18 87.0 8.2 88 9-102 9-97 (98)
382 1pd6_A Cardiac MYBP-C;, myosin 99.5 1.2E-13 4.3E-18 85.9 9.8 88 8-102 14-103 (104)
383 3s35_X Vascular endothelial gr 99.5 6.4E-14 2.2E-18 90.0 8.7 93 18-111 17-118 (122)
384 2v5t_A NCAM2, N-CAM 2, neural 99.5 1.4E-14 4.9E-19 100.2 6.0 120 115-237 12-139 (189)
385 2xot_A Amphoterin-induced prot 99.5 5.4E-14 1.8E-18 107.3 9.6 104 16-139 253-360 (361)
386 1waa_A Titin; metal binding pr 99.5 1.2E-13 4.1E-18 84.1 9.3 77 115-198 15-91 (93)
387 2edh_A Obscurin; structural ge 99.5 1.2E-13 4E-18 87.5 9.7 98 92-198 6-104 (113)
388 3nl4_L Antigen binding fragmen 99.5 1.7E-13 5.7E-18 96.8 11.5 119 115-237 11-156 (213)
389 2r15_A Myomesin-1; sarcomeric 99.5 1.4E-13 5E-18 96.9 11.0 92 12-104 120-211 (212)
390 1z9m_A GAPA225; nectin-like, I 99.5 2.7E-13 9.2E-18 89.8 11.6 96 9-107 38-142 (145)
391 3s35_X Vascular endothelial gr 99.5 2.8E-14 9.7E-19 91.7 6.6 92 116-213 19-119 (122)
392 1hng_A CD2; T lymphocyte adhes 99.5 6.4E-14 2.2E-18 96.0 8.6 115 117-238 8-137 (176)
393 2ens_A Advanced glycosylation 99.5 2.8E-14 9.6E-19 87.6 6.0 84 8-102 9-94 (96)
394 4f80_A Butyrophilin subfamily 99.5 9.2E-14 3.2E-18 99.1 9.4 121 115-236 14-159 (226)
395 2lvc_A Obscurin-like protein 1 99.5 6.6E-14 2.3E-18 84.7 7.4 74 116-196 17-90 (91)
396 2yuv_A Myosin-binding protein 99.5 3.1E-13 1E-17 83.6 10.5 77 115-198 18-94 (100)
397 1gl4_B Basement membrane-speci 99.5 7.8E-14 2.7E-18 86.0 7.6 78 115-198 20-97 (98)
398 3tv3_L PGT128 light chain, IG 99.5 1.8E-13 6E-18 96.5 10.5 118 115-237 10-154 (211)
399 1nkr_A P58-CL42 KIR; inhibitor 99.5 1E-13 3.5E-18 97.0 9.1 119 115-237 17-147 (201)
400 1oll_A NK receptor; immune sys 99.5 1.7E-13 5.8E-18 94.9 10.0 117 116-238 14-139 (188)
401 3mtr_A N-CAM-1, NCAM-1, neural 99.5 5E-13 1.7E-17 94.5 12.6 119 115-236 28-157 (215)
402 2edn_A Myosin-binding protein 99.5 8E-14 2.8E-18 87.9 7.5 85 113-198 20-115 (118)
403 3cx2_A Myosin-binding protein 99.5 3.1E-13 1E-17 84.9 10.0 83 115-198 14-107 (108)
404 2eo1_A OBSCN protein, cDNA FLJ 99.5 2.6E-13 8.7E-18 84.3 9.5 81 18-105 20-100 (102)
405 1x44_A Myosin-binding protein 99.5 3.1E-13 1.1E-17 84.0 9.9 77 115-198 17-95 (103)
406 3m45_A Cell adhesion molecule 99.5 2.2E-13 7.4E-18 85.5 9.1 82 115-198 16-105 (108)
407 1nbq_A JAM, junctional adhesio 99.5 1.1E-13 3.7E-18 97.3 8.5 118 115-238 14-150 (209)
408 3d9a_L Light chain of hyhel10 99.5 3.2E-13 1.1E-17 95.3 10.9 119 115-237 11-155 (213)
409 3so5_A LIG-3, leucine-rich rep 99.5 3.2E-13 1.1E-17 85.2 9.6 83 115-197 20-111 (112)
410 3bfo_A Mucosa-associated lymph 99.5 2.1E-13 7.1E-18 82.8 8.4 73 115-198 13-86 (91)
411 1ugn_A LIR1, leukocyte immunog 99.5 4.1E-14 1.4E-18 98.8 5.9 117 115-237 14-140 (198)
412 2cr3_A Basic fibroblast growth 99.5 2.1E-13 7.2E-18 84.2 8.4 78 115-199 13-90 (99)
413 1lk3_L 9D7 light chain; antige 99.5 3.6E-13 1.2E-17 94.9 10.5 119 115-237 10-154 (210)
414 4acp_A IG gamma-1 chain C regi 99.5 2.6E-14 8.8E-19 102.6 4.6 154 80-237 1-173 (240)
415 1hnf_A CD2; T lymphocyte adhes 99.5 1.5E-13 5.3E-18 94.4 8.2 114 117-237 11-141 (182)
416 1sy6_A T-cell surface glycopro 99.5 1.9E-13 6.4E-18 95.9 8.5 106 117-237 15-152 (204)
417 3pv7_A B7-H6, IG-like domain-c 99.5 3.4E-14 1.2E-18 102.8 4.9 115 115-235 13-159 (248)
418 3ry4_A Low affinity immunoglob 99.5 2.2E-13 7.6E-18 92.7 8.6 110 115-238 14-128 (170)
419 3r06_A Anti-mouse CD3epsilon a 99.5 6.5E-13 2.2E-17 93.7 11.3 119 115-237 11-155 (213)
420 3b5h_A Cervical EMMPRIN, HAB18 99.5 1.3E-12 4.4E-17 90.0 12.5 99 2-102 76-182 (184)
421 3qr2_A Basigin; CD147, EMMPRIN 99.5 3.4E-13 1.2E-17 88.5 9.1 87 6-93 18-116 (137)
422 2v9t_A Roundabout homolog 1; s 99.5 4.1E-14 1.4E-18 90.3 4.3 96 6-104 6-110 (117)
423 2rgs_A I, IG gamma-2B heavy ch 99.5 4.8E-14 1.6E-18 100.1 4.9 119 117-237 23-160 (218)
424 2edf_A Obscurin; beta-sandwich 99.5 2.8E-13 9.5E-18 84.3 7.7 77 115-198 18-94 (103)
425 3s96_B 3B5H10 FAB light chain; 99.5 4.6E-13 1.6E-17 94.8 9.9 121 115-238 10-165 (218)
426 2vol_A Murine IGG FC; FC, zinc 99.5 6.6E-14 2.3E-18 98.5 5.2 119 117-237 15-152 (207)
427 4hwu_A Fibroblast growth facto 99.4 5.8E-13 2E-17 81.5 8.8 76 115-198 11-86 (95)
428 4dzb_B Vbeta2 (MAIT T cell rec 99.4 6.9E-13 2.4E-17 95.8 10.6 122 115-237 11-168 (246)
429 2eny_A Obscurin; beta-sandwich 99.4 2.9E-13 9.8E-18 84.3 7.5 78 115-198 18-96 (104)
430 2dlt_A Myosin binding protein 99.4 3.7E-13 1.2E-17 84.2 8.0 79 115-198 18-96 (106)
431 1dr9_A B7-1 (CD80), T lymphocy 99.4 1.6E-13 5.5E-18 96.0 6.9 119 116-238 5-149 (201)
432 2e6p_A Obscurin-like protein 1 99.4 5E-13 1.7E-17 83.3 8.3 76 116-198 21-96 (104)
433 3jz7_A MCAR, CAR, coxsackievir 99.4 1.5E-13 5E-18 96.9 6.5 98 2-104 114-213 (214)
434 2v5y_A Receptor-type tyrosine- 99.4 3.8E-12 1.3E-16 105.9 15.8 179 8-198 164-353 (731)
435 3s97_C Contactin-1; carbonic a 99.4 1E-13 3.6E-18 96.8 5.3 121 115-237 18-154 (201)
436 1ccz_A Protein (CD58); LFA-3, 99.4 2.1E-13 7.3E-18 92.9 6.0 115 116-237 6-131 (171)
437 2j6e_L IGM, FAB light chain; a 99.4 8.9E-13 3E-17 94.4 9.4 120 115-237 29-178 (234)
438 3nfj_J T cell receptor beta ch 99.4 3.2E-12 1.1E-16 92.2 12.2 122 115-237 11-167 (245)
439 2x1w_L Vascular endothelial gr 99.4 1.1E-12 3.6E-17 92.7 9.4 105 3-107 96-211 (213)
440 3sob_L Antibody light chain; b 99.4 2.4E-12 8.4E-17 92.2 11.4 120 115-238 34-179 (237)
441 1q0x_L FAB 9B1, light chain; a 99.4 2E-12 6.8E-17 91.2 10.7 120 115-237 10-158 (212)
442 2xzc_L FAB A.17 light chain; i 99.4 1.6E-12 5.5E-17 92.0 10.2 120 115-237 10-157 (216)
443 1ntl_A CRRY-IG; immunology, co 99.4 9.2E-12 3.2E-16 100.1 15.6 166 21-187 355-536 (551)
444 2edk_A Myosin-binding protein 99.4 9.9E-14 3.4E-18 86.0 3.3 77 115-198 18-98 (101)
445 2e7b_A Obscurin; IG-like domai 99.4 1.8E-12 6.1E-17 80.6 9.0 77 115-198 18-94 (103)
446 3sbw_C Programmed cell death 1 99.4 1.8E-12 6.1E-17 92.0 10.2 116 116-235 12-155 (222)
447 1p6f_A NKP46, natural cytotoxi 99.4 1.7E-12 5.7E-17 93.5 10.1 117 116-238 17-142 (242)
448 2pet_A Lutheran blood group gl 99.4 5.7E-13 1.9E-17 95.1 7.6 120 115-237 10-161 (231)
449 2cpc_A KIAA0657 protein; immun 99.4 2.1E-12 7E-17 81.7 9.3 85 116-212 24-108 (113)
450 2fbo_J V1V2;, variable region- 99.4 2.4E-13 8.3E-18 98.2 5.6 118 115-237 12-177 (250)
451 2ens_A Advanced glycosylation 99.4 3.2E-13 1.1E-17 82.9 5.3 73 115-198 20-94 (96)
452 2ny1_B T-cell surface glycopro 99.4 1.7E-13 5.8E-18 94.5 4.3 116 116-238 6-139 (184)
453 1pd6_A Cardiac MYBP-C;, myosin 99.4 1.8E-12 6E-17 80.7 8.5 77 115-198 26-103 (104)
454 2w59_A IGY FCU3-4; immunoglobu 99.4 1.8E-13 6.3E-18 97.9 4.6 120 116-237 24-161 (231)
455 3rbg_A Cytotoxic and regulator 99.4 2.4E-12 8.2E-17 82.8 9.3 82 115-198 11-100 (124)
456 1z9m_A GAPA225; nectin-like, I 99.4 4.3E-12 1.5E-16 84.0 10.7 82 115-199 48-138 (145)
457 2k1m_A Myosin-binding protein 99.4 3.1E-12 1.1E-16 78.2 9.3 77 115-198 18-94 (95)
458 3bkj_L WO2 IGG2A FAB fragment 99.4 4.1E-12 1.4E-16 92.1 11.3 119 115-237 44-193 (252)
459 1b6u_A KIR2DL3, P58 killer cel 99.4 1.8E-12 6E-17 94.1 9.1 136 3-145 98-241 (257)
460 3eow_R Poliovirus receptor; im 99.4 5.8E-13 2E-17 94.6 6.4 117 115-236 9-157 (221)
461 2if7_A SLAM family member 6; N 99.4 4.1E-13 1.4E-17 93.4 5.2 119 115-236 8-150 (193)
462 1nfd_E H57 FAB; complex (immun 99.4 5.8E-13 2E-17 93.9 6.0 120 115-237 9-156 (212)
463 3esu_F Antibody 14B7* light ch 99.4 7.5E-12 2.6E-16 90.5 12.0 117 115-233 14-170 (250)
464 2dku_A KIAA1556 protein; beta- 99.4 6.1E-12 2.1E-16 78.1 9.8 79 115-200 18-96 (103)
465 3pl6_D MBP peptide / T-cell re 99.4 6.8E-12 2.3E-16 91.7 11.3 121 115-237 36-189 (268)
466 1c1e_H Catalytic antibody 1E9 99.4 2.8E-12 9.5E-17 90.9 9.0 120 115-236 10-166 (219)
467 2v9t_A Roundabout homolog 1; s 99.4 5.9E-13 2E-17 84.8 4.9 83 115-198 19-108 (117)
468 1i1c_A IGG2A, IG gamma-2A chai 99.4 5.1E-13 1.7E-17 96.0 5.0 119 117-237 29-166 (239)
469 3r4d_A CEA-related cell adhesi 99.4 4.3E-12 1.5E-16 89.1 9.5 97 3-106 103-203 (208)
470 3mj6_A Junctional adhesion mol 99.4 3.3E-12 1.1E-16 93.3 9.2 117 115-234 15-159 (268)
471 4ei6_B Vbeta16 XV19 type II na 99.4 6.8E-12 2.3E-16 90.5 10.7 121 115-237 12-167 (245)
472 2wbj_D OB TCR; transmembrane, 99.4 3.6E-12 1.2E-16 93.8 9.3 122 115-237 34-193 (279)
473 3bqu_C 3H6 FAB light chain; be 99.4 6.6E-13 2.3E-17 95.0 5.1 119 115-237 33-177 (233)
474 2eo1_A OBSCN protein, cDNA FLJ 99.4 7.2E-12 2.5E-16 77.6 9.2 76 116-198 22-97 (102)
475 3c6l_A TCR 2W20 alpha chain; T 99.0 7.1E-14 2.4E-18 95.9 0.0 130 14-150 5-154 (185)
476 2dru_A Chimera of CD48 antigen 99.3 3.1E-12 1.1E-16 87.8 7.9 119 115-237 9-141 (180)
477 2dm7_A KIAA1556 protein; beta- 99.3 8.9E-12 3.1E-16 78.1 9.2 86 104-198 8-93 (108)
478 3rgv_A YAE62 TCR A chain; TCR, 99.3 1.7E-12 5.9E-17 89.8 6.2 163 13-183 4-185 (200)
479 1f3r_B FV antibody fragment; I 99.3 8.4E-12 2.9E-16 90.7 10.2 121 115-236 10-181 (257)
480 2ghw_B Anti-SARS SCFV antibody 99.3 8.4E-12 2.9E-16 90.1 10.1 121 115-236 12-177 (247)
481 1q9r_B S25-2 FAB (IGG1K) heavy 99.3 5E-12 1.7E-16 89.8 8.5 120 115-236 10-169 (222)
482 2eys_A NKT15; natural killer T 99.3 6.3E-12 2.1E-16 88.3 8.7 159 14-188 8-189 (210)
483 1nqb_A Single-chain antibody f 99.3 1.6E-11 5.4E-16 89.2 11.1 122 115-237 10-169 (256)
484 3uto_A Twitchin; kinase, muscl 99.3 1.1E-11 3.9E-16 99.7 11.1 91 9-101 482-572 (573)
485 1moe_A Anti-CEA MAB T84.66; an 99.3 1.1E-11 3.9E-16 89.0 10.1 117 115-233 11-158 (240)
486 2e6q_A Obscurin-like protein 1 99.3 2.9E-11 9.8E-16 75.7 10.5 78 114-198 17-104 (112)
487 3qr2_A Basigin; CD147, EMMPRIN 99.3 3.8E-12 1.3E-16 83.4 6.9 86 103-190 20-117 (137)
488 3d9a_H Heavy chain of hyhel10 99.3 5E-12 1.7E-16 89.0 7.9 119 115-236 10-160 (210)
489 1dee_B IGM RF 2A2; FAB-IBP com 99.3 2.6E-11 8.8E-16 86.2 11.5 121 115-237 10-170 (223)
490 1l6x_A Immunoglobulin gamma-1 99.3 1.6E-12 5.3E-17 91.5 5.1 118 118-237 16-152 (207)
491 3q5y_A TCR N15 beta; IG, T cel 99.3 1.9E-11 6.6E-16 87.8 10.6 121 115-237 12-165 (240)
492 2fbj_H IGA-kappa J539 FAB (hea 99.3 1.6E-11 5.4E-16 87.2 10.0 121 115-237 10-166 (220)
493 3omz_A Human vdelta1 gamma del 99.3 5E-12 1.7E-16 92.0 7.5 119 115-234 12-175 (259)
494 3auv_A SC-DSFV derived from th 99.3 1.3E-11 4.6E-16 90.6 9.7 118 115-234 22-174 (276)
495 2znx_A SCFV; fluorotryptohpan, 99.3 9.3E-12 3.2E-16 89.7 8.7 118 115-234 11-162 (242)
496 1op3_H FAB 2G12, heavy chain; 99.3 1E-11 3.6E-16 88.4 8.5 120 115-236 10-170 (225)
497 2p1y_A Bispecific alpha/beta T 99.3 1.3E-11 4.6E-16 88.5 9.1 118 115-234 10-165 (238)
498 1n26_A IL-6 receptor alpha cha 99.3 2.2E-10 7.4E-15 86.2 15.8 90 12-108 9-98 (325)
499 3ux9_B SCFV antibody; five hel 99.3 1.8E-11 6.2E-16 88.8 9.4 118 115-234 12-174 (256)
500 3zyj_A Leucine-rich repeat-con 99.3 5.1E-12 1.7E-16 99.0 6.8 92 9-106 341-436 (440)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3.2e-33 Score=207.16 Aligned_cols=227 Identities=25% Similarity=0.419 Sum_probs=181.5
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+.++|.|.+. +.|.+.+.|++++..+....++...... ....|.|.+++.+|+|.|+|.+
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVT-GTAPIKITWAKDNREIRPGGNYKMTLVE-NTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEE-SSSCCEEEEEETTEECCSSSSEEEEEET-TEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEE-cCCCCEEEEEECCEECcCCCcEEEEEcC-CEEEEEEecCCcccCEEEEEEE
Confidence 4688888888888999999999999996 7777899999999998876665544322 3578999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEE
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLS 166 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (243)
.+..+..+..+.|.|..+|.+.........+..|+.+.|.|.+ .|.|.+.+.|++++..+.......... ......|.
T Consensus 81 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~ 158 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFRMSF-VESVAVLE 158 (284)
T ss_dssp EETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCCSSSEEEEE-ETTEEEEE
T ss_pred EECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEE-eeeCCCEEEEEECCEECcCCCcEEEEE-cCCEEEEE
Confidence 9998888888899999888765443333446789999999999 588999999999999988765544332 23357899
Q ss_pred EeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecC--CCCCeeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 167 INSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLN--RLPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 167 i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
|.++..+|+|.|+|.|.|..|.....+.|.|...+. ..|....+..+..+.+.|.....| .+.|+++|..+
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~ 233 (284)
T 2rik_A 159 MYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKREL 233 (284)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEE
T ss_pred ECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEEC
Confidence 999999999999999999999988888998883221 122233455677888899876654 89999998654
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=5.1e-32 Score=218.78 Aligned_cols=225 Identities=23% Similarity=0.465 Sum_probs=180.2
Q ss_pred eeEEEecCCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCe
Q psy11132 2 LVIFSTVPPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG 80 (243)
Q Consensus 2 ~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 80 (243)
..|.|..||.+... .....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|
T Consensus 283 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~-g~P~p~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~i~~v~~~D~G 360 (570)
T 3b43_A 283 AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG-GSPEIKVLWYKDETEIQESSKFRMSFVE-SVAVLEMYNLSVEDSG 360 (570)
T ss_dssp EEECCBCCCEEEECCCSBCCEESSCEEEEEEEEE-SSSSCEEEEEETTEECCCSSSEEEEEET-TEEEEEEESCCGGGCE
T ss_pred EEEEeecCCcccccCCCccEEcCCCcEEEEEEEe-eCCCCEEEEeECCEECCCCCcEEEEEEC-CEEEEEECCCCcccCE
Confidence 35667788876654 3345578999999999995 8888999999999999877665544322 2568999999999999
Q ss_pred eEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 81 NYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 81 ~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
.|+|.|.|..|.....+.|.|..+|.+...+.. ..+.+|+.+.|.|.+ .|.|.+.+.|++++..+.....+.... +.
T Consensus 361 ~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~-~~~~~G~~v~l~C~~-~g~P~p~v~W~k~g~~l~~~~~~~~~~-~~ 437 (570)
T 3b43_A 361 DYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHP-VETLKGADVHLECEL-QGTPPFQVSWHKDKRELRSGKKYKIMS-EN 437 (570)
T ss_dssp EEEEEEEBTTBCCEEEEEECEECCCEECSCCCC-EEECTTCCEEEEEEE-ESSSSCCCEEEETTEECCSSSSEEEEE-ET
T ss_pred EEEEEEEeCCCEEEEEEEEEecCCCeeecCCCc-eeecCCCEEEEEEEE-ecCCCCEEEEEECCEECcCCCCEEEEE-cC
Confidence 999999999999888899999988876654433 456789999999999 699999999999999988766554433 23
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeee-------eccceeeeccCcccc--cccceE
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYSF--EQDSWM 231 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~--~~~~W~ 231 (243)
....|.|.++..+|+|.|+|.|.|..|.....+.|.|. .||.+.. ..++.+.+.|...+. +.+.|+
T Consensus 438 ~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~-----~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~ 512 (570)
T 3b43_A 438 FLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK-----APPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWF 512 (570)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC-----CCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEE
T ss_pred CEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec-----cCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEE
Confidence 34679999999999999999999999999888888888 6666543 345667778876554 489999
Q ss_pred EeCCe
Q psy11132 232 IDNEN 236 (243)
Q Consensus 232 ~~~~~ 236 (243)
++|..
T Consensus 513 k~~~~ 517 (570)
T 3b43_A 513 KDKGE 517 (570)
T ss_dssp ETTEE
T ss_pred eCCeE
Confidence 99744
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=8.8e-32 Score=217.38 Aligned_cols=221 Identities=27% Similarity=0.468 Sum_probs=178.6
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+. +.|++.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.|.
T Consensus 196 ~pp~~~~~p~~~~v~~G~~~~l~C~~~-g~p~p~i~W~k~g~~i~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~ 273 (570)
T 3b43_A 196 VPPFFDLKPVSVDLALGESGTFKCHVT-GTAPIKITWAKDNREIRPGGNYKMTLVE-NTATLTVLKVTKGDAGQYTCYAS 273 (570)
T ss_dssp CCCEEEECCCCBCCBSBSCEEEEEEEE-SSSCCEEEEEETTEECCTTSSEEEEEET-TEEEEEESSBCGGGCEEEEEEEE
T ss_pred CCCccccCCceeEecCCCeEEEEEEEE-ECCCCEEEEEECCEECcCCCcEEEEEEC-CEEEEEEcccCcccCEEEEEEEE
Confidence 467777777778899999999999995 7788899999999998876665544322 24689999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEE
Q psy11132 88 NMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSI 167 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i 167 (243)
|..|..+..+.|.|..+|.+.........+..|+.+.|.|.+ .|.|.+.+.|++++..+........... .....|.|
T Consensus 274 N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~P~p~v~W~k~~~~l~~~~~~~~~~~-~~~~~L~i 351 (570)
T 3b43_A 274 NVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFRMSFV-ESVAVLEM 351 (570)
T ss_dssp ETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEE-ESSSSCEEEEEETTEECCCSSSEEEEEE-TTEEEEEE
T ss_pred CCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEE-eeCCCCEEEEeECCEECCCCCcEEEEEE-CCEEEEEE
Confidence 999988888999998888765443333456789999999999 6999999999999999887665544322 23567999
Q ss_pred eecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCee-------eeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 168 NSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSY-------TLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 168 ~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.++..+|+|.|+|.|.|..|....++.|.|. .||.+ ....+..+.+.|...+.| .++|+++|..+
T Consensus 352 ~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~-----~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l 425 (570)
T 3b43_A 352 YNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-----EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKREL 425 (570)
T ss_dssp ESCCGGGCEEEEEEEEBTTBCCEEEEEECEE-----CCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEEC
T ss_pred CCCCcccCEEEEEEEEeCCCEEEEEEEEEec-----CCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEEC
Confidence 9999999999999999999999888999888 44443 344577788888776554 89999998653
No 4
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.3e-31 Score=200.44 Aligned_cols=223 Identities=23% Similarity=0.407 Sum_probs=159.7
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee-eeceEEEEeecCC-CCCeeEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD-QYNSMLVIDSVSA-RHSGNYSC 84 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~-~d~G~Y~C 84 (243)
..||.+...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++..+... +....... .....|.|.+++. +|+|.|+|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~-g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQAT-GDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEE-CSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEE-EeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 4688888888889999999999999995 7788899999999888553 33332222 2237899999998 99999999
Q ss_pred EEEeCCCcceeEEEEEEEcCCC-------ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe-eEE
Q psy11132 85 TVRNMVAEDTQVQRLIVNVPPK-------IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV-NVS 156 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~p~-------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~-~~~ 156 (243)
.+.+..+..+..+.|.|..++. +...+ ....+..|+.+.|.|.+ .|.|.+.+.|++++..+...... ...
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~-~~~~v~~g~~v~l~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGP-QLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGGCCTTCCEEEECC-CCEEEETTSCEEECCEE-ECSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred EEECCCCeEEEEEEEEEeccccCCCCCCeeecCC-ccEEEeCCCeEEEEEEC-ccCCCCeEEEEECCEECcCCCCcceEE
Confidence 9999988888888899886532 22211 22346789999999999 68999999999999988653221 111
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCcceeee-EEEEEEeecCCCCCee-------eeeccceeeeccCccccc--
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS-SKLQVKGNLNRLPPSY-------TLVFSQASYMSTSYYSFE-- 226 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~-~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~~-- 226 (243)
. ...+.|.|.++..+|+|.|+|.|.|..|..... ..+.|... ..+|.+ .+..+..+.+.|...+.|
T Consensus 160 ~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~--~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p 235 (304)
T 2yd9_A 160 Q--LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ--NVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP 235 (304)
T ss_dssp E--CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC--CEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC
T ss_pred e--CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee--ccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC
Confidence 1 113479999999999999999999999876543 55555421 123333 345677788899876554
Q ss_pred ccceEEeCCee
Q psy11132 227 QDSWMIDNENY 237 (243)
Q Consensus 227 ~~~W~~~~~~~ 237 (243)
.+.|+++|..+
T Consensus 236 ~v~W~~~~~~l 246 (304)
T 2yd9_A 236 YVKWMQGAEDL 246 (304)
T ss_dssp EEEEEETTEEC
T ss_pred EEEEEECCEEC
Confidence 89999998654
No 5
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=209.66 Aligned_cols=220 Identities=15% Similarity=0.146 Sum_probs=162.0
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEe-----eeeceEEEEeecCC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHV-----DQYNSMLVIDSVSA 76 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~ 76 (243)
+.|.+..+|.+ .+....+.+|+.+.|.|.+..+.|.+.+.|++++..+........... ......|.|.+++.
T Consensus 222 ~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 299 (527)
T 3qs9_E 222 FTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVAR 299 (527)
T ss_dssp EEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCG
T ss_pred EEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCc
Confidence 45667777766 445678899999999999954788889999999988765433322111 11245799999999
Q ss_pred CCCeeEEEEEEeCCCcceeEEEEEEEcCCCcccccc-CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeE
Q psy11132 77 RHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAF-PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~ 155 (243)
+|+|.|+|.|.|. ....+.|.|..+|.+...+. ....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+.......
T Consensus 300 ~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~k~g~~l~~~~~~~- 374 (527)
T 3qs9_E 300 NDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF-KAYPQIRCTWTFSRKSFPCEQKGL- 374 (527)
T ss_dssp GGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEE-EEESCCEEEEEETTEEEECBCCBC-
T ss_pred ccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEE-EecCCCEEEEEECCEECcCCcccc-
Confidence 9999999999887 56677888887776543332 12457789999999999 689999999999999886543321
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCccccc--ccceEEe
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYSFE--QDSWMID 233 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~ 233 (243)
.....|.|.++..+|+|.|+|.|.|..|....++.|.|. .||.+...+... .+.|...+.| .+.|+++
T Consensus 375 ----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~-----~~P~i~~~~~~~-~l~C~a~g~P~p~i~W~~~ 444 (527)
T 3qs9_E 375 ----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR-----RKPQVLAEASAS-QASCFSDGYPLPSWTWKKC 444 (527)
T ss_dssp ----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------CCCEEEECCCCE----EEEECSSCCEEEEECC
T ss_pred ----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe-----cCCeEEEeCCCC-EEEEEEEEEcCCeEEEEEC
Confidence 124678999999999999999999999999889999998 888887766544 4688776654 8999988
Q ss_pred CCeeE
Q psy11132 234 NENYV 238 (243)
Q Consensus 234 ~~~~~ 238 (243)
+....
T Consensus 445 ~~~~~ 449 (527)
T 3qs9_E 445 SDKSP 449 (527)
T ss_dssp C----
T ss_pred CCCcC
Confidence 76543
No 6
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=2.5e-30 Score=192.20 Aligned_cols=225 Identities=19% Similarity=0.289 Sum_probs=162.7
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE-CCeeecC-CCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLK-DGRYLDN-SAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~-~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
||.+...+....+.+|+.+.|.|.+.+..+.+.+.|++ +|..+.. ..++.+.........|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 66777778888899999999999996333468999999 7776654 344444433334678999999999999999999
Q ss_pred EeCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 87 RNMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 87 ~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
.+..+. .+..+.|.|..+|.+...+.. ..+.+|+.+.|.|.+ .+.|.+.+.|++++..+........... ....|
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~-~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~L 157 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTP-QEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVL--SNNYL 157 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCSS-EEEETTSCEEECCEE-ECSSCCEEEEEETTSCSSTTCCTTEEEC--TTSCE
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCCc-ccccCCCeEEEEEEe-ccCCCCEEEEEECCEEcccCCCceEEEc--cCCcE
Confidence 998754 456778888777665543322 457789999999999 5889999999999988754322221111 13569
Q ss_pred EEeecCCCCCeeEEEEEEccCcce--eeeEEEEEEeecC--C--CCCeeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQA--RYSSKLQVKGNLN--R--LPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~~--~~~~~l~v~~~~~--~--~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.|.++..+|+|.|+|.|.|..+.. ...+.+.|...+. . .+....+..+..+.+.|...+.| .+.|+++|..+
T Consensus 158 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~ 237 (291)
T 1qz1_A 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPI 237 (291)
T ss_dssp EETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEEC
T ss_pred EEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEEC
Confidence 999999999999999999976443 3445566652111 0 01122345577888999876554 89999998754
No 7
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.97 E-value=5.9e-30 Score=179.64 Aligned_cols=188 Identities=20% Similarity=0.244 Sum_probs=150.3
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC-CceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS-AALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+... .++...........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVT-GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEE-CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEe-ecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 578888888888999999999999995 7788899999999988653 34444433333458999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCcccccc----CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccce
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAF----PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 162 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~----~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 162 (243)
.+..+.....+.|.|..+|.+..... ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.......... ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~-~~~~ 159 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNNGHYQVIV-TRSF 159 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEE-EEESCCEEEEEESSCEECSSSSCEEEE-CSSE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEE-EecCCCcEEEEECCEEeecCCCEEEEE-cCCc
Confidence 99888878888888887665432211 11345679999999999 588999999999999887655444332 2335
Q ss_pred eEEEEee-cCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 163 SLLSINS-VSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 163 ~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..|.|.+ +..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 160 ~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 160 TSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 7899999 99999999999999999998888888876
No 8
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.97 E-value=1.8e-29 Score=179.17 Aligned_cols=186 Identities=25% Similarity=0.414 Sum_probs=148.1
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec-CCCceEEEEeeeeceEEEEeecCC-CCCeeEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD-NSAALSITHVDQYNSMLVIDSVSA-RHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~ 85 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+. ...++...........|.|.+++. .|+|.|+|.
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAAR-GDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEE-CSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEc-cCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 588888888889999999999999995 77888999999999886 445555444333347899999999 999999999
Q ss_pred EEeCCCc-ceeEEEEEEEcCCC-------ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEe
Q psy11132 86 VRNMVAE-DTQVQRLIVNVPPK-------IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 86 ~~~~~~~-~~~~~~l~v~~~p~-------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~ 157 (243)
+.+..+. .+..+.|.|...+. +...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+..........
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~ 161 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGP-GTRVIEVGHTVLMTCKA-IGNPTPNIYWIKNQTKVDMSNPRYSLK 161 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECC-CCEEEETTCCEEECCEE-ECSSCCEEEEEETTEECCTTSTTEEEE
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCC-CceEeecCCeEEEEEEe-ccCCCCeEEEEECCeEcccCCCeEEcc
Confidence 9998887 77788888887532 22211 22345679999999999 689999999999999887643322211
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCcceeee-EEEEEEee
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS-SKLQVKGN 200 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~-~~l~v~~~ 200 (243)
.+.|.|.++..+|+|.|+|.|.|..|..... +.|.|...
T Consensus 162 ----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 162 ----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp ----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred ----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 3489999999999999999999999988765 88888843
No 9
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.97 E-value=1.7e-29 Score=179.43 Aligned_cols=189 Identities=27% Similarity=0.389 Sum_probs=143.4
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeec-CCCCCeeEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSV-SARHSGNYSCT 85 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~ 85 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.................|.|.++ +.+|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQAT-GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEE-EESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEe-eCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 4678888888888899999999999996 778889999999998876543332222223567999999 59999999999
Q ss_pred EEeCCCcceeEEEEEEEcCC-------CccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC--eeEE
Q psy11132 86 VRNMVAEDTQVQRLIVNVPP-------KIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP--VNVS 156 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p-------~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~--~~~~ 156 (243)
+.+..+.....+.|.|...+ .+... .....+..|+.+.|.|.+ .|.|.+.+.|++++..+..... ....
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~-~~~~~~~~g~~v~l~C~~-~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 160 (212)
T 2yd6_A 83 ASNNVGEISVSTRLTVLREDQIPRGFPTIDMG-PQLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDTSNNNGRIKQ 160 (212)
T ss_dssp EEETTEEEEEEEEEEEECGGGCCTTCCEEEEC-CCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEEC------CCEEE
T ss_pred EEcCCCcEEEEEEEEEeccCccCCCcceeecC-CcceeEecCCCEEEEEEe-cCCCCCeEEEEECCccccCcCCCceEEE
Confidence 99998887788888887642 22211 122346679999999999 5899999999999998875421 1111
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEE
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 198 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~ 198 (243)
......+.|.|.++..+|+|.|+|.|.|..|... ..+.+.+.
T Consensus 161 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 161 LRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 1223357899999999999999999999999875 45778777
No 10
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=9.6e-29 Score=183.05 Aligned_cols=192 Identities=24% Similarity=0.482 Sum_probs=157.5
Q ss_pred eeEEEecCCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCe
Q psy11132 2 LVIFSTVPPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG 80 (243)
Q Consensus 2 ~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 80 (243)
+.|.|..+|.+... .....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+....... ....|.|.+++.+|+|
T Consensus 91 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G 168 (284)
T 2rik_A 91 AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG-GSPEIKVLWYKDETEIQESSKFRMSFVE-SVAVLEMYNLSVEDSG 168 (284)
T ss_dssp EEEEEECCCEEEECCCSEEEEETTCCEEEEEEEE-SSSCCEEEEEETTEECCCSSSEEEEEET-TEEEEEECSCCGGGCE
T ss_pred EEEEccCCCcccccCCCceEecCCceEEEEEEEe-eeCCCEEEEEECCEECcCCCcEEEEEcC-CEEEEEECCCCcccCE
Confidence 45778888876655 3345688999999999995 7788899999999998876655543322 3578999999999999
Q ss_pred eEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 81 NYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 81 ~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
.|+|.+.+..+.....+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.+.|++++..+.......... ..
T Consensus 169 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~ 245 (284)
T 2rik_A 169 DYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHP-VETLKGADVHLECEL-QGTPPFQVSWHKDKRELRSGKKYKIMS-EN 245 (284)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCBCCSCCCC-EEECTTCCEEEEEEC-BSSSCCEEEEEETTEEECBTTTEEEEE-ET
T ss_pred EEEEEEEcCCCceeEEEEEEEecCCcceeCCCc-ceecCCCeEEEEEEE-EecCCCEEEEEECCEECcCCCCEEEEE-cC
Confidence 999999999998888899999988876654432 456789999999999 689999999999999988766554433 23
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
....|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 246 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 246 FLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 35689999999999999999999999999988888875
No 11
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=2.7e-30 Score=206.87 Aligned_cols=223 Identities=16% Similarity=0.212 Sum_probs=167.6
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCce-eEEEECCeee--cCCCceEEEE--eeeeceEEEEeecCCCCCeeE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLT-IKWLKDGRYL--DNSAALSITH--VDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~-v~W~~~~~~~--~~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y 82 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+. +.|++++..+ .......... .......|.|.+++.+|+|.|
T Consensus 210 ~~p~i~~~~~~~~v~~G~~v~L~C~~~-g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 288 (524)
T 2ec8_A 210 AVPVVSVSKASYLLREGEEFTVTCTIK-DVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVF 288 (524)
T ss_dssp SCCEEECSCSEEEEETTSCEEEEEEEE-ESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEE
T ss_pred CCCcEEecCCcceEEcCCcEEEEEEEe-cCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEE
Confidence 678888877778899999999999996 666554 9999999873 2222211110 112357899999999999999
Q ss_pred EEEEEeCCCcceeEEEEEEEcCCCcccccc--CCCCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEecCCCCCeeEEeec
Q psy11132 83 SCTVRNMVAEDTQVQRLIVNVPPKIESFAF--PFDGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSPRFPVNVSDLD 159 (243)
Q Consensus 83 ~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~ 159 (243)
+|.+.|..+.....+.|.|..+|.+...+. ....+..|+.+.|.|.+ .|.|.+. +.|++++..+............
T Consensus 289 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~-~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~ 367 (524)
T 2ec8_A 289 MCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEY-EAFPKPEHQQWIYMNRTFTDKWEDYPKSEN 367 (524)
T ss_dssp EEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEE-EEESCCCEEEEESSSCBCSSSBCCEESCCS
T ss_pred EEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEE-eecCCCcEEEEEECCeeccCCccceeEEcc
Confidence 999999999888889999998887665432 12457899999999999 6889888 9999999988765422211111
Q ss_pred c----ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeec--cceeeeccCccccc--ccceE
Q psy11132 160 S----FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVF--SQASYMSTSYYSFE--QDSWM 231 (243)
Q Consensus 160 ~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~--~~~W~ 231 (243)
. ..+.|.|.++..+|+|.|+|.|.|..|....++.|.|. .+|.+...+ ... .+.|...+.| .++|+
T Consensus 368 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~-----~~P~i~~~~~~~~g-~l~C~~~g~P~p~i~W~ 441 (524)
T 2ec8_A 368 ESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVN-----TKPEILTYDRLVNG-MLQCVAAGFPEPTIDWY 441 (524)
T ss_dssp SSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC-----EEEEEEEEECCSSS-CEEEEEEEESCCEEECC
T ss_pred CCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEe-----cCCeEeecccCcCc-EEEEEEEeecCCEEEEE
Confidence 1 35789999999999999999999999998888999888 566655433 112 7888776654 89999
Q ss_pred EeCCeeE
Q psy11132 232 IDNENYV 238 (243)
Q Consensus 232 ~~~~~~~ 238 (243)
++|..+.
T Consensus 442 ~~~~~~~ 448 (524)
T 2ec8_A 442 FCPGTEQ 448 (524)
T ss_dssp CC-----
T ss_pred ECCCccc
Confidence 9986653
No 12
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.97 E-value=9.9e-30 Score=178.03 Aligned_cols=186 Identities=22% Similarity=0.368 Sum_probs=146.9
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC--ceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA--ALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... +..... ......|.|.+++..|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHIS-GFPVPEVSWFRDGQVISTSTLPGVQISF-SDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEE-EESCCEEEEEESSSBCCTTTSTTCEEEE-ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEE-ecCCCEEEEEECCEEcccccCCceEEEe-CCCEEEEEECCCCcccCEEEEEE
Confidence 467777777888899999999999995 77777999999998886543 333322 22357899999999999999999
Q ss_pred EEeCCCcceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccce
Q psy11132 86 VRNMVAEDTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 162 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 162 (243)
+.+..+.....+.|.|.. +|.+.... ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.......... .+..
T Consensus 82 ~~n~~~~~~~~~~l~v~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~ 158 (194)
T 2a38_A 82 ATNGSGQATSTAELLVKAETAPPNFVQRL-QSMTVRQGSQVRLQVRV-TGIPTPVVKFYRDGAEIQSSLDFQISQ-EGDL 158 (194)
T ss_dssp EEETTEEEEEEEEEEEECCCEEEEEEECC-CCEEECTTEEEEEEEEE-EEESCCEEEEEETTEECCCSSSEEEEE-ETTE
T ss_pred EEcCCceEeEEEEEEEccCCCCCEEEeCC-ccEEEcCCCEEEEEEEE-EEecCCeEEEEECCEECCCCCcEEEEE-cCCE
Confidence 999888777777888874 33332222 22457789999999999 688999999999999988765554433 2334
Q ss_pred eEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 163 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 163 ~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 159 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 159 YSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 579999999999999999999999998888888763
No 13
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.6e-29 Score=177.31 Aligned_cols=188 Identities=20% Similarity=0.302 Sum_probs=152.0
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+....... ....|.|.+++.+|+|.|+|.+
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIV-GRPLPDIKWYRFGKELIQSRKYKMSSDG-RTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEE-EESCCEEEEEETTEEECCCSSEEEEESS-SEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEe-cCCCCEEEEEECCEECCCCccEEEEeCC-CEEEEEEecCCccCCEEEEEEE
Confidence 4578888888888999999999999995 6777899999999998877666554332 2458999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCcccccc--CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeE
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAF--PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSL 164 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 164 (243)
.+..+.....+.|.|..+|....... ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.......... ......
T Consensus 83 ~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~-~~~~~~ 160 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMY-IGRPVPAMTWFHGQKLLQNSENITIEN-TEHYTH 160 (197)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEE-CSSEEE
T ss_pred ECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEE-eeeeCCeeEEeECCEECCCCCceEEEE-cCCEEE
Confidence 99888877788888877665443211 11345689999999999 589999999999999988766554433 233478
Q ss_pred EEEeecCC-CCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 165 LSINSVSA-AHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 165 l~i~~~~~-~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
|.|.++.. +|+|.|+|.|.|..|.....+.|.|.
T Consensus 161 L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 161 LVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp EEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 99999985 89999999999999999999988887
No 14
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.97 E-value=1.8e-28 Score=171.16 Aligned_cols=179 Identities=22% Similarity=0.313 Sum_probs=141.0
Q ss_pred cCCCccCCCCCccccc-CCeEEEEEEeeCCCCC--ceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 8 VPPKLSPTNPERTLNV-GERASLICSITKGDIP--LTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~-g~~~~l~C~~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
.||.+...+ ...+.+ |+.+.|.|.+. +.+. +.+.|++++..+....... ....|.|.+++.+|+|.|+|
T Consensus 2 ~~P~i~~~~-~~~v~~~G~~v~l~C~~~-~~~~~~~~v~W~~~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C 73 (190)
T 2wv3_A 2 NEPRIVTSE-EVIIRDSLLPVTLQCNLT-SSSHTLMYSYWTKNGVELTATRKNA------SNMEYRINKPRAEDSGEYHC 73 (190)
T ss_dssp -CCEEEECC-CEECCCSSSCEEEEEEEE-ECSSCEEEEEEEETTEECTTCCBCC------SEEEEEESSCCGGGCEEEEE
T ss_pred CCCcccccc-eEEEccCCceEEEEEEec-cCCCCceEEEEEECCEECcccceEe------ccEEEEEecCCcccCEEEEE
Confidence 477777644 455666 99999999996 5554 7999999999887654322 25789999999999999999
Q ss_pred EEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEe--CCEecC---CCCCeeEEeec
Q psy11132 85 TVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK--DGKPLS---PRFPVNVSDLD 159 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~--~~~~~~---~~~~~~~~~~~ 159 (243)
.+.+. +.....+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.+.|++ ++..+. ....... ...
T Consensus 74 ~~~n~-~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~-~~~ 149 (190)
T 2wv3_A 74 VYHFV-SAPKANATIEVKAAPDITGHKRS-ENKNEGQDAMMYCKS-VGYPHPEWMWRKKENGVFEEISNSSGRFFI-INK 149 (190)
T ss_dssp EEEET-TEEEEEEEEEEECCCEEEEECSE-EEEETTSCEEEEEEE-ECSSCCEEEEEEEETTEEEECCCTTSCEEE-EEC
T ss_pred EEEeC-CcccccEEEEEecCCcccccCCc-ceeeCCCcEEEEEEe-CccCCCceEEEEcCCCceeeeecCCCeEEE-ecC
Confidence 99998 77888889999988877654332 457789999999999 689999999999 777654 2222222 223
Q ss_pred cceeEEEEeecC-CCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 160 SFSSLLSINSVS-AAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 160 ~~~~~l~i~~~~-~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
...+.|.|.++. .+|+|.|+|.|.|..|....++.|.|.
T Consensus 150 ~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 150 ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 335689999999 799999999999999999888888876
No 15
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.97 E-value=1.6e-28 Score=172.13 Aligned_cols=180 Identities=18% Similarity=0.278 Sum_probs=141.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCc--eEEEEeee------eceEEEEeecCCCCC
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAA--LSITHVDQ------YNSMLVIDSVSARHS 79 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~------~~~~l~i~~~~~~d~ 79 (243)
.||.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+..... ..+..... ....|.|.+++..|+
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 3788888888999999999999999953677789999999998876532 22221111 046899999999999
Q ss_pred eeEEEEEEeCCCcc-eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCeeEEe
Q psy11132 80 GNYSCTVRNMVAED-TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 80 G~Y~C~~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~ 157 (243)
|.|+|.+.+..+.. +..+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+ .+.|++++..+......
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~~---- 154 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPED-RTVAANTPFNLSCQA-QGPPEPVDLLWLQDAVPLATAPGH---- 154 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCC-EEECTTCCEEEEEEE-ECSSCCCEEEEEESSCBSSSSTTS----
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCc-EEEcCCCEEEEEeEC-CCCCCCCEEEEEECCEeccCCCCc----
Confidence 99999999977653 44588888888766543332 567789999999999 588988 99999999988765432
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEE
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQV 197 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v 197 (243)
.....|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 155 --~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 --GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp --SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 235779999877 78999999999999885 6888877
No 16
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=8.7e-29 Score=183.85 Aligned_cols=223 Identities=17% Similarity=0.259 Sum_probs=160.7
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE-CCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLK-DGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.+|.+...+....+.+|+.+.|.|.+. +.|. .+.|++ ++..+....++...... ....|.|.+++.+|+|.|+|.+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~-~~p~-~v~W~~~~g~~~~~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAI-GEPE-SIDWYNPQGEKIISTQRVVVQKEG-VRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEE-SCCS-EEECBCTTCCBCCCBTTEEEEEET-TEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEe-CCCC-ceEEECCCCcCccCCCcEEEecCC-CEEEEEEccCCcccCEEEEEEE
Confidence 578888888888999999999999996 6564 899999 67777666666544322 2468999999999999999999
Q ss_pred EeCCCcc-eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 87 RNMVAED-TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 87 ~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
.+..+.. +..+.|.|..+|.+...+.. ..+.+|+.+.|.|.+ .+.|.+.+.|++++..+........... ....|
T Consensus 80 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~-~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~L 155 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIYQKLTFREVVSP-QEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAML--ANNNL 155 (291)
T ss_dssp ECSSSCEEEEEEEEEEECCCBCCSCCCS-EEEETTSCEEECCCC-BCSSCCEEEEECC----CBCCCSSEEEC--TTSCE
T ss_pred ecccCceEEEEEEEEecCCcceEeCCCC-hhhcCCCCEEEEEEE-ccCCCCEEEEEECCccccccCCceEEEc--cCCCE
Confidence 9987764 55677888877765543332 456789999999999 6889999999999987764222111111 13469
Q ss_pred EEeecCCCCCeeEEEEEEccCccee--eeEEEEEEeecCCC-CC---eeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQAR--YSSKLQVKGNLNRL-PP---SYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~~~--~~~~l~v~~~~~~~-~p---~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.|.++..+|+|.|+|.+.|..+... ..+.+.+...+... ++ ...+..+..+.+.|.....| .+.|+++|..+
T Consensus 156 ~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~ 235 (291)
T 2wim_A 156 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLI 235 (291)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEEC
T ss_pred EEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEEC
Confidence 9999999999999999999875443 44555555222111 11 22344577889999887654 89999998654
No 17
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=195.60 Aligned_cols=224 Identities=14% Similarity=0.200 Sum_probs=159.8
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..+|.+... .+..+.+|+.+.|.|.+.+..|.+.+.|++++..+....++.+. .....|.|.+++.+|+|.|+|.+
T Consensus 5 ~~~P~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~ 80 (317)
T 2y25_A 5 FTGPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK---DGICTLLITEFSKKDAGIYEVIL 80 (317)
T ss_dssp SSCCEEEEE-EEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC--------CCEEEEETTCCSTTCSCEEEEE
T ss_pred cCCCcEeee-eeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE---CCeEEEEEccCCcccCeEEEEEE
Confidence 457777643 35789999999999998644477899999999998866554433 23578999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecC----------CCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHG----------DPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~----------~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
.+..+.....+.|.|..+|.+...... ..+..|+.+.|.|.+ .+ .|.+.+.|++++..+.........
T Consensus 81 ~n~~g~~~~~~~l~v~~~~~~~~~~~~-~~~~~g~~~~l~c~~-~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 158 (317)
T 2y25_A 81 KDDRGKDKSRLKLVDEAFKELMMEVCK-KIALSATDLKIQSTA-EGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTG 158 (317)
T ss_dssp ESSSCEEEEEECCSTHHHHHHHHHHHH-HHHTCBCCCEEEECS-SEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEE
T ss_pred ECCCCcEEEEEEEEEecCccccccCCc-eecccCCCeEEEeec-cccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEe
Confidence 998887665555555443322211111 234567777777766 34 789999999999998866554433
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEee---------------cCC--------CCCeeeeecc
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGN---------------LNR--------LPPSYTLVFS 213 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~---------------~~~--------~~p~~~~~~~ 213 (243)
.......|.|.++..+|+|.|+|.|.|..|....++.+.+... ... .|....+..+
T Consensus 159 -~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 237 (317)
T 2y25_A 159 -VTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEG 237 (317)
T ss_dssp -ECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETT
T ss_pred -ccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcC
Confidence 2333567999999999999999999999998887777764310 001 1223556677
Q ss_pred ceeeeccCcccc--cccceEEeCCee
Q psy11132 214 QASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 214 ~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
+.+.+.|...+. +.+.|+++|..+
T Consensus 238 ~~~~l~C~~~g~p~p~i~W~~~g~~~ 263 (317)
T 2y25_A 238 KALNLTCNVWGDPPPEVSWLKNEKAL 263 (317)
T ss_dssp SBBCEEEEEECSSCCEEEEEESSSEE
T ss_pred CEEEEEEEEecCCCCEEEEEECCEeC
Confidence 888889977654 489999998765
No 18
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=7e-29 Score=192.44 Aligned_cols=230 Identities=22% Similarity=0.256 Sum_probs=171.0
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+.|.+..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+........... .....|.|.+++.+|+|.
T Consensus 114 ~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~ 191 (403)
T 3laf_A 114 AKVMVAGPLRFLSQTESITAFMGDTVLLKCEVI-GDPMPTIHWQKNQQDLNPIPGDSRVVV-LPSGALQISRLQPGDSGV 191 (403)
T ss_dssp EEEEECCCCEECSCCCCEEEETTSCEEECCCEE-CSSCCEEEEEESSSBCCCCTTCCSEEE-CTTSCEEECSCCGGGCEE
T ss_pred EEEEecCCCccccCCCcEEEEcCCeEEEEEEEc-ccCCCeEEEEECCEeccccCCceEEEE-cCCceEEEcccccccCEE
Confidence 456777888888888888899999999999985 778889999999988743221111111 124679999999999999
Q ss_pred EEEEEEeCCCc-ceeEEEEEEEcCCCcccc-----ccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeE
Q psy11132 82 YSCTVRNMVAE-DTQVQRLIVNVPPKIESF-----AFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 82 Y~C~~~~~~~~-~~~~~~l~v~~~p~~~~~-----~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~ 155 (243)
|+|.+.+..+. ....+.+.|...|..... ......+.+|+.+.|.|.+ .+.|.+.+.|++++..+........
T Consensus 192 Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~ 270 (403)
T 3laf_A 192 YRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV-SGYPPPSFTWLRGEEVIQLRSKKYS 270 (403)
T ss_dssp EEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEECCCSSSSEE
T ss_pred EEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEc-CCCCCCeEEEEECCeeccCCCceEE
Confidence 99999998765 445677888776654211 1122345689999999999 5888899999999998875443222
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec--CCCCCeeeeeccceeeeccCccccc--ccceE
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL--NRLPPSYTLVFSQASYMSTSYYSFE--QDSWM 231 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~ 231 (243)
.. ..+.|.|.++..+|+|.|+|.|.|..|.....+.+.|...+ ...|....+..+..+.+.|...+.+ .+.|+
T Consensus 271 ~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~ 347 (403)
T 3laf_A 271 LL---GGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWM 347 (403)
T ss_dssp EE---TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEE
T ss_pred EC---CccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEE
Confidence 21 13579999999999999999999999988888888887322 1123334455677888999876554 89999
Q ss_pred EeCCee
Q psy11132 232 IDNENY 237 (243)
Q Consensus 232 ~~~~~~ 237 (243)
++|..+
T Consensus 348 ~~g~~~ 353 (403)
T 3laf_A 348 KNGDVV 353 (403)
T ss_dssp ETTEEC
T ss_pred ECCEEC
Confidence 998754
No 19
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.96 E-value=1.9e-28 Score=171.04 Aligned_cols=185 Identities=21% Similarity=0.359 Sum_probs=140.4
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE-CCeeec-CCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLK-DGRYLD-NSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~-~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
|+.+...+....+.+|+.+.|.|.+.+..+.+.+.|++ ++..+. ...++...........|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 55666677788899999999999996333477999999 888776 3445555444344688999999999999999999
Q ss_pred EeCC-CcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 87 RNMV-AEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 87 ~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
.+.. +..+..+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .+.|.+.+.|++++..+............ ...|
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~L 157 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTP-QEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLS--NNYL 157 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSS-EECCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGGCCTTEEECT--TSCE
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCc-EeecCCCeEEEEEEE-CCCCCCEEEEEECCEEeeccCCceEEEec--CCeE
Confidence 9987 45667788888877766544333 567899999999999 58999999999999988643221111111 2469
Q ss_pred EEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
.|.++..+|+|.|+|.|.|..+.......+.|
T Consensus 158 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 99999999999999999999876655555544
No 20
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=171.98 Aligned_cols=176 Identities=21% Similarity=0.269 Sum_probs=138.5
Q ss_pred cccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEEEE
Q psy11132 21 LNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQRLI 100 (243)
Q Consensus 21 ~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 100 (243)
..+++.+.|.|.+.+..|.+.+.|++++..+....++...... ....|.|.+++.+|+|.|+|.+.+..+.....+.|.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTG-EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEET-TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeC-CEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 3467888899988644567899999999999877776554433 246799999999999999999999877766666655
Q ss_pred EEc--------------------CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 101 VNV--------------------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 101 v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
+.. .|.+.........+..|+.+.|.|.+ .|.|.+.+.|++++..+.............
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~ 171 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALAQTDHCNLKFEAG 171 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEETT
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEE-cCCCCceEEEEECCeECccCCCEEEEEcCC
Confidence 432 22222222222456789999999999 599999999999999998777666655545
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
....|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 172 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 172 RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 56789999999999999999999999999888888887
No 21
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.96 E-value=2.6e-29 Score=175.57 Aligned_cols=183 Identities=26% Similarity=0.405 Sum_probs=145.3
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC-CCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN-SAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
+..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++... .....|.|.+++.+|+|.|+|
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C 79 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVE-SYPQPEISWTRNKILIKLFDTRYSIR---ENGQLLTILSVEDSDDGIYCC 79 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEE-EESCCEEEEEETTEECCTTCTTEEEE---GGGTEEEESSCCGGGCEEEEE
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCC-CCCCCeEEEEECCEEccccCccEEEc---CCccEEEEcCCCcccCeEEEE
Confidence 44678888877788899999999999995 677779999999988865 3333322 124579999999999999999
Q ss_pred EEEeCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecccee
Q psy11132 85 TVRNMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSS 163 (243)
Q Consensus 85 ~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 163 (243)
.+.+..+. ....+.|.|..+|.+...+. ...+..|+.+.|.|.+ .+.|.+.+.|++++..+.......... .+
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~----~~ 153 (192)
T 2iep_A 80 TANNGVGGAVESCGALQVKMKPKITRPPI-NVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSALRENSRIAVLE----SG 153 (192)
T ss_dssp EEECSSSCCEEEEEEEEEEEEEEEEECCC-CEEEETTSCEEECCEE-EEESCCEEEEEETTEECCCCSSEEECT----TS
T ss_pred EEEcCCCceeEeEEEEEEEeCCccccCCc-ceEEeCCCcEEEEEEE-eccCCceEEEEeCCEEccCCCcEEEec----CC
Confidence 99998776 45667788877776554332 2456789999999999 588999999999999887665443321 34
Q ss_pred EEEEeecCCCCCeeEEEEEEccCcce-eeeEEEEEE
Q psy11132 164 LLSINSVSAAHSGEYTCVASNTAAQA-RYSSKLQVK 198 (243)
Q Consensus 164 ~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~~~l~v~ 198 (243)
.|.|.++..+|+|.|+|.|.|..|.. ...+.|.|.
T Consensus 154 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 154 SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 69999999999999999999999987 456888888
No 22
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.96 E-value=9.7e-28 Score=185.22 Aligned_cols=221 Identities=19% Similarity=0.263 Sum_probs=161.5
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--CeeecC-----CCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLDN-----SAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+|.+.. +.+..+.+|+.+.|.|.+. +.|.+.+.|+++ +..+.. ..++.+... .....|.|.+++.+|+|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~-g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~ 77 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAE-GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ-HGSSSLHIKDVKLSDSGR 77 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEE-CSSCCEEEEEETTTTEEECC--CCSSSSEEEEEC-SSEEEEEEESCCGGGCEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEee-cccCCeEEEEeCCCCceeccCcCCCCCeEEEecc-CCcceEEEcccChhhCEE
Confidence 456665 4456788899999999995 888889999999 887764 344443322 235789999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC-eeEEeecc
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP-VNVSDLDS 160 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~ 160 (243)
|+|.+.|..|..+..+.|.|..+|.+.... ....+..|+.+.|.|.+ .|.|.+.+.|++++..+..... ........
T Consensus 78 Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~-~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~ 155 (389)
T 2jll_A 78 YDCEAASRIGGHQKSMYLDIEYAPKFISNQ-TIYYSWEGNPINISCDV-KSNPPASIHWRRDKLVLPAKNTTNLKTYSTG 155 (389)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEEEECCSC-CEEEECTTCCEEEEECE-EEESCCEEEEEETTEESSCTTCTTEEEEECS
T ss_pred EEEEEEeCCCCcceEEEEEEEeCCEEecCc-ceEEeccCCEEEEEEEE-EecCCCeEEEEECCccCCcccCceEEEeccC
Confidence 999999999988888999999887765422 21245789999999999 5889999999999999876542 12222233
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCC-eeee--eccceeeeccCcc----ccc----ccc
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPP-SYTL--VFSQASYMSTSYY----SFE----QDS 229 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p-~~~~--~~~~~~~~~~~~~----~~~----~~~ 229 (243)
....|.|.++..+|+|.|+|.|.|..|.....+.+.+...+ .+| .+.. .....+.+.|..- ..+ .+.
T Consensus 156 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P--~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~ 233 (389)
T 2jll_A 156 RKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVP--SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVD 233 (389)
T ss_dssp SCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCC--CCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEE
T ss_pred CEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCC--CCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEE
Confidence 45789999999999999999999999998877777765332 344 2222 2234555555421 111 567
Q ss_pred eEEeCCe
Q psy11132 230 WMIDNEN 236 (243)
Q Consensus 230 W~~~~~~ 236 (243)
|.+++..
T Consensus 234 ~~~~~~~ 240 (389)
T 2jll_A 234 VKEVASE 240 (389)
T ss_dssp EEETTCS
T ss_pred EEECCCc
Confidence 7776653
No 23
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=9e-28 Score=179.56 Aligned_cols=191 Identities=19% Similarity=0.239 Sum_probs=151.5
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC-CceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS-AALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+... .++...........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVT-GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEE-CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEe-CCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 478888888889999999999999995 7788899999999988653 34444333333468999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccc----cCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccce
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFA----FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 162 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~----~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 162 (243)
.|..+..+..+.|.|..+|.+.... .....+..|+.+.|.|.+ .|.|.+.+.|++++..+.......... ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~-~~~~ 159 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNNGHYQVIV-TRSF 159 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEE-EEESCCEEEEEESSSBCCSSSSCEEEE-CSSE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEE-CCCCCCEEEEEECCEECCCCCcEEEEE-cCCc
Confidence 9998887888888887665543211 122345679999999999 588999999999998887655444332 2235
Q ss_pred eEEEEee-cCCCCCeeEEEEEEccCcceeeeEEEEEEeec
Q psy11132 163 SLLSINS-VSAAHSGEYTCVASNTAAQARYSSKLQVKGNL 201 (243)
Q Consensus 163 ~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~ 201 (243)
..|.|.+ +..+|.|.|+|.|.|..|....++.+.|.+.+
T Consensus 160 ~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P 199 (305)
T 2nzi_A 160 TSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP 199 (305)
T ss_dssp EEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred eEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC
Confidence 6789998 99999999999999999999888888887543
No 24
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.96 E-value=5.7e-28 Score=168.73 Aligned_cols=183 Identities=23% Similarity=0.395 Sum_probs=142.8
Q ss_pred CCCccCCCC--CcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNP--ERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
||.+..... ...+.+|+.+.|.|.+. +.|.+.+.|++++..+....+..+. .....|.|.+++.+|+|.|+|.+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~ 77 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRAS-GSPEPAISWFRNGKLIEENEKYILK---GSNTELTVRNIINSDGGPYVCRA 77 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEE-CSSCCEEEEEETTEECCCSSSEEEE---TTTTEEEECSCCGGGCEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeec-cCCCCeEEEEECCeEcCCCccEEEe---CCeeEEEEecCChhcCcEEEEEE
Confidence 677766543 56789999999999995 7788899999999998876655432 22568999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeC--CEecCCCC----CeeEEeecc
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKD--GKPLSPRF----PVNVSDLDS 160 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--~~~~~~~~----~~~~~~~~~ 160 (243)
.+..+.....+.|.|..+|.+.... ...+..|+.+.|.|.+ .+.|.+.+.|+++ +..+.... .........
T Consensus 78 ~~~~~~~~~~~~l~V~~~p~~~~~~--~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (192)
T 2va4_A 78 TNKAGEDEKQAFLQVFVQPHIIQLK--NETTYENGQVTLVCDA-EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH 154 (192)
T ss_dssp EETTEEEEEEEEEEEEEEEEEEEEC--CEEECTTSEEEEEEEE-EEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET
T ss_pred EccccccceEEEEEEEccCcccccC--cceEEeCCeEEEEEEe-cCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc
Confidence 9988877778888888777654432 2345679999999999 5889999999998 55554321 111222223
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 155 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 155 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 35789999999999999999999999998888888763
No 25
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=3.5e-30 Score=195.04 Aligned_cols=210 Identities=24% Similarity=0.344 Sum_probs=90.0
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCccee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQ 95 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 95 (243)
+....+.+|+.+.|.|.+.+..|.+.+.|++++..+....++... ...|.|.+++.+|+|.|+|.+.+. +....
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~ 88 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG-----PQRLQVLNASHEDSGAYSCRQRLT-QRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec-----cceEEEeecccccCEEEEEEEEeC-CeEEE
Confidence 667889999999999999644466799999999888765554332 568999999999999999999988 66666
Q ss_pred EEEEEEEcCCC----------------------ccccc---cCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC
Q psy11132 96 VQRLIVNVPPK----------------------IESFA---FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 150 (243)
Q Consensus 96 ~~~l~v~~~p~----------------------~~~~~---~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~ 150 (243)
.+.|.|...+. +.... .....+..|+.+.|.|.+ .|.|.+.+.|++++..+...
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~ 167 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRGE 167 (334)
T ss_dssp ------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCC-CCSSCCEEECCBTTBCCCTT
T ss_pred EEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEc-cCCCCCeEEEEECCEECccc
Confidence 77777765432 11100 001235579999999999 58899999999999887755
Q ss_pred CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCC-------CCCeeeeeccceeeeccCcc
Q psy11132 151 FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNR-------LPPSYTLVFSQASYMSTSYY 223 (243)
Q Consensus 151 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~-------~~p~~~~~~~~~~~~~~~~~ 223 (243)
..............|.|.++..+|+|.|+|.|.|..|.....+.|.|...... .|....+..++.+.+.|...
T Consensus 168 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~ 247 (334)
T 1ry7_B 168 HRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY 247 (334)
T ss_dssp SSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCB
T ss_pred ccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEe
Confidence 43322222233568999999999999999999999998888888888753221 12334566788889999876
Q ss_pred ccc--ccceEE
Q psy11132 224 SFE--QDSWMI 232 (243)
Q Consensus 224 ~~~--~~~W~~ 232 (243)
..+ .+.|++
T Consensus 248 g~p~p~v~W~~ 258 (334)
T 1ry7_B 248 SDAQPHIQWLK 258 (334)
T ss_dssp CSSCEEEEEEE
T ss_pred cCCCCeEEEEE
Confidence 554 899999
No 26
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=172.89 Aligned_cols=180 Identities=11% Similarity=0.142 Sum_probs=132.8
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee-eeceEEEEeecCCCCCeeEEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD-QYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
+|.+... ....+.+|+.+.|.|.+..+.|.+.++|+++|..+....++.+.... .+...|.|.+++.+|+|.|+|.+.
T Consensus 3 ~p~~~~~-~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEE-EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecC-CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 3444443 35678999999999998656788999999999999877766554422 234579999999999999999999
Q ss_pred eCCCcceeEEEEEEE---------------------cCCCccccccCCCCCCCCCcEEEEEEeecCC-CCCEEEEEeCCE
Q psy11132 88 NMVAEDTQVQRLIVN---------------------VPPKIESFAFPFDGLPEGARTRVICGVTHGD-PPLTIRWLKDGK 145 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~~~ 145 (243)
| +.......+.+. .+|.+.... . ..+.+|+.+.|.|.+ .|. |.+.+.|++++.
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~-~~v~~g~~v~l~C~v-~g~~P~p~i~W~k~g~ 156 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-S-WEVTGECNVLLKCKV-ANIKKETHIVWYKDER 156 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-E-EEEETTTEEEEEEEE-ESCCTTCEEEEEETTE
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-C-cEEcCCCcEEEEEEE-eCCCCCCEEEEEECCE
Confidence 8 443333333221 123222211 1 456789999999999 577 899999999999
Q ss_pred ecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 146 PLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
.+.....+. .......|.|.++..+|+|.|+|.|.|..|....++.|..
T Consensus 157 ~l~~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 157 EISVDEKHD---FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EECCCCCCC---CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ECCCCCceE---cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 987654321 1222457999999999999999999999999988887764
No 27
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.96 E-value=1e-27 Score=166.14 Aligned_cols=176 Identities=25% Similarity=0.372 Sum_probs=136.9
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee-eeceEEEEeecCCCCCeeEEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD-QYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
+|.+...+....+.+|+++.|.|.+. +.|.+.+.|++++..+....+....... .....|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~-~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVE-GMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEE-SCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEe-CCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 56777777888899999999999996 6788899999999988776544333221 224789999999999999999999
Q ss_pred eCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 88 NMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 88 ~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
+..+. .+..+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .+.|.+ .+.|++++..+..... ....|
T Consensus 81 ~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~--------~~~~L 150 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVPFFTVEPKD-LAVPPNAPFQLSCEA-VGPPEPVTIVWWRGTTKIGGPAP--------SPSVL 150 (182)
T ss_dssp SCTTCEECCCEEEEEECSCEEEECCCC-EEECTTCCEEEEEEE-ECSSSCCEEEEEETTEECSCSEE--------SSEEE
T ss_pred cCCCcEEEEEEEEEEecCCeEEecCcc-eEecCCCEEEEEeEe-cCCCCCCEEEEEcCCeECCCCCC--------CceEE
Confidence 87664 556788999888876554333 567889999999999 588888 9999999998865421 35778
Q ss_pred EEeecCCCCCeeEEEEEEccCccee-eeEEEEE
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQAR-YSSKLQV 197 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v 197 (243)
.|.++ +|+|.|+|.|.|..|... ..+.|.|
T Consensus 151 ~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 151 NVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 89887 589999999999999875 4777766
No 28
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=6.4e-28 Score=202.41 Aligned_cols=228 Identities=24% Similarity=0.380 Sum_probs=174.0
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecC-CCCCe
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVS-ARHSG 80 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~G 80 (243)
..|.|..+|.+... ....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+.... .+..|.|.++. ..|+|
T Consensus 520 ~~l~V~~~p~~~~~-~~~~v~~G~~v~l~C~~~-g~p~~~i~W~k~~~~l~~~~~~~~~----~~~~l~i~~v~~~~d~G 593 (816)
T 3dmk_A 520 AKLNVYGLPYIRQM-EKKAIVAGETLIVTCPVA-GYPIDSIVWERDNRALPINRKQKVF----PNGTLIIENVERNSDQA 593 (816)
T ss_dssp EEEEECSSCEECCC-CCEEEETTCCEEEECCEE-CSSEEEEEEEETTEESCCSTTEEEC----TTSEEEESSCCHHHHCE
T ss_pred EEEEEecCCeeEcc-CCeEEecCCeEEEEEEec-CCCCCEEEEEECCeEcccCCceEEe----cCCeEEEEecCccccCE
Confidence 35677778866543 456688999999999995 7788899999999988766554332 25679999998 58999
Q ss_pred eEEEEEEeCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeec
Q psy11132 81 NYSCTVRNMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD 159 (243)
Q Consensus 81 ~Y~C~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~ 159 (243)
.|+|.+.|..+. ....+.+.+..+|.+.........+..|+.+.|.|.+..+.+++.+.|+++|..+............
T Consensus 594 ~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~ 673 (816)
T 3dmk_A 594 TYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVG 673 (816)
T ss_dssp EEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEET
T ss_pred EEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcC
Confidence 999999999885 4556778888877765544344567789999999999545556699999999988765555544444
Q ss_pred cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec--CCCCCeeeeeccceeeeccCccccc--ccceEEeCC
Q psy11132 160 SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL--NRLPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNE 235 (243)
Q Consensus 160 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~ 235 (243)
...+.|.|.++..+|+|.|+|.|.|..|....++.|.|...+ ...|....+..+..+.+.|...+.| .++|++++.
T Consensus 674 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~ 753 (816)
T 3dmk_A 674 RRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVG 753 (816)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECS
T ss_pred CCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCC
Confidence 556889999999999999999999999999888888887321 1122233445577788888876654 899999864
No 29
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=9.3e-28 Score=179.97 Aligned_cols=219 Identities=12% Similarity=0.085 Sum_probs=159.7
Q ss_pred CcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEE
Q psy11132 18 ERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQ 97 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 97 (243)
...+.+|+.+.|.|....+.|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+.+..+... .+
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~ 87 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKG-NKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SY 87 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEET-TEEEEEESSCCGGGCEEEEEEESSSCCCCE-EE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeC-CEEEEEECcCCccCCEEEEEEEEeCCCcEE-EE
Confidence 4668899999999988666788899999999999877776655422 247899999999999999999998877543 45
Q ss_pred EEEEEc------------CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee-ccceeE
Q psy11132 98 RLIVNV------------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL-DSFSSL 164 (243)
Q Consensus 98 ~l~v~~------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~ 164 (243)
.+.|.. +|.+.........+.+|+.+.|.|.+..+.|.+.+.|++++..+.....+..... ......
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~ 167 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 167 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEE
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEE
Confidence 555543 5554443322356789999999999944889999999999999887665544432 234567
Q ss_pred EEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEe--------------ecCCCCCe------eeeeccceeeeccCccc
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKG--------------NLNRLPPS------YTLVFSQASYMSTSYYS 224 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~--------------~~~~~~p~------~~~~~~~~~~~~~~~~~ 224 (243)
|.|.++..+|+|.|+|.|.+..+.......+.... .....+|. ..+..+..+.+.|....
T Consensus 168 L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~ 247 (312)
T 2y23_A 168 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVAN 247 (312)
T ss_dssp EEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEES
T ss_pred EEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcC
Confidence 99999999999999999987544433333321000 00012232 45667888899998766
Q ss_pred c--c-ccceEEeCCeeE
Q psy11132 225 F--E-QDSWMIDNENYV 238 (243)
Q Consensus 225 ~--~-~~~W~~~~~~~~ 238 (243)
. + .+.|+++|..+.
T Consensus 248 ~p~~~~v~W~~~g~~~~ 264 (312)
T 2y23_A 248 IKKETHIVWYKDEREIS 264 (312)
T ss_dssp CCSSCEEEEEETTEEEE
T ss_pred CCCCCEEEEeeCCEECC
Confidence 4 4 899999998765
No 30
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.96 E-value=8.5e-28 Score=173.82 Aligned_cols=183 Identities=25% Similarity=0.329 Sum_probs=138.3
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCccee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQ 95 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 95 (243)
+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.................|.|.+++.+|+|.|+|.+.+..+....
T Consensus 22 ~~~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 100 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAA-GNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQ 100 (241)
T ss_dssp CCEEEEETTSEEEEECCEE-CSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CcceEEcCCCeEEEEEEec-CCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEE
Confidence 3457789999999999996 778889999999998876443322222333678999999999999999999998888777
Q ss_pred EEEEEEEcCCCc----cccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEe----CCEecCCCCCeeEEe-------ecc
Q psy11132 96 VQRLIVNVPPKI----ESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK----DGKPLSPRFPVNVSD-------LDS 160 (243)
Q Consensus 96 ~~~l~v~~~p~~----~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~----~~~~~~~~~~~~~~~-------~~~ 160 (243)
.+.|.|...+.. .........+..|+.+.|.|.+ .+.|.+.+.|++ ++..+.......... ...
T Consensus 101 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~-~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (241)
T 3grw_A 101 TYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV-YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVE 179 (241)
T ss_dssp EEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEE-ECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSE
T ss_pred EEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEE-ecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecC
Confidence 888888763321 1111222457789999999999 688999999999 777776543322111 112
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEee
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGN 200 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~ 200 (243)
..+.|.|.++..+|+|.|+|.|.|..|....++.|.|.+.
T Consensus 180 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 180 ADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---
T ss_pred CceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCC
Confidence 3567999999999999999999999999999999998843
No 31
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.96 E-value=1.8e-28 Score=172.28 Aligned_cols=171 Identities=21% Similarity=0.249 Sum_probs=122.8
Q ss_pred CcccccCCeEEEEEEee--CCCCCceeEEEECCeeecC-----------------CCceEEEEeeeeceEEEEeecCCCC
Q psy11132 18 ERTLNVGERASLICSIT--KGDIPLTIKWLKDGRYLDN-----------------SAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~--~~~~~~~v~W~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
.+++..|+.++|.|.+. .+.|.+.++|+|+|..... ..++... .......|.|.+++.+|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIH-RSANTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEE-EETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEE-EcCCEEEEEEccCCHHH
Confidence 46788999999999642 3668889999997643211 1111111 22235789999999999
Q ss_pred CeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC---CeeE
Q psy11132 79 SGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF---PVNV 155 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~---~~~~ 155 (243)
+|.|+|.+.|..+.....+.|.|..||.+...+.. ..+.+|+.+.|.|.+ .|.|.|.++|++++..+.... ....
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~-~~v~~g~~~~l~C~~-~G~P~P~v~W~~~~~~~~~~~~~~~r~~ 158 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSER-SQFPDFSVLTVTCTV-NAFPHPHVQWLMPEGVEPAPTAANGGVM 158 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEE-CCSSCSCCEEEEEEE-EEESCCEEEECCC------------CCE
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCceeeeccee-EEEcCCCEEEEEEEc-CCCCCCEEEEEECCeeecCcccccceEE
Confidence 99999999999998888899999877765544333 677899999999999 589999999998765443211 1111
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcceee
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY 191 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 191 (243)
...++.-..+.+.++..+|+|.|+|.|.|..|....
T Consensus 159 ~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 159 KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 222333355677899999999999999999998764
No 32
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.96 E-value=7e-28 Score=170.83 Aligned_cols=182 Identities=23% Similarity=0.384 Sum_probs=137.7
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec------------CCCceEEEEeeeeceEEEEeecCCC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD------------NSAALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+. ...+.... ...|.|.+++.+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~L~i~~v~~~ 75 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYS-GFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-----SSGITFSSVTRK 75 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEE-SCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-----TTEEEESCCCGG
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeC-CCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-----ceeEEEcccCcc
Confidence 4555666778899999999999996 66888999999876531 12233222 378999999999
Q ss_pred CCeeEEEEEEeCCC--cceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCE-ecCCCCCe-
Q psy11132 78 HSGNYSCTVRNMVA--EDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK-PLSPRFPV- 153 (243)
Q Consensus 78 d~G~Y~C~~~~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~-~~~~~~~~- 153 (243)
|+|.|+|.+.+..+ ..+..+.|.|..+|.+...... ..+..|+.+.|.|.+..+.|.+.+.|++++. .+......
T Consensus 76 D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~ 154 (212)
T 1f97_A 76 DNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVP-SSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKT 154 (212)
T ss_dssp GCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECC-SEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----C
T ss_pred cCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCc-cccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccc
Confidence 99999999999866 4567788889888877655443 5577899999999943789999999999999 77654321
Q ss_pred -----eEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce--eeeEEEEEE
Q psy11132 154 -----NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSSKLQVK 198 (243)
Q Consensus 154 -----~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~~l~v~ 198 (243)
.........+.|.|.++..+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 155 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 155 RAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp BSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred ccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 111122335679999999999999999999999988 455666666
No 33
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=9.3e-28 Score=181.42 Aligned_cols=209 Identities=18% Similarity=0.174 Sum_probs=150.3
Q ss_pred CCcccccCCeEEEEEEeeCC--------CCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCe-eEEEEEE
Q psy11132 17 PERTLNVGERASLICSITKG--------DIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG-NYSCTVR 87 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~--------~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~ 87 (243)
....+.+|+++.|.|.+.+. .|.+.+.|++++..+....+. .....|.|.+++.+|+| .|+|.+.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~------~~~~~L~i~~v~~~D~Gs~Y~C~a~ 110 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR------VKNGDLWIANYTSNDSHRRYLCTVT 110 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT------EETTEEEESSCCGGGGGCCEEEEEE
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce------eecceEEEcCCChHhCCCcEEEEEE
Confidence 34568999999999998642 255799999999876543332 12678999999999999 9999999
Q ss_pred eCCCcceeEEEEEEE-cCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 88 NMVAEDTQVQRLIVN-VPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~-~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
+..|.......+.+. .+|.+.... ....+.+|+.+.|.|.+ .|.| .+.+.|++++..+.......... ...|
T Consensus 111 n~~g~~~~~~~~~v~~~~p~~~~~~-~~~~~~~G~~v~L~C~~-~g~p~~~~i~W~k~~~~l~~~~~~~~~~----~~~L 184 (329)
T 3oq3_B 111 TKNGDCVQGIVRSHIRKPPSCIPET-YELGTHDKYGIDLYCGI-LYAKHYNNITWYKNNQELIIDGTKYSQS----GQNL 184 (329)
T ss_dssp CTTSCEEEEEEEEEECCCCSCEEEE-EETTSSTTTCEEEECCC-CSCCCCCEEEEEETTEECCCSSSSEEEE----TTEE
T ss_pred eCCCceeeEEEEEEEcCCCcEeccc-cceEEeCCCcEEEEecc-CCCCCCceEEEEECCccCCCCCceEecC----CCEE
Confidence 988764433332333 344432222 22456789999999998 6888 89999999999886332222111 3679
Q ss_pred EEeecCCCCCeeEEEEEEcc--Ccceeee----EEEEEEeecC-----CCCCeeeeeccceeeeccCccccc------cc
Q psy11132 166 SINSVSAAHSGEYTCVASNT--AAQARYS----SKLQVKGNLN-----RLPPSYTLVFSQASYMSTSYYSFE------QD 228 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~--~g~~~~~----~~l~v~~~~~-----~~~p~~~~~~~~~~~~~~~~~~~~------~~ 228 (243)
.|.++..+|+|.|+|.|.|. .|..... +.|.|...+. ..|+...+..++.+.+.|.....+ .+
T Consensus 185 ~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v 264 (329)
T 3oq3_B 185 IIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLI 264 (329)
T ss_dssp EECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEE
T ss_pred EEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEE
Confidence 99999999999999999997 6544333 6666663221 134455667788899999887764 67
Q ss_pred ceEEeCCee
Q psy11132 229 SWMIDNENY 237 (243)
Q Consensus 229 ~W~~~~~~~ 237 (243)
.|+++|..+
T Consensus 265 ~W~~~g~~i 273 (329)
T 3oq3_B 265 DWENPSGWI 273 (329)
T ss_dssp EEECTTSCB
T ss_pred EEEECCeee
Confidence 999998764
No 34
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.96 E-value=6.7e-28 Score=167.96 Aligned_cols=181 Identities=21% Similarity=0.362 Sum_probs=137.0
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC--CceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS--AALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+... .++... ....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~ 76 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVS-SSPAPAVSWLYHNEEVTTISDNRFAML----ANNNLQILNINKSDEGIYRCEG 76 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEE-CSSCCEEEEEC-----CBCCCTTEEEC----TTSCEEETTCCGGGCEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEc-CCCCCEEEEEECCccceeccCCeEEEe----cCCCEEEeeCCHhHCcEEEEEE
Confidence 56777777788899999999999995 6778899999999877542 232221 1457999999999999999999
Q ss_pred EeCCCcc--eeEEEEEEEcCCCccccccC-CCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecccee
Q psy11132 87 RNMVAED--TQVQRLIVNVPPKIESFAFP-FDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSS 163 (243)
Q Consensus 87 ~~~~~~~--~~~~~l~v~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 163 (243)
.+..+.. ...+.+.+..+|.+...... ...+..|+.+.|.|.+ .+.|.+.+.|++++..+......... ....
T Consensus 77 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~---~~~~ 152 (189)
T 2v5t_A 77 RVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEENEKYILK---GSNT 152 (189)
T ss_dssp EETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEE-EEESCCEEEEEETTEECCCSSSEEEE---TTTT
T ss_pred EEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEE-ccCCCCeEEEEECCEECcCCCcEEEe---cCCC
Confidence 9876543 34566677666655433221 2356789999999999 57899999999999998866544332 2246
Q ss_pred EEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 164 LLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 164 ~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 153 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 153 ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 79999999999999999999999999888888876
No 35
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=8.6e-28 Score=181.47 Aligned_cols=225 Identities=17% Similarity=0.251 Sum_probs=151.8
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec---------CCCceEEEEee----eeceEEEEeecCC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD---------NSAALSITHVD----QYNSMLVIDSVSA 76 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~---------~~~~~~~~~~~----~~~~~l~i~~~~~ 76 (243)
..+...+....+.+|+++.|.|.+.+..|.+.+.|++++.... ...++...... .....|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 3455556678899999999999996333778999999875421 01122211110 2356799999999
Q ss_pred CCCeeEEEEEEeCCCcc-----eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC--EEEEEeCCEecCC
Q psy11132 77 RHSGNYSCTVRNMVAED-----TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL--TIRWLKDGKPLSP 149 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~~~W~~~~~~~~~ 149 (243)
+|+|.|+|.+.+..+.. .....|.|..+|..+....+...+..|+.+.|.|.+. +.|++ .+.|+++|..+..
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~-g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESH-GFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEE-EEBSSCCEEEEEETTEECCC
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEe-CccCCCcEEEEEECCEEccc
Confidence 99999999999876531 2346788887766544433336678999999999995 55544 9999999998875
Q ss_pred CCCeeEEeec----cceeEEEEeecCCCCCeeEEEEEEccCcce---eeeEEEEEEeecCCCCCeeeee-----ccceee
Q psy11132 150 RFPVNVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQA---RYSSKLQVKGNLNRLPPSYTLV-----FSQASY 217 (243)
Q Consensus 150 ~~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~---~~~~~l~v~~~~~~~~p~~~~~-----~~~~~~ 217 (243)
.......... ...+.|.|.....+|.|.|+|.|.|..+.. ..+..+.+. ...||.+.+. .++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~---v~~~P~i~~~~~~~~~G~~v~ 239 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET---IRVPPTLEVTQQPVRAENQVN 239 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT---BCBCCEEEEEEECCSSTTCCE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc---cCCCCEEEEecCCcCCCCcEE
Confidence 4321111111 113457787766677899999999987753 222322211 1256665543 567788
Q ss_pred eccCcccc-c---ccceEEeCCeeE
Q psy11132 218 MSTSYYSF-E---QDSWMIDNENYV 238 (243)
Q Consensus 218 ~~~~~~~~-~---~~~W~~~~~~~~ 238 (243)
+.|..... + .+.|++||+.+.
T Consensus 240 l~C~~~g~~p~~~~v~W~k~g~~l~ 264 (327)
T 2wng_A 240 VTCQVRKFYPQRLQLTWLENGNVSR 264 (327)
T ss_dssp EEEEEEEEBSSCEEEEEEETTEEEE
T ss_pred EEEEEccccCCCcEEEEEECCeEcc
Confidence 99988764 2 699999998764
No 36
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=186.74 Aligned_cols=224 Identities=16% Similarity=0.146 Sum_probs=164.7
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeC------CCCCceeEEEECCeee--cCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITK------GDIPLTIKWLKDGRYL--DNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~------~~~~~~v~W~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
..|.+...+....+.+|+.+.|.|.+.. +.|.+.+.|++++..+ .......+.. .+..|.|.+++.+|+
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~D~ 93 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA---QDGALWLLPALQEDS 93 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE---ETTEEEESSBCTTCC
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe---eCCeEEECCCCcccC
Confidence 4567777788889999999999999842 6777899999999873 3321222221 256899999999999
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEcCCCccccc-cCCCCCCCCCcEEEEEE-----eecCCCCCEEEEEeCCEecCCCCCe
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNVPPKIESFA-FPFDGLPEGARTRVICG-----VTHGDPPLTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~-----~~~~~p~~~~~W~~~~~~~~~~~~~ 153 (243)
|.|+|.+.+..+.....+.|.|..++...... .....+..|+.+.|.|. + .+.|.+.+.|++++..+......
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~-~g~p~~~v~W~k~g~~~~~~~~~ 172 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFT-RDKTDVKIQWYKDSLLLDKDNEK 172 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTC-CSSSCCCBCCEESSCBCCTTCSS
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccc-cCCCCceEEEecCCeeCCCCCce
Confidence 99999999988888888889988776543111 11134678999999999 5 68899999999999988755322
Q ss_pred eEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc----eeeeEEEEEEeecCCCCCee-------eeeccceeeeccCc
Q psy11132 154 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ----ARYSSKLQVKGNLNRLPPSY-------TLVFSQASYMSTSY 222 (243)
Q Consensus 154 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~----~~~~~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~ 222 (243)
.... .....|.|.++..+|+|.|+|.|.|..|. ....+.|.|.......+|.+ .+..+..+.+.|..
T Consensus 173 ~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~ 250 (339)
T 3o4o_C 173 FLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKV 250 (339)
T ss_dssp EEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCE
T ss_pred eEEc--CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEE
Confidence 2211 12358999999999999999999998873 45567777764433234443 34457778899987
Q ss_pred ---ccc---cccceEEeCCee
Q psy11132 223 ---YSF---EQDSWMIDNENY 237 (243)
Q Consensus 223 ---~~~---~~~~W~~~~~~~ 237 (243)
.+. +.+.|+++|..+
T Consensus 251 ~~~~g~P~~~~v~W~~~g~~~ 271 (339)
T 3o4o_C 251 FLGTGTPLTTMLWWTANDTHI 271 (339)
T ss_dssp EESSSCCSSCEEEEESSSSCS
T ss_pred ECCCCCCCCceEEEEECCeec
Confidence 544 379999988653
No 37
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.96 E-value=9.8e-28 Score=186.72 Aligned_cols=216 Identities=9% Similarity=0.079 Sum_probs=140.5
Q ss_pred CccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCC
Q psy11132 11 KLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMV 90 (243)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 90 (243)
.+...+..+.+.+|+++.|.|.+. +.|.+.+.|++++..+....... .......+|.|.+++.+|+|.|+|.|.|..
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~-g~P~p~i~W~~~~~~l~~~~~~~--~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 126 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVD-APGNISCLWVFKHSSLNCQPHFD--LQNRGVVSMVILKMTETQAGEYLLFIQSEA 126 (423)
T ss_dssp ------CEEEECSSCCEEEEEECS-CCSSCEEEEEETTEEECCCCBC-------CEEEEEESSCCSSSCSEEEEEEEC--
T ss_pred cceeccccEEEecCCcEEEEEEEE-cCCCCeEEEEECCCccCccceec--cccceEEEEEEeecCcccCEEEEEEEEcCC
Confidence 334445578899999999999995 78888999999998776533221 111223579999999999999999999998
Q ss_pred CcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeec
Q psy11132 91 AEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV 170 (243)
Q Consensus 91 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 170 (243)
+.....+.|.|..+|.+....+ ..+..|+.+.|.|.+ .|.|.|.++|++++..+................. +
T Consensus 127 g~~~~~~~l~V~~~p~~~~~~p--~~~~~~~~~~L~C~a-~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~-----l 198 (423)
T 3qs7_E 127 TNYTILFTVSIRNTLLYTLRRP--YFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKV-----L 198 (423)
T ss_dssp CEEEEEEEEEEC-----CEEEE--EEEECSSSSCEEEEE-EESSCCEEEEEEC-------------CEEECCSE-----E
T ss_pred CcEEEEEEEEEecCccccccCC--cEeccCCceEEEEEE-eeecCCeEEEEECCCCCccccccccccccccceE-----E
Confidence 8888888888876554421111 123457788899999 6999999999998875432110000000000111 1
Q ss_pred CCCCCeeEEEEEEccCcceee-eEEEEEEeecCCCCCeeeeeccceeeeccCccc-c--cccceEEeCCee
Q psy11132 171 SAAHSGEYTCVASNTAAQARY-SSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYS-F--EQDSWMIDNENY 237 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g~~~~-~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~-~--~~~~W~~~~~~~ 237 (243)
...|+|.|+|.|.|..|.... .+.|.|...+...++...+..++.+.+.|.... . +.+.|+++|..+
T Consensus 199 ~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l 269 (423)
T 3qs7_E 199 HELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKAL 269 (423)
T ss_dssp CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBC
T ss_pred ecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEc
Confidence 578999999999999997644 366666544443455667788999999998876 3 489999998753
No 38
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.96 E-value=7.3e-28 Score=172.96 Aligned_cols=190 Identities=24% Similarity=0.351 Sum_probs=142.9
Q ss_pred cCCCccCCC----CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEE
Q psy11132 8 VPPKLSPTN----PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYS 83 (243)
Q Consensus 8 ~~p~~~~~~----~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 83 (243)
.+|.+...+ ....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+............|.|.+++.+|+|.|+
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAG-GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEE-EESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecc-cCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 456654443 667799999999999995 677789999999998876544322222333568999999999999999
Q ss_pred EEEEeCCCcceeEEEEEEEcCCCcc----ccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEe----CCEecCCCCCeeE
Q psy11132 84 CTVRNMVAEDTQVQRLIVNVPPKIE----SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK----DGKPLSPRFPVNV 155 (243)
Q Consensus 84 C~~~~~~~~~~~~~~l~v~~~p~~~----~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~----~~~~~~~~~~~~~ 155 (243)
|.+.+..+.....+.|.|...+... ........+..|+.+.|.|.+ .+.|.+.+.|++ ++..+........
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~g~~~~~~~~~~~ 171 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKV-YSDAQPHIQWIKHVEKNGSKYGPDGLPYL 171 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCE-ECSSCCEEEEEEECCBTTBSBCTTSCBCE
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEE-ecCCCCEEEEEECCCCCCccccCCCcceE
Confidence 9999988887788888887644321 111122446789999999999 588999999999 7776654432211
Q ss_pred E--ee----ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEe
Q psy11132 156 S--DL----DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 156 ~--~~----~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
. .. ....+.|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 172 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (231)
T 3ojm_B 172 KVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLP 221 (231)
T ss_dssp EEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEec
Confidence 1 11 11235799999999999999999999999999999999884
No 39
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=5.1e-27 Score=174.30 Aligned_cols=190 Identities=21% Similarity=0.344 Sum_probs=146.5
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+.|.+..+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+........... ....|.|.+++..|+|.
T Consensus 91 ~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~ 167 (291)
T 2wim_A 91 VVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVS-SSPAPAVSWLYHNEEVTTISDNRFAML--ANNNLQILNINKSDEGI 167 (291)
T ss_dssp EEEEEECCCBCCSCCCSEEEETTSCEEECCCCB-CSSCCEEEEECC----CBCCCSSEEEC--TTSCEEETTCCGGGCEE
T ss_pred EEEEecCCcceEeCCCChhhcCCCCEEEEEEEc-cCCCCEEEEEECCccccccCCceEEEc--cCCCEEEEecchhhCEE
Confidence 456778888888777788899999999999995 778889999999987764222111111 14579999999999999
Q ss_pred EEEEEEeCCCc--ceeEEEEEEEcCCCccccccC-CCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee
Q psy11132 82 YSCTVRNMVAE--DTQVQRLIVNVPPKIESFAFP-FDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL 158 (243)
Q Consensus 82 Y~C~~~~~~~~--~~~~~~l~v~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~ 158 (243)
|+|.+.+..+. ....+.+.+..+|.+...... ...+..|+.+.|.|.+ .|.|.+.+.|++++..+.........
T Consensus 168 Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~-- 244 (291)
T 2wim_A 168 YRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEENEKYILK-- 244 (291)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBC-CCBSCCEEEEEETTEECCCTTTEEEC--
T ss_pred EEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEe-ecCCCCeEEEEECCEECcCCccEEEc--
Confidence 99999987754 345567777777776543321 2467789999999999 68899999999999998876544332
Q ss_pred ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 159 DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 159 ~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.....|.|.++..+|+|.|+|.|.|..|....++.+.|.
T Consensus 245 -~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 283 (291)
T 2wim_A 245 -GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 283 (291)
T ss_dssp -STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-
T ss_pred -CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEE
Confidence 224679999999999999999999999999999999988
No 40
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.96 E-value=1.2e-28 Score=174.87 Aligned_cols=194 Identities=24% Similarity=0.364 Sum_probs=137.7
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCc---e-EEEEeee--eceEEEEeecCCCCCee
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAA---L-SITHVDQ--YNSMLVIDSVSARHSGN 81 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~---~-~~~~~~~--~~~~l~i~~~~~~d~G~ 81 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... . ....... ....|.|.+++..|+|.
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAE-GRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEE-EESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcC-CCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 478888888888999999999999995 677789999999988764321 1 1111110 01234455678999999
Q ss_pred EEEEEEeCCCcc-eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 82 YSCTVRNMVAED-TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 82 Y~C~~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
|+|.+.+..+.. +..+.|.|...+...........+..|+.+.|.|.+..+.|.+.+.|++++..+..........
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~--- 163 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR--- 163 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE---
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc---
Confidence 999999987754 4566777765443322222324567899999999974578999999999999887654332221
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceee-eEEEEEEeecCCCCCeeeee
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARY-SSKLQVKGNLNRLPPSYTLV 211 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~l~v~~~~~~~~p~~~~~ 211 (243)
.+.|.|.++..+|+|.|+|.|.|..|.... .+.|.|. .+|.+...
T Consensus 164 -~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~-----~~P~~~~~ 209 (212)
T 2v9r_A 164 -GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL-----ERPSFVKA 209 (212)
T ss_dssp -TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE-----C-------
T ss_pred -CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE-----eCchHhhh
Confidence 357999999999999999999999998665 4889998 66665543
No 41
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.96 E-value=7e-28 Score=192.91 Aligned_cols=229 Identities=17% Similarity=0.207 Sum_probs=163.7
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE-CCeeecCCCceEEEEeeeeceEEEEeecCCCCCe
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLK-DGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG 80 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 80 (243)
+.|.|..||.+...+....+.+|+.+.|.|.+. +.+.+.+.|++ ++..+....++.... ...|.|.+++.+|+|
T Consensus 107 ~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~~~~~~v~W~~~~g~~l~~~~~~~~~~----~~~L~i~~~~~~d~G 181 (524)
T 2ec8_A 107 IYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLT-DPEVTNYSLKGCQGKPLPKDLRFIPDP----KAGIMIKSVKRAYHR 181 (524)
T ss_dssp EEEECCCSSCSBCCCCCCCEETTSCEEECCCBS-CCCCSCEEEECSSSCCCCSSCEEEEET----TTEEEEESCCGGGTT
T ss_pred EEEEECCCCcccccccceEEEcCCeEEEECcCC-CCccceEEEEccCCcCcCCCCceeECC----CccEEEeccchhhCC
Confidence 456777777777667778899999999999995 66668999998 777776655443322 457999999999999
Q ss_pred -eEEEEEEeCCCcc-eeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEec--CCCC
Q psy11132 81 -NYSCTVRNMVAED-TQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPL--SPRF 151 (243)
Q Consensus 81 -~Y~C~~~~~~~~~-~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~--~~~~ 151 (243)
.|+|.+.+..+.. +..+.|.|. .+|.+...+.. ..+.+|+.+.|.|.+. +.|.+. +.|++++..+ ....
T Consensus 182 ~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~-~~v~~G~~v~L~C~~~-g~p~p~~i~W~~~~~~~~~~~~~ 259 (524)
T 2ec8_A 182 LCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKAS-YLLREGEEFTVTCTIK-DVSSSVYSTWKRENSQTKLQEKY 259 (524)
T ss_dssp CEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSE-EEEETTSCEEEEEEEE-ESSTTCEEEEEETTCSCCCCEEE
T ss_pred ceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCc-ceEEcCCcEEEEEEEe-cCCCcEEEEEEeCCCCCcccccc
Confidence 9999999876654 447788886 44444333322 4577899999999995 777665 9999999874 2221
Q ss_pred CeeEEe--eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecC-----CCCCeeeeeccceeeeccCccc
Q psy11132 152 PVNVSD--LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLN-----RLPPSYTLVFSQASYMSTSYYS 224 (243)
Q Consensus 152 ~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~-----~~~p~~~~~~~~~~~~~~~~~~ 224 (243)
...... .....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|...+. ..+....+..+..+.+.|....
T Consensus 260 ~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g 339 (524)
T 2ec8_A 260 NSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEA 339 (524)
T ss_dssp EEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEE
T ss_pred ccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEee
Confidence 111110 112357899999999999999999999999988888888872110 0111244556778888898766
Q ss_pred cc--c-cceEEeCCee
Q psy11132 225 FE--Q-DSWMIDNENY 237 (243)
Q Consensus 225 ~~--~-~~W~~~~~~~ 237 (243)
.| . +.|+++|..+
T Consensus 340 ~P~p~~v~W~k~g~~~ 355 (524)
T 2ec8_A 340 FPKPEHQQWIYMNRTF 355 (524)
T ss_dssp ESCCCEEEEESSSCBC
T ss_pred cCCCcEEEEEECCeec
Confidence 55 5 9999998764
No 42
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.95 E-value=1.8e-27 Score=165.82 Aligned_cols=176 Identities=18% Similarity=0.336 Sum_probs=133.2
Q ss_pred cCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE-CCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCC
Q psy11132 13 SPTNPERTLNVGERASLICSITKGDIPLTIKWLK-DGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVA 91 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 91 (243)
...+....+.+|+.+.|.|.+. +.|. .+.|++ ++..+....+....... ....|.|.+++.+|+|.|+|.+.+..+
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~-~~p~-~v~W~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAI-GEPE-SIDWYNPQGEKIISTQRVVVQKEG-VRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEE-ECCS-EEEEECTTSCBCCCCSSEEEEEET-TEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EecCCceEEecCCcEEEEEEee-cCCe-eEEEEeCCCCccCCCceEEEECCC-CeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 3345566789999999999995 5566 899999 77777766666554432 246899999999999999999999877
Q ss_pred cc-eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCC--CCCeeEEeeccceeEEEEe
Q psy11132 92 ED-TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP--RFPVNVSDLDSFSSLLSIN 168 (243)
Q Consensus 92 ~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~~l~i~ 168 (243)
.. +..+.|.|..+|.+...... ..+..|+.+.|.|.+ .+.|.+.+.|++++..+.. ....... ....|.|.
T Consensus 83 ~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~----~~~~L~i~ 156 (189)
T 2v44_A 83 QTQEATVVLEIYQKLTFREVVSP-QEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAML----ANNNLQIL 156 (189)
T ss_dssp CEEEEEEEEEEECCCEEESCCCS-EEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEECCCTTEEEC----TTSCEEET
T ss_pred CcEEEEEEEEEecCCceeecCCc-EEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEeccCCCCEEEe----cCCcEEEE
Confidence 64 67788888887766543332 456789999999999 5899999999999987753 2222211 13479999
Q ss_pred ecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 169 SVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 169 ~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
++..+|+|.|+|.|.|..|.......+.|
T Consensus 157 ~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 157 NINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp TCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999999876655444443
No 43
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.95 E-value=2e-26 Score=188.63 Aligned_cols=214 Identities=18% Similarity=0.299 Sum_probs=159.4
Q ss_pred eEEEec---CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 3 VIFSTV---PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 3 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
.|.|.. +|.+.... ...+.+|+.+.|.|.+. + |.+.+.|+++|..+....++.+.. ....|.|.+++.+|+
T Consensus 103 ~l~V~~~~~~p~i~~~~-~~~v~~g~~v~l~C~~~-~-p~~~v~W~~~g~~l~~~~~~~~~~---~~~~L~i~~~~~~d~ 176 (642)
T 1e07_A 103 QFRVYPELPKPSISSNN-SKPVEDKDAVAFTCEPE-T-QDATYLWWVNNQSLPVSPRLQLSN---GNRTLTLFNVTRNDT 176 (642)
T ss_pred EEEecccCCCCcEEccC-ceeEecCCcEEEEEECC-C-CCeeEEEEECCeECCCCCceEEcC---CCCEEEEeCCCcccC
Confidence 345554 34444432 35578899999999985 5 788999999999987766554332 246899999999999
Q ss_pred eeEEEEEEeCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee
Q psy11132 80 GNYSCTVRNMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL 158 (243)
Q Consensus 80 G~Y~C~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~ 158 (243)
|.|+|.+.+..+. .+..+.|.|..+|...........+.+|+.+.|.|.+ .|.|.+.+.|+++|..+..
T Consensus 177 G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~-~g~p~~~i~W~~~g~~i~~--------- 246 (642)
T 1e07_A 177 ASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHA-ASNPPAQYSWFVNGTFQQS--------- 246 (642)
T ss_pred eeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEc-CCCCCcEEEEEECCeEccc---------
Confidence 9999999998775 3566888888766554433344567899999999999 7999999999999988743
Q ss_pred ccceeEEEEeecCCCCCeeEEEEEEccCcceeee--EEEEEEeecCCCCCee------eeeccceeeeccCccccc-ccc
Q psy11132 159 DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS--SKLQVKGNLNRLPPSY------TLVFSQASYMSTSYYSFE-QDS 229 (243)
Q Consensus 159 ~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~--~~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~~~-~~~ 229 (243)
...|.|.++..+|+|.|+|.|.|..|....+ +.+.|... ..+|.+ .+..++.+.+.|.....+ .+.
T Consensus 247 ---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~--~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p~~v~ 321 (642)
T 1e07_A 247 ---TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAE--PPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYL 321 (642)
T ss_pred ---CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEcc--CCCCEEEcCCceeEecCCcEEEEEECCCCCccEE
Confidence 2568999999999999999999998876544 44555422 123332 233456688888776554 899
Q ss_pred eEEeCCee
Q psy11132 230 WMIDNENY 237 (243)
Q Consensus 230 W~~~~~~~ 237 (243)
|+++|+.+
T Consensus 322 W~~~g~~l 329 (642)
T 1e07_A 322 WWVNNQSL 329 (642)
T ss_pred EEECCccC
Confidence 99998654
No 44
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.95 E-value=2.4e-27 Score=198.98 Aligned_cols=221 Identities=29% Similarity=0.447 Sum_probs=170.0
Q ss_pred eEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeE
Q psy11132 3 VIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 3 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 82 (243)
.|.|..||.+...+....+.+|+++.|.|.+. +.|.+.+.|+++|..+... ...|.|.+++.+|+|.|
T Consensus 337 ~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~-g~p~~~v~W~k~g~~~~~~-----------~~~L~i~~v~~~d~G~Y 404 (816)
T 3dmk_A 337 VLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYT-GNPIKTVSWMKDGKAIGHS-----------ESVLRIESVKKEDKGMY 404 (816)
T ss_dssp EEEECEEEEEEEESSEEECCTTSCEEEEEEEE-EECCCEEEEEETTEECSCC-----------SSEEEESSCCGGGCEEE
T ss_pred EEEEcCCCceeeCCCceEecCCCCEEEEEEEe-ccCCCEEEEEECCEECCCC-----------CCEEEEcCCCHHHCEEE
Confidence 46666777777667778899999999999995 7788899999999887543 45699999999999999
Q ss_pred EEEEEeCCCcceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee-
Q psy11132 83 SCTVRNMVAEDTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL- 158 (243)
Q Consensus 83 ~C~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~- 158 (243)
+|.+.|..+.......+.|.. +|.+... .....+..|+.+.|.|.+ .|.|.+.+.|++++..+...........
T Consensus 405 ~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~-~~~~~v~~G~~v~L~C~~-~g~p~p~v~W~~~g~~l~~~~~~~~~~~~ 482 (816)
T 3dmk_A 405 QCFVRNDRESAEASAELKLGGRFDPPVIRQA-FQEETMEPGPSVFLKCVA-GGNPTPEISWELDGKKIANNDRYQVGQYV 482 (816)
T ss_dssp EEEEECSSCEEEECCEEECCCSSCCCEEEEE-CCCEEECSSSCEEEEEEE-ECSSCCEEEEEETTEECCSCTTEEEEEEE
T ss_pred EEEEECCCCcEEEEEEEEEccccCCCceEec-CcceEEcCCCCEEEEEEE-ecCCCCEEEEEECCEECCCCCCcccccEE
Confidence 999999888766666676642 3333322 222456789999999999 6899999999999999876655433221
Q ss_pred ---ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecC-CCCCeeeeeccceeeeccCccccc--ccceEE
Q psy11132 159 ---DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLN-RLPPSYTLVFSQASYMSTSYYSFE--QDSWMI 232 (243)
Q Consensus 159 ---~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~ 232 (243)
....+.|.|.++..+|+|.|+|.|.|..|....++.|.|...+. ..++...+..++.+.+.|.....+ .+.|++
T Consensus 483 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k 562 (816)
T 3dmk_A 483 TVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWER 562 (816)
T ss_dssp CTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEE
T ss_pred ecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEE
Confidence 12235799999999999999999999999988888888873221 122334556788889999876554 899999
Q ss_pred eCCee
Q psy11132 233 DNENY 237 (243)
Q Consensus 233 ~~~~~ 237 (243)
+|..+
T Consensus 563 ~~~~l 567 (816)
T 3dmk_A 563 DNRAL 567 (816)
T ss_dssp TTEES
T ss_pred CCeEc
Confidence 98654
No 45
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.95 E-value=3.7e-27 Score=167.99 Aligned_cols=169 Identities=22% Similarity=0.353 Sum_probs=136.1
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
..+.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ...|.|.+++..|+|.|+|.+.
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~ 85 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRA-TGHPFVQYQWFKMNKEIPNGN----------TSELIFNAVHVKDAGFYVCRVN 85 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEE-TTTTSSEEEEEETTEECTTCC----------SSEEEETTCCGGGCEEEEEEEE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeee-cCCCCCEEEEEECCEECCCCC----------CCEEEEccCChhhCeEeEEEEE
Confidence 35677778888999999999999999 477888999999998876542 5679999999999999999999
Q ss_pred eCCCcc-eeEEEEEEEcCCC---------------ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC
Q psy11132 88 NMVAED-TQVQRLIVNVPPK---------------IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 151 (243)
Q Consensus 88 ~~~~~~-~~~~~l~v~~~p~---------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~ 151 (243)
+..+.. +..+.|.|...+. +... .....+..|+.+.|.|.+ .+.|.+.+.|++++..+....
T Consensus 86 n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~~~~ 163 (218)
T 3k0w_A 86 NNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVE-PTSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHET 163 (218)
T ss_dssp CTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEEC-CCCEEECTTCCEEEECEE-EBSSCCEEEEEETTEECTTCC
T ss_pred cCCCCceeeEEEEEEEccCcccccccccccCCCceEEEC-CCceeecCCCcEEEEEEe-cccCCCeEEEEECCEECCCCC
Confidence 987653 5667788876532 1111 122456789999999999 689999999999999887543
Q ss_pred CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc-eeeeEEEEEEe
Q psy11132 152 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-ARYSSKLQVKG 199 (243)
Q Consensus 152 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~~~l~v~~ 199 (243)
...|.|.++..+|+|.|+|.|.|..|. .+..+.|.|.+
T Consensus 164 ----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 164 ----------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp ----------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred ----------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 357999999999999999999998887 45678888874
No 46
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.95 E-value=2.4e-27 Score=173.44 Aligned_cols=203 Identities=16% Similarity=0.197 Sum_probs=154.7
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
+|.+...+....+.+|+.+.|.|.+. +.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~-~~~~~~~~~W~~~g~~~~~~-----------~~~l~i~~~~~~d~G~Y~C~~~ 68 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVL-HLPGSSSTQWFLNGTATQTS-----------TPSYRITSASVNDSGEYRCQRG 68 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECS-SCCCTTCEEEEETTEECSCC-----------SSEEEESSCCGGGCEEEEEEES
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECC-CCCCCceEEEEECCEEeecc-----------CCeEEEecCCcccCeEEEEEEe
Confidence 36677777777899999999999995 66665 99999999887643 4569999999999999999998
Q ss_pred eCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEE
Q psy11132 88 NMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSI 167 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i 167 (243)
+..+. ..+.|.|..++... ......+.+|+.+.|.|.+..+.|.+.+.|++++..+... .....|.|
T Consensus 69 ~~~~s--~~~~l~v~~~~~~~--~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~---------~~~~~l~i 135 (262)
T 3rjd_A 69 LSGRS--DPIQLEIHRGWLLL--QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF---------HWNSNLTI 135 (262)
T ss_dssp SSCCC--CCEEEEEECSSEEE--EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE---------EECCCEEE
T ss_pred cCCcc--ccEEEEEeccceEe--cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc---------CCCCeEEE
Confidence 75543 45667776554322 2222456789999999999667888999999999876421 11356899
Q ss_pred eecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCee------eeeccceeeeccCccccc-------ccceEEeC
Q psy11132 168 NSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSY------TLVFSQASYMSTSYYSFE-------QDSWMIDN 234 (243)
Q Consensus 168 ~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~~~-------~~~W~~~~ 234 (243)
.+++.+|+|.|+|.|.|..+.....+.+.|.... .+|.+ .+..++.+.+.|.....+ .+.|+++|
T Consensus 136 ~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~--~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~ 213 (262)
T 3rjd_A 136 LKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF--PAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGS 213 (262)
T ss_dssp SSCCGGGCEEEEEEEESSSEEEEECEEEEEECSS--CCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETT
T ss_pred EECChhhCEEEEEEEeCCCCccccceEEEeccCC--CCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCC
Confidence 9999999999999999999888888888887321 23333 345677888999887654 37899988
Q ss_pred CeeE
Q psy11132 235 ENYV 238 (243)
Q Consensus 235 ~~~~ 238 (243)
..+.
T Consensus 214 ~~~~ 217 (262)
T 3rjd_A 214 KTLR 217 (262)
T ss_dssp EEEE
T ss_pred cEec
Confidence 7654
No 47
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.95 E-value=3.3e-27 Score=183.01 Aligned_cols=227 Identities=21% Similarity=0.272 Sum_probs=162.9
Q ss_pred eeEEEecCCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec-CCCceEEEEeeeeceEEEEeecCCCC-
Q psy11132 2 LVIFSTVPPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD-NSAALSITHVDQYNSMLVIDSVSARH- 78 (243)
Q Consensus 2 ~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d- 78 (243)
+.|.+..+|.+... .....+.+|+.+.|.|.+..+.|.+.+.|++++.... ...+.... ....|.|.+++..|
T Consensus 108 ~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~~~~l~i~~v~~~d~ 183 (404)
T 3p3y_A 108 IRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQG----HNGDLYFSNVMLQDM 183 (404)
T ss_dssp EEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEEC----TTSCEEESSCCSGGG
T ss_pred EEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEc----CCCcEEEEeeeeccC
Confidence 35677777765443 4457789999999999985578888999999875433 33333221 24579999999999
Q ss_pred CeeEEEEEEeCCCcc---eeEEEEEEEcCCCcccccc---------CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEe
Q psy11132 79 SGNYSCTVRNMVAED---TQVQRLIVNVPPKIESFAF---------PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKP 146 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~~---~~~~~l~v~~~p~~~~~~~---------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~ 146 (243)
.|.|+|.+.+..+.. ...+.+.+...+......+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..
T Consensus 184 ~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~~~~ 262 (404)
T 3p3y_A 184 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA-SGVPTPDIAWYKKGGD 262 (404)
T ss_dssp SSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCB-CCSSCCEEEEEETTBC
T ss_pred CcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEE-CCCCCCcEEEEECCEE
Confidence 599999999887652 2334556653322111110 11236689999999999 6889999999999998
Q ss_pred cCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec--CCCCCeeeeeccceeeeccCccc
Q psy11132 147 LSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL--NRLPPSYTLVFSQASYMSTSYYS 224 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~--~~~~p~~~~~~~~~~~~~~~~~~ 224 (243)
+...... .......|.|.++..+|+|.|+|.|.|..|.....+.|.|...+ ...|....+..++.+.+.|...+
T Consensus 263 ~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 338 (404)
T 3p3y_A 263 LPSDKAK----FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANG 338 (404)
T ss_dssp CCTTTEE----EEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEE
T ss_pred CCCCccc----ccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccc
Confidence 8755331 11224689999999999999999999999998888888887422 11233345566788889998766
Q ss_pred cc--ccceEEeCCee
Q psy11132 225 FE--QDSWMIDNENY 237 (243)
Q Consensus 225 ~~--~~~W~~~~~~~ 237 (243)
.| .+.|+++|..+
T Consensus 339 ~p~p~v~W~~~g~~~ 353 (404)
T 3p3y_A 339 NPKPTVQWMVNGEPL 353 (404)
T ss_dssp ESCCEEEEEETTEEG
T ss_pred cCCCceEEEECCEec
Confidence 54 89999998654
No 48
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=3.3e-27 Score=179.74 Aligned_cols=212 Identities=18% Similarity=0.230 Sum_probs=145.3
Q ss_pred CCCcccccCCeEEEEEEeeCCCC-----------CceeEEEECCee------ec---CCCceEEEEeeeeceEEEEeecC
Q psy11132 16 NPERTLNVGERASLICSITKGDI-----------PLTIKWLKDGRY------LD---NSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~-----------~~~v~W~~~~~~------~~---~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
...+.+.+|+.+.|.|.+. +.| .+.+.|++++.. +. ...++. .....|.|.+++
T Consensus 14 ~~~v~v~~G~~v~L~C~~~-~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~ 87 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLF-EHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS-----KEKDVLWFRPTL 87 (349)
T ss_dssp CCCCEEETTSCEEEECTCC-CCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE-----EETTEEEESSCC
T ss_pred eeeEEEecCCeEEEEcccc-ccccccccccccCCCceEEEEECCCCCcccccccccccCceEe-----ecCCEEEEccCC
Confidence 4567799999999999985 444 379999998842 11 111211 125689999999
Q ss_pred CCCCeeEEEEEEeCCCcceeEEEEEEEcCCCcccccc---CCCCCCCCCcEEEEEEee----cCCCCCEEEEEeCCEecC
Q psy11132 76 ARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAF---PFDGLPEGARTRVICGVT----HGDPPLTIRWLKDGKPLS 148 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~~g~~~~l~C~~~----~~~p~~~~~W~~~~~~~~ 148 (243)
.+|+|.|+|.+.+..+.....+.|.|..++....... ....+..|+.+.|.|.+. .+.|.+.+.|++++..+.
T Consensus 88 ~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~ 167 (349)
T 4dep_C 88 LNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQ 167 (349)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECC
T ss_pred hhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECC
Confidence 9999999999999888877788889887665432211 113467899999999741 367899999999999886
Q ss_pred CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccC-cce---eeeEEEEEEeecC-CCCCee---------eeeccc
Q psy11132 149 PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA-AQA---RYSSKLQVKGNLN-RLPPSY---------TLVFSQ 214 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-g~~---~~~~~l~v~~~~~-~~~p~~---------~~~~~~ 214 (243)
........ ...|.|.++..+|+|.|+|.|.|.. |.. ...+.+.|..... ..+|.+ .+..+.
T Consensus 168 ~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~ 242 (349)
T 4dep_C 168 NFNNVIPE-----GMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGE 242 (349)
T ss_dssp SCSSEEEE-----TTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC--------------
T ss_pred Cccceeec-----CCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCC
Confidence 54322211 2679999999999999999999987 443 4556666653211 114443 344566
Q ss_pred eeeeccCcc------cccccceEEeCCeeE
Q psy11132 215 ASYMSTSYY------SFEQDSWMIDNENYV 238 (243)
Q Consensus 215 ~~~~~~~~~------~~~~~~W~~~~~~~~ 238 (243)
.+.+.|... ..+.+.|+++|..+.
T Consensus 243 ~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~ 272 (349)
T 4dep_C 243 ELLIPCTVYFSFLMDSRNEVWWTIDGKKPD 272 (349)
T ss_dssp --CCCEEEEECCCTTCCCEEEEESSCC---
T ss_pred cEEEEEEEEEccCCCCCCEEEEEECCEEcc
Confidence 788899776 335899999997654
No 49
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.95 E-value=2.5e-27 Score=175.98 Aligned_cols=193 Identities=24% Similarity=0.399 Sum_probs=147.5
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+.|.+..+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+........... ....|.|.+++.+|+|.
T Consensus 93 ~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~ 169 (291)
T 1qz1_A 93 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVV-SSLPPTIIWKHKGRDVILKKDVRFIVL--SNNYLQIRGIKKTDEGT 169 (291)
T ss_dssp EEEEEECCSEEEECCSSEEEETTSCEEECCEEE-CSSCCEEEEEETTSCSSTTCCTTEEEC--TTSCEEETTCCGGGCEE
T ss_pred EEEEeeccccccCCCCcccccCCCeEEEEEEec-cCCCCEEEEEECCEEcccCCCceEEEc--cCCcEEEccCccccCeE
Confidence 457778888888877788899999999999995 778889999999988754332222211 24679999999999999
Q ss_pred EEEEEEeCCCc--ceeEEEEEEEcCCCcccccc-CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe-eEEe
Q psy11132 82 YSCTVRNMVAE--DTQVQRLIVNVPPKIESFAF-PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV-NVSD 157 (243)
Q Consensus 82 Y~C~~~~~~~~--~~~~~~l~v~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~ 157 (243)
|+|.+.+..+. ....+.+.|..+|.+..... ....+..|+.+.|.|.+ .|.|.+.+.|++++..+...... ....
T Consensus 170 Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~~~~ 248 (291)
T 1qz1_A 170 YRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDA-DGFPEPTMSWTKDGEPIENEEEDDEKHI 248 (291)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEE-EEESCCEEEEEETTEECCCC--CCSSEE
T ss_pred EEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEE-EEeCCCcEEEEECCEECcCCCCCCcceE
Confidence 99999987643 34566777777666543321 12357789999999999 58899999999999988765310 0111
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 249 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 249 FSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 12234689999999999999999999999999888988887
No 50
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.95 E-value=1.4e-26 Score=189.53 Aligned_cols=218 Identities=18% Similarity=0.273 Sum_probs=161.4
Q ss_pred eeEEEecCCCc-cCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCe
Q psy11132 2 LVIFSTVPPKL-SPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG 80 (243)
Q Consensus 2 ~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 80 (243)
+.|.|..+|.. ...+....+.+|+.+.|.|.+. +.|.+.+.|+++|..+.. ...|.|.+++.+|+|
T Consensus 373 ~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~i~W~~~g~~~~~------------~~~L~i~~~~~~d~G 439 (642)
T 1e07_A 373 VILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA-SNPPAQYSWLIDGNIQQH------------TQELFISNITEKNSG 439 (642)
T ss_pred EEEEEEcCCCCCeecCCceEecCCCcEEEEEEcC-ccCCCeEEEEECCEEcCC------------CceEEEccCChhhCe
Confidence 45677766643 3445567789999999999995 788889999999987753 345999999999999
Q ss_pred eEEEEEEeCCCcceeE--EEEEEEcCCCcc-ccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEe
Q psy11132 81 NYSCTVRNMVAEDTQV--QRLIVNVPPKIE-SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 81 ~Y~C~~~~~~~~~~~~--~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~ 157 (243)
.|+|.+.|..+..... +.+.|..++..+ ........+..|+.+.|.|.+. + |.+.+.|++++..+..........
T Consensus 440 ~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~-~-~~~~i~W~~~g~~l~~~~~~~~~~ 517 (642)
T 1e07_A 440 LYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPE-A-QNTTYLWWVNGQSLPVSPRLQLSN 517 (642)
T ss_pred EEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECC-C-CCcEEEEEECCEeCCCCCcEEEcC
Confidence 9999999998765443 455555432211 1122224567899999999994 4 789999999999987665443322
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEEeecC---CCCCeeeeeccceeeeccCcccc--cccceE
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVKGNLN---RLPPSYTLVFSQASYMSTSYYSF--EQDSWM 231 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~~~~~---~~~p~~~~~~~~~~~~~~~~~~~--~~~~W~ 231 (243)
....|.|.++..+|+|.|+|.|.|..|... ..+.|.|...+. ..|....+..++.+.+.|...+. +.++|+
T Consensus 518 ---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~ 594 (642)
T 1e07_A 518 ---GNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWR 594 (642)
T ss_pred ---CCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEE
Confidence 246899999999999999999999999754 367888873221 12233455667888899987655 489999
Q ss_pred EeCCee
Q psy11132 232 IDNENY 237 (243)
Q Consensus 232 ~~~~~~ 237 (243)
+||..+
T Consensus 595 ~~g~~i 600 (642)
T 1e07_A 595 INGIPQ 600 (642)
T ss_pred ECCEEC
Confidence 998754
No 51
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=4.3e-27 Score=188.31 Aligned_cols=229 Identities=17% Similarity=0.247 Sum_probs=151.3
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCC-ceeEEEECCeeecCCCceEEEEe-e----eeceEEEEeecCCCCCe
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIP-LTIKWLKDGRYLDNSAALSITHV-D----QYNSMLVIDSVSARHSG 80 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~-~----~~~~~l~i~~~~~~d~G 80 (243)
..+|.+...+....+.+|+.+.|.|.+.+..|+ +.+.|+++|..+........... . ...+.|.|.+++.+|+|
T Consensus 112 ~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 191 (523)
T 2rcj_C 112 KANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHR 191 (523)
T ss_pred CcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCc
Confidence 356777666666667789999999999644343 49999999988765432211100 1 01247999999999999
Q ss_pred eEEEEEEeCCCcceeEEEEEE----EcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCeeE
Q psy11132 81 NYSCTVRNMVAEDTQVQRLIV----NVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 81 ~Y~C~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~~ 155 (243)
.|+|.+.|..+.....+.+.+ ..+|.+.... +...+.+|+.+.|.|.+.+..|.+ .+.|++++..+........
T Consensus 192 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~-~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~ 270 (523)
T 2rcj_C 192 SYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLA-PSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAV 270 (523)
T ss_pred eEEEEEEecCcccccceeeeecCCCCcCCEEEecC-CCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcE
Confidence 999999998776555444332 1233333222 224467899999999995334766 8999999987542111111
Q ss_pred Eeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec--CCCCCee--eeeccceeeeccCcccc---
Q psy11132 156 SDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL--NRLPPSY--TLVFSQASYMSTSYYSF--- 225 (243)
Q Consensus 156 ~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~--~~~~p~~--~~~~~~~~~~~~~~~~~--- 225 (243)
...+ ...+.|.|.++..+| |.|+|.|.|..|.......+.+...+ ...+|.. .+..++.+.+.|...++
T Consensus 271 ~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~ 349 (523)
T 2rcj_C 271 LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHE 349 (523)
T ss_pred ecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCC
Confidence 1111 114579999999999 99999999999987666666543111 0112211 14557788899988654
Q ss_pred ---cccceEEeCCee
Q psy11132 226 ---EQDSWMIDNENY 237 (243)
Q Consensus 226 ---~~~~W~~~~~~~ 237 (243)
+.++|+++|..+
T Consensus 350 ~~~~~v~W~k~g~~l 364 (523)
T 2rcj_C 350 DPQVKFNWYVDGVQV 364 (523)
T ss_pred CCceEEEEEECCeEc
Confidence 289999998765
No 52
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.95 E-value=1.6e-27 Score=164.37 Aligned_cols=167 Identities=21% Similarity=0.275 Sum_probs=127.4
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCC-ceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIP-LTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
..+|.+...+....+.+|++++|.|.+. +.+. ..+.|++++..+... ...|.|.+++.+|+|.|+|.
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~i~W~~~~~~~~~~-----------~~~L~i~~v~~~d~G~Y~C~ 69 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGN-NFFEVSSTKWFHNGSLSEET-----------NSSLNIVNAKFEDSGEYKCQ 69 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTT-CC----CCEEEETTEECSCC-----------SSEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCC-CCCCcceEEEEECCeECCCC-----------ceEEEEeccceecCEEEEEE
Confidence 4578888878888899999999999985 5554 479999999877642 56799999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 86 VRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
+.+..+ +..+.|.|..++.... .....+.+|+.+.|.|.+..+.|.+.+.|+++|..+.... ....|
T Consensus 70 ~~~~~~--s~~~~l~V~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~---------~~~~L 136 (176)
T 1f2q_A 70 HQQVNE--SEPVYLEVFSDWLLLQ--ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY---------ENHNI 136 (176)
T ss_dssp CTTSSC--CCCEEEEEECSSEEEE--ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC---------CSSEE
T ss_pred cCCccc--cccEEEEEeCcceeec--CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec---------CCCeE
Confidence 987554 3456667764333222 2224567899999999995567778999999999885321 14679
Q ss_pred EEeecCCCCCeeEEEEEEccCcc-eeeeEEEEEE
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQ-ARYSSKLQVK 198 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~-~~~~~~l~v~ 198 (243)
.|.++..+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 137 ~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 137 SITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 99999999999999999997543 4566888888
No 53
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.95 E-value=1.6e-27 Score=169.79 Aligned_cols=190 Identities=22% Similarity=0.356 Sum_probs=136.8
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCc--eEEEEee-eeceEEEEeecCCCCCeeEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAA--LSITHVD-QYNSMLVIDSVSARHSGNYS 83 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~--~~~~~~~-~~~~~l~i~~~~~~d~G~Y~ 83 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... ....... .....|.|.+++..|+|.|+
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~-g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVE-GKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEE-CSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcC-CCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 4678888888888999999999999995 777889999999998865421 1111111 11122368889999999999
Q ss_pred EEEEeCCCcc-eeEEEEEEEc-CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee---
Q psy11132 84 CTVRNMVAED-TQVQRLIVNV-PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL--- 158 (243)
Q Consensus 84 C~~~~~~~~~-~~~~~l~v~~-~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~--- 158 (243)
|.+.+..+.. +..+.|.|.. +|.+... .....+..|+.+.|.|.+..+.|.+.+.|++++..+...........
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 164 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVLRDDFRVE-PKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEECCSCSBC-CCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSE
T ss_pred EEEecCCCccccccceEEEEEeCCCcEEC-CCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcE
Confidence 9999987754 4456666655 3333322 22255778999999999855889999999999998874322111000
Q ss_pred -ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 159 -DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 159 -~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
....+.|.|.++..+|+|.|+|.|.|..|....+..+.+.
T Consensus 165 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 165 RIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 0123579999999999999999999999988777555544
No 54
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=9.5e-28 Score=179.72 Aligned_cols=221 Identities=16% Similarity=0.188 Sum_probs=148.6
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC-----------------CCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN-----------------SAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
.++.+.+|++++|.|.+..+.+.+.+.|+|++..... ..+...........+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3567889999999999864555568999986532210 12222222222356799999999999
Q ss_pred eeEEEEEEeC-CCcceeEEEEEEEcCCCccccccC-CCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEe
Q psy11132 80 GNYSCTVRNM-VAEDTQVQRLIVNVPPKIESFAFP-FDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 80 G~Y~C~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~ 157 (243)
|.|+|.+.+. .+..+....+.+...|.......+ ......|+.+.|.|.+..|.|.+.+.|++++..+..........
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTS
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeee
Confidence 9999999875 445666777777777665443322 23445688999999876789999999999998775432111111
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCcceee--eEEEEEEeecC---CCCCeeeeeccceeeeccCccccc---ccc
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY--SSKLQVKGNLN---RLPPSYTLVFSQASYMSTSYYSFE---QDS 229 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~l~v~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~---~~~ 229 (243)
.....+.|.|..+..+|+|.|+|.|.|..+.... ++.|.|...+. ..++......++.+.+.|...+.| .+.
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~ 246 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSV 246 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEE
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEE
Confidence 1122457999999999999999999998876543 34444442110 011122334456778899887664 689
Q ss_pred eEEeCCee
Q psy11132 230 WMIDNENY 237 (243)
Q Consensus 230 W~~~~~~~ 237 (243)
|+|++..+
T Consensus 247 W~k~~~~~ 254 (308)
T 4fom_A 247 WSRLDGQW 254 (308)
T ss_dssp CCBSSSCC
T ss_pred EEECCeEC
Confidence 99988654
No 55
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=3.1e-28 Score=188.36 Aligned_cols=227 Identities=15% Similarity=0.172 Sum_probs=155.9
Q ss_pred EEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEE
Q psy11132 4 IFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYS 83 (243)
Q Consensus 4 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 83 (243)
|.+..||.+...+....+.+|+.+.|.|.+.++.|.+.+.|+++|..+....... . .....++|.|.+++.+|+|.|+
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~-~-~~~~~~~L~i~~~~~~D~G~Y~ 78 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNA-A-LRKDEGSLVFLRPQASDEGHYQ 78 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTE-E-ECTTSCCEEESSCCGGGCEEEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceE-E-EecCCceEEEecCCCCCCcEEE
Confidence 3567899999998899999999999999997447888999999999887654311 1 1122567999999999999999
Q ss_pred EEEEeCCCcce-eEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCE---ecCC----CCCeeE
Q psy11132 84 CTVRNMVAEDT-QVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK---PLSP----RFPVNV 155 (243)
Q Consensus 84 C~~~~~~~~~~-~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~---~~~~----~~~~~~ 155 (243)
|.+.+..+... ..+.|.+...+.+...+ ....+.+|+.+.|.|.+..+.|.+.+.|++++. .... ......
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~~~~p~~~~-~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 1bih_A 79 CFAETPAGVASSRVISFRKTYLIASPAKT-HEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157 (395)
T ss_dssp EEEEETTEEEECCCEEEEEEEEECCCCEE-EEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEE
T ss_pred EEEEeCCCeEEeEEEEEEEEEeecCCcCC-cceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEE
Confidence 99999877542 33555554322222222 225567999999999964688999999999862 1111 111111
Q ss_pred EeeccceeEEEEeecCCCCCe---eEEEEEEccCcceeeeEEEEEEeecC--------C-----CCCeeeeeccceeeec
Q psy11132 156 SDLDSFSSLLSINSVSAAHSG---EYTCVASNTAAQARYSSKLQVKGNLN--------R-----LPPSYTLVFSQASYMS 219 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g---~y~C~~~n~~g~~~~~~~l~v~~~~~--------~-----~~p~~~~~~~~~~~~~ 219 (243)
...+.|.|.++..+|+| .|+|.|.|..|............... . .+....+..++.+.+.
T Consensus 158 ----~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~ 233 (395)
T 1bih_A 158 ----GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIY 233 (395)
T ss_dssp ----CTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEE
T ss_pred ----cCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEE
Confidence 11346899999999999 99999999988765443332221100 0 1223456678888899
Q ss_pred cCcccc--cccceEEeCCee
Q psy11132 220 TSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 220 ~~~~~~--~~~~W~~~~~~~ 237 (243)
|..... +.+.|+++|..+
T Consensus 234 C~~~g~p~~~i~W~~~g~~~ 253 (395)
T 1bih_A 234 CMYGSNPMGYPNYFKNGKDV 253 (395)
T ss_dssp EEEECSSCCCCEEEETTEEC
T ss_pred EEeccCCCCeEEEEECCEEc
Confidence 977544 489999998654
No 56
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=6.4e-27 Score=187.31 Aligned_cols=228 Identities=16% Similarity=0.187 Sum_probs=152.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEEee---eeceEEEEeecCCCCCeeEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITHVD---QYNSMLVIDSVSARHSGNYS 83 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~ 83 (243)
.+|.+........+.+|+.+.|.|.+.+..|.+ .+.|++++..+...........+ ...+.|.|.+++.+| |.|+
T Consensus 218 ~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~ 296 (523)
T 2rcj_C 218 KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 296 (523)
T ss_pred cCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEE
Confidence 456655444445578999999999996444656 89999999775421111111100 114589999999999 9999
Q ss_pred EEEEeCCCcceeEEEEEEEcCCCccccccCCCC-CCCCCcEEEEEEeecCCCC----CEEEEEeCCEecCCCCCeeEEee
Q psy11132 84 CTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDG-LPEGARTRVICGVTHGDPP----LTIRWLKDGKPLSPRFPVNVSDL 158 (243)
Q Consensus 84 C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~p~----~~~~W~~~~~~~~~~~~~~~~~~ 158 (243)
|.|.|..+.......+.+...|.+....+.... +.+|+.+.|.|.+. |.|+ +.+.|+++|..+...........
T Consensus 297 C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~-g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~ 375 (523)
T 2rcj_C 297 CNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVV-DVSHEDPQVKFNWYVDGVQVHNAKTKPREQQ 375 (523)
T ss_pred EEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEe-cccCCCCceEEEEEECCeEccCCccCCceec
Confidence 999999988766666666555554333322233 67899999999995 6442 59999999998875432211111
Q ss_pred -c---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc--
Q psy11132 159 -D---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF-- 225 (243)
Q Consensus 159 -~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~-- 225 (243)
. ...+.|.|..+..+|+|.|+|.|.|..+.......+.+.. ....+|.+.+. .+..+.+.|...++
T Consensus 376 ~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~-~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p 454 (523)
T 2rcj_C 376 YNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAK-GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYP 454 (523)
T ss_pred CCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEccc-CCCCCCEEEEeCCChHHccCCceEEEEEEEeeEC
Confidence 1 1135688999999999999999999887665444444210 01245554432 23347899988765
Q ss_pred c--ccceEEeCCeeE
Q psy11132 226 E--QDSWMIDNENYV 238 (243)
Q Consensus 226 ~--~~~W~~~~~~~~ 238 (243)
+ .+.|++||+.+.
T Consensus 455 ~~~~v~W~k~g~~~~ 469 (523)
T 2rcj_C 455 SDIAVEWESNGQPEN 469 (523)
T ss_pred CCCEEEEEECCEECC
Confidence 2 799999987653
No 57
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.95 E-value=2.4e-27 Score=182.98 Aligned_cols=226 Identities=20% Similarity=0.290 Sum_probs=159.2
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCC--CceeEEEECCeeecC-----CCceEEEEeeeeceEEEEeec
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDI--PLTIKWLKDGRYLDN-----SAALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~~~~~~-----~~~~~~~~~~~~~~~l~i~~~ 74 (243)
+.|.+..+|.+...+....+.+|+.+.|.|.+.+..+ .+.+.|++++..+.. ..+.... ....|.|.++
T Consensus 96 ~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v 171 (388)
T 2v5m_A 96 VHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVL----PSGELHIREV 171 (388)
T ss_dssp EEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEEC----TTSCEEESSC
T ss_pred eEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEc----cCCcEEEecC
Confidence 4567777888777777788999999999999863332 278999999876632 1222221 2467999999
Q ss_pred CCCCC-eeEEEEEEeCCCcce----eEEEEEEEcCCC-----ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCC
Q psy11132 75 SARHS-GNYSCTVRNMVAEDT----QVQRLIVNVPPK-----IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDG 144 (243)
Q Consensus 75 ~~~d~-G~Y~C~~~~~~~~~~----~~~~l~v~~~p~-----~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~ 144 (243)
+.+|. |.|+|.+.+..+... ....|.|..+.. ..........+.+|+.+.|.|.+ .|.|.+.+.|++++
T Consensus 172 ~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~~ 250 (388)
T 2v5m_A 172 GPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA-QGFPAPSFRWYKFI 250 (388)
T ss_dssp CGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC-EEESCCEEEEEEEC
T ss_pred CccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC-CCCCCCEEEEEecC
Confidence 99999 999999998754321 123456655421 11111122346689999999998 58899999999975
Q ss_pred EecCC------CCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec--CCCCCeeeeecccee
Q psy11132 145 KPLSP------RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL--NRLPPSYTLVFSQAS 216 (243)
Q Consensus 145 ~~~~~------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~--~~~~p~~~~~~~~~~ 216 (243)
..+.. ..... ...+.|.|.++..+|+|.|+|.|.|..|.....+.|.|...+ ...|+...+..++.+
T Consensus 251 ~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~ 325 (388)
T 2v5m_A 251 EGTTRKQAVVLNDRVK-----QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPA 325 (388)
T ss_dssp TTSSCEEECCCSSSEE-----EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCE
T ss_pred CCCcccccccccCcee-----cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCE
Confidence 43321 11111 124579999999999999999999999998888888887322 112334455667888
Q ss_pred eeccCccccc--ccceEEeCCee
Q psy11132 217 YMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 217 ~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.+.|...+.| .+.|+++|..+
T Consensus 326 ~l~C~~~g~p~p~i~W~~~g~~i 348 (388)
T 2v5m_A 326 VFTCQYTGNPIKTVSWMKDGKAI 348 (388)
T ss_dssp EEEEEEEEECCCEEEEEETTEEC
T ss_pred EEEEEeccccCCeEEEEECCEEC
Confidence 8999876554 89999998754
No 58
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=3.2e-27 Score=182.13 Aligned_cols=225 Identities=19% Similarity=0.306 Sum_probs=154.3
Q ss_pred EEEecCCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeE
Q psy11132 4 IFSTVPPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 4 l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 82 (243)
|.+..++.+... .....+.+|+.+.|.|....+.+.+.+.|++++..+....+.... .....|.|.+++.+|+|.|
T Consensus 96 l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y 172 (384)
T 3kld_A 96 LQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVS---QETGNLYIAKVEKSDVGNY 172 (384)
T ss_dssp EEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEEC---TTTCCEEESSCCGGGCEEE
T ss_pred EEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEE---cCCCcEEEeecCHHHCceE
Confidence 344444443332 345678999999999976545667899999999887644432221 1245799999999999999
Q ss_pred EEEEEeCCCccee---EEEEEEE-------cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCC-EecCCCC
Q psy11132 83 SCTVRNMVAEDTQ---VQRLIVN-------VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDG-KPLSPRF 151 (243)
Q Consensus 83 ~C~~~~~~~~~~~---~~~l~v~-------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~-~~~~~~~ 151 (243)
+|.+.|..+.... ...+.+. ..|.+.........+.+|+.+.|.|.+ .|.|.+.+.|++++ ..+....
T Consensus 173 ~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~~~~~~~~~~ 251 (384)
T 3kld_A 173 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFA-LGNPVPTILWRRADGKPIARKA 251 (384)
T ss_dssp EEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTCCCCCTTC
T ss_pred EEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEE-eecCCCcEEEEeCCCccccccc
Confidence 9999998764321 1122221 112222111222345789999999999 58999999999954 4443321
Q ss_pred CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecC--CCCCeeeeeccceeeeccCccccc--c
Q psy11132 152 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLN--RLPPSYTLVFSQASYMSTSYYSFE--Q 227 (243)
Q Consensus 152 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~--~ 227 (243)
. .......|.|.++..+|+|.|+|.|.|..|.......|.|...+. ..+....+..+..+.+.|...+.| .
T Consensus 252 ~-----~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~ 326 (384)
T 3kld_A 252 R-----RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPT 326 (384)
T ss_dssp E-----ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCE
T ss_pred e-----ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCe
Confidence 1 112246799999999999999999999999988888888873221 122334556678888999877654 8
Q ss_pred cceEEeCCee
Q psy11132 228 DSWMIDNENY 237 (243)
Q Consensus 228 ~~W~~~~~~~ 237 (243)
+.|++||..+
T Consensus 327 i~W~k~g~~l 336 (384)
T 3kld_A 327 YRWLKNGDPL 336 (384)
T ss_dssp EEEEETTEEC
T ss_pred EEEEECCEEC
Confidence 9999998764
No 59
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.95 E-value=4.7e-27 Score=165.56 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=129.0
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.+|.+...+....+.+|+++.|.|.+. +.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~-~~p~~~~v~W~k~g~~l~~~-----------~~~L~i~~v~~~D~G~Y~C~a 73 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGA-YSPEDQSTQWFHNESLISSQ-----------ASSYFIDAATVDDSGEYRCQT 73 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECC-SSSSCCCEEEEETTEEESCC-----------SSEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCC-CCCCCcEEEEEECCEEcccC-----------ccEEEEecccccCCEEEEEEe
Confidence 456666667667899999999999995 55544 59999999887653 267999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEE
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLS 166 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (243)
.+. ..+..+.|.|..+|.+...+ ...+.+|+.+.|.|.+..+.|.+.+.|++++..+... .....|.
T Consensus 74 ~n~--~~s~~~~l~V~~~p~~~~~~--~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~---------~~~~~L~ 140 (204)
T 3sgj_C 74 QLS--TLSDPVQLEVHIGWLLLQAP--RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF---------HHNSDFY 140 (204)
T ss_dssp TTS--BCCCCEEEEEECSSEEEECS--CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE---------EECCCEE
T ss_pred CCC--cccccEEEEEecCceEecCC--ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc---------cCCceEE
Confidence 863 44556778887766543322 2456789999999999555577899999999875321 1246799
Q ss_pred EeecCCCCCeeEEEEEEcc-CcceeeeEEEEEEee
Q psy11132 167 INSVSAAHSGEYTCVASNT-AAQARYSSKLQVKGN 200 (243)
Q Consensus 167 i~~~~~~d~g~y~C~~~n~-~g~~~~~~~l~v~~~ 200 (243)
|.++..+|+|.|+|.|.|. .+..+..+.|.|.+.
T Consensus 141 i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 141 IPKATLKDSGSYFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred ECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCc
Confidence 9999999999999999994 445566788888743
No 60
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=1.5e-27 Score=183.88 Aligned_cols=170 Identities=24% Similarity=0.375 Sum_probs=138.2
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECC-eeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcce
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDG-RYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDT 94 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 94 (243)
+....+.+|+.+.|.|.+. +.|.+.+.|++++ ..+....+. ......|.|.+++.+|+|.|+|.|.|..|...
T Consensus 212 ~~~~~~~~G~~v~l~C~~~-g~P~p~i~W~k~~~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 285 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFAL-GNPVPTILWRRADGKPIARKARR-----HKSNGILEIPNFQQEDAGSYECVAENSRGKNV 285 (384)
T ss_dssp CSEEEEETTSCEEEEEEEE-EESCCEEEEEETTCCCCCTTCEE-----CTTSCEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCceEecCCCcEEEEEEEe-ecCCCcEEEEeCCCcccccccee-----cCCCcEEEECCCChhhCEEEEEEEEcCCCeEE
Confidence 4556788999999999995 7888899999954 444332211 11256899999999999999999999999888
Q ss_pred eEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCC
Q psy11132 95 QVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAH 174 (243)
Q Consensus 95 ~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 174 (243)
....|.|..+|.+...... ..+..|+.+.|.|.+ .|.|.+.+.|+++|..+......... ...|.|..+..+|
T Consensus 286 ~~~~l~v~~~P~~~~~~~~-~~v~~g~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~~-----~~~L~i~~v~~~D 358 (384)
T 3kld_A 286 AKGQLTFYAQPNWVQIIND-IHVAMEESVFWECKA-NGRPKPTYRWLKNGDPLLTRDRIQIE-----QGTLNITIVNLSD 358 (384)
T ss_dssp EEEEEEEEEEEEEEECCCC-EEECTTCCEEEECEE-EEESCCEEEEEETTEECCCBTTEEEE-----TTEEEESSCCGGG
T ss_pred EEEEEEEecCCccccCCCc-eEecCCCCEEEEeEC-CccCCCeEEEEECCEECCCCccEEEe-----CCEEEEeecChhh
Confidence 8888998887766544332 567789999999999 58999999999999998765544332 3579999999999
Q ss_pred CeeEEEEEEccCcceeeeEEEEEE
Q psy11132 175 SGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 175 ~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+|.|+|.|.|..|....++.|.|.
T Consensus 359 ~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 359 AGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEEEEeCCceEEeceEEEEe
Confidence 999999999999999999998876
No 61
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.6e-27 Score=174.10 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=151.9
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|++++|.|.+. + .+.|++++..+ .. . ...+..|.|.+++.+|+|.|+|.+
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~-~----~i~W~~~~~~~----~~--~--~~~~~~L~i~~~~~~d~G~Y~C~~ 76 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDP-D----FVRWTFKTYFN----EM--V--ENKKNEWIQEKAEATRTGTYTCSN 76 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECT-T----EEEEEEECSSS----CE--E--EECSSEEEETTCCGGGCEEEEEEE
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCC-C----cEEEecCCcce----ee--e--cCCCceEEEeccCHHhCeEEEEEe
Confidence 4578888878888899999999999984 4 89999999766 11 1 111478999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEE-eCCEecCCCCCeeEEeeccceeE
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWL-KDGKPLSPRFPVNVSDLDSFSSL 164 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~-~~~~~~~~~~~~~~~~~~~~~~~ 164 (243)
.+ +. +..+.|.|..+|.+.. ......+.+|+.+.|.|.+. + |. +.+.|+ ++|..+.......... ...
T Consensus 77 ~n--g~-~~~~~l~V~~~~~~~~-~~~~~~~~~g~~v~l~C~~~-~-p~~~~v~W~~~~g~~l~~~~~~~~~~----~~~ 146 (290)
T 2o26_X 77 SN--GL-TSSIYVFVRDPAKLFL-VGLPLFGKEDSDALVRCPLT-D-PQVSQYSLIECDGKSLPTDLTFVPNP----KAG 146 (290)
T ss_dssp SS--SC-EEEEEEEEECSSCCBC-CCCCEEEETTSCEEECCCBS-C-CSCEEEEEEETTSCCCCTTCEEEEET----TTE
T ss_pred eC--Cc-cEEEEEEEeCCCcccc-cccceEEecCCeEEEeCcCC-C-CCCceEEEEeCCCcCCCCCCceeeCC----CCC
Confidence 98 43 6778888888776653 23335567899999999994 5 76 899995 6777776543322211 246
Q ss_pred EEEeecCCCCCe-eEEEEEEccCccee-eeEEEEEEeecCCCCCeee-------eeccceeeeccCccccc--c-cceEE
Q psy11132 165 LSINSVSAAHSG-EYTCVASNTAAQAR-YSSKLQVKGNLNRLPPSYT-------LVFSQASYMSTSYYSFE--Q-DSWMI 232 (243)
Q Consensus 165 l~i~~~~~~d~g-~y~C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~-------~~~~~~~~~~~~~~~~~--~-~~W~~ 232 (243)
|.|.++..+|+| .|+|.|.|..+... ..+.+.|.... ..+|.+. +..++.+.+.|.....+ . +.|++
T Consensus 147 L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~-~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~ 225 (290)
T 2o26_X 147 ITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI-KAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLK 225 (290)
T ss_dssp EEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC-CSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEE
T ss_pred EEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC-CCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEec
Confidence 899999999999 99999999866543 35677765322 1344443 34567778888876654 4 99999
Q ss_pred eCCe
Q psy11132 233 DNEN 236 (243)
Q Consensus 233 ~~~~ 236 (243)
+|..
T Consensus 226 ~~~~ 229 (290)
T 2o26_X 226 MNPQ 229 (290)
T ss_dssp ESSS
T ss_pred CCCC
Confidence 9987
No 62
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=7.6e-27 Score=181.00 Aligned_cols=187 Identities=26% Similarity=0.344 Sum_probs=149.1
Q ss_pred eeEEEecCCCc------cCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecC
Q psy11132 2 LVIFSTVPPKL------SPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 2 ~~l~v~~~p~~------~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
+.+.+..+|.+ ...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.......... ....|.|.+++
T Consensus 208 ~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~---~~~~L~i~~~~ 283 (403)
T 3laf_A 208 AEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVS-GYPPPSFTWLRGEEVIQLRSKKYSLL---GGSNLLISNVT 283 (403)
T ss_dssp EEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEE-EESCCEEEEEETTEECCCSSSSEEEE---TTTEEEECSCC
T ss_pred eeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcC-CCCCCeEEEEECCeeccCCCceEEEC---CccEEEEeCCC
Confidence 34556655542 3345567788999999999996 77778999999998876543322111 24679999999
Q ss_pred CCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeE
Q psy11132 76 ARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~ 155 (243)
.+|+|.|+|.+.|..+..+..+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.+.|++++..+........
T Consensus 284 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~ 361 (403)
T 3laf_A 284 DDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSN-LYAYESMDIEFECAV-SGKPVPTVNWMKNGDVVIPSDYFQI 361 (403)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCC-EECCTTCCEEECCEE-EEESCCEEEEEETTEECCCSSSEEE
T ss_pred HHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcc-eEEecCCeEEEEEEE-eeccCCEEEEEECCEECCCCCcEEE
Confidence 99999999999999888888899999887766544433 557789999999999 5889999999999998876654433
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
. ..+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 362 ~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 362 V----GGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp E----TTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred e----cCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 2 23679999999999999999999999999999999887
No 63
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=3.4e-27 Score=177.37 Aligned_cols=224 Identities=17% Similarity=0.140 Sum_probs=150.0
Q ss_pred eEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeE
Q psy11132 3 VIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 3 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 82 (243)
...+..+|.+...+. ..+.+|++++|.|.+. +. .+.+.|+|+|..+..... .......|.|.+++.+|+|.|
T Consensus 18 ~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~-~~~~~W~k~g~~~~~~~~-----~~~~~~~L~I~~v~~~D~G~Y 89 (316)
T 3vh8_G 18 HMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYR-HR-FNNFMLYKEDRIHIPIFH-----GRIFQESFNMSPVTTAHAGNY 89 (316)
T ss_dssp ------CCEEEEESC-SEEETTSCEEEEEEBT-TB-CCSEEEEESSCSSSCHHH-----HCCBSSCEEECSCCGGGCEEE
T ss_pred ccCCCCCCEeeccCC-CccCCCCCEEEEEEcc-CC-CceEEEEeCCCccceeec-----CCcceEEEEECCCCcccCeEE
Confidence 345567888887766 5688999999999995 44 568999999987543211 011256799999999999999
Q ss_pred EEEEEeCC-----CcceeEEEEEEEcCCCcc-ccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 83 SCTVRNMV-----AEDTQVQRLIVNVPPKIE-SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 83 ~C~~~~~~-----~~~~~~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
+|.+.+.. ...+..+.|.|...+..+ ....+...+.+|+.+.|.|.+ . .+++.+.|++++..+.........
T Consensus 90 ~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~ 167 (316)
T 3vh8_G 90 TCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWS-D-IMFEHFFLHKEGISKDPSRLVGQI 167 (316)
T ss_dssp EEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEE-S-SCCSEEEEEETTCCSCCEEEECEE
T ss_pred EEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcC-C-CCCcEEEEEECCCccccceeeeee
Confidence 99998532 234556777776543211 111222336789999999998 3 456799999999877543211111
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCcce-----eeeEEEEEEeecCCCCCeeee------eccceeeeccCccc-
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA-----RYSSKLQVKGNLNRLPPSYTL------VFSQASYMSTSYYS- 224 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-----~~~~~l~v~~~~~~~~p~~~~------~~~~~~~~~~~~~~- 224 (243)
........|.|.+++.+|+|.|+|.|.|..|.. ...+.|.|.+. ..+|.+.. ..++.+.+.|....
T Consensus 168 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~--~~~p~i~~~~~~~v~~G~~v~L~C~~~~~ 245 (316)
T 3vh8_G 168 HDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGP--YEKPSLSAQPGPKVQAGESVTLSCSSRSS 245 (316)
T ss_dssp ETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECS--SCCCEEEEESCSCCCTTSCCEEEEEESSC
T ss_pred cCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCC--CCCCeEEeCCCCeecCCCcEEEEEECCCC
Confidence 122235789999999999999999999988742 44456666532 24555543 34667788886642
Q ss_pred ccccceEEeCCeeE
Q psy11132 225 FEQDSWMIDNENYV 238 (243)
Q Consensus 225 ~~~~~W~~~~~~~~ 238 (243)
.+.+.|+++|..+.
T Consensus 246 ~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 246 YDMYHLSREGGAHE 259 (316)
T ss_dssp CSEEEEEETTSSCC
T ss_pred CcEEEEEECCCcCC
Confidence 34899999987643
No 64
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.95 E-value=1.2e-27 Score=169.32 Aligned_cols=184 Identities=22% Similarity=0.392 Sum_probs=138.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec------------CCCceEEEEeeeeceEEEEeecC
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD------------NSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
.++.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+. ...+.... ...|.|.+++
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~L~i~~~~ 76 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYS-GFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-----PTGITFKSVT 76 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEE-SCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-----TTEEECSCCC
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEe-CCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-----ccEEEEeeCC
Confidence 355666667778899999999999996 66888999999876521 12222222 3789999999
Q ss_pred CCCCeeEEEEEEeCCC--cceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe
Q psy11132 76 ARHSGNYSCTVRNMVA--EDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~ 153 (243)
.+|+|.|+|.+.+..+ ..+..+.|.|..+|.+...... ..+..|+.+.|.|.+..+.|.+.+.|++++..+......
T Consensus 77 ~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~ 155 (209)
T 1nbq_A 77 REDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIP-SSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKS 155 (209)
T ss_dssp TTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCB-SEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSS
T ss_pred HHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccc-cceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcccc
Confidence 9999999999998855 3456778888888876655433 456789999999996568899999999999887654321
Q ss_pred e------EEeeccceeEEEEeecCCCCCeeEEEEEEccCcce--eeeEEEEEE
Q psy11132 154 N------VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSSKLQVK 198 (243)
Q Consensus 154 ~------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~~l~v~ 198 (243)
. ........+.|.|.++..+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 156 TRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp SSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred ceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 0 00111234679999999999999999999999987 344555554
No 65
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.95 E-value=4.7e-27 Score=166.76 Aligned_cols=178 Identities=23% Similarity=0.360 Sum_probs=132.6
Q ss_pred CCCcccccCCeEEEEEEeeCCCC----CceeEEEEC----------------CeeecC-----CCceEEEE--eeeeceE
Q psy11132 16 NPERTLNVGERASLICSITKGDI----PLTIKWLKD----------------GRYLDN-----SAALSITH--VDQYNSM 68 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~----~~~v~W~~~----------------~~~~~~-----~~~~~~~~--~~~~~~~ 68 (243)
+..+.+.+|+++.|.|.+. +.+ .+.+.|+++ +..+.. ..+..+.. ......+
T Consensus 7 ~~~v~v~~G~~v~L~C~~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFT-LSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp EEEEEEETTSCEEECCBCC-CCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CceEEEecCCCEEEEEEEe-cCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 3456789999999999985 444 469999983 333321 22332221 1123577
Q ss_pred EEEeecCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC
Q psy11132 69 LVIDSVSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS 148 (243)
Q Consensus 69 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~ 148 (243)
|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.+...... ..+..|+.+.|.|.+..+.|.+.+.|++++....
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~ 164 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVD-GSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQT 164 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEE-SCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeee-cceecCCcEEEEecCCCCCCCCEEEEEECCCCCc
Confidence 999999999999999999998888888899999988877654433 4577899999999985588999999999543222
Q ss_pred CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 149 PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
...... .......|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 165 ~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 165 MPTPWL---AEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp CCGGGG---GGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred cCccce---eccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 111110 11124589999999999999999999999999888888877
No 66
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.95 E-value=5.2e-27 Score=180.75 Aligned_cols=224 Identities=18% Similarity=0.207 Sum_probs=157.9
Q ss_pred eEEEecCCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC--CCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 3 VIFSTVPPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN--SAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 3 ~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
.|.+..+|.+... .....+.+|+.+.|.|.+..+.|.+.+.|++++..+.. ..+... ......|.|.+++.+|+
T Consensus 94 ~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~ 170 (382)
T 1cs6_A 94 SLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFV---SQTTGNLYIAKTEASDL 170 (382)
T ss_dssp EEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEE---CTTTCCEEESSCCGGGC
T ss_pred EEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEE---ecCceEEEEEeeCcccC
Confidence 4555555554433 55677899999999999755667789999999876532 222211 11246799999999999
Q ss_pred eeEEEEEEeCCCcc-----eeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC
Q psy11132 80 GNYSCTVRNMVAED-----TQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS 148 (243)
Q Consensus 80 G~Y~C~~~~~~~~~-----~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~ 148 (243)
|.|+|.+.+..+.. +..+.|.+.. +|.+.........+..|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 171 G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~i~W~~~~~~~~ 249 (382)
T 1cs6_A 171 GNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFA-FGNPVPQIKWRKLDGSQT 249 (382)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEE-EEESCCEEEEEECCSCCS
T ss_pred eeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEE-ccCCCCEEEEEECCcccc
Confidence 99999999876432 2234455432 22222211222456789999999999 588999999999887765
Q ss_pred CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec--CCCCCeeeeeccceeeeccCcccc-
Q psy11132 149 PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL--NRLPPSYTLVFSQASYMSTSYYSF- 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~--~~~~p~~~~~~~~~~~~~~~~~~~- 225 (243)
.. .......|.|.++..+|+|.|+|.|.|..|.....+.|.|...+ ...+....+..++.+.+.|...+.
T Consensus 250 ~~-------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p 322 (382)
T 1cs6_A 250 SK-------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKP 322 (382)
T ss_dssp CC-------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEES
T ss_pred cE-------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeec
Confidence 31 11225679999999999999999999999998888888887322 112333455667888899987655
Q ss_pred -cccceEEeCCee
Q psy11132 226 -EQDSWMIDNENY 237 (243)
Q Consensus 226 -~~~~W~~~~~~~ 237 (243)
+.+.|+++|..+
T Consensus 323 ~p~v~W~~~g~~~ 335 (382)
T 1cs6_A 323 RPAVRWLRDGQPL 335 (382)
T ss_dssp CCEEEEEETTEEC
T ss_pred CCEEEEEECCEEC
Confidence 489999998654
No 67
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=1.2e-27 Score=179.70 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=149.4
Q ss_pred CCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec----CCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCC
Q psy11132 15 TNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD----NSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMV 90 (243)
Q Consensus 15 ~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~----~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 90 (243)
....+.+.+|+.+.|.|.+.+..+.+.+.|++++..+. ...++... ...|.|.+++.+|+|.|+|.+.+..
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (315)
T 1itb_B 11 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH-----KEKLWFVPAKVEDSGHYYCVVRNSS 85 (315)
T ss_dssp CCCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC-----SSBEECTTCCGGGCSCCEECCCSSS
T ss_pred CceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc-----CCeEEECCCChhhCEEEEEEEeCCc
Confidence 34467789999999999986443367999999986432 12232221 4579999999999999999999988
Q ss_pred CcceeEEEEEEEc-CCCcccccc--CCCCCCCCCcEEEEEEee-----cCCCCCEEEEEeCCEecCCCCCeeEEeeccce
Q psy11132 91 AEDTQVQRLIVNV-PPKIESFAF--PFDGLPEGARTRVICGVT-----HGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 162 (243)
Q Consensus 91 ~~~~~~~~l~v~~-~p~~~~~~~--~~~~~~~g~~~~l~C~~~-----~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 162 (243)
+.....+.+.+.. +|.+...+. ....+..|+.+.|.|.+. .|.|.+.+.|++++..+......... ..
T Consensus 86 g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~----~~ 161 (315)
T 1itb_B 86 YCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSG----VK 161 (315)
T ss_dssp CCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEE----ET
T ss_pred eEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEee----cC
Confidence 7766666666543 333321111 113466899999999873 58899999999999998654322211 13
Q ss_pred eEEEEeecCCCCCeeEEEEEE-ccCcce---eeeEEEEEEeecCCCCCee--------eeeccceeeeccCccccc--cc
Q psy11132 163 SLLSINSVSAAHSGEYTCVAS-NTAAQA---RYSSKLQVKGNLNRLPPSY--------TLVFSQASYMSTSYYSFE--QD 228 (243)
Q Consensus 163 ~~l~i~~~~~~d~g~y~C~~~-n~~g~~---~~~~~l~v~~~~~~~~p~~--------~~~~~~~~~~~~~~~~~~--~~ 228 (243)
..|.|.++..+|+|.|+|.|. |..|.. ...+.+.+.......+|.+ .+..+..+.+.|...+.| .+
T Consensus 162 ~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i 241 (315)
T 1itb_B 162 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIA 241 (315)
T ss_dssp TEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEE
T ss_pred ceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCee
Confidence 579999999999999999999 787866 3344444432222244443 445677788888776554 79
Q ss_pred ceEEeCCee
Q psy11132 229 SWMIDNENY 237 (243)
Q Consensus 229 ~W~~~~~~~ 237 (243)
.|++||..+
T Consensus 242 ~W~~~g~~i 250 (315)
T 1itb_B 242 YWKWNGSVI 250 (315)
T ss_dssp EEEETTEEC
T ss_pred EEEECCEEC
Confidence 999998654
No 68
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.3e-26 Score=169.92 Aligned_cols=189 Identities=19% Similarity=0.197 Sum_probs=141.8
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCC-ceeEEE-ECCeeecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIP-LTIKWL-KDGRYLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~v~W~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
+.|.|..+|.+...+....+.+|+.+.|.|.+. + |. +.+.|+ ++|..+....++.... ...|.|.+++.+|+
T Consensus 84 ~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~-p~~~~v~W~~~~g~~l~~~~~~~~~~----~~~L~i~~v~~~d~ 157 (290)
T 2o26_X 84 IYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLT-D-PQVSQYSLIECDGKSLPTDLTFVPNP----KAGITIKNVKRAYH 157 (290)
T ss_dssp EEEEEECSSCCBCCCCCEEEETTSCEEECCCBS-C-CSCEEEEEEETTSCCCCTTCEEEEET----TTEEEEESCCGGGT
T ss_pred EEEEEeCCCcccccccceEEecCCeEEEeCcCC-C-CCCceEEEEeCCCcCCCCCCceeeCC----CCCEEEecccHHHC
Confidence 467788888777667778889999999999995 4 66 899995 5777776554433221 35799999999999
Q ss_pred e-eEEEEEEeCCCc-ceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEec----C
Q psy11132 80 G-NYSCTVRNMVAE-DTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPL----S 148 (243)
Q Consensus 80 G-~Y~C~~~~~~~~-~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~----~ 148 (243)
| .|+|.+.|..+. .+..+.|.|. .+|.+...+.. ..+..|+.+.|.|.+. |.|.+. +.|++++..+ .
T Consensus 158 G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~-~~v~~G~~v~l~C~~~-g~p~p~~i~W~~~~~~~~~~~~ 235 (290)
T 2o26_X 158 RLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETS-HLLKKGDTFTVVCTIK-DVSTSVNSMWLKMNPQPQHIAQ 235 (290)
T ss_dssp TCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSB-CCCCTTCCEEEEEEEE-ESSTTCEEEEEEESSSEEECCC
T ss_pred CCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCc-ceEecCCcEEEEEEEe-cCCcceeEEEecCCCCCcccee
Confidence 9 999999998554 3445777776 45555433333 5788999999999995 888885 9999998773 3
Q ss_pred CCCCeeEEe--eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 149 PRFPVNVSD--LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 149 ~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
......... .....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 287 (290)
T 2o26_X 236 VKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVV 287 (290)
T ss_dssp EECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred ecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEE
Confidence 222221111 12235789999999999999999999999999888888887
No 69
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.95 E-value=9.4e-27 Score=163.21 Aligned_cols=173 Identities=16% Similarity=0.195 Sum_probs=124.0
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.+|.+...+.. .+.+|++++|.|.+. + +.+.+.|+|++..+...... .........|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGT-L-EAREYRLDKEESPAPWDRQN--PLEPKNKARFSIPSMTEDYAGRYRCYYR 78 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECC-T-TCCEEEEEETTSCSCSEEEC--CCSSSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCC-C-CCCEEEEEECCCCCcccccc--cccCCceEEEEeccCCcccCceEEEEEe
Confidence 46677766665 789999999999984 4 56799999999876532111 0011225789999999999999999999
Q ss_pred eCCC--cceeEEEEEEEcCCCcc-ccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeE
Q psy11132 88 NMVA--EDTQVQRLIVNVPPKIE-SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSL 164 (243)
Q Consensus 88 ~~~~--~~~~~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 164 (243)
|..+ ..+..+.|.|...+..+ ....+...+.+|+.++|.|.+. + +++.+.|++++..+.................
T Consensus 79 n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 3p2t_A 79 SPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSR-S-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAE 156 (196)
T ss_dssp ETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEE-E-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEE
T ss_pred CCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecC-C-CCCEEEEEeCCCcccceeecccccccCcceE
Confidence 9877 34666778886532221 1112223567899999999984 5 4568999999987654322222222233578
Q ss_pred EEEeecCCCCCeeEEEEEEccCc
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g 187 (243)
|.|.+++.+|+|.|+|.|.|..+
T Consensus 157 L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 157 FPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEECSCCGGGCEEEEEEEECGGG
T ss_pred EEeCCCcccCCCeEEEEEEcCCC
Confidence 99999999999999999999876
No 70
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.95 E-value=2.1e-26 Score=179.30 Aligned_cols=189 Identities=15% Similarity=0.158 Sum_probs=135.8
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEe-----eeeceEEEEeecCC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHV-----DQYNSMLVIDSVSA 76 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~ 76 (243)
+.|.+..+|.+. +....+.+|+.+.|.|.+.+..|.+.+.|++++..+........... ......|.|.+++.
T Consensus 222 ~~l~V~~~p~~~--~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 299 (423)
T 3qs7_E 222 FTIDLNQTPQTT--LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVAR 299 (423)
T ss_dssp EEEESSSCCCSS--TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCT
T ss_pred EEEEEecCCccC--CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCH
Confidence 456666666653 34677899999999999974477789999999988755432211111 11245799999999
Q ss_pred CCCeeEEEEEEeCCCcceeEEEEEEEcCCCcccccc-CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeE
Q psy11132 77 RHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAF-PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~ 155 (243)
+|+|.|+|.|.|. .+..+.|.|..+|.+...+. ....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+........
T Consensus 300 ~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~ 375 (423)
T 3qs7_E 300 NDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF-KAYPQIRCTWTFSRKSFPCEQKGLD 375 (423)
T ss_dssp TTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEE-EEESCCEEEEEETTEEEECBCCBCS
T ss_pred HHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEE-EEcCCCeEEEEECCEECCCcccccc
Confidence 9999999999987 67778889988776544332 22567889999999999 6899999999999998865421000
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL 201 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~ 201 (243)
....+.......+|+|.|+|.|.|..|....++.|.|.+.+
T Consensus 376 -----~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p 416 (423)
T 3qs7_E 376 -----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGT 416 (423)
T ss_dssp -----SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----
T ss_pred -----CCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCC
Confidence 01122224567789999999999999999999999988543
No 71
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=178.84 Aligned_cols=179 Identities=19% Similarity=0.250 Sum_probs=137.2
Q ss_pred CcccccCCeEEEEEEeeC---------CCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 18 ERTLNVGERASLICSITK---------GDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~---------~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
...+.+|+.+.|.|.+.+ +.|.+.+.|++++..+....+....... ....|.|.+++.+|+|.|+|.+.|
T Consensus 107 ~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n 185 (317)
T 2y25_A 107 KKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTG-EQIWLQINEPTPNDKGKYVMELFD 185 (317)
T ss_dssp HHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECS-SEEEEEEESCCGGGCEEEEEEEEC
T ss_pred ceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccC-CEEEEEECcCCcccCeeEEEEEEe
Confidence 344567888888877632 2678899999999998876665544332 246799999999999999999999
Q ss_pred CCCcceeEEEEEEEc--------------------CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC
Q psy11132 89 MVAEDTQVQRLIVNV--------------------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS 148 (243)
Q Consensus 89 ~~~~~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~ 148 (243)
..+.....+.+.+.. .|.+.........+..|+.+.|.|.+ .|.|.+.+.|++++..+.
T Consensus 186 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~ 264 (317)
T 2y25_A 186 GKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALA 264 (317)
T ss_dssp SSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEE-ECSSCCEEEEEESSSEEC
T ss_pred CCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEE-ecCCCCEEEEEECCEeCC
Confidence 888777666665431 11111111222456789999999999 599999999999999988
Q ss_pred CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 149 PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
...........+....|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 265 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 265 SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 314 (317)
T ss_dssp CCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 76665554443445789999999999999999999999999999999887
No 72
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=7e-27 Score=175.42 Aligned_cols=188 Identities=18% Similarity=0.229 Sum_probs=141.7
Q ss_pred eEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee--eeceEEEEeecCCCCCe
Q psy11132 3 VIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD--QYNSMLVIDSVSARHSG 80 (243)
Q Consensus 3 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G 80 (243)
.|.+..+|.+........+..|+.+.+.|.+.++.|.+.+.|++++..+...........+ ...+.|.|......|.|
T Consensus 111 ~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g 190 (313)
T 4fqp_A 111 WLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGK 190 (313)
T ss_dssp EECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTC
T ss_pred eeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCe
Confidence 4556677877766666778889999999988778888999999998776532221111000 11356889999999999
Q ss_pred eEEEEEEeCCCcc--eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCeeEEe
Q psy11132 81 NYSCTVRNMVAED--TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 81 ~Y~C~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~ 157 (243)
.|+|.+.|..+.. ...+.|.|..+|.+.........+..|+.+.|.|.+ .|.|.| .+.|++++..+.... ..
T Consensus 191 ~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~-~g~P~p~~v~W~~~~~~l~~~~--~~-- 265 (313)
T 4fqp_A 191 NVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDA-RSNPEPTGYNWSTTMGPLPPFA--VA-- 265 (313)
T ss_dssp EEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEE-EEESCCCEEEEEETTBSCCTTE--EE--
T ss_pred eEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEe-cCCCCCcEEEEEECCEECCCce--EE--
Confidence 9999999977654 445566666667665444443456678999999999 588877 799999999876542 11
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
....|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 266 ---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 266 ---QGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp ---ETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ---eCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 13579999999999999999999999999999999988
No 73
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.94 E-value=1.8e-25 Score=163.93 Aligned_cols=195 Identities=16% Similarity=0.220 Sum_probs=142.7
Q ss_pred cccccCCeEEEEEEeeCCCCCc--eeEEEECCeeecCCCceEEEEeeeeceEEEEeec---CCCCCee--EEEEEEeCCC
Q psy11132 19 RTLNVGERASLICSITKGDIPL--TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSV---SARHSGN--YSCTVRNMVA 91 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~G~--Y~C~~~~~~~ 91 (243)
..+.+|+.+.|.|.+.+..|.+ .+.|++++..+... .... ...+.+..+ +..|.|. |+|.+.+..+
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~----~~~~---~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~ 85 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT----VTYG---NDSFSAKASVSVTAEDEGTQRLTCAVILGNQ 85 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCE----EEEC---SSEEEEEEEEEECGGGCEEEEEEEEEEETTE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCce----EeeC---CCeEEEEeecccccccCCcceEEEEEecCCC
Confidence 4688999999999996447766 99999999887651 1111 234555544 7788884 9999999988
Q ss_pred cceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecC
Q psy11132 92 EDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVS 171 (243)
Q Consensus 92 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 171 (243)
.....+.|.|...|...... ....+.+|+.+.|.|.+ . |.+.+.| +|..+.... ..+.|.|..+.
T Consensus 86 ~~~~~~~l~V~~~p~p~~~~-~~~~v~~G~~v~l~C~~-~--p~~~i~W--~g~~~~~~~---------~~~~l~i~~~~ 150 (265)
T 2oz4_A 86 SQETLQTVTIYSFPAPNVIL-TKPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQPLG---------PRAQLLLKATP 150 (265)
T ss_dssp EEEEEEEEEEECCCCCEEEE-SCSEEETTCEEEEEEEC-C--TTSEEEE--SSCSSSCCS---------SEECCEEECCG
T ss_pred CcEEEEEEEEeCCCCceeec-CCceecCCCcEEEEEEc-c--CCCEEEE--CCEEccCCC---------CcEEEEEcccc
Confidence 88888889998755433222 23556789999999998 3 8899999 777663221 24568888888
Q ss_pred CCCCeeEEEEEEccC-ccee---eeEEEEEEeecCC----CCCeeeeeccceeeeccCccccc--ccceEEeCC
Q psy11132 172 AAHSGEYTCVASNTA-AQAR---YSSKLQVKGNLNR----LPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNE 235 (243)
Q Consensus 172 ~~d~g~y~C~~~n~~-g~~~---~~~~l~v~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~ 235 (243)
.+|+|.|+|.|.|.. |... ..+.|.|...+.. .|....+..++.+.+.|...+.| .+.|+++|.
T Consensus 151 ~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 151 EDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp GGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred ccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 999999999998644 6554 5567777643321 23355677788999999987665 899999987
No 74
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.94 E-value=5.2e-26 Score=160.16 Aligned_cols=177 Identities=18% Similarity=0.231 Sum_probs=128.3
Q ss_pred CCCcccccCCeEEEEEEeeCCCCC-----ceeEEEE-CCeeecCCCceEEEEe--eeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 16 NPERTLNVGERASLICSITKGDIP-----LTIKWLK-DGRYLDNSAALSITHV--DQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~-----~~v~W~~-~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
+....+.+|+++.|.|.+. +.+. +.+.|++ ++.......+..+... ......|.|.+++.+|+|.|+|.+.
T Consensus 9 ~~~v~v~~G~~v~L~C~~~-~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFD-RRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp CSEEEEETTSCEEEEEEEC-TTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CcCEEEeCCCcEEEEEEec-CCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 3456788999999999995 6554 7999999 4444433444433221 1134789999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEE
Q psy11132 88 NMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSI 167 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i 167 (243)
+..+.....+.|.|..++..+.... ..+..|+.+.|.|.+ .|.|.+.+.|++++..+.. .......+....+.+
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~~~--~~~~~g~~v~l~C~~-~g~P~p~v~W~~~~~~~~~---~~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDTRI--LEVPGTGEVQLTCQA-RGYPLAEVSWQNVSVPANT---SHIRTPEGLYQVTSV 161 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEEEE--EECTTTCCEEEEEEE-EEBSCCEEEETTCCSCCEE---EEEECTTSCEEEEEE
T ss_pred eCCCcceEEEEEEecCCCCcccEEE--EecCCCCeEEEEEEc-cccCCceEEEEeCCCCccC---ceeeCCCCCEEEEEE
Confidence 9888778888888887654332221 134679999999999 6899999999998765431 111112222356778
Q ss_pred eecCCCCCeeEEEEEEccCcceeeeEEEEEEe
Q psy11132 168 NSVSAAHSGEYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 168 ~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
..+..+|.|.|+|.|.|..|.....+.+.|.+
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 88999999999999999999998888887763
No 75
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.94 E-value=1.1e-26 Score=177.88 Aligned_cols=192 Identities=13% Similarity=0.081 Sum_probs=146.8
Q ss_pred cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEE
Q psy11132 19 RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQR 98 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 98 (243)
..+.+|+.+.|.|.+. +.|.+.+.|++++..+. .....|.|.+++.+|+|.|+|.+.+..+.....+.
T Consensus 106 ~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~ 173 (363)
T 1wio_A 106 THLLQGQSLTLTLESP-PGSSPSVQCRSPRGKNI-----------QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKID 173 (363)
T ss_dssp SSEESBSCEEEEEECC-TTCCCCEEEECSSSCEE-----------EESSEEEECSBCGGGCEECEEEEEETTEEEEECCE
T ss_pred eEEecCCCEEEEEEcC-CCCCCeEEEEcCCCccc-----------ccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEE
Confidence 3578999999999995 67888999999875431 12678999999999999999999987666666677
Q ss_pred EEEEcCCCccccccCCCCCCCCCcEEEEEEeecC-----CCCCEEEEEeCCEecCC--------CCCeeEEee-------
Q psy11132 99 LIVNVPPKIESFAFPFDGLPEGARTRVICGVTHG-----DPPLTIRWLKDGKPLSP--------RFPVNVSDL------- 158 (243)
Q Consensus 99 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-----~p~~~~~W~~~~~~~~~--------~~~~~~~~~------- 158 (243)
+.|..+|... ....+.+|+.+.|.|.+ .+ .|.+.+.|+++|..+.. .........
T Consensus 174 l~v~~~p~~~----~~~~~~~G~~v~l~C~~-~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (363)
T 1wio_A 174 IVVLAFQKAS----SIVYKKEGEQVEFSFPL-AFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQ 248 (363)
T ss_dssp ECEECCSCSE----EEEEEETBCCEEEECCC-CCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCB
T ss_pred EEEecCCCCC----CceEEecCCEEEEEEEE-ecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhh
Confidence 7777655543 12446789999999988 45 67889999999988765 222222110
Q ss_pred --ccceeEEEEeecCCCCCeeEEEEEEcc--CcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCccccc--c--cce
Q psy11132 159 --DSFSSLLSINSVSAAHSGEYTCVASNT--AAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYSFE--Q--DSW 230 (243)
Q Consensus 159 --~~~~~~l~i~~~~~~d~g~y~C~~~n~--~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~--~~W 230 (243)
......|.|.++..+|+|.|+|.|.|. .|.....+.|.|.. ..+..+.+.|.....+ . +.|
T Consensus 249 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-----------v~g~~~~l~C~~~g~p~p~~~i~W 317 (363)
T 1wio_A 249 MGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-----------ATQLQKNLTCEVWGPTSPKLMLSL 317 (363)
T ss_dssp CCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE-----------ECCCSSSEEEEEESSCCTTCCEEE
T ss_pred cccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE-----------ecCCCeeEEEEEccccCCCccEEE
Confidence 112358999999999999999999999 89888888888771 1166678888776553 5 999
Q ss_pred EEeCCeeE
Q psy11132 231 MIDNENYV 238 (243)
Q Consensus 231 ~~~~~~~~ 238 (243)
+++|+.+.
T Consensus 318 ~~~~~~~~ 325 (363)
T 1wio_A 318 KLENKEAK 325 (363)
T ss_dssp ECSSSSCS
T ss_pred EeCCCcee
Confidence 99987654
No 76
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.94 E-value=7.1e-26 Score=167.98 Aligned_cols=191 Identities=20% Similarity=0.279 Sum_probs=142.0
Q ss_pred eeEEEecCCC-ccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEE-CCeeecCCCceEEEEeeeeceEEEEeecCCCC
Q psy11132 2 LVIFSTVPPK-LSPTNPERTLNVGERASLICSITKGDIPL-TIKWLK-DGRYLDNSAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 2 ~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
+.|.|..+|. +...+....+.+|+.+.|.|.+. +.+.+ .+.|++ ++..+....++.... ...|.|.+++.+|
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d 155 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT-DPALKDSVSLMREGGRQVLRKTVYFFSP----WRGFIIRKAKVLD 155 (289)
T ss_dssp EEEEECCSSCSEEESCSEEEEETTSCEEECEEES-CGGGGGSEEEEEGGGEECCTTCCEEEET----TTEEEESSCCGGG
T ss_pred EEEEEeCCCcceecccceEEEecCCceEeEEEcc-CCCcceEEEEEecCCeecCCCccEEECC----CCCEEEeeccccc
Confidence 4567777776 34556678899999999999995 54444 499987 566665555544322 4579999999999
Q ss_pred CeeEEEEEE-eCCCcceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe
Q psy11132 79 SGNYSCTVR-NMVAEDTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 79 ~G~Y~C~~~-~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~ 153 (243)
+|.|+|.+. +..+..+..+.|.|. .+|.+...+.. ..+..|+.+.|.|.+..+.|.+.+.|++++..+......
T Consensus 156 ~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 234 (289)
T 3ejj_X 156 SNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSK-LVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNS 234 (289)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSS-EECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEE
T ss_pred CEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCc-eEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCc
Confidence 999999999 444456677888887 34444433322 445789999999999643789999999999988754322
Q ss_pred eEE-eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 154 NVS-DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 154 ~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
... ......+.|.|.++..+|+|.|+|.|.|..|....++.|.+.
T Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 235 DFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280 (289)
T ss_dssp EECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC
T ss_pred ccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEE
Confidence 111 011125789999999999999999999999999999988876
No 77
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.94 E-value=6.1e-27 Score=178.16 Aligned_cols=181 Identities=20% Similarity=0.256 Sum_probs=143.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCe-eEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG-NYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~ 86 (243)
.+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+...... ........|.|.+++.+|+| .|+|.+
T Consensus 157 ~~P~i~~~~~~~~v~~G~~v~L~C~~~-g~p~p~i~W~~~~~~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~~Y~C~a 232 (347)
T 2ifg_A 157 GVPTLKVQVPNASVDVGDDVLLRCQVE-GRGLEQAGWILTELEQSATVMK---SGGLPSLGLTLANVTSDLNRKNVTCWA 232 (347)
T ss_dssp CCCEEEEECCSSCCBTTCCEEEEEEEE-CSSCCCCCEEESCCCSSEEECC---CCCSSEEEEEEESCCSTTTTCCEEECC
T ss_pred CCCceeccCCceEEeCCCcEEEEEEEe-cCCCCEEEEEcCCceeeccccc---ceecccceEEEeeCChHHCCCeEEEEE
Confidence 477887777788899999999999995 7888899999998764322111 01223578999999999999 999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeec------c
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD------S 160 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~------~ 160 (243)
.+..+..+..+.|.|..+|.+ . . .....|+.+.|.|.+ .|.|.|.+.|+++|..+............ .
T Consensus 233 ~n~~g~~~~~~~l~V~~~P~i-~-~---~~~~~g~~v~l~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 306 (347)
T 2ifg_A 233 ENDVGRAEVSVQVNVSFPASV-Q-L---HTAVEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 306 (347)
T ss_dssp EETTEECCEEECCCCBEEEEE-E-E---CCCEESSSEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCC
T ss_pred EcCCCCEEEEEEEEEcCCCee-e-e---ccCccCceEEEEEEe-eecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcc
Confidence 999888877888888777765 1 1 234578999999999 58899999999999998855443222111 2
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..+.|.|.++..+|+|.|+|.|.|..|....++.+.|.
T Consensus 307 ~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred cceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 35779999999999999999999999999888888877
No 78
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.94 E-value=5.1e-26 Score=156.59 Aligned_cols=166 Identities=14% Similarity=0.188 Sum_probs=125.8
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.+|.+...+....+.+|+.++|.|.+. +.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~-~~p~~~~~~W~~~~~~~~~~-----------~~~L~i~~~~~~d~G~Y~C~~ 73 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGA-YSPEDNSTQWFHNESLISSQ-----------ASSYFIDAATVNDSGEYRCQT 73 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECC-CBTTBCCCEEEETTEEEESS-----------CSEEEESSCCGGGCEEEEEEC
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCC-CCCCCcceEEEECCEEccCC-----------ceEEEEeCCCcccCEEEEEEe
Confidence 467777777777899999999999985 55554 48999999877542 567999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEE
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLS 166 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (243)
.+..+ +..+.|.|..++.... .....+.+|+.+.|.|.+..+.|++.+.|++++..+... .....|.
T Consensus 74 ~n~~~--s~~~~l~V~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~---------~~~~~L~ 140 (175)
T 1fnl_A 74 NLSTL--SDPVQLEVHIGWLLLQ--APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF---------HHNSDFH 140 (175)
T ss_dssp SSSCC--CCCEEEEEECSSEEEE--CSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE---------EECCCEE
T ss_pred eCCcc--cccEEEEEeCCCceee--CCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC---------CCCCEEE
Confidence 87544 4556777764433222 222456789999999999433345699999999876321 1246799
Q ss_pred EeecCCCCCeeEEEEEEccCcc-eeeeEEEEEE
Q psy11132 167 INSVSAAHSGEYTCVASNTAAQ-ARYSSKLQVK 198 (243)
Q Consensus 167 i~~~~~~d~g~y~C~~~n~~g~-~~~~~~l~v~ 198 (243)
|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 141 i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 141 IPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 9999999999999999997654 4566777776
No 79
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=6.8e-26 Score=169.35 Aligned_cols=184 Identities=22% Similarity=0.397 Sum_probs=135.1
Q ss_pred eEEEecC-------CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCc-eEEEEeeeeceEEEEeec
Q psy11132 3 VIFSTVP-------PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAA-LSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 3 ~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~ 74 (243)
.|.|..+ |.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... ...... ....|.|.++
T Consensus 95 ~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~-g~p~~~v~W~k~~~~~~~~~~~~~~~~~--~~~~L~i~~~ 171 (304)
T 2yd9_A 95 KLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAAS-GNPDPEITWFKDFLPVDPSASNGRIKQL--RSGALQIESS 171 (304)
T ss_dssp EEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEE-CSSCCEEEEEETTEECCGGGGTTSEEEC--TTSCEEECSC
T ss_pred EEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECc-cCCCCeEEEEECCEECcCCCCcceEEeC--CCeEEEEccC
Confidence 4556554 5666666777889999999999995 788889999999988865321 111111 2458999999
Q ss_pred CCCCCeeEEEEEEeCCCccee-EEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC
Q psy11132 75 SARHSGNYSCTVRNMVAEDTQ-VQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 150 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~ 150 (243)
+.+|+|.|+|.+.|..+.... ...+.|.. +|.+...+. ...+..|+.+.|.|.+ .|.|.+.+.|++++..+...
T Consensus 172 ~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~~~~l~~~ 249 (304)
T 2yd9_A 172 EETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPM-SHEIMPGGNVNITCVA-VGSPMPYVKWMQGAEDLTPE 249 (304)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCC-CBCCCTTCCEEEEEEE-EEESCCEEEEEETTEECSCS
T ss_pred CcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCC-ceEEcCCCeEEEEEEE-eeeCCCEEEEEECCEECCCc
Confidence 999999999999998876432 24555542 343333222 2567899999999999 58899999999999988765
Q ss_pred CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 151 FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 151 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.... .....|.+.++ +|+|.|+|.|.|..|....++.|.|.
T Consensus 250 ~~~~-----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~ 290 (304)
T 2yd9_A 250 DDMP-----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVK 290 (304)
T ss_dssp SSCC-----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC--
T ss_pred cccc-----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 4321 12345666654 68999999999999999999999988
No 80
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.94 E-value=1.8e-25 Score=181.15 Aligned_cols=214 Identities=14% Similarity=0.105 Sum_probs=153.7
Q ss_pred CCCcccccCCeEEEEEEeeCCCCC---ceeEEEECCeeec--------------CCCceEEEEe-eeeceEEEEeecCCC
Q psy11132 16 NPERTLNVGERASLICSITKGDIP---LTIKWLKDGRYLD--------------NSAALSITHV-DQYNSMLVIDSVSAR 77 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~---~~v~W~~~~~~~~--------------~~~~~~~~~~-~~~~~~l~i~~~~~~ 77 (243)
+..+.+.+|+.+.|.|.+. +.+. ..+.|+|++..+. ...++.+... ..+...|.|.+++.+
T Consensus 7 P~~v~v~~G~~v~L~C~~~-~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 85 (585)
T 2ocw_A 7 PEEVNSVEGNSVSITCYYP-PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (585)
T ss_pred cceeEEecCCcEEEEEeCC-CCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcc
Confidence 5567799999999999985 4443 3899999875321 1123333221 222467999999999
Q ss_pred CCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC----C----
Q psy11132 78 HSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS----P---- 149 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~----~---- 149 (243)
|+|.|+|.+.+..+..+..+.|.|..+|.+...+.. ..+.+|+.+.|.|.+..+.+++.+.|++++.... .
T Consensus 86 D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~ 164 (585)
T 2ocw_A 86 DSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKV-YTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 164 (585)
T ss_pred cCEEEEEEcccCCCCceEEEEEEEecCccccCCCcc-EEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcc
Confidence 999999999988887788889999888876544332 5678999999999995455677899999875421 0
Q ss_pred -----CCCeeEEe--eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCc
Q psy11132 150 -----RFPVNVSD--LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSY 222 (243)
Q Consensus 150 -----~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (243)
..+..... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|... .|..+.+..++.+.+.|..
T Consensus 165 ~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~---~p~~~~~~~G~~v~l~C~~ 241 (585)
T 2ocw_A 165 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP---EPELVYEDLRGSVTFHCAL 241 (585)
T ss_pred cCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccC---CCceeEEcCCCcEEEEEEc
Confidence 11111111 1112347999999999999999999999998888888888721 2334556778899999985
Q ss_pred ccc----cccceE-EeC
Q psy11132 223 YSF----EQDSWM-IDN 234 (243)
Q Consensus 223 ~~~----~~~~W~-~~~ 234 (243)
... +.+.|+ ++|
T Consensus 242 ~~~~~~~~~~~w~~~~g 258 (585)
T 2ocw_A 242 GPEVANVAKFLCRQSSG 258 (585)
T ss_pred CCCCCCceEEEEEeCCC
Confidence 322 367786 776
No 81
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.94 E-value=8.9e-26 Score=174.99 Aligned_cols=172 Identities=23% Similarity=0.359 Sum_probs=139.1
Q ss_pred CcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEE
Q psy11132 18 ERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQ 97 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 97 (243)
...+.+|+.+.|.|.+. +.|.+.+.|++++..+...... .......|.|.+++.+|+|.|+|.+.|..+.....+
T Consensus 231 ~~~~~~G~~v~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 305 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIAS-GVPTPDIAWYKKGGDLPSDKAK----FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTI 305 (404)
T ss_dssp EEEEETTSCEEEECCBC-CSSCCEEEEEETTBCCCTTTEE----EEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CceEecCCCEEEEEEEC-CCCCCcEEEEECCEECCCCccc----ccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEE
Confidence 35688999999999984 7788899999999888654431 112256899999999999999999999999888889
Q ss_pred EEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCee
Q psy11132 98 RLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGE 177 (243)
Q Consensus 98 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 177 (243)
.|.|..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.+.|+++|..+........... ....|.|.++..+|+|.
T Consensus 306 ~l~V~~~p~~~~~~~~-~~v~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~ 381 (404)
T 3p3y_A 306 SVRVKAAPYWLDEPKN-LILAPGEDGRLVCRA-NGNPKPTVQWMVNGEPLQSAPPNPNREV--AGDTIIFRDTQISSRAV 381 (404)
T ss_dssp EEEEEEEEEEEECCCC-EEECTTCCEEEECEE-EEESCCEEEEEETTEEGGGSCCCTTEEE--ETTEEEESSCCSSCCCE
T ss_pred EEEEeCCCeeeccCCc-ceeecCCcEEEEEEc-cccCCCceEEEECCEecCCCCCCceEEe--cCCEEEEeecCHHHCEE
Confidence 9999887766544332 557789999999999 5899999999999998875432111111 13579999999999999
Q ss_pred EEEEEEccCcceeeeEEEEEE
Q psy11132 178 YTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 178 y~C~~~n~~g~~~~~~~l~v~ 198 (243)
|+|.|.|..|....++.|.|.
T Consensus 382 Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 382 YQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEEEEE
Confidence 999999999999999888876
No 82
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.94 E-value=4.8e-27 Score=177.57 Aligned_cols=220 Identities=14% Similarity=0.180 Sum_probs=148.2
Q ss_pred CccCCCCCcccccCCeEEEEEEeeCCC---CCceeEEEECC--ee-------------e--cCCCceEEEEeeeeceEEE
Q psy11132 11 KLSPTNPERTLNVGERASLICSITKGD---IPLTIKWLKDG--RY-------------L--DNSAALSITHVDQYNSMLV 70 (243)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~l~C~~~~~~---~~~~v~W~~~~--~~-------------~--~~~~~~~~~~~~~~~~~l~ 70 (243)
.+...+....+.+|+++.|.|.+.... +.+.+.|++++ .. + ....++.+........+|.
T Consensus 16 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 95 (331)
T 3u83_A 16 QVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIR 95 (331)
T ss_dssp -----CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEE
T ss_pred ceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEE
Confidence 344446678899999999999985321 34589999954 11 1 1123333322222356799
Q ss_pred EeecCCCCCeeEEEE-EEeCCCcceeEEEEEEEcCCCccccc-cCCCCCCCC---CcEEEEEEeecCCCCCEEEEEeCCE
Q psy11132 71 IDSVSARHSGNYSCT-VRNMVAEDTQVQRLIVNVPPKIESFA-FPFDGLPEG---ARTRVICGVTHGDPPLTIRWLKDGK 145 (243)
Q Consensus 71 i~~~~~~d~G~Y~C~-~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~g---~~~~l~C~~~~~~p~~~~~W~~~~~ 145 (243)
|.+++.+|+|.|+|. +.+..+.....+.|.|..+|.+.... .....+..| +.+.|.|.+..+.|.+.+.|++++.
T Consensus 96 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~ 175 (331)
T 3u83_A 96 LSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLK 175 (331)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSC
T ss_pred EcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCC
Confidence 999999999999998 45556667778889998887764322 222345667 7899999844789999999999532
Q ss_pred ecCCCCCeeEEeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeee--------eeccc
Q psy11132 146 PLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYT--------LVFSQ 214 (243)
Q Consensus 146 ~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~--------~~~~~ 214 (243)
..... ....... ...+.|.|..+..+|+|.|+|.|.|..|.....+.|.|. .+|.+. +..+.
T Consensus 176 ~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~-----~~P~~~~~~~~~~~~~~g~ 248 (331)
T 3u83_A 176 GEAEY--QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQ-----YEPEVTIEGFDGNWYLQRM 248 (331)
T ss_dssp CEEEE--EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEE-----EEEEEEEECCCSCCBTTCC
T ss_pred Ccccc--ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEe-----cCCeEEEecCCCceEeCCC
Confidence 21100 0000001 113568888889999999999999999988888888876 333332 34467
Q ss_pred eeeeccCccccc--c-cceEEeCCee
Q psy11132 215 ASYMSTSYYSFE--Q-DSWMIDNENY 237 (243)
Q Consensus 215 ~~~~~~~~~~~~--~-~~W~~~~~~~ 237 (243)
.+.+.|.....| . +.|+++++.+
T Consensus 249 ~~~l~C~~~g~p~p~~i~W~~~~~~~ 274 (331)
T 3u83_A 249 DVKLTCKADANPPATEYHWTTLNGSL 274 (331)
T ss_dssp CEEEEEEEEEESCCCEEEEEETTBSC
T ss_pred eEEEEEeCcCCCCCCEEEEEECCCcc
Confidence 788899876654 5 9999998754
No 83
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=5.1e-26 Score=175.92 Aligned_cols=174 Identities=23% Similarity=0.370 Sum_probs=138.5
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee-eeceEEEEeecCCCCCeeEEEEEEeCCCcce
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD-QYNSMLVIDSVSARHSGNYSCTVRNMVAEDT 94 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 94 (243)
+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.......+.... .....|.|.+++.+|+|.|+|.+.|..+...
T Consensus 219 ~~~~~~~~G~~v~l~C~~~-g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYG-SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp CCSEEEETTSCEEEEEEEE-CSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCE
T ss_pred CCceEEECCCcEEEEEEec-cCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCce
Confidence 3456789999999999995 7888899999999988654332222111 1234899999999999999999999988754
Q ss_pred e-EEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCC
Q psy11132 95 Q-VQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAA 173 (243)
Q Consensus 95 ~-~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 173 (243)
. .+.|.|..+|.+...+.....+..|+.+.|.|.+ .|.|.+.+.|+++|..+... ..... ...|.|.++..+
T Consensus 298 ~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~-~~~~~-----~~~L~i~~~~~~ 370 (395)
T 1bih_A 298 KHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKV-TGLPAPNVVWSHNAKPLSGG-RATVT-----DSGLVIKGVKNG 370 (395)
T ss_dssp EEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEE-EEESCCCCEEEETTEECCSS-SEEEE-----TTEEEESSCCST
T ss_pred EEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEE-CcccCCeeEEEECCEECCCC-ceEEE-----CCEEEEeeCCcc
Confidence 4 8889998888766543322456889999999999 58899999999999998754 22221 248999999999
Q ss_pred CCeeEEEEEEccCcceeeeEEEEE
Q psy11132 174 HSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 174 d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
|+|.|+|.|.|..|....++.|.|
T Consensus 371 d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 371 DKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp TCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCEEEEEEEEccCCCceEEEEEEE
Confidence 999999999999999988888876
No 84
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=2.6e-25 Score=174.88 Aligned_cols=221 Identities=17% Similarity=0.204 Sum_probs=145.0
Q ss_pred eeEEEecCCCcc-CCCCCcccccCCeEEEEEEeeCCCCCc---eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCC
Q psy11132 2 LVIFSTVPPKLS-PTNPERTLNVGERASLICSITKGDIPL---TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 2 ~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+.|.+..+|.+. ..+....+.+|+.+.|.|.+. +.+++ .+.|+|++..+....... ......|.|.+++.+
T Consensus 78 ~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~-g~~~~~~~~v~W~k~g~~l~~~~~~~----~~~~~~L~i~~~~~~ 152 (450)
T 1z7z_I 78 TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVE-GGAPRANLTVVLLRGEKELKREPAVG----EPAEVTTTVLVRRDH 152 (450)
T ss_dssp CEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEE-CCBCGGGEEEEEEETTEEEEEEECCT----TTEEEEEEEECCSSC
T ss_pred EEEEEEeCCCcceecCCCceEeeCCeEEEEEEec-CCCCCcCcEEEEeeCCEEeecccccc----cccceEEEEEeeccc
Confidence 356777788766 455667899999999999996 65665 899999998876432211 112468999999999
Q ss_pred CCeeEEEEEEeCCCcce--------eEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCC-C--CCEEEEEeCCEe
Q psy11132 78 HSGNYSCTVRNMVAEDT--------QVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGD-P--PLTIRWLKDGKP 146 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~--------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-p--~~~~~W~~~~~~ 146 (243)
|+|.|+|.+.|..+... ....+.|...|...........+.+|+.+.|.|.+. |. | .+.+.|++++..
T Consensus 153 d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~-g~~P~~~~~~~W~~~~~~ 231 (450)
T 1z7z_I 153 HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLD-GLFPVSEAQVHLALGDQR 231 (450)
T ss_dssp SSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEE-SCTTGGGCEEEEEETTEE
T ss_pred cCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEee-CCCCCCceEEEEeCCCEe
Confidence 99999999999866432 334445543321111111114567899999999995 66 7 789999999998
Q ss_pred cCCCCCeeEEeeccceeEEEEeecCCCCCe--eEEEEEEccCcceeeeEEEEEEeecCCCCCee-----eeeccceeeec
Q psy11132 147 LSPRFPVNVSDLDSFSSLLSINSVSAAHSG--EYTCVASNTAAQARYSSKLQVKGNLNRLPPSY-----TLVFSQASYMS 219 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g--~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~-----~~~~~~~~~~~ 219 (243)
+... .. ...+.....+.+ ++..+|+| .|+|.|.|..|.....+.|.|...+ +|.+ .+..++.+.+.
T Consensus 232 ~~~~--~~-~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~---~p~i~~~~~~v~~G~~v~l~ 304 (450)
T 1z7z_I 232 LNPT--VT-YGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP---APNVILTKPEVSEGTEVTVK 304 (450)
T ss_dssp CCCE--EE-EETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCC---CCEEEESCSEEETTCEEEEE
T ss_pred CCce--EE-ecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCC---CCeEecCCeeEeCCCcEEEE
Confidence 8762 11 111111122222 67899999 9999999999988888888887322 3444 34567888899
Q ss_pred cCcccccccceEEeCCee
Q psy11132 220 TSYYSFEQDSWMIDNENY 237 (243)
Q Consensus 220 ~~~~~~~~~~W~~~~~~~ 237 (243)
|.....+.++| +|..+
T Consensus 305 C~~~p~p~i~W--~g~~~ 320 (450)
T 1z7z_I 305 CEAHPRAKVTL--NGVPA 320 (450)
T ss_dssp EEC---------------
T ss_pred EecCCCCEeEE--CCEEc
Confidence 98886679999 66554
No 85
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.94 E-value=2.4e-26 Score=161.40 Aligned_cols=185 Identities=17% Similarity=0.176 Sum_probs=123.6
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
+.+|.+...+. ..+.+|++++|.|.+. +.+. .+.|+|++..+....... ........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~-~~~W~k~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGG-QETQ-EYRLYREKKTAPWITRIP--QELVKKGQFPIPSITWEHTGRYRCYY 77 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECC-TTCC-CEEEEESSSCCHHHHTSC--HHHHTTTEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEec-CCCc-EEEEEECCcccccccccc--ccCCcccEEEECCCCHHHCeEEEEEE
Confidence 35677776665 4789999999999985 5554 799999998764211100 01112578999999999999999999
Q ss_pred EeCC-C--cceeEEEEEEEcCC-CccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe-eEEeeccc
Q psy11132 87 RNMV-A--EDTQVQRLIVNVPP-KIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV-NVSDLDSF 161 (243)
Q Consensus 87 ~~~~-~--~~~~~~~l~v~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~ 161 (243)
.|.. + ..+..+.|.|...+ .......+...+.+|+.+.|.|.+ .+. .+.+.|++++..+...... ........
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~-~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 155 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDS-QVA-FDGFILCKEGEDEHPQCLNSQPHARGSS 155 (198)
T ss_dssp EETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEC-SSC-CSEEEEEEC------CEEEC------CC
T ss_pred ECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEec-CCC-CcEEEEEECCCccCCccccccccCCCcc
Confidence 9976 4 34667788887732 222222222457789999999999 466 7899999999876533211 11111223
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccCcce-----eeeEEEEEE
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTAAQA-----RYSSKLQVK 198 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~-----~~~~~l~v~ 198 (243)
...|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 156 ~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 156 RAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred eeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 5789999999999999999999987532 344556554
No 86
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.94 E-value=9.8e-26 Score=158.59 Aligned_cols=176 Identities=22% Similarity=0.257 Sum_probs=125.1
Q ss_pred ccccCCeEEEEEEeeCCCCCceeEEEECC-eeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEE
Q psy11132 20 TLNVGERASLICSITKGDIPLTIKWLKDG-RYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQR 98 (243)
Q Consensus 20 ~~~~g~~~~l~C~~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 98 (243)
.+.+|+.+.|.|.+. |.|.+.+.|+++. ..+. ... . .......|.|.+++.+|+|.|+|.+.|..+..+..+.
T Consensus 12 ~~~~G~~v~L~C~~~-g~P~p~i~W~~~~~~~~~--~~~--~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 85 (202)
T 1vca_A 12 LAQIGDSVSLTCSTT-GCESPFFSWRTQIDSPLN--GKV--T-NEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQ 85 (202)
T ss_dssp EEETTSCEEEEEEEE-SCSSCEEEEEETTCCCCS--SEE--E-EETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred EEcCCCcEEEEEeec-CCCCCeEEEECCCCCCcc--ceE--E-EcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEE
Confidence 345999999999995 7788899999843 2221 111 1 1112457999999999999999999998887778889
Q ss_pred EEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC--CEEEEEeCCEecCCCCCeeE---EeeccceeEEEEeecCCC
Q psy11132 99 LIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKPLSPRFPVNV---SDLDSFSSLLSINSVSAA 173 (243)
Q Consensus 99 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~ 173 (243)
|.|..+|........ ..+.+|+.++|.|.+.++.|. +.+.|++++..+........ .........|.|.....+
T Consensus 86 l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d 164 (202)
T 1vca_A 86 VEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIED 164 (202)
T ss_dssp EEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGG
T ss_pred EEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeecc
Confidence 999887765544444 567899999999999644454 48999999987643210000 000112345678887888
Q ss_pred CCeeEEEEEEccCcc-------eeeeEEEEEEeecCCCCCe
Q psy11132 174 HSGEYTCVASNTAAQ-------ARYSSKLQVKGNLNRLPPS 207 (243)
Q Consensus 174 d~g~y~C~~~n~~g~-------~~~~~~l~v~~~~~~~~p~ 207 (243)
|.|.|+|.|.|..+. .+.++.|.|. .||.
T Consensus 165 ~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~-----y~P~ 200 (202)
T 1vca_A 165 IGKVLVCRAKLHIDEMDSVPTVRQAVKELQVY-----ISPK 200 (202)
T ss_dssp TTCEEEEEEEECSCCCTTSCSEEEEEEECCEE-----CCC-
T ss_pred CCCeEEEEEEccccCCCCcceeEeeEEEEEEe-----cCCC
Confidence 899999999998875 3456777787 7775
No 87
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.94 E-value=2.3e-26 Score=161.20 Aligned_cols=174 Identities=15% Similarity=0.172 Sum_probs=113.3
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..+|.+...+. ..+.+|++++|.|.+. +.+. .+.|+|++..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~-~~~W~k~g~~~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 2d3v_A 3 LSKATLWAEPG-SVISRGNSVTIRCQGT-LEAQ-EYRLVKEGSPEPWDTQN--PLEPKNKARFSIPSMTEHHAGRYRCYY 77 (196)
T ss_dssp CCBCEEEEESC-SEEETTCCEEEEEECC-TTCC-EEEEEETTCSSCSEEEC--CCSSTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCC-CcccCCCeEEEEEeCC-CCCc-EEEEEECCCCCCccccc--ccCCccccEEEeccCChhHCeEEEEEE
Confidence 45677776665 4788999999999985 5555 99999999866432110 001122578999999999999999999
Q ss_pred EeCCCc--ceeEEEEEEEcCCC-ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCee-EEeeccce
Q psy11132 87 RNMVAE--DTQVQRLIVNVPPK-IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVN-VSDLDSFS 162 (243)
Q Consensus 87 ~~~~~~--~~~~~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~ 162 (243)
.+..+. .+..+.|.|...+. ......+...+.+|+.++|.|.+ .+.| +.+.|++++..+....... ........
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~-~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 2d3v_A 78 YSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGS-RLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQ 155 (196)
T ss_dssp EETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEE-SSCC-SEEEEEEC---CCEEEEECEECTTSCEE
T ss_pred eCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEc-CCCC-CEEEEEccCCcccccccccccccCCCce
Confidence 987653 34567788876321 11111222467899999999999 5777 8999999998765321110 11111234
Q ss_pred eEEEEeecCCCCCeeEEEEEEccCc
Q psy11132 163 SLLSINSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 163 ~~l~i~~~~~~d~g~y~C~~~n~~g 187 (243)
..|.|.+++.+|+|.|+|.|.|..+
T Consensus 156 ~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 156 ALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEECCCCBTTBCEEEEEEEEETTE
T ss_pred eEEEeeecCcccCeeEEEEEEccCC
Confidence 7899999999999999999999765
No 88
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.94 E-value=5.7e-26 Score=155.61 Aligned_cols=163 Identities=17% Similarity=0.284 Sum_probs=123.4
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCC-CceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDI-PLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
|.+...+....+.+|+.+.|.|.+. +.+ .+.+.|++++..+.... ..+.+.+++.+|+|.|+|.+.+
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~-~~p~~~~~~W~~~g~~~~~~~-----------~~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGA-RSPESDSIQWFHNGNLIPTHT-----------QPSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESC-CCSSSSCEEEEETTEECTTCC-----------SSEEEEECCGGGCEEEEEEETT
T ss_pred CEEEeCCCCeEEECCCcEEEEEEec-CCCCcceEEEEECCeEcccCc-----------cceEEEecccccCeEEEEEEeC
Confidence 4455556667799999999999996 444 67999999999887542 2356778999999999999986
Q ss_pred CCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEe
Q psy11132 89 MVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSIN 168 (243)
Q Consensus 89 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 168 (243)
.. .+..+.|.|..++.... .+...+.+|+.+.|.|.+..+.|.+.+.|++++..+... .....|.|.
T Consensus 73 ~~--~s~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~---------~~~~~L~i~ 139 (170)
T 3ry4_A 73 TS--LSDPVHLTVLFEWLVLQ--TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS---------HLDPTFSIP 139 (170)
T ss_dssp SB--CCCCEEEEEECCSEEEE--CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE---------SSCCEEEES
T ss_pred CC--ceEeEEEEEECCceEec--CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc---------CCCCeEEEE
Confidence 43 34456777776553332 222456789999999999656677999999999875421 124679999
Q ss_pred ecCCCCCeeEEEEEEccCcc-eeeeEEEEE
Q psy11132 169 SVSAAHSGEYTCVASNTAAQ-ARYSSKLQV 197 (243)
Q Consensus 169 ~~~~~d~g~y~C~~~n~~g~-~~~~~~l~v 197 (243)
++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 140 ~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 140 QANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 99999999999999999986 345566655
No 89
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.94 E-value=3.6e-27 Score=176.61 Aligned_cols=189 Identities=15% Similarity=0.196 Sum_probs=138.1
Q ss_pred eEEEecCCCcc--CCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCe
Q psy11132 3 VIFSTVPPKLS--PTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSG 80 (243)
Q Consensus 3 ~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 80 (243)
.+.+..+|.+. ..+.......|+.+.|.|.+..+.|.+.+.|++++..+...............+.|.|..+...|.|
T Consensus 106 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g 185 (308)
T 4fom_A 106 TVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGR 185 (308)
T ss_dssp EEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTC
T ss_pred EEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCc
Confidence 34455555433 3345566778999999998766888899999999987654221111111112457999999999999
Q ss_pred eEEEEEEeCCCcc--eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCeeEEe
Q psy11132 81 NYSCTVRNMVAED--TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 81 ~Y~C~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~ 157 (243)
.|+|.+.|..+.. ...+.|.|..+|.+.........+..|+.+.|.|.+ .|.|++ .+.|++++..+.....
T Consensus 186 ~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~-~g~P~p~~v~W~k~~~~~~~~~~----- 259 (308)
T 4fom_A 186 RITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNA-DANPPPFKSVWSRLDGQWPDGLL----- 259 (308)
T ss_dssp EEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCE-EEESCEEEEECCBSSSCCCSSCB-----
T ss_pred cEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEE-ecCCCCcEEEEEECCeECCCcEE-----
Confidence 9999999987654 445566666667665544443456678999999999 588877 7999999887764321
Q ss_pred eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 158 LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
......|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 260 -~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 260 -ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp -CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEE
T ss_pred -EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 1123567788999999999999999999999999999998
No 90
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.94 E-value=6.8e-26 Score=168.08 Aligned_cols=213 Identities=17% Similarity=0.215 Sum_probs=150.3
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.+|.+...+....+.+|+.+.|.|.+. + .+.|++++.... . .........|.|.+++.+|+|.|+|.+.
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~-~----~v~W~~~~~~~~-----~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 71 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSN-G----SVEWDGPISPYW-----T-LDPESPGSTLTTRNATFKNTGTYRCTEL 71 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECS-S----CCEEECSCSSSS-----E-ECCCSSCCEEEESSCCGGGCEEEEEECC
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeC-C----cEEEccCCCceE-----E-EeccCCccEEEEeeeccccCEEEEEEEe
Confidence 456777777788899999999999984 4 499997764321 1 1112235789999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEe-CCEecCCCCCeeEEeeccceeEE
Q psy11132 88 NMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLK-DGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~-~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
+..+..+..+.|.|..+|...........+.+|+.+.|.|.+. +.+.+ .+.|++ ++..+.......... ...|
T Consensus 72 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~----~~~L 146 (289)
T 3ejj_X 72 EDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT-DPALKDSVSLMREGGRQVLRKTVYFFSP----WRGF 146 (289)
T ss_dssp C-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEES-CGGGGGSEEEEEGGGEECCTTCCEEEET----TTEE
T ss_pred ccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEcc-CCCcceEEEEEecCCeecCCCccEEECC----CCCE
Confidence 8888788888999988776533333335677899999999994 65554 499986 666665544333321 3469
Q ss_pred EEeecCCCCCeeEEEEEE-ccCcceeeeEEEEEEeecCCCCCeeee-------eccceeeeccCccc-c--cccceEEeC
Q psy11132 166 SINSVSAAHSGEYTCVAS-NTAAQARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYS-F--EQDSWMIDN 234 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~-n~~g~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~-~--~~~~W~~~~ 234 (243)
.|.++..+|+|.|+|.|. +..+.....+.|.|..... .+|.+.. ..+..+.+.|.... . +.+.|+++|
T Consensus 147 ~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~-~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~ 225 (289)
T 3ejj_X 147 IIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHP-EPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGD 225 (289)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCC-CCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETT
T ss_pred EEeecccccCEEEEEEEEeCCCccccccEEEEEEECCC-CCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECC
Confidence 999999999999999999 5556666778888874322 4555544 34667778887755 2 489999998
Q ss_pred Cee
Q psy11132 235 ENY 237 (243)
Q Consensus 235 ~~~ 237 (243)
..+
T Consensus 226 ~~~ 228 (289)
T 3ejj_X 226 TKL 228 (289)
T ss_dssp EEC
T ss_pred EEe
Confidence 654
No 91
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.94 E-value=7.7e-26 Score=174.54 Aligned_cols=162 Identities=27% Similarity=0.411 Sum_probs=132.5
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec------CCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCC
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD------NSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMV 90 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 90 (243)
....+.+|+.+.|.|.+. +.|.+.+.|++++..+. ...+.. .....|.|.+++.+|+|.|+|.+.|..
T Consensus 220 ~~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 293 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQ-GFPAPSFRWYKFIEGTTRKQAVVLNDRVK-----QVSGTLIIKDAVVEDSGKYLCVVNNSV 293 (388)
T ss_dssp CCEEEETTSCEEECCCCE-EESCCEEEEEEECTTSSCEEECCCSSSEE-----EETTEEEESSCCGGGCEEEEEEEECSS
T ss_pred CceEEeeCCcEEEEEECC-CCCCCEEEEEecCCCCcccccccccCcee-----cccCEEEECcCCHHHCeEEEEEEecCC
Confidence 345688899999999985 77888999999754321 122222 125689999999999999999999999
Q ss_pred CcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeec
Q psy11132 91 AEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV 170 (243)
Q Consensus 91 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 170 (243)
+..+..+.|.|..+|.+...+. ...+..|+.+.|.|.+ .|.|.+.+.|+++|..+... .+.|.|.++
T Consensus 294 g~~~~~~~l~V~~~p~~~~~~~-~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~i~~~-----------~~~L~i~~v 360 (388)
T 2v5m_A 294 GGESVETVLTVTAPLSAKIDPP-TQTVDFGRPAVFTCQY-TGNPIKTVSWMKDGKAIGHS-----------ESVLRIESV 360 (388)
T ss_dssp CEEEEEEEEEEEEEEEEEEESS-EEEECTTSCEEEEEEE-EEECCCEEEEEETTEECSCC-----------SSEEEESSC
T ss_pred CceeEEEEEEEeCCCccccCCC-cEEecCCCCEEEEEEe-ccccCCeEEEEECCEECccC-----------CCEEEEecC
Confidence 9888888899988776554332 2567889999999999 68899999999999988643 367999999
Q ss_pred CCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 171 SAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
..+|+|.|+|.|.|..|....++.|.|
T Consensus 361 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 361 KKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 999999999999999999988888875
No 92
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.94 E-value=2.3e-25 Score=157.51 Aligned_cols=172 Identities=18% Similarity=0.230 Sum_probs=127.6
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC-------------------CceEEEEeeeeceEEEEeecCCC
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS-------------------AALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
....+.+|+++.|.|.. .+.+.+.+.|++++...... .+..+. .+.+|.|.+++.+
T Consensus 7 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~----~~~~L~i~~v~~~ 81 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHN-LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY----SNGSLLFQMITMK 81 (208)
T ss_dssp ESSEEETTCCEEEEEEC-CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC----TTSCEEECSCCGG
T ss_pred ccceeecCCcEEEEEeC-CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe----cCCeEEEcccccc
Confidence 34568899999999996 46777799999875432211 111111 1357999999999
Q ss_pred CCeeEEEEEEeCC-CcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 78 HSGNYSCTVRNMV-AEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 78 d~G~Y~C~~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
|+|.|+|.+.+.. +.....+.|.|..++..+........+..|+.+.|.|.+ .+.| +.+.|++++..+.........
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~-~~~p-p~i~W~~~g~~l~~~~~~~~~ 159 (208)
T 3r4d_A 82 DMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLS-NDIG-ANIQWLFNSQSLQLTERMTLS 159 (208)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEEC-SCTT-CEEEEEETTEECCCCSSEEEE
T ss_pred CCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEEC-CCCC-CceEEEECCEeCCCCCCeEEc
Confidence 9999999999875 456677788887765433332222337889999999999 5655 799999999998866544333
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEE
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 198 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~ 198 (243)
. ....|.|.++..+|+|.|+|.|.|..|... ..++|.|.
T Consensus 160 ~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 160 Q---NNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp T---TTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred C---CCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 2 236799999999999999999999999865 45777776
No 93
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=8.4e-25 Score=151.67 Aligned_cols=165 Identities=23% Similarity=0.408 Sum_probs=124.2
Q ss_pred cccccCCeEEEEEEeeCCCCCc--eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeE
Q psy11132 19 RTLNVGERASLICSITKGDIPL--TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQV 96 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 96 (243)
..+.+|+.++|.|.+. +.+.+ .+.|++++..+....... ....|.|. +.+|+|.|+|.+.+ .....
T Consensus 8 ~~v~~G~~v~l~C~~~-~~~~p~~~~~W~k~~~~l~~~~~~~------~~~~l~i~--~~~d~G~Y~C~~~n---~~~~~ 75 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLN-DSATEVTGHRWLKGGVVLKEDALPG------QKTEFKVD--SDDQWGEYSCVFLP---EPMGT 75 (184)
T ss_dssp EEEEETTEEEEEEEEE-SCSSCCCEEEEESSSEEEECTTCCC------SEEEEEEC--GGGCCEEEEEEEES---TTSCE
T ss_pred EEEecCCCEEEEEECC-CCCCCceEEEEEeCCEEeecccccC------CcEEEEEe--chhhCeEEEEEEEC---CcCcE
Confidence 4578999999999986 44544 899999998887654221 13445555 68999999999997 33466
Q ss_pred EEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEe---CC-EecCCC--CCeeEEeeccceeEEEEee
Q psy11132 97 QRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLK---DG-KPLSPR--FPVNVSDLDSFSSLLSINS 169 (243)
Q Consensus 97 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~---~~-~~~~~~--~~~~~~~~~~~~~~l~i~~ 169 (243)
+.|.|..+|.+...+.. ..+..|+.+.|.|.+ .+.| .+.+.|++ ++ ..+... ..+... .....+.|.|.+
T Consensus 76 ~~l~V~~~P~~~~~~~~-~~~~~g~~~~l~C~~-~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~ 152 (184)
T 3b5h_A 76 ANIQLHGPPRVKAVKSS-EHINEGETAMLVCKS-ESVPPVTDWAWYKITDSEDKALMNGSESRFFVS-SSQGRSELHIEN 152 (184)
T ss_dssp EEEEECCSCCCEESCSE-EEECTTSCEEEEEEC-CCSSCCCEEEEEECCSSSCEECCTTGGGTEEEE-EETTEEEEEECS
T ss_pred EEEEEecCCceeecCCC-cEEcCCCcEEEEEEE-CCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEE-ecCCeeEEEEee
Confidence 78888888877654422 457789999999999 5888 79999999 44 444322 222222 233457899999
Q ss_pred cC-CCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 170 VS-AAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 170 ~~-~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+. .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 153 v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 153 LNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 99 899999999999999998888888876
No 94
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.94 E-value=3.6e-25 Score=166.22 Aligned_cols=175 Identities=23% Similarity=0.367 Sum_probs=130.9
Q ss_pred cccccCCeEEEEEEee-----CCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE-eCCCc
Q psy11132 19 RTLNVGERASLICSIT-----KGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR-NMVAE 92 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~-----~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~ 92 (243)
..+.+|+.+.|.|.+. .+.|.+.+.|++++..+....... . .....|.|.+++.+|+|.|+|.+. +..+.
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~-~---~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF-S---GVKDRLIVMNVAEKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSE-E---EETTEEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceE-e---ecCceEEEEeceehhCcEEEEEEEcCCCCc
Confidence 4678899999999972 478888999999999886533211 1 125689999999999999999999 67776
Q ss_pred c---eeEEEEEEE-----cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee----c-
Q psy11132 93 D---TQVQRLIVN-----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL----D- 159 (243)
Q Consensus 93 ~---~~~~~l~v~-----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~----~- 159 (243)
. ...+.+.+. .+|.+.........+..|+.+.|.|.+ .|.|.+.+.|+++|..+........... .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~-~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~ 267 (315)
T 1itb_B 189 QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV-TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP 267 (315)
T ss_dssp EEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEE-EECTTSEEEEEETTEECCTTCSSEEEEEEEECCS
T ss_pred EEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEE-ecCCCCeeEEEECCEECCcccccccccceeeecc
Confidence 4 344445444 233333222111357899999999999 5899999999999999886543221110 0
Q ss_pred ------cceeEEEEeecCCCC-CeeEEEEEEccCcceeeeEEEEEE
Q psy11132 160 ------SFSSLLSINSVSAAH-SGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 160 ------~~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
...+.|.|.++..+| +|.|+|.|.|..|....++.|.|.
T Consensus 268 ~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 268 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp SCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 124589999999999 999999999999999988888775
No 95
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.94 E-value=1.7e-26 Score=176.85 Aligned_cols=196 Identities=13% Similarity=0.132 Sum_probs=142.2
Q ss_pred cccccCCeEEEEEEeeCCCCCceeEEEECCeeecC--------------CCceEEEEe--eeeceEEEEeecCCCCCeeE
Q psy11132 19 RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN--------------SAALSITHV--DQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~--------------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y 82 (243)
+.+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++.+... ......|.|.+++.+|+|.|
T Consensus 4 v~~~~G~~v~L~C~~~-~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 4 VLGKKGDTVELTCTAS-QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEETTSCEEECCCCT-TCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred EEEeCCCeEEEEEEec-CCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 5688999999999985 788889999999854211 111111100 11256799999999999999
Q ss_pred EEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccce
Q psy11132 83 SCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 162 (243)
Q Consensus 83 ~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 162 (243)
+|.+.+.. ..+.|.|... .. .+...+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ...
T Consensus 83 ~C~~~n~~----~~~~l~V~~~---~~--~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~-----------~~~ 141 (363)
T 1wio_A 83 ICEVEDQK----EEVQLLVFGL---TA--NSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKNI-----------QGG 141 (363)
T ss_dssp EEEETTEE----EEEEEEEEEE---EE--SSCSSEESBSCEEEEEEC-CTTCCCCEEEECSSSCEE-----------EES
T ss_pred EEEEEECC----CcEEEEEEeC---CC--CCceEEecCCCEEEEEEc-CCCCCCeEEEEcCCCccc-----------ccc
Confidence 99998763 2455666541 11 111456789999999999 578999999999875431 124
Q ss_pred eEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCccc-------ccccceEEeCC
Q psy11132 163 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYS-------FEQDSWMIDNE 235 (243)
Q Consensus 163 ~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~W~~~~~ 235 (243)
..|.|.++..+|+|.|+|.|.|..+.....+.+.|...+. .+....+..++.+.+.|.... .+.+.|+++|.
T Consensus 142 ~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~ 220 (363)
T 1wio_A 142 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK-ASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERA 220 (363)
T ss_dssp SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC-SEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSC
T ss_pred eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC-CCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCC
Confidence 6799999999999999999999877777777777773222 223455667889999996644 45899999986
Q ss_pred ee
Q psy11132 236 NY 237 (243)
Q Consensus 236 ~~ 237 (243)
.+
T Consensus 221 ~~ 222 (363)
T 1wio_A 221 SS 222 (363)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 96
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.94 E-value=5.4e-26 Score=175.07 Aligned_cols=175 Identities=26% Similarity=0.436 Sum_probs=142.5
Q ss_pred CCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 9 PPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 9 ~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
+|.+... +....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ......|.|.+++.+|+|.|+|.+.
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~ 277 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAF-GNPVPQIKWRKLDGSQTSKW-------LSSEPLLHIQNVDFEDEGTYECEAE 277 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEE-EESCCEEEEEECCSCCSCCC-------SBSSSEEEECSCCGGGCEEEEEEEE
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEc-cCCCCEEEEEECCcccccEE-------ecCCcEEEEccCChhhCEEEEEEEE
Confidence 4544433 4567789999999999995 77888999999887654311 1225789999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEE
Q psy11132 88 NMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSI 167 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i 167 (243)
|..+.....+.|.|..+|.+...... ..+..|+.+.|.|.+ .|.|.+.+.|+++|..+......... .+.|.|
T Consensus 278 n~~g~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~-----~~~L~i 350 (382)
T 1cs6_A 278 NIKGRDTYQGRIIIHAQPDWLDVITD-TEADIGSDLRWSCVA-SGKPRPAVRWLRDGQPLASQNRIEVS-----GGELRF 350 (382)
T ss_dssp ETTEEEEEEEEEEEEEEEEEEECCCC-EEEETTCCEEEECEE-EEESCCEEEEEETTEECCCCSSEEEE-----TTEEEE
T ss_pred cCCCeEEEEEEEEEecCCCcccCCCc-cEEcCCCeEEEEEEe-eeecCCEEEEEECCEECCCCceEEEE-----CCEEEE
Confidence 99988888888999887766543332 456789999999999 68999999999999998876544332 357999
Q ss_pred eecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 168 NSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 168 ~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 351 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 351 SKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999999999999999999999999988876
No 97
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.94 E-value=4e-26 Score=171.33 Aligned_cols=215 Identities=17% Similarity=0.193 Sum_probs=144.5
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCc-----eeEEEECCeee-------------cCCCceEEEEe----eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPL-----TIKWLKDGRYL-------------DNSAALSITHV----DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~-----~v~W~~~~~~~-------------~~~~~~~~~~~----~~~~~~l~i~~ 73 (243)
|..+.+..|++++|.|.+. +.+.+ .+.|+|++... ....+..+... ...+.+|.|.+
T Consensus 7 P~~v~~~~G~~v~L~C~v~-~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (313)
T 4fqp_A 7 PTQVPGFLGDSVTLPCYLQ-VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (313)
T ss_dssp CSEECCBTTSCEEECCEEE-CCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECS
T ss_pred CCEEEEecCCCEEEEEEEE-CCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECc
Confidence 4456688899999999996 43332 48999987532 11222222111 11246799999
Q ss_pred cCCCCCeeEEEEEEe-CCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC
Q psy11132 74 VSARHSGNYSCTVRN-MVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 152 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~-~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~ 152 (243)
++.+|+|.|+|.+.+ ..+..+..+.|.+..+|........ ..+..|+...+.|.+..+.|.+.+.|++++..+.....
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~-~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~ 164 (313)
T 4fqp_A 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQK-VQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQ 164 (313)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECC-BCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEE
T ss_pred CChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccc-eEeecCceEEEEEEccCccCCcEEEeecCCccccccce
Confidence 999999999998864 3445666777777777765544333 45667888899998877889999999999876643221
Q ss_pred eeEEeecc--ceeEEEEeecCCCCCeeEEEEEEccCcceeee--EEEEEEeecCCCCCeee--------eeccceeeecc
Q psy11132 153 VNVSDLDS--FSSLLSINSVSAAHSGEYTCVASNTAAQARYS--SKLQVKGNLNRLPPSYT--------LVFSQASYMST 220 (243)
Q Consensus 153 ~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~--~~l~v~~~~~~~~p~~~--------~~~~~~~~~~~ 220 (243)
........ ..+.|.|.....+|+|.|+|.|.|..+..... +.|.|. .||.+. ...++.+.+.|
T Consensus 165 ~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-----~~P~v~~~~~~~~~~~~g~~v~l~C 239 (313)
T 4fqp_A 165 VPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY-----YPPEVSISGYDNNWYLGQNEATLTC 239 (313)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC-----EEEEEEEECCCSCEETTCCCEEEEE
T ss_pred eeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc-----cCCccccccccceeecCCCeEEEEE
Confidence 11111111 13568888888999999999999987655443 444444 344432 33456678899
Q ss_pred Cccccc---ccceEEeCCee
Q psy11132 221 SYYSFE---QDSWMIDNENY 237 (243)
Q Consensus 221 ~~~~~~---~~~W~~~~~~~ 237 (243)
...+.| .++|+++|+.+
T Consensus 240 ~~~g~P~p~~v~W~~~~~~l 259 (313)
T 4fqp_A 240 DARSNPEPTGYNWSTTMGPL 259 (313)
T ss_dssp EEEEESCCCEEEEEETTBSC
T ss_pred EecCCCCCcEEEEEECCEEC
Confidence 877654 58999998754
No 98
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.94 E-value=6.1e-26 Score=161.09 Aligned_cols=176 Identities=15% Similarity=0.141 Sum_probs=122.2
Q ss_pred CCCcccccC--CeEEEEEEeeCCCCCceeEEEEC---CeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCC
Q psy11132 16 NPERTLNVG--ERASLICSITKGDIPLTIKWLKD---GRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMV 90 (243)
Q Consensus 16 ~~~~~~~~g--~~~~l~C~~~~~~~~~~v~W~~~---~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 90 (243)
+..+.+.+| +++.|.|.+. + |.+.+.|+++ +..+....+.... ....|.|.+++.+|+|.|+|.+.+..
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~-~-p~~~v~w~~~~~~g~~~~~~~~~~~~----~~~~l~I~~v~~~D~G~Y~C~a~n~~ 87 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGS-I-SNLNVSLCARYPEKRFVPDGNRISWD----SKKGFTIPSYMISYAGMVFCEAKIND 87 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBS-S-TTCCEEEEEETTTEEECCCSSSCEEE----TTTEEEEEGGGTTTCSEEEEEEC---
T ss_pred ceEEEEecCCCccEEEeeccC-C-CCcEEEEEhhcCCCccccCCCccccc----CCccEEEccCChhcCceEEEEEEECC
Confidence 356788999 9999999984 4 6679999884 5555544333221 14579999999999999999998754
Q ss_pred Cc-ceeEEEEEEEcC--CCccccccCCCCCCCCCcEEEEEEeecCCC--CCEEEEEeCCEecCCCCC-eeEEe--e----
Q psy11132 91 AE-DTQVQRLIVNVP--PKIESFAFPFDGLPEGARTRVICGVTHGDP--PLTIRWLKDGKPLSPRFP-VNVSD--L---- 158 (243)
Q Consensus 91 ~~-~~~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~~~~~~~~~-~~~~~--~---- 158 (243)
+. .+..+.|.|... |.+...+.....+.+|+++.|.|.+. |.| ++.+.|++++..+..... ..... .
T Consensus 88 ~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~ 166 (213)
T 2x1w_L 88 ESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTAR-TELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEM 166 (213)
T ss_dssp -CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEE-ECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSC
T ss_pred eeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEE-CCCCCceEEEEEecCCccceEEEeccccccccCccc
Confidence 43 233366666442 22222222222578999999999995 543 468999998886543211 00000 0
Q ss_pred ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 159 DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 159 ~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
....+.|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 167 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 167 KKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp EEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEe
Confidence 1224679999999999999999999999999999999998
No 99
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.94 E-value=4.1e-25 Score=153.29 Aligned_cols=159 Identities=19% Similarity=0.255 Sum_probs=119.3
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
+..+|.+...+.. .+.+|++++|.|.+. + +.+.+.|+|++... ......|.|.+++.+|+|.|+|.
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~-~-~~~~~~W~k~g~~~-----------~~~~~~L~i~~v~~~D~G~Y~C~ 70 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGP-P-GVDLYRLEKLSSSR-----------YQDQAVLFIPAMKRSLAGRYRCS 70 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECS-T-TCSEEEEEETTTCC-----------EESSSEEEESSCCGGGCEEEEEE
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCC-C-CCCEEEEEECCccc-----------cCcccEEEECcCChhhCceEEEE
Confidence 3467777766654 789999999999984 5 66799999998651 11257899999999999999999
Q ss_pred EEeCCCc--ceeEEEEEEEcC---CCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 86 VRNMVAE--DTQVQRLIVNVP---PKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 86 ~~~~~~~--~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
+.+..+. .+..+.|.|... |.+... +...+.+|+.+.|.|.+ .+. ++.+.|++++..+...... ..
T Consensus 71 a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~--p~~~v~~G~~v~l~C~~-~~~-~~~~~w~k~g~~~~~~~~~-----~~ 141 (184)
T 2gi7_A 71 YQNGSLWSLPSDQLELVATGVFAKPSLSAQ--PGPAVSSGGDVTLQCQT-RYG-FDQFALYKEGDPAPYKNPE-----RW 141 (184)
T ss_dssp EEETTEEBCCCCCEEEEEESSSCCCEEEEE--CCCSSCCTTCEEEEEEC-SSC-CCEEEEEECCCCTTSCCCC-----EE
T ss_pred EEcCCCccCCCCCEEEEecCcCCCCEEEeC--CCceecCCCcEEEEEEc-CCC-CcEEEEEECCCcCcceecC-----CC
Confidence 9997652 345677777543 222222 23567899999999997 454 4699999999877653211 11
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCc
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g 187 (243)
....|.|.+++.+|+|.|+|.|.|..+
T Consensus 142 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 142 YRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred ceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 246688999999999999999999764
No 100
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=9.1e-26 Score=176.80 Aligned_cols=225 Identities=16% Similarity=0.206 Sum_probs=146.4
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEEe--e----eeceEEEEeecCCCCCee
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITHV--D----QYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~--~----~~~~~l~i~~~~~~d~G~ 81 (243)
+|.+...+......+|+.+.|.|.+.++.|.+ .+.|+++|..+........... . ...+.|.|.+++.+|+|.
T Consensus 116 ~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 195 (438)
T 1qgc_4 116 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 195 (438)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCe
Confidence 66666544444456788999999997546766 9999999998865411111000 0 113579999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcC-CCccccccCCCCCCCCCcEEEEEEeecCCC--CCEEEEEeC--CEecC--------
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVP-PKIESFAFPFDGLPEGARTRVICGVTHGDP--PLTIRWLKD--GKPLS-------- 148 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~--~~~~~-------- 148 (243)
|+|.+.|..+..... +.+... +.+.........+.+|+.+.|.|.+ .|.| .+.+.|+++ +..+.
T Consensus 196 Y~C~a~n~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~ 272 (438)
T 1qgc_4 196 YTCEATHKTSTSPIV--KSFNRNECEVMLVESGGGLVKPGGSLKLSCTA-SGFIFNRCAMSWVRQTPEKRLEWVATISSG 272 (438)
T ss_dssp EEEEEEETTCSSCEE--EEEETTC-CCEEEEECCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEEETTTEEEEEEEECTT
T ss_pred EEEEEEecccCCcee--cccccccceeEEecCCceEEecCCcEEEEEEE-cccccCCcEEEEEECCCCCCcEEEEEEeec
Confidence 999999987764333 333321 1121122223457899999999999 5777 679999986 43221
Q ss_pred ---------CCCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEccCc-----ceeeeEEEEEEeecCCCCCeee----
Q psy11132 149 ---------PRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTAA-----QARYSSKLQVKGNLNRLPPSYT---- 209 (243)
Q Consensus 149 ---------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g-----~~~~~~~l~v~~~~~~~~p~~~---- 209 (243)
...+...... ......|.|.+++.+|+|.|+|.|.|..+ .......+.|..... .+|.+.
T Consensus 273 ~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~-~~P~v~~~~~ 351 (438)
T 1qgc_4 273 GTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKT-TPPSVYPLAP 351 (438)
T ss_dssp SCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCC-BCCEEEEECC
T ss_pred CCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCC-CCCeEEEcCc
Confidence 0112222221 22356899999999999999999999544 222345666653221 234332
Q ss_pred ---eeccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 210 ---LVFSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 210 ---~~~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
+..++.+.+.|....+ | .+.|+++|..+
T Consensus 352 ~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~ 386 (438)
T 1qgc_4 352 GSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSS 386 (438)
T ss_dssp CGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCS
T ss_pred ccccccCCcEEEEEEeccccCCCcEEEEecCCCCC
Confidence 2347788999988654 3 89999998764
No 101
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=6.4e-26 Score=178.32 Aligned_cols=205 Identities=17% Similarity=0.158 Sum_probs=150.0
Q ss_pred cCCCCCcccccCCeEEEEEEeeCCCCCcee-----EEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 13 SPTNPERTLNVGERASLICSITKGDIPLTI-----KWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v-----~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
...+....+.+|+++.|.|.+. + |.+.+ .|+|++..+... + ...|.|.+++. |.| |+|.+.
T Consensus 3 ~~~P~~~~v~~G~~v~L~C~~~-g-p~p~~~~~~~~w~k~~~~~~~~-~---------~~~l~i~~v~~-d~g-Y~C~a~ 68 (450)
T 1z7z_I 3 SVSPSKVILPRGGSVLVTCSTS-C-DQPMLLGIETPLPKKELLLPGN-N---------RKVYELSNVQE-DSQ-PMCYSN 68 (450)
T ss_dssp EEESSEEEEETTEEEEEEEECC-S-SCCCEEEECSSSCEEECCSSTT-T---------EEEEEEEEECS-CBC-CEEEEE
T ss_pred ccCCCceEEecCCcEEEEEEcc-C-CCcccccccceeeecceEecCC-C---------ceEEEEEeccc-CCe-eEEEEe
Confidence 3445677899999999999995 5 66677 899987654321 1 34788999987 999 999998
Q ss_pred eCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC---EEEEEeCCEecCCCCCeeEEeeccceeE
Q psy11132 88 NMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL---TIRWLKDGKPLSPRFPVNVSDLDSFSSL 164 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~---~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 164 (243)
+..+..+..+.|.|..+|.+.........+.+|+.+.|.|.+ .+.|++ .+.|++++..+...... .......
T Consensus 69 ~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~-~g~~~~~~~~v~W~k~g~~l~~~~~~----~~~~~~~ 143 (450)
T 1z7z_I 69 CPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQV-EGGAPRANLTVVLLRGEKELKREPAV----GEPAEVT 143 (450)
T ss_dssp ETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEE-ECCBCGGGEEEEEEETTEEEEEEECC----TTTEEEE
T ss_pred CCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEe-cCCCCCcCcEEEEeeCCEEeeccccc----ccccceE
Confidence 766667777888888887766444333567899999999999 477776 99999999877533211 1222468
Q ss_pred EEEeecCCCCCeeEEEEEEccCccee--------eeEEEEEEeecCCCCCee----eeeccceeeeccCcccc-----cc
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAAQAR--------YSSKLQVKGNLNRLPPSY----TLVFSQASYMSTSYYSF-----EQ 227 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g~~~--------~~~~l~v~~~~~~~~p~~----~~~~~~~~~~~~~~~~~-----~~ 227 (243)
|.|..+..+|+|.|+|.|.|..|... ....+.|... +..+|.+ .+..++.+.+.|..... +.
T Consensus 144 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~-~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~ 222 (450)
T 1z7z_I 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL-PATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQ 222 (450)
T ss_dssp EEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC-CSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCE
T ss_pred EEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc-CCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceE
Confidence 99999999999999999999977533 2334444422 1244543 56678899999987654 48
Q ss_pred cceEEeCCee
Q psy11132 228 DSWMIDNENY 237 (243)
Q Consensus 228 ~~W~~~~~~~ 237 (243)
+.|+++|+.+
T Consensus 223 ~~W~~~~~~~ 232 (450)
T 1z7z_I 223 VHLALGDQRL 232 (450)
T ss_dssp EEEEETTEEC
T ss_pred EEEeCCCEeC
Confidence 9999998654
No 102
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=5.1e-26 Score=159.88 Aligned_cols=181 Identities=24% Similarity=0.308 Sum_probs=131.1
Q ss_pred CCCccCCCCCcccccCCeEEEEEE-eeCCCCC-ceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICS-ITKGDIP-LTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
|+.....+....+.+|+.+.|.|. + .+.|. +.+.|++++..+......... .......|.|.+++.+|+|.|+|.+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~p~~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~ 85 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPP-YHFPDDLSYRWLLNEFPVFITMDKRRF-VSQTNGNLYIANVEASDKGNYSCFV 85 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCC-SEESSCCEEEEEESSTTCBCCCSSSEE-ECTTTCCEEESSCCGGGCEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEecccc-ccCCCceEEEEEECCceeeeeeCCCeE-EEcCCCeEEECcCCcccCeEEEEEE
Confidence 444444467788999999999999 6 46677 899999999776422111111 1112567999999999999999999
Q ss_pred EeCCCcce---eEEEEEEEc-------CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 87 RNMVAEDT---QVQRLIVNV-------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 87 ~~~~~~~~---~~~~l~v~~-------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
.+..+... ..+.+.+.. +|.+..... ...+..|+.+.|.|.+ .+.|.+.+.|++++..+.......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~-- 161 (201)
T 3s97_C 86 SSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFK-DVYALMGQNVTLECFA-LGNPVPDIRWRKVLEPMPSTAEIS-- 161 (201)
T ss_dssp EEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECC-CEEEETTCCEEEEEEE-EEESCCEEEEEETTBCCCTTCEEE--
T ss_pred EecCCCcchhhcccceeeccccccCCCCCceEecCC-ceEEecCCcEEEEEEc-cCCCCCceEEEeCCCcCCCceeec--
Confidence 98665432 233333332 122222221 2456789999999999 588999999999999776542211
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.....|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 162 ---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 162 ---TSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp ---TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ---CCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 124689999999999999999999999999888888876
No 103
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.93 E-value=9.4e-26 Score=160.45 Aligned_cols=184 Identities=16% Similarity=0.106 Sum_probs=127.6
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeece--EEEEeecCCCCCeeEE
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNS--MLVIDSVSARHSGNYS 83 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~ 83 (243)
+..+|.+...+. ..+.+|++++|.|.+. + +.+.+.|+|+|..+...... .. ...... .|.|.+++.+|+|.|+
T Consensus 6 ~~~~P~i~~~p~-~~v~~G~~vtL~C~~~-~-~~~~~~W~k~g~~~~~~~~~-~~-~~~~~~~~~L~I~~v~~~D~G~Y~ 80 (218)
T 1uct_A 6 DFPMPFISAKSS-PVIPLDGSVKIQCQAI-R-EAYLTQLMIIKNSTYREIGR-RL-KFWNETDPEFVIDHMDANKAGRYQ 80 (218)
T ss_dssp GSCCCCEEESSC-SEEETTCCEEEEECCC-T-TCSEEEEEEEETTEEEECSE-EC-C----CCCEEEECSCCGGGCEEEE
T ss_pred CCCCCEEEecCC-CccCCCCCEEEEEEcC-C-CCCEEEEEECCCcccccccc-cC-CCCcceeeEEEEcccccccCEEEE
Confidence 345778877665 4689999999999984 4 56799999998765432111 00 011134 8999999999999999
Q ss_pred EEEEeCCCc--ceeEEEEEEEcCCC-ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 84 CTVRNMVAE--DTQVQRLIVNVPPK-IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 84 C~~~~~~~~--~~~~~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
|.+.+..+. .+..+.|.|...+. ......+...+.+|++++|.|.. .+.|.+.+.|+|+|..+... . ....
T Consensus 81 C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~~--~---~~~~ 154 (218)
T 1uct_A 81 CQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLPQ--H---QSGE 154 (218)
T ss_dssp EEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCCS--E---EECS
T ss_pred EEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeC-CCCCCCEEEEEECCCccccc--c---cCCC
Confidence 999997652 34567777765221 11111222467899999999976 46778899999999877642 1 1223
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCc-----ceeeeEEEEEEee
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAA-----QARYSSKLQVKGN 200 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g-----~~~~~~~l~v~~~ 200 (243)
....|.|.+++.+|+|.|+|.|.|... ..+..+.|.|.+.
T Consensus 155 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 155 HPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp SSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred ccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 357899999999999999999998642 2334577777743
No 104
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=5.1e-26 Score=172.17 Aligned_cols=178 Identities=26% Similarity=0.379 Sum_probs=134.8
Q ss_pred cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEE
Q psy11132 19 RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQR 98 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 98 (243)
..+.+|+.+.|.|.+. +.|.+.+.|++++..+....+............|.|.+++.+|+|.|+|.+.|..+.....+.
T Consensus 133 ~~v~~g~~v~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAA-GNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211 (334)
T ss_dssp EEEETTCCEEEECCCC-CSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEE
T ss_pred EEecCCCcEEEEEEcc-CCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEE
Confidence 5678999999999984 778889999999988866543321122223568999999999999999999999888888888
Q ss_pred EEEEcCCC----ccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEe----CCEecCCCCCee--EEee------ccce
Q psy11132 99 LIVNVPPK----IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK----DGKPLSPRFPVN--VSDL------DSFS 162 (243)
Q Consensus 99 l~v~~~p~----~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~----~~~~~~~~~~~~--~~~~------~~~~ 162 (243)
|.|...+. +.........+..|+.+.|.|.+ .|.|.+.+.|++ +|..+....... .... +...
T Consensus 212 l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~-~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (334)
T 1ry7_B 212 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV-YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKEL 290 (334)
T ss_dssp EEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCC-BCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTC
T ss_pred EEEecCCCCCCceEecCCCceEEeCCCCEEEEEEE-ecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccc
Confidence 88876432 11111122456789999999999 689999999999 666655332211 1110 1123
Q ss_pred eEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 163 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 163 ~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 291 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 291 EVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL 326 (334)
T ss_dssp CCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEE
T ss_pred cEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEE
Confidence 479999999999999999999999999999999988
No 105
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.93 E-value=2.2e-25 Score=159.65 Aligned_cols=177 Identities=16% Similarity=0.204 Sum_probs=116.9
Q ss_pred CcccccCCeEEEEEEeeCCCCC---ceeEEEECCeee-----------cC------CCceEEEE--eeeeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDIP---LTIKWLKDGRYL-----------DN------SAALSITH--VDQYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~---~~v~W~~~~~~~-----------~~------~~~~~~~~--~~~~~~~l~i~~~~ 75 (243)
.+.+.+|++++|.|.+. +.+. ..|.|+|++... .. ..+..... ...+..+|.|.+++
T Consensus 13 pV~v~~G~~v~L~C~v~-~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 13 PILAMVGEDADLPCHLF-PTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp CEEEETTSCEEEEEEEE-SCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CEEEEcCCcEEEEEEEE-CCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 46688999999999986 3332 379999876421 11 11111111 11235689999999
Q ss_pred CCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEe-cCCCCCee
Q psy11132 76 ARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKP-LSPRFPVN 154 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~-~~~~~~~~ 154 (243)
.+|+|.|+|.+.|..+.....+.+.+..++...... ..+..|+.+.|.|.+..+.|.|.++|++++.. +.......
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~---~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVD---VKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEE---EEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceecccce---eeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE
Confidence 999999999999987776665555554433322211 34567999999999965579999999986544 33332222
Q ss_pred EEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 155 VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 155 ~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
....++....+.+..++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred EECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 22223323445566778899999999999999999988888876
No 106
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.93 E-value=1.4e-25 Score=170.81 Aligned_cols=192 Identities=18% Similarity=0.205 Sum_probs=111.4
Q ss_pred eeEEEecCCCccCC----CCCcccccCCeEEEEEEee----CCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEee
Q psy11132 2 LVIFSTVPPKLSPT----NPERTLNVGERASLICSIT----KGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDS 73 (243)
Q Consensus 2 ~~l~v~~~p~~~~~----~~~~~~~~g~~~~l~C~~~----~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 73 (243)
+.|.|..+|..... +....+.+|+.+.|.|.+. .+.|.+.+.|++++..+.....+.. ....|.|.+
T Consensus 109 ~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~-----~~~~L~i~~ 183 (349)
T 4dep_C 109 FPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIP-----EGMNLSFLI 183 (349)
T ss_dssp EEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEE-----ETTEEEEES
T ss_pred EEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceee-----cCCEEEEee
Confidence 34666666554322 3345678999999999741 2578889999999998865433321 146799999
Q ss_pred cCCCCCeeEEEEEEeCC-Ccc---eeEEEEEEEcC------CCccccccCC-CCCCCCCcEEEEEEeec---CCCCCEEE
Q psy11132 74 VSARHSGNYSCTVRNMV-AED---TQVQRLIVNVP------PKIESFAFPF-DGLPEGARTRVICGVTH---GDPPLTIR 139 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~-~~~---~~~~~l~v~~~------p~~~~~~~~~-~~~~~g~~~~l~C~~~~---~~p~~~~~ 139 (243)
++.+|+|.|+|.+.|.. +.. +..+.|.|..+ |.+....... ..+..|+.+.|.|.+.. +.|.+.+.
T Consensus 184 v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~ 263 (349)
T 4dep_C 184 ALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVW 263 (349)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEE
T ss_pred eeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEE
Confidence 99999999999999976 443 56677777653 3332221111 16778999999999953 46889999
Q ss_pred EEeCCEecCC-CCCeeEE--------eeccceeEEEEeecCCCCC-eeEEEEEEccCcceeeeEEEEEE
Q psy11132 140 WLKDGKPLSP-RFPVNVS--------DLDSFSSLLSINSVSAAHS-GEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 140 W~~~~~~~~~-~~~~~~~--------~~~~~~~~l~i~~~~~~d~-g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
|++++..+.. ....... ......+.|.|.++..+|. |.|+|.|.|..|.....+.|.|.
T Consensus 264 W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 264 WTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp EESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC----
T ss_pred EEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 9999988765 1111110 0011235599999999999 99999999999999988888886
No 107
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.93 E-value=1.4e-24 Score=164.07 Aligned_cols=184 Identities=19% Similarity=0.224 Sum_probs=133.9
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCC-CceeEEEECCeeecCC-CceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDI-PLTIKWLKDGRYLDNS-AALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
..||.+........+.+|+.+.|.|.+. +.| .+.+.|++++..+... .++... ...|.|.+++.+|+|.|+|
T Consensus 126 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~-g~p~~~~i~W~k~~~~l~~~~~~~~~~-----~~~L~I~~v~~~D~G~Y~C 199 (329)
T 3oq3_B 126 RKPPSCIPETYELGTHDKYGIDLYCGIL-YAKHYNNITWYKNNQELIIDGTKYSQS-----GQNLIIHNPELEDSGRYDC 199 (329)
T ss_dssp CCCCSCEEEEEETTSSTTTCEEEECCCC-SCCCCCEEEEEETTEECCCSSSSEEEE-----TTEEEECSCCGGGCEEEEE
T ss_pred cCCCcEeccccceEEeCCCcEEEEeccC-CCCCCceEEEEECCccCCCCCceEecC-----CCEEEEeecChhhCEEEEE
Confidence 3456554444445577899999999985 777 7899999999988532 232221 5789999999999999999
Q ss_pred EEEeC--CCcce----eEEEEEEEcCCCc--cccccCCCCCCCCCcEEEEEEeecCCC---CC-EEEEEeCCEecCC-CC
Q psy11132 85 TVRNM--VAEDT----QVQRLIVNVPPKI--ESFAFPFDGLPEGARTRVICGVTHGDP---PL-TIRWLKDGKPLSP-RF 151 (243)
Q Consensus 85 ~~~~~--~~~~~----~~~~l~v~~~p~~--~~~~~~~~~~~~g~~~~l~C~~~~~~p---~~-~~~W~~~~~~~~~-~~ 151 (243)
.+.|. .+... ..+.|.|..+|.. +........+..|+.+.|.|.+. +.| ++ .+.|++++..+.. ..
T Consensus 200 ~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~~~i~v~W~~~g~~i~~~~~ 278 (329)
T 3oq3_B 200 YVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAV-STSLLVDDVLIDWENPSGWIIGLDF 278 (329)
T ss_dssp EEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEE-ETTCCTTCCEEEEECTTSCBCCBCS
T ss_pred EEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEE-ECCCCCCCcEEEEEECCeeeeccCC
Confidence 99987 55433 3377888776632 11122225678899999999995 665 66 8999999987532 22
Q ss_pred CeeEE---eeccceeEEEEeecCCCCCe-eEEEEEEccCcceeeeEEEEE
Q psy11132 152 PVNVS---DLDSFSSLLSINSVSAAHSG-EYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 152 ~~~~~---~~~~~~~~l~i~~~~~~d~g-~y~C~~~n~~g~~~~~~~l~v 197 (243)
..... ......+.|.|.++..+|+| .|+|.|.|..|....++.|.|
T Consensus 279 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 279 GVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp SEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred ceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 21111 11113578999999999999 999999999999988887766
No 108
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.93 E-value=1.5e-25 Score=170.39 Aligned_cols=219 Identities=16% Similarity=0.220 Sum_probs=139.0
Q ss_pred CCcccccCCeEEEEEEeeCCC-CCceeEEEEC--Ceeec-----------------CCCceEEEEee-eeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKGD-IPLTIKWLKD--GRYLD-----------------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~-~~~~v~W~~~--~~~~~-----------------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+.+.. +.+.+.|+|+ +..+. ...++.+.... ....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (344)
T 1za6_B 8 GAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLR 87 (344)
T ss_dssp CCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCC
Confidence 345688999999999996432 3568999986 33221 12344433221 234689999999
Q ss_pred CCCCeeEEEEEEeCCCcceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCC
Q psy11132 76 ARHSGNYSCTVRNMVAEDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPR 150 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~ 150 (243)
.+|+|.|+|.+.+..+.......|.|.. +|.+..... ...+..|+.+.|.|.+.++.|. +.+.|++++..+...
T Consensus 88 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 166 (344)
T 1za6_B 88 SEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVH 166 (344)
T ss_dssp GGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECC-SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEE
T ss_pred cccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccc-cccccCCCcEEEEEEEeeEECCCeEEEEecCCccCcee
Confidence 9999999999988544444456777763 232222222 2456789999999999644464 799999998764211
Q ss_pred CCeeEEeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEe-------------------ecCCCCCee
Q psy11132 151 FPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKG-------------------NLNRLPPSY 208 (243)
Q Consensus 151 ~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~-------------------~~~~~~p~~ 208 (243)
........+ ...+.|.|..+..+| |.|+|.|.|..+.......+.+.. .....+|.+
T Consensus 167 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v 245 (344)
T 1za6_B 167 TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQV 245 (344)
T ss_dssp ECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEE
T ss_pred ECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEE
Confidence 000000011 113578898888777 999999999988643332222100 012245665
Q ss_pred eee-------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 209 TLV-------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 209 ~~~-------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.+. .+..+.+.|...++ | .+.|++||+.+
T Consensus 246 ~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 285 (344)
T 1za6_B 246 YTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 285 (344)
T ss_dssp EEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCC
T ss_pred EEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeEC
Confidence 433 24457889988764 2 68999999765
No 109
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.93 E-value=3.2e-25 Score=157.37 Aligned_cols=181 Identities=15% Similarity=0.263 Sum_probs=125.7
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceeec------------CCCceEEEEeeeeceEEEEeecC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLD------------NSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
|.+...+ ...+.+|++++|.|.+. +.+.+.+.|+|. +.... ...++.... ......|.|.+++
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 78 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGD-KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SGNMATLTISKAQ 78 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECS-STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEESSCC
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcC-CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cCCEEEEEECCCC
Confidence 4445555 67899999999999995 778889999982 22111 123444333 3336789999999
Q ss_pred CCCCeeEEEEEEeCCC---cceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEec
Q psy11132 76 ARHSGNYSCTVRNMVA---EDTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPL 147 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~ 147 (243)
.+|+|.|+|.+.+..+ .......|.|. .+|.+...+.. ..+..|+.+.|.|.+.+..|+ +.+.|+++|..+
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 157 (213)
T 3mj8_L 79 AGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPS-SEELKTNQATLVCMINGFYPADVAVTWEADGTPI 157 (213)
T ss_dssp GGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred hhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCC-cccccCCcEEEEEEeeceeCCCeEEEEEcCCccc
Confidence 9999999999999877 34556778887 44444433222 233479999999999643444 599999999988
Q ss_pred CCCCCeeE-Eeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 148 SPRFPVNV-SDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 148 ~~~~~~~~-~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
........ ...+ ...+.|.|..+..+|+|.|+|.|.|..+....++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 158 TQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 75321110 0011 11356899999999999999999999876665543
No 110
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.93 E-value=1.7e-25 Score=169.08 Aligned_cols=190 Identities=15% Similarity=0.203 Sum_probs=142.6
Q ss_pred eeEEEecCCCccC--CCCCcccccC---CeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEE-EeeeeceEEEEeecC
Q psy11132 2 LVIFSTVPPKLSP--TNPERTLNVG---ERASLICSITKGDIPLTIKWLKDGRYLDNSAALSIT-HVDQYNSMLVIDSVS 75 (243)
Q Consensus 2 ~~l~v~~~p~~~~--~~~~~~~~~g---~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~ 75 (243)
+.|.|..+|.+.. .+....+.+| +.+.|.|.+..+.|.+.+.|++++............ ..-.....|.|..++
T Consensus 123 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 202 (331)
T 3u83_A 123 LNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSR 202 (331)
T ss_dssp EEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCG
T ss_pred EEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEecc
Confidence 4577788887643 3556678888 789999984358888899999963221110000000 000113568899999
Q ss_pred CCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEecCCCCCee
Q psy11132 76 ARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSPRFPVN 154 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~~~~~~~~ 154 (243)
.+|.|.|+|.+.+..+..+..+.|.|..+|.+.........+..|+.+.|.|.+ .+.|.+. +.|++++..+.....
T Consensus 203 ~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~i~W~~~~~~~~~~~~-- 279 (331)
T 3u83_A 203 EAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKA-DANPPATEYHWTTLNGSLPKGVE-- 279 (331)
T ss_dssp GGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEE-EEESCCCEEEEEETTBSCCTTEE--
T ss_pred ccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeC-cCCCCCCEEEEEECCCcccccce--
Confidence 999999999999998888888888888888766554444567889999999999 5888887 999999988765421
Q ss_pred EEeeccceeEEEEe-ecCCCCCeeEEEEEEccCcceeeeEEEEEEe
Q psy11132 155 VSDLDSFSSLLSIN-SVSAAHSGEYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 155 ~~~~~~~~~~l~i~-~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
. ....|.|. ++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 280 ~-----~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 320 (331)
T 3u83_A 280 A-----QNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITE 320 (331)
T ss_dssp E-----ETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC
T ss_pred e-----cCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEec
Confidence 1 13679999 8999999999999999999998888888874
No 111
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.6e-25 Score=167.84 Aligned_cols=182 Identities=11% Similarity=0.140 Sum_probs=133.6
Q ss_pred CCCccCCCC-CcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee-eeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNP-ERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD-QYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
+|.+...+. ...+.+|+.+.|.|.+..+.|.+.+.|++++..+....++.+.... .....|.|.+++.+|+|.|+|.+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 555554433 6778999999999999547888899999999999887666554432 33467999999999999999999
Q ss_pred EeCCCcceeEEEEEEE---------------------cCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCC
Q psy11132 87 RNMVAEDTQVQRLIVN---------------------VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDG 144 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~ 144 (243)
.+..... ...+.+. .+|.+... .. ..+..|+.+.|.|.+ .+.|.+ .+.|++++
T Consensus 186 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~-~~v~~G~~~~l~C~~-~~~p~~~~v~W~~~g 260 (312)
T 2y23_A 186 QDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LS-WEVTGECNVLLKCKV-ANIKKETHIVWYKDE 260 (312)
T ss_dssp ESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-EE-EEEETTTEEEEEEEE-ESCCSSCEEEEEETT
T ss_pred EeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceeec-ce-EEEeCCCEEEEEEEE-cCCCCCCEEEEeeCC
Confidence 7644333 2333331 11221111 11 356789999999999 588877 99999999
Q ss_pred EecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 145 KPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..+......... .....|.|.++..+|+|.|+|.|.|..|....++.|.+.
T Consensus 261 ~~~~~~~~~~~~---~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 261 REISVDEKHDFK---DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEEEEECCC-------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EECCCCCcEEEE---CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 988744333322 224789999999999999999999999999888887653
No 112
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.93 E-value=1.3e-24 Score=152.84 Aligned_cols=173 Identities=14% Similarity=0.218 Sum_probs=117.0
Q ss_pred EEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 5 FSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 5 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
.+..+|.+...+. ..+.+|++++|.|.+. .+.+.+.|+|+|..+.................|.|.+++.+|+|.|+|
T Consensus 4 ~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 4 GVHRKPSLLAHPG-PLVKSEETVILQCWSD--VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp ---CCCEEEEESC-SEEETTCCEEEEEEES--SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEE
T ss_pred CcCCCCeEEEEcC-CccCCCCcEEEEEecc--CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEE
Confidence 4456777776665 6688999999999984 356699999998765432111101111235789999999999999999
Q ss_pred EEEeCC-----CcceeEEEEEEEcC---CCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 85 TVRNMV-----AEDTQVQRLIVNVP---PKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 85 ~~~~~~-----~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
.+.+.. ...+..+.|.|... |.+... +...+.+|++++|.|.+ .+ +.+.+.|+|+|..+.........
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~--p~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~ 156 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQ--PGPTVLAGENVTLSCSS-RS-SYDMYHLSREGEAHERRLPAGPK 156 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEE--SCSEECTTCEEEEEEEE-SS-CCSEEEEEETTCSSCEEEECEEE
T ss_pred eEecCCCCccccCCCCCEEEEeeccCCCCceecC--CCCccCCCCeEEEEEeC-CC-CCceEEEEECCcccCcccccccc
Confidence 998642 12355677888754 222221 22457899999999998 45 56899999999876532111111
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
........|.|.+++ |+|.|+|.|.+..
T Consensus 157 ~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 157 VNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp ETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred cCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 111225779999998 9999999998753
No 113
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.93 E-value=2.9e-24 Score=174.14 Aligned_cols=196 Identities=16% Similarity=0.179 Sum_probs=144.8
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCcee----EEEE--CCe--eecC---------CCceEEEEe-e
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTI----KWLK--DGR--YLDN---------SAALSITHV-D 63 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v----~W~~--~~~--~~~~---------~~~~~~~~~-~ 63 (243)
+.|.|..+|.+...+....+.+|+.+.|.|.+. +.|.+.+ +|++ +|. .+.. ..++.+... .
T Consensus 324 ~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~-~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~ 402 (585)
T 2ocw_A 324 WQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYN-RKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG 402 (585)
T ss_pred EEEEEecccccccCCcceEEEeCCcEEEEEecC-CCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCC
Confidence 457888899888888888899999999999994 7777666 7999 886 4432 223332211 1
Q ss_pred eeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeec---CCCCCEEEE
Q psy11132 64 QYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTH---GDPPLTIRW 140 (243)
Q Consensus 64 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~---~~p~~~~~W 140 (243)
.+..+|.|.+++.+|+|.|+|.+ |..+.....+.|.|...|.....+ ....+..|+.+.|.|.+.. +.|.+.+.|
T Consensus 403 ~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W 480 (585)
T 2ocw_A 403 NGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVP-GNVTAVLGETLKVPCHFPCKFSSYEKYWCKW 480 (585)
T ss_pred CcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccC-CceeEecCCcEEEEEEecCCCCCCccEEEEE
Confidence 12345999999999999999999 888888888889988754443332 3356789999999999841 677889999
Q ss_pred EeCCEecCCCCC------eeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceee-eEEEEEEee
Q psy11132 141 LKDGKPLSPRFP------VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY-SSKLQVKGN 200 (243)
Q Consensus 141 ~~~~~~~~~~~~------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~-~~~l~v~~~ 200 (243)
+++|..+..... ..........+.|.|.++..+|+|.|+|.|.|..|.... .+.|.|...
T Consensus 481 ~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~ 547 (585)
T 2ocw_A 481 NNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEER 547 (585)
T ss_pred eecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEee
Confidence 999987653321 111111233478999999999999999999999986654 488888843
No 114
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.93 E-value=4.1e-25 Score=176.30 Aligned_cols=210 Identities=9% Similarity=0.093 Sum_probs=138.2
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCccee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQ 95 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 95 (243)
+....+.+|++++|.|.+. +.+...+.|++++..+.....+.. .+....+|.|.+++.+|+|.|+|.+.+..+....
T Consensus 55 ~~~~~v~~g~~~~L~c~~~-~~~~~~~~W~~~~~~l~~~~~~~~--~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~ 131 (527)
T 3qs9_E 55 AAAVEVDVSASITLQVLVD-APGNISCLWVFKHSSLNCQPHFDL--QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131 (527)
T ss_dssp -CEEEECSSCCEEEEEECS-CCSSCEEEEEETTEEECCCCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEEE
T ss_pred eeeEEEeccccEEEEEEEe-cCCceeEEEEecCCccCcccccCC--CcceEEEEEECcCChhhCeeEEEEEEeccccEEE
Confidence 3367899999999999994 777789999999988765444322 2222456999999999999999999988776665
Q ss_pred EEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCC
Q psy11132 96 VQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHS 175 (243)
Q Consensus 96 ~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 175 (243)
.+.|.|. |..............|+...|.|.+ .|.|.|.+.|++++..+...... ....-......+..+|+
T Consensus 132 ~~~v~v~--~~~~~~~~~p~~~~~~~~~~L~C~a-~G~P~P~i~W~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~d~ 203 (527)
T 3qs9_E 132 LFTVSIR--NTLLYTLRRPYFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESCKEE-----SPAVVKKEEKVLHELFG 203 (527)
T ss_dssp EEEEEEC-------CEEEEEEEECSSSSCEEEEE-EESSCCEEEEEEC------------------CEEECCSEECCCCS
T ss_pred EEEEEEC--CceeeccCCCcEEecCCceEEEEEE-ceecCCeEEEEECCCCCcccccc-----CCcEEEEeeeeccccCC
Confidence 5555554 3222111111123456777899999 69999999999988765421100 00011122233457899
Q ss_pred eeEEEEEEccCcceeee-EEEEEEeecCCCCCeeeeeccceeeeccCcc-cc--cccceEEeCCe
Q psy11132 176 GEYTCVASNTAAQARYS-SKLQVKGNLNRLPPSYTLVFSQASYMSTSYY-SF--EQDSWMIDNEN 236 (243)
Q Consensus 176 g~y~C~~~n~~g~~~~~-~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~W~~~~~~ 236 (243)
|.|+|.|.|..|..... +.+.|...+...|+...+..++.+.+.|... .. +.++|+++|..
T Consensus 204 G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~ 268 (527)
T 3qs9_E 204 TDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA 268 (527)
T ss_dssp SCEEEEEECSSCEEEEECEEEESSSCCCCSCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSC
T ss_pred EEEEEEEEeCCCcccceEEEEEEeccCccCCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEE
Confidence 99999999999977554 6677664444445566778899999999874 43 48999999875
No 115
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=2.1e-24 Score=150.18 Aligned_cols=177 Identities=17% Similarity=0.256 Sum_probs=123.3
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.+|.+...+.. .+.+|++++|.|.+. + +...+.|+|++..+...... .........|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 77 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGN-Y-GAVEYQLHFEGSLFAVDRPK--PPERINKVKFYIPDMNSRMAGQYSCIYR 77 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECC-T-TCCEEEEEETTEEEEEECCS--SCTTCCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecC-C-CCCEEEEEECCCcccccccc--cCCCcceeEEEeCcCCcccCeEEEEEec
Confidence 45677766655 789999999999984 4 34689999999876421100 0011125789999999999999999998
Q ss_pred eCCC--cceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccce
Q psy11132 88 NMVA--EDTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 162 (243)
Q Consensus 88 ~~~~--~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 162 (243)
+..+ ..+..+.|.|.. +|.+... +...+.+|+.++|.|.+ .+ +++.+.|+++|..+... .......
T Consensus 78 ~~~~~~~~s~~~~l~V~~~~~~p~i~~~--p~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~-----~~~~~~~ 148 (188)
T 1oll_A 78 VGELWSEPSNLLDLVVTEMYDTPTLSVH--PGPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSHVQ-----RGYGKVQ 148 (188)
T ss_dssp ETTEECCCCCCEEEEEESCSCCCEEEEE--SCSEEETTCEEEEEEEC-SS-SCSEEEEEEESSSCEEE-----EEECSSE
T ss_pred CCCCCCCCCCceEEEecccCCCCeEEEC--CCCccccCCEEEEEEEc-CC-CCCEEEEEECCcccccc-----ccCCCce
Confidence 8644 235667777765 2333222 22456789999999997 34 45799999998765431 1122335
Q ss_pred eEEEEeecCCCCCeeEEEEEEccCc---ceeeeEEEEEE
Q psy11132 163 SLLSINSVSAAHSGEYTCVASNTAA---QARYSSKLQVK 198 (243)
Q Consensus 163 ~~l~i~~~~~~d~g~y~C~~~n~~g---~~~~~~~l~v~ 198 (243)
..|.|.+++.+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 149 ~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 149 AEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred eEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 7899999999999999999998752 22344566554
No 116
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.93 E-value=2.4e-25 Score=158.19 Aligned_cols=181 Identities=18% Similarity=0.232 Sum_probs=124.4
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCc---eeEEEECCeeecCCC------------------ceEEEE--eeeeceEEEEe
Q psy11132 16 NPERTLNVGERASLICSITKGDIPL---TIKWLKDGRYLDNSA------------------ALSITH--VDQYNSMLVID 72 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~---~v~W~~~~~~~~~~~------------------~~~~~~--~~~~~~~l~i~ 72 (243)
++.+.+.+|++++|.|.+. +.+.+ .|.|+|++..+.... +..... ......+|.|.
T Consensus 6 p~~vtv~~G~~v~L~C~v~-~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYR-GDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CSEEEEETTSCEEECCEEC-CCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCeEEEEcCCCEEEEEEEE-cCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4567789999999999995 55543 589999875432111 111100 01123579999
Q ss_pred ecCCCCCeeEEEEEEeCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC
Q psy11132 73 SVSARHSGNYSCTVRNMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 151 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~ 151 (243)
+++.+|+|.|.|.+.+..+. ......+.+..++...........+..|..+.+.|.+ .+.|++.++|++++..+....
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~-~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTA-EGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEE-EEBSCCEEEEEESSCCEEEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeec-cCCcCceEEEEECCcccccCc
Confidence 99999999999999876654 3334445555444443333333456789999999999 589999999999987665432
Q ss_pred CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 152 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 152 ~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
...........+.|.|..+..+|+|.|+|.|.|..|.....+++.|.
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 22111112224679999999999999999999999987776666654
No 117
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.93 E-value=1.7e-25 Score=162.52 Aligned_cols=177 Identities=18% Similarity=0.198 Sum_probs=120.3
Q ss_pred CCcccccCCeEEEEEEeeC--CCCCceeEEEECCeeec------------------------------CCCceEEEEeee
Q psy11132 17 PERTLNVGERASLICSITK--GDIPLTIKWLKDGRYLD------------------------------NSAALSITHVDQ 64 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~--~~~~~~v~W~~~~~~~~------------------------------~~~~~~~~~~~~ 64 (243)
..+.+.+|+++.|.|.+.. ..+.+.+.|++++.... ...+..+.. .
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~ 87 (250)
T 2fbo_J 10 TEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN--L 87 (250)
T ss_dssp SEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC--T
T ss_pred CceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc--C
Confidence 4566889999999999852 16677999999875321 011111110 1
Q ss_pred eceEEEEeecCCCCCeeEEEEEEeCCCcc-----eeEEEEEEEcCCC---ccccccCCCCCCCCCcEEEEEEeecCCCCC
Q psy11132 65 YNSMLVIDSVSARHSGNYSCTVRNMVAED-----TQVQRLIVNVPPK---IESFAFPFDGLPEGARTRVICGVTHGDPPL 136 (243)
Q Consensus 65 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~p~---~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 136 (243)
....|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..++. +.........+.+|+.+.|.|.+ .+.|.+
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~g~p~p 166 (250)
T 2fbo_J 88 AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC-TDCANA 166 (250)
T ss_dssp TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE-ESCTTC
T ss_pred CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe-cCCCCC
Confidence 13579999999999999999999876643 4477788876522 22212222445679999999999 588888
Q ss_pred EEEEEeCCEecCCCCCee--------------------EEeeccceeEEEEeecCCCCCeeEEEEEEccCc---ceeeeE
Q psy11132 137 TIRWLKDGKPLSPRFPVN--------------------VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA---QARYSS 193 (243)
Q Consensus 137 ~~~W~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g---~~~~~~ 193 (243)
.+.|++++..+....... ..........|.|.++..+|+|.|+|.|.|..| ....++
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 999999998775432110 000000136899999999999999999999555 444444
Q ss_pred EEE
Q psy11132 194 KLQ 196 (243)
Q Consensus 194 ~l~ 196 (243)
.|.
T Consensus 247 ~l~ 249 (250)
T 2fbo_J 247 ILK 249 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 118
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.93 E-value=2.2e-25 Score=153.39 Aligned_cols=157 Identities=15% Similarity=0.148 Sum_probs=115.2
Q ss_pred CcccccCCeEEEEEEee-CCCCCceeEEEECCeeec----------CCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 18 ERTLNVGERASLICSIT-KGDIPLTIKWLKDGRYLD----------NSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~-~~~~~~~v~W~~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.+.+.+|++++|.|... ...+.+.|.|+|++..+. ...++.+. .+++|.|.+++.+|+|.|+|.+
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~----~~gsL~I~~v~~~D~G~Y~C~~ 80 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL----ANGDLKIKNLTRDDSGTYNVTV 80 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEEC----TTSCEEESSCCGGGCEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEEC----CCCcEEEcccccccCEEEEEEE
Confidence 35578999999999432 225566999999997542 22333331 1445999999999999999999
Q ss_pred EeCCCcc--eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeE
Q psy11132 87 RNMVAED--TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSL 164 (243)
Q Consensus 87 ~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 164 (243)
.+..+.. ...+.|.|..++..+... ..+..+.|.|.+ .|.|.+.+.|++++..+.....
T Consensus 81 ~n~~g~~~~~~~~~l~V~~~~~~p~i~------~~~~~v~L~C~~-~g~p~p~i~W~~~g~~l~~~~~------------ 141 (176)
T 1hng_A 81 YSTNGTRILNKALDLRILEMVSKPMIY------WECSNATLTCEV-LEGTDVELKLYQGKEHLRSLRQ------------ 141 (176)
T ss_dssp EETTCCEEEEEEEEEEEECCCCCCEEE------EETTTTEEEEEC-SSCSSCEEEEEETTEEEEEESS------------
T ss_pred EeCCCCEEEEEEEEEEEeCCCCCCEEE------ecCCcEEEEEEe-cCCCCcEEEEEECCEECCCCCc------------
Confidence 9988875 667788887654322211 124458999999 6888899999999987753321
Q ss_pred EEEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
+.|..+..+|+|.|+|.|.|..|.......|.+
T Consensus 142 ~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 142 KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 345577899999999999999998877766543
No 119
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.93 E-value=2.4e-24 Score=153.75 Aligned_cols=180 Identities=14% Similarity=0.232 Sum_probs=121.8
Q ss_pred CCCcccccCCeEEEEEEeeCCCC-----CceeEEEECCeeec---------C------CCceEEEEe--eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI-----PLTIKWLKDGRYLD---------N------SAALSITHV--DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~-----~~~v~W~~~~~~~~---------~------~~~~~~~~~--~~~~~~l~i~~ 73 (243)
+..+.+.+|+++.|.|.+. +.| .+.+.|++++..+. . ..+..+... .....+|.|.+
T Consensus 8 ~~~v~~~~G~~v~L~C~~~-~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFP-VEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp CSEEEEETTSCEEEEEECC-CCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CccEEEEcCCcEEEEeEec-CCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 3455688999999999984 444 34899999763321 0 122222110 11246899999
Q ss_pred cCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeC-CEecCCCCC
Q psy11132 74 VSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKD-GKPLSPRFP 152 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~-~~~~~~~~~ 152 (243)
++.+|+|.|+|.+.+ .+.....+.|.|..++........ ..+..|+.+.|.|.+ .|.|.+.+.|+++ +..+.....
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~-~~~~~g~~v~L~C~~-~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRIL-VVDPVTSEHELTCQA-EGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEE-EEETTTTEEEEEEEE-EEBSCCEEEEEETTCCEECCEEE
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceee-eeecCCCcEEEEEEe-cCCCCCeEEEEECCCceecCccc
Confidence 999999999999998 555666788888876654432221 245689999999999 5799999999998 555543221
Q ss_pred eeEEe-eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEe
Q psy11132 153 VNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 153 ~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
..... ..+......+..+..+|.|.|+|.|.|..|.....+.+.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecC
Confidence 11111 111112222334567899999999999999999999998873
No 120
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.93 E-value=6.8e-26 Score=168.34 Aligned_cols=213 Identities=21% Similarity=0.271 Sum_probs=147.9
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+++.|.|.+. +. +.|++++.. ..... .....+.|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~P~i~~~~~~~~v~~G~~v~L~C~~~-~~----v~W~~~~~~-----~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~ 70 (292)
T 4dkd_C 2 GSIPVIEPSVPELVVKPGATVTLRCVGN-GS----VEWDGPPSP-----HWTLY-SDGSSSILSTNNATFQNTGTYRCTE 70 (292)
T ss_dssp --CCEEESCCSSCEECTTCCEEEEEECS-SC----CCBCCCCCS-----SCEEC-CBTTEEEEEESSCCGGGCSCEEECC
T ss_pred CCCceecCCCCeEEEcCCCcEEEEEcCC-Cc----eEEccCCCC-----ceEEe-ccCceEEEEEcccccccCEEEEEEE
Confidence 3688888888888999999999999985 42 899976532 11111 1122468999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC--CEEEEEeC-CEecCCCCCeeEEeecccee
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKD-GKPLSPRFPVNVSDLDSFSS 163 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~-~~~~~~~~~~~~~~~~~~~~ 163 (243)
.+..+..+..+.|.|..+|...........+.+|+.+.|.|.+. + |. +.+.|+++ +..+.......... ..
T Consensus 71 ~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~-~-~~~~~~v~W~~~~~~~~~~~~~~~~~~----~~ 144 (292)
T 4dkd_C 71 PGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLT-D-PVLEAGVSLVRVRGRPLMRHTNYSFSP----WH 144 (292)
T ss_dssp CC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEES-S-GGGGSSEEEEEGGGCCCCSSCCEECCS----SS
T ss_pred ccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCC-C-CCcceeEEEEecCCCccccCCcccccC----Cc
Confidence 98877778888888888776533333335577899999999994 5 43 78999987 44444332222211 23
Q ss_pred EEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEEeecCCCCCeeeee-------ccceeeeccCccccc---ccceEE
Q psy11132 164 LLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSFE---QDSWMI 232 (243)
Q Consensus 164 ~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~~---~~~W~~ 232 (243)
.|.|.++..+|+|.|+|.|.|..+... ..+.|.|..... .+|.+... .+..+.+.|.....+ .+.|++
T Consensus 145 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~-~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~ 223 (292)
T 4dkd_C 145 GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIP-GPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQH 223 (292)
T ss_dssp CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCC-SSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCB
T ss_pred eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC-CCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeC
Confidence 389999999999999999999877653 477888873221 26655443 456677788766543 577888
Q ss_pred eCCee
Q psy11132 233 DNENY 237 (243)
Q Consensus 233 ~~~~~ 237 (243)
++..+
T Consensus 224 ~~~~~ 228 (292)
T 4dkd_C 224 NNTKL 228 (292)
T ss_dssp SSCCC
T ss_pred CCccc
Confidence 87643
No 121
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.6e-24 Score=150.33 Aligned_cols=161 Identities=18% Similarity=0.263 Sum_probs=113.8
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec---CC---------------CceEEEEeeeeceEEEEeecCCC
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD---NS---------------AALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~---~~---------------~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+..+.+.+|++++|.|.+..+.+.+.+.|++++..+. .. .+..+. .+.+|.|.+++.+
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~----~~~sL~I~~v~~~ 80 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT----QSYSLQLSNLKME 80 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC----TTCCEEECSCCGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC----CCeEEEECCCCcc
Confidence 4567788999999999985334556999999976542 10 011111 2578999999999
Q ss_pred CCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCC-cEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 78 HSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGA-RTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
|+|.|+|.+.+..+.....+.|.|..++..+...........|. .+.|.|.+..+.|.+.+.|++++..+..
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~------- 153 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS------- 153 (193)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------
T ss_pred cCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------
Confidence 99999999998887666678888877654333222212233465 8999999953356899999999886532
Q ss_pred eeccceeEEEEeecCCC-CCeeEEEEEEccCcceeee
Q psy11132 157 DLDSFSSLLSINSVSAA-HSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~-d~g~y~C~~~n~~g~~~~~ 192 (243)
...|.|.....+ |+|.|+|.|.|..|..+..
T Consensus 154 -----~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 154 -----QPNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp -----SSEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred -----CCeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 134666544454 8999999999999987544
No 122
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.92 E-value=8.2e-25 Score=162.48 Aligned_cols=193 Identities=18% Similarity=0.235 Sum_probs=137.5
Q ss_pred eeEEEecCCCc-cCCCCCcccccCCeEEEEEEeeCCCC-CceeEEEEC-CeeecCCCceEEEEeeeeceEEEEeecCCCC
Q psy11132 2 LVIFSTVPPKL-SPTNPERTLNVGERASLICSITKGDI-PLTIKWLKD-GRYLDNSAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 2 ~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
+.|.|..+|.. ...+....+.+|+.+.|.|.+. +.+ .+.+.|+++ +..+....+..... ...|.|.+++.+|
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d 155 (292)
T 4dkd_C 81 IHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLT-DPVLEAGVSLVRVRGRPLMRHTNYSFSP----WHGFTIHRAKFIQ 155 (292)
T ss_dssp ECCEECCSSCCEEESCSEEEEETTSCEECCEEES-SGGGGSSEEEEEGGGCCCCSSCCEECCS----SSCCEETTCCGGG
T ss_pred EEEEEcCccccccccCCeEEEcCCCcEEEeeeCC-CCCcceeEEEEecCCCccccCCcccccC----CceEEECCCCHHH
Confidence 35667777763 4446677899999999999995 422 268999997 44444443332221 3449999999999
Q ss_pred CeeEEEEEEeCCCcc-eeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe
Q psy11132 79 SGNYSCTVRNMVAED-TQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~~-~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~ 153 (243)
+|.|+|.+.+..+.. +..+.|.|.. +|.+...+.. ..+..|+.+.|.|.+....+++.+.|++++..+......
T Consensus 156 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~-~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~ 234 (292)
T 4dkd_C 156 SQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAE-LVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQS 234 (292)
T ss_dssp CSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSC-BCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEE
T ss_pred CeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCc-eeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccc
Confidence 999999999876653 4578888886 5555443332 456789999999999633445789999998876544322
Q ss_pred eEEee-ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEee
Q psy11132 154 NVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGN 200 (243)
Q Consensus 154 ~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~ 200 (243)
..... ....+.|.|.++..+|+|.|+|.|.|..|....++.|.|.+.
T Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 235 DFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp EEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred eeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeC
Confidence 11111 112468999999999999999999999999999999988744
No 123
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.92 E-value=1.1e-24 Score=170.76 Aligned_cols=216 Identities=18% Similarity=0.254 Sum_probs=141.7
Q ss_pred CCCCcccccCCeEEEEEEeeCCCCC----ceeEEEECC--eeec------------CCCceEEEEeeeeceEEEEeecCC
Q psy11132 15 TNPERTLNVGERASLICSITKGDIP----LTIKWLKDG--RYLD------------NSAALSITHVDQYNSMLVIDSVSA 76 (243)
Q Consensus 15 ~~~~~~~~~g~~~~l~C~~~~~~~~----~~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~ 76 (243)
.+..+.+.+|+++.|.|.+. +.+. +.+.|++++ ..+. ...++.... ......|.|.+++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~ 84 (438)
T 1qgc_4 7 SPASLAVSLGQRATISCRAS-ESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG-SRTDFTLTIDPVEA 84 (438)
T ss_dssp ECSEEEECTTSCEEEEEEES-SCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEE-ETTEEEEEESSCCG
T ss_pred cCCeEEeeCCCCEEEEEecC-CCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEc-cCCcEEEEeCCCcC
Confidence 35566789999999999984 5554 489999963 2210 123443332 22356899999999
Q ss_pred CCCeeEEEEEEeCCCcc-eeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCC
Q psy11132 77 RHSGNYSCTVRNMVAED-TQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRF 151 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~ 151 (243)
+|+|.|+|.+.+..+.. .....|.|.. +|.+...... .....|+.+.|.|.+.++.|.+ .+.|+++|..+....
T Consensus 85 ~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 163 (438)
T 1qgc_4 85 DDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 163 (438)
T ss_dssp GGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred cCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCC-hhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCc
Confidence 99999999999876642 3445666653 3333322211 1223578999999996547776 999999999887551
Q ss_pred CeeEEe---ecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEee--cCCCCCeeeeeccceeeeccCcc
Q psy11132 152 PVNVSD---LDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGN--LNRLPPSYTLVFSQASYMSTSYY 223 (243)
Q Consensus 152 ~~~~~~---~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~--~~~~~p~~~~~~~~~~~~~~~~~ 223 (243)
...... .++ ..+.|.|.++..+|+|.|+|.|.|..+.......+..... ....|+...+..++.+.+.|...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 243 (438)
T 1qgc_4 164 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTAS 243 (438)
T ss_dssp EEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEE
T ss_pred eeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEEc
Confidence 110000 011 1357999999999999999999998887533332221100 00023345567788899999876
Q ss_pred ccc----ccceEEe
Q psy11132 224 SFE----QDSWMID 233 (243)
Q Consensus 224 ~~~----~~~W~~~ 233 (243)
..+ .+.|+++
T Consensus 244 g~p~~~~~v~W~k~ 257 (438)
T 1qgc_4 244 GFIFNRCAMSWVRQ 257 (438)
T ss_dssp SSCGGGSCEEEEEE
T ss_pred ccccCCcEEEEEEC
Confidence 443 7999998
No 124
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.92 E-value=2.4e-25 Score=167.76 Aligned_cols=228 Identities=14% Similarity=0.179 Sum_probs=138.0
Q ss_pred cCCCccCCCCCcccccC--CeEEEEEEeeCCCC-CceeEEEECCeeecCCCceE-EEEee---eeceEEEEeecCCCCCe
Q psy11132 8 VPPKLSPTNPERTLNVG--ERASLICSITKGDI-PLTIKWLKDGRYLDNSAALS-ITHVD---QYNSMLVIDSVSARHSG 80 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g--~~~~l~C~~~~~~~-~~~v~W~~~~~~~~~~~~~~-~~~~~---~~~~~l~i~~~~~~d~G 80 (243)
.||.+...+.......| +.+.|.|.+.+..| .+.|.|+++|..+....... ....+ ...+.|.|......|.|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 46666655433333334 69999999975444 47999999999886543211 11111 11346788888888999
Q ss_pred eEEEEEEeCCCcceeEEEEEEE---cCCCccccccCCCCCCCCCcEEEEEEeecCCCCC---EEEEEeCC-EecCCCCCe
Q psy11132 81 NYSCTVRNMVAEDTQVQRLIVN---VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL---TIRWLKDG-KPLSPRFPV 153 (243)
Q Consensus 81 ~Y~C~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~---~~~W~~~~-~~~~~~~~~ 153 (243)
.|+|.+.+..+.....+.+.+. ..|.+....+....+..|+.+.|.|.+.+..|.+ .+.|++++ ..+......
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~ 165 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRK 165 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCE
T ss_pred cEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCC
Confidence 9999999876544332221011 1122211111112356799999999995445555 99999975 443322211
Q ss_pred eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEee-cCCCCCeeeeec-------cceeeeccCc
Q psy11132 154 NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGN-LNRLPPSYTLVF-------SQASYMSTSY 222 (243)
Q Consensus 154 ~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~-~~~~~p~~~~~~-------~~~~~~~~~~ 222 (243)
.....++ ..+.|.|.++..+|+|.|+|.|.|..+.... .+.|... ....+|.+.+.+ ++.+.+.|..
T Consensus 166 ~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~--~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~ 243 (323)
T 2wqr_A 166 EEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRAL--MRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 243 (323)
T ss_dssp EEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE--EEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEE
T ss_pred CccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCe--eeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEe
Confidence 1101111 2457999999999999999999998753322 3333211 112455544321 6788999988
Q ss_pred ccc-c---ccceEEeCCee
Q psy11132 223 YSF-E---QDSWMIDNENY 237 (243)
Q Consensus 223 ~~~-~---~~~W~~~~~~~ 237 (243)
..+ + .+.|++||+.+
T Consensus 244 ~g~~p~~~~v~W~k~g~~l 262 (323)
T 2wqr_A 244 QNFMPEDISVQWLHNEVQL 262 (323)
T ss_dssp EEEBSSCCEEEEEETTEEC
T ss_pred eeeeCCCcEEEEEECCEEC
Confidence 663 2 69999998754
No 125
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=6.6e-25 Score=172.27 Aligned_cols=226 Identities=14% Similarity=0.162 Sum_probs=141.9
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecC--CCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDN--SAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
+|.+........+.+|+.+.|.|.+.+..|.+ .+.|++++..+.. .........-...+.|.|.+++.+| |.|+|.
T Consensus 123 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~ 201 (444)
T 1igt_B 123 APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCN 201 (444)
T ss_dssp CCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEE
T ss_pred CCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEE
Confidence 45444333333457899999999997545665 9999999875321 0111000000113579999999899 999999
Q ss_pred EEeCCCcceeEEEEEEE------------------cCCCccccccCCCC-CCCCCcEEEEEEeecCC---C-CCEEEEEe
Q psy11132 86 VRNMVAEDTQVQRLIVN------------------VPPKIESFAFPFDG-LPEGARTRVICGVTHGD---P-PLTIRWLK 142 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~------------------~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~---p-~~~~~W~~ 142 (243)
+.|..+.......+.+. .+|.+...++.... +..|+.+.|.|.+. |. | .+.+.|++
T Consensus 202 a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~-g~~~~p~~~~v~W~k 280 (444)
T 1igt_B 202 VAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVV-DVSEDDPDVQISWFV 280 (444)
T ss_dssp EEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEE-EECTTCCCCEEEEEE
T ss_pred EEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEe-ecccCCCCeEEEEEE
Confidence 99988865433333221 12222121111111 47899999999996 55 3 46999999
Q ss_pred CCEecCCCCCeeEEee-c---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeec------
Q psy11132 143 DGKPLSPRFPVNVSDL-D---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVF------ 212 (243)
Q Consensus 143 ~~~~~~~~~~~~~~~~-~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~------ 212 (243)
++..+........... + ...+.|.|.++..+|+|.|+|.|.|..|.......+.+. .....+|.+.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~ 359 (444)
T 1igt_B 281 NNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKP-KGSVRAPQVYVLPPPEEEM 359 (444)
T ss_dssp TTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECC-CCCCBCCEEEEECCCGGGT
T ss_pred CCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEecc-CCCCCCCEEEEeCCChHHc
Confidence 9988764432211111 1 124679999999999999999999998866333333220 0122566655432
Q ss_pred -cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 213 -SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 213 -~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
+..+.+.|...++ | .++|+++|..+
T Consensus 360 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l 389 (444)
T 1igt_B 360 TKKQVTLTCMVTDFMPEDIYVEWTNNGKTE 389 (444)
T ss_dssp TSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred cCCeEEEEEEEEeeeCCCCEEEEEECCEEc
Confidence 2357899988763 3 79999998654
No 126
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.92 E-value=2.6e-24 Score=157.30 Aligned_cols=168 Identities=20% Similarity=0.187 Sum_probs=127.1
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+.|.+..+|... .+....+.+|+.+.|.|.+..+.|.+.+.|++++..+... .....|.|.+++.+|.|.
T Consensus 76 ~~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~---------~~~~~l~i~~~~~~d~G~ 145 (262)
T 3rjd_A 76 IQLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF---------HWNSNLTILKTNISHNGT 145 (262)
T ss_dssp EEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE---------EECCCEEESSCCGGGCEE
T ss_pred EEEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc---------CCCCeEEEEECChhhCEE
Confidence 456666665333 3445668899999999999667788899999999877432 125679999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCcc-ccccCCCCCCCCCcEEEEEEeecCCCC-C----EEEEEeCCEecCCCCCeeE
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKIE-SFAFPFDGLPEGARTRVICGVTHGDPP-L----TIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~-~----~~~W~~~~~~~~~~~~~~~ 155 (243)
|+|.+.+..+..+..+.|.|...+..+ ........+..|+.+.|.|.+ .+.|. + .+.|++++..+...
T Consensus 146 Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~-~~~p~~p~~~~~~~w~~~~~~~~~~----- 219 (262)
T 3rjd_A 146 YHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCET-KLLLQRPGLQLYFSFYMGSKTLRGR----- 219 (262)
T ss_dssp EEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEEC-CCCCC-----EEEEEEETTEEEEEE-----
T ss_pred EEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEc-ccCCCCCCccEEEEEEeCCcEeccc-----
Confidence 999999988777778888888642211 111223457789999999999 57664 4 47899999876521
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
.....|.|.++..+|+|.|+|.|.|..|..
T Consensus 220 ----~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 220 ----NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ----ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ----CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 124679999999999999999999999965
No 127
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=8.3e-24 Score=153.70 Aligned_cols=188 Identities=15% Similarity=0.197 Sum_probs=124.1
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
+..+|.+...+. ..+.+|++++|.|.+. + +.+.+.|+|++..+.................|.|.+++.+|+|.|+|.
T Consensus 4 ~~~kP~i~~~P~-~~V~~G~~VtL~C~~~-~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 80 (257)
T 1b6u_A 4 VHRKPSLLAHPG-PLVKSEETVILQCWSD-V-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCY 80 (257)
T ss_dssp -CCCCEECCBSC-SEEESSCCEEEEEEES-S-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred cCCCCEEEEcCC-CEecCCCCEEEEEecC-C-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence 345677776664 6688999999999984 3 456899999987543211000000112257899999999999999999
Q ss_pred EEeCC-----CcceeEEEEEEEcCCCcc-ccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeec
Q psy11132 86 VRNMV-----AEDTQVQRLIVNVPPKIE-SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD 159 (243)
Q Consensus 86 ~~~~~-----~~~~~~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~ 159 (243)
+.+.. ...+..+.|.|...+..+ ....+...+.+|++++|.|.+ .+. ++.+.|+|+|..+............
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~-~~~-~~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSS-RSS-YDMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEEC-SSC-CSEEEEEETTSSCEECCBCBCCSSS
T ss_pred EeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeC-CCC-CcEEEEEECCcccCcccccccccCC
Confidence 98642 124566778887542211 111222467899999999998 454 4799999999866432211111111
Q ss_pred cceeEEEEeecCCCCCeeEEEEEEccCc-----ceeeeEEEEEEee
Q psy11132 160 SFSSLLSINSVSAAHSGEYTCVASNTAA-----QARYSSKLQVKGN 200 (243)
Q Consensus 160 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g-----~~~~~~~l~v~~~ 200 (243)
.....|.|.+++ |+|.|+|.|.+... ..+..+.|.|.+.
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~ 202 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN 202 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC
T ss_pred ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEecc
Confidence 235789999998 99999999997532 2344577777743
No 128
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.92 E-value=6.6e-25 Score=152.24 Aligned_cols=161 Identities=16% Similarity=0.216 Sum_probs=119.6
Q ss_pred CcccccCCeEEEEEEeeCCCCCceeEEEECCee--ecC------------CCceEEEEe--eeeceEEEEeecCCCCCee
Q psy11132 18 ERTLNVGERASLICSITKGDIPLTIKWLKDGRY--LDN------------SAALSITHV--DQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~--~~~------------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~ 81 (243)
.+.+.+|+++.|.|.+. +.+.+.+.|++++.. +.. ..+...... ..+...|.|.+++.+|+|.
T Consensus 4 ~v~~~~G~~v~L~C~~~-~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTAS-QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp EEEEETTSCEEECCBCS-SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred cEEEeCCCCEEEEEEEc-CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 45688999999999985 777789999999863 211 111111110 1124569999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccc
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSF 161 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~ 161 (243)
|+|.+.+..+ .+.|.|...+ . .....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ..
T Consensus 83 Y~C~~~~~~~----~~~l~V~~~~---~--~~~~~v~~g~~~~l~C~~-~~~p~~~v~W~~~~~~~~-----------~~ 141 (184)
T 2ny1_B 83 YICEVEDQKE----EVQLLVFGLT---A--NSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKNI-----------QG 141 (184)
T ss_dssp EEEEETTEEE----EEEEEEEEEE---E--SSCSEEETTCCEEEEEEC-CTTCCCEEEEECTTSCEE-----------EE
T ss_pred EEEEEEcCCC----cEEEEEEEec---C--CCCceeecCCCEEEEEEc-CCCCCCEEEEEeCCCccc-----------cC
Confidence 9999987643 4455555311 1 122456789999999999 578999999999876541 12
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEee
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGN 200 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~ 200 (243)
...|.|.++..+|+|.|+|.|.|..+.....+.|.|.+.
T Consensus 142 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~ 180 (184)
T 2ny1_B 142 GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF 180 (184)
T ss_dssp SSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEec
Confidence 467999999999999999999999999999999998843
No 129
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.92 E-value=2.2e-24 Score=149.74 Aligned_cols=145 Identities=21% Similarity=0.390 Sum_probs=109.0
Q ss_pred ccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEee-cCCCCCeeEEEEEEeCCCcceeEEE
Q psy11132 20 TLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDS-VSARHSGNYSCTVRNMVAEDTQVQR 98 (243)
Q Consensus 20 ~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~ 98 (243)
...+|+++.|.|.+. + +. .+.|+|+|..+.... +..|.|.+ ++.+|+|.|+|.+.|..+.....+.
T Consensus 10 v~~~G~~v~L~C~~~-~-~~-~i~W~k~g~~l~~~~----------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 76 (186)
T 1jbj_A 10 VSISGTSVELTCPLD-S-DE-NLKWEKNGQELPQKH----------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLK 76 (186)
T ss_dssp EEEETTEEEEECSSC-C-CT-TCEEEETTEEECSCC----------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEEC
T ss_pred EEeCCcEEEEEEeCC-C-CC-ceEEEECCEECCCCC----------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEE
Confidence 356799999999985 4 33 499999999887641 45799999 9999999999999998887555555
Q ss_pred EEEEcCCCccc------------------cccC------CCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCee
Q psy11132 99 LIVNVPPKIES------------------FAFP------FDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVN 154 (243)
Q Consensus 99 l~v~~~p~~~~------------------~~~~------~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~ 154 (243)
+.|...+.... .... ...+..|+++.|.|.+ |.+.+.|+++|..+.....
T Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~----p~p~i~W~k~g~~i~~~~~-- 150 (186)
T 1jbj_A 77 ARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL----TDKTIKWLKDGSIISPLNA-- 150 (186)
T ss_dssp CCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS----SCSCEEEEETTEECCCSSC--
T ss_pred EEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC----CCCeEEEEECCEECcccCC--
Confidence 54433211110 0000 0123489999999976 7789999999999874321
Q ss_pred EEeeccceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 155 VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 155 ~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 ------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 ------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 24679999999999999999999998865
No 130
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.92 E-value=5.8e-25 Score=183.46 Aligned_cols=206 Identities=21% Similarity=0.401 Sum_probs=64.0
Q ss_pred CcccccCCeEEEEEEeeCC-CCCceeEEEECCeeecCCCceEEE-------EeeeeceEEEEeecCCCCCeeEEEEEEeC
Q psy11132 18 ERTLNVGERASLICSITKG-DIPLTIKWLKDGRYLDNSAALSIT-------HVDQYNSMLVIDSVSARHSGNYSCTVRNM 89 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~~~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 89 (243)
...+.+|+.++|.|.+.+. .+.+.+.|++++..+......... ........|.|.+++.+|+|.|+|.+.+.
T Consensus 233 ~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 312 (772)
T 3v2a_R 233 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 312 (772)
T ss_dssp CEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECS
T ss_pred ceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcC
Confidence 3678999999999999633 455689999998876543322111 11223578999999999999999999998
Q ss_pred CCcceeEEEEEEEcCCCccccc--cCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEE
Q psy11132 90 VAEDTQVQRLIVNVPPKIESFA--FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSI 167 (243)
Q Consensus 90 ~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i 167 (243)
.+..+..+.|.|..+|.+.... .....+..|+.+.|.|.+ .+.|.+.+.|+++|..+....... ....|.|
T Consensus 313 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~g~~l~~~~~~~------~~~~L~i 385 (772)
T 3v2a_R 313 LMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKY-LGYPPPEIKWYKNGIPLESNHTIK------AGHVLTI 385 (772)
T ss_dssp SCEEEEEEEEEEECCCC---------------------------------------------------------------
T ss_pred CcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEE-eeeCCCeEEEEECCEeCCCCceEc------cceeEEE
Confidence 8888888899998887665432 122557889999999999 588999999999998877532211 2477999
Q ss_pred eecCCCCCeeEEEEEEccCccee--eeEEEEEEeecCCCCCee----------eeeccceeeeccCccccc--c-cceEE
Q psy11132 168 NSVSAAHSGEYTCVASNTAAQAR--YSSKLQVKGNLNRLPPSY----------TLVFSQASYMSTSYYSFE--Q-DSWMI 232 (243)
Q Consensus 168 ~~~~~~d~g~y~C~~~n~~g~~~--~~~~l~v~~~~~~~~p~~----------~~~~~~~~~~~~~~~~~~--~-~~W~~ 232 (243)
.++..+|+|.|+|.|.|..|... ..+.+.|. .||.+ .+..++.+.+.|.....+ . +.|++
T Consensus 386 ~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~-----~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~ 460 (772)
T 3v2a_R 386 MEVSERDTGNYTVILTNPISKEKQSHVVSLVVY-----VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYW 460 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCChhcCceEEEEEEECCcCeEEEEEEEEEEe-----cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEE
Confidence 99999999999999999988654 34555555 33332 245677888999877654 4 99999
Q ss_pred eCC
Q psy11132 233 DNE 235 (243)
Q Consensus 233 ~~~ 235 (243)
++.
T Consensus 461 ~~~ 463 (772)
T 3v2a_R 461 QLE 463 (772)
T ss_dssp ---
T ss_pred cCC
Confidence 743
No 131
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.91 E-value=1.5e-23 Score=150.44 Aligned_cols=169 Identities=19% Similarity=0.322 Sum_probs=118.3
Q ss_pred CCCcccccCCeEEEEEEeeCCCCC-ceeEEEECCeeec---------CCCceEEEEe----------eeeceEEEEeecC
Q psy11132 16 NPERTLNVGERASLICSITKGDIP-LTIKWLKDGRYLD---------NSAALSITHV----------DQYNSMLVIDSVS 75 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~-~~v~W~~~~~~~~---------~~~~~~~~~~----------~~~~~~l~i~~~~ 75 (243)
+....+.+|+.+.|.|.+. +.+. +.+.|++++.... ....+..... ......|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPT-GTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CSEEEEETTCCEEECCCCB-SCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCcEEEEcCCCEEEecccC-CCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 5567789999999999995 6663 7999998654321 0010111111 1113459999999
Q ss_pred CCCCeeEEEEEEeCC-CcceeEEEEEEEcCCCcccccc--CCCCCCCCCcE-EEEEEeecCCCCCEEEEEeCCEecCCCC
Q psy11132 76 ARHSGNYSCTVRNMV-AEDTQVQRLIVNVPPKIESFAF--PFDGLPEGART-RVICGVTHGDPPLTIRWLKDGKPLSPRF 151 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~p~~~~~~~--~~~~~~~g~~~-~l~C~~~~~~p~~~~~W~~~~~~~~~~~ 151 (243)
.+|+|.|+|.+.+.. +.....+.|.|..+|..+.... ....+..|+.+ .|.|.+..+.|.+.+.|++++..+....
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 999999999999887 6677888899988776543322 22346688888 9999995688999999999999887654
Q ss_pred ----CeeEEee---cc-----ceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 152 ----PVNVSDL---DS-----FSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 152 ----~~~~~~~---~~-----~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
....... .. ..+.|.|.....+|.|.|+|.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 166 EMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 2222111 00 0256888755555699999999994
No 132
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.91 E-value=2.9e-24 Score=152.22 Aligned_cols=176 Identities=14% Similarity=0.234 Sum_probs=120.3
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceeec------------CCCceEEEEeeeeceEEEEeecCCC
Q psy11132 12 LSPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLD------------NSAALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+...+ ...+.+|++++|.|.+. +.+.+.|+++ +..+. ...++.... .....+|.|.+++.+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~ 78 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT---SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-SGNTASLTVSGLQTD 78 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC---CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEEESCCGG
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC---CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-cCCEEEEEECCCChh
Confidence 33344 67789999999999984 7779999994 22211 123444333 233578999999999
Q ss_pred CCeeEEEEEEeCCC--cceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCC-CCCEEEEEeCCEecCCC
Q psy11132 78 HSGNYSCTVRNMVA--EDTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGD-PPLTIRWLKDGKPLSPR 150 (243)
Q Consensus 78 d~G~Y~C~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~~~~~~~~ 150 (243)
|+|.|+|.+.+..+ .......|.|. .+|.+...+.. ..+..|+.+.|.|.+.+.. |.+.+.|+++|..+...
T Consensus 79 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 157 (211)
T 3tv3_L 79 DEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPS-SEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAG 157 (211)
T ss_dssp GCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCC-HHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred HCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCc-hhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCC
Confidence 99999999999876 34555677777 34444333222 2233699999999995333 36899999999988653
Q ss_pred CCeeE--Eeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 151 FPVNV--SDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 151 ~~~~~--~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..... ...++ ..+.|.|..+..+|+|.|+|.|.|..+....++
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 158 VETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred cccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 21111 11111 135688888888899999999999887665554
No 133
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.91 E-value=7.1e-24 Score=149.07 Aligned_cols=174 Identities=18% Similarity=0.259 Sum_probs=118.2
Q ss_pred CcccccCCeEEEEEEeeCC---CCCceeEEEECCeeecC------------CCceEEEEeeeeceEEEEeecCCCCCeeE
Q psy11132 18 ERTLNVGERASLICSITKG---DIPLTIKWLKDGRYLDN------------SAALSITHVDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~---~~~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 82 (243)
.+.+.+|+++.|.|.+... .+.+.+.|++++..+.. ..+..+. .....+|.|.+++.+|+|.|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~--~~~~~~L~I~~v~~~D~G~Y 80 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD--ITNNLSIVILALRPSDEGTY 80 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE--STTTTEEEECSCCGGGCEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc--cCCCcEEEEecccchhCeEE
Confidence 3568899999999998522 24568999999887621 1122211 12256899999999999999
Q ss_pred EEEEEeCCCcc-----eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEe
Q psy11132 83 SCTVRNMVAED-----TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 83 ~C~~~~~~~~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~ 157 (243)
+|.+.+..+.. ...+.|.|..++..+.... .....|+.+.|.|.+..|.|.|.+.|+++|..+..........
T Consensus 81 ~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~--~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 81 ECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD--FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE--EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEEEEcCCCCccccccccEEEEEEcCCCCCCceEe--ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 99999976643 3466777766533222111 1124588999999996589999999999998887543222221
Q ss_pred ec-cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 158 LD-SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 158 ~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
.. .......+..+..+|.|.|+|.|.|..|.....+.+
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 11 111222334556789999999999999987766554
No 134
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.91 E-value=1.9e-24 Score=154.29 Aligned_cols=180 Identities=21% Similarity=0.305 Sum_probs=122.0
Q ss_pred CCcccccCCeEEEEEEeeCCCCC-----ceeEEEECCeeec-------------CCCceEEEE--eeeeceEEEEeecCC
Q psy11132 17 PERTLNVGERASLICSITKGDIP-----LTIKWLKDGRYLD-------------NSAALSITH--VDQYNSMLVIDSVSA 76 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~-----~~v~W~~~~~~~~-------------~~~~~~~~~--~~~~~~~l~i~~~~~ 76 (243)
+.+.+.+|++++|.|.+. +.+. +.+.|++++.... ...+..+.. ......+|.|.+++.
T Consensus 3 ~~v~~~~G~~v~L~C~~~-~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFS-PEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCCTTSCEEECCBCC-CCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG
T ss_pred CCEEEECCCCeEEEEEec-CCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc
Confidence 346688999999999985 4432 6899999874320 011111110 011256799999999
Q ss_pred CCCeeEEEEEEeCCCcceeEEEEEEEcCCCcccc-ccCCCCCCCCCcEEEEEEeecCCCCCEEEEEe-CCEecCCCCCee
Q psy11132 77 RHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESF-AFPFDGLPEGARTRVICGVTHGDPPLTIRWLK-DGKPLSPRFPVN 154 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~~~~~~~~~~~~ 154 (243)
+|+|.|+|.+.+. +..+..+.|.|..++..+.. ......+..|+.+.|.|.+..+.|.+.+.|++ ++..+.......
T Consensus 82 ~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~ 160 (222)
T 4i0k_A 82 TDEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS 160 (222)
T ss_dssp GGCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEE
T ss_pred ccCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCccee
Confidence 9999999999975 34445556666655332221 12224567899999999996688999999999 455544322222
Q ss_pred EEe-eccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 155 VSD-LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 155 ~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
... ..+....|.|.++..+|.|.|+|.|.|..|....++.|.|.
T Consensus 161 ~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 161 QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp EEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred EEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence 211 22223568899999999999999999999999999999988
No 135
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.91 E-value=4.7e-23 Score=148.62 Aligned_cols=179 Identities=17% Similarity=0.262 Sum_probs=125.8
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..+|.+...+.. .+.+|++++|.|.+. + +...+.|+|++..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~-~-~~~~~~w~k~g~~~~~~~~~--~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGN-Y-GAVEYQLHFEGSLFAVDRPK--PPERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECC-T-TCCEEEEEETTEEEEEECCS--SCTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeC-C-CCcEEEEEECCCcccccccc--ccCCcceeEEEecCCCcccCeEEEEEE
Confidence 456777766655 789999999999984 3 44589999999876421000 001112567999999999999999999
Q ss_pred EeCCC--cceeEEEEEEEcC---CCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccc
Q psy11132 87 RNMVA--EDTQVQRLIVNVP---PKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSF 161 (243)
Q Consensus 87 ~~~~~--~~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~ 161 (243)
.+..+ ..+..+.|.|... |.+.. .+...+.+|++++|.|.+ .+ +.+.+.|+|+|..+... ......
T Consensus 80 ~~~~~~s~~S~~~~L~V~~~~~~P~i~~--~p~~~v~~G~~vtL~C~~-~~-~~~~~~w~k~g~~~~~~-----~~~~~~ 150 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTEMYDTPTLSV--HPGPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSHVQ-----RGYGKV 150 (242)
T ss_dssp EETTEECCCCCCEEEEEECCSCCCEEEE--ESCSEEETTCEEEEEEEC-TT-SCSEEEEEECSSSCEEE-----EEECSS
T ss_pred ecCCccccCCcceEEEeecccCCCceEc--cCCCccCCCCcEEEEEec-CC-CCCEEEEEECCCccCcc-----ccCCCc
Confidence 87543 2456677887752 33322 222456789999999998 34 35699999998765431 112234
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccC---cceeeeEEEEEEe
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTA---AQARYSSKLQVKG 199 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~---g~~~~~~~l~v~~ 199 (243)
...|.|.+++.+|+|.|+|.+.|.. ...+..+.|.|.+
T Consensus 151 ~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 151 QAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp EEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred eEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 6789999999999999999999874 2334567777774
No 136
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.91 E-value=7.3e-24 Score=150.85 Aligned_cols=180 Identities=17% Similarity=0.311 Sum_probs=117.2
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCC-CCceeEEEECC--ee-------------ec---CCCceEEEEeeeeceEEE
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGD-IPLTIKWLKDG--RY-------------LD---NSAALSITHVDQYNSMLV 70 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~v~W~~~~--~~-------------~~---~~~~~~~~~~~~~~~~l~ 70 (243)
|.+...+ ...+.+|++++|.|.+. +. +.+.+.|+|.. .. .. ...++.+.. .....+|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~ 78 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLN-SQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLS 78 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEEC-GGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-ETTEEEEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECC-CCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-CCceEEEE
Confidence 3444445 67789999999999995 55 77899999832 11 00 012343332 23357899
Q ss_pred EeecCCCCCeeEEEEEEeCCC-----cceeEEEEEEEcC----CCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEE
Q psy11132 71 IDSVSARHSGNYSCTVRNMVA-----EDTQVQRLIVNVP----PKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRW 140 (243)
Q Consensus 71 i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W 140 (243)
|.+++.+|+|.|.|.+.+..+ .......|.|... |.+...... .....|+.+.|.|.+.++.|++ .+.|
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~-~~~~~~~~v~L~C~~~g~~p~~~~v~W 157 (218)
T 3s96_B 79 ISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPS-SEELKENKATLVCLISNFSPSGVTVAW 157 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEE
T ss_pred EccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCC-cccccCCcEEEEEEECcccCCCeEEEE
Confidence 999999999999999998765 2344567788743 333322211 2234578999999996446666 9999
Q ss_pred EeCCEecCCCCCee--EEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 141 LKDGKPLSPRFPVN--VSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 141 ~~~~~~~~~~~~~~--~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
+++|..+....... ..... ...+.|.|.....+|+|.|+|.|.|..+....++
T Consensus 158 ~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 158 KANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred EECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 99999887532111 01111 1124588888888889999999999987665443
No 137
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.91 E-value=5.2e-24 Score=151.08 Aligned_cols=171 Identities=20% Similarity=0.281 Sum_probs=116.5
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee----------c--CCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL----------D--NSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~----------~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+....+.+|+++.|.|.+. +.+.+.+.|++++ ..+ . ...++.... ......|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRAS-QSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp CSEEEECTTCCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGGCEE
T ss_pred CccEEEeCCCcEEEEEECC-CCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-CCCEEEEEECCCChhhCEE
Confidence 4566789999999999985 6677789999853 211 1 113444332 2234689999999999999
Q ss_pred EEEEEEeCCCcc-eeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCC-CCee-
Q psy11132 82 YSCTVRNMVAED-TQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPR-FPVN- 154 (243)
Q Consensus 82 Y~C~~~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~-~~~~- 154 (243)
|+|.+.+..+.. .....|.|.. +|.+...... .....|+.+.|.|.+.++.|++ .+.|+++|..+... ....
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 164 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWT 164 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEEC
T ss_pred EEEeeecCCcceeCCCEEEEEecCCCCceeEeECCC-hhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCC
Confidence 999999876642 2334666654 3433332221 2233688999999996436655 89999999988755 1100
Q ss_pred EEe-ecc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 155 VSD-LDS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 155 ~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
... .++ ..+.|.|.++..+|+|.|+|.|.|.....
T Consensus 165 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 165 DQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 000 010 13589999999999999999999987654
No 138
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.91 E-value=1.9e-23 Score=147.94 Aligned_cols=171 Identities=20% Similarity=0.313 Sum_probs=115.6
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee------------cCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL------------DNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+....+.+|++++|.|.+. +.+.+.+.|++++ ..+ ....++.... ......|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~ 84 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKAS-ESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-SGTDFTLTIDPVEADDTAI 84 (210)
T ss_dssp CSEEEECTTSCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEE
T ss_pred CCcEEEcCCCCEEEEeeCC-CccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-cCCEEEEEECCCCHHHCeE
Confidence 5567789999999999985 6667789999842 221 1123444332 2234689999999999999
Q ss_pred EEEEEEeCCCcc-eeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCC-CCe-e
Q psy11132 82 YSCTVRNMVAED-TQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPR-FPV-N 154 (243)
Q Consensus 82 Y~C~~~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~-~~~-~ 154 (243)
|.|.+.+..+.. .....|.|.. +|.+...... ..+..|+.+.|.|.+.+..|+ +.+.|+++|..+... ... .
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 163 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS-TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVT 163 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEEC
T ss_pred EEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCc-hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccC
Confidence 999999876542 2334666654 3333332221 223479999999999544555 499999999988755 111 0
Q ss_pred EEe-ec---cceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 155 VSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 155 ~~~-~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
... .+ ...+.|.|..+..+|+|.|+|.|.|.....
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 164 DQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 000 11 113579999999999999999999987644
No 139
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.91 E-value=3.6e-23 Score=155.46 Aligned_cols=189 Identities=19% Similarity=0.212 Sum_probs=119.9
Q ss_pred eEEEec---CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 3 VIFSTV---PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 3 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
.|.+.. +|.+...+... +.+|+.++|.|.+. .+++.+.|++++..+.................|.|.+++.+|+
T Consensus 110 ~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 186 (316)
T 3vh8_G 110 VIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD--IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALA 186 (316)
T ss_dssp EEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES--SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGC
T ss_pred EEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC--CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhC
Confidence 455543 34555444433 88999999999983 3455899999998765432211111122357899999999999
Q ss_pred eeEEEEEEeCCCc-----ceeEEEEEEEcCCCcc-ccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe
Q psy11132 80 GNYSCTVRNMVAE-----DTQVQRLIVNVPPKIE-SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 80 G~Y~C~~~~~~~~-----~~~~~~l~v~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~ 153 (243)
|.|+|.+.|..+. .+..+.|.|...+..+ ....+...+.+|+.+.|.|.+ . .|.+.+.|+++|..+......
T Consensus 187 G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~-~-~~~~~~~W~k~g~~~~~~~~~ 264 (316)
T 3vh8_G 187 GTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSS-R-SSYDMYHLSREGGAHERRLPA 264 (316)
T ss_dssp EEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEE-S-SCCSEEEEEETTSSCCEEEEC
T ss_pred ceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEEC-C-CCCcEEEEEECCCcCCCceec
Confidence 9999999988763 2556677776532221 111222467889999999998 3 477899999999876532111
Q ss_pred eEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc-----eeeeEEEEEE
Q psy11132 154 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-----ARYSSKLQVK 198 (243)
Q Consensus 154 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-----~~~~~~l~v~ 198 (243)
...........|.|.+++ |+|.|+|.|.|..+. .+..+.|.|.
T Consensus 265 ~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 312 (316)
T 3vh8_G 265 VRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVT 312 (316)
T ss_dssp EECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC---
T ss_pred eeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEe
Confidence 111112224689999998 999999999997653 3445666666
No 140
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.91 E-value=8.4e-24 Score=150.03 Aligned_cols=171 Identities=17% Similarity=0.263 Sum_probs=116.1
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee---c---------CCCceEEEEeeeeceEEEEeecC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL---D---------NSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~---~---------~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
|.+...+....+.+|++++|.|.+. +.+.+.+.|+|++ ..+ . ...++.... .....+|.|.+++
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 79 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQAS-QSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG-SGTDFTLTISDLE 79 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCC
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEec-CCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec-CCCEEEEEECCCC
Confidence 3444445667899999999999995 6678899999842 111 0 123444332 2235689999999
Q ss_pred CCCCeeEEEEEEeCCC---cceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCC
Q psy11132 76 ARHSGNYSCTVRNMVA---EDTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 149 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~ 149 (243)
.+|+|.|+|.+.+..+ .......|.|.. +|.+...... ..+..|+.+.|.|.+..+.|.+.+.|+++|..+..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 80 CADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPS-ADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp GGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCC-HHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCS
T ss_pred hHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCc-hhhccCCcEeEEEEEecccCCcEEEEEeCCccCCC
Confidence 9999999999998765 233445666644 2322221211 23456999999999964488999999999998864
Q ss_pred CCCeeE--Ee-ec---cceeEEEEeecCCCCCeeEEEEEE
Q psy11132 150 RFPVNV--SD-LD---SFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 150 ~~~~~~--~~-~~---~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
...... .. .+ ...+.|.|..+..+|+|.|+|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 159 GIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp SEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 320000 00 00 113679999999999999999999
No 141
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.91 E-value=6.5e-24 Score=155.78 Aligned_cols=184 Identities=19% Similarity=0.317 Sum_probs=120.6
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeC--CCCCceeEEEECCeeecCC------------------CceEEEE-eeeece
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITK--GDIPLTIKWLKDGRYLDNS------------------AALSITH-VDQYNS 67 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~--~~~~~~v~W~~~~~~~~~~------------------~~~~~~~-~~~~~~ 67 (243)
.+.+...+....+.+|+++.|.|.+.. +.+.+.+.|++++...... .+..+.. ....+.
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 455666677788999999999999841 4566789999965432111 1221110 011237
Q ss_pred EEEEeecCCCCCeeEEEEEEeCCCcc--eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEee--cCCCCCEEEEEeC
Q psy11132 68 MLVIDSVSARHSGNYSCTVRNMVAED--TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVT--HGDPPLTIRWLKD 143 (243)
Q Consensus 68 ~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~--~~~p~~~~~W~~~ 143 (243)
+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|. +..+ ....+..|+.+.|.|.+. .+.|.+.+.|+++
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~~p----~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--PEEP----RDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--CCCC----SEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--ccCC----CccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 79999999999999999999876544 334455543 2211 124567899999999983 4668899999984
Q ss_pred -CEecCCCC---------------------CeeEE-eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 144 -GKPLSPRF---------------------PVNVS-DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 144 -~~~~~~~~---------------------~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+....... +.... ........|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 159 SGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp CTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 32111100 00000 001235689999999999999999999999988888888885
No 142
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.90 E-value=8.9e-24 Score=150.77 Aligned_cols=181 Identities=16% Similarity=0.222 Sum_probs=124.3
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCc----eeEEEECCeeecC-------------CCceEEEEe----eeeceEEEEeec
Q psy11132 16 NPERTLNVGERASLICSITKGDIPL----TIKWLKDGRYLDN-------------SAALSITHV----DQYNSMLVIDSV 74 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~----~v~W~~~~~~~~~-------------~~~~~~~~~----~~~~~~l~i~~~ 74 (243)
+..+.+.+|+++.|.|.+..+.+.+ .+.|++++..... ..+..+... .....+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 3456688999999999985334433 4999998642210 223332220 113568999999
Q ss_pred CCCCCeeEEEEEEeCC-CcceeEEEEEEEcCCCccccccCCCCCCCCCcE-EEEEEeecCCCCCEEEEEeCCEecCCCCC
Q psy11132 75 SARHSGNYSCTVRNMV-AEDTQVQRLIVNVPPKIESFAFPFDGLPEGART-RVICGVTHGDPPLTIRWLKDGKPLSPRFP 152 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~~~~p~~~~~W~~~~~~~~~~~~ 152 (243)
+.+|+|.|+|.+.+.. +.....+.|.|..+|.+...... .. ..|+.+ .|.|.+..+.|.+.++|++++........
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~-~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQK-VQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEEC-CC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCC-cc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccce
Confidence 9999999999999876 66677778888887777654433 22 678888 59999866899999999987544332111
Q ss_pred eeEE--eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 153 VNVS--DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 153 ~~~~--~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.... ......+.|.|..+..+|+|.|+|.|.|..+.....+.+...
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCC
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEE
Confidence 1000 111224679999999999999999999998776655555433
No 143
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.90 E-value=3.2e-23 Score=163.31 Aligned_cols=218 Identities=16% Similarity=0.235 Sum_probs=138.5
Q ss_pred CCcccccCCeEEEEEEeeCCCC--CceeEEEEC--Cee---e--------------cCCCceEEEEee-eeceEEEEeec
Q psy11132 17 PERTLNVGERASLICSITKGDI--PLTIKWLKD--GRY---L--------------DNSAALSITHVD-QYNSMLVIDSV 74 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~--~~~---~--------------~~~~~~~~~~~~-~~~~~l~i~~~ 74 (243)
....+.+|++++|.|.+. +.+ .+.+.|+|+ +.. + ....++.+.... .....|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 8 GAEVKKPGASVKVSCQAS-GYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCEEECTTCCEEECEEEE-SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CceEEcCCCCEEEEEEec-CccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 345688999999999996 544 568999984 221 1 012344433221 23468999999
Q ss_pred CCCCCeeEEEEEEeCCC------------cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CE
Q psy11132 75 SARHSGNYSCTVRNMVA------------EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LT 137 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~ 137 (243)
+.+|+|.|+|.+.+..+ .......|.|.. +|.+..... ...+..|+.+.|.|.+.+..|. +.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVT 165 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECC-CSCCCTTCCEEEEEEEESBBSCCCE
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCc-cccccCCCcEEEEEEEeEEeCCCeE
Confidence 99999999999998754 122445677764 233322222 2446789999999999643464 89
Q ss_pred EEEEeCCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeec------------C
Q psy11132 138 IRWLKDGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNL------------N 202 (243)
Q Consensus 138 ~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~------------~ 202 (243)
+.|++++..+...........++ ..+.|.|..+..+| |.|+|.|.|..+.......+.+.... .
T Consensus 166 v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 244 (457)
T 1hzh_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPEL 244 (457)
T ss_dssp EEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCC
T ss_pred EEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccc
Confidence 99999986543111001111111 13578999999888 99999999988765544444332110 0
Q ss_pred CCCCee-e--------eeccceeeeccCcccc-c-----ccceEEeCCee
Q psy11132 203 RLPPSY-T--------LVFSQASYMSTSYYSF-E-----QDSWMIDNENY 237 (243)
Q Consensus 203 ~~~p~~-~--------~~~~~~~~~~~~~~~~-~-----~~~W~~~~~~~ 237 (243)
..+|.+ . +..++.+.+.|..... + .+.|+++|..+
T Consensus 245 ~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~ 294 (457)
T 1hzh_H 245 LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEV 294 (457)
T ss_dssp SSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEE
T ss_pred cCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccc
Confidence 124443 1 2236678889987665 2 79999999654
No 144
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=155.00 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=127.2
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNM 89 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 89 (243)
|.+........+.+|+++.|.|.+. +. +.|++++..+.. +............|.|.+++.+|+|.|+|.+.|.
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~-~~----v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 73 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGS-AP----VVWERMSQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDS 73 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEES-SC----CEEEBTTBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-
T ss_pred CeecCCCCeEEEeCCCcEEEEEecc-ce----EEEECCCCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEccc
Confidence 5566666678899999999999984 43 999999987732 1111111122478999999999999999999988
Q ss_pred CCc---ceeEEEEEEEcCCCccccccCC---CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecccee
Q psy11132 90 VAE---DTQVQRLIVNVPPKIESFAFPF---DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSS 163 (243)
Q Consensus 90 ~~~---~~~~~~l~v~~~p~~~~~~~~~---~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 163 (243)
.+. ....+.+.|..+.......... ..+.+|+.+.|.|.+. .|.+.+.|++.+......... +....
T Consensus 74 ~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~~v~w~~~~~~~~~~~~~-----~~~~~ 146 (289)
T 3mjg_X 74 RGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT--DPQLVVTLHEKKGDVALPVPY-----DHQRG 146 (289)
T ss_dssp -----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS--CTTSCEEEEESSCCSCCCCCE-----ETTTE
T ss_pred CCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC--CCCceEEEEeCCCCCccceee-----cCCcC
Confidence 765 3344444444322221111111 3467899999999984 567788888865322211111 01111
Q ss_pred EEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEEeecCCCCCee-------eeeccceeeeccCcccc--cccceEEe
Q psy11132 164 LLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVKGNLNRLPPSY-------TLVFSQASYMSTSYYSF--EQDSWMID 233 (243)
Q Consensus 164 ~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~--~~~~W~~~ 233 (243)
.+ ...|+|.|+|.|.|..+... ..+.+.+... .+|.+ .+..++.+.+.|..... +.+.|+++
T Consensus 147 ~~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~---~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~ 218 (289)
T 3mjg_X 147 FS-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV---SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYP 218 (289)
T ss_dssp EE-----ECCCSSEEEEEEEETTEEEECCCEEEEECCC---CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECT
T ss_pred ee-----eeccCcEEEEEEEeCCceeeeeeEEEEecCC---CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcC
Confidence 11 35789999999998776543 3455665521 23333 34557777888876544 48999976
Q ss_pred CC
Q psy11132 234 NE 235 (243)
Q Consensus 234 ~~ 235 (243)
++
T Consensus 219 ~~ 220 (289)
T 3mjg_X 219 RK 220 (289)
T ss_dssp TS
T ss_pred Cc
Confidence 64
No 145
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.90 E-value=1.2e-22 Score=144.14 Aligned_cols=171 Identities=22% Similarity=0.318 Sum_probs=115.3
Q ss_pred CCCcccccCCeEEEEEEeeCC------CCCceeEEEECCeeec-----------------CCCceEEEEe-eeeceEEEE
Q psy11132 16 NPERTLNVGERASLICSITKG------DIPLTIKWLKDGRYLD-----------------NSAALSITHV-DQYNSMLVI 71 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~------~~~~~v~W~~~~~~~~-----------------~~~~~~~~~~-~~~~~~l~i 71 (243)
+..+.+.+|++++|.|.+... .+.+.+.|+|++.... ...++.+... .....+|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 455678899999999998632 1467999999865210 1123332211 122457999
Q ss_pred eecCCCCCeeEEEEEEeCCCc----ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecC----CCCCEEEEEeC
Q psy11132 72 DSVSARHSGNYSCTVRNMVAE----DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHG----DPPLTIRWLKD 143 (243)
Q Consensus 72 ~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~----~p~~~~~W~~~ 143 (243)
.+++.+|+|.|.|.+.+..+. ....+.|.|..++..+....+ ..+.+|+.+.|.|.+. + .|.+.+.|+++
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~-~~~~~G~~v~L~C~~~-~~~~~~p~p~v~W~~~ 164 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFL-EPLESGRPTRLSCSLP-GSCEAGPPLTFSWTGN 164 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---CCCCTTCCEEEEEECT-TCCSCSSCCEEEEESS
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecC-ccccCCCeEEEEEEec-cCCCCCCCceEEEeCC
Confidence 999999999999999987532 124677888775433322222 3467899999999984 5 37899999999
Q ss_pred CEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 144 GKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
+..+.... ....+.|.|..+..+|+|.|+|.|.|..+....+..+
T Consensus 165 ~~~~~~~~-------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v 209 (214)
T 2zg1_A 165 ALSPLDPE-------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209 (214)
T ss_dssp TTSSSCSS-------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEE
T ss_pred CCccCCCC-------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEE
Confidence 86543211 1235779999999999999999999987554433333
No 146
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.90 E-value=4.2e-24 Score=155.11 Aligned_cols=179 Identities=17% Similarity=0.269 Sum_probs=113.7
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCc-----eeEEEECCeeecCC--------C---------ceEEEEeeeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPL-----TIKWLKDGRYLDNS--------A---------ALSITHVDQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~-----~v~W~~~~~~~~~~--------~---------~~~~~~~~~~~~~l~i~~ 73 (243)
+....+.+|++++|.|.+. +.|.+ .+.|++++...... . ++..........+|.|.+
T Consensus 10 p~~~~v~~G~~v~L~C~~~-g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIF-YSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TSEEEEETTSCEEECCEEE-ESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCeEEeCCCCEEEeeEEe-cCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 3445688999999999995 44444 49999964322110 0 000000011235699999
Q ss_pred cCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCC
Q psy11132 74 VSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFP 152 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~ 152 (243)
++.+|+|.|+|.+.+..+.....+.|.|..+|.+...+. .....|+.+.|.|.+.++.|.+ .+.|++++..+.....
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~ 166 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD--QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIE 166 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC----------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC--CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccc
Confidence 999999999999999877777788899988887655433 3345678888999996447887 9999999865542210
Q ss_pred -------eeEEe-ecc---ceeEEEEeecCCCCCeeEEEEEEccCcceee--eEEEEE
Q psy11132 153 -------VNVSD-LDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARY--SSKLQV 197 (243)
Q Consensus 153 -------~~~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~--~~~l~v 197 (243)
..... .++ ..+.|.+.....+|.|.|+|.|.|..+.... .+.|.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 167 ISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp ECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 00111 111 1356888888889999999999999886444 455555
No 147
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.90 E-value=9.4e-24 Score=154.75 Aligned_cols=168 Identities=17% Similarity=0.247 Sum_probs=124.4
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+.|.|..+|..........+.+|+.+.|.|.+. |.+.+.| +|..+.... ....|.|..+..+|.|.
T Consensus 91 ~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~---p~~~i~W--~g~~~~~~~---------~~~~l~i~~~~~~~~g~ 156 (265)
T 2oz4_A 91 QTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PRAKVTL--NGVPAQPLG---------PRAQLLLKATPEDNGRS 156 (265)
T ss_dssp EEEEEECCCCCEEEESCSEEETTCEEEEEEECC---TTSEEEE--SSCSSSCCS---------SEECCEEECCGGGTTEE
T ss_pred EEEEEeCCCCceeecCCceecCCCcEEEEEEcc---CCCEEEE--CCEEccCCC---------CcEEEEEccccccCCce
Confidence 356666533322223456688999999999984 7789999 777663322 14568899999999999
Q ss_pred EEEEEEeCC-Ccce---eEEEEEEEcCCCcccccc-CCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE
Q psy11132 82 YSCTVRNMV-AEDT---QVQRLIVNVPPKIESFAF-PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 156 (243)
Q Consensus 82 Y~C~~~~~~-~~~~---~~~~l~v~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 156 (243)
|+|.+.+.. |... ..+.|.|..+|.+..... ....+.+|+.+.|.|.+ .|.|.+.+.|++++..+...
T Consensus 157 Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~-~g~P~p~i~W~~~~~~~~~~------ 229 (265)
T 2oz4_A 157 FSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA-WGNPLPELKCLKDGTFPLPI------ 229 (265)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCC-EEESCCEEEEEETTTEECCT------
T ss_pred EEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeEC-ccCCCCeEEEEECCcccCCC------
Confidence 999998544 5543 677888888777654432 22356789999999999 69999999999998732221
Q ss_pred eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 157 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 157 ~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..+ ..+..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 230 ------g~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 230 ------GES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp ------TSC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ------CcE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 111 2378899999999999999999999999887
No 148
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.90 E-value=6.3e-23 Score=145.41 Aligned_cols=174 Identities=17% Similarity=0.289 Sum_probs=115.3
Q ss_pred CCCcccccCCeEEEEEEeeCCCC---CceeEEEECC--eee------------cCCCceEEEEeeeeceEEEEeecCCCC
Q psy11132 16 NPERTLNVGERASLICSITKGDI---PLTIKWLKDG--RYL------------DNSAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~---~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
+....+.+|++++|.|.+. +.+ .+.+.|++++ ..+ ....++.... ......|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~-~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 84 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSS-TGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGDKAALTITGAQTED 84 (212)
T ss_dssp CSEEEECTTCCEEEEEEES-SSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred CCeEeecCCCCEEEEEEec-ccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-eCCEEEEEECCCCccC
Confidence 5566789999999999995 544 4689999863 222 1123443332 2234689999999999
Q ss_pred CeeEEEEEEeCCCc-ceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCC
Q psy11132 79 SGNYSCTVRNMVAE-DTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFP 152 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~-~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~ 152 (243)
+|.|.|.+.+..+. ......|.|. .+|.+...... .....|+.+.|.|.+.+..|+ ..+.|+++|..+.....
T Consensus 85 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 163 (212)
T 1q0x_L 85 EAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPS-SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGME 163 (212)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred CEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCC-HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCee
Confidence 99999999987653 2234456664 23333322221 223468899999999643454 39999999998865421
Q ss_pred ee--EEeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 153 VN--VSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 153 ~~--~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
.. ....+ ...+.|.|..+..+|+|.|+|.|.|......++
T Consensus 164 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 164 TTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred cCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 11 11111 123568899988999999999999987654443
No 149
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.90 E-value=2.8e-23 Score=151.28 Aligned_cols=180 Identities=18% Similarity=0.306 Sum_probs=119.0
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCC-----CceeEEEECC--eee----------c--CCCceEEEEeeeece
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDI-----PLTIKWLKDG--RYL----------D--NSAALSITHVDQYNS 67 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-----~~~v~W~~~~--~~~----------~--~~~~~~~~~~~~~~~ 67 (243)
..+|.+...+....+.+|++++|.|.+. +.+ .+.+.|+|++ ..+ . ...++.... .....
T Consensus 36 ~~~~~~~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~ 113 (254)
T 2c1o_A 36 LRELVMTQSPLTLSVTIGQPASISCKSS-QSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG-SGTDF 113 (254)
T ss_dssp --CCCEEEECSEEEECTTSCEEEEEEES-SCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEE
T ss_pred eeceeEEeCCceEEecCCCcEEEEeecc-CcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec-CCCEE
Confidence 3466666667788899999999999995 555 3799999843 221 1 123444332 22346
Q ss_pred EEEEeecCCCCCeeEEEEEEeCCCcc-eeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEe
Q psy11132 68 MLVIDSVSARHSGNYSCTVRNMVAED-TQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLK 142 (243)
Q Consensus 68 ~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~ 142 (243)
+|.|.+++.+|+|.|+|.+.+..+.. .....+.|.. +|.+...... .....|+.+.|.|.+.+..|+ +.+.|++
T Consensus 114 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k 192 (254)
T 2c1o_A 114 TLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKI 192 (254)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCC-hhhccCCcEEEEEEEecccCCCcEEEEEE
Confidence 89999999999999999998875432 2234566653 3333322221 122357899999999533554 5799999
Q ss_pred CCEecCCC-CC-eeEEe-ecc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 143 DGKPLSPR-FP-VNVSD-LDS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 143 ~~~~~~~~-~~-~~~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
+|..+... .. ..... .++ ..+.|.|.++..+|+|.|+|.|.|.....
T Consensus 193 ~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 193 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp SSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 99887654 11 10000 011 14679999999999999999999987654
No 150
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.90 E-value=2.8e-23 Score=163.07 Aligned_cols=219 Identities=18% Similarity=0.235 Sum_probs=138.3
Q ss_pred CCcccccCCeEEEEEEeeCCC-CCceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKGD-IPLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~-~~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+.+.. +.+.+.|+|+. ..+. ...++.+... .....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (444)
T 1igt_B 8 GGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLK 87 (444)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCC
Confidence 345688999999999996332 24689999853 2210 1234443322 1224689999999
Q ss_pred CCCCeeEEEEEEeCCCc---ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEec
Q psy11132 76 ARHSGNYSCTVRNMVAE---DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPL 147 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~ 147 (243)
.+|+|.|.|.+.+..+. ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++++..+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 166 (444)
T 1igt_B 88 SEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 166 (444)
T ss_dssp GGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC-SSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred HHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEeccc-ccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCC
Confidence 99999999999986543 22345677763 2333222222 3457899999999996445765 99999988763
Q ss_pred CCC--CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEe-------------ecCCCCCeee---
Q psy11132 148 SPR--FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKG-------------NLNRLPPSYT--- 209 (243)
Q Consensus 148 ~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~-------------~~~~~~p~~~--- 209 (243)
... ............+.|.|..+..+| |.|+|.|.|..+.......+.+.+ .....+|.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~ 245 (444)
T 1igt_B 167 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFP 245 (444)
T ss_dssp TEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEEC
T ss_pred CeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecC
Confidence 211 000000001113568899998889 999999999988754444333210 0011234331
Q ss_pred ------eeccceeeeccCcccc----c--ccceEEeCCee
Q psy11132 210 ------LVFSQASYMSTSYYSF----E--QDSWMIDNENY 237 (243)
Q Consensus 210 ------~~~~~~~~~~~~~~~~----~--~~~W~~~~~~~ 237 (243)
+..++.+.+.|..... + .+.|+++|..+
T Consensus 246 p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~ 285 (444)
T 1igt_B 246 PKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEV 285 (444)
T ss_dssp CCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEEC
T ss_pred CchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccc
Confidence 2457788899987766 2 79999998654
No 151
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.90 E-value=6.2e-23 Score=145.88 Aligned_cols=173 Identities=17% Similarity=0.253 Sum_probs=113.9
Q ss_pred CCCcccccCCeEEEEEEeeCCCC-CceeEEEECC--eeec------------CCCceEEEEeeeeceEEEEeecCCCCCe
Q psy11132 16 NPERTLNVGERASLICSITKGDI-PLTIKWLKDG--RYLD------------NSAALSITHVDQYNSMLVIDSVSARHSG 80 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~-~~~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G 80 (243)
+....+.+|++++|.|.+..+.+ .+.+.|+|++ ..+. ...++.... ......|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-SGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGCE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-cCCEEEEEECCCCcccCE
Confidence 45677899999999999533443 4699999954 2210 123444332 223568999999999999
Q ss_pred eEEEEEEeCCC--cceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCee
Q psy11132 81 NYSCTVRNMVA--EDTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVN 154 (243)
Q Consensus 81 ~Y~C~~~~~~~--~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~ 154 (243)
.|.|.+.+..+ .......|.|.. +|.+...... .....|+.+.|.|.+.++.|++ .+.|+++|..+.......
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 164 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQES 164 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEE
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC-hhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEe
Confidence 99999998765 223344566653 3333322211 1123588999999996446654 999999999886541110
Q ss_pred --EEe-ecc---ceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 155 --VSD-LDS---FSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 155 --~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
... .++ ..+.|.|..+..+|+|.|+|.|.|......
T Consensus 165 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 165 VTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 000 111 134789999999999999999999876543
No 152
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.90 E-value=3.3e-23 Score=149.04 Aligned_cols=181 Identities=17% Similarity=0.286 Sum_probs=117.5
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECC--eee------------cCCCceEEEEeeeeceEEEEeec
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDG--RYL------------DNSAALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~ 74 (243)
+.+.. +....+.+|++++|.|.+.+..+.+ .+.|+|++ ..+ ....++.... ......|.|.++
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 98 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK-SGTSASLAISGL 98 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE-ETTEEEEEEESC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe-cCCeEEEEECCC
Confidence 34444 6677899999999999985333334 79999863 221 0123443332 223568999999
Q ss_pred CCCCCeeEEEEEEeCCCc---ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEe
Q psy11132 75 SARHSGNYSCTVRNMVAE---DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKP 146 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~ 146 (243)
+.+|+|.|+|.+.+..+. ......|.|.. +|.+...... .....|+.+.|.|.+.+..|+ +.++|+++|..
T Consensus 99 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 177 (234)
T 2j6e_L 99 RSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPS-SEELQANKATLVCLISDFFPGAVTVAWKADGAP 177 (234)
T ss_dssp CSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCC-HHHHTTSCCCEEECCCBCSSCCCEEEEEETTEE
T ss_pred CHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCC-hhHhcCCceEEEEEEEEEcCCceEEEEEECCEE
Confidence 999999999999987762 22234455532 3333322211 122358899999999533454 49999999998
Q ss_pred cCCCCCee--EEeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 147 LSPRFPVN--VSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 147 ~~~~~~~~--~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
+....... ....+ ...+.|.|..+..+|+|.|+|.|.|..+...+++
T Consensus 178 l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 178 VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 86542110 00011 1236788999999999999999999887654443
No 153
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.90 E-value=2e-23 Score=158.32 Aligned_cols=193 Identities=18% Similarity=0.294 Sum_probs=136.1
Q ss_pred eeEEEecCCCcc--CCCCCcccccCCeEEEEEEe----eCCCCCceeEEEECCeeecCC-CceEEEEeeeeceEEEEeec
Q psy11132 2 LVIFSTVPPKLS--PTNPERTLNVGERASLICSI----TKGDIPLTIKWLKDGRYLDNS-AALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 2 ~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~~----~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~ 74 (243)
+.|.|..+|... .......+.+|+.+.|.|.+ ..+.|.+.+.|++++..+... .++... .....|.|.++
T Consensus 111 ~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~---~~~~~L~i~~v 187 (339)
T 3o4o_C 111 IELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSV---RGTTHLLVHDV 187 (339)
T ss_dssp EEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEEC---TTSSEEEESSC
T ss_pred EEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEc---CCcceEEEccc
Confidence 356666665542 12233468899999999993 247788899999999888654 232221 11358999999
Q ss_pred CCCCCeeEEEEEEeCCCc----ceeEEEEEEEcCC-----CccccccCCCCCCCCCcEEEEEEee--cCCC-CCEEEEEe
Q psy11132 75 SARHSGNYSCTVRNMVAE----DTQVQRLIVNVPP-----KIESFAFPFDGLPEGARTRVICGVT--HGDP-PLTIRWLK 142 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~p-----~~~~~~~~~~~~~~g~~~~l~C~~~--~~~p-~~~~~W~~ 142 (243)
+.+|+|.|+|.+.|..+. .+..+.|.|...+ .+... .....+..|+.+.|.|.+. .|.| .+.+.|++
T Consensus 188 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~ 266 (339)
T 3o4o_C 188 ALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA 266 (339)
T ss_dssp CGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEES
T ss_pred CHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEE
Confidence 999999999999998763 4566778877532 32222 2335678899999999983 4777 88999999
Q ss_pred CCEecCCCCC---------eeEEeecc--ceeEEEEeecCCCCC-eeEEEEEEccCcceeeeEEEEEE
Q psy11132 143 DGKPLSPRFP---------VNVSDLDS--FSSLLSINSVSAAHS-GEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 143 ~~~~~~~~~~---------~~~~~~~~--~~~~l~i~~~~~~d~-g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
++..+..... ........ ..+.|.|.++..+|. |.|+|.|.|..|.....+.+.+.
T Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 267 NDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp SSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred CCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 9987653211 10100000 123799999999997 99999999999999888777654
No 154
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.89 E-value=3.5e-23 Score=163.09 Aligned_cols=224 Identities=16% Similarity=0.194 Sum_probs=132.3
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCC-ceeEEEECCeeecCCCceEEEEee---eeceEEEEeecCCCCCeeEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIP-LTIKWLKDGRYLDNSAALSITHVD---QYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C 84 (243)
+|.+...+....+.+|+.++|.|.+.+..|. +.+.|++++..+...........+ ...+.|.|.+++.+| |.|+|
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C 210 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 210 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEE
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEE
Confidence 5555444434457899999999999754464 799999998654211000000000 113479999999999 99999
Q ss_pred EEEeCCCcceeEEEEEEEc-----------------CCCccccccCCC-CCCCCCcEEEEEEeecCCCC----CEEEEEe
Q psy11132 85 TVRNMVAEDTQVQRLIVNV-----------------PPKIESFAFPFD-GLPEGARTRVICGVTHGDPP----LTIRWLK 142 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~-----------------~p~~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~----~~~~W~~ 142 (243)
.+.|..+.......+.+.. +|.+...++... .+..|+.+.|.|.+. |.|+ +.+.|++
T Consensus 211 ~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~-g~~p~p~~~~i~W~k 289 (457)
T 1hzh_H 211 NVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVV-DVSHEDPEVKFNWYV 289 (457)
T ss_dssp EEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEE-CCCTTCCCCEEEEEE
T ss_pred EEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEE-cccCCCCceEEEEEe
Confidence 9999776544333333221 122211111111 156799999999995 6644 3999999
Q ss_pred CCEecCCCCCeeEEeeccceeEEEEe---ecCCCC---CeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeec----
Q psy11132 143 DGKPLSPRFPVNVSDLDSFSSLLSIN---SVSAAH---SGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVF---- 212 (243)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~d---~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~---- 212 (243)
++..+............ .+.+.+. .+...| +|.|+|.|.|..+.......+.+.. ....+|.+.+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~--~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~-~~~~~P~v~~~~~~~~ 366 (457)
T 1hzh_H 290 DGVEVHNAKTKPREEQY--NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK-GQPREPQVYTLPPSRD 366 (457)
T ss_dssp TTEEECCCEEEEEEECT--TSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCC-CCCBCCEEEEECCCGG
T ss_pred CCccccccccccceecC--CCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEccc-CCCCCCeEEEECCCcc
Confidence 99887643221111111 1112222 233444 9999999998766543333332210 112456554432
Q ss_pred ---cceeeeccCcccc--c--ccceEEeCCee
Q psy11132 213 ---SQASYMSTSYYSF--E--QDSWMIDNENY 237 (243)
Q Consensus 213 ---~~~~~~~~~~~~~--~--~~~W~~~~~~~ 237 (243)
+..+.+.|...++ + .+.|++||..+
T Consensus 367 ~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~l 398 (457)
T 1hzh_H 367 ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 398 (457)
T ss_dssp GGGSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred ccCCCcEEEEEEEEeEECCCCEEEEEECCEEC
Confidence 3347899988765 2 79999998765
No 155
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.89 E-value=2.5e-22 Score=143.04 Aligned_cols=175 Identities=19% Similarity=0.256 Sum_probs=112.5
Q ss_pred CCcccccCCeEEEEEEeeCCCC--CceeEEEEC--Ceeec-----------------CCCceEEEEee-eeceEEEEeec
Q psy11132 17 PERTLNVGERASLICSITKGDI--PLTIKWLKD--GRYLD-----------------NSAALSITHVD-QYNSMLVIDSV 74 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~~-~~~~~l~i~~~ 74 (243)
....+.+|++++|.|.+. +.+ .+.+.|+|+ +..+. ...++.+.... ....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 8 GPELKKPGETVKISCKAS-GYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCEEECTTCCEEEEEEEE-SSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCeEecCCCcEEEEEEEe-CcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 345688999999999996 443 578999986 33221 12344333221 22468999999
Q ss_pred CCCCCeeEEEEEEeCCCc----ceeEEEEEEEcC----CCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCE
Q psy11132 75 SARHSGNYSCTVRNMVAE----DTQVQRLIVNVP----PKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGK 145 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~ 145 (243)
+.+|+|.|.|.+.+..+. ......|.|... |.+..... ...+..|+.+.|.|.+.++.|.+ .+.|++++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 165 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECC-CSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecC-ccccccCCeEEEEEEcccccCCCeEEEEEeCCc
Confidence 999999999999987631 223456777653 32222222 23567899999999995338887 999999987
Q ss_pred ecCCCCCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 146 PLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 146 ~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
.+............ ...+.|.|.. ...|.|.|+|.|.|..+.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPS-SPRPSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp CTTEEECCCEESSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGTEEEEEE
T ss_pred ccceEecCCcccCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCCccEEEe
Confidence 64311000001111 1135688844 444669999999998876554443
No 156
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.89 E-value=9.1e-23 Score=146.99 Aligned_cols=178 Identities=17% Similarity=0.289 Sum_probs=118.5
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee------------cCCCceEEEEeeeeceEEEEeecC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL------------DNSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
+.+...+....+.+|++++|.|.+. +.+.+.+.|+|++ ... ....++... ......+|.|.+++
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRAS-QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS-GSGTDFTLTISSLQ 102 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCC
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecC-CCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEE-cCCCEEEEEECCCC
Confidence 3444446667899999999999995 6677899999842 110 112344433 22236789999999
Q ss_pred CCCCeeEEEEEEeCCCc-ceeEEEEEEEcC---CCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCC
Q psy11132 76 ARHSGNYSCTVRNMVAE-DTQVQRLIVNVP---PKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPR 150 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~ 150 (243)
.+|+|.|+|.+.+..+. ......|.|... |.+...... .....|+.+.|.|.+.++.| .+.+.|+++|..+...
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCC-HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCC-hhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 99999999999876543 233445666442 322221111 22335889999999965466 6899999999988753
Q ss_pred C-Ce-eEEe-ec---cceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 151 F-PV-NVSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 151 ~-~~-~~~~-~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
. .. .... .+ ...+.|.|.....+|+|.|+|.|.|......
T Consensus 182 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 182 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred eeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 2 00 0000 01 1135688999989999999999999876543
No 157
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.89 E-value=7.1e-23 Score=145.24 Aligned_cols=177 Identities=19% Similarity=0.316 Sum_probs=116.7
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee------------cCCCceEEEEeeeeceEEEEeecC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL------------DNSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
|.+...+....+.+|++++|.|.+. +.+.+.+.|+|.+ ... ....++.... .....+|.|.+++
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 79 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQAS-QDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG-SGRDSSFTISSLE 79 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCC
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeC-CCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec-cCCEEEEEECCCC
Confidence 3444445667799999999999995 6677899999832 111 0123444332 2235689999999
Q ss_pred CCCCeeEEEEEEeCCCc-ceeEEEEEEE---cCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCC
Q psy11132 76 ARHSGNYSCTVRNMVAE-DTQVQRLIVN---VPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPR 150 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~ 150 (243)
.+|+|.|+|.+.+..+. ......|.|. .+|.+...+.. .....|+.+.|.|.+.++.| .+.+.|+++|..+...
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPS-SEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCC-ceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 99999999999876542 3344566763 33443332222 23346888999999964444 4599999999988753
Q ss_pred C-Ce-eEEe-ecc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 151 F-PV-NVSD-LDS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 151 ~-~~-~~~~-~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
. .. .... .++ ..+.|.|.....+|+|.|+|.|.|.....
T Consensus 159 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 159 VLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred eEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 1 11 0010 111 13467888888889999999999986543
No 158
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.89 E-value=4.4e-22 Score=157.52 Aligned_cols=212 Identities=15% Similarity=0.230 Sum_probs=130.2
Q ss_pred cccCCeEEEEEEeeCCCCC-c-eeEEEECCeeecCCCceEEE--E--eeeeceEEEEeecCCCCCeeEEEEEEeCCCcc-
Q psy11132 21 LNVGERASLICSITKGDIP-L-TIKWLKDGRYLDNSAALSIT--H--VDQYNSMLVIDSVSARHSGNYSCTVRNMVAED- 93 (243)
Q Consensus 21 ~~~g~~~~l~C~~~~~~~~-~-~v~W~~~~~~~~~~~~~~~~--~--~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~- 93 (243)
+.+|+.++|.|.+.+..|. + .+.|++++............ . .-.....|.|......|.|.|+|.+.+..+..
T Consensus 138 ~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 217 (475)
T 1iga_A 138 TQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 217 (475)
T ss_pred cCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCce
Confidence 3689999999999744465 4 99999987532111000000 0 00113468888888899999999999987632
Q ss_pred eeEEEEEEEc------------------CCCccccccCCCCCCCCCcEEEEEEeecCCCC---CEEEEEeCCEecCCCCC
Q psy11132 94 TQVQRLIVNV------------------PPKIESFAFPFDGLPEGARTRVICGVTHGDPP---LTIRWLKDGKPLSPRFP 152 (243)
Q Consensus 94 ~~~~~l~v~~------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~~~~~~~~~~ 152 (243)
...+.+.|.. +|.+...++....+..|+.+.|.|.+. |.++ +.+.| . +..+.....
T Consensus 218 ~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~-g~~p~~~~~i~W-~-~~~~~~~~~ 294 (475)
T 1iga_A 218 DVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLT-GLRDASGVTFTW-T-PSSGKSAVQ 294 (475)
T ss_pred eeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEE-cccCCCceEEEE-C-CCCcCCccc
Confidence 2233332311 222211111112357899999999995 6543 69999 4 433332111
Q ss_pred e-eEEeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeee--------ccceeeecc
Q psy11132 153 V-NVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLV--------FSQASYMST 220 (243)
Q Consensus 153 ~-~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~--------~~~~~~~~~ 220 (243)
. ...... ...+.|.|.++..+|+|.|+|.|.|..|.......+.+. ....+|.+.+. .+..+.+.|
T Consensus 295 ~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~--~~~~~P~v~~~~~~~~~v~~g~~~~L~C 372 (475)
T 1iga_A 295 GPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKS--GNTFRPEVHLLPPPSEELALNELVTLTC 372 (475)
T ss_pred cCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecC--CCCCCCeEEEECCChHHhccCCceEEEE
Confidence 1 000000 124679999999999999999999998876444444321 11256665433 345578999
Q ss_pred Ccccc-c---ccceEEeCCee
Q psy11132 221 SYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 221 ~~~~~-~---~~~W~~~~~~~ 237 (243)
....+ | .+.|++||+.+
T Consensus 373 ~~~g~~P~~~~v~W~k~g~~l 393 (475)
T 1iga_A 373 LARGFSPKDVLVRWLQGSQEL 393 (475)
T ss_pred EEeeeECCCCEEEEEECCEEC
Confidence 88765 2 89999998765
No 159
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=8.6e-22 Score=142.80 Aligned_cols=178 Identities=15% Similarity=0.208 Sum_probs=116.7
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--eee-----------------cCCCceEEEEe-eeeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYL-----------------DNSAALSITHV-DQYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~-~~~~~~l~i~~~~ 75 (243)
...+.+|++++|.|.+. +.| .+.+.|+|+. ..+ ....++.+... .....+|.|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~~-g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAAS-GFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEecCCcEEEEEEec-cccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 46688999999999996 555 5689999842 111 01234444332 1234689999999
Q ss_pred CCCCeeEEEEEEeCCCc--ceeEEEEEEEcCCC-------------cccc-ccCCCCCCCCCcEEEEEEeecCCCCCEEE
Q psy11132 76 ARHSGNYSCTVRNMVAE--DTQVQRLIVNVPPK-------------IESF-AFPFDGLPEGARTRVICGVTHGDPPLTIR 139 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~p~-------------~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 139 (243)
.+|+|.|+|.+.+..+. ......|.|..++. .... ......+.+|+++.|.|.+ .+.|.+.+.
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~v~ 168 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRA-SQSVRSNLA 168 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEE-SSCCTTCEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEe-CCCccceEE
Confidence 99999999999987222 23345677765421 1111 1122447799999999999 588888999
Q ss_pred EEe--CCEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEE
Q psy11132 140 WLK--DGKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 198 (243)
Q Consensus 140 W~~--~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~ 198 (243)
|++ ++..+. ...+... ........|.|.+++.+|+|.|.|.|.|..+... ....|.|.
T Consensus 169 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 169 WYQQKPGQAPRPLIYDASTRATGIPDRFSG-SGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEE-ECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCCccCCCEEE-ecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999 554331 0111221 1123356799999999999999999998654332 34556665
No 160
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=6.2e-22 Score=144.43 Aligned_cols=178 Identities=19% Similarity=0.248 Sum_probs=116.4
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEEC--Ceeec----------------CCCceEEEEe-eeeceEEEEeecCC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKD--GRYLD----------------NSAALSITHV-DQYNSMLVIDSVSA 76 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~--~~~~~----------------~~~~~~~~~~-~~~~~~l~i~~~~~ 76 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|+ +..+. ...++.+... .....+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~-g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVS-GFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CSEECTTSEEEEEEEEE-SSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CccccCCceEEEEEEEe-cccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 34688999999999996 543 579999985 22110 1234443322 12346899999999
Q ss_pred CCCeeEEEEEEeCCC-------c--ceeEEEEEEEcCCC-------------cccc-ccCCCCCCCCCcEEEEEEeecCC
Q psy11132 77 RHSGNYSCTVRNMVA-------E--DTQVQRLIVNVPPK-------------IESF-AFPFDGLPEGARTRVICGVTHGD 133 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~-------~--~~~~~~l~v~~~p~-------------~~~~-~~~~~~~~~g~~~~l~C~~~~~~ 133 (243)
+|+|.|.|.+.+..+ . ......|.|..++. .... ......+.+|++++|.|.+ .+.
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~ 166 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKG-SQN 166 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEEC-SSC
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEE-CCc
Confidence 999999999998753 1 12345677765431 1111 1222457899999999999 577
Q ss_pred CCCEEEEEe--CCEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 134 PPLTIRWLK--DGKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 134 p~~~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+.+.+.|++ ++..+. ...++... .......|.|.+++.+|+|.|.|.|.|..........|.|.
T Consensus 167 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~ 244 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGS-GSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELK 244 (257)
T ss_dssp CBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCS
T ss_pred CCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEe-cCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEe
Confidence 878999999 554331 01122221 12335689999999999999999999975222233455554
No 161
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.89 E-value=5.8e-24 Score=166.47 Aligned_cols=218 Identities=19% Similarity=0.270 Sum_probs=137.5
Q ss_pred CCcccccCCeEEEEEEeeCCC--CCceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEeec
Q psy11132 17 PERTLNVGERASLICSITKGD--IPLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVIDSV 74 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~--~~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~~ 74 (243)
....+.+|++++|.|.+. +. +.+.+.|+|++ ..+. ...++.+... ......|.|.++
T Consensus 7 ~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 7 GAELARPGASVKMSCKAS-GYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCEECTBCCEEECCEEC-SSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCeEecCCCCEEEEEEcc-CCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 445688999999999995 43 35689999863 2210 0123332221 122458999999
Q ss_pred CCCCCeeEEEEEEeCCCcceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCC
Q psy11132 75 SARHSGNYSCTVRNMVAEDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSP 149 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~ 149 (243)
+.+|+|.|+|.+.+..+.......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++++..+..
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~ 164 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGV 164 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCC-CCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSE
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCc-cccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCe
Confidence 99999999999988544444456777753 2333322222 3457899999999996444765 9999999875321
Q ss_pred CCCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEe---------ecC-----CCCCeee--ee
Q psy11132 150 RFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKG---------NLN-----RLPPSYT--LV 211 (243)
Q Consensus 150 ~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~---------~~~-----~~~p~~~--~~ 211 (243)
.......... ...+.|.|..+..+| |.|+|.|.|..|.......+.+.+ ... ..||... +.
T Consensus 165 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~ 243 (434)
T 1igy_B 165 HTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLL 243 (434)
T ss_dssp EECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHS
T ss_pred EecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcc
Confidence 0000000001 113568999988888 999999999988754443332210 000 0122222 44
Q ss_pred ccceeeeccCccccc------ccceEEeCCee
Q psy11132 212 FSQASYMSTSYYSFE------QDSWMIDNENY 237 (243)
Q Consensus 212 ~~~~~~~~~~~~~~~------~~~W~~~~~~~ 237 (243)
.++.+.+.|.....+ .+.|+++|..+
T Consensus 244 ~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~ 275 (434)
T 1igy_B 244 ITVTPKVTCVVVDISKDDPEVQFSWFVDNVEV 275 (434)
T ss_dssp TTSCCEEEEEECCCCSSCCCCCBCBBSSSCCB
T ss_pred cCCCcEEEEEEeccccCCCCeEEEEEeCCccc
Confidence 577888999876662 79999998764
No 162
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.89 E-value=1e-22 Score=153.71 Aligned_cols=183 Identities=19% Similarity=0.290 Sum_probs=113.3
Q ss_pred eEEEecCCCcc-CCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEEee----eeceEEEEeecCC
Q psy11132 3 VIFSTVPPKLS-PTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITHVD----QYNSMLVIDSVSA 76 (243)
Q Consensus 3 ~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~ 76 (243)
.|.|..+|... .......+.+|+.+.|.|.+.+..+++ .+.|+++|..+............ ...+.|.|.....
T Consensus 110 ~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 189 (327)
T 2wng_A 110 ELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTRE 189 (327)
T ss_dssp EEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTT
T ss_pred EEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhc
Confidence 56666655432 222346688999999999996443333 89999999988653321111000 1134677877777
Q ss_pred CCCeeEEEEEEeCCCcc---eeEEEE--EEEcCCCccccccCCCCCCCCCcEEEEEEeecC-CCCC-EEEEEeCCEecCC
Q psy11132 77 RHSGNYSCTVRNMVAED---TQVQRL--IVNVPPKIESFAFPFDGLPEGARTRVICGVTHG-DPPL-TIRWLKDGKPLSP 149 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~---~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~~-~~~W~~~~~~~~~ 149 (243)
+|.|.|+|.+.|..+.. .....+ .+..+|.+...... +.+|+.+.|.|.+. | .|++ .+.|+++|..+..
T Consensus 190 d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~---~~~G~~v~l~C~~~-g~~p~~~~v~W~k~g~~l~~ 265 (327)
T 2wng_A 190 DVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP---VRAENQVNVTCQVR-KFYPQRLQLTWLENGNVSRT 265 (327)
T ss_dssp GGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC---CSSTTCCEEEEEEE-EEBSSCEEEEEEETTEEEEE
T ss_pred CcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC---cCCCCcEEEEEEEc-cccCCCcEEEEEECCeEccC
Confidence 77899999999987652 223333 23445555443322 67899999999995 5 4544 8999999998754
Q ss_pred CCCeeEEee-cc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 150 RFPVNVSDL-DS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 150 ~~~~~~~~~-~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
......... ++ ..+.|.|..+..+|+|.|+|.|.|..|..
T Consensus 266 ~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 266 ETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred cccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 211111111 11 12568888889999999999999998865
No 163
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.89 E-value=8e-24 Score=150.04 Aligned_cols=174 Identities=16% Similarity=0.218 Sum_probs=114.7
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceeec------------CCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLD------------NSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+....+.+|++++|.|.+ .+.+.+.+.|+++ +..+. ...++.... ......|.|.+++.+|+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~ 83 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSG-DQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-SGTTATLTISGAQPEDEAA 83 (212)
T ss_dssp CSEEEEETTSCCCEEEEE-TTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEETTCCGGGCSE
T ss_pred CCeEEEeCCCcEEEEEec-CCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-eCCEEEEEECcCCcccCEE
Confidence 455678999999999997 4666668999985 33221 123444332 2235689999999999999
Q ss_pred EEEEEEeCCC-c--ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCe
Q psy11132 82 YSCTVRNMVA-E--DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 82 Y~C~~~~~~~-~--~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~ 153 (243)
|+|.+.+... . ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|+ +.+.|+++|..+......
T Consensus 84 Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 162 (212)
T 1nfd_E 84 YYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPS-PEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKT 162 (212)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCC-HHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBC
T ss_pred EEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCc-hHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeec
Confidence 9999997322 1 12334566643 2333222211 223468999999999644355 799999999987654221
Q ss_pred eE--Eeecc--ceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 154 NV--SDLDS--FSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 154 ~~--~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
.. ...+. ..+.|.|.++..+|+|.|+|.|.|..+....+
T Consensus 163 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 205 (212)
T 1nfd_E 163 TKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEKS 205 (212)
T ss_dssp CCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCCC
T ss_pred CCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEEE
Confidence 10 00111 13558899999999999999999988764433
No 164
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.89 E-value=1e-22 Score=145.21 Aligned_cols=178 Identities=17% Similarity=0.222 Sum_probs=117.5
Q ss_pred CcccccCCeEEEEEEeeCCCCCc---eeEEEECCeeecC----------------CCceEEE------EeeeeceEEEEe
Q psy11132 18 ERTLNVGERASLICSITKGDIPL---TIKWLKDGRYLDN----------------SAALSIT------HVDQYNSMLVID 72 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~~---~v~W~~~~~~~~~----------------~~~~~~~------~~~~~~~~l~i~ 72 (243)
++.+.+|++++|.|.+. +.+.+ .+.|+|++..+.. ..+.... .......+|.|.
T Consensus 10 ~V~~~~G~~v~L~C~~~-~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLL-PPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp EEEEETTSCEEECCEEC-SSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred EEEEecCCCEEEEEEEE-CCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 45578899999999985 44443 5899997654311 0111110 011124679999
Q ss_pred ecCCCCCeeEEEEEEeCCCcc-eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC
Q psy11132 73 SVSARHSGNYSCTVRNMVAED-TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 151 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~ 151 (243)
+++.+|+|.|+|.+.+..+.. .....+.+..+|........ .....++...+.|.+..+.|++.+.|++++..+....
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~ 167 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQE-VTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT 167 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECC-BCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccc-eeecceeeeeeeeeecCCCCCCEEEEEECCccccCCc
Confidence 999999999999999876653 33445555555554433332 4556778888888877788999999998876443221
Q ss_pred CeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 152 PVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 152 ~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
........ ...+.|.|..+..+|+|.|+|.|.|..+....+..+.+
T Consensus 168 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 168 QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 11111101 11357999999999999999999999887655544443
No 165
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.89 E-value=3.4e-23 Score=145.82 Aligned_cols=156 Identities=16% Similarity=0.280 Sum_probs=106.5
Q ss_pred cccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEEEE
Q psy11132 21 LNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQRLI 100 (243)
Q Consensus 21 ~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 100 (243)
+.+|++++|.|.+ +.+.+.|+|+|..+... ......|.|.+++.+|+|.|+|.+.+.. +..+.|.
T Consensus 15 ~~~G~~v~L~C~~----p~~~i~W~k~g~~l~~~--------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~ 79 (204)
T 1sy6_A 15 YQEDGSVLLTCDA----EAKNITWFKDGKMIGFL--------TEDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVY 79 (204)
T ss_dssp CCSSSEEEEEECS----CSSEEEEEETTEEEEEE--------ESSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEE
T ss_pred ecCCCeEEEEEcC----CCCEEEEEECCEECCCC--------CCCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEE
Confidence 4689999999987 56799999999877532 1125679999999999999999975422 2234444
Q ss_pred EEc------C-------------------C---CccccccCCCCCC-CCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC
Q psy11132 101 VNV------P-------------------P---KIESFAFPFDGLP-EGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 151 (243)
Q Consensus 101 v~~------~-------------------p---~~~~~~~~~~~~~-~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~ 151 (243)
+.. . . ...........+. +|+++.|.|. +.|.+.+.|++++..+....
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~---g~p~p~i~W~k~~~~l~~~~ 156 (204)
T 1sy6_A 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP---QYPGSEILWQHNDKNIGGDE 156 (204)
T ss_dssp EEC------------------------------------CCCCEEEEETTEEEEECS---CCCSSCEEEEETTEEESCCT
T ss_pred EEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC---CCCCCceEEEECCEECCCcc
Confidence 430 0 0 0000000112233 8999999996 67888999999999876432
Q ss_pred C-eeEEeeccceeEEEEeec-CCCCCeeEEEEEEccCcce-eeeEEEEE
Q psy11132 152 P-VNVSDLDSFSSLLSINSV-SAAHSGEYTCVASNTAAQA-RYSSKLQV 197 (243)
Q Consensus 152 ~-~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n~~g~~-~~~~~l~v 197 (243)
. ..... ....|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.+
T Consensus 157 ~~~~~~~---~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 157 DDKNIGS---DEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp TCTTEEE---ETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred CCceEec---CCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 1 11111 1468999999 9999999999999999963 34444544
No 166
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.89 E-value=1.3e-21 Score=142.66 Aligned_cols=179 Identities=17% Similarity=0.243 Sum_probs=119.2
Q ss_pred CCCcccccCCeEEEEEEeeCCCC--CceeEEEEC--Ceeec-----------------CCCceEEEEe-eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI--PLTIKWLKD--GRYLD-----------------NSAALSITHV-DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~ 73 (243)
+....+.+|++++|.|.+. +.+ .+.+.|+|+ +..+. ...++.+... .....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~-g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKAS-GYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp CCCEEECTTCCEEEEEEEC-SSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEec-cccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 3456688999999999985 544 569999984 22210 1234443322 12346899999
Q ss_pred cCCCCCeeEEEEEEeCCCc-----ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-----EEEEEe-
Q psy11132 74 VSARHSGNYSCTVRNMVAE-----DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-----TIRWLK- 142 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-----~~~W~~- 142 (243)
++.+|+|.|.|.+.+..+. ....+.|.|..++.+...+ ....+.+|++++|.|.+ .+.|++ .+.|++
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p-~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTP-LSLPVSLGDQASISCRS-SQSIVHSNGNTYLEWYLQ 163 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEEC-SEEEECTTCCEEEEEEE-SSCCBCTTSCBCEEEEEE
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecC-cEEEEecCCcEEEEeEe-cCcccccccceEEEEEEE
Confidence 9999999999999987552 2234567776555443322 22457899999999999 576654 999999
Q ss_pred -CCEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce-eeeEEEEEE
Q psy11132 143 -DGKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA-RYSSKLQVK 198 (243)
Q Consensus 143 -~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~~~l~v~ 198 (243)
++..+. ...+.... .......|.|.+++.+|+|.|.|.|.|..... .....|.|.
T Consensus 164 ~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 164 KPGQSPKLLIYKVSNRFSGVPDRFSGS-GSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp CTTSCEEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCCCCcEEEEEEeCCCCCccCCcEEEE-ccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 554331 01122221 22335689999999999999999999864432 234566666
No 167
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.89 E-value=1.4e-24 Score=169.88 Aligned_cols=226 Identities=13% Similarity=0.178 Sum_probs=139.8
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEE--eeeeceEEEEeecCCCCCeeEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITH--VDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
+|.+........+.+|+.++|.|.+.+..|.+ .+.|++++..+.......... .-...+.|.|.+++.+| |.|+|.
T Consensus 119 ~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~ 197 (434)
T 1igy_B 119 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCN 197 (434)
T ss_dssp CCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEE
T ss_pred CCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEE
Confidence 45554333333467899999999997444665 999999987532100000000 00113579999999889 999999
Q ss_pred EEeCCCcceeEEEEEEEc---------C---CCccccccCCCC-CCCCCcEEEEEEeecCCC----CCEEEEEeCCEecC
Q psy11132 86 VRNMVAEDTQVQRLIVNV---------P---PKIESFAFPFDG-LPEGARTRVICGVTHGDP----PLTIRWLKDGKPLS 148 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~---------~---p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~p----~~~~~W~~~~~~~~ 148 (243)
+.|..+.......+.+.. . |.+...++.... +..|+.+.|.|.+. |.+ .+.+.|++++..+.
T Consensus 198 a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~-g~~p~P~~~~i~W~k~~~~~~ 276 (434)
T 1igy_B 198 VAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVV-DISKDDPEVQFSWFVDNVEVH 276 (434)
T ss_dssp EECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEEC-CCCSSCCCCCBCBBSSSCCBC
T ss_pred EEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEe-ccccCCCCeEEEEEeCCcccC
Confidence 999888754444333221 0 222222111011 67899999999995 663 45899999998765
Q ss_pred CCCCeeEE-eec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeee-------ccceee
Q psy11132 149 PRFPVNVS-DLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLV-------FSQASY 217 (243)
Q Consensus 149 ~~~~~~~~-~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~ 217 (243)
........ ..+ ...+.|.|..+..+|+|.|+|.|.|..|.......+.+.. ....+|.+.+. .++.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~-~~~~~P~v~~~~~~~~~~~~~~~~ 355 (434)
T 1igy_B 277 TAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK-GKPRAPQVYTIPPPKEQMAKDKVS 355 (434)
T ss_dssp CCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCC-SCCBCCCCEEECCCSSSSSSSEEE
T ss_pred CcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccC-CCCcCCEEEEECCCHHHhcCCcEE
Confidence 33211111 001 1235689999999999999999999988653322222100 01145554432 245688
Q ss_pred eccCcccc-c---ccceEEeCCee
Q psy11132 218 MSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 218 ~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
+.|...++ | .++|++||..+
T Consensus 356 L~C~~~g~~P~~~~v~W~k~g~~l 379 (434)
T 1igy_B 356 LTCMITDFFPEDITVEWQSDGQAP 379 (434)
T ss_dssp EEEEEEEEBCSCEEEEEEETTSCC
T ss_pred EEEEEEeeECCCeEEEEEECCEec
Confidence 99988764 2 79999999764
No 168
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=145.39 Aligned_cols=169 Identities=15% Similarity=0.185 Sum_probs=117.2
Q ss_pred cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCc-ceeEE
Q psy11132 19 RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAE-DTQVQ 97 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~ 97 (243)
..+.+|+.+.|.|.+. .|.+.+.|++++......... . . ... +. ...|+|.|+|.+.+..+. .+..+
T Consensus 105 ~~v~~G~~v~l~C~~~--~p~~~v~w~~~~~~~~~~~~~--~--~-~~~-~~----~~~d~G~Y~C~a~n~~~~~~s~~~ 172 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT--DPQLVVTLHEKKGDVALPVPY--D--H-QRG-FS----GIFEDRSYICKTTIGDREVDSDAY 172 (289)
T ss_dssp EEESSCCCEEECCCBS--CTTSCEEEEESSCCSCCCCCE--E--T-TTE-EE----ECCCSSEEEEEEEETTEEEECCCE
T ss_pred EEeecCCeEEEEeEcC--CCCceEEEEeCCCCCccceee--c--C-CcC-ee----eeccCcEEEEEEEeCCceeeeeeE
Confidence 5688999999999984 556688898865221111110 0 0 011 11 357999999999976654 34445
Q ss_pred EEEEEc--CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee----ccceeEEEEeecC
Q psy11132 98 RLIVNV--PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL----DSFSSLLSINSVS 171 (243)
Q Consensus 98 ~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~ 171 (243)
.+.+.. +|.+...+.. ..+.+|+.+.|.|.+ .+.|.+.+.|++++.............. ....+.|.|.++.
T Consensus 173 ~l~v~~~~~p~i~~~~~~-~~v~~G~~v~L~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 250 (289)
T 3mjg_X 173 YVYRLQVSSINVSVNAVQ-TVVRQGENITLMCIV-IGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAE 250 (289)
T ss_dssp EEEECCCCCCCCEEEESC-SEEETTSCEEEEEEE-ESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCC
T ss_pred EEEecCCCCCCcEEeCCc-ceeEcCCCEEEEEEE-CCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccC
Confidence 666665 4444433332 557789999999999 5899999999988765543222111111 2235789999999
Q ss_pred CCCCeeEEEEEEccCcceeeeEEEEEEeec
Q psy11132 172 AAHSGEYTCVASNTAAQARYSSKLQVKGNL 201 (243)
Q Consensus 172 ~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~ 201 (243)
.+|+|.|+|.|.|..|....++.|.|.+.+
T Consensus 251 ~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 251 LEDSGTYTCNVTESVNDHQDEKAINITVVE 280 (289)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred hhhCcEEEEEeecCCCCceeEEEEEEEEEe
Confidence 999999999999999999999999998543
No 169
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.89 E-value=6.2e-22 Score=165.23 Aligned_cols=217 Identities=13% Similarity=0.114 Sum_probs=119.4
Q ss_pred CCcccccC--CeEEEEEEeeCCCCCceeEEEEC--CeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCc
Q psy11132 17 PERTLNVG--ERASLICSITKGDIPLTIKWLKD--GRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAE 92 (243)
Q Consensus 17 ~~~~~~~g--~~~~l~C~~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 92 (243)
....+.+| +.++|.|.+. + |.+.+.|+++ +..+......... .....|.|.+++.+|.|.|+|.+.+....
T Consensus 134 ~~~~v~~G~~~~v~L~C~~~-~-p~~~v~w~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 208 (772)
T 3v2a_R 134 GVVYITENKNKTVVIPCLGS-I-SNLNVSLCARYPEKRFVPDGNRISW---DSKKGFTIPSYMISYAGMVFCEAKINDES 208 (772)
T ss_dssp EEEEEESSCCCEEEECCCCS-C-SSCCEEEEEETTTEEECCCSSSCEE---ETTTEEEEEGGGTTTCSEEEEEEEETTEE
T ss_pred eeEEEecCCCCeEEEEccCC-C-CCcEEEEEecCCCccccCCCceeec---CCCCCeEecCCChhhCeEEEEEEEECCce
Confidence 45667889 8999999984 3 6679999997 6665443322111 12567999999999999999999975443
Q ss_pred c-eeEEEEEEEcCCCc--cccccCCCCCCCCCcEEEEEEeecC-CCCCEEEEEeCCEecCCCCCeeEE-------eeccc
Q psy11132 93 D-TQVQRLIVNVPPKI--ESFAFPFDGLPEGARTRVICGVTHG-DPPLTIRWLKDGKPLSPRFPVNVS-------DLDSF 161 (243)
Q Consensus 93 ~-~~~~~l~v~~~p~~--~~~~~~~~~~~~g~~~~l~C~~~~~-~p~~~~~W~~~~~~~~~~~~~~~~-------~~~~~ 161 (243)
. +..+.+.+...+.. ...+.....+.+|+.+.|.|.+... .+.+.+.|++++..+......... .....
T Consensus 209 ~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (772)
T 3v2a_R 209 YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKF 288 (772)
T ss_dssp EECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEE
T ss_pred EEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEE
Confidence 2 22344444433222 2222222357789999999999532 456799999998876543222111 11223
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCC-----CCCeeeeeccceeeeccCcccc--cccceEEeC
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNR-----LPPSYTLVFSQASYMSTSYYSF--EQDSWMIDN 234 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~-----~~p~~~~~~~~~~~~~~~~~~~--~~~~W~~~~ 234 (243)
.+.|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+.. .++...+..++.+.+.|..... +.+.|+++|
T Consensus 289 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g 368 (772)
T 3v2a_R 289 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNG 368 (772)
T ss_dssp EEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC---------------------------------------
T ss_pred EEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECC
Confidence 578999999999999999999999998888888888742211 0122345567788899987665 489999998
Q ss_pred CeeE
Q psy11132 235 ENYV 238 (243)
Q Consensus 235 ~~~~ 238 (243)
..+.
T Consensus 369 ~~l~ 372 (772)
T 3v2a_R 369 IPLE 372 (772)
T ss_dssp ----
T ss_pred EeCC
Confidence 7653
No 170
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.89 E-value=4.7e-22 Score=143.38 Aligned_cols=169 Identities=15% Similarity=0.177 Sum_probs=111.4
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceee---------------cCCCceEEEEeeeeceEEEEeecCC
Q psy11132 14 PTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYL---------------DNSAALSITHVDQYNSMLVIDSVSA 76 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~---------------~~~~~~~~~~~~~~~~~l~i~~~~~ 76 (243)
..+..+.+.+|++++|.|. . +.+.+.+.|+|+ +..+ ....++.+........+|.|.+++.
T Consensus 5 q~p~~~~v~~G~~v~L~C~-~-~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 82 (238)
T 2p1y_A 5 QSPRNKVAVTGGKVTLSCN-Q-TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP 82 (238)
T ss_dssp EECSEEEEETTCCEEEEEE-E-CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG
T ss_pred ECccceEEeCCCEEEEEee-c-CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc
Confidence 3355677899999999999 3 667789999995 2111 0123444333223356899999999
Q ss_pred CCCeeEEEEEEeCCCc-----ceeEEEEEEEcCCC------------ccccccCCCCCCCCCcEEEEEEeecCCCCCEEE
Q psy11132 77 RHSGNYSCTVRNMVAE-----DTQVQRLIVNVPPK------------IESFAFPFDGLPEGARTRVICGVTHGDPPLTIR 139 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~p~------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 139 (243)
+|+|.|.|.+.+..+. ......|.|...+. +... .....+.+|+++.|.|.+ .+.|.+.+.
T Consensus 83 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~-~~~p~~~i~ 160 (238)
T 2p1y_A 83 SQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQS-PQSLTVWEGETAILNCSY-ENSAFDYFP 160 (238)
T ss_dssp GGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEE-CSEEEEETTSCEEEEEEC-CCTTCCEEE
T ss_pred ccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEcc-CceEEEeCCCeEEEEEEE-ecCCCCcEE
Confidence 9999999999987542 12345677765442 1111 222456789999999999 588889999
Q ss_pred EEeCCE--ecC------------CCCCeeEEe-eccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 140 WLKDGK--PLS------------PRFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 140 W~~~~~--~~~------------~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
|++++. ... ...+..... .......|.|.+++.+|+|.|.|.|.|..
T Consensus 161 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 161 WYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 998642 100 011111111 12234689999999999999999999974
No 171
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.88 E-value=1.5e-22 Score=146.79 Aligned_cols=178 Identities=18% Similarity=0.240 Sum_probs=116.5
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE----------------CCeeecCC---CceEEEEeeeeceEEEEe
Q psy11132 12 LSPTNPERTLNVGERASLICSITKGDIPLTIKWLK----------------DGRYLDNS---AALSITHVDQYNSMLVID 72 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~----------------~~~~~~~~---~~~~~~~~~~~~~~l~i~ 72 (243)
+...+..+.+.+|++++|.|.+. +.+.+.+.|+| ++...... .++.+........+|.|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSL-DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEES-SSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred cEECCcEEEEeCCCcEEEEeEec-CCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 34445567789999999999985 66778999998 22222221 344444333335689999
Q ss_pred ecCCCCCeeEEEEEEeCCC----cceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEE
Q psy11132 73 SVSARHSGNYSCTVRNMVA----EDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWL 141 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~ 141 (243)
+++.+|+|.|.|.+.+..+ .......|.|.. +|.+.........+..|+.+.|.|.+.+..|++ .+.|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 9999999999999987543 122345677764 233322222212344599999999995334433 89999
Q ss_pred eCCEecCCCCCeeEEe-------ecc---ceeEEEEeecCCCC-CeeEEEEEEccCccee
Q psy11132 142 KDGKPLSPRFPVNVSD-------LDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQAR 190 (243)
Q Consensus 142 ~~~~~~~~~~~~~~~~-------~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~ 190 (243)
++|..+.......... .++ ..+.|.|.....+| .|.|+|.|.|......
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 9999887542211100 011 12458888887778 9999999999876554
No 172
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.88 E-value=3.8e-22 Score=137.47 Aligned_cols=157 Identities=17% Similarity=0.250 Sum_probs=111.1
Q ss_pred CCcccccCCeEEEEEEeeC-CCCCceeEEEE--CCeeec----------CCCceEEEEeeeeceEEEEeecCCCCCeeEE
Q psy11132 17 PERTLNVGERASLICSITK-GDIPLTIKWLK--DGRYLD----------NSAALSITHVDQYNSMLVIDSVSARHSGNYS 83 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~-~~~~~~v~W~~--~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 83 (243)
..+...+|++++|.|.... +.+.+.|.|++ ++..+. ...+..+. .+++|.|.+++++|+|.|+
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~----~ngsL~I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF----KNGTLKIKHLKTDDQDIYK 82 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC----TTSCEEECSCCGGGCEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC----CCCCEEECCCChhhCEEEE
Confidence 4566889999999995421 34567999999 887662 23343332 2568999999999999999
Q ss_pred EEEEeCCCcc--eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccc
Q psy11132 84 CTVRNMVAED--TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSF 161 (243)
Q Consensus 84 C~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~ 161 (243)
|.+.+..+.. ...+.|.|..+...+.... .+..+.|.|.+ .+.|.+.+.|+++|..+ .. .
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~------~~~~v~L~C~~-~~~p~~~~~W~~~g~~l-~~-----~----- 144 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQERVSKPKISW------TCINTTLTCEV-MNGTDPELNLYQDGKHL-KL-----S----- 144 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECCCCCCEEEE------ETTTTEEEEEC-SSCSSCEEEEEESSCEE-EE-----E-----
T ss_pred EEEEeCCCceeEEEEEEEEEcCcCCCCEEEE------ccCcEEEEeEc-cCCCCCEEEEEECCEEC-CC-----C-----
Confidence 9999987764 3566788876432221111 23368999999 57788999999999877 11 0
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEE
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 196 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~ 196 (243)
...+.+.. ..+|+|.|+|.|.|..|.......+.
T Consensus 145 ~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 145 QRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp SSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred CcEEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 12233332 47899999999999999887766553
No 173
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.88 E-value=1.9e-21 Score=141.76 Aligned_cols=184 Identities=16% Similarity=0.171 Sum_probs=118.1
Q ss_pred CccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee-------------cCCCceEEE-EeeeeceEEEEeec
Q psy11132 11 KLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL-------------DNSAALSIT-HVDQYNSMLVIDSV 74 (243)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~-------------~~~~~~~~~-~~~~~~~~l~i~~~ 74 (243)
.+...+....+.+|++++|.|.+. +.+.+.+.|+|.. ... ....++... .......+|.|.++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYS-YSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEE-CSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred EEEecCceEEecCCCeEEEEEEeC-CCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 344555667899999999999996 6688899999832 110 112233332 11223568999999
Q ss_pred CCCCCeeEEEEEEeCCCc----ceeEEEEEEEc--------------------CCCccccccCCCCCCCCCcEEEEEEee
Q psy11132 75 SARHSGNYSCTVRNMVAE----DTQVQRLIVNV--------------------PPKIESFAFPFDGLPEGARTRVICGVT 130 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~ 130 (243)
+.+|+|.|.|.+.+..+. ......|.|.. +|.+...+ ....+.+|++++|.|.+.
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~ 162 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP-RNKVTVTGENVTLSCRQT 162 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESC-SEEEEETTCCEEECEEEC
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC-CEEEEeCCCcEEEEEEcC
Confidence 999999999999986542 22334666664 12222211 113456899999999994
Q ss_pred cCCCCCEEEEEeCCEecC-----------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee--e
Q psy11132 131 HGDPPLTIRWLKDGKPLS-----------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR--Y 191 (243)
Q Consensus 131 ~~~p~~~~~W~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~--~ 191 (243)
+. .+.+.|++...... ...++...........|.|.+++.+|+|.|.|.|.|..|... .
T Consensus 163 -~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~ 240 (256)
T 3tf7_C 163 -NS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGE 240 (256)
T ss_dssp -SC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECC
T ss_pred -CC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECC
Confidence 55 67999998321100 011111111123356899999999999999999999877543 2
Q ss_pred eEEEEEE
Q psy11132 192 SSKLQVK 198 (243)
Q Consensus 192 ~~~l~v~ 198 (243)
...|.|.
T Consensus 241 gt~l~v~ 247 (256)
T 3tf7_C 241 GSKLTVL 247 (256)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 3455555
No 174
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.88 E-value=6.5e-22 Score=141.19 Aligned_cols=174 Identities=18% Similarity=0.241 Sum_probs=113.7
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-------------------CCCceEEEEee-eeceEEEEee
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-------------------NSAALSITHVD-QYNSMLVIDS 73 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-------------------~~~~~~~~~~~-~~~~~l~i~~ 73 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|+. .... ...++.+.... ....+|.|.+
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATS-GFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred ceeEcCCCEEEEEEEec-CccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 44688999999999996 443 5689999853 2110 01344433221 2246899999
Q ss_pred cCCCCCeeEEEEEEeCCC-----cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeC
Q psy11132 74 VSARHSGNYSCTVRNMVA-----EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKD 143 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~ 143 (243)
++.+|+|.|.|.+.+..+ .......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|+++
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 166 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 166 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCC-SCCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcccc-ccccCCCcEEEEEEEccEECCCCEEEEecC
Confidence 999999999999988653 222345666664 2333222222 3456899999999996435877 9999999
Q ss_pred CEecCCCCCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 144 GKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 144 ~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
|..+...........+ ...+.|.|..+..+| |.|+|.|.|..|.......
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 167 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp TBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 8765421111111111 113568899888889 9999999999887654443
No 175
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.88 E-value=5.2e-22 Score=136.87 Aligned_cols=156 Identities=17% Similarity=0.190 Sum_probs=109.3
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEEC-Ceeec------------CC--CceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKD-GRYLD------------NS--AALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~-~~~~~------------~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
..+.+.+|++++|.|.+....+.+.|.|+++ +..+. .. .+..+ ...+.+|.|.+++.+|+|.
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l---~~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL---DKTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE---CTTTCCEEECSCCGGGCEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE---eCCCccEEEcCCCHHHCeE
Confidence 4567899999999999743334679999994 32221 11 22222 1235789999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccc
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSF 161 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~ 161 (243)
|+|.+.+.. .....+.|.|..++..+... ..+..+.|.|.+..+ |.+.+.|++++..+.. ..
T Consensus 84 Y~C~v~~~~-~~~~~~~L~V~~~~~~P~i~------~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~----------~~ 145 (180)
T 2dru_A 84 YYMRMLHET-EDQWKITMEVYEMVSKPMIY------WECSNATLTCEVLEG-TDVELKLYQGKEHLRS----------LR 145 (180)
T ss_dssp EEEEEESSS-EEEEEEEEEEECCCCCCEEE------EEGGGTEEEEECSSC-TTCEEEEEETTEEEEE----------ES
T ss_pred EEEEEEcCC-eEEEEEEEEEECCCCCCEEE------ecCCCEEEEEEeCCC-CCCEEEEEECCeECcC----------CC
Confidence 999998765 55667788887654332221 134669999999545 8999999999987751 01
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
...+.+.. .+|+|.|+|.|.|..+.......+
T Consensus 146 ~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 146 QKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp SSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred CCEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 23455532 789999999999999877655443
No 176
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.88 E-value=9.6e-22 Score=139.13 Aligned_cols=171 Identities=21% Similarity=0.272 Sum_probs=111.6
Q ss_pred CCcccccCCeEEEEEEeeCCCC--CceeEEEEC--Ceeec----------------CCCceEEEEee-eeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKGDI--PLTIKWLKD--GRYLD----------------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~--~~~~~----------------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+. +.+ .+.+.|+|+ +.... ...++.+.... ....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVT-GDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp SCSEECTTSCEEEEEEEE-SSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEecCCCcEEEEEEEe-cccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 345688999999999996 443 368999985 22211 12344443321 124689999999
Q ss_pred CCCCeeEEEEEEeCCCcceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCC
Q psy11132 76 ARHSGNYSCTVRNMVAEDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPR 150 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~ 150 (243)
.+|+|.|.|.+.+.. .......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++++..+...
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~ 164 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 164 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCT-TSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCC-cccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceE
Confidence 999999999998753 222335666653 2333222222 4467899999999996444777 99999998764311
Q ss_pred CCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceee
Q psy11132 151 FPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARY 191 (243)
Q Consensus 151 ~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 191 (243)
......... ...+.|.|..+..+| |.|+|.|.|..|....
T Consensus 165 ~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 165 TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp ECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred EcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 111111111 124568898888867 9999999999887643
No 177
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.88 E-value=2.7e-22 Score=145.89 Aligned_cols=177 Identities=20% Similarity=0.290 Sum_probs=116.4
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCC-----CceeEEEECCe--ee---c---------CCCceEEEEeeeeceEEE
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDI-----PLTIKWLKDGR--YL---D---------NSAALSITHVDQYNSMLV 70 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-----~~~v~W~~~~~--~~---~---------~~~~~~~~~~~~~~~~l~ 70 (243)
+.+...+....+.+|++++|.|.+. +.+ .+.+.|+|++. .+ . ...++.... .....+|.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~ 112 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSS-QSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-SGTDFTLR 112 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEES-SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEE
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcC-CCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-cCCEEEEE
Confidence 4444446677899999999999995 555 57999999641 11 0 123443332 22346899
Q ss_pred EeecCCCCCeeEEEEEEeCCCc-ceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCE
Q psy11132 71 IDSVSARHSGNYSCTVRNMVAE-DTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGK 145 (243)
Q Consensus 71 i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~ 145 (243)
|.+++.+|+|.|.|.+.+..+. ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|+ +.+.|+++|.
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 191 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 191 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCC-hhhcCCCcEEEEEEEeeEeCCCcEEEEEECCe
Confidence 9999999999999999876543 22334566654 2333322211 123368999999999644565 4899999999
Q ss_pred ecCCC-CCe-eEE-eec---cceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 146 PLSPR-FPV-NVS-DLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 146 ~~~~~-~~~-~~~-~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
.+... ... ... ..+ ...+.|.|..+..+|+|.|+|.|.|.....
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 192 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred ecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 87654 110 000 011 113568999999999999999999976553
No 178
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.88 E-value=4e-21 Score=139.57 Aligned_cols=172 Identities=17% Similarity=0.272 Sum_probs=112.6
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCe-----ee---------cCCCceEEEEeeeeceEEEEeecC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGR-----YL---------DNSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~-----~~---------~~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
+.+...+..+.+.+|++++|.|.+. +.+.+.+.|+|+.. .+ ....++.... .....+|.|.+++
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 82 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRAS-QDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG-SGTDYSLTISNLE 82 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEES-SCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCC
T ss_pred eeEEecCCEEEeeCCCcEEEEEEec-ccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC-CCCEEEEEEccCC
Confidence 3445556667789999999999995 67777999998531 10 1123343222 2234689999999
Q ss_pred CCCCeeEEEEEEeCCCc-ceeEEEEEEEcCC------------------CccccccCCCCCCCCCcEEEEEEeecCCC--
Q psy11132 76 ARHSGNYSCTVRNMVAE-DTQVQRLIVNVPP------------------KIESFAFPFDGLPEGARTRVICGVTHGDP-- 134 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p------------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-- 134 (243)
.+|+|.|.|.+.+..+. ......|.|..++ ...........+.+|+++.|.|.+ .+.+
T Consensus 83 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~ 161 (250)
T 3esu_F 83 QEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKD-SGYAFS 161 (250)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEEC-CSTTGG
T ss_pred hhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEe-cCCccc
Confidence 99999999999876553 2233456665431 111111222457789999999999 4666
Q ss_pred CCEEEEEeC--CEecCC-----------------CCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEc
Q psy11132 135 PLTIRWLKD--GKPLSP-----------------RFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASN 184 (243)
Q Consensus 135 ~~~~~W~~~--~~~~~~-----------------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n 184 (243)
.+.+.|+++ +..+.. ..++..... ......|.|.+++.+|+|.|.|.|.+
T Consensus 162 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 162 SSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp GSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 789999987 332210 012222211 13346799999999999999999997
No 179
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.88 E-value=6.3e-21 Score=140.50 Aligned_cols=187 Identities=17% Similarity=0.243 Sum_probs=121.2
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCe-----eec---------CCCceEEEEeeeeceEEEEeec
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGR-----YLD---------NSAALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~-----~~~---------~~~~~~~~~~~~~~~~l~i~~~ 74 (243)
.+.+...+....+.+|++++|.|.+. +.+.+.+.|+|++. .+. ...++.... .....+|.|.++
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~-~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 89 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRAS-QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-SGTDFTLTISSL 89 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSC
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcC-CCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec-cCCeEEEEEccC
Confidence 34555556777899999999999995 66778999998642 111 123444332 223468999999
Q ss_pred CCCCCeeEEEEEEeCCCc-ceeEEEEEEEcCCC-------------ccccccCCCCCCCCCcEEEEEEeecCCC--CCEE
Q psy11132 75 SARHSGNYSCTVRNMVAE-DTQVQRLIVNVPPK-------------IESFAFPFDGLPEGARTRVICGVTHGDP--PLTI 138 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~ 138 (243)
+.+|+|.|.|.+.+..+. ......|.|..+|. +.........+.+|+++.|.|.+. +.+ .+.+
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~-g~~~~~~~v 168 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAAS-GFTISDYWI 168 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEE-SSCGGGSEE
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEec-CccCCCCEE
Confidence 999999999999986543 23345666665432 222222235678899999999994 655 5899
Q ss_pred EEEeCC--Eec-----------------CCCCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEccC---cce--eeeE
Q psy11132 139 RWLKDG--KPL-----------------SPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTA---AQA--RYSS 193 (243)
Q Consensus 139 ~W~~~~--~~~-----------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~---g~~--~~~~ 193 (243)
.|++++ ..+ ....++..... ......|.|.+++.+|+|.|.|.|.|.. +.. ....
T Consensus 169 ~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt 248 (276)
T 3auv_A 169 HWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGT 248 (276)
T ss_dssp EEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCE
T ss_pred EEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCE
Confidence 999863 111 01112222221 1234689999999999999999999973 221 2335
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.|.|.
T Consensus 249 ~l~V~ 253 (276)
T 3auv_A 249 LVTVS 253 (276)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 66665
No 180
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.87 E-value=4.1e-22 Score=141.79 Aligned_cols=180 Identities=13% Similarity=0.187 Sum_probs=113.6
Q ss_pred cCCCccCCCCCcc--cccCCeEEEEEEeeCCC--C-CceeEEEECCeeecCCCceEEEEe----eeeceEEEEeecCCCC
Q psy11132 8 VPPKLSPTNPERT--LNVGERASLICSITKGD--I-PLTIKWLKDGRYLDNSAALSITHV----DQYNSMLVIDSVSARH 78 (243)
Q Consensus 8 ~~p~~~~~~~~~~--~~~g~~~~l~C~~~~~~--~-~~~v~W~~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~d 78 (243)
.+|.+...+.... +.+|++++|.|.+.+.. + .+.+.|+|++..+........... -.....|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 4566655555544 78999999999997432 3 379999999987654321111000 0124579999999999
Q ss_pred CeeEEEEEEeCCCcc--eeEEEE--EEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCe
Q psy11132 79 SGNYSCTVRNMVAED--TQVQRL--IVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~~--~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~ 153 (243)
+|.|+|.+.+..+.. ...+.+ .+..+|.+...+.. .....|+.+.|.|.+.+.+|++ .+.|+++|..+......
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 166 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPP-AEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDT 166 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCC-GGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCC-hHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceec
Confidence 999999999876643 222211 33445555443332 2223599999999995336754 99999999987532111
Q ss_pred eEE-eecc---ceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 154 NVS-DLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 154 ~~~-~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
... ..++ ..+.|.+.....+|.|.|+|.|.|....
T Consensus 167 ~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 167 APVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred ccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 111 1111 1234555555555689999999998754
No 181
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.87 E-value=4.3e-22 Score=146.16 Aligned_cols=179 Identities=18% Similarity=0.260 Sum_probs=116.0
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceee------------cCC----CceEEEEeeeeceEEEE
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYL------------DNS----AALSITHVDQYNSMLVI 71 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~------------~~~----~~~~~~~~~~~~~~l~i 71 (243)
+.+...+....+.+|++++|.|.+. .+.+.+.|+|. +... ... .++.+........+|.|
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~--~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI--SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB--TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC--CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 4555556678899999999999984 46679999982 2211 111 34444332233678999
Q ss_pred eecCCCCCeeEEEEEEeC--CCcceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEe
Q psy11132 72 DSVSARHSGNYSCTVRNM--VAEDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLK 142 (243)
Q Consensus 72 ~~~~~~d~G~Y~C~~~~~--~~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~ 142 (243)
.+++.+|+|.|.|.+.+. .........|.|.. +|.+.........+..|+.++|.|.+.+..|++ .+.|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999974 22333445677765 333322222212344589999999996435544 899999
Q ss_pred CCEecCCCCCeeEE-------eecc---ceeEEEEeecCCCC-CeeEEEEEEccCccee
Q psy11132 143 DGKPLSPRFPVNVS-------DLDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQAR 190 (243)
Q Consensus 143 ~~~~~~~~~~~~~~-------~~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~ 190 (243)
+|..+......... ..++ ..+.|.+.....+| +|.|+|.|.|......
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~~ 243 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 243 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCCC
Confidence 99888653211100 0011 12557787777777 9999999999876543
No 182
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.87 E-value=2.2e-21 Score=140.07 Aligned_cols=170 Identities=16% Similarity=0.244 Sum_probs=113.7
Q ss_pred cCCCCCcccccCCeEEEEEEeeCCCC----CceeEEEECC--eee---c---------CCCceEEEEeeeeceEEEEeec
Q psy11132 13 SPTNPERTLNVGERASLICSITKGDI----PLTIKWLKDG--RYL---D---------NSAALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~~~----~~~v~W~~~~--~~~---~---------~~~~~~~~~~~~~~~~l~i~~~ 74 (243)
...+....+.+|++++|.|.+. +.+ .+.+.|+|++ ..+ . ...++.+.. .....+|.|.++
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 82 (240)
T 1moe_A 5 TQSPASLAVSLGQRATMSCRAG-ESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SRTDFTLIIDPV 82 (240)
T ss_dssp EEECSEEEECTTSCEEEEEEES-SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSC
T ss_pred EeeCCeEEecCCCCEEEEEeCC-CccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe-cCCeEEEEEcCC
Confidence 3345566789999999999995 655 6799999952 211 0 123444432 223458999999
Q ss_pred CCCCCeeEEEEEEeCCCc-ceeEEEEEEEcCCC-----ccccccCCCCCCCCCcEEEEEEeecCCC--CCEEEEEeC--C
Q psy11132 75 SARHSGNYSCTVRNMVAE-DTQVQRLIVNVPPK-----IESFAFPFDGLPEGARTRVICGVTHGDP--PLTIRWLKD--G 144 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p~-----~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~--~ 144 (243)
+.+|+|.|+|.+.+..+. ......|.|..++. +.........+.+|+++.|.|.+. +.| .+.+.|+++ +
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~~~v~W~k~~~g 161 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTAS-GFNIKDTYMHWVKQRPE 161 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTT
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEc-CccCCCCEEEEEEECCC
Confidence 999999999999987554 34456777766432 222222234578899999999994 665 469999995 2
Q ss_pred EecC-----------------CCCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 145 KPLS-----------------PRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 145 ~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
..+. ...+...... ......|.|.+++.+|+|.|.|.|.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 162 QGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp SCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred CCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 2210 0111222211 133467999999999999999999853
No 183
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.87 E-value=2.3e-21 Score=141.08 Aligned_cols=180 Identities=18% Similarity=0.222 Sum_probs=117.4
Q ss_pred CCCcccccCCeEEEEEEeeCCCC--CceeEEEEC--Ceeec-----------------CCCceEEEEee-eeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI--PLTIKWLKD--GRYLD-----------------NSAALSITHVD-QYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~~-~~~~~l~i~~ 73 (243)
+....+.+|++++|.|.+. +.+ .+.+.|+|. +..+. ...++.+.... ....+|.|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~-g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTAS-GFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp CCCEEECTTCCEEEEEEEC-SSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEee-CCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 4566788999999999985 433 568999982 21110 11334333221 2245799999
Q ss_pred cCCCCCeeEEEEEEeCCCcc-eeEEEEEEEcC---------------CCccccccCCCCCCCCCcEEEEEEeecCCCCC-
Q psy11132 74 VSARHSGNYSCTVRNMVAED-TQVQRLIVNVP---------------PKIESFAFPFDGLPEGARTRVICGVTHGDPPL- 136 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~---------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~- 136 (243)
++.+|+|.|.|.+.+..+.. .....|.|... +.+...+ ....+.+|+++.|.|.+ .+.+.+
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~-~~~~~~~ 164 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP-ASLAVSLGQRATISCRA-SENVDRY 164 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC-SEEEECTTSCEEEEEEE-SSCCEET
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC-CeEEEeCCCCEEEEEEe-cCccccC
Confidence 99999999999998855442 34556676642 2222221 22457889999999999 577765
Q ss_pred ---EEEEEeCC--EecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEE
Q psy11132 137 ---TIRWLKDG--KPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 198 (243)
Q Consensus 137 ---~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~ 198 (243)
.+.|++++ .... ...+... ........|.|.+++.+|+|.|.|.|.|..+... ....|.|.
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSG-SGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEE-EEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEE-eCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 89999842 2111 0111221 1223356799999999999999999999765443 34667776
Q ss_pred e
Q psy11132 199 G 199 (243)
Q Consensus 199 ~ 199 (243)
+
T Consensus 244 ~ 244 (253)
T 3uzq_A 244 R 244 (253)
T ss_dssp C
T ss_pred C
Confidence 4
No 184
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.87 E-value=3.3e-21 Score=140.52 Aligned_cols=177 Identities=13% Similarity=0.158 Sum_probs=116.1
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCC-CCCceeEEEECC--eeec-----------------CCCceEEEEee-eece
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKG-DIPLTIKWLKDG--RYLD-----------------NSAALSITHVD-QYNS 67 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~~~-----------------~~~~~~~~~~~-~~~~ 67 (243)
+|.+...+..+.+.+|++++|.|.+.+. .+.+.+.|+|.. ..+. ...++.+.... ....
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 4566666778889999999999999642 256689999742 1110 01244433211 2246
Q ss_pred EEEEeecCCCCCeeEEEEEEeC------------CCcceeEEEEEEEcCCC--------------ccccccCCCCCCCCC
Q psy11132 68 MLVIDSVSARHSGNYSCTVRNM------------VAEDTQVQRLIVNVPPK--------------IESFAFPFDGLPEGA 121 (243)
Q Consensus 68 ~l~i~~~~~~d~G~Y~C~~~~~------------~~~~~~~~~l~v~~~p~--------------~~~~~~~~~~~~~g~ 121 (243)
+|+|.+++.+|+|.|.|.+.+. .........|.|...+. ..........+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 7999999999999999999886 22233455677765422 111112224578899
Q ss_pred cEEEEEEeecCCCC-CEEEEEeC--CEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 122 RTRVICGVTHGDPP-LTIRWLKD--GKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 122 ~~~l~C~~~~~~p~-~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
+++|.|.+ .+.+. +.+.|++. +..+. ...+.... .......|.|.+++.+|+|.|.|.|.|..
T Consensus 166 ~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 166 RATFSCRS-SHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGS-GSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp CEEEEEEE-SSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CEEEEEEE-CCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEE-ccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 99999999 46665 89999983 22111 11122221 22335679999999999999999999865
Q ss_pred c
Q psy11132 187 A 187 (243)
Q Consensus 187 g 187 (243)
+
T Consensus 244 ~ 244 (256)
T 3juy_B 244 S 244 (256)
T ss_dssp C
T ss_pred C
Confidence 4
No 185
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.87 E-value=8.3e-21 Score=137.22 Aligned_cols=184 Identities=16% Similarity=0.217 Sum_probs=116.7
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---ec--------------CCCceEEEEee-eeceEEE
Q psy11132 12 LSPTNPERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---LD--------------NSAALSITHVD-QYNSMLV 70 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~~--------------~~~~~~~~~~~-~~~~~l~ 70 (243)
+...+..+.+.+|++++|.|.+... .+.+.+.|+|+. .. +. ...++.+.... ....+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4445666779999999999999642 155689999843 21 10 12344433221 1357899
Q ss_pred EeecCCCCCeeEEEEEEeCCC-----c--ceeEEEEEEEcC-------CCccccccCCCCCCCCCcEEEEEEeecCCCC-
Q psy11132 71 IDSVSARHSGNYSCTVRNMVA-----E--DTQVQRLIVNVP-------PKIESFAFPFDGLPEGARTRVICGVTHGDPP- 135 (243)
Q Consensus 71 i~~~~~~d~G~Y~C~~~~~~~-----~--~~~~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~- 135 (243)
|.+++.+|+|.|.|.+.+... . ......|.|... |.+.........+..|+.+.|.|.+.+..|.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~ 163 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDV 163 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCC
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCC
Confidence 999999999999999987531 1 123457777753 3222222221334579999999999644464
Q ss_pred CEEEEEeCCE-ecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 136 LTIRWLKDGK-PLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 136 ~~~~W~~~~~-~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
+.+.|++++. .+...........++ ..+.|.|..... + |.|+|.|.|..+.......+.+
T Consensus 164 ~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 164 IKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred eEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 7999999987 554321100111111 135678876654 4 9999999999887665555544
No 186
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.87 E-value=6.3e-21 Score=135.40 Aligned_cols=177 Identities=18% Similarity=0.230 Sum_probs=105.9
Q ss_pred CCCcccccCCeEEEEEEeeC-CCCCceeEEEECC--ee---e-------------cCCCceEEEEeeeeceEEEEeecCC
Q psy11132 16 NPERTLNVGERASLICSITK-GDIPLTIKWLKDG--RY---L-------------DNSAALSITHVDQYNSMLVIDSVSA 76 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~-~~~~~~v~W~~~~--~~---~-------------~~~~~~~~~~~~~~~~~l~i~~~~~ 76 (243)
+....+.+|++++|.|.+.+ ..+.+.+.|+|.. .. + ....++.+.. .....+|.|.+++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-TSTTVDLKITSPTT 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-CSSEEEEEESSCCG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-eCCEEEEEECCCCc
Confidence 34566889999999999963 2335689999742 11 1 0123444433 33356899999999
Q ss_pred CCCeeEEEEEEeCCCc----ceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEec
Q psy11132 77 RHSGNYSCTVRNMVAE----DTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPL 147 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~ 147 (243)
+|+|.|.|.+.+..+. ......|.|. .+|.+...... ..+..|+.+.|.|.+.++.| .+.+.|++++..+
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 163 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPC-CGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTN 163 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCC-TTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCC-ccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEEC
Confidence 9999999999987542 2334566775 23333322222 45668999999999964444 4578899998755
Q ss_pred CCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 148 SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
...........++.........+...| |.|+|.|.|..+.......+
T Consensus 164 ~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 164 GVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp TEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred CeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 322111111111111221223456667 99999999998876554444
No 187
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.87 E-value=1.6e-20 Score=131.02 Aligned_cols=158 Identities=18% Similarity=0.233 Sum_probs=114.1
Q ss_pred cccccCCeEEEEEEeeCCCCCc--eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeE
Q psy11132 19 RTLNVGERASLICSITKGDIPL--TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQV 96 (243)
Q Consensus 19 ~~~~~g~~~~l~C~~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 96 (243)
+.+.+|++++|.|.+ +.|.+ .|.|++.+..+ .+... ......|.|.+++.+|+|.|.|.+.+..+.....
T Consensus 17 v~v~~G~sv~L~C~a--~~p~P~~~i~W~~~~~~l---~~~~~---~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~ 88 (210)
T 1gsm_A 17 VAVALGASRQLTCRL--ACADRGASVQWRGLDTSL---GAVQS---DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHT 88 (210)
T ss_dssp EEEETTCCEEEEEEE--CCSSTTCEEEEESSTTTT---CCEEE---ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eEEeCCCCEEEEEEC--CCCCCCcceEEeeccccc---CcEEe---cCCccEEEECccCcccCceEEEEEEeCCCceEEE
Confidence 578999999999998 45555 99999865444 11111 1235789999999999999999999988888888
Q ss_pred EEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC----CEEEEEeCCEecCCCCC-e-eEE---------e--ec
Q psy11132 97 QRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP----LTIRWLKDGKPLSPRFP-V-NVS---------D--LD 159 (243)
Q Consensus 97 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~----~~~~W~~~~~~~~~~~~-~-~~~---------~--~~ 159 (243)
+.|.|..+|....... ..+..|+.. |.|.+.++.|. +++.|++++..+..... . ... . .-
T Consensus 89 ~~ltV~~~P~~~~i~~--~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (210)
T 1gsm_A 89 VQLLVYAFPNQLTVSP--AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLF 165 (210)
T ss_dssp EEEEEEBCCSEEEEES--SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCE
T ss_pred EEEEEEecCCCcEEcc--ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEE
Confidence 9999999887665442 356678888 99999655574 48999999999865421 1 110 0 01
Q ss_pred cceeEEEEeecCCCCCeeEEEEEEccCc
Q psy11132 160 SFSSLLSINSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 160 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g 187 (243)
..++.+.+.....++.+.|+|.|.+..-
T Consensus 166 ~vts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 166 RVTERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp EEEEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred EEEEEEeecCCcccCCceEEEEEEeeCC
Confidence 1124455555555666899999999764
No 188
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.87 E-value=2.6e-20 Score=132.94 Aligned_cols=174 Identities=14% Similarity=0.199 Sum_probs=112.9
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--ee---ec--------------CCCceEEEEe-eeeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RY---LD--------------NSAALSITHV-DQYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~---~~--------------~~~~~~~~~~-~~~~~~l~i~~~~ 75 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|.. .. +. ...++.+... .....+|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAAS-GFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEcCCCcEEEEEEec-CcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 45688999999999996 433 4689999853 11 10 1234443322 1224689999999
Q ss_pred CCCCeeEEEEEEeCCC------cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEe-C
Q psy11132 76 ARHSGNYSCTVRNMVA------EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLK-D 143 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~-~ 143 (243)
.+|+|.|.|.+.+..+ .......|.|.. +|.+.... +...+..|+.+.|.|.+.+..|.+ .+.|++ +
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~-~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLV-SCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEE-CTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEec-CCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 9999999999998642 112335677763 23332222 123457899999999996444766 999999 8
Q ss_pred CEecCCCCCee-EEeecc--ceeEEEEeecCC--CCCeeEEEEEEccCcceeeeE
Q psy11132 144 GKPLSPRFPVN-VSDLDS--FSSLLSINSVSA--AHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 144 ~~~~~~~~~~~-~~~~~~--~~~~l~i~~~~~--~d~g~y~C~~~n~~g~~~~~~ 193 (243)
|..+....... ...... ..+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp SCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 88775410000 001111 135678877766 788999999999988765443
No 189
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.87 E-value=4.9e-21 Score=139.57 Aligned_cols=177 Identities=17% Similarity=0.258 Sum_probs=116.5
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEee-eeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
...+.+|++++|.|.+. +.+ .+.+.|++.. ..+. ...++.+.... .....|.|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 11 LELVKPGASVKISCKTS-GYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred ceEEcCCCCEEEEEEEe-cccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 45588999999999986 544 5689999832 1110 12334333221 234679999999
Q ss_pred CCCCeeEEEEEEeC----CCcceeEEEEEEEc----------------CCCccccccCCCCCCCCCcEEEEEEeecCCCC
Q psy11132 76 ARHSGNYSCTVRNM----VAEDTQVQRLIVNV----------------PPKIESFAFPFDGLPEGARTRVICGVTHGDPP 135 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 135 (243)
.+|+|.|.|.+.+. .........|.|.. ++.+...+ ....+.+|++++|.|.+ .+.+.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~-~~~~~ 167 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP-SSLSASLGERVSITCRA-SQDIG 167 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC-SEEEECTTCCEEEEEEE-SSCCT
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC-CeEEEECCCCEEEEEEE-ecCCC
Confidence 99999999999876 22233446677764 22222222 22457899999999999 57888
Q ss_pred CEEEEEeCC--EecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEE
Q psy11132 136 LTIRWLKDG--KPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 198 (243)
Q Consensus 136 ~~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~ 198 (243)
+.+.|++.. ..+. ...+... ........|.|.+++.+|+|.|.|.|.|..+... ....|.|.
T Consensus 168 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 168 SNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSG-SRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp TCEEEEEECTTCCEEEEEETTTEECTTSCTTEEE-EEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred cEEEEEEECCCCCcEEEEEeccccCCccCCCEEE-ecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEE
Confidence 899999842 1111 0112222 1233456799999999999999999998655432 34677776
No 190
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.87 E-value=6.3e-22 Score=135.33 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=108.0
Q ss_pred CcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC------------CceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 18 ERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS------------AALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.+.+.+|++|+|.|.+. . |.+.|.|++++..+... .+..+ ...+.+|.|.+++.+|+|.|+|.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~---~~~~~sL~I~~v~~~DsG~Y~C~ 78 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-V-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL---DTVSGSLTIYNLTSSDEDEYEME 78 (171)
T ss_dssp EEEEETTCCEEECCCCS-S-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE---CTTTCCEEECSCCGGGCEEEEEE
T ss_pred EEEEEcCCCEEEcCCCC-C-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEE---eCCCCeEEECCCChhhCceEEEE
Confidence 45678999999999983 4 77799999988643210 11111 11357899999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEE
Q psy11132 86 VRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 165 (243)
+.+..+ ...+.|.|..++..+....... . ..|.|.+ .+.|.+.+.|++++..+.... ...+
T Consensus 79 ~~n~~~--~~~~~L~V~~~~~~p~i~~~~~---~---~~L~C~~-~~~p~p~i~W~~~~~~l~~~~----------~~~l 139 (171)
T 1ccz_A 79 SPNITD--TMKFFLYVLEMVSKPMIYWECS---N---ATLTCEV-LEGTDVELKLYQGKEHLRSLR----------QKTM 139 (171)
T ss_dssp CTTCCS--CEEEEEEEECCCCCCEEEEETT---T---TEEEEEC-SSCSSCEEEEEETTEEEEEES----------SSEE
T ss_pred EeCCCC--cEEEEEEEECcCCCCEEEEecC---C---cEEEEEe-CCCCCcEEEEEECCEECcCCc----------ceEE
Confidence 987766 6778888887654332221101 1 2799999 577889999999998775321 1223
Q ss_pred EEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
.+. ..+|+|.|+|.|.|..+.....+.+
T Consensus 140 ~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 140 SYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 333 3678999999999999987766554
No 191
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.87 E-value=4.3e-21 Score=136.76 Aligned_cols=174 Identities=18% Similarity=0.252 Sum_probs=112.5
Q ss_pred CCcccccCCeEEEEEEeeCCCC--CceeEEEECC--ee---ec---C-------------CCceEEEEee-eeceEEEEe
Q psy11132 17 PERTLNVGERASLICSITKGDI--PLTIKWLKDG--RY---LD---N-------------SAALSITHVD-QYNSMLVID 72 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~---~~---~-------------~~~~~~~~~~-~~~~~l~i~ 72 (243)
....+.+|++++|.|.+. +.+ .+.+.|+|++ .. +. . ..++.+.... ....+|.|.
T Consensus 8 ~~~~~~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVAS-GFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp CCEEECTTCCEEEEEEEE-SSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred CCEEEcCCCeEEEEEEEc-CCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 345688999999999996 444 5799999853 21 10 0 2344433221 224589999
Q ss_pred ecCCCCCeeEEEEEEeCCCcc---eeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCC
Q psy11132 73 SVSARHSGNYSCTVRNMVAED---TQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDG 144 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~~~~---~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~ 144 (243)
+++.+|+|.|.|.+.+..+.. .....|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPG-CSDTSGSSVTLGCLVKGYFPEPVTVKWNYGA 165 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-SCCSCSSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccc-cccCCCCcEEEEEEEEEEeCCCeEEEEecCC
Confidence 999999999999999865321 1345667653 2333222222 3467899999999996444877 99999987
Q ss_pred EecC--CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 145 KPLS--PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 145 ~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
.... ..............+.|.|..+..++ |.|+|.|.|..|...+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 166 LSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 6421 00000000011124678898888766 999999999999765544
No 192
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.87 E-value=1.2e-21 Score=141.90 Aligned_cols=176 Identities=19% Similarity=0.263 Sum_probs=114.4
Q ss_pred CCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee--------------cCCCceEEEEeeeeceEEEEeecCCCC
Q psy11132 15 TNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL--------------DNSAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 15 ~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~--------------~~~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
.+..+.+.+|+.++|.|.+. +.+.+.+.|+|.. ... ....++.+........+|.|.+++.+|
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D 85 (245)
T 3nfj_J 7 WPATLVQPVGSPLSLECTVE-GTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSD 85 (245)
T ss_dssp ECSEEEEETTCCEEEEEEEE-SCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGG
T ss_pred CCceEEecCCCCEEEEEEec-CCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhh
Confidence 35567789999999999996 6677899999822 110 012344443323345789999999999
Q ss_pred CeeEEEEEEeCCC------cceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCE
Q psy11132 79 SGNYSCTVRNMVA------EDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGK 145 (243)
Q Consensus 79 ~G~Y~C~~~~~~~------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~ 145 (243)
+|.|.|.+.+..+ .......|.|.. +|.+.........+..|+.+.|.|.+.+..|++ .+.|+++|.
T Consensus 86 ~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 165 (245)
T 3nfj_J 86 SGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGK 165 (245)
T ss_dssp CEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred CEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCE
Confidence 9999999998322 223345677765 333322222212234589999999995435544 899999999
Q ss_pred ecCCCCCeeEEe-------ecc---ceeEEEEeecCCCC-CeeEEEEEEccCcceee
Q psy11132 146 PLSPRFPVNVSD-------LDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQARY 191 (243)
Q Consensus 146 ~~~~~~~~~~~~-------~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~~ 191 (243)
.+.......... .++ ..+.|.|.....+| .|.|+|.|.|.......
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~~ 222 (245)
T 3nfj_J 166 EVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEND 222 (245)
T ss_dssp EECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSSS
T ss_pred ECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCcc
Confidence 887542211000 111 12568888777777 67999999998765543
No 193
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.87 E-value=2.6e-21 Score=138.50 Aligned_cols=180 Identities=19% Similarity=0.275 Sum_probs=111.5
Q ss_pred CCCcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~ 73 (243)
+....+.+|++++|.|.+. +.+ .+.+.|+|++ ..+. ...++.+... .....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKAS-GYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CSEEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeEEcCCCCEEEEEEec-CCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 3445688999999999996 444 5689999853 2110 0234443322 12357899999
Q ss_pred cCCCCCeeEEEEEEeCCCc-ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEec
Q psy11132 74 VSARHSGNYSCTVRNMVAE-DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPL 147 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~ 147 (243)
++.+|+|.|.|.+.+.... ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++++..+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 9999999999999875321 12334677764 2322222211 3456799999999996445765 99999998764
Q ss_pred CCC-CCeeEE-eeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 148 SPR-FPVNVS-DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 148 ~~~-~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
... ...... ......+.|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 165 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp TEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 311 000111 001124578898888877 99999999987766555555555
No 194
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.87 E-value=5.8e-21 Score=138.03 Aligned_cols=171 Identities=18% Similarity=0.200 Sum_probs=111.7
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--ee---ec---------CCCceEEEEeeeeceEEEEeecCCC
Q psy11132 12 LSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RY---LD---------NSAALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~---~~---------~~~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+...+....+.+|++++|.|.+. +.+.+.+.|+|+. .. +. ...++.... .....+|.|.+++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRAS-QSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETE 81 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEES-SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGG
T ss_pred EEEcCCeEEEcCCCcEEEEEEeC-CCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec-CCCEEEEEECCCChH
Confidence 33445567789999999999995 6677899999853 11 10 123444332 223568999999999
Q ss_pred CCeeEEEEEEeCCCc-ceeEEEEEEEcCCC------------ccccccCCCCCCCCCcEEEEEEeecCCC--CCEEEEEe
Q psy11132 78 HSGNYSCTVRNMVAE-DTQVQRLIVNVPPK------------IESFAFPFDGLPEGARTRVICGVTHGDP--PLTIRWLK 142 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p~------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~ 142 (243)
|+|.|.|.+.+..+. ......|.|..+|. +.........+.+|+++.|.|.+. +.+ .+.+.|++
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-g~~~~~~~v~W~k 160 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVT-GDSITSDYXSXIR 160 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEE-SSCGGGSCEEEEE
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEE-ccccCCcceeeEe
Confidence 999999999886542 22345677766542 111111224578999999999994 655 57899998
Q ss_pred CC--EecC-------C---------CCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 143 DG--KPLS-------P---------RFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 143 ~~--~~~~-------~---------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
++ ..+. . ..+...... ......|.|.+++.+|+|.|.|.|.|.
T Consensus 161 ~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 161 KFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp ECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 42 2210 0 111222211 223468999999999999999999984
No 195
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.87 E-value=3.4e-23 Score=148.91 Aligned_cols=176 Identities=16% Similarity=0.289 Sum_probs=94.9
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCe--ee------------cCCCceEEEEeeeeceEEEEeecC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGR--YL------------DNSAALSITHVDQYNSMLVIDSVS 75 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~~l~i~~~~ 75 (243)
+.+...+....+.+|++++|.|.+. +.+.+.+.|+|++. .+ ....++.... .....+|.|.+++
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 101 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITS-TDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENML 101 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEE-EEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC-----
T ss_pred eeEEEcCCeEEEecCCCEEEEEecC-CcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCCC
Confidence 4444446677899999999999986 55556899998532 11 0012222222 2235689999999
Q ss_pred CCCCeeEEEEEEeCCCc-ceeEEEEEEEc---CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCC
Q psy11132 76 ARHSGNYSCTVRNMVAE-DTQVQRLIVNV---PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPR 150 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~ 150 (243)
.+|+|.|.|.+.+..+. ......|.|.. +|.+...... .....|+.+.|.|.+.+..|++ .+.|+++|..+...
T Consensus 102 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 102 SEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred HHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCC-HHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 99999999999876543 22223455554 3333322211 1223689999999996435543 89999999877654
Q ss_pred -CCee-EEe-ec---cceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 151 -FPVN-VSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 151 -~~~~-~~~-~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
.... ... .+ ...+.|.|.....+|+|.|+|.|.|....
T Consensus 181 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 181 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred ceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 1100 000 11 12356889988889999999999997654
No 196
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.86 E-value=2.6e-21 Score=136.58 Aligned_cols=167 Identities=14% Similarity=0.228 Sum_probs=107.7
Q ss_pred cccCCeEEEEEEeeCCC--C-CceeEEEECCeeecCCCce---EEEE-eeeeceEEEEeecCCCCCeeEEEEEEeCCCcc
Q psy11132 21 LNVGERASLICSITKGD--I-PLTIKWLKDGRYLDNSAAL---SITH-VDQYNSMLVIDSVSARHSGNYSCTVRNMVAED 93 (243)
Q Consensus 21 ~~~g~~~~l~C~~~~~~--~-~~~v~W~~~~~~~~~~~~~---~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 93 (243)
+.+|++++|.|.+.+.. | .+.+.|+|++..+...... .... .-.....|.|.+++.+|+|.|+|.+.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 78999999999996332 3 3599999999776432100 0000 00123579999999999999999999887753
Q ss_pred e--eEEEE--EEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCee-EEeecc---ceeE
Q psy11132 94 T--QVQRL--IVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN-VSDLDS---FSSL 164 (243)
Q Consensus 94 ~--~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~~-~~~~~~---~~~~ 164 (243)
. ..+.+ .+..+|.+...... .....|+.+.|.|.+.+.+|+ +.+.|+++|..+....... ....++ ..+.
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~ 173 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPP-KEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSK 173 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCC-TGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCC-HHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEE
Confidence 2 22322 33445655443332 222359999999999644565 5999999999875432111 111111 1234
Q ss_pred EEEeecCCCCCeeEEEEEEccCcc
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
|.+.....+|.|.|+|.|.|....
T Consensus 174 l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 174 LNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEECHHHcCCCCEEEEEEECCCCC
Confidence 666666667899999999998653
No 197
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.86 E-value=5.1e-21 Score=135.87 Aligned_cols=183 Identities=21% Similarity=0.274 Sum_probs=131.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC--ceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA--ALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.||.+. .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+... .....|.|.+++.+|.|.|+|.
T Consensus 18 ~~P~~~-~p~~~~~~~G~~v~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 18 YAPKLQ-GPVAVYTWEGNQVNITCEVF-AYPSATISWFRDGQLLPSSNYSNIKIYNT-PSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEEEEE-CCSEEEECTTCCEEEEEEEE-EESCCEEEEEETTEESSCSSSCSEEEEEE-TTEEEEEECCCSGGGCEEEEEE
T ss_pred cCCccc-CCceEEEECCCCEEEEEEEe-ecCCCEEEEEECCeECCCCCCccEEEecC-CCeeEEEEecCChhhCeEEEEE
Confidence 467773 55568899999999999995 77888999999999987653 3333322 2357899999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEee---cCCCCC--EEEEEeCCEecCCCCCeeEE-eec
Q psy11132 86 VRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVT---HGDPPL--TIRWLKDGKPLSPRFPVNVS-DLD 159 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~---~~~p~~--~~~W~~~~~~~~~~~~~~~~-~~~ 159 (243)
+.|..+.....+.|.|..+|..+..... ...+..+.|.|... .+.|.. .+.|.+++...-.. .... ...
T Consensus 95 a~n~~g~~~~~~~l~v~~~P~~p~~~~~---~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~--~~~~~~~~ 169 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQADTPSSPSIDQV---EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS--KWYDAKEA 169 (215)
T ss_dssp EECSSCEEEEEEEEEECCCCCCCEEEEE---EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEE--EEEEHHHH
T ss_pred EEECCCceEEEEEEEECCCCCCCcceEE---EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccc--cccccccc
Confidence 9999998888888888877765432211 13467788998742 233333 47788776531110 0000 001
Q ss_pred cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 160 SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 160 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.....+.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 112679999999999999999999999988777666666
No 198
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.86 E-value=1.1e-20 Score=137.62 Aligned_cols=168 Identities=18% Similarity=0.240 Sum_probs=109.5
Q ss_pred CCCcccccCCeEEEEEEeeCCC--CCceeEEEECC--eeec------------CCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 16 NPERTLNVGERASLICSITKGD--IPLTIKWLKDG--RYLD------------NSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~--~~~~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
+....+.+|++++|.|.+. +. +.+.+.|+|++ .... ...++.... .....+|.|.+++.+|+
T Consensus 9 p~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGS-SSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK-SGTSASLAITGLQSEDE 86 (256)
T ss_dssp CSEEEECTTCCEEEEEECC-TTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGC
T ss_pred CCcEEEcCCCcEEEEEecC-CCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc-cCCEEEEEECCCChhhC
Confidence 3456789999999999995 44 66799999842 1110 123444332 22356899999999999
Q ss_pred eeEEEEEEeCCCc---ceeEEEEEEEcCCCc-------------------cccccCCCCCCCCCcEEEEEEeecCCC--C
Q psy11132 80 GNYSCTVRNMVAE---DTQVQRLIVNVPPKI-------------------ESFAFPFDGLPEGARTRVICGVTHGDP--P 135 (243)
Q Consensus 80 G~Y~C~~~~~~~~---~~~~~~l~v~~~p~~-------------------~~~~~~~~~~~~g~~~~l~C~~~~~~p--~ 135 (243)
|.|.|.+.+..+. ......|.|..++.. .........+.+|+++.|.|.+. +.+ .
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~ 165 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAAS-GFTFSS 165 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEE-SSCGGG
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEe-CCcccc
Confidence 9999999986542 234456777654421 11111223477899999999994 655 7
Q ss_pred CEEEEEeCC--Eec------CC-----------CCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 136 LTIRWLKDG--KPL------SP-----------RFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 136 ~~~~W~~~~--~~~------~~-----------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
+.+.|++++ ..+ .. ..+...... ......|.|.+++.+|+|.|.|.|.|..
T Consensus 166 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 166 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp SEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 899999862 211 00 012222211 1335679999999999999999999964
No 199
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.86 E-value=1e-20 Score=137.12 Aligned_cols=169 Identities=17% Similarity=0.235 Sum_probs=110.6
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCC-----CceeEEEECC--eee---c---------CCCceEEEEeeeeceEEEEeec
Q psy11132 14 PTNPERTLNVGERASLICSITKGDI-----PLTIKWLKDG--RYL---D---------NSAALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~-----~~~v~W~~~~--~~~---~---------~~~~~~~~~~~~~~~~l~i~~~ 74 (243)
..+..+.+.+|++++|.|.+. +.+ .+.+.|+|+. ..+ . ...++.... ......|.|.++
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 83 (247)
T 1svz_A 6 QTPLYLPVSLGDQASISCRSS-QTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG-SGTDFTLKISRV 83 (247)
T ss_dssp EECSEEEECTTCCEEEEEEES-SCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSC
T ss_pred ecCCeEEecCCCCEEEEEeCC-CcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc-CCCEEEEEECCC
Confidence 335567789999999999995 555 5799999843 211 1 123444332 223468999999
Q ss_pred CCCCCeeEEEEEEeCCCc-ceeEEEEEEEcCC------------CccccccCCCCCCCCCcEEEEEEeecCCC--CCEEE
Q psy11132 75 SARHSGNYSCTVRNMVAE-DTQVQRLIVNVPP------------KIESFAFPFDGLPEGARTRVICGVTHGDP--PLTIR 139 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~ 139 (243)
+.+|+|.|.|.+.+..+. ......|.|..++ .+.........+.+|++++|.|.+. +.+ .+.+.
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~~~v~ 162 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKAT-NYAFTDYSMH 162 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEE-SSCGGGSCEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEc-CcccCCcEEE
Confidence 999999999999886543 2234567776543 1111122223478999999999995 553 57999
Q ss_pred EEeCC--Eec------CC-----------CCCeeEEe-eccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 140 WLKDG--KPL------SP-----------RFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 140 W~~~~--~~~------~~-----------~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
|++++ ..+ .. ..+..... .......|.|.+++.+|+|.|.|.|.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99853 111 00 11222221 1233578999999999999999999995
No 200
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.86 E-value=1.5e-20 Score=137.13 Aligned_cols=181 Identities=18% Similarity=0.216 Sum_probs=114.3
Q ss_pred CCCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e-------------cCCCceEEEEee-eeceEEEEeecC
Q psy11132 16 NPERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L-------------DNSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~-------------~~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
+....+.+|++++|.|.+.+. .+.+.+.|+|.. .. + ....++.+.... ....+|.|.+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 455668999999999999642 346799999832 11 1 012334433221 234589999999
Q ss_pred CCCCeeEEEEEEeCCC----cceeEEEEEEEcC------------CCccccc-cCCCCCCCCCcEEEEEEeecCCCCC-E
Q psy11132 76 ARHSGNYSCTVRNMVA----EDTQVQRLIVNVP------------PKIESFA-FPFDGLPEGARTRVICGVTHGDPPL-T 137 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~------------p~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~-~ 137 (243)
.+|+|.|.|.+.+..+ .......|.|..+ +...... .....+.+|++++|.|.+ .+.+.+ .
T Consensus 95 ~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~ 173 (257)
T 3gkz_A 95 SEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSA-SSSVSSSH 173 (257)
T ss_dssp GGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEE-SSCCCGGG
T ss_pred hhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEE-ccCccceE
Confidence 9999999999998622 1233456777654 1111111 112457789999999999 567766 9
Q ss_pred EEEEeC--CEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEE
Q psy11132 138 IRWLKD--GKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 198 (243)
Q Consensus 138 ~~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~ 198 (243)
+.|++. +..+. ...+... ........|.|.+++.+|+|.|.|.|.+...... .-..|.|.
T Consensus 174 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 174 LYWYQQKPGSSPKLWIYSTSNLASGVPARFSG-SGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEE-EEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEccccCCCcCCCEEE-ecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEE
Confidence 999983 22111 0011211 1223356799999999999999999998654332 23456665
No 201
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.86 E-value=1.2e-20 Score=139.48 Aligned_cols=180 Identities=16% Similarity=0.235 Sum_probs=118.2
Q ss_pred CCCCcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEe
Q psy11132 15 TNPERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVID 72 (243)
Q Consensus 15 ~~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~ 72 (243)
.+....+.+|++++|.|.+. +.+ .+.+.|+|++ ..+. ...++.+... .....+|.|.
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~-g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTAS-GFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEE-SSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred CCCCEEEeCCCeEEEEEecc-CCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 35577899999999999986 443 4689999954 1110 1234433322 1224789999
Q ss_pred ecCCCCCeeEEEEEEeCCC---c--ceeEEEEEEEcCCC-------------cccc-ccCCCCCCCCCcEEEEEEeecCC
Q psy11132 73 SVSARHSGNYSCTVRNMVA---E--DTQVQRLIVNVPPK-------------IESF-AFPFDGLPEGARTRVICGVTHGD 133 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~~---~--~~~~~~l~v~~~p~-------------~~~~-~~~~~~~~~g~~~~l~C~~~~~~ 133 (243)
+++.+|+|.|.|.+.+..+ . ......|.|..+|. .... .+....+.+|++++|.|.+ .+.
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~ 189 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSA-SSS 189 (282)
T ss_dssp SCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEE-SSC
T ss_pred cCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEe-cCC
Confidence 9999999999999998765 1 12345677776431 1111 1122457899999999999 577
Q ss_pred CCCEEEEEe--CCEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce-eeeEEEEEE
Q psy11132 134 PPLTIRWLK--DGKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA-RYSSKLQVK 198 (243)
Q Consensus 134 p~~~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~~~l~v~ 198 (243)
+ +.+.|++ ++..+. ...++... .......|.|.+++.+|+|.|.|.|.|..+.. .....|.|.
T Consensus 190 ~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 190 V-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGS-GSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp C-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred C-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEe-cCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 7 8999999 554331 01122221 12335689999999999999999999864432 234566666
No 202
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.86 E-value=1.8e-21 Score=140.95 Aligned_cols=179 Identities=20% Similarity=0.300 Sum_probs=115.8
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE--------------CCeeecCC----CceEEEEeeeeceEEEE
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLK--------------DGRYLDNS----AALSITHVDQYNSMLVI 71 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~--------------~~~~~~~~----~~~~~~~~~~~~~~l~i 71 (243)
+.+...+..+.+.+|++++|.|. .+.+.+.+.|+| ++...... .++.+........+|.|
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 80 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNCD--PVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKI 80 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEEE--CCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEE
T ss_pred cceEeCCceEEecCCCCEEEEEE--cCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEE
Confidence 34455566678999999999994 366778999998 22211111 44444432333568999
Q ss_pred eecCCCCCeeEEEEEEeCC----CcceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEE
Q psy11132 72 DSVSARHSGNYSCTVRNMV----AEDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRW 140 (243)
Q Consensus 72 ~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W 140 (243)
.+++.+|+|.|.|.+.+.. ........|.|.. +|.+.........+..|+.+.|.|.+.+..|++ .+.|
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp CSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 9999999999999998532 2233445677763 333322222212344599999999995445654 8999
Q ss_pred EeCCEecCCCCCeeEEe-------ecc---ceeEEEEeecCCCC-CeeEEEEEEccCccee
Q psy11132 141 LKDGKPLSPRFPVNVSD-------LDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQAR 190 (243)
Q Consensus 141 ~~~~~~~~~~~~~~~~~-------~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~ 190 (243)
+++|..+.......... .++ ..+.|.|.....+| .|.|+|.|.|......
T Consensus 161 ~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 99999887542211100 011 12458888877777 8999999999765443
No 203
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.86 E-value=8.3e-21 Score=135.73 Aligned_cols=170 Identities=15% Similarity=0.224 Sum_probs=110.7
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEee-eeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|+. ..+. ...++.+.... ....+|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVS-NFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CEEEETTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEecCCCCEEEEEEec-CcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 45688999999999996 444 5689999853 2110 12344433221 235789999999
Q ss_pred CCCCeeEEEEEEeCCC-----c---ceeEEEEEEEcC----CCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEe
Q psy11132 76 ARHSGNYSCTVRNMVA-----E---DTQVQRLIVNVP----PKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLK 142 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~-----~---~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~ 142 (243)
.+|+|.|.|.+.+..+ . ......|.|... |.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 166 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNS 166 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCC-TTCCCCCEEEEEEEEEEEBSSCCEEECCT
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEeccc-ccccCCCcEEEEEEEEeEECCCeEEEEec
Confidence 9999999999998754 1 123457777752 322222222 3456899999999996444765 999999
Q ss_pred CCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 143 DGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
++..+...........++ ..+.|.|..+..+| |.|+|.|.|..+...
T Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 167 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp TSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred CCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 987542110000111111 13568999888888 999999999766443
No 204
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.86 E-value=1.3e-20 Score=137.97 Aligned_cols=174 Identities=19% Similarity=0.296 Sum_probs=115.7
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCC------CceeEEEEC--Ceeec------------CCCceEEEEeeeeceE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDI------PLTIKWLKD--GRYLD------------NSAALSITHVDQYNSM 68 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~------~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~~ 68 (243)
.+.+...+..+.+.+|++++|.|.+. +.+ .+.+.|+|+ +..+. ...++.... ......
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~ 82 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSS-QTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG-SGTDFT 82 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEES-SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcC-CcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec-CCCEEE
Confidence 44555556677899999999999985 555 578999985 22111 123444432 223568
Q ss_pred EEEeecCCCCCeeEEEEEEeCCCc-ceeEEEEEEEcCC------------------CccccccCCCCCCCCCcEEEEEEe
Q psy11132 69 LVIDSVSARHSGNYSCTVRNMVAE-DTQVQRLIVNVPP------------------KIESFAFPFDGLPEGARTRVICGV 129 (243)
Q Consensus 69 l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p------------------~~~~~~~~~~~~~~g~~~~l~C~~ 129 (243)
|.|.+++.+|+|.|.|.+.+..+. ......|.|..+| .+.........+.+|++++|.|.+
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~ 162 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKA 162 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEE
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEE
Confidence 999999999999999999876542 2234567777653 121111222357899999999999
Q ss_pred ecCCC--CCEEEEEeCC--EecC-------C----------CCCeeEEe-eccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 130 THGDP--PLTIRWLKDG--KPLS-------P----------RFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 130 ~~~~p--~~~~~W~~~~--~~~~-------~----------~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
. +.+ .+.+.|+++. ..+. . ..+..... .......|.|.+++.+|+|.|.|.|.|.
T Consensus 163 ~-~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 163 S-GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp E-SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred e-CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 5 655 3799999863 2110 0 11112211 1223578999999999999999999995
No 205
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.86 E-value=6.2e-21 Score=137.71 Aligned_cols=178 Identities=16% Similarity=0.251 Sum_probs=114.9
Q ss_pred CccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--------------eeec---CCCceEEEEeeeeceEEEEee
Q psy11132 11 KLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--------------RYLD---NSAALSITHVDQYNSMLVIDS 73 (243)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--------------~~~~---~~~~~~~~~~~~~~~~l~i~~ 73 (243)
.+...+..+.+.+|++++|.|.+. + +.+.+.|+|.. .... ...++.+........+|.|.+
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~-~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPI-S-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECC-T-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred ccccCcceeeecCCCcEEEEEEeC-C-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 344445667899999999999984 4 66799999821 1111 113444433233467899999
Q ss_pred cCCCCCeeEEEEEEeCCC---cceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeC
Q psy11132 74 VSARHSGNYSCTVRNMVA---EDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKD 143 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~ 143 (243)
++.+|+|.|.|.+.+... .......|.|.. +|.+.........+..|+.+.|.|.+.+..|.+ .+.|+++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 999999999999983211 223345666663 233222221112344589999999996446655 8999999
Q ss_pred CEecCCCCCee---EEeecc---ceeEEEEeecCCCC-CeeEEEEEEccCccee
Q psy11132 144 GKPLSPRFPVN---VSDLDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQAR 190 (243)
Q Consensus 144 ~~~~~~~~~~~---~~~~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~ 190 (243)
|..+....... ....++ ..+.|.|.....+| .|.|+|.|.|......
T Consensus 162 g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~~ 215 (240)
T 3q5y_A 162 GKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEE 215 (240)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCc
Confidence 99887543211 111111 12458888888888 6799999999865443
No 206
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.86 E-value=1.9e-20 Score=133.34 Aligned_cols=170 Identities=15% Similarity=0.270 Sum_probs=112.3
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--ee---ec--------------CCCceEEEEe-eeeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RY---LD--------------NSAALSITHV-DQYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~---~~--------------~~~~~~~~~~-~~~~~~l~i~~~~ 75 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|.. .. +. ...++.+... .....+|+|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAAS-GFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CeEecCCCcEEEEEEec-CccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 45688999999999996 443 4689999853 11 10 1234444332 1235689999999
Q ss_pred CCCCeeEEEEEEeCCCc---ceeEEEEEEEcC----CCccccccCCCCCCCCCcEEEEEEeecCCCC--CEEEEEeCCEe
Q psy11132 76 ARHSGNYSCTVRNMVAE---DTQVQRLIVNVP----PKIESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKP 146 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~~~~ 146 (243)
.+|+|.|.|.+.+..+. ......|.|... |.+.... ...+..|+.+.|.|.+.+..|. +.+.|++++..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT--LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee--cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 99999999999986442 223456777642 2332222 2346789999999999644476 79999999876
Q ss_pred cCCC-CCeeEEeecc--ceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 147 LSPR-FPVNVSDLDS--FSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 147 ~~~~-~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
+... .......... ..+.|.|.....+|.|.|+|.|.|..+...
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 5210 0000001111 124688888888899999999999988654
No 207
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.86 E-value=1.1e-20 Score=135.39 Aligned_cols=173 Identities=21% Similarity=0.279 Sum_probs=109.1
Q ss_pred CCcccccCCeEEEEEEeeCCCCC----ceeEEEECC--eeec----------------CCCceEEEEee-eeceEEEEee
Q psy11132 17 PERTLNVGERASLICSITKGDIP----LTIKWLKDG--RYLD----------------NSAALSITHVD-QYNSMLVIDS 73 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~----~~v~W~~~~--~~~~----------------~~~~~~~~~~~-~~~~~l~i~~ 73 (243)
....+.+|++++|.|.+. +.+. +.+.|+|+. ..+. ...++.+.... ....+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFS-GFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp CCSEECTTCCEEEEEEEE-SSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CceeecCCCeEEEEEEEe-CcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 345688999999999996 5443 689999842 2110 11334333221 1247899999
Q ss_pred cCCCCCeeEEEEEEeCCC------c---ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEE
Q psy11132 74 VSARHSGNYSCTVRNMVA------E---DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIR 139 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~------~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~ 139 (243)
++.+|+|.|.|.+.+..+ . ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEeccc-ccccCCCCEEEEEEEccEeCCCEEEE
Confidence 999999999999998653 1 11235677763 2333222211 3456899999999996444766 999
Q ss_pred EEeCCEecCCCCCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 140 WLKDGKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 140 W~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
|++++..+............ ...+.|.|..+..++ |.|+|.|.|..+.....
T Consensus 166 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 166 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp EGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 99988754211111111111 124568888887766 99999999998876543
No 208
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.85 E-value=3.6e-20 Score=132.98 Aligned_cols=179 Identities=17% Similarity=0.194 Sum_probs=110.3
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--ee---ec-------------CCCceEEEEe-eeeceEEEEeecCC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RY---LD-------------NSAALSITHV-DQYNSMLVIDSVSA 76 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~---~~-------------~~~~~~~~~~-~~~~~~l~i~~~~~ 76 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|.. .. +. ...++.+... .....+|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAVY-GGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCEECTTSCEEEEEEEE-SSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEEc-cccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 45688999999999986 433 5689999853 21 10 1234444322 12246899999999
Q ss_pred CCCeeEEEEEEeCCC------cceeEEEEEEEcC----CCccccccCCCCCCCC-CcEEEEEEeecCCCCC-EEEEEe-C
Q psy11132 77 RHSGNYSCTVRNMVA------EDTQVQRLIVNVP----PKIESFAFPFDGLPEG-ARTRVICGVTHGDPPL-TIRWLK-D 143 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~----p~~~~~~~~~~~~~~g-~~~~l~C~~~~~~p~~-~~~W~~-~ 143 (243)
+|+|.|.|.+.+..+ .......|.|... |.+...... ..+..| +.+.|.|.+.+..|.+ .+.|++ +
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSC-ENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC-------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccc-cccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 999999999983211 1123457777652 222221111 234578 9999999996555765 999999 8
Q ss_pred CEecCCCCCe-eEEeecc--ceeEEEEeecCC--CCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 144 GKPLSPRFPV-NVSDLDS--FSSLLSINSVSA--AHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 144 ~~~~~~~~~~-~~~~~~~--~~~~l~i~~~~~--~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
|..+...... ....... ..+.|.|..... +|.|.|+|.|.|..+.......+.+.
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp SCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred CCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 8877541000 0001111 135688887776 78999999999999877666655544
No 209
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.85 E-value=1e-19 Score=145.15 Aligned_cols=214 Identities=15% Similarity=0.156 Sum_probs=130.1
Q ss_pred cCCeEEEEEEeeCCCCCc-eeEEEECCeeecCCCceEEEE-ee--eeceEEEEeecCCCCCeeEEEEEEeCCCcceeEE-
Q psy11132 23 VGERASLICSITKGDIPL-TIKWLKDGRYLDNSAALSITH-VD--QYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQ- 97 (243)
Q Consensus 23 ~g~~~~l~C~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~-~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~- 97 (243)
.|+.++|.|.+.+..|.+ .+.|++++............. .+ ...+.|.|.....+ .|.|+|.+.|..+......
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~ 227 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIF 227 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEe
Confidence 468999999997555654 899999754321000000000 00 11356888887777 8999999999887644332
Q ss_pred ----------EEEEEcCCC----------------------------------------------------ccccccCCC
Q psy11132 98 ----------RLIVNVPPK----------------------------------------------------IESFAFPFD 115 (243)
Q Consensus 98 ----------~l~v~~~p~----------------------------------------------------~~~~~~~~~ 115 (243)
.+.+..+|. +...++...
T Consensus 228 ~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~ 307 (512)
T 1zvo_C 228 RWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQ 307 (512)
T ss_pred cCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChH
Confidence 234433332 111111212
Q ss_pred CCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCCCCe--eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 116 GLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPV--NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
.+..|+.+.|.|.+.+.+| ...++|+++|..+...... .....++ ..+.|.|.....+|.|.|+|.|.|..+..
T Consensus 308 ~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 308 DLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred HhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 3557999999999953344 3599999999886522110 1111111 13568898888999999999999988754
Q ss_pred eeeEEEEEE-eecCCCCCeeeee----ccceee-eccCcccc-c---ccceEEeCCeeE
Q psy11132 190 RYSSKLQVK-GNLNRLPPSYTLV----FSQASY-MSTSYYSF-E---QDSWMIDNENYV 238 (243)
Q Consensus 190 ~~~~~l~v~-~~~~~~~p~~~~~----~~~~~~-~~~~~~~~-~---~~~W~~~~~~~~ 238 (243)
. ...+... +.....+|.+.+. .++.+. +.|....+ | .+.|++||+.+.
T Consensus 388 ~-~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~ 445 (512)
T 1zvo_C 388 Q-RLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVN 445 (512)
T ss_pred C-ceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCeECc
Confidence 3 2223221 1100245665544 245667 89988875 3 589999997653
No 210
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.85 E-value=2.9e-21 Score=145.48 Aligned_cols=172 Identities=15% Similarity=0.246 Sum_probs=111.8
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCc---eeEEEECC-eeecCCCceEEEEee---eeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 16 NPERTLNVGERASLICSITKGDIPL---TIKWLKDG-RYLDNSAALSITHVD---QYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~---~v~W~~~~-~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
+....+.+|+.+.|.|.+.+..|.+ .+.|++++ ..+...........+ ...+.|.|.+++.+|+|.|+|.+.|
T Consensus 120 p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n 199 (323)
T 2wqr_A 120 PSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTH 199 (323)
T ss_dssp CCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred CCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEEC
Confidence 4445688999999999986545544 89999975 433322111110000 1245799999999999999999998
Q ss_pred CCCcceeEEEEEE----EcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCee---EEeec-
Q psy11132 89 MVAEDTQVQRLIV----NVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN---VSDLD- 159 (243)
Q Consensus 89 ~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~~---~~~~~- 159 (243)
..........+.+ ..+|.+...... .....|+.+.|.|.+.+..|+ +.+.|+++|..+....... ....+
T Consensus 200 ~~~~~~~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 278 (323)
T 2wqr_A 200 PHLPRALMRSTTKTSGPRAAPEVYAFATP-EWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGS 278 (323)
T ss_dssp TTSSSCEEEEECCCCSCCBCCEEEEEECC-CCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSS
T ss_pred CCCCCCeeeEEEccCCCCCCCEEEEeCCC-hHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCC
Confidence 7644332333321 134444433332 222349999999999533554 4899999999886532110 01111
Q ss_pred --cceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 160 --SFSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 160 --~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
...+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 279 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 279 GFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 12357899999999999999999998876
No 211
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.85 E-value=3.2e-21 Score=141.67 Aligned_cols=179 Identities=18% Similarity=0.211 Sum_probs=114.3
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceee------------cCC---C-ceEEEEeeeeceEEEE
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYL------------DNS---A-ALSITHVDQYNSMLVI 71 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~------------~~~---~-~~~~~~~~~~~~~l~i 71 (243)
..+...+..+.+.+|++++|.|.+. + +.+.+.|+|. +... ... . ++..........+|.|
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~-~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 105 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPE-K-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEI 105 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECC-T-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEE
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEec-C-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEE
Confidence 3444456667899999999999984 3 5679999982 2111 000 0 3333222233578999
Q ss_pred eecCCCCCeeEEEEEEeCCC----cceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEE
Q psy11132 72 DSVSARHSGNYSCTVRNMVA----EDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRW 140 (243)
Q Consensus 72 ~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W 140 (243)
.+++.+|+|.|.|.+.+... .......|.|.. +|.+.........+..|+.+.|.|.+.+..|.+ .+.|
T Consensus 106 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 185 (270)
T 3qib_D 106 QSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 185 (270)
T ss_dssp SSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEE
Confidence 99999999999999986432 222345677765 333322222212234599999999996446755 8999
Q ss_pred EeCCEecCCCCCeeE-------Eeecc---ceeEEEEeecCCCC-CeeEEEEEEccCccee
Q psy11132 141 LKDGKPLSPRFPVNV-------SDLDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQAR 190 (243)
Q Consensus 141 ~~~~~~~~~~~~~~~-------~~~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~ 190 (243)
+++|..+........ ...++ ..+.|.|.....+| +|.|+|.|.|......
T Consensus 186 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~~ 246 (270)
T 3qib_D 186 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 246 (270)
T ss_dssp EETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCCc
Confidence 999998865322110 00011 12557787777777 9999999999876544
No 212
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.85 E-value=9.2e-20 Score=144.24 Aligned_cols=213 Identities=13% Similarity=0.227 Sum_probs=129.1
Q ss_pred CCCCcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEe
Q psy11132 15 TNPERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVID 72 (243)
Q Consensus 15 ~~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~ 72 (243)
.+....+.+|++++|.|.+. +.+ ...+.|+|+. ..+. ...++.+... .....+|.|.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 7 QSGAEVKKPGASVKVSCKAS-GYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred cCCcEEEeCCCCEEEEEEec-CCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 35567789999999999985 432 5689999853 2110 0123333221 1234689999
Q ss_pred ecCCCCCeeEEEEEEeCCCc------ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCC-C-EEEE
Q psy11132 73 SVSARHSGNYSCTVRNMVAE------DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-L-TIRW 140 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~~~------~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~-~~~W 140 (243)
+++.+|+|.|.|.+.+..+. ......|.|.. +|.+.... ...+..|+.+.|.|.+.+..|. + .+.|
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~g~~v~L~C~~~g~~P~~p~~v~W 163 (475)
T 1iga_A 86 SLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS--LCSTQPDGNVVIACLVQGFFPQEPLSVTW 163 (475)
T ss_pred CCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC--ccccCCCCeEEEEEEEeeecCCCceEEEE
Confidence 99999999999999987641 22345677763 22222211 1233689999999999533465 4 9999
Q ss_pred EeCCEecCCCCCeeEE-eec---cceeEEEEeecCCCCCeeEEEEEEccCcce-eeeEEEEEEe-------------ecC
Q psy11132 141 LKDGKPLSPRFPVNVS-DLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQA-RYSSKLQVKG-------------NLN 202 (243)
Q Consensus 141 ~~~~~~~~~~~~~~~~-~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~~~l~v~~-------------~~~ 202 (243)
++++............ ..+ ...+.|.|..+..+|+|.|+|.|.|..+.. ...+.+.|.- ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~ 243 (475)
T 1iga_A 164 SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPS 243 (475)
T ss_pred cCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCC
Confidence 9987532211000000 011 113468888888899999999999988742 2223322210 000
Q ss_pred CCCCee-------e-eeccceeeeccCcccc-----cccce
Q psy11132 203 RLPPSY-------T-LVFSQASYMSTSYYSF-----EQDSW 230 (243)
Q Consensus 203 ~~~p~~-------~-~~~~~~~~~~~~~~~~-----~~~~W 230 (243)
..+|.+ . +..++.+.+.|..... ..+.|
T Consensus 244 ~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 244 CCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred CCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE
Confidence 013332 1 2457788899987654 37899
No 213
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.85 E-value=1.2e-20 Score=152.78 Aligned_cols=168 Identities=19% Similarity=0.284 Sum_probs=118.9
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC------------CCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN------------SAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
....+.+|++++|.|.+..+.|.+.+.|++++..+.. ..+..+. .+.+|.|.+++.+|+|.|+|
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~~L~i~~v~~~D~G~Y~C 449 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVL----PNGSLFLPAVGIQDEGIFRC 449 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEEC----TTSCEEESSCCGGGCEEEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEc----CCceEEEeccccccCeEEEE
Confidence 3466889999999999844778889999998753211 1121111 24579999999999999999
Q ss_pred EEEeCCCcc-eeEEEEEEEcCCCccccccCCCCCCCCCcE-EEEEEeecCCCCCEEEEEeCCEecCCCCCeeEE-e---e
Q psy11132 85 TVRNMVAED-TQVQRLIVNVPPKIESFAFPFDGLPEGART-RVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS-D---L 158 (243)
Q Consensus 85 ~~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~-~---~ 158 (243)
.+.+..+.. ...+.|.|..+|..+........+..|... .|.|.+..+.|.+.++|++++..+......... . .
T Consensus 450 ~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~ 529 (581)
T 3o3u_N 450 QAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRR 529 (581)
T ss_dssp EEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEE
T ss_pred EEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEE
Confidence 999988876 778889998866554433332334455554 569999644799999999999998754332111 1 1
Q ss_pred --c----cceeEEEEeecCC-CCCeeEEEEEEccCcc
Q psy11132 159 --D----SFSSLLSINSVSA-AHSGEYTCVASNTAAQ 188 (243)
Q Consensus 159 --~----~~~~~l~i~~~~~-~d~g~y~C~~~n~~g~ 188 (243)
+ ...+.|.|..+.. ++.|.|+|.|.|..+.
T Consensus 530 ~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 530 HPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp CTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred cCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 1 1136799998884 4478999999998653
No 214
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.85 E-value=4.4e-21 Score=140.08 Aligned_cols=175 Identities=15% Similarity=0.180 Sum_probs=103.4
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceeec---C-C--------------CceEEEEeeeeceE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLD---N-S--------------AALSITHVDQYNSM 68 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~---~-~--------------~~~~~~~~~~~~~~ 68 (243)
+|.+...+..+.+.+|++++|.|.+. +.+.+.+.|+|. +.... . . .+...........+
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 80 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLA-EGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLR 80 (259)
T ss_dssp ---------CEEEETTCCEEEECCC------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCE
T ss_pred ccccccCCceeEecCCCcEEEEEEEc-cCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEE
Confidence 46666667788899999999999985 666779999983 11110 0 0 11111112223568
Q ss_pred EEEeecCCCCCeeEEEEEEeCCC---cceeEEEEEEEcCC-----------------CccccccCCCCCCCCCcEEEEEE
Q psy11132 69 LVIDSVSARHSGNYSCTVRNMVA---EDTQVQRLIVNVPP-----------------KIESFAFPFDGLPEGARTRVICG 128 (243)
Q Consensus 69 l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~p-----------------~~~~~~~~~~~~~~g~~~~l~C~ 128 (243)
|.|.+++.+|+|.|.|.+.+..+ .......|.|..++ .+... .....+.+|+++.|.|.
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~ 159 (259)
T 3omz_A 81 MILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQA-QSSVSMPVRKAVTLNCL 159 (259)
T ss_dssp EEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECC-CCCEEEETTCCEEECCE
T ss_pred EEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEe-CCEEEEcCCCCEEEEEE
Confidence 99999999999999999998755 23344567776532 11111 12245678999999998
Q ss_pred eecCCCCCEEEEEeCCE--ecC------------CCCCeeEEe-eccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 129 VTHGDPPLTIRWLKDGK--PLS------------PRFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 129 ~~~~~p~~~~~W~~~~~--~~~------------~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
+....+.+.+.|++.+. .+. ...+..... .......|.|.+++.+|+|.|.|.+.+.
T Consensus 160 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 160 YETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 85334788999998432 100 001111110 1122456999999999999999999854
No 215
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.84 E-value=7.7e-21 Score=140.24 Aligned_cols=180 Identities=18% Similarity=0.269 Sum_probs=115.4
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eee-------------c----CCCceEEEEeeeeceEEE
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYL-------------D----NSAALSITHVDQYNSMLV 70 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~-------------~----~~~~~~~~~~~~~~~~l~ 70 (243)
+.+...+..+.+.+|++++|.|.+. +.+.+.+.|+|++ ... . ...++.+........+|.
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSL-DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEES-SSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeC-CCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 4445556678899999999999994 6677899999864 111 0 123444433223356899
Q ss_pred EeecCCCCCeeEEEEEEeCCC------cceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CE
Q psy11132 71 IDSVSARHSGNYSCTVRNMVA------EDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LT 137 (243)
Q Consensus 71 i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~ 137 (243)
|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+.........+..|+.+.|.|.+.+..|+ +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998421 112335677764 23332221111123468999999999644454 79
Q ss_pred EEEEeCCEecCCCCCee---EE----eecc---ceeEEEEeecCCCC-CeeEEEEEEccCccee
Q psy11132 138 IRWLKDGKPLSPRFPVN---VS----DLDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQAR 190 (243)
Q Consensus 138 ~~W~~~~~~~~~~~~~~---~~----~~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~~ 190 (243)
+.|++++..+....... .. ..++ ..+.|.|......| .|.|+|.|.|......
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 99999999886542111 00 0111 12457777666654 6789999999876554
No 216
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.84 E-value=7e-20 Score=134.36 Aligned_cols=175 Identities=18% Similarity=0.253 Sum_probs=111.5
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCC-----CceeEEEECC--ee---ec---------CCCceEEEEeeeeceE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDI-----PLTIKWLKDG--RY---LD---------NSAALSITHVDQYNSM 68 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-----~~~v~W~~~~--~~---~~---------~~~~~~~~~~~~~~~~ 68 (243)
..+.+...+..+.+.+|++++|.|.+. +.+ .+.+.|+++. .. +. ...++.... .....+
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~ 91 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSS-QSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG-SGTDFT 91 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEES-SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEec-CCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc-CCCEEE
Confidence 345555556777899999999999985 444 4799999853 21 11 123444432 223568
Q ss_pred EEEeecCCCCCeeEEEEEEeCCCc-ceeEEEEEEEcCCC----------------------ccccccCCCCCCCCCcEEE
Q psy11132 69 LVIDSVSARHSGNYSCTVRNMVAE-DTQVQRLIVNVPPK----------------------IESFAFPFDGLPEGARTRV 125 (243)
Q Consensus 69 l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~p~----------------------~~~~~~~~~~~~~g~~~~l 125 (243)
|+|.+++.+|+|.|.|.+.+..+. ......|.|...+. +.........+.+|++++|
T Consensus 92 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L 171 (268)
T 1x9q_A 92 LKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKL 171 (268)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEE
T ss_pred EEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEE
Confidence 999999999999999999876442 22334566654321 0111112245788999999
Q ss_pred EEEeecCCC--CCEEEEEeCC--Eec-------------------CCCCCeeEEee-ccceeEEEEeecCCCCCeeEEEE
Q psy11132 126 ICGVTHGDP--PLTIRWLKDG--KPL-------------------SPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCV 181 (243)
Q Consensus 126 ~C~~~~~~p--~~~~~W~~~~--~~~-------------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~ 181 (243)
.|.+. +.+ .+.+.|++++ ..+ ....+...... ......|.|.+++.+|+|.|.|.
T Consensus 172 ~C~~~-~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 250 (268)
T 1x9q_A 172 SCVTS-GFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCT 250 (268)
T ss_dssp EEEEE-SSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEec-CccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEE
Confidence 99995 655 3799999842 211 01112222211 12346799999999999999999
Q ss_pred EEcc
Q psy11132 182 ASNT 185 (243)
Q Consensus 182 ~~n~ 185 (243)
|.+.
T Consensus 251 a~~~ 254 (268)
T 1x9q_A 251 GASY 254 (268)
T ss_dssp EEET
T ss_pred EccC
Confidence 9874
No 217
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.84 E-value=5.8e-21 Score=136.99 Aligned_cols=179 Identities=20% Similarity=0.294 Sum_probs=113.9
Q ss_pred CCCcc-CCCCCcccccCCeEEEEEEeeCCCCC--ceeEEEECCeee-cCCCceEEEEee---eeceEEEEeecCCCCCee
Q psy11132 9 PPKLS-PTNPERTLNVGERASLICSITKGDIP--LTIKWLKDGRYL-DNSAALSITHVD---QYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 9 ~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~--~~v~W~~~~~~~-~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~ 81 (243)
+|.+. ..+....+.+|+.++|.|.+.+..|. ..+.|+++|..+ ...........+ .....|.|.+++.+|.|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 45544 33555667899999999999744563 499999998876 322211111000 123579999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCCCCee--
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVN-- 154 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~~~~~-- 154 (243)
|+|.+.+..+.......+.+. .+|.+.........+ .|..+.|.|.+.+.+| .+.+.|+++|..+.......
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 170 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTA 170 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECC
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCc
Confidence 999999876543333333221 234433322221122 3567999999964455 47999999999886543111
Q ss_pred -EEe--------ec-c---ceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 155 -VSD--------LD-S---FSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 155 -~~~--------~~-~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
... .+ + ..+.|.|.....+|.|.|+|.|.|....
T Consensus 171 ~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 171 VLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 111 11 1 1356888887788899999999998654
No 218
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.84 E-value=1.6e-19 Score=128.15 Aligned_cols=172 Identities=17% Similarity=0.200 Sum_probs=106.0
Q ss_pred CCcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec----------------CCCceEEEEee-eeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD----------------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~----------------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+. +.+ .+.+.|+|+. ..+. ...++.+.... ....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVS-GFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp CCCEECTTCCEEEEEEEC-SSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCeeecCCCcEEEEEEEC-CCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 345688999999999985 433 4689999853 2110 12334333221 124689999999
Q ss_pred CCCCeeEEEEEEeCCCc---ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEec
Q psy11132 76 ARHSGNYSCTVRNMVAE---DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPL 147 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~ 147 (243)
.+|+|.|.|.+.+..+. ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .+.|++++..+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG-CGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC-SSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC-hhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 99999999999876421 22345677763 2333322222 3457899999999996444766 99999988654
Q ss_pred CCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceee
Q psy11132 148 SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY 191 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 191 (243)
...................+.....++ |.|+|.|.|..+....
T Consensus 166 ~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 166 DVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp SCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred ceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 321111111111111111233444456 9999999998886543
No 219
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.84 E-value=2.8e-19 Score=127.41 Aligned_cols=170 Identities=18% Similarity=0.279 Sum_probs=109.2
Q ss_pred CcccccCCeEEEEEEeeCC-CCCceeEEEECC--eee------c-------------CCCceEEEEee-eeceEEEEeec
Q psy11132 18 ERTLNVGERASLICSITKG-DIPLTIKWLKDG--RYL------D-------------NSAALSITHVD-QYNSMLVIDSV 74 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~~------~-------------~~~~~~~~~~~-~~~~~l~i~~~ 74 (243)
...+.+|++++|.|.+.+. .+.+.+.|+|.. ... . ...++.+.... ....+|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 4568899999999999632 224689999742 111 0 12344443221 23468999999
Q ss_pred CCCCCeeEEEEEEeCC--CcceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCC--CEEEEEeCCEe
Q psy11132 75 SARHSGNYSCTVRNMV--AEDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKP 146 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~--~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~~~~ 146 (243)
+.+|+|.|.|.+.+.. ........|.|.. +|.+...... .. ..|+.+.|.|.+..+.|. +.+.|++++..
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~ 166 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLC-ST-QPDGNVVIACLVQGFFPQEPLSVTWSESGQG 166 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECC-SC-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTT
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCc-cc-ccCCCEEEEEEEEeeECCCCEEEEEEECCEE
Confidence 9999999999998764 2233345666652 2222211122 22 689999999999644675 59999999876
Q ss_pred cCCCCCeeEE-eecc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 147 LSPRFPVNVS-DLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 147 ~~~~~~~~~~-~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
+......... ..++ ..+.|.|.....+|+|.|+|.|.|..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 167 VTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 6311100000 0111 13568899999999999999999987543
No 220
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.84 E-value=3.7e-20 Score=136.65 Aligned_cols=190 Identities=15% Similarity=0.238 Sum_probs=113.5
Q ss_pred CCCcccccCCeEEEEEEeeCCC-CCceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEeec
Q psy11132 16 NPERTLNVGERASLICSITKGD-IPLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVIDSV 74 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~-~~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~~ 74 (243)
+....+.+|++++|.|.+.... +.+.+.|++.. .... ...++.+... .....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 5567789999999999985322 45689999742 1110 0123333321 222368999999
Q ss_pred CCCCCeeEEEEEEeCC---------CcceeEEEEEEEc---------------CCCccccccCCCCCCCCCcEEEEEEee
Q psy11132 75 SARHSGNYSCTVRNMV---------AEDTQVQRLIVNV---------------PPKIESFAFPFDGLPEGARTRVICGVT 130 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~---------~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~~g~~~~l~C~~~ 130 (243)
+.+|+|.|.|.+.+.. ........|.|.. ++.+.. .+...+.+|++++|.|.+.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~--~p~~~v~~G~~v~L~C~~~ 164 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQ--PPSVSKGLRQTATLTCTGN 164 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBC--CSEEEECTTCCEEEEEECC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEe--CCcEEEecCCCEEEEEEec
Confidence 9999999999998761 1122344566654 222222 1225578999999999995
Q ss_pred cCCC-CCEEEEEeCC--EecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc---eeee
Q psy11132 131 HGDP-PLTIRWLKDG--KPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ---ARYS 192 (243)
Q Consensus 131 ~~~p-~~~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~---~~~~ 192 (243)
...+ .+.+.|++.. ..+. ...+.... .......|.|.+++.+|+|.|.|.+.|..+. ....
T Consensus 165 ~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~ 243 (280)
T 3fku_X 165 SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSAS-RSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGG 243 (280)
T ss_dssp CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEE-EETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCC
T ss_pred CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEE-ccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCC
Confidence 3244 4799999732 2111 01112222 2234567999999999999999999997622 2234
Q ss_pred EEEEEEeecCCCCCeee
Q psy11132 193 SKLQVKGNLNRLPPSYT 209 (243)
Q Consensus 193 ~~l~v~~~~~~~~p~~~ 209 (243)
..|.|.+.+. .+|.+.
T Consensus 244 t~l~V~~~~~-~~P~v~ 259 (280)
T 3fku_X 244 TKLTVLGQPK-AAPSAA 259 (280)
T ss_dssp CEEEEC-----------
T ss_pred EEEEECCCCC-CCCcEE
Confidence 5666654332 344443
No 221
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.84 E-value=1.1e-20 Score=136.07 Aligned_cols=179 Identities=16% Similarity=0.210 Sum_probs=109.7
Q ss_pred CCCccCCCCCcc--cccCCeEEEEEEeeCCC--CCc-eeEEEECCeeecCCCce-EEEE---eeeeceEEEEeecCCCCC
Q psy11132 9 PPKLSPTNPERT--LNVGERASLICSITKGD--IPL-TIKWLKDGRYLDNSAAL-SITH---VDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 9 ~p~~~~~~~~~~--~~~g~~~~l~C~~~~~~--~~~-~v~W~~~~~~~~~~~~~-~~~~---~~~~~~~l~i~~~~~~d~ 79 (243)
+|.+...+.... +.+|++++|.|.+.+.. |.+ .+.|++++..+...... .... .-.....|.|.+++.+|.
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 344443344444 78999999999997432 654 89999998765432100 0000 001246799999999999
Q ss_pred eeEEEEEEeCCCcceeEEEE----EEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCee
Q psy11132 80 GNYSCTVRNMVAEDTQVQRL----IVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN 154 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~~ 154 (243)
|.|+|.+.+..+.......+ .+..+|.+...... .....|+.+.|.|.+.+.+|+ +.+.|+++|..+.......
T Consensus 95 g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 173 (239)
T 1i1c_A 95 KTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPP-KEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTP 173 (239)
T ss_dssp CCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCC-GGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECC
T ss_pred CeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCC-hHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecC
Confidence 99999999887754222222 23344554433322 122347899999999644665 5899999999875422111
Q ss_pred E-Eeeccc---eeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 155 V-SDLDSF---SSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 155 ~-~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
. ...++. .+.|.+.....+|.|.|+|.|.|....
T Consensus 174 ~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 174 PTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 1 111111 233555544445789999999998654
No 222
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.83 E-value=8.7e-21 Score=133.89 Aligned_cols=166 Identities=15% Similarity=0.247 Sum_probs=98.0
Q ss_pred ccCCeEEEEEEeeCCCC---CceeEEEECCeeecCCCceEEEEeeee----ceEEEEeecCCCCCeeEEEEEEeCCCcce
Q psy11132 22 NVGERASLICSITKGDI---PLTIKWLKDGRYLDNSAALSITHVDQY----NSMLVIDSVSARHSGNYSCTVRNMVAEDT 94 (243)
Q Consensus 22 ~~g~~~~l~C~~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 94 (243)
.+|+++.|.|.+.+..| .+.+.|+|++..+.............+ ...|.|......|+|.|+|.+.+..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 78999999999974333 359999999987754311000000000 12233333444459999999999876542
Q ss_pred eEEEE----EEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCeeEE-eecc---ceeEE
Q psy11132 95 QVQRL----IVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVS-DLDS---FSSLL 165 (243)
Q Consensus 95 ~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~~~~-~~~~---~~~~l 165 (243)
....+ .+..+|.+......... ..|..+.|.|.+.+.+|+ +.+.|+++|..+......... ..++ ..+.|
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 174 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL 174 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHH-hcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEE
Confidence 22233 22344554433322122 246679999999643564 599999999887632111111 1111 12345
Q ss_pred EEeecCCCCCeeEEEEEEccCcc
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
.+.....+|.|.|+|.|.|....
T Consensus 175 ~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 175 TVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEHHHHHTTCCEEEEEECTTSG
T ss_pred EECHHHcCCCCEEEEEEEcCCcC
Confidence 56555556799999999997654
No 223
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.83 E-value=1.6e-19 Score=131.67 Aligned_cols=171 Identities=19% Similarity=0.243 Sum_probs=109.7
Q ss_pred CCCcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~ 73 (243)
+....+.+|++++|.|.+. +.+ .+.+.|+|+. ..+. ...++.+... .....+|.|.+
T Consensus 13 p~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKAS-GYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CSEEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCEEEcCCCCEEEEEEeC-CcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 4456789999999999996 444 5689999863 2110 0234443322 12356899999
Q ss_pred cCCCCCeeEEEEEEeCCCc---ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCE
Q psy11132 74 VSARHSGNYSCTVRNMVAE---DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGK 145 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~ 145 (243)
++.+|+|.|.|.+.+..+. ......|.|.. +|.+...... ..+..|+.+.|.|.+....|.+ .+.|++++.
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~ 170 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 170 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-CC--CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCC-ccccCCCcEEEEEEEEeEeCCCCEEEEecCCC
Confidence 9999999999999985421 12335677764 2333222222 3456799999999996445765 999999987
Q ss_pred ecCCCCCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 146 PLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 146 ~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
.+............ ...+.|.|.....+| |.|+|.|.|.....
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 171 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred cCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 65311000011111 123678998888877 99999999976553
No 224
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.83 E-value=9.8e-20 Score=132.44 Aligned_cols=180 Identities=17% Similarity=0.209 Sum_probs=112.5
Q ss_pred CCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e--------------cCCCceEEEEee-eeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L--------------DNSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~--------------~~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+.+. .+...+.|+|.. .. + ....++.+.... ....+|+|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 34568899999999998631 234689999842 11 1 012344443322 235679999999
Q ss_pred CCCCeeEEEEEEeCC----CcceeEEEEEEE----cCCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEe
Q psy11132 76 ARHSGNYSCTVRNMV----AEDTQVQRLIVN----VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKP 146 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~----~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~ 146 (243)
.+|+|.|.|.+.+.. ........|.|. .+|.+...... ..+..|+.+.|.|.+.++.|.+ .+.|++++..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 88 SEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp GGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC-------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred hhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCC-cccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 999999999998752 222334567775 22333222222 3456799999999996447755 9999998874
Q ss_pred cCCCCCeeEEeec--cceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 147 LSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 147 ~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+............ ...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 167 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 167 SGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 3211000011111 113678999988889 99999999998877666665544
No 225
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.83 E-value=1.5e-19 Score=134.04 Aligned_cols=182 Identities=15% Similarity=0.180 Sum_probs=114.9
Q ss_pred CCCcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEe-eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHV-DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~ 73 (243)
+....+.+|++++|.|.+. +.+ .+.+.|+++. ..+. ...++.+... .....+|+|.+
T Consensus 29 p~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKAS-GYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp CCCEEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred CCcEEecCCCCEEEEEecc-CCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 4567899999999999986 444 4689999853 1110 1133333322 12246899999
Q ss_pred cCCCCCeeEEEEEEeCC-Cc----ceeEEEEEEEcC-----------C---Cccccc-cCCCCCCCCCcEEEEEEeecCC
Q psy11132 74 VSARHSGNYSCTVRNMV-AE----DTQVQRLIVNVP-----------P---KIESFA-FPFDGLPEGARTRVICGVTHGD 133 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~-~~----~~~~~~l~v~~~-----------p---~~~~~~-~~~~~~~~g~~~~l~C~~~~~~ 133 (243)
++.+|+|.|.|.+.+.. +. ......|.|..+ + ...... .....+.+|++++|.|.+ .+.
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~ 186 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKS-SQS 186 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEE-SSC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEc-CCc
Confidence 99999999999999864 11 112346666651 1 111111 112346789999999999 576
Q ss_pred CCC------EEEEEeCC--EecC----C--------CCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-ee
Q psy11132 134 PPL------TIRWLKDG--KPLS----P--------RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YS 192 (243)
Q Consensus 134 p~~------~~~W~~~~--~~~~----~--------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~ 192 (243)
+.+ .+.|+++. ..+. . ..+.... .......|.|.+++.+|+|.|.|.|.|.....- .-
T Consensus 187 ~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~g 265 (291)
T 2gki_A 187 LFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGS-GSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSG 265 (291)
T ss_dssp CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred cccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEE-ecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCC
Confidence 654 89999863 2110 0 1122221 123356899999999999999999999654332 23
Q ss_pred EEEEEEee
Q psy11132 193 SKLQVKGN 200 (243)
Q Consensus 193 ~~l~v~~~ 200 (243)
..|.|.+.
T Consensus 266 t~l~v~~~ 273 (291)
T 2gki_A 266 TKLEIKHH 273 (291)
T ss_dssp EEEEEECC
T ss_pred EEEEEEee
Confidence 45666643
No 226
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.82 E-value=2.3e-19 Score=129.31 Aligned_cols=172 Identities=16% Similarity=0.262 Sum_probs=108.0
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eeec---------------CCCceEEEEeeeeceEEEEeecCCCC
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYLD---------------NSAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~~---------------~~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
+..+.+.+|++++|.|.+. .+.+.+.|+|++ ..+. ...++.+........+|.|.+++.+|
T Consensus 6 p~~v~v~~G~~v~L~C~~~--~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 83 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQT--NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQ 83 (238)
T ss_dssp CSEEEEETTCCEEEEEEES--SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGG
T ss_pred CCeeEEeCCCcEEEEEEeC--CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCccc
Confidence 4566789999999999983 346799999863 1110 12333332212235689999999999
Q ss_pred CeeEEEEEEeCCC---c--ceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEe
Q psy11132 79 SGNYSCTVRNMVA---E--DTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKP 146 (243)
Q Consensus 79 ~G~Y~C~~~~~~~---~--~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~ 146 (243)
+|.|.|.+.+..+ . ......|.|.. +|.+.........+..|+.+.|.|.+.+..|. +.+.|+++|..
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~ 163 (238)
T 1bec_A 84 TSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKE 163 (238)
T ss_dssp CEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEE
T ss_pred CEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEE
Confidence 9999999998632 1 12334577765 33333322222345679999999999644464 49999999998
Q ss_pred cCCCCCee---EEeeccc---eeEEEEeecCCCC-CeeEEEEEEccCcce
Q psy11132 147 LSPRFPVN---VSDLDSF---SSLLSINSVSAAH-SGEYTCVASNTAAQA 189 (243)
Q Consensus 147 ~~~~~~~~---~~~~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g~~ 189 (243)
+....... ....++. .+.|.|......| .|.|+|.|.|.....
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 213 (238)
T 1bec_A 164 VHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 213 (238)
T ss_dssp ECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCCT
T ss_pred CCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCCC
Confidence 86543211 1111111 1334444433334 678999999975433
No 227
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.82 E-value=1.5e-18 Score=138.37 Aligned_cols=177 Identities=21% Similarity=0.274 Sum_probs=106.5
Q ss_pred CCCcccccCCeEEEEEEeeCCCC-C--ceeEEEEC--Ceee---c-------------CCCceEEEEe-eeeceEEEEee
Q psy11132 16 NPERTLNVGERASLICSITKGDI-P--LTIKWLKD--GRYL---D-------------NSAALSITHV-DQYNSMLVIDS 73 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~-~--~~v~W~~~--~~~~---~-------------~~~~~~~~~~-~~~~~~l~i~~ 73 (243)
+..+.+.+|+.++|.|.+..... . ..+.|||. +..+ . ...++.+... .....+|.|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 86 (512)
T 1zvo_C 7 SGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRS 86 (512)
T ss_pred CCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECc
Confidence 34567889999999999853221 2 68999985 2211 0 0133333321 12247899999
Q ss_pred cCCCCCeeEEEEEEeCCC-----------c--ceeEEEEEEEcC----CCccccccCCCCCCCCCcEEEEEEeecCCCCC
Q psy11132 74 VSARHSGNYSCTVRNMVA-----------E--DTQVQRLIVNVP----PKIESFAFPFDGLPEGARTRVICGVTHGDPPL 136 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~-----------~--~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 136 (243)
++.+|+|.|.|.+.+..+ . ......|.|... |.+............|+.+.|.|.+.+..|.+
T Consensus 87 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p 166 (512)
T 1zvo_C 87 MSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTS 166 (512)
T ss_pred CCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCc
Confidence 999999999999987532 1 123456777632 22221111101023468999999996444754
Q ss_pred -EEEEEeCCEecCCCCCeeEEeec---cceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 137 -TIRWLKDGKPLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 137 -~~~W~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
.++|++++..............+ ...+.|.|.....+ .|.|+|.|.|..+.....+
T Consensus 167 ~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 167 VTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred eEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 99999965432100000001111 11356888877777 8999999999988655443
No 228
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.82 E-value=2e-19 Score=132.17 Aligned_cols=208 Identities=16% Similarity=0.140 Sum_probs=109.2
Q ss_pred CCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--CeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCc
Q psy11132 15 TNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAE 92 (243)
Q Consensus 15 ~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 92 (243)
.+++..+.+|+.+.|+|.+. ...+..+.|... ...+... +.....+.+.+++.+ |.|.|.+......
T Consensus 5 ~P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~~--------g~~~~~~~l~~v~~~--~~y~C~~~~~~~~ 73 (291)
T 1mq8_A 5 SPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLLP--------GNNRKVYELSNVQED--SQPMCYSNCPDGQ 73 (291)
T ss_dssp ECSEEEECTTCEEEEEEEEC-CSSCSEEEEECSSCCCCCCCS--------CSSEEEEEEESCCSC--CCCEEEEECSSCE
T ss_pred eCCccEEcCCCeEEEEEeCC-CCCCccceEEecCCCcccccC--------CCceEEEEEEecccC--CeEEEEEEcCCcc
Confidence 35567799999999999984 333335888631 1111011 111234677777743 5799999754444
Q ss_pred ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC--EEEEEeCCEecCCCCCeeEEeeccceeEEEEeec
Q psy11132 93 DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL--TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV 170 (243)
Q Consensus 93 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 170 (243)
....+.|.|..+|...........+.+|+.++|.|.+.++.|.. .++|++++..+..... ........|.+...
T Consensus 74 ~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~----~~~~~~~~l~~~~~ 149 (291)
T 1mq8_A 74 STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA----VGEPAEVTTTVLVR 149 (291)
T ss_dssp EEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC----CBTTEEEEEECCCS
T ss_pred EEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC----CCCCceEEEEeeee
Confidence 56677888888877655544334578899999999997666654 6899999977653221 01122456776666
Q ss_pred CCCCCeeEEEEEEccCcc--------eeeeEEEEEEeecCCCCCee----eeeccceeeeccCcccc-c----ccceEEe
Q psy11132 171 SAAHSGEYTCVASNTAAQ--------ARYSSKLQVKGNLNRLPPSY----TLVFSQASYMSTSYYSF-E----QDSWMID 233 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g~--------~~~~~~l~v~~~~~~~~p~~----~~~~~~~~~~~~~~~~~-~----~~~W~~~ 233 (243)
..++.+.|+|.|.|..+. .+....|.|.-.+. ..+.+ .+..++.+.++|...++ | .+.|+++
T Consensus 150 ~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~-~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~ 228 (291)
T 1mq8_A 150 RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA-TPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALG 228 (291)
T ss_dssp SSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC---------------------------------------------
T ss_pred eccCCceEEEEEEecCCccCCccccccccceEEEEEecCC-CCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEEC
Confidence 666667999999997653 23445566652111 11111 34568899999998865 3 5999999
Q ss_pred CCeeE
Q psy11132 234 NENYV 238 (243)
Q Consensus 234 ~~~~~ 238 (243)
|+.+.
T Consensus 229 g~~l~ 233 (291)
T 1mq8_A 229 DQRLN 233 (291)
T ss_dssp -----
T ss_pred CEecC
Confidence 98764
No 229
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.82 E-value=1.2e-19 Score=131.93 Aligned_cols=170 Identities=17% Similarity=0.267 Sum_probs=95.0
Q ss_pred CcccccCCeEEEEEEeeCCCC--CceeEEEECC--eeec-----------------CCCceEEEEee-eeceEEEEeecC
Q psy11132 18 ERTLNVGERASLICSITKGDI--PLTIKWLKDG--RYLD-----------------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
...+.+|++++|.|.+. +.+ .+.+.|+|.. ..+. ...++.+.... ....+|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAAS-GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CEEECTTCEEEEEEEEE-SSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CEEEcCCCcEEEEEEec-cccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 45688999999999996 443 4689999853 1110 12344333221 235689999999
Q ss_pred CCCCeeEEEEEEeCCCc-------------ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-E
Q psy11132 76 ARHSGNYSCTVRNMVAE-------------DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-T 137 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~~-------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~ 137 (243)
.+|+|.|.|.+.+..+. ......|.|.. +|.+...... ..+..|+.+.|.|.+.+..|.+ .
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~-~~~~~g~~v~L~C~~~g~~P~pi~ 166 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVT 166 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC------------CCCEEEEEBSSCCE
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCc-ccccCCCcEEEEEEEeeEECCCcE
Confidence 99999999999986541 11234677764 2333222211 2356799999999996445766 9
Q ss_pred EEEEeCCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 138 IRWLKDGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 138 ~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
+.|++++..+...........++ ..+.|.|..+..+| |.|+|.|.|......
T Consensus 167 v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 167 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp EEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred EEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 99999987643110000111111 13557787777777 999999999765433
No 230
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.81 E-value=3.2e-20 Score=134.93 Aligned_cols=177 Identities=15% Similarity=0.225 Sum_probs=110.3
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--ee---ec------------CCCceEEEEeeeeceEEEEeec
Q psy11132 12 LSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RY---LD------------NSAALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~---~~------------~~~~~~~~~~~~~~~~l~i~~~ 74 (243)
+...+..+.+.+|++++|.|.+. .+.+.+.|+++. .. +. ...++.+.........|.|.++
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~--~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN--LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC--SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC--CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 44445667899999999999983 346799999853 11 10 1123333221223468999999
Q ss_pred CCCCCeeEEEEEEeCC---CcceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCC
Q psy11132 75 SARHSGNYSCTVRNMV---AEDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDG 144 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~---~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~ 144 (243)
+.+|+|.|.|.+.+.. ........|.|.. +|.+.........+..|+.+.|.|.+.+..|. +.+.|+++|
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 163 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 163 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 9999999999999752 1112234566653 23332221111123368999999999644564 599999999
Q ss_pred EecCCCCCee--EE-----eecc---ceeEEEEeecCCC-CCeeEEEEEEccCccee
Q psy11132 145 KPLSPRFPVN--VS-----DLDS---FSSLLSINSVSAA-HSGEYTCVASNTAAQAR 190 (243)
Q Consensus 145 ~~~~~~~~~~--~~-----~~~~---~~~~l~i~~~~~~-d~g~y~C~~~n~~g~~~ 190 (243)
..+....... .. ..++ ..+.|.|...... +.|.|+|.|.|......
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 164 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp EEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 8876542111 00 0111 1245777766554 57799999999876554
No 231
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.81 E-value=4.3e-18 Score=120.20 Aligned_cols=156 Identities=16% Similarity=0.256 Sum_probs=111.1
Q ss_pred cCCCCCcccccCCeEEEEEEeeCCCC---CceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeC
Q psy11132 13 SPTNPERTLNVGERASLICSITKGDI---PLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNM 89 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 89 (243)
...|....+..|+.++|+|.+.++.| +..++|+|++..+... ...|.+..++..|+|.|+|.+.+.
T Consensus 6 s~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-----------T~tLti~s~t~sdSG~YqCvVTDa 74 (304)
T 3shs_A 6 SIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-----------TATLTVADATSENAGSYKVTVQDT 74 (304)
T ss_dssp EEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-----------SSEEEESSCCGGGCEEEEEEEEET
T ss_pred EeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-----------cceEEeeeccccCCeEEEEEEEEC
Confidence 33455666889999999999977777 6699999999876542 346888899999999999999987
Q ss_pred CCcceeEEEEEEEcCCCcc--ccccCCCCCCCCCcEEEEEEe--ecCCC-----CCEEEEEeCCEecCCCCCeeEEeecc
Q psy11132 90 VAEDTQVQRLIVNVPPKIE--SFAFPFDGLPEGARTRVICGV--THGDP-----PLTIRWLKDGKPLSPRFPVNVSDLDS 160 (243)
Q Consensus 90 ~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~~g~~~~l~C~~--~~~~p-----~~~~~W~~~~~~~~~~~~~~~~~~~~ 160 (243)
.+.......+.|...+.+. ...+....+..|..+.|.+.+ .+|.+ ..+++|++++..+...
T Consensus 75 ~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA---------- 144 (304)
T 3shs_A 75 DTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT---------- 144 (304)
T ss_dssp TTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS----------
T ss_pred CCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc----------
Confidence 7765433333444332221 111111223457888998877 55555 4699999999876533
Q ss_pred ceeEEEEeecCCCCCeeEEEEEEccCcceee
Q psy11132 161 FSSLLSINSVSAAHSGEYTCVASNTAAQARY 191 (243)
Q Consensus 161 ~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 191 (243)
..|.+......++|.|+|.+.|..+....
T Consensus 145 --q~lT~sS~TateaG~YtV~VTn~~~~c~~ 173 (304)
T 3shs_A 145 --QDITIQEFTADKNGVYTVKVWGESEDSAA 173 (304)
T ss_dssp --SEEEECSCCGGGCEEEEEEEESSSGGGCE
T ss_pred --cccceeeEEecCCeEEEEEEEcCCCCccc
Confidence 34666677788999999999999774433
No 232
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.81 E-value=9.8e-20 Score=114.30 Aligned_cols=96 Identities=26% Similarity=0.418 Sum_probs=82.3
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.|...+.+..+.+|+.+.|.|.+. |.|.+.+.|+|++..+....++.+.... ....|.|.+++.+|+|.|+|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~-G~P~p~v~W~k~g~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVL-GEPPPVVVWEKGGQQLAASERLSFPADG-AEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEE-EESCCEEEEEETTEECCCCSSEECCEET-TEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEE-EecCCEEEEEECcccccceeeEEEeecC-ceEEEEEecCChhhCEEEEEEEE
Confidence 578888888889999999999999995 8888899999999999887776654432 35689999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCC
Q psy11132 88 NMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p 105 (243)
|..|.....+.|.|.++|
T Consensus 90 N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 90 NAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp ETTEEEEEEEEEEEEC--
T ss_pred ECCCEEEEEEEEEEEcCC
Confidence 999998888999998765
No 233
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.81 E-value=4.2e-19 Score=127.26 Aligned_cols=176 Identities=16% Similarity=0.186 Sum_probs=108.4
Q ss_pred cCCCCCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---ec-------------CCCceEEEEee-eeceEEEEe
Q psy11132 13 SPTNPERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---LD-------------NSAALSITHVD-QYNSMLVID 72 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~~-------------~~~~~~~~~~~-~~~~~l~i~ 72 (243)
...+..+.+.+|++++|.|.+... .+...+.|+|.. .. +. ...++.+.... ....+|.|.
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIY 84 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEEC
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 334556778999999999998532 145689999843 11 10 12333332211 134689999
Q ss_pred ecCCCCCeeEEEEEEeC--CC--cceeEEEEEEEc---------CCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEE
Q psy11132 73 SVSARHSGNYSCTVRNM--VA--EDTQVQRLIVNV---------PPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTI 138 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~--~~--~~~~~~~l~v~~---------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~ 138 (243)
+++.+|+|.|.|.+.+. .. .......|.|.. +|.+.........+..|+.+.|.|.+.+..|. +.+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v 164 (230)
T 1ypz_F 85 SLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRV 164 (230)
T ss_dssp SCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEE
T ss_pred cCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEE
Confidence 99999999999999874 11 112335677762 23322222111123458899999999655574 699
Q ss_pred EEEe-CCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 139 RWLK-DGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 139 ~W~~-~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
.|++ +|..+...........++ ..+.|.|..... .|.|+|.|.|..+...
T Consensus 165 ~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~--~~~ytC~v~~~~~~~~ 218 (230)
T 1ypz_F 165 YWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM--GKEHRCIVKHENNKGG 218 (230)
T ss_dssp EEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT--TSCEEEEEECSSCTTT
T ss_pred EEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC--CCEEEEEEEECCCCCc
Confidence 9999 777665322111111121 135688877665 4999999999876543
No 234
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.80 E-value=7.3e-18 Score=129.95 Aligned_cols=188 Identities=16% Similarity=0.179 Sum_probs=131.8
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC--ceEEEEeeeeceEEEEeecCCCCC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA--ALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
+.|.|..+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.... ......|.|.+++..|+
T Consensus 93 ~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~i~W~~~g~~l~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~ 170 (389)
T 2jll_A 93 MYLDIEYAPKFISNQTIYYSWEGNPINISCDVK-SNPPASIHWRRDKLVLPAKNTTNLKTYS-TGRKMILEIAPTSDNDF 170 (389)
T ss_dssp EEEEEEEEEEECCSCCEEEECTTCCEEEEECEE-EESCCEEEEEETTEESSCTTCTTEEEEE-CSSCEEEEECCCSTTSS
T ss_pred EEEEEEeCCEEecCcceEEeccCCEEEEEEEEE-ecCCCeEEEEECCccCCcccCceEEEec-cCCEEEEEECCCChhhC
Confidence 467788889887766555788999999999995 77888999999999887644 333322 22357899999999999
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEee---cCCCCC--EEEEEeCCEecCCCCCee
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVT---HGDPPL--TIRWLKDGKPLSPRFPVN 154 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~---~~~p~~--~~~W~~~~~~~~~~~~~~ 154 (243)
|.|+|.+.|..|.....+.+.+...|..+.... .....+..+.|.|... .+.|.. .+.|.+++... ..
T Consensus 171 G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~--~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~-----~~ 243 (389)
T 2jll_A 171 GRYNCTATNHIGTRFQEYILALADVPSSPYGVK--IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI-----WK 243 (389)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECCCCCCCEEEE--EEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSC-----CE
T ss_pred EEEEEEEEcCCCcEEEEEEEEecCCCCCCcceE--EeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcc-----cE
Confidence 999999999999887777787766554331111 1112357788988742 122322 46777765421 11
Q ss_pred EEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 155 VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 155 ~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..........+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 244 ~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~ 287 (389)
T 2jll_A 244 IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQ 287 (389)
T ss_dssp EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred EeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEE
Confidence 11222234678999999999999999999999876554444443
No 235
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.80 E-value=9.6e-20 Score=138.36 Aligned_cols=178 Identities=16% Similarity=0.243 Sum_probs=107.7
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCC-ceeEEEECCeeecCCCceEEEEe-e--eeceEEEEeecCCCCCeeEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIP-LTIKWLKDGRYLDNSAALSITHV-D--QYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~-~--~~~~~l~i~~~~~~d~G~Y~C 84 (243)
+|.+...+....+.+|+.++|.|.+.+..|. +.+.|++++..+........... + ...+.|.|.+++.+| |.|+|
T Consensus 120 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C 198 (344)
T 1za6_B 120 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 198 (344)
T ss_dssp CCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEE
T ss_pred CCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEE
Confidence 4555543334457899999999999754464 69999999875321100000000 0 113479999888888 99999
Q ss_pred EEEeCCCcceeEEEEE------------------------EEcCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEE
Q psy11132 85 TVRNMVAEDTQVQRLI------------------------VNVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIR 139 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~------------------------v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~ 139 (243)
.+.|..+.......+. +..+|.+...... .....|..+.|.|.+.+..| .+.+.
T Consensus 199 ~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~-~~~~~~~~~~L~C~~~g~~P~~~~v~ 277 (344)
T 1za6_B 199 NVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPS-RDELTKNQVSLTCLVKGFYPSDIAVE 277 (344)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEECCC-GGGGGSSSEEEEEEEEEEBSSCCEEE
T ss_pred EEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCC-hHhccCCcEEEEEEEeeEECCCeEEE
Confidence 9999877533222221 1233443333222 11234667999999953345 47999
Q ss_pred EEeCCEecCCCCCeeEE-eeccc---eeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 140 WLKDGKPLSPRFPVNVS-DLDSF---SSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 140 W~~~~~~~~~~~~~~~~-~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
|+++|..+......... ..++. .+.|.|.....+|.|.|+|.|.|....
T Consensus 278 W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 278 WESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 99999887643211111 11111 244666665567799999999997654
No 236
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.79 E-value=4.5e-19 Score=128.95 Aligned_cols=171 Identities=16% Similarity=0.242 Sum_probs=106.5
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceee------cCC---------C-ceEEEEeeeeceEEEEeecCCC
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYL------DNS---------A-ALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~------~~~---------~-~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+..+.+.+|++++|.|.+. +.+.+.+.|+|. +... ... . ++....... .. |.|.+++.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~-~~-L~I~~v~~~ 84 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILK-NSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD-TE-LRLQVANMS 84 (253)
T ss_dssp CSEEEEESSCCEEEEEECS-CTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSS-SC-CEEEEESCS
T ss_pred CCeEEEeCCCcEEEEEEeC-CCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCC-Ce-EEEccCChh
Confidence 4456788999999999984 667779999982 1111 000 0 222221111 12 999999999
Q ss_pred CCeeEEEEEEeCCC------cceeEEEEEEEc------CCCccccccCCCCCCCCCcEEEEEEeecCCCCC-EEEEEeCC
Q psy11132 78 HSGNYSCTVRNMVA------EDTQVQRLIVNV------PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDG 144 (243)
Q Consensus 78 d~G~Y~C~~~~~~~------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~ 144 (243)
|+|.|.|.+.+..+ .......|.|.. +|.+.........+..|+.+.|.|.+.+..|++ .+.|+++|
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g 164 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 164 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECC
Confidence 99999999986543 112234566653 233222211111223468999999996547766 99999999
Q ss_pred EecCCCCCeeEEe-------ecc---ceeEEEEeecCCCC-CeeEEEEEEccCcce
Q psy11132 145 KPLSPRFPVNVSD-------LDS---FSSLLSINSVSAAH-SGEYTCVASNTAAQA 189 (243)
Q Consensus 145 ~~~~~~~~~~~~~-------~~~---~~~~l~i~~~~~~d-~g~y~C~~~n~~g~~ 189 (243)
..+.......... .++ ..+.|.|.....+| .|.|+|.|.|.....
T Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~~ 220 (253)
T 3to4_D 165 KEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (253)
T ss_dssp EEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred EECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCCC
Confidence 9886532211000 111 12567788777777 779999999975443
No 237
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.78 E-value=1.2e-18 Score=126.18 Aligned_cols=180 Identities=16% Similarity=0.227 Sum_probs=108.3
Q ss_pred CCCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e--------------cCCCceEEEEee-eeceEEEEeec
Q psy11132 16 NPERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L--------------DNSAALSITHVD-QYNSMLVIDSV 74 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~--------------~~~~~~~~~~~~-~~~~~l~i~~~ 74 (243)
+....+.+|++++|.|.+... .+...+.|++.. .. + ....++.+.... ....+|+|.++
T Consensus 6 ~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (248)
T 3u2s_H 6 SGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSL 85 (248)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 345678899999999999632 234589999742 11 1 012344443322 33568999999
Q ss_pred CCCCCeeEEEEEEeCC----------------------CcceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEE
Q psy11132 75 SARHSGNYSCTVRNMV----------------------AEDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICG 128 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~----------------------~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~ 128 (243)
+.+|+|.|.|.+.+.. ........|.|.. +|.+...... ..+..|+.+.|.|.
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~ 164 (248)
T 3u2s_H 86 RVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCL 164 (248)
T ss_dssp CGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC-------CEEEEEEE
T ss_pred CHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCC-ccccCCCcEEEEEE
Confidence 9999999999998641 1112234566652 2222222222 33457999999999
Q ss_pred eecCCC-CCEEEEEeCCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 129 VTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 129 ~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
+.+..| ++.+.|++++..+...........++ ..+.|.|.....++ |.|+|.|.|..+.......+.+
T Consensus 165 ~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 165 VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 965566 67899999886432111001111111 13568888877788 9999999998876655544443
No 238
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.78 E-value=1.3e-17 Score=124.48 Aligned_cols=184 Identities=15% Similarity=0.098 Sum_probs=123.0
Q ss_pred eEEEecCCCccCC-----CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEee-cCC
Q psy11132 3 VIFSTVPPKLSPT-----NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDS-VSA 76 (243)
Q Consensus 3 ~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~ 76 (243)
.|.|..+|.+... +....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++...... ....|.|.+ ++.
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~ 170 (305)
T 2nzi_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFS-GKPDPVITWQKGQDLIDNNGHYQVIVTR-SFTSLVFPNGVER 170 (305)
T ss_dssp EEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEE-EESCCEEEEEESSSBCCSSSSCEEEECS-SEEEEEETTCCCS
T ss_pred EEEEecCCccCCCccccccccEEecCCCEEEEEEEEC-CCCCCEEEEEECCEECCCCCcEEEEEcC-CceEEEEecCCcc
Confidence 4556665554332 2456688899999999995 7788899999999988776665544322 257899999 999
Q ss_pred CCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEe-CCEecCCCCCeeE
Q psy11132 77 RHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK-DGKPLSPRFPVNV 155 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~~~~~~~~~~~~~ 155 (243)
.|.|.|+|.+.|..|.....+.|.|...|..+.... .....++.+.|.|..........+.+|. ...... ......
T Consensus 171 ~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~--~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~-~~~w~~ 247 (305)
T 2nzi_A 171 KDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVK--VSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATT-AERWLR 247 (305)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEE--EESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETT-SCCEEE
T ss_pred CccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCce--eeeccCCEEEEEEcCCccCCCCceeEEEEEEecCC-CCccEE
Confidence 999999999999999988889999987765443211 1223567788888652111111122221 111111 111111
Q ss_pred EeeccceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 156 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 156 ~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
.. ......+.|.++...+.|.|+|.|.|..|....+
T Consensus 248 ~~-~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 248 VG-QARETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp EE-EESSSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred Cc-cccCceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 11 1114678999999999999999999999876544
No 239
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.78 E-value=2.2e-18 Score=123.67 Aligned_cols=178 Identities=16% Similarity=0.282 Sum_probs=105.2
Q ss_pred CcccccCCeEEEEEEeeCCC-CCcee--EEEECC--e---ee-----cC-----------CCceEEEEee-eeceEEEEe
Q psy11132 18 ERTLNVGERASLICSITKGD-IPLTI--KWLKDG--R---YL-----DN-----------SAALSITHVD-QYNSMLVID 72 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~-~~~~v--~W~~~~--~---~~-----~~-----------~~~~~~~~~~-~~~~~l~i~ 72 (243)
...+.+|++++|.|.+.... ....+ .|++.. . .+ .. ..++.+.... ....+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 88 (232)
T 3qhz_H 9 PALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMT 88 (232)
T ss_dssp CSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred CEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEEC
Confidence 34588999999999986321 12344 999842 1 11 00 1244333221 235689999
Q ss_pred ecCCCCCeeEEEEEEeCC--------CcceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEE
Q psy11132 73 SVSARHSGNYSCTVRNMV--------AEDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIR 139 (243)
Q Consensus 73 ~~~~~d~G~Y~C~~~~~~--------~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~ 139 (243)
+++.+|+|.|.|.+.+.. ........|.|.. +|.+...... ..+..|+.+.|.|.+..+.| +..+.
T Consensus 89 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~~~~P~~~~v~ 167 (232)
T 3qhz_H 89 NMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVS 167 (232)
T ss_dssp SCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC--------CEEEEEEEEEEEBSSCCEEE
T ss_pred cCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEeccc-ccccCCCcEEEEEEEeeEeCCCeEEE
Confidence 999999999999998652 1122334566652 2222211222 34567999999999965455 45789
Q ss_pred EEeCCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEE
Q psy11132 140 WLKDGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 197 (243)
Q Consensus 140 W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v 197 (243)
|++++..+...........++ ..+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 168 W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 168 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 999886432111111111111 13568888888888 9999999998877665555443
No 240
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.77 E-value=3.2e-18 Score=123.35 Aligned_cols=177 Identities=18% Similarity=0.266 Sum_probs=108.1
Q ss_pred CCcccccCCeEEEEEEeeCCCC----CceeEEEECC--ee---e---c----------------CCCceEEEEe-eeece
Q psy11132 17 PERTLNVGERASLICSITKGDI----PLTIKWLKDG--RY---L---D----------------NSAALSITHV-DQYNS 67 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~----~~~v~W~~~~--~~---~---~----------------~~~~~~~~~~-~~~~~ 67 (243)
....+.+|++++|.|.+. +.+ ...+.|++.. .. + . ...++.+... .....
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAVS-GDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp SCSEECTTSCEEEEEEEE-SSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCEEEcCCCCEEEEEEEc-CCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 345688999999999996 333 4589999842 11 1 1 0123333322 12346
Q ss_pred EEEEeecCCCCCeeEEEEEEeCCC-------------cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEee
Q psy11132 68 MLVIDSVSARHSGNYSCTVRNMVA-------------EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVT 130 (243)
Q Consensus 68 ~l~i~~~~~~d~G~Y~C~~~~~~~-------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~ 130 (243)
+|.|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+.... +...+..|+.+.|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~l~C~~~ 165 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLA-PSSKSTSGGTAALGCLVK 165 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEEC-CCCCC--TTEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEEC-CChhhccCCcEEEEEEEe
Confidence 799999999999999999986531 112223556642 22222122 223456799999999996
Q ss_pred cCCCC-CEEEEEeCCEecCCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEE
Q psy11132 131 HGDPP-LTIRWLKDGKPLSPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 196 (243)
Q Consensus 131 ~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~ 196 (243)
...|. ..+.|++++..+...........++ ..+.|.|.....+| |.|+|.|.|..+.......+.
T Consensus 166 ~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 166 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred eEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 54663 4689999886442111111111111 13568888888888 999999999887665554443
No 241
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.77 E-value=2.5e-18 Score=106.55 Aligned_cols=93 Identities=20% Similarity=0.456 Sum_probs=78.4
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC--ceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA--ALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.||.|...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+.... ...+|.|.+++.+|+|.|+|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~-g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFT-GEPTPEVTWSCGGRKIHSQEQGRFHIENTD-DLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEE-EESCCEEEEEETTEECCTTGGGTEEEEECS-SEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEE-EecCCEEEEEECceEeeeeccceeeeeccc-ceEEEEEcCCCccCCEEEEEE
Confidence 478888888889999999999999995 88889999999999987644 34433322 357899999999999999999
Q ss_pred EEeCCCcceeEEEEEEE
Q psy11132 86 VRNMVAEDTQVQRLIVN 102 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~ 102 (243)
|.|..|..+..+.|.|.
T Consensus 82 a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCEEEEEEEEEEE
Confidence 99999998888888876
No 242
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.76 E-value=1.4e-19 Score=128.27 Aligned_cols=178 Identities=17% Similarity=0.256 Sum_probs=108.9
Q ss_pred CCCccC-CCCCcccccCCeEEEEEEeeCCCC--CceeEEEECCeeecCCC-ceEE-E--EeeeeceEEEEeecCCCCCee
Q psy11132 9 PPKLSP-TNPERTLNVGERASLICSITKGDI--PLTIKWLKDGRYLDNSA-ALSI-T--HVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 9 ~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~~~~~~~~-~~~~-~--~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+|.+.. .+....+.+|+.++|.|.+.+..+ ++.+.| ++..+.... .... . ..-.....|.|.+++.+|.|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 455543 366677899999999999964334 268999 443332110 0000 0 000124578889999999999
Q ss_pred EEEEEEeCCCcceeEEEEE---EEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCe---e
Q psy11132 82 YSCTVRNMVAEDTQVQRLI---VNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPV---N 154 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~---v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~---~ 154 (243)
|+|.+.+..+.......+. +..+|.+.........+..|+.+.|.|.+.+.+|+ +.+.|+++|..+...... .
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 160 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWAS 160 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCC
T ss_pred EEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCC
Confidence 9999998766433333332 23455554433332346789999999999644564 599999999987654211 1
Q ss_pred EEe---eccc---eeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 155 VSD---LDSF---SSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 155 ~~~---~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
... .++. .+.|.+.....++.|.|+|.|.|....
T Consensus 161 ~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 161 RQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp EECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred cccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 111 1111 233455444345589999999997653
No 243
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.76 E-value=1.4e-18 Score=124.85 Aligned_cols=178 Identities=15% Similarity=0.233 Sum_probs=106.7
Q ss_pred CCCccCC-CCCcc-cccCCeEEEEEEeeCCC--C-CceeEEEECCeeecCCCceEEEE--ee--eeceEEEEeecCCCCC
Q psy11132 9 PPKLSPT-NPERT-LNVGERASLICSITKGD--I-PLTIKWLKDGRYLDNSAALSITH--VD--QYNSMLVIDSVSARHS 79 (243)
Q Consensus 9 ~p~~~~~-~~~~~-~~~g~~~~l~C~~~~~~--~-~~~v~W~~~~~~~~~~~~~~~~~--~~--~~~~~l~i~~~~~~d~ 79 (243)
+|.+.+. +.... +..|+.++|.|.+.+.. | ...++|+++|..+.......... .. ...+.|.|.....+|.
T Consensus 22 ~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 101 (240)
T 4acp_A 22 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 101 (240)
T ss_dssp -CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHT
T ss_pred CCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCC
Confidence 4544433 33444 55799999999997555 4 45899999999875432111000 00 1135688877777789
Q ss_pred eeEEEEEEeCCCcceeEEEEE----EEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCee
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLI----VNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN 154 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~~ 154 (243)
|.|+|.+.+..+.......+. +..+|.+...... .....|+.+.|.|.+.+.+|. ..+.|+++|..+.......
T Consensus 102 ~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~-~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~ 180 (240)
T 4acp_A 102 KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPS-RDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATP 180 (240)
T ss_dssp CCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCC-GGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECC
T ss_pred CEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCC-hHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccC
Confidence 999999998776432222222 2345555444333 222348999999999644665 4899999999865321111
Q ss_pred EE-eeccc---eeEEEEeecCCCCCeeEEEEEEccCc
Q psy11132 155 VS-DLDSF---SSLLSINSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 155 ~~-~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g 187 (243)
.. ..++. .+.|.+.....++.|.|+|.|.+..-
T Consensus 181 ~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 181 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 11 11111 24566666555678999999999764
No 244
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.76 E-value=2.6e-17 Score=117.93 Aligned_cols=177 Identities=16% Similarity=0.284 Sum_probs=109.9
Q ss_pred CcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e---c-----------CCCceEEEEee-eeceEEEEeecCC
Q psy11132 18 ERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L---D-----------NSAALSITHVD-QYNSMLVIDSVSA 76 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~---~-----------~~~~~~~~~~~-~~~~~l~i~~~~~ 76 (243)
...+.+|++++|.|.+... .....+.|||.. .. + . ...++.+.... ....+|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 4568899999999998631 234589999732 11 1 0 12344433222 2346799999999
Q ss_pred CCCeeEEEEEEeCCC------c--ceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeC
Q psy11132 77 RHSGNYSCTVRNMVA------E--DTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKD 143 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~------~--~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~ 143 (243)
+|+|.|.|.+.+..+ . ......|.|.. +|.+.... +...+..|+.+.|.|.+.+..| ++.+.| +
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~ 165 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLA-PSSKSTSGGTAALGCLVKDYFPEPVTVSW--N 165 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEC-CCCCCCTTCEEEEEEEEEEEBSSCCEEEE--G
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecC-CCccccCCCCEEEEEEEEeEECCCEEEEE--C
Confidence 999999999987531 1 12334566642 22222112 2234568999999999965556 568999 5
Q ss_pred CEecCCCCCe--eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 144 GKPLSPRFPV--NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 144 ~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+..+...... .....++ ..+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred CcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 5444321110 0011111 13578899888889 99999999988776655555544
No 245
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=2.2e-17 Score=105.11 Aligned_cols=101 Identities=22% Similarity=0.371 Sum_probs=85.9
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+... .....|.|.+++.+|+|.|+|.+
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVT-GTQPITCTWMKFRKQIQESEHMKVENS-ENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEE-SSSSCEEEEEESSSBCCCSSSEEEEEC-SSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEE-cCCCCEEEEEECCEECcCCCCEEEEEc-CCEEEEEECCCChhcCEEEEEEE
Confidence 3578888888889999999999999996 788889999999999887766665533 23578999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCCccc
Q psy11132 87 RNMVAEDTQVQRLIVNVPPKIES 109 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~~~~ 109 (243)
.|..+.....+.|.|...|..+.
T Consensus 83 ~N~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 83 ENKLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp ECSSCEEECCEEEEEECSCSCCC
T ss_pred EECCCcEEEEEEEEEECCCCCCC
Confidence 99999888889999988776543
No 246
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.76 E-value=8.7e-19 Score=128.80 Aligned_cols=188 Identities=19% Similarity=0.243 Sum_probs=64.3
Q ss_pred eeEEEecCCCcc-CCCCCcccccCCeEEEEEEeeCCCCCc--eeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCC
Q psy11132 2 LVIFSTVPPKLS-PTNPERTLNVGERASLICSITKGDIPL--TIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARH 78 (243)
Q Consensus 2 ~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 78 (243)
+.|.|+.+|... +......+.+|+.++|+|.+.++.|.. .|+|+|++..+...... .......|.+...+.++
T Consensus 78 v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~----~~~~~~~l~~~~~~~D~ 153 (291)
T 1mq8_A 78 TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV----GEPAEVTTTVLVRRDHH 153 (291)
T ss_dssp CEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC----BTTEEEEEECCCSSSCS
T ss_pred EEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC----CCCceEEEEeeeeeccC
Confidence 467888777543 334445588999999999997666654 68999999877543211 11123456666555555
Q ss_pred CeeEEEEEEeCCCc--------ceeEEEEEEEcCCCccc-cccCCCCCCCCCcEEEEEEeecCCCCC---EEEEEeCCEe
Q psy11132 79 SGNYSCTVRNMVAE--------DTQVQRLIVNVPPKIES-FAFPFDGLPEGARTRVICGVTHGDPPL---TIRWLKDGKP 146 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~--------~~~~~~l~v~~~p~~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~---~~~W~~~~~~ 146 (243)
.+.|+|.|.+..+. .+....|.|.++|.... ...+ ..+.+|+.+.|.|.+ .|.+++ .+.|+++|..
T Consensus 154 g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p-~~l~eG~~v~l~C~~-~g~~P~~~~~v~w~~~g~~ 231 (291)
T 1mq8_A 154 GANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSP-RVLEVDTQGTVVCSL-DGLFPVSEAQVHLALGDQR 231 (291)
T ss_dssp SCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------------
T ss_pred CceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCC-cCccCCCeEEEEEEc-CCCCCCcccEEEEEECCEe
Confidence 56999999986442 34556788887754322 1112 356789999999999 565443 6999999998
Q ss_pred cCCCCCeeEEeeccceeEEEEeecCC--CCCeeEEEEEEccCcceeeeEEEEEEe
Q psy11132 147 LSPRFPVNVSDLDSFSSLLSINSVSA--AHSGEYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~i~~~~~--~d~g~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
+...... ..+.....+.+ .+.. ++.+.|+|.|.+.....+....|.|.+
T Consensus 232 l~~~~~~---~g~~~~~~~~~-~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~ 282 (291)
T 1mq8_A 232 LNPTVTY---GNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (291)
T ss_dssp -------------------------------------------------------
T ss_pred cCceeee---cCCeEEEEEec-ceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc
Confidence 8753211 11111111221 1123 335688899988665566666777763
No 247
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.75 E-value=4.8e-17 Score=111.07 Aligned_cols=162 Identities=15% Similarity=0.133 Sum_probs=107.7
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC-CeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCc
Q psy11132 14 PTNPERTLNVGERASLICSITKGDIPLTIKWLKD-GRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAE 92 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 92 (243)
..++...+.+|+++.|+|.+. ...+..+.|... ++.... ..+.....|.|.+++. | |.|.|.+......
T Consensus 4 v~P~~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~-------~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~ 73 (185)
T 1iam_A 4 VSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELL-------LPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQ 73 (185)
T ss_dssp EESSEEEEETTEEEEEEEEEC-SSSCSEEEEECSSCEEEEC-------SSSSSEEEEEEEEECS-C-BCCEEEEECSSCE
T ss_pred EECCCcEEeCCCCEEEEEEcc-CCCCccceEEeeCCCccEe-------ccCCceeEEEEEecCc-C-CEEEEEEECCCCc
Confidence 345566799999999999984 333334777531 111110 0011135688999974 4 9999999765556
Q ss_pred ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC--EEEEEeCCEecCCCCCeeEEeeccceeEEEEeec
Q psy11132 93 DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL--TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV 170 (243)
Q Consensus 93 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 170 (243)
....+.|.|..+|...........+.+|+.++|.|.+.++.|.. .+.|++++..+..... .....+.+|.+...
T Consensus 74 ~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~----~~~~~~~tl~~~~~ 149 (185)
T 1iam_A 74 STAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA----VGEPAEVTTTVLVR 149 (185)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC----CTTTEEEEEEEECC
T ss_pred eEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccC----CCccccEEEEEece
Confidence 77888999998887655544434478999999999997667764 5899999988764210 01112345666544
Q ss_pred CCCCCeeEEEEEEccCcce
Q psy11132 171 SAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g~~ 189 (243)
..+|...|+|.|.|..+..
T Consensus 150 reD~g~~~sC~A~~~l~~~ 168 (185)
T 1iam_A 150 RDHHGAQFSCRTELDLRPQ 168 (185)
T ss_dssp SSCSSCEEEEEEEEECGGG
T ss_pred eccCCCeEEEEEEecCccc
Confidence 4444449999999988744
No 248
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.75 E-value=1.5e-17 Score=127.60 Aligned_cols=167 Identities=13% Similarity=0.202 Sum_probs=107.2
Q ss_pred cccCCeEEEEEEeeCCC--C-CceeEEEECCeeecCCCc---eEEE-EeeeeceEEEEeecCCCCCeeEEEEEEeCCCcc
Q psy11132 21 LNVGERASLICSITKGD--I-PLTIKWLKDGRYLDNSAA---LSIT-HVDQYNSMLVIDSVSARHSGNYSCTVRNMVAED 93 (243)
Q Consensus 21 ~~~g~~~~l~C~~~~~~--~-~~~v~W~~~~~~~~~~~~---~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 93 (243)
+.+|+.++|.|.+.+.. | ...|.|++++..+..... .... ..-.....|.|..++.+|.|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 77899999999996442 3 247999999866532110 0000 001124579999999999999999999876643
Q ss_pred eeEEEE----EEEcCCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCCCCeeE-Eeecc---ceeE
Q psy11132 94 TQVQRL----IVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNV-SDLDS---FSSL 164 (243)
Q Consensus 94 ~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~~~~~~-~~~~~---~~~~ 164 (243)
.....+ .+..+|.+...+.. .....|+.+.|.|.+.+.+| .+.++|+++|..+........ ...++ ..+.
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~-~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~ 338 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPP-KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSK 338 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCC-HHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEE
Confidence 322233 33445555444333 23345899999999964355 579999999988754222111 11111 1345
Q ss_pred EEEeecCCCCCeeEEEEEEccCcc
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
|.+.....+|.|.|+|.|.|....
T Consensus 339 L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 339 LNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred EEEcHHHhCCCCcEEEEEEeCCCC
Confidence 777766677899999999997643
No 249
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.75 E-value=5.6e-18 Score=106.23 Aligned_cols=82 Identities=26% Similarity=0.436 Sum_probs=71.3
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .|.|.+.+.|+++|..+....++.+.. +.....|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 23 ~~v~~G~~~~l~C~~-~G~P~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 100 (107)
T 3knb_B 23 VRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLAASERLSFPA-DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAA 100 (107)
T ss_dssp EEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEECCE-ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCcEEEEEEE-EEecCCEEEEEECcccccceeeEEEee-cCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEE
Confidence 557789999999999 599999999999999998776655433 334678999999999999999999999999999999
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 101 l~V~ 104 (107)
T 3knb_B 101 VTVL 104 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 250
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.74 E-value=1.5e-17 Score=120.96 Aligned_cols=156 Identities=17% Similarity=0.170 Sum_probs=84.1
Q ss_pred cCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCC-----CCEEEEEeCC--Ee
Q psy11132 74 VSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-----PLTIRWLKDG--KP 146 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-----~~~~~W~~~~--~~ 146 (243)
++..|+|.|+|.|. +.....+.+.+..++.+...+ ....+.+|+++.|.|.+ .+.| .+.+.|++++ ..
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~g~~ 85 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELVMTQSP-LTLSVTIGQPASISCKS-SQSLLYSNGKTYLNWLLQRPGQS 85 (254)
T ss_dssp ------------------------------CCCEEEEC-SEEEECTTSCEEEEEEE-SSCCBCSSSCBCEEEEEECTTSC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeeceeEEeCC-ceEEecCCCcEEEEeec-cCcccccCCCCceEEEEeCCCCC
Confidence 67899999999998 333333334443344443322 22567899999999999 5766 3899999743 21
Q ss_pred c----------C--CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeEEEEEEeecCCCCCeeeeec-
Q psy11132 147 L----------S--PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVKGNLNRLPPSYTLVF- 212 (243)
Q Consensus 147 ~----------~--~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~~- 212 (243)
+ . ...+..... ......|.|.+++.+|+|.|.|.|.|..+... ....+.|.. ...+|.+.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--~~~~P~v~~~~~ 162 (254)
T 2c1o_A 86 PKRLIYLVSKLDSGDPDRFTGSG-SGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR--ADAAPTVSIFPP 162 (254)
T ss_dssp CEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC--CCBCCEEEEECC
T ss_pred ceEEEEeccccCCCccceEEEec-CCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC--CCCCCeeEeecC
Confidence 1 1 112222222 33456899999999999999999999866432 234555542 12356665432
Q ss_pred ------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 213 ------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 213 ------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
++.+.+.|....+ + .+.|+++|..+
T Consensus 163 ~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 197 (254)
T 2c1o_A 163 SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 197 (254)
T ss_dssp CHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEE
T ss_pred ChhhccCCcEEEEEEEecccCCCcEEEEEECCCcc
Confidence 5678899988663 2 48999999765
No 251
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=103.55 Aligned_cols=97 Identities=19% Similarity=0.331 Sum_probs=80.2
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.................|.|.+++.+|+|.|+|.+
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVS-GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECE-EESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEE-eeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEE
Confidence 4678888888888899999999999995 778889999999998877654433333333468999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcC
Q psy11132 87 RNMVAEDTQVQRLIVNVP 104 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~ 104 (243)
.|..|.....+.|.|...
T Consensus 82 ~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 82 KNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EcCCCeEEEEEEEEEEec
Confidence 999998888888888754
No 252
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.73 E-value=7.9e-17 Score=102.71 Aligned_cols=101 Identities=19% Similarity=0.298 Sum_probs=84.3
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC-CCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN-SAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
...+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++.+........+|.|.+++.+|+|.|+|
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~-g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQIS-AIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTV 90 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBC-CBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEE
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEe-ccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEE
Confidence 34688999888899999999999999995 788889999999998874 4455554433334589999999999999999
Q ss_pred EEEeCCCcceeEEEEEEEcCCCc
Q psy11132 85 TVRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
.+.|..|.....+.|.|..+|..
T Consensus 91 ~a~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 91 SAVNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EEEETTEEEEEEEEEEEECCSCC
T ss_pred EEEcCCCeEEEEEEEEEeCCCCC
Confidence 99999998888899999877654
No 253
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=3.6e-17 Score=101.35 Aligned_cols=95 Identities=20% Similarity=0.282 Sum_probs=80.0
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+............|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEE-EESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEE-EeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 467777777788899999999999996 7788899999999999877666554444446789999999999999999999
Q ss_pred eCCCcceeEEEEEEEc
Q psy11132 88 NMVAEDTQVQRLIVNV 103 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~ 103 (243)
|..|.....+.|.|..
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCcEEEEEEEEEec
Confidence 9999888888888764
No 254
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.3e-17 Score=100.95 Aligned_cols=93 Identities=23% Similarity=0.318 Sum_probs=77.9
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+.+..+.+|+.+.|.|.+ .|.+.+.|+|+|..+....++.+.... ....|.|.+++.+|+|.|+|.+.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~~~~r~~i~~~~-~~~~L~I~~v~~~D~G~Y~C~a~ 81 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI---SENIPGKWTKNGLPVQESDRLKVVQKG-RIHKLVIANALTEDEGDYVFAPD 81 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC---SSCCCEEEEETTEECCCCSSEEEEECS-SEEEEEESSCCGGGCSEEEEEES
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe---CCCCeEEEEECCEECCCCCcEEEEEeC-CEEEEEECCCChhhCEEEEEEEc
Confidence 46788888888999999999999998 566789999999999887777665433 24689999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCCC
Q psy11132 88 NMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~ 106 (243)
|. ..+..+.|.|.++|.
T Consensus 82 N~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 82 AY--NVTLPAKVHVISGPS 98 (100)
T ss_dssp SS--CCCEEEEEEEECCSC
T ss_pred CC--CeeEEEEEEEeCCCC
Confidence 87 556778888887764
No 255
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.72 E-value=9.6e-17 Score=116.81 Aligned_cols=178 Identities=18% Similarity=0.282 Sum_probs=106.6
Q ss_pred CCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e--------------cCCCceEEEEee-eeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L--------------DNSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~--------------~~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+... .....+.|+|.. .. + ....++.+.... ....+|+|.+++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 34668899999999998632 224589999732 11 1 012344443222 235679999999
Q ss_pred CCCCeeEEEEEEeCCC-----------cceeEEEEEEEcC----CCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEE
Q psy11132 76 ARHSGNYSCTVRNMVA-----------EDTQVQRLIVNVP----PKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIR 139 (243)
Q Consensus 76 ~~d~G~Y~C~~~~~~~-----------~~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~ 139 (243)
.+|+|.|.|.+.+..+ .......|.|... |.+...... ..+..|+.+.|.|.+....| ++.+.
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~~~~p~~~~v~ 189 (256)
T 3sob_H 111 AEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVS 189 (256)
T ss_dssp GGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC------TTEEEEEEEEEEEBSSCCEEE
T ss_pred cccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCC-cccccCCcEEEEEEEEEEECCCeEEE
Confidence 9999999999986431 1122345666532 222211211 34568999999999965566 56899
Q ss_pred EEeCCEecCCCCCe--eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 140 WLKDGKPLSPRFPV--NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 140 W~~~~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
| ++..+...... .....++ ..+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 190 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 190 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred E--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 9 44443321110 0011111 13568899888889 99999999988766555554433
No 256
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.72 E-value=1.8e-16 Score=112.05 Aligned_cols=122 Identities=23% Similarity=0.372 Sum_probs=91.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC-CCCCeeEEeeccceeEEEEeecCC-CCCeeEEEEEEccCcc-eee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS-PRFPVNVSDLDSFSSLLSINSVSA-AHSGEYTCVASNTAAQ-ARY 191 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~n~~g~-~~~ 191 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ................|.|.++.. +|+|.|+|.|.|..|. ...
T Consensus 16 ~~v~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~ 94 (212)
T 2yd1_A 16 QGVRVGGVASFYCAA-RGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSA 94 (212)
T ss_dssp EEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEE
T ss_pred eEEecCCEEEEEEEE-ccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEe
Confidence 557789999999999 588999999999999987 333344444444457899999999 9999999999999988 677
Q ss_pred eEEEEEEeecC--CCCCee-------eeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 192 SSKLQVKGNLN--RLPPSY-------TLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 192 ~~~l~v~~~~~--~~~p~~-------~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.+.|.|..... ..+|.+ .+..++.+.+.|.....+ .+.|+++|..+
T Consensus 95 ~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~ 151 (212)
T 2yd1_A 95 DATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKV 151 (212)
T ss_dssp EEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEEC
T ss_pred eEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEc
Confidence 78888874321 112443 334577788888775544 79999998654
No 257
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.72 E-value=5.5e-17 Score=114.74 Aligned_cols=123 Identities=24% Similarity=0.289 Sum_probs=92.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeec-CCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV-SAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .|.|.+.+.|++++..+.................|.|.++ ..+|+|.|+|.|.|..|.....+
T Consensus 16 ~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~ 94 (212)
T 2yd6_A 16 QTGVSGGVASFICQA-TGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVST 94 (212)
T ss_dssp EEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEE
T ss_pred eEEecCCeEEEEEEE-eeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEE
Confidence 456789999999999 4889999999999999876544333333344678999999 49999999999999999888888
Q ss_pred EEEEEeec--CCCCCee-------eeeccceeeeccCcccc--cccceEEeCCeeE
Q psy11132 194 KLQVKGNL--NRLPPSY-------TLVFSQASYMSTSYYSF--EQDSWMIDNENYV 238 (243)
Q Consensus 194 ~l~v~~~~--~~~~p~~-------~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~~ 238 (243)
.|.|.... +..+|.+ .+..+..+.+.|...+. +.+.|+++|..+.
T Consensus 95 ~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~ 150 (212)
T 2yd6_A 95 RLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVD 150 (212)
T ss_dssp EEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC-
T ss_pred EEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCcccc
Confidence 88887432 1122333 34456677888876554 4899999986653
No 258
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.72 E-value=3e-17 Score=101.65 Aligned_cols=83 Identities=18% Similarity=0.291 Sum_probs=69.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCee-EEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVN-VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .|.|.|.+.|++++..+....... ........+.|.|.+++.+|+|.|+|.|.|..|..+.++
T Consensus 15 ~~v~~G~~~~l~C~~-~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 93 (100)
T 3knb_A 15 ISIDEGKVLTVACAF-TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATV 93 (100)
T ss_dssp EEEETTSEEEEEEEE-EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEEeCCCeEEEEEEE-EEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEE
Confidence 457789999999999 599999999999999987654321 222333457899999999999999999999999999899
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.|.|.
T Consensus 94 ~l~V~ 98 (100)
T 3knb_A 94 NIHIR 98 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88886
No 259
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.71 E-value=1.5e-16 Score=113.58 Aligned_cols=171 Identities=17% Similarity=0.273 Sum_probs=104.1
Q ss_pred CcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e---c-----------CCCceEEEEee-eeceEEEEeecCC
Q psy11132 18 ERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L---D-----------NSAALSITHVD-QYNSMLVIDSVSA 76 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~---~-----------~~~~~~~~~~~-~~~~~l~i~~~~~ 76 (243)
...+.+|++++|.|.+... .+...+.|+|.. .. + . ...++.+.... ....+|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 4568899999999998632 234589999842 11 1 0 11344443222 2356799999999
Q ss_pred CCCeeEEEEEEeCCC---------cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEe
Q psy11132 77 RHSGNYSCTVRNMVA---------EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLK 142 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~---------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~ 142 (243)
+|+|.|.|.+.+..+ .-.....|.|.. +|.+...... ..+..|+.+.|.|.+....| ++.+.|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~~v~W-- 165 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSW-- 165 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEE-ECSTTSSEEEEEEEEEEEBSSCCEEEE--
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCc-ccccCCCCEEEEEEEEEEECCCeEEEE--
Confidence 999999999976421 111223556643 2222211111 34568999999999975566 678999
Q ss_pred CCEecCCCCCe--eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 143 DGKPLSPRFPV--NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 143 ~~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
++..+...... .....++ ..+.|.|.....+| |.|+|.|.|..+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 166 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 44333211100 0111111 13568898888888 99999999987765433
No 260
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.71 E-value=2.6e-17 Score=102.78 Aligned_cols=98 Identities=18% Similarity=0.260 Sum_probs=82.0
Q ss_pred EEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 5 FSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 5 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
.+..+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+... .....|.|.+++.+|+|.|+|
T Consensus 4 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 4 TLDHAPRITLRMRSHRVPCGQNTRFILNVQ-SKPTAEVKWYHNGVELQESSKIHYTNT-SGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TTCEEEEEEECCCCEEEETTCCEEEEEEEE-EESCCEEEEEETTEECCCCSSEEEEEE-TTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCCEEEeCCcceEEeCCCeEEEEEEEE-ecCCCEEEEEECCEECCCCCCEEEEEC-CCEEEEEEcCCCcccCEEEEE
Confidence 345678888778888999999999999995 788889999999999987776655432 234689999999999999999
Q ss_pred EEEeCCCcceeEEEEEEEcC
Q psy11132 85 TVRNMVAEDTQVQRLIVNVP 104 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~ 104 (243)
.+.|..|..+..+.|.|...
T Consensus 82 ~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 82 VCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEeCCCcEEEEEEEEEECC
Confidence 99999998888888888754
No 261
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=9.3e-17 Score=101.48 Aligned_cols=100 Identities=19% Similarity=0.256 Sum_probs=82.6
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC-CCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN-SAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++.+.........|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVA-GNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBC-CSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEE-ecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 4688888888888999999999999995 788889999999998875 44555444333345899999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCCCc
Q psy11132 86 VRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
+.|..+.....+.|.|..+|..
T Consensus 85 a~N~~g~~~~~~~l~V~~~~~~ 106 (110)
T 2dm2_A 85 AANPQGRISCTGRLMVQAVNSG 106 (110)
T ss_dssp EECTTCCEEECCCEEEECCSCC
T ss_pred EEECCCeEEEEEEEEEECCCCC
Confidence 9999998888888888876643
No 262
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.71 E-value=1.4e-16 Score=116.32 Aligned_cols=175 Identities=18% Similarity=0.320 Sum_probs=102.5
Q ss_pred CcccccCCeEEEEEEeeCCC-CCceeEEEECC--ee---e-------------cCCCceEEEEee-eeceEEEEeecCCC
Q psy11132 18 ERTLNVGERASLICSITKGD-IPLTIKWLKDG--RY---L-------------DNSAALSITHVD-QYNSMLVIDSVSAR 77 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~-~~~~v~W~~~~--~~---~-------------~~~~~~~~~~~~-~~~~~l~i~~~~~~ 77 (243)
.+.+.+|++++|.|.+.... ....+.|||.. .. + ....++.+.... ....+|.|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 35588999999999986322 24589999732 11 1 012344443222 23467999999999
Q ss_pred CCeeEEEEEEeCCC--------cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEEEEeecCCC-CCEEEEEeCC
Q psy11132 78 HSGNYSCTVRNMVA--------EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDG 144 (243)
Q Consensus 78 d~G~Y~C~~~~~~~--------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~ 144 (243)
|+|.|.|.+.+... .......|.|.. +|.+.... +...+..|+.+.|.|.+.+..| ++.++| ++
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~-~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~ 165 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLA-PSSKGSTSGTAALGCLVKDYFPEPVTVSW--NS 165 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEEC-CCCCC----EEEEEEEEEEEBSSCCEEEE--GG
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEcc-CccccccCCcEEEEEEEEeEeCCceEEEE--CC
Confidence 99999999987531 111234566642 22222112 2234568999999999976566 478999 44
Q ss_pred EecCCCCCe--eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEE
Q psy11132 145 KPLSPRFPV--NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 196 (243)
Q Consensus 145 ~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~ 196 (243)
..+...... .....++ ..+.|.|.....+| |.|+|.|.|..+.......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 166 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred cccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 333221100 0011111 13568888777778 999999999887654444433
No 263
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.71 E-value=2.2e-16 Score=110.22 Aligned_cols=122 Identities=14% Similarity=0.219 Sum_probs=93.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC-CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF-PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... .............|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 14 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 92 (197)
T 2j8h_A 14 LNVRYQSNATLVCKV-TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTA 92 (197)
T ss_dssp EEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEE
T ss_pred cEEcCCCEEEEEEEE-eecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEE
Confidence 556789999999999 588999999999999887543 333333344456899999999999999999999999888888
Q ss_pred EEEEEeecCCCC-------CeeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 194 KLQVKGNLNRLP-------PSYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~~~~~-------p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.|.|...+.... ....+..+..+.+.|.....+ .+.|+++|..+
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~ 145 (197)
T 2j8h_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLI 145 (197)
T ss_dssp EEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEE
T ss_pred EEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEe
Confidence 888874332121 123455677888889776554 89999998765
No 264
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=1.1e-16 Score=112.65 Aligned_cols=168 Identities=18% Similarity=0.234 Sum_probs=100.4
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--ee---e-------cCCCceEEEEe--eeeceEEEEeecCCCCC
Q psy11132 14 PTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RY---L-------DNSAALSITHV--DQYNSMLVIDSVSARHS 79 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~---~-------~~~~~~~~~~~--~~~~~~l~i~~~~~~d~ 79 (243)
..+..+.+.+|++++|.|.+. +.+ ..+.|+|.. .. + ....++.+... .....+|+|.+++.+|+
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~-~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 6 QSPSALSLHEGTDSALRCNFT-TTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp ESCSEEEEETTCCEEEEEEES-SCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred ECCCeEEEccCCcEEEEEEEe-CCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 345567799999999999985 433 379999853 11 1 01234443322 12346899999999999
Q ss_pred eeEEEEEEeCCC---------c--ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEec
Q psy11132 80 GNYSCTVRNMVA---------E--DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPL 147 (243)
Q Consensus 80 G~Y~C~~~~~~~---------~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~ 147 (243)
|.|.|.+.+..+ . ......|.|.........+ ...+.. ..+.|.|.+.+..|. +.+.|+++ ..+
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P--~v~~~~-~~~~l~C~~~g~~P~~~~v~W~~~-~~l 159 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP--SVFIMK-NGTNVACLVKDFYPKEVTISLRSS-KKI 159 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC--EEEEEE-ETTEEEEEEEEESSSCCEEEEECS-SEE
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC--eEEEeC-CCCeEEEEEeeEeCCCeEEEEecC-Ccc
Confidence 999999987632 1 1133567776422111110 011111 136899999655664 79999998 655
Q ss_pred CCCCCeeEEeeccceeEEEEeecCC-CCCeeEEEEEEccCccee
Q psy11132 148 SPRFPVNVSDLDSFSSLLSINSVSA-AHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~n~~g~~~ 190 (243)
...........+ +.+.+..... ++.|.|+|.|.|..+...
T Consensus 160 ~~~~~~~~~~~~---g~y~~~~~~~~~~~~~ytC~v~~~~~~~~ 200 (207)
T 1ypz_E 160 VEFDPAIVISPS---GKYSAVKLGQYGDSNSVTCSVQHNSETVH 200 (207)
T ss_dssp EECCCEEEECTT---SSEEEEECEEESSTTTCEEEEEETTEEEE
T ss_pred cCCccceEEcCC---CcEEEEEeecccCCCcEEEEEEECCccEe
Confidence 432221111111 2223323333 678999999999876543
No 265
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.70 E-value=4.8e-17 Score=102.46 Aligned_cols=102 Identities=22% Similarity=0.424 Sum_probs=70.9
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
+.|.+..+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+.... .....|.|.+++.+|+|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~D~G~ 78 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTAS-GNPPPQIMWFKDNETLVEDSGIVLK---DGNRNLTIRRVRKEDEGL 78 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC-----CCEEEEESSSBCCCBTTEEEE---TTTTEEEECSCCGGGCEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECc-CcCCCeEEEEECCeEcccCCCeEEe---CCCcEEEEeecCcccCEE
Confidence 466778899999888889999999999999994 7788899999999888765554332 225789999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCc
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
|+|.+.|..|.....+.|.|..+|..
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 79 YTCQACSVLGCAKVEAFFIIEGAQEK 104 (108)
T ss_dssp EEEEEC----CEEEEEEEEEEC----
T ss_pred EEEEEEeCCCceEEEEEEEEeCCCcc
Confidence 99999999999888899999876643
No 266
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.70 E-value=5.3e-17 Score=108.95 Aligned_cols=105 Identities=23% Similarity=0.313 Sum_probs=84.7
Q ss_pred EEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 5 FSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 5 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
.+..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.........|.|.+++..|+|.|+|
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 115 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVE-GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTC 115 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEE-EESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEE
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEE-EecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEE
Confidence 445678888887888999999999999995 7788899999999999877776655433335789999999999999999
Q ss_pred EEEeCCCcceeEEEEEEEcCCCcccc
Q psy11132 85 TVRNMVAEDTQVQRLIVNVPPKIESF 110 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~p~~~~~ 110 (243)
.+.|..|.....+.|.|..+|.+...
T Consensus 116 ~a~N~~G~~~~~~~l~V~~~p~~~~~ 141 (154)
T 1fhg_A 116 KAVNSLGEATCTAELLVETMGKEGEG 141 (154)
T ss_dssp EEEETTEEEEEEEEEEEECC------
T ss_pred EEEECCCeEEEEEEEEEeCcCcCCCC
Confidence 99999999888899999887766543
No 267
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.70 E-value=1.2e-16 Score=99.03 Aligned_cols=95 Identities=16% Similarity=0.250 Sum_probs=77.1
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.................|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQ-GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEE-EESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEE-EcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 467777777788899999999999995 7788899999999988765443333323334589999999999999999999
Q ss_pred eCCCcceeEEEEEEEc
Q psy11132 88 NMVAEDTQVQRLIVNV 103 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~ 103 (243)
|..+.....+.|.|..
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 83 NEYGARQCEARLEVRG 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCceeEEEEEEEEC
Confidence 9999888888888753
No 268
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.69 E-value=6.6e-16 Score=96.20 Aligned_cols=97 Identities=14% Similarity=0.269 Sum_probs=75.4
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEe----eeeceEEEEeecCCCCCee
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHV----DQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~d~G~ 81 (243)
|..||.+..... ...|+.+.|.|.+. |.|.+.+.|+++|..+....+...... ....+.|.|.+++.+|+|.
T Consensus 1 V~~pP~i~~~~~---~~~~~~~~~~c~v~-G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 76 (103)
T 1wwb_X 1 VHFAPTITFLES---PTSDHHWCIPFTVK-GNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGD 76 (103)
T ss_dssp CCCCCCCCCCCC---CCCCCEEEEEEEEE-CSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred CCCCCEEEeccC---ceECcEEEEEEEEE-EeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEE
Confidence 356888753322 34688999999995 899999999999999987655322211 1224569999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCC
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~ 106 (243)
|+|.|.|..|.....+.|.|..+|.
T Consensus 77 Y~C~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 77 YTLIAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp EEEEEECSSCEEEEEEEECCSCCCC
T ss_pred EEEEEEeCCCcEeEEEEEEECCCCC
Confidence 9999999999999999988877664
No 269
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=3.8e-17 Score=103.32 Aligned_cols=99 Identities=19% Similarity=0.358 Sum_probs=82.8
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.+|.+...+....+.+|+.++|.|.+. +.|.+.+.|++++..+.................|.|.+++.+|+|.|+|.+.
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVS-GLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEE-CSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEE-EcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 578888888888999999999999995 7888899999999888765554443333335689999999999999999999
Q ss_pred eCCCcceeEEEEEEEcCCCc
Q psy11132 88 NMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~ 107 (243)
|..+.....+.|.|..+|..
T Consensus 87 n~~g~~~~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKESG 106 (110)
T ss_dssp CSSCEEEECCEEEEECCCCS
T ss_pred CCCCEEEEEEEEEEeCCCCC
Confidence 99998888889999877654
No 270
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.69 E-value=1e-16 Score=100.73 Aligned_cols=97 Identities=26% Similarity=0.410 Sum_probs=79.7
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVL-GEPPPVVVWEKGGQQLAASERLSFPADG-AEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEE-EESCCEEEEEETTEECCCCSSEECCEET-TEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEe-ecCCCEEEEEECCeECCCCCcEEEEeCC-CEEEEEEccCCHHhCEEEEEEE
Confidence 3578888888888999999999999995 7788899999999998776665544322 2458999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCC
Q psy11132 87 RNMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p 105 (243)
.|..+.....+.|.|..+|
T Consensus 89 ~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 89 RNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EETTEEEEEEEEEEEEC--
T ss_pred EcCCCcEEEEEEEEEEcCC
Confidence 9999988888888887654
No 271
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.68 E-value=2.6e-16 Score=109.80 Aligned_cols=121 Identities=21% Similarity=0.345 Sum_probs=94.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.+.|..|.....+.
T Consensus 17 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 94 (197)
T 3lcy_A 17 VTTKLGEAAQLSCQI-VGRPLPDIKWYRFGKELIQSRKYKMSS-DGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSK 94 (197)
T ss_dssp EEEETTSEEEEEEEE-EEESCCEEEEEETTEEECCCSSEEEEE-SSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eEEeCCCcEEEEEEE-ecCCCCEEEEEECCEECCCCccEEEEe-CCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEE
Confidence 456789999999999 578889999999999887665544432 334568999999999999999999999998888888
Q ss_pred EEEEeecCC-----CCCeeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 195 LQVKGNLNR-----LPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 195 l~v~~~~~~-----~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
+.|...+.. .+....+..+..+.+.|.....+ .+.|+++|..+
T Consensus 95 l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~ 144 (197)
T 3lcy_A 95 LLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLL 144 (197)
T ss_dssp EEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEEC
T ss_pred EEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEEC
Confidence 877643321 22445567788889999876554 89999988654
No 272
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.68 E-value=1.8e-16 Score=97.04 Aligned_cols=90 Identities=21% Similarity=0.322 Sum_probs=73.8
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--eeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++ ..+....... .......|.|.+++.+|+|.|+|.
T Consensus 1 ~~P~i~~~~~~~~v~~G~~~~l~C~~~-g~P~p~i~W~k~~~~~~~~~~~~~~---~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 1 LKPKILTASRKIKIKAGFTHNLEVDFI-GAPDPTATWTVGDSGAALAPELLVD---AKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCCEECCCCCEEEECTTBCCEEEEEEE-CCSSCEEEEECSTTTCBCSTTSEEE---EETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCCeEEcCCCceEEeCCCEEEEEEEEE-EcCCCEEEEEECCCCcccCCcEEEE---ecCCEEEEEECCCChhcCEEEEEE
Confidence 367887777788899999999999995 8888999999999 7776543222 122357899999999999999999
Q ss_pred EEeCCCcceeEEEEEE
Q psy11132 86 VRNMVAEDTQVQRLIV 101 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v 101 (243)
|.|..|..+..+.|.|
T Consensus 77 a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 77 VKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEE
Confidence 9999998887777776
No 273
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=3.5e-16 Score=100.09 Aligned_cols=97 Identities=22% Similarity=0.393 Sum_probs=78.0
Q ss_pred EecCCCccCC---CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeE
Q psy11132 6 STVPPKLSPT---NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 6 v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 82 (243)
+..+|.+... .....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. .+..+.. ......|.|.+++.+|+|.|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~-g~P~p~i~W~k~g~~l~~-~~~~~~~-~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQ-GKPRPQVVWTKGGAPLDT-SRVHVRT-SDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEE-EESCCEEEEEETTEECCC-SSCEEEE-CSSEEEEEESSCCTTTCEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEc-cCCCCEEEEEECCEECCC-CcEEEEE-CCCeEEEEECCCChhcCEEE
Confidence 4457777542 4567899999999999995 888889999999998863 4444332 22356799999999999999
Q ss_pred EEEEEeCCCcceeEEEEEEEcCC
Q psy11132 83 SCTVRNMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 83 ~C~~~~~~~~~~~~~~l~v~~~p 105 (243)
+|.+.|..|.....+.|.|..+|
T Consensus 95 ~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 95 ELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEeCCCeEEEEEEEEEEcCC
Confidence 99999999988888999998765
No 274
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.68 E-value=2.9e-16 Score=97.25 Aligned_cols=94 Identities=21% Similarity=0.350 Sum_probs=78.7
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a 81 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKAT-GEPRPTAIWTKDGKAITQGGKYKLSEDK-GGFFLEIHKTDTSDSGLYTCTV 81 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEE-EESCCEEEEEETTEECCSSSSEEEEEET-TEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEE-ecCCCEEEEEECCEECcCCCCEEEEEeC-CEEEEEECCCCcccCEEEEEEE
Confidence 3567777777788899999999999995 7788899999999999877776654332 2468999999999999999999
Q ss_pred EeCCCcceeEEEEEEE
Q psy11132 87 RNMVAEDTQVQRLIVN 102 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~ 102 (243)
.|..+.....+.|.|.
T Consensus 82 ~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 82 KNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEeEEEEEEEE
Confidence 9999988888888775
No 275
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=3e-16 Score=97.36 Aligned_cols=94 Identities=27% Similarity=0.398 Sum_probs=77.5
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC-CCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN-SAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++... ....|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKAT-GDPLPVISWLKEGFTFPGRDPRATIQ----EQGTLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEE-CSSCCEEEEEESSSEESSSCSSCEEC----TTCCEEEESCCTTTCCEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEE-EcCCCEEEEEECCEECCCCCCCEEEc----CCCEEEEccCCcccCEEEEEE
Confidence 3578888778888899999999999995 888889999999988863 2333221 245799999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCC
Q psy11132 86 VRNMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p 105 (243)
+.|..+.....+.|.|.++|
T Consensus 81 a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp EECSSCCCBCCEEEEEESCC
T ss_pred EEcCCCCEEEEEEEEEecCC
Confidence 99999988888889887653
No 276
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=106.52 Aligned_cols=118 Identities=18% Similarity=0.248 Sum_probs=87.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC--eeEEeecc----c--eeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP--VNVSDLDS----F--SSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~--~~~~~~~~----~--~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
..+.+|+.+.|.|.+..+.|.+.+.|++++..+..... ........ . .+.|.|.+++.+|+|.|+|.|.|..
T Consensus 12 ~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 91 (195)
T 2c5d_C 12 ITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGH 91 (195)
T ss_dssp EEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETT
T ss_pred eEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCC
Confidence 56789999999999943788899999999999876532 11111110 0 4689999999999999999999988
Q ss_pred cceee-eEEEEEEeecCCCCCee-------eeeccceeeeccCcccc--c-ccceEEeCCee
Q psy11132 187 AQARY-SSKLQVKGNLNRLPPSY-------TLVFSQASYMSTSYYSF--E-QDSWMIDNENY 237 (243)
Q Consensus 187 g~~~~-~~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~--~-~~~W~~~~~~~ 237 (243)
|.... .+.|.|. .+|.+ .+..+..+.+.|..... + .+.|+++|..+
T Consensus 92 ~~~~~~~~~l~V~-----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~ 148 (195)
T 2c5d_C 92 QTFVSQPGYVGLE-----GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPL 148 (195)
T ss_dssp EEEECCCEEEEEC-----CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBS
T ss_pred CceecccEEEEEe-----cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEec
Confidence 76543 4778877 44544 34456677788876544 4 79999998764
No 277
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.67 E-value=1.3e-14 Score=109.99 Aligned_cols=171 Identities=20% Similarity=0.324 Sum_probs=107.1
Q ss_pred CCCcccccCCeEEEEEEeeCCC-------------CCceeEEEEC--Cee---e--cCC----------CceEEEE----
Q psy11132 16 NPERTLNVGERASLICSITKGD-------------IPLTIKWLKD--GRY---L--DNS----------AALSITH---- 61 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~-------------~~~~v~W~~~--~~~---~--~~~----------~~~~~~~---- 61 (243)
+..+.+.+|++++|.|..+... ....+.||+. |+. + ..+ .+..+..
T Consensus 165 ~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~~ 244 (401)
T 3f8u_B 165 TPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDD 244 (401)
T ss_dssp CSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESCC
T ss_pred CCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeeccc
Confidence 4456788999999999986322 1357999963 321 1 011 1111211
Q ss_pred ----eeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCC-cEEEEEEeecCCCC-
Q psy11132 62 ----VDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGA-RTRVICGVTHGDPP- 135 (243)
Q Consensus 62 ----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~~p~- 135 (243)
...++.+|+|.+++.+|.|.|.|.+.+..+.....+.|.|..+|.+...+.....+..|+ .+.|.|.+.+.+|.
T Consensus 245 ~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~ 324 (401)
T 3f8u_B 245 EPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSG 324 (401)
T ss_dssp CSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSST
T ss_pred ccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCCC
Confidence 123478999999999999999999998777667778889988887765433312235676 79999999766776
Q ss_pred -CEEEEE-eCCE---ecCCCC----CeeEEeeccc---eeEEEEeecCC-CCCeeEEEEEEccC
Q psy11132 136 -LTIRWL-KDGK---PLSPRF----PVNVSDLDSF---SSLLSINSVSA-AHSGEYTCVASNTA 186 (243)
Q Consensus 136 -~~~~W~-~~~~---~~~~~~----~~~~~~~~~~---~~~l~i~~~~~-~d~g~y~C~~~n~~ 186 (243)
+.++|+ +++. .+.... .......++. .+.|.+..... ++.+.|+|.+.|..
T Consensus 325 ~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 325 GLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp TCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred CcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 799995 7752 111110 0001111111 23455544332 24459999999976
No 278
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=3.5e-16 Score=96.87 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=71.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+.................|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 15 ~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 93 (99)
T 1g1c_A 15 QTVGQGSDAHFRVRV-VGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAF 93 (99)
T ss_dssp EEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEcCCCcEEEEEEE-EEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEE
Confidence 456789999999999 5889999999999999987666554444445678999999999999999999999999988888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 94 l~V~ 97 (99)
T 1g1c_A 94 LLVQ 97 (99)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8886
No 279
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.67 E-value=2.6e-15 Score=103.31 Aligned_cols=168 Identities=13% Similarity=0.025 Sum_probs=109.2
Q ss_pred CccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCC
Q psy11132 11 KLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMV 90 (243)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 90 (243)
.+...++...+.+|+++.|+|.+. ...+..+.|...-.. .....+.....+.|.+++ +|.+.|.|.+....
T Consensus 4 ~v~v~P~~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~-------~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~ 74 (196)
T 3bn3_B 4 WADLQPRVAFVERGGSLWLNCSTN-CPRPERGGLETSLRR-------NGTQRGLRWLARQLVDIR-EPETQPVCFFRCAR 74 (196)
T ss_dssp CEEEESSEEEEETTEEEEEEEEEC-CSSCSEEEEECSSEE-------EEEEEETTEEEEEEEEEC-SSEECCEEEEEETT
T ss_pred EEEEcCCCcEEcCCCeEEEEEeCC-CCCCCccEEEEccCC-------eeEccccCceEEEEEEEc-cCCCceEEEEECCC
Confidence 344556667799999999999984 333336777532110 001111112348889998 88888999987655
Q ss_pred CcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCE--EEEEeCCEecCCCCCeeEE-eeccceeEEEE
Q psy11132 91 AEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT--IRWLKDGKPLSPRFPVNVS-DLDSFSSLLSI 167 (243)
Q Consensus 91 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~--~~W~~~~~~~~~~~~~~~~-~~~~~~~~l~i 167 (243)
......+.|.|..+|...........+.+|+.++|.|.+.++.|... +.|++++..+......... ........+.+
T Consensus 75 ~~~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~ 154 (196)
T 3bn3_B 75 RTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATV 154 (196)
T ss_dssp EEEEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEE
T ss_pred CceEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEE
Confidence 56778889999988876655444344789999999999976677654 7999999877532100000 00011245666
Q ss_pred eecCCCCCeeEEEEEEccCc
Q psy11132 168 NSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 168 ~~~~~~d~g~y~C~~~n~~g 187 (243)
.....++...|+|.|.+..+
T Consensus 155 ~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 155 LARREDHGANFSCRAELDLR 174 (196)
T ss_dssp ECCGGGTTCEEEEEEEEECG
T ss_pred eeeeccCCCeEEEEEEccCC
Confidence 54444444499999999876
No 280
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.67 E-value=7.2e-16 Score=93.99 Aligned_cols=89 Identities=17% Similarity=0.177 Sum_probs=71.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+.+..+.+|+.+.|.|.+. + +++.+.|+|+|..+....++.+.... ....|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~-~-~~~~v~W~k~g~~i~~~~~~~i~~~g-~~~~L~I~~v~~~D~G~Y~C~a~ 80 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELS-E-PDVHGQWKLKGQPLAASPDCEIIEDG-KKHILILHNCQLGMTGEVSFQAA 80 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEES-S-SSCCCEEEETTEECCCBTTEEEEEET-TEEEEEECSCCGGGCEEEEEEET
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEEC-C-CCCeEEEEECCEECcCCCCEEEEEEC-CEEEEEECCCChhhCEEEEEEEC
Confidence 467888888889999999999999995 4 44689999999999887777655432 24689999999999999999997
Q ss_pred eCCCcceeEEEEEEEc
Q psy11132 88 NMVAEDTQVQRLIVNV 103 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~ 103 (243)
|. ..+..|.|.+
T Consensus 81 n~----~~sa~L~V~~ 92 (93)
T 1waa_A 81 NT----KSAANLKVKE 92 (93)
T ss_dssp TE----EEEEEEEEEC
T ss_pred CC----cEEEEEEEEc
Confidence 63 3456666654
No 281
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=97.78 Aligned_cols=97 Identities=24% Similarity=0.307 Sum_probs=80.1
Q ss_pred ecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC-CCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 7 TVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN-SAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 7 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++.... ...|.|.+++.+|+|.|+|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~-g~p~p~i~W~k~g~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVAT-GSPVPTILWRKDGVLVSTQDSRIKQLE----NGVLQIRYAKLGDTGRYTCI 80 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCC-CSSCCEEEEEESSSBCCTTSTTEEEEE----TTEEEEESCCGGGCCCEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEE-ecCCCEEEEEECCEECcCCCCeEEEcc----CCEEEEccCCcCCCEEEEEE
Confidence 3578888888888999999999999994 788889999999988864 33443322 45899999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCCCcc
Q psy11132 86 VRNMVAEDTQVQRLIVNVPPKIE 108 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p~~~ 108 (243)
+.|..+.....+.|.|..++.+.
T Consensus 81 a~n~~g~~~~~~~l~V~~~~~p~ 103 (118)
T 2eo9_A 81 ASTPSGEATWSAYIEVQEFGVPV 103 (118)
T ss_dssp EECSSCEEEEECCEEEECCSCCC
T ss_pred EEcCCCcEEEEEEEEEEeCCCCc
Confidence 99999988888888988776543
No 282
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-15 Score=97.02 Aligned_cols=95 Identities=19% Similarity=0.287 Sum_probs=74.4
Q ss_pred CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC-CCeeEEeeccceeEEEEeecCCCCCeeEEEEE
Q psy11132 104 PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVA 182 (243)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 182 (243)
+|.+...+.. ..+.+|+.+.|.|.+ .|.|.+.+.|++++..+... ..............|.|.+++.+|+|.|+|.|
T Consensus 15 ~p~f~~~p~~-~~v~~G~~v~L~C~~-~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 15 APMFIYKPQS-KKVLEGDSVKLECQI-SAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CCCBSSCCCC-EEEETTEEEEEEEEB-CCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCeEEeCCCc-EEEeCCCcEEEEEEE-eccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4555443333 567899999999999 68999999999999988753 33433333333458999999999999999999
Q ss_pred EccCcceeeeEEEEEEee
Q psy11132 183 SNTAAQARYSSKLQVKGN 200 (243)
Q Consensus 183 ~n~~g~~~~~~~l~v~~~ 200 (243)
.|..|.....+.|.|...
T Consensus 93 ~N~~G~~~~~~~l~V~~~ 110 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTAR 110 (116)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EcCCCeEEEEEEEEEeCC
Confidence 999999988999998843
No 283
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.66 E-value=2.8e-16 Score=97.48 Aligned_cols=83 Identities=25% Similarity=0.377 Sum_probs=70.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+.................|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 15 ~~~~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2kdg_A 15 MSIDEGRFCRMDFKV-SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQ 93 (100)
T ss_dssp EEEETTCCEEEEEEC-EEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEecCCCEEEEEEEE-EeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEE
Confidence 456789999999999 5889999999999998877654444433444568999999999999999999999999988899
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 94 l~V~ 97 (100)
T 2kdg_A 94 LDVL 97 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8887
No 284
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.66 E-value=5.1e-16 Score=96.10 Aligned_cols=83 Identities=23% Similarity=0.425 Sum_probs=69.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+.................|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 15 ~~v~~G~~v~l~C~~-~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~ 93 (99)
T 1u2h_A 15 QSVREGQDVIMSIRV-QGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEAR 93 (99)
T ss_dssp EEEETTCCEEEEEEE-EEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEecCCCEEEEEEEE-EEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEE
Confidence 456789999999999 5889999999999999876655444444444568999999999999999999999999988888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 94 l~V~ 97 (99)
T 1u2h_A 94 LEVR 97 (99)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
No 285
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.66 E-value=2.3e-15 Score=95.96 Aligned_cols=94 Identities=14% Similarity=0.226 Sum_probs=74.9
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee------eeceEEEEeecCCCCCee
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD------QYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~------~~~~~l~i~~~~~~d~G~ 81 (243)
.||.+.+.. ...+..+.|.|.+ .|.|.+.|+|+|+|..+....+....... .....|.|.+++..|+|.
T Consensus 3 ~pP~I~l~~----~~~~~~~~l~c~v-~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 77 (126)
T 1he7_A 3 MPASVQLHT----AVEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGN 77 (126)
T ss_dssp CCCCCCCCC----CCCCCEEEEEEEE-CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEE
T ss_pred CCCEEEccC----CccCccEEEEEEE-eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEE
Confidence 578773322 3467899999999 59999999999999999887665433221 124679999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCC
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~ 106 (243)
|+|.|.|..|....++.|.|...|.
T Consensus 78 YtC~A~N~~G~~~~t~~l~v~~~P~ 102 (126)
T 1he7_A 78 YTLLAANPFGQASASIMAAFMDNPF 102 (126)
T ss_dssp EEEEEEETTEEEEEEEEECCCSCTT
T ss_pred EEEEEEECCCeEEEEEEEEEEcCCC
Confidence 9999999999998888888877664
No 286
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.65 E-value=1.8e-15 Score=105.00 Aligned_cols=117 Identities=21% Similarity=0.344 Sum_probs=87.6
Q ss_pred CCCCCCCcEEEEEEeecCCC-CCEEEEEe-CCEecCCC-CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccC-ccee
Q psy11132 115 DGLPEGARTRVICGVTHGDP-PLTIRWLK-DGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA-AQAR 190 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p-~~~~~W~~-~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-g~~~ 190 (243)
..+.+|+.+.|.|.+. +.+ .+.+.|++ ++..+... ..............|.|.++..+|+|.|+|.+.|.. +...
T Consensus 12 ~~v~~G~~v~l~C~~~-~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 90 (191)
T 1epf_A 12 GEISVGESKFFLCQVA-GDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (191)
T ss_dssp EEEETTCCEEEEEEEC-CCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEE
T ss_pred cEEcCCCCEEEEEECC-CCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceE
Confidence 4567899999999994 655 88999999 88777643 333333333456889999999999999999999998 4556
Q ss_pred eeEEEEEEeecCCCCCee-------eeeccceeeeccCcccc--cccceEEeCCee
Q psy11132 191 YSSKLQVKGNLNRLPPSY-------TLVFSQASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 191 ~~~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
..+.+.|. .+|.+ .+..++.+.+.|...+. +.+.|+++|..+
T Consensus 91 ~~~~l~v~-----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~ 141 (191)
T 1epf_A 91 ATVNVKIF-----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDV 141 (191)
T ss_dssp EEEEEEEE-----CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEG
T ss_pred EEEEEEee-----cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEe
Confidence 67777776 34433 44557778888976554 489999998654
No 287
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.65 E-value=1.9e-15 Score=94.12 Aligned_cols=80 Identities=15% Similarity=0.280 Sum_probs=65.8
Q ss_pred CCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeE--Eee--ccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 118 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNV--SDL--DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 118 ~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~--~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+..+.|.|.+ .|.|.|.++|+++|..+........ ... ....+.|.|.++..+|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~~~~c~v-~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 14 TSDHHWCIPFTV-KGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCCEEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eECcEEEEEEEE-EEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 468889999999 6999999999999999887654211 111 12246699999999999999999999999999999
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.|.|.
T Consensus 93 ~l~V~ 97 (103)
T 1wwb_X 93 SAHFM 97 (103)
T ss_dssp EECCS
T ss_pred EEEEC
Confidence 99887
No 288
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.65 E-value=8.8e-16 Score=94.26 Aligned_cols=87 Identities=24% Similarity=0.367 Sum_probs=73.0
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+. +.| +.+.|++++..+....++... ...|.|.+++.+|+|.|+|.+.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~-g~p-p~i~W~k~g~~~~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~C~a~ 80 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLR-DDV-QSINWLRDGVQLVESNRTRIT-----GEEVEVRDSIPADSGLYACVTS 80 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEE-SSC-CEEEEEBTTBCCCCCSSEEEC-----SSEEEESSCCGGGSEEEEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECC-CCC-CceEEEECCEecCCCCCEEEe-----CCEEEECCCChHHCEEEEEEec
Confidence 467777777888899999999999996 556 699999999988776665433 5689999999999999999999
Q ss_pred eCCCcceeEEEEEE
Q psy11132 88 NMVAEDTQVQRLIV 101 (243)
Q Consensus 88 ~~~~~~~~~~~l~v 101 (243)
|..|.....+.|.|
T Consensus 81 n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 81 SPSGSDTTYFSVNV 94 (95)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEE
Confidence 99888777777765
No 289
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.65 E-value=5.3e-15 Score=91.13 Aligned_cols=89 Identities=24% Similarity=0.337 Sum_probs=73.2
Q ss_pred cCCCCCcccccCCeEEEEEEeeCCC-CCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCC
Q psy11132 13 SPTNPERTLNVGERASLICSITKGD-IPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVA 91 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 91 (243)
...+....+.+|+.+.|.|.+. +. |.+.+.|++++..+....++.+... .....|.|.+++.+|+|.|+|.+.|..+
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~-g~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIE-NYDQSTQVTWYFGVRQLENSEKYEITYE-DGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEE-SCCTTCEEEEEETTEECCSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eccCcCEEEcCCCcEEEEEEEe-ccCCCCEEEEEECCEECcCCCCEEEEEc-CCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 3445677899999999999996 64 8889999999999887777665432 2246899999999999999999999999
Q ss_pred cceeEEEEEEEc
Q psy11132 92 EDTQVQRLIVNV 103 (243)
Q Consensus 92 ~~~~~~~l~v~~ 103 (243)
.....+.|.|..
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 888888887754
No 290
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=2.8e-15 Score=95.26 Aligned_cols=84 Identities=23% Similarity=0.343 Sum_probs=71.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+.....+.... ......|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 17 ~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 94 (114)
T 2cqv_A 17 QKVRAGESVELFGKV-TGTQPITCTWMKFRKQIQESEHMKVEN-SENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVN 94 (114)
T ss_dssp EEEETTCCEEEEEEE-ESSSSCEEEEEESSSBCCCSSSEEEEE-CSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEE
T ss_pred eEEeCCCeEEEEEEE-EcCCCCEEEEEECCEECcCCCCEEEEE-cCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEE
Confidence 557789999999999 589999999999999887665554432 233678999999999999999999999999888999
Q ss_pred EEEEee
Q psy11132 195 LQVKGN 200 (243)
Q Consensus 195 l~v~~~ 200 (243)
|.|.+.
T Consensus 95 l~V~~~ 100 (114)
T 2cqv_A 95 LTVVDK 100 (114)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 998843
No 291
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.65 E-value=2.9e-16 Score=98.43 Aligned_cols=93 Identities=29% Similarity=0.468 Sum_probs=78.8
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~-g~p~p~v~W~k~g~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTD-GEPVPTVTWLRKGQVLSTSARHQVTTTK-YKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEE-CSSCCBCCBCSSSSCCTTCSSEEEEECS-SEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEE-EcCCCEEEEEECCEECCCCCCEEEEECC-CEEEEEECcCCchhCEEEEEEEE
Confidence 567787788888999999999999995 7888899999999988776666655422 35789999999999999999999
Q ss_pred eCCCcceeEEEEEEE
Q psy11132 88 NMVAEDTQVQRLIVN 102 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~ 102 (243)
|..|..+..+.|.|.
T Consensus 91 N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSSCBCCEEEEEEEC
T ss_pred eCCCeEEEEEEEEEE
Confidence 999988888888774
No 292
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.64 E-value=7.6e-16 Score=107.19 Aligned_cols=121 Identities=22% Similarity=0.286 Sum_probs=90.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC--CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF--PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ..... .......|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 15 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 92 (194)
T 2a38_A 15 VVVLEGSTATFEAHI-SGFPVPEVSWFRDGQVISTSTLPGVQIS-FSDGRAKLTIPAVTKANSGRYSLKATNGSGQATST 92 (194)
T ss_dssp EEEETTSCEEEEEEE-EEESCCEEEEEESSSBCCTTTSTTCEEE-EETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eEEECCCEEEEEEEE-EecCCCEEEEEECCEEcccccCCceEEE-eCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEE
Confidence 456789999999999 588889999999998887553 22222 23345789999999999999999999999988777
Q ss_pred EEEEEEeec-----CCCCCeeeeeccceeeeccCcccc--cccceEEeCCee
Q psy11132 193 SKLQVKGNL-----NRLPPSYTLVFSQASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 193 ~~l~v~~~~-----~~~~p~~~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
+.+.|.... ...+....+..+..+.+.|..... +.+.|+++|..+
T Consensus 93 ~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~ 144 (194)
T 2a38_A 93 AELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEI 144 (194)
T ss_dssp EEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEEC
T ss_pred EEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEEC
Confidence 777776311 011223345567788889987654 489999998654
No 293
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.64 E-value=2e-15 Score=89.99 Aligned_cols=81 Identities=19% Similarity=0.421 Sum_probs=64.9
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeE
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQV 96 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 96 (243)
.++.+.+|+++.|.|.+. + |.+.+.|+|+|..+....++.+...+ ....|.|.+++.+|+|.|+|.|. ..+..
T Consensus 4 t~v~~~~G~~v~l~C~vs-~-p~p~v~W~k~g~~l~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~----n~~~~ 76 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLS-G-PGGPVRWYKDGERLASQGRVQLEQAG-ARQVLRVQGARSGDAGEYLCDAP----QDSRI 76 (84)
T ss_dssp CCEEECTTSCEEEECCCS-C-CSTTCEEEETTEECCCCSSEEEEECS-SCEEEEESSCSSTTCEEEEEECT----TTCEE
T ss_pred eEEEEecCCCEEEEEEEC-C-CCcEEEEEECCEEccccccEEEeecC-CeEEEEecCCCCcccEEEEEEEC----CEEEE
Confidence 356788999999999983 5 77789999999999888777665433 35789999999999999999874 34566
Q ss_pred EEEEEEcC
Q psy11132 97 QRLIVNVP 104 (243)
Q Consensus 97 ~~l~v~~~ 104 (243)
+.|.|.+|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 77777643
No 294
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.64 E-value=1.5e-15 Score=94.16 Aligned_cols=93 Identities=19% Similarity=0.444 Sum_probs=75.7
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecC--CCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDN--SAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++.+... .....|.|.+++.+|+|.|+|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~ 81 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFT-GEPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEE-EESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEE-EcCCCceEEEECCEEeecCCCCEEEEEec-CCEEEEEEeecCcccCEEEEEE
Confidence 467777777788899999999999995 778889999999998863 334444332 2247899999999999999999
Q ss_pred EEeCCCcceeEEEEEEE
Q psy11132 86 VRNMVAEDTQVQRLIVN 102 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~ 102 (243)
+.|..+.....+.|.|.
T Consensus 82 a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 82 LGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEEE
Confidence 99999988888888775
No 295
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=2.3e-16 Score=97.68 Aligned_cols=91 Identities=21% Similarity=0.354 Sum_probs=74.3
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
+..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....... ......|.|.+++.+|+|.|+|.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVR-GTPVPRITWLLNGQPIQYARSTC----EAGVAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEE-EESCCCCEEEESSSBCSSCCCEE----ETTEEEEEECSCCTTCCBCEEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEe-eeCCCeEEEEECCEECcccceEe----eCCeEEEEECCCChhhCEEEEEE
Confidence 45678888778888899999999999995 77888999999998876543321 12257899999999999999999
Q ss_pred EEeCCCcceeEEEEEE
Q psy11132 86 VRNMVAEDTQVQRLIV 101 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v 101 (243)
+.|..+.....+.|.|
T Consensus 83 a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 83 AENALGQVSCSAWVTV 98 (99)
T ss_dssp EECSSCEEEEECCEEE
T ss_pred EEECCCeEEEEEEEEE
Confidence 9999998777766665
No 296
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.64 E-value=6.1e-15 Score=93.97 Aligned_cols=81 Identities=25% Similarity=0.287 Sum_probs=67.3
Q ss_pred CCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeec------cceeEEEEeecCCCCCeeEEEEEEccCcceee
Q psy11132 118 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD------SFSSLLSINSVSAAHSGEYTCVASNTAAQARY 191 (243)
Q Consensus 118 ~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~------~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~ 191 (243)
..+..+.|.|.+ .|.|.|.++|+++|..+............ ...+.|.|.++...|+|.|+|.|.|..|....
T Consensus 13 ~~~~~~~l~c~v-~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 13 VEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCEEEEEEEE-CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred ccCccEEEEEEE-eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 467889999999 79999999999999999876654322111 13578999999999999999999999999998
Q ss_pred eEEEEEEe
Q psy11132 192 SSKLQVKG 199 (243)
Q Consensus 192 ~~~l~v~~ 199 (243)
++.+.|.+
T Consensus 92 t~~l~v~~ 99 (126)
T 1he7_A 92 SIMAAFMD 99 (126)
T ss_dssp EEEECCCS
T ss_pred EEEEEEEc
Confidence 88888874
No 297
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.64 E-value=2.4e-16 Score=110.48 Aligned_cols=117 Identities=14% Similarity=0.181 Sum_probs=82.5
Q ss_pred CCCCCCCcEEEEEEee--cCCCCCEEEEEeCCEecCCC----------------CCeeEEeeccceeEEEEeecCCCCCe
Q psy11132 115 DGLPEGARTRVICGVT--HGDPPLTIRWLKDGKPLSPR----------------FPVNVSDLDSFSSLLSINSVSAAHSG 176 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~--~~~p~~~~~W~~~~~~~~~~----------------~~~~~~~~~~~~~~l~i~~~~~~d~g 176 (243)
..+..|+.+.|.|... .+.|.+.++|+|+|...... ..............|.|.+++.+|+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 3456899999999531 57789999999976432210 00011112233577999999999999
Q ss_pred eEEEEEEccCcceeeeEEEEEEeecCCCCCeeee-------eccceeeeccCccccc--ccceEEeCCe
Q psy11132 177 EYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYSFE--QDSWMIDNEN 236 (243)
Q Consensus 177 ~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~~--~~~W~~~~~~ 236 (243)
.|+|.|.|..|.....+.|.|. .||.+.. ..+..+.+.|...+.| .++|++++..
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~-----~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~ 146 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVV-----KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGV 146 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE-----EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC---
T ss_pred EEEEEEEcCCCcEEEEEEEEec-----CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCee
Confidence 9999999999999888999888 4555433 3466778888776654 8999887643
No 298
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.64 E-value=7.6e-15 Score=121.96 Aligned_cols=185 Identities=12% Similarity=0.133 Sum_probs=117.0
Q ss_pred cCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeec-CCCCCeeEEEEEEeCCCccee-EEEEE
Q psy11132 23 VGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSV-SARHSGNYSCTVRNMVAEDTQ-VQRLI 100 (243)
Q Consensus 23 ~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~~-~~~l~ 100 (243)
.+..+.|.|.+ .+.|.+.+.|.++|..+.... ...+.|..+ ....++.|.|.+.+..|.... .+.+.
T Consensus 90 ~~g~l~v~c~~-~g~P~p~i~W~k~g~~~~~~~----------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~ 158 (731)
T 2v5y_A 90 PPGLLNVYVKV-NNGPLGNPIWNISGDPTRTWN----------RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVL 158 (731)
T ss_dssp CSEEEEEEEEE-TTCCCCSEEEEECCCCCSSCE----------EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEE
T ss_pred CcceEEEEEec-CCCCccceeEEEeCCcCCcee----------EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEee
Confidence 34589999998 488888999999997764321 223444433 222236777766555553221 11121
Q ss_pred EE---cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEE-EE--eCCEecCCCCCeeEEeeccceeEEEEeecCCCC
Q psy11132 101 VN---VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIR-WL--KDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAH 174 (243)
Q Consensus 101 v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~-W~--~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 174 (243)
.. .+|.+. ......+..|+++.|.|.+ .|.|.+.+. |+ ++|..+.... ..........+.|.|.++...|
T Consensus 159 ~~~~~~~p~~~--~~~~~~v~~G~~v~l~C~~-~g~P~p~i~~W~~~~~g~~l~~~~-~~~~~~~~~~~~l~I~~~~~~d 234 (731)
T 2v5y_A 159 GHPCTRTPHFL--RIQNVEVNAGQFATFQCSA-IGRTVAGDRLWLQGIDVRDAPLKE-IKVTSSRRFIASFNVVNTTKRD 234 (731)
T ss_dssp SSCCSSSCEEC--CCCCEEEETTSCEEEEEEE-ESCCCTTCEEEEEESSSCCEEEEE-EEECCSSEEEEEEEECSCCTTT
T ss_pred ecccccccccc--cccceEEeCCCcEEEEEEe-CCCCCCceeEEEecCCCccccccc-eEEeccccceEEEEEccccccc
Confidence 11 234333 1223567789999999999 699988887 77 6666554221 1111112234789999999999
Q ss_pred CeeEEEEEEccCcc-eeeeEEEEEEeecC-CCCCeeeeeccceeeeccCc
Q psy11132 175 SGEYTCVASNTAAQ-ARYSSKLQVKGNLN-RLPPSYTLVFSQASYMSTSY 222 (243)
Q Consensus 175 ~g~y~C~~~n~~g~-~~~~~~l~v~~~~~-~~~p~~~~~~~~~~~~~~~~ 222 (243)
.|.|+|.|.|..|. ....+.|.|...+. ..+|.+.......+.+.|..
T Consensus 235 ~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~ 284 (731)
T 2v5y_A 235 AGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNA 284 (731)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCC
T ss_pred CeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCC
Confidence 99999999999997 66777888875432 23455554455566666654
No 299
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=7.3e-15 Score=93.69 Aligned_cols=96 Identities=23% Similarity=0.253 Sum_probs=73.3
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCC--CCCceeEEEECCee-ec--CCCceEEEEee-----eeceEEEEeecCCCCC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKG--DIPLTIKWLKDGRY-LD--NSAALSITHVD-----QYNSMLVIDSVSARHS 79 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~v~W~~~~~~-~~--~~~~~~~~~~~-----~~~~~l~i~~~~~~d~ 79 (243)
|.|...+..+.+.+|++++|.|.+.+. .|.+.|+|||+... +. ...++.+.... .....|+|.+++..|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 456777888899999999999998632 37889999997421 11 12344433211 1257899999999999
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEc-CC
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNV-PP 105 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~-~p 105 (243)
|.|+|++.|..+..+..+.|.|.. ++
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~~~~ 114 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHESTG 114 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEECCCC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEecCC
Confidence 999999999999899999999998 44
No 300
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=4.3e-15 Score=94.98 Aligned_cols=101 Identities=17% Similarity=0.300 Sum_probs=76.9
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEee---eeceEEEEeecCCCC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVD---QYNSMLVIDSVSARH 78 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d 78 (243)
+.|.|..||.+....... ..+...|.|.+. |.|.+.+.|+++|..+....+....... ...+.|.|.+++.+|
T Consensus 1 v~L~V~~pP~i~~~~~~~---~~~~~~l~C~~~-g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 76 (118)
T 1wwc_A 1 VALTVYYPPRVVSLEEPE---LRLEHCIEFVVR-GNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYN 76 (118)
T ss_dssp ---CCCCCCCCCCCCCCC---CCCEEEEEEEEE-CSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGG
T ss_pred CEEEEecCCceeccCCCe---eccceEEEEEee-eeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhc
Confidence 467888999987653322 236778999995 7888999999999999876655443322 135689999999999
Q ss_pred CeeEEEEEEeCCCcceeEEEEEEEcCCC
Q psy11132 79 SGNYSCTVRNMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~~~~~~~l~v~~~p~ 106 (243)
+|.|+|.|.|..|.....+.|.|...|.
T Consensus 77 ~G~Y~C~a~N~~G~~~~~~~l~v~~~P~ 104 (118)
T 1wwc_A 77 NGNYTLIAKNPLGTANQTINGHFLKEPF 104 (118)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCSCCCC
T ss_pred CEEEEEEEECCCCeEeeEEEEEEccCCC
Confidence 9999999999999988888887776553
No 301
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.63 E-value=5e-16 Score=96.87 Aligned_cols=83 Identities=27% Similarity=0.432 Sum_probs=70.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .|.|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 18 ~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 95 (103)
T 3qp3_A 18 HRVPCGQNTRFILNV-QSKPTAEVKWYHNGVELQESSKIHYTN-TSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYAT 95 (103)
T ss_dssp EEEETTCCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCeEEEEEEE-EecCCCEEEEEECCEECCCCCCEEEEE-CCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEE
Confidence 456789999999999 589999999999999988766554432 334568999999999999999999999999998999
Q ss_pred EEEEe
Q psy11132 195 LQVKG 199 (243)
Q Consensus 195 l~v~~ 199 (243)
|.|.+
T Consensus 96 l~V~~ 100 (103)
T 3qp3_A 96 LDVTG 100 (103)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98873
No 302
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.7e-15 Score=94.51 Aligned_cols=92 Identities=18% Similarity=0.255 Sum_probs=73.2
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCC-CceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDI-PLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
||.+...+.+..+.+|+.++|.|.+. +.+ ++.+.|+|+|..+....++.+.... ...+|.|.+++.+|+|.|+|.+.
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~-~~~~~~~v~W~k~g~~i~~~~r~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLS-HESASDPAMWTVGGKTVGSSSRFQATRQG-RKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECS-SCCCSSCBCCBSSSSBCSBCSSCEEEEET-TEEEEEECSCCTTTCSCEEEEET
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEc-CCCCCceeEEEECCEECCCCCCEEEEEcC-CEEEEEECCCCHHHCEEEEEEEC
Confidence 45777778888999999999999995 544 4579999999999877776655432 25689999999999999999884
Q ss_pred eCCCcceeEEEEEEEcCCC
Q psy11132 88 NMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~ 106 (243)
.....+.|.|..+|.
T Consensus 86 ----~~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 86 ----GLTSKASLIVRERSG 100 (104)
T ss_dssp ----TEEEEECEEEECCCS
T ss_pred ----CeeEEEEEEEeCCCc
Confidence 345677888887764
No 303
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.63 E-value=2.7e-15 Score=105.59 Aligned_cols=121 Identities=10% Similarity=0.115 Sum_probs=86.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeec-cceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD-SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+..+.|.+.+.|+++|..+.....+.+.... .....|.|.++..+|+|.|+|.|.| |......
T Consensus 12 ~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~ 89 (207)
T 3rbs_A 12 VEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHS 89 (207)
T ss_dssp EEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEE
T ss_pred eEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEE
Confidence 457789999999999656899999999999999876655544322 2345799999999999999999999 4444333
Q ss_pred EEEEEeec----------------CCCCCe------eeeeccceeeeccCcccc---cccceEEeCCee
Q psy11132 194 KLQVKGNL----------------NRLPPS------YTLVFSQASYMSTSYYSF---EQDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~----------------~~~~p~------~~~~~~~~~~~~~~~~~~---~~~~W~~~~~~~ 237 (243)
.+.+.... ...+|. ..+..+..+.+.|..... +.++|++||..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 90 TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp EEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred EEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 33221000 002443 345567888899986654 589999998766
No 304
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.63 E-value=7.2e-16 Score=103.37 Aligned_cols=83 Identities=27% Similarity=0.456 Sum_probs=71.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+.....+...........|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 51 ~~v~~G~~v~L~C~~-~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 129 (154)
T 1fhg_A 51 MEVVEGSAARFDCKV-EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAE 129 (154)
T ss_dssp EEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCeEEEEEEE-EEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEE
Confidence 456789999999999 5889999999999999887665555433344578999999999999999999999999988999
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 130 l~V~ 133 (154)
T 1fhg_A 130 LLVE 133 (154)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 305
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3.8e-15 Score=94.01 Aligned_cols=84 Identities=26% Similarity=0.430 Sum_probs=69.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC-CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..+...........|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 18 ~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 96 (110)
T 2dm2_A 18 YKIFEGMPVTFTCRV-AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTG 96 (110)
T ss_dssp EEEETTCCEEEEEEB-CCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECC
T ss_pred eEEeCCCeEEEEEEE-EecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEE
Confidence 457789999999999 68999999999999988753 3333333333346899999999999999999999999998888
Q ss_pred EEEEEe
Q psy11132 194 KLQVKG 199 (243)
Q Consensus 194 ~l~v~~ 199 (243)
.|.|..
T Consensus 97 ~l~V~~ 102 (110)
T 2dm2_A 97 RLMVQA 102 (110)
T ss_dssp CEEEEC
T ss_pred EEEEEC
Confidence 898884
No 306
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.62 E-value=1.3e-14 Score=91.26 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=71.4
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCC---ceeEEEECCeeecC---CCceEEEEee-----eeceEEEEeecCCC
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIP---LTIKWLKDGRYLDN---SAALSITHVD-----QYNSMLVIDSVSAR 77 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~---~~v~W~~~~~~~~~---~~~~~~~~~~-----~~~~~l~i~~~~~~ 77 (243)
.|.+...+....+.+|++++|.|.+. +.|. +.+.|+|++..... ..++.+.... .....|.|.+++.+
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~-g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVA-GASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEE-CC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEEC-CCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 46777778888899999999999996 7776 89999998732211 2233332211 12568999999999
Q ss_pred CCeeEEEEEEeCCCcceeEEEEEEE
Q psy11132 78 HSGNYSCTVRNMVAEDTQVQRLIVN 102 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~~~~~l~v~ 102 (243)
|+|.|+|.+.|..|..+..+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999998888888875
No 307
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=7.3e-15 Score=91.53 Aligned_cols=91 Identities=19% Similarity=0.336 Sum_probs=71.9
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC--ceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA--ALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
|+.+...+....+.+|++++|.|.+. + +.+.+.|+|++..+.... ++.+.... ....|.|.+++.+|+|.|+|.+
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~-~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a 83 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVS-E-DDANVKWFKNGEEIIPGPKSRYRIRVEG-KKHILIIEGATKADAAEYSVMT 83 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECS-S-SSCCCEEEETTEECCCSTTCSEEEEEET-TEEEEEEEEECTTTCSEEEEEE
T ss_pred CceeeccCCCEEEECCCCEEEEEEec-C-CCCeEEEEECCEECCCCCceEEEEEEcC-CEEEEEECCCCcccCEEEEEEE
Confidence 34477777788899999999999994 5 557999999999988766 44544322 2478999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCCC
Q psy11132 87 RNMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p~ 106 (243)
.| .+..+.|.|..+|.
T Consensus 84 ~n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 84 TG----GQSSAKLSVDLKSG 99 (103)
T ss_dssp TT----EEEEEEEEEECCCS
T ss_pred CC----CcEEEEEEEeCCCC
Confidence 76 46667788877664
No 308
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.62 E-value=6.4e-15 Score=105.14 Aligned_cols=168 Identities=18% Similarity=0.232 Sum_probs=98.6
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCC--CceeEEEECC--ee---ec---------CCCceEEEEe-eeeceEEEEeecCC
Q psy11132 14 PTNPERTLNVGERASLICSITKGDI--PLTIKWLKDG--RY---LD---------NSAALSITHV-DQYNSMLVIDSVSA 76 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~--~~~v~W~~~~--~~---~~---------~~~~~~~~~~-~~~~~~l~i~~~~~ 76 (243)
..+..+.+.+|++++|.|.+. +.+ ...+.|+|.. .. +. ...++.+... .....+|.|.+++.
T Consensus 6 q~p~~v~v~~G~~vtL~C~~s-~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 84 (229)
T 1hxm_A 6 PEHQTVPVSIGVPATLRCSMK-GEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSE 84 (229)
T ss_dssp ESCSEEEEETTCCEEEEEEEC-SSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCG
T ss_pred eCCCEEEEcCCCCEEEEeEec-CCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCH
Confidence 345567789999999999985 333 3579999842 21 10 1244544432 23356899999999
Q ss_pred CCCeeEEEEEEeCCC------c--ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEec
Q psy11132 77 RHSGNYSCTVRNMVA------E--DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPL 147 (243)
Q Consensus 77 ~d~G~Y~C~~~~~~~------~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~ 147 (243)
+|+|.|.|.+.+... . ......|.|.........+ . ..+.. ....|.|.+.+.+|. +.+.|+++ ..+
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P-~-v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~ 160 (229)
T 1hxm_A 85 RDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKP-S-VFVMK-NGTNVACLVKEFYPKDIRINLVSS-KKI 160 (229)
T ss_dssp GGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCC-E-EEEEE-ETTEEEEEEESCBSSCCEEEEECS-SEE
T ss_pred hHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCC-c-EEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CEE
Confidence 999999999987531 1 1123467776421111000 0 11111 124899999655565 49999998 655
Q ss_pred CCCCCeeEEeeccceeEEEEeec-CCCCCeeEEEEEEccCcce
Q psy11132 148 SPRFPVNVSDLDSFSSLLSINSV-SAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n~~g~~ 189 (243)
...........+ +.+.+... ..++.|.|+|.+.+..+..
T Consensus 161 ~~~~~~~~~~~d---g~y~~~~~~~~~~~~~ytC~V~h~~~~~ 200 (229)
T 1hxm_A 161 TEFDPAIVISPS---GKYNAVKLGKYEDSNSVTCSVQHDNKTV 200 (229)
T ss_dssp EECCCEEEECTT---SSEEEEEEEEETTTTTCEEEEEETTEEE
T ss_pred ecCccceEECCC---CcEEEEECcccCCCCcEEEEEEeCCCCc
Confidence 433222111111 22222222 2367899999999987544
No 309
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.62 E-value=4.3e-15 Score=93.38 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=73.1
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCe-eec-------CCCceEEEEeeeeceEEEEeecCCC
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGR-YLD-------NSAALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~-~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
+..+|.+...+....+.+|++++|.|.+. +.+.+.+.|++++. .+. ...++..........+|.|.+++.+
T Consensus 3 v~~~p~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 81 (108)
T 3m45_A 3 VKGSQGQFPLTQNVTVVEGGTAILTCRVD-QNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLS 81 (108)
T ss_dssp -----CCCEECCCEEEETTSCEEEEEEES-SCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGG
T ss_pred cccCCCccccCCeeEEEeCCcEEEEeEEc-CCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChh
Confidence 44567777778889999999999999995 66778999999775 221 2234444433334678999999999
Q ss_pred CCeeEEEEEEeCCCcceeEEEEEEEcCC
Q psy11132 78 HSGNYSCTVRNMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~~~~~l~v~~~p 105 (243)
|+|.|+|.+.+ .+..+..+.|.|..+|
T Consensus 82 D~G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 82 DEGQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp GCEEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred HCeEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999999 7777888888887665
No 310
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.62 E-value=3.5e-15 Score=103.61 Aligned_cols=117 Identities=17% Similarity=0.245 Sum_probs=88.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+......... .....|.|.+++.+|+|.|+|.+.|..|.....+.
T Consensus 14 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 89 (192)
T 2va4_A 14 ATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEENEKYILK---GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAF 89 (192)
T ss_dssp EETTSCCCEEEECEE-ECSSCCEEEEEETTEECCCSSSEEEE---TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCCEEEEEee-ccCCCCeEEEEECCeEcCCCccEEEe---CCeeEEEEecCChhcCcEEEEEEEccccccceEEE
Confidence 457789999999999 58899999999999998876544332 22467999999999999999999999988888888
Q ss_pred EEEEeecCC-CCCeeeeeccceeeeccCccccc--ccceEEeCC
Q psy11132 195 LQVKGNLNR-LPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNE 235 (243)
Q Consensus 195 l~v~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~ 235 (243)
|.|...+.. .++...+..+..+.+.|.....+ .+.|+++++
T Consensus 90 l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~ 133 (192)
T 2va4_A 90 LQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVD 133 (192)
T ss_dssp EEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTT
T ss_pred EEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCC
Confidence 887632210 11222344577788889775544 899999843
No 311
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.62 E-value=1.5e-15 Score=92.82 Aligned_cols=79 Identities=22% Similarity=0.274 Sum_probs=65.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--EecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
..+..|+.+.|.|.+ .|.|.|.+.|++++ ..+...... ......+.|.|.++..+|+|.|+|.|.|..|....+
T Consensus 12 ~~v~~G~~~~l~C~~-~g~P~p~i~W~k~~~~~~~~~~~~~---~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~ 87 (93)
T 1wit_A 12 IKIKAGFTHNLEVDF-IGAPDPTATWTVGDSGAALAPELLV---DAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAI 87 (93)
T ss_dssp EEECTTBCCEEEEEE-ECCSSCEEEEECSTTTCBCSTTSEE---EEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEE
T ss_pred eEEeCCCEEEEEEEE-EEcCCCEEEEEECCCCcccCCcEEE---EecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEE
Confidence 557889999999999 59999999999999 777654221 122345789999999999999999999999988888
Q ss_pred EEEEE
Q psy11132 193 SKLQV 197 (243)
Q Consensus 193 ~~l~v 197 (243)
+.|.|
T Consensus 88 ~~l~V 92 (93)
T 1wit_A 88 FEVIV 92 (93)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88776
No 312
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.62 E-value=3.8e-15 Score=108.98 Aligned_cols=175 Identities=15% Similarity=0.289 Sum_probs=104.4
Q ss_pred CCcccccCCeEEEEEEeeCC-CCCceeEEEECC--ee---e---c-----------CCCceEEEEee-eeceEEEEeecC
Q psy11132 17 PERTLNVGERASLICSITKG-DIPLTIKWLKDG--RY---L---D-----------NSAALSITHVD-QYNSMLVIDSVS 75 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~--~~---~---~-----------~~~~~~~~~~~-~~~~~l~i~~~~ 75 (243)
....+.+|++++|.|.+... .....+.|++.. .. + . ...++.+.... ....+|+|.+++
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 34678999999999998531 234689999832 11 1 0 01344433322 235689999999
Q ss_pred CCCCeeEEEEEEe-------CC------------C------cceeEEEEEEEc----CCCccccccCCCCCCCCCcEEEE
Q psy11132 76 ARHSGNYSCTVRN-------MV------------A------EDTQVQRLIVNV----PPKIESFAFPFDGLPEGARTRVI 126 (243)
Q Consensus 76 ~~d~G~Y~C~~~~-------~~------------~------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~ 126 (243)
.+|+|.|.|.+.+ .. . .......|.|.. +|.+...... .....|+.+.|.
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g~~~~l~ 189 (267)
T 3u1s_H 111 ADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPS-SKSTSGGTAALG 189 (267)
T ss_dssp GGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCC-GGGEETTEEEEE
T ss_pred hhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCC-cccCCCCcEEEE
Confidence 9999999999862 10 0 011123555542 2222211111 233578999999
Q ss_pred EEeecCCC-CCEEEEEeCCEecCCCCCe--eEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 127 CGVTHGDP-PLTIRWLKDGKPLSPRFPV--NVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 127 C~~~~~~p-~~~~~W~~~~~~~~~~~~~--~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
|.+....| ++.+.| ++..+...... .....++ ..+.|.|.....+| +.|+|.+.+..+.......+
T Consensus 190 C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 261 (267)
T 3u1s_H 190 CLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 261 (267)
T ss_dssp EEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEEC
T ss_pred EEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEc
Confidence 99975566 678999 55444321110 0111111 13568888888888 99999999987655444443
No 313
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.62 E-value=3.8e-15 Score=90.20 Aligned_cols=78 Identities=17% Similarity=0.389 Sum_probs=61.6
Q ss_pred cCCCccCCCCCc--ccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPER--TLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~~--~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.||.+....++. .+.+|+.+.|.|.+. + |.+.+.|+|+|..+....++.+...+ ....|.|.+++.+|+|.|+|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~-~-p~~~v~W~k~g~~i~~~~~~~i~~~~-~~~~L~I~~v~~~D~G~Y~C~ 79 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVD-R-EDAPVRWYKDGQEVEESDFVVLENEG-PHRRLVLPATQPSDGGEFQCV 79 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECS-C-TTSCCEEEETTSCCCCCSSCEEEEET-TEEEEEESSCCGGGCSEEEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEEC-C-CCcEEEEEECCEEeeeeeeeeEEecC-CeEEEEeCCCChhhcEEEEEE
Confidence 466666555443 456899999999983 4 66789999999999887777665443 256899999999999999999
Q ss_pred EEe
Q psy11132 86 VRN 88 (243)
Q Consensus 86 ~~~ 88 (243)
|.|
T Consensus 80 a~n 82 (91)
T 2lvc_A 80 AGD 82 (91)
T ss_dssp CSS
T ss_pred Ecc
Confidence 854
No 314
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.62 E-value=5.6e-15 Score=101.75 Aligned_cols=117 Identities=18% Similarity=0.279 Sum_probs=88.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEee-ccceeEEEEeecCCCCCeeEEEEEEccCcc-eeee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTAAQ-ARYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~ 192 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+........... ....+.|.|.+++.+|+|.|+|.+.|..|. ....
T Consensus 12 ~~v~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 90 (182)
T 1rhf_A 12 LTVSQGQPVKLNCSV-EGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQP 90 (182)
T ss_dssp EEEETTCCEEEEEEE-ESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCC
T ss_pred eEEeCCCcEEEEEEE-eCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEE
Confidence 456789999999999 4888999999999998876644333222 222478999999999999999999998775 4567
Q ss_pred EEEEEEeecCCCCCee-------eeeccceeeeccCcccc--c-ccceEEeCCee
Q psy11132 193 SKLQVKGNLNRLPPSY-------TLVFSQASYMSTSYYSF--E-QDSWMIDNENY 237 (243)
Q Consensus 193 ~~l~v~~~~~~~~p~~-------~~~~~~~~~~~~~~~~~--~-~~~W~~~~~~~ 237 (243)
+.|.|. .+|.+ .+..+..+.+.|..... + .+.|+++|..+
T Consensus 91 ~~l~V~-----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~ 140 (182)
T 1rhf_A 91 VWLTVE-----GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKI 140 (182)
T ss_dssp EEEEEE-----CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEEC
T ss_pred EEEEEe-----cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeEC
Confidence 888887 44544 34556677888876554 4 79999998654
No 315
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.61 E-value=1.1e-14 Score=90.21 Aligned_cols=91 Identities=19% Similarity=0.365 Sum_probs=72.8
Q ss_pred cCCCccCCCCC-cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEE
Q psy11132 8 VPPKLSPTNPE-RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTV 86 (243)
Q Consensus 8 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 86 (243)
.+|.+...+.+ ..+.+|+.+.|.|.+. .|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~~v~W~k~g~~i~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA--DPKLEVKWYKNGQEIRPSTKYIFEHKG-CQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES--CTTSCEEEEESSCBCCCBTTEEEEEET-TEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec--CCCceEEEEECCEECCCCCCEEEEecC-CEEEEEEcCCCcCcCEEEEEEE
Confidence 46777766655 5788999999999994 577899999999998877776655332 2458999999999999999999
Q ss_pred EeCCCcceeEEEEEEEcCC
Q psy11132 87 RNMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 87 ~~~~~~~~~~~~l~v~~~p 105 (243)
+.....+.|.|..+|
T Consensus 83 ----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ----GDEKCSTELFVRSGP 97 (100)
T ss_dssp ----TTEEEEEEEEECCSC
T ss_pred ----CCceEEEEEEEecCC
Confidence 556677888887765
No 316
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=6.2e-16 Score=98.46 Aligned_cols=102 Identities=15% Similarity=0.165 Sum_probs=79.1
Q ss_pred EEEecCC-CccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeE
Q psy11132 4 IFSTVPP-KLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNY 82 (243)
Q Consensus 4 l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 82 (243)
|.|..+| .+...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.........|.|.+++.+|+|.|
T Consensus 7 l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (115)
T 2cr6_A 7 GLVQGRRVHIIEDLEDVDVQEGSSATFRCRIS-PANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTI 85 (115)
T ss_dssp CCCCSSCCEEEECCCEEEEETTSCEECCCEEE-STTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEE
T ss_pred EEEcCCCCeEeccCccEEEeCCCcEEEEEEEc-CCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEE
Confidence 4555555 666667788899999999999996 77888999999999988766554432223356899999999999999
Q ss_pred EEEEEeCCCcceeEEEEEEEcCCCcccc
Q psy11132 83 SCTVRNMVAEDTQVQRLIVNVPPKIESF 110 (243)
Q Consensus 83 ~C~~~~~~~~~~~~~~l~v~~~p~~~~~ 110 (243)
+|.+ +.....+.|.|..+|.+...
T Consensus 86 ~C~~----g~~~~~~~L~V~~~p~~~~~ 109 (115)
T 2cr6_A 86 YFEA----GDQRASAALRVTEKPSVFSR 109 (115)
T ss_dssp EEEE----TTEECCEEEEEECCSSCCSS
T ss_pred EEEE----CCeeEEEEEEEECCCceecc
Confidence 9993 55666788999888765443
No 317
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.61 E-value=1.3e-14 Score=100.59 Aligned_cols=121 Identities=21% Similarity=0.351 Sum_probs=87.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEe-CCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce-eee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLK-DGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA-RYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~ 192 (243)
..+.+|+.+.|.|.+ .+.|. .+.|++ ++..+.......... ......|.|.++..+|+|.|+|.+.|..|.. ...
T Consensus 12 ~~v~~G~~v~L~C~~-~~~p~-~v~W~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~ 88 (189)
T 2v44_A 12 VELSVGESKFFTCTA-IGEPE-SIDWYNPQGEKIISTQRVVVQK-EGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEAT 88 (189)
T ss_dssp EEEETTCCEEEEEEE-EECCS-EEEEECTTSCBCCCCSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEE
T ss_pred eEEecCCcEEEEEEe-ecCCe-eEEEEeCCCCccCCCceEEEEC-CCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEE
Confidence 345789999999999 57776 999999 777776655444433 3345689999999999999999999998865 566
Q ss_pred EEEEEEeecC--CCCCeeeeeccceeeeccCccccc--ccceEEeCCeeE
Q psy11132 193 SKLQVKGNLN--RLPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNENYV 238 (243)
Q Consensus 193 ~~l~v~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~~ 238 (243)
+.+.|...+. ..+....+..+..+.+.|.....| .+.|+++|..+.
T Consensus 89 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 138 (189)
T 2v44_A 89 VVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 138 (189)
T ss_dssp EEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CE
T ss_pred EEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEe
Confidence 7777763221 112223556778888999776554 899999987654
No 318
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.61 E-value=1.2e-15 Score=95.99 Aligned_cols=98 Identities=24% Similarity=0.395 Sum_probs=65.6
Q ss_pred EEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCe
Q psy11132 97 QRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSG 176 (243)
Q Consensus 97 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 176 (243)
+.+.+..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.+.|++++..+......... .....|.|.++..+|+|
T Consensus 3 ~~v~~~~~P~~~~~~~~-~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~D~G 77 (108)
T 3kvq_A 3 LTVLERVAPTITGNLEN-QTTSIGESIEVSCTA-SGNPPPQIMWFKDNETLVEDSGIVLK---DGNRNLTIRRVRKEDEG 77 (108)
T ss_dssp --------CCCBSCCCC-EEEETTCCEEEECBC-C----CCEEEEESSSBCCCBTTEEEE---TTTTEEEECSCCGGGCE
T ss_pred eeECccCCCceecCCCC-eEEeCCCeEEEEEEC-cCcCCCeEEEEECCeEcccCCCeEEe---CCCcEEEEeecCcccCE
Confidence 34556666766554433 567789999999999 68899999999999888765443332 22467999999999999
Q ss_pred eEEEEEEccCcceeeeEEEEEEe
Q psy11132 177 EYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 177 ~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
.|+|.|.|..|.....+.|.|.+
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 78 LYTCQACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp EEEEEEC----CEEEEEEEEEEC
T ss_pred EEEEEEEeCCCceEEEEEEEEeC
Confidence 99999999999999999999883
No 319
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=5.2e-15 Score=92.39 Aligned_cols=93 Identities=19% Similarity=0.331 Sum_probs=73.0
Q ss_pred cCCCccCCCCC---cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 8 VPPKLSPTNPE---RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 8 ~~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
.||.+...+.. ..+.+|+.+.|.|.+. +.+.+ +.|++++..+....++.+.... ....|.|.+++.+|+|.|+|
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~-~~p~~-v~W~k~g~~~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C 82 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELS-RVDFP-ATWYKDGQKVEESELLVVKMDG-RKHRLILPEAKVQDSGEFEC 82 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECS-STTCC-CEEEETTEECCCBTTBEEEEET-TEEEEEESSCCTTTCEEEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEec-CCCCc-cEEeeCCEECCCCCCEEEEeCC-CEEEEEECCCChhhCEEEEE
Confidence 46666666666 6889999999999995 66776 9999999998877666555322 25689999999999999999
Q ss_pred EEEeCCCcceeEEEEEEEcCCCc
Q psy11132 85 TVRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
.+.|.. ..+.|.|.++|..
T Consensus 83 ~a~n~~----~~~~l~V~~~P~p 101 (104)
T 2e6p_A 83 RTEGVS----AFFGVTVQDPSGP 101 (104)
T ss_dssp ECSSCC----CCEEEEEECCCCS
T ss_pred EECCce----EEEEEEEcCCCCC
Confidence 998763 3567888877653
No 320
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.61 E-value=9.6e-16 Score=95.05 Aligned_cols=84 Identities=23% Similarity=0.403 Sum_probs=66.4
Q ss_pred CCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeE
Q psy11132 17 PERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQV 96 (243)
Q Consensus 17 ~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 96 (243)
....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+............|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 16 ~~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 94 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAG-GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 94 (100)
T ss_dssp CEEEECTTCCEEEECCEE-EESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cEEEecCCCEEEEEEEcc-ccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEE
Confidence 356788999999999995 7788899999999988764432211222235689999999999999999999999987777
Q ss_pred EEEEE
Q psy11132 97 QRLIV 101 (243)
Q Consensus 97 ~~l~v 101 (243)
+.|.|
T Consensus 95 ~~l~V 99 (100)
T 3caf_A 95 YHLDV 99 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 321
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=3.5e-15 Score=93.00 Aligned_cols=93 Identities=23% Similarity=0.399 Sum_probs=75.3
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+. + +.+.+.|++++..+....++.+..... ...|.|.+++.+|+|.|+|.+.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~-~-~~~~v~W~k~g~~~~~~~~~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELS-R-AGTPVHWLKDRKAIRKSQKYDVVCEGT-MAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEES-S-SSCCCCEEESSCBCCCSSSEEEEEETT-EEEEEESSCCTTTCSEEEEECS
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEe-C-CCCcEEEEECCEEccCCCCEEEEECCC-EEEEEECCCCcccCEEEEEEEc
Confidence 467787777888999999999999995 5 667899999999988777666554322 5689999999999999999998
Q ss_pred eCCCcceeEEEEEEEcCCCc
Q psy11132 88 NMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~ 107 (243)
| ....+.|.|..+|..
T Consensus 84 n----~~~~~~l~V~~~p~~ 99 (103)
T 2edf_A 84 A----SKSTASLHVEEKASG 99 (103)
T ss_dssp S----CEEEEEEEECCCSSS
T ss_pred c----CCcEEEEEEeCCCCC
Confidence 7 356778888776643
No 322
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.61 E-value=2.3e-15 Score=104.56 Aligned_cols=120 Identities=19% Similarity=0.244 Sum_probs=87.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc-eeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-ARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~-~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.......... .....|.|.+++.+|+|.|+|.+.|..|. .....
T Consensus 17 ~~~~~G~~v~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 93 (192)
T 2iep_A 17 VDALVEEVATFMCAV-ESYPQPEISWTRNKILIKLFDTRYSIR--ENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCG 93 (192)
T ss_dssp EEEETTSCEEEECCE-EEESCCEEEEEETTEECCTTCTTEEEE--GGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEE
T ss_pred eeeeCCCcEEEEeeC-CCCCCCeEEEEECCEEccccCccEEEc--CCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEE
Confidence 446789999999999 578888999999999887533222221 12357999999999999999999998877 34556
Q ss_pred EEEEEeec--CCCCCeeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 194 KLQVKGNL--NRLPPSYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
.+.|...+ ...+....+..+..+.+.|.....+ .+.|+++|..+
T Consensus 94 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~ 141 (192)
T 2iep_A 94 ALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSAL 141 (192)
T ss_dssp EEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEEC
T ss_pred EEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEc
Confidence 66666321 1123334566778888999875554 89999988654
No 323
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=4.6e-15 Score=94.86 Aligned_cols=81 Identities=20% Similarity=0.372 Sum_probs=67.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+... ..... .......|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 34 ~~v~~G~~~~l~C~~-~g~P~p~i~W~k~g~~l~~~-~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 110 (118)
T 2e7c_A 34 YIRKVGEQLNLVVPF-QGKPRPQVVWTKGGAPLDTS-RVHVR-TSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIR 110 (118)
T ss_dssp EEEESSSCEEEEEEE-EEESCCEEEEEETTEECCCS-SCEEE-ECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEE
T ss_pred EEEECCCEEEEEEEE-ccCCCCEEEEEECCEECCCC-cEEEE-ECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEE
Confidence 456789999999999 58999999999999998732 22222 3334577999999999999999999999999888999
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 111 l~V~ 114 (118)
T 2e7c_A 111 IRVV 114 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 324
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=7.1e-15 Score=92.70 Aligned_cols=95 Identities=21% Similarity=0.252 Sum_probs=71.8
Q ss_pred CCccCCCCCcccccCCeEEEEEEeeCC--CCCceeEEEECCe-eecC--CCceEEEEee-----eeceEEEEeecCCCCC
Q psy11132 10 PKLSPTNPERTLNVGERASLICSITKG--DIPLTIKWLKDGR-YLDN--SAALSITHVD-----QYNSMLVIDSVSARHS 79 (243)
Q Consensus 10 p~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~~v~W~~~~~-~~~~--~~~~~~~~~~-----~~~~~l~i~~~~~~d~ 79 (243)
+.+...+.++.+.+|++++|.|.+.+. .|.+.|+|||+.. .+.. ..++.+.... .....|+|.+++..|+
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDR 92 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhC
Confidence 456666888899999999999999632 3678999999742 2211 2333332211 1257899999999999
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEcC
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNVP 104 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~~ 104 (243)
|.|+|.+.+..+..+..+.|.|..+
T Consensus 93 G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 93 GYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp SCEEEEEECSSCEEEEEECCEEECC
T ss_pred EEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999999998764
No 325
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=2.2e-14 Score=99.50 Aligned_cols=105 Identities=21% Similarity=0.288 Sum_probs=82.4
Q ss_pred CCCC-CCcEEEEEEeecCCCC--CEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 116 GLPE-GARTRVICGVTHGDPP--LTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 116 ~~~~-g~~~~l~C~~~~~~p~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
.+.. |+.+.|.|.+. +.|. +.+.|++++..+....... ....|.|.++..+|+|.|+|.|.|. +.....
T Consensus 13 ~v~~~G~~v~l~C~~~-~~~~~~~~v~W~~~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~ 84 (190)
T 2wv3_A 13 IIRDSLLPVTLQCNLT-SSSHTLMYSYWTKNGVELTATRKNA------SNMEYRINKPRAEDSGEYHCVYHFV-SAPKAN 84 (190)
T ss_dssp ECCCSSSCEEEEEEEE-ECSSCEEEEEEEETTEECTTCCBCC------SEEEEEESSCCGGGCEEEEEEEEET-TEEEEE
T ss_pred EEccCCceEEEEEEec-cCCCCceEEEEEECCEECcccceEe------ccEEEEEecCCcccCEEEEEEEEeC-Cccccc
Confidence 3445 99999999994 6665 8999999999887653222 3578999999999999999999999 888888
Q ss_pred EEEEEEeecCCCCCeee-------eeccceeeeccCcccc--cccceEEe
Q psy11132 193 SKLQVKGNLNRLPPSYT-------LVFSQASYMSTSYYSF--EQDSWMID 233 (243)
Q Consensus 193 ~~l~v~~~~~~~~p~~~-------~~~~~~~~~~~~~~~~--~~~~W~~~ 233 (243)
+.|.|. .+|.+. +..+..+.+.|...+. +.+.|+++
T Consensus 85 ~~l~V~-----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~ 129 (190)
T 2wv3_A 85 ATIEVK-----AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKK 129 (190)
T ss_dssp EEEEEE-----CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEE
T ss_pred EEEEEe-----cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEc
Confidence 888888 555543 4456677888876544 48999994
No 326
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.60 E-value=3.5e-15 Score=93.68 Aligned_cols=82 Identities=26% Similarity=0.436 Sum_probs=69.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.......... +.....|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 23 ~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 100 (107)
T 3irg_B 23 VRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLAASERLSFPA-DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAA 100 (107)
T ss_dssp EEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEECCE-ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCeEEEEEEE-eecCCCEEEEEECCeECCCCCcEEEEe-CCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEE
Confidence 456789999999999 688999999999999987665544332 233458999999999999999999999999888888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 101 l~V~ 104 (107)
T 3irg_B 101 VTVL 104 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9888
No 327
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.6e-14 Score=89.00 Aligned_cols=93 Identities=15% Similarity=0.200 Sum_probs=75.1
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+....++.+.. ......|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~-- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCKT--EHPAATVTWRKGLLELRASGKHQPSQ-EGLTLRLTISALEKADSDTYTCD-- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEEC--SSCCSCCEEEESSCBCCSSSSEEEEE-ETTEEEEEEESCCTTTCSEEEEE--
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEEe--CCCCCeEEEEeCCEECCCCCeEEEEe-CCCEEEEEECCCCcccCEEEEEE--
Confidence 47788888888999999999999995 66777999999999988777766543 22245899999999999999998
Q ss_pred eCCCcceeEEEEEEEcCCCc
Q psy11132 88 NMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~~ 107 (243)
.+.....+.|.|...|..
T Consensus 82 --~g~~~~~~~l~V~~~p~~ 99 (103)
T 2dku_A 82 --IGQAQSRAQLLVQGRRSG 99 (103)
T ss_dssp --CSSCBCCEEEEEECSCCC
T ss_pred --eCCceEEEEEEEeCccCC
Confidence 456666788888876643
No 328
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.60 E-value=6.2e-15 Score=104.47 Aligned_cols=123 Identities=23% Similarity=0.319 Sum_probs=86.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe--eEEeec-cceeEEEEeecCCCCCeeEEEEEEccCcce-e
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV--NVSDLD-SFSSLLSINSVSAAHSGEYTCVASNTAAQA-R 190 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~--~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~ 190 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+...... ...... .....+.|.+++.+|+|.|+|.+.|..|.. .
T Consensus 19 ~~v~~G~~v~L~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~ 97 (217)
T 2vr9_A 19 LVVKKNEPATLNCKV-EGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVS 97 (217)
T ss_dssp EEECTTSCEEECCEE-ECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEEC
T ss_pred eEEeCCCcEEEEEEc-CCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCcccc
Confidence 557889999999999 58889999999999988764221 111111 111223688899999999999999998865 3
Q ss_pred eeEEEEEEeec---CCCCCeeeeeccceeeeccCc-ccc--cccceEEeCCeeE
Q psy11132 191 YSSKLQVKGNL---NRLPPSYTLVFSQASYMSTSY-YSF--EQDSWMIDNENYV 238 (243)
Q Consensus 191 ~~~~l~v~~~~---~~~~p~~~~~~~~~~~~~~~~-~~~--~~~~W~~~~~~~~ 238 (243)
..+.+.|.... ...|....+..+..+.+.|.. ... +.+.|+++|..+.
T Consensus 98 ~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 98 RHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp CCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred ccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 45566655321 112334556778889999977 444 4899999987654
No 329
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=96.37 Aligned_cols=85 Identities=32% Similarity=0.497 Sum_probs=71.3
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.................|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 19 ~~v~~G~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 97 (110)
T 2dm3_A 19 LTVQEGKLCRMDCKV-SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLE 97 (110)
T ss_dssp EEEESSSCBCCEEEE-ECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCE
T ss_pred EEEeCCCEEEEEEEE-EEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEE
Confidence 456789999999999 5899999999999998876655444444444578999999999999999999999999888899
Q ss_pred EEEEee
Q psy11132 195 LQVKGN 200 (243)
Q Consensus 195 l~v~~~ 200 (243)
|.|...
T Consensus 98 l~V~~~ 103 (110)
T 2dm3_A 98 LVVAAK 103 (110)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 998843
No 330
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=91.90 Aligned_cols=98 Identities=23% Similarity=0.294 Sum_probs=74.8
Q ss_pred EEecCCCccCCCCC---cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 5 FSTVPPKLSPTNPE---RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 5 ~v~~~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
.+..||.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.
T Consensus 6 ~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~--~p~~~v~W~k~g~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~ 82 (113)
T 2cpc_A 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC--RPWAEVRWTKDGEEVVESPALLLQKED-TVRRLVLPAVQLEDSGE 82 (113)
T ss_dssp CCCSCSCSEEESCSCEEEEEETTCCEEEEEEES--CTTCCCEEEETTEECCCBTTBEEEECS-SEEEEEESSCCTTTCEE
T ss_pred ccccCCcEEEccCCceeEEEEcCCeEEEEEEec--CCCCeEEEEECCEECccCCCEEEEECC-CEEEEEECCCCcccCEE
Confidence 34556655544443 5688999999999983 677899999999998876666654332 24689999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCccc
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKIES 109 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~~~ 109 (243)
|+|.+.| .+..+.|.|..+|....
T Consensus 83 Y~C~a~n----~~~~~~l~V~~~p~~~~ 106 (113)
T 2cpc_A 83 YLCEIDD----ESASFTVTVTEPPVRII 106 (113)
T ss_dssp EEEESSS----CEEEEEEEEECCCCCCC
T ss_pred EEEEEec----CcEEEEEEEecCCchhc
Confidence 9999987 55678888888775543
No 331
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.59 E-value=1.5e-14 Score=91.64 Aligned_cols=97 Identities=20% Similarity=0.324 Sum_probs=76.5
Q ss_pred eEEEe-cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCee
Q psy11132 3 VIFST-VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGN 81 (243)
Q Consensus 3 ~l~v~-~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 81 (243)
.|.|. .||.+...+....+.+|+++.|.|.+. +. +.+.|++++..+....++.+.... ....|.|.+++.+|+|.
T Consensus 12 ~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~-~~--p~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~ 87 (113)
T 2edh_A 12 MLTVRALPIKFTEGLRNEEATEGATAVLRCELS-KM--APVEWWKGHETLRDGDRHSLRQDG-ARCELQIRGLVAEDAGE 87 (113)
T ss_dssp CCCCCCSCCCEEECCCCCEECTTSCEEEEEEES-SC--CCCEEEESSSBCCCSSSEEEEEET-TEEEEEECSCCSTTCEE
T ss_pred EEEEEcCCCcccccCCceEEeCCCeEEEEEEEC-CC--CcEEEEECCEECCCCCcEEEEECC-CEEEEEECCCChhhCEE
Confidence 35556 456887777788899999999999994 44 579999999999877777655432 24689999999999999
Q ss_pred EEEEEEeCCCcceeEEEEEEEcCCCc
Q psy11132 82 YSCTVRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 82 Y~C~~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
|+|.+ +.....+.|.|..+|..
T Consensus 88 Y~C~a----~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 88 YLCMC----GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp EEEEE----TTEEEEEEEEECCCCCS
T ss_pred EEEEe----CCCCEEEEEEEeCCCCC
Confidence 99999 56667788888776643
No 332
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.59 E-value=4.6e-14 Score=96.21 Aligned_cols=166 Identities=11% Similarity=0.149 Sum_probs=107.4
Q ss_pred CccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCC
Q psy11132 11 KLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMV 90 (243)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 90 (243)
.+.+.++...|..|+++.|+|.+. ...+-.+.|... +. + .......+-..|.|.+++ +.|.|.|.+.-..
T Consensus 4 ~v~v~P~~~~V~~G~S~~l~Cs~~-c~~p~~~glet~---l~---~-~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~ 73 (192)
T 1zxq_A 4 EVHVRPKKLAVEPKGSLEVNCSTT-CNQPEVGGLETS---LN---K-ILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSG 73 (192)
T ss_dssp CEEEESSEEEECTTEEEEEEEEES-CSSCSEEEEECS---SE---E-EEEEEETTEEEEEEEEEC--SCEEEEEEEEETT
T ss_pred EEEEeCCCcEEeCCCcEEEEEECC-CCCccccccccc---cC---c-eEEcCCCCeEEEEEeccc--cCCeeEEEEECCC
Confidence 344556677789999999999984 333323444421 11 0 011112223569999998 7899999998765
Q ss_pred CcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCC--EEEEEeCCEecCCCCCeeEEee-ccceeEEEE
Q psy11132 91 AEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL--TIRWLKDGKPLSPRFPVNVSDL-DSFSSLLSI 167 (243)
Q Consensus 91 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~~-~~~~~~l~i 167 (243)
......+.|.|..+|...........+.+|+.++|.|.+.++.|.. ++.|++++..+........... ......+.+
T Consensus 74 ~~~~~~~~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~~~ 153 (192)
T 1zxq_A 74 KQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNS 153 (192)
T ss_dssp EEEEEEEEEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEE
T ss_pred cceEEEEEEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEEEE
Confidence 5667888999998887665543224578999999999998778865 4799999887753210000000 111223333
Q ss_pred eecCCCCCe-eEEEEEEccCc
Q psy11132 168 NSVSAAHSG-EYTCVASNTAA 187 (243)
Q Consensus 168 ~~~~~~d~g-~y~C~~~n~~g 187 (243)
.+.++|.| .|+|.|.-..+
T Consensus 154 -~~~r~D~g~~~sC~A~L~L~ 173 (192)
T 1zxq_A 154 -TADREDGHRNFSCLAVLDLM 173 (192)
T ss_dssp -ECCGGGGGCEEEEEEEEECG
T ss_pred -ecchhhCCceEEEEEEecCc
Confidence 45667777 99999997763
No 333
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=1.7e-14 Score=92.17 Aligned_cols=96 Identities=25% Similarity=0.363 Sum_probs=71.9
Q ss_pred EEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeec---cceeEEEEeecCCCC
Q psy11132 98 RLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD---SFSSLLSINSVSAAH 174 (243)
Q Consensus 98 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d 174 (243)
.|.|..+|.+..... . .......|.|.+ .|.|.+.+.|+++|..+............ ...+.|.|.++..+|
T Consensus 2 ~L~V~~pP~i~~~~~--~--~~~~~~~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 76 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEE--P--ELRLEHCIEFVV-RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYN 76 (118)
T ss_dssp --CCCCCCCCCCCCC--C--CCCCEEEEEEEE-ECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGG
T ss_pred EEEEecCCceeccCC--C--eeccceEEEEEe-eeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhc
Confidence 456667777554321 1 233667889999 58999999999999998876544332211 135689999999999
Q ss_pred CeeEEEEEEccCcceeeeEEEEEE
Q psy11132 175 SGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 175 ~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
+|.|+|.|.|..|....++.+.|.
T Consensus 77 ~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 77 NGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCS
T ss_pred CEEEEEEEECCCCeEeeEEEEEEc
Confidence 999999999999999988888777
No 334
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.59 E-value=5.9e-15 Score=91.27 Aligned_cols=82 Identities=28% Similarity=0.452 Sum_probs=69.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .+.|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 16 ~~v~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 93 (99)
T 3puc_A 16 TTVSSDSVAKFAVKA-TGEPRPTAIWTKDGKAITQGGKYKLSE-DKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCK 93 (99)
T ss_dssp EEEESSSCEEEEEEE-EEESCCEEEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCcEEEEEEE-EecCCCEEEEEECCEECcCCCCEEEEE-eCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 456789999999999 588999999999999988765554433 233568999999999999999999999999988888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 94 l~V~ 97 (99)
T 3puc_A 94 LTIK 97 (99)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 335
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.59 E-value=1.6e-14 Score=89.92 Aligned_cols=92 Identities=22% Similarity=0.368 Sum_probs=73.9
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+++.|.|.+. +.+.+ +.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~-v~W~k~~~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~-- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLS-SVAAP-VKWCYGNNVLRPGDKYSLRQEG-AMLELVVRNLRPQDSGRYSCS-- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECS-SCCCS-CEEEESSSBCCCSSSEEEEECS-SEEEEEECSCCTTTCCCEEEE--
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEe-CCCCC-eEEEECCEECCCCCcEEEEEcC-CEEEEEEccCCcccCEEEEEE--
Confidence 578888778889999999999999985 67777 9999999988776666655432 356799999999999999998
Q ss_pred eCCCcceeEEEEEEEcCCC
Q psy11132 88 NMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~ 106 (243)
.+.....+.|.|..+|.
T Consensus 82 --~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 82 --FGDQTTSATLTVTALPS 98 (103)
T ss_dssp --CSSCBCCBCEEEECCCC
T ss_pred --ECCcEEEEEEEEEeccc
Confidence 45555667788877664
No 336
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.59 E-value=1.2e-14 Score=91.81 Aligned_cols=99 Identities=21% Similarity=0.441 Sum_probs=72.2
Q ss_pred eEEEecCCCccCCCCCcccccCCeEEEEEEeeCC-CCCceeEEEECCeeecCCCceEEEEee-------eeceEEEEeec
Q psy11132 3 VIFSTVPPKLSPTNPERTLNVGERASLICSITKG-DIPLTIKWLKDGRYLDNSAALSITHVD-------QYNSMLVIDSV 74 (243)
Q Consensus 3 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~ 74 (243)
......+|.+...+....+.+|+.++|.|.+.+. .+.+.+.|++++..+............ .....|.|.++
T Consensus 4 ~c~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 83 (112)
T 3so5_A 4 VCDDFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNV 83 (112)
T ss_dssp ----CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSC
T ss_pred ecCCCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecc
Confidence 3445678888888888899999999999998633 345799999999887654321111111 11478999999
Q ss_pred CCCCCeeEEEEEEeCCCc-ceeEEEEEE
Q psy11132 75 SARHSGNYSCTVRNMVAE-DTQVQRLIV 101 (243)
Q Consensus 75 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~v 101 (243)
+.+|+|.|+|.+.|..|. .+..+.|.|
T Consensus 84 ~~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 84 EFTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 999999999999998887 456666665
No 337
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=6.1e-15 Score=96.50 Aligned_cols=82 Identities=22% Similarity=0.306 Sum_probs=64.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC----------------------------EecC-CCCCeeEEeeccceeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG----------------------------KPLS-PRFPVNVSDLDSFSSLL 165 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~----------------------------~~~~-~~~~~~~~~~~~~~~~l 165 (243)
..+..|+++.|.|.+ .|.|.|.++|++++ ..+. ........ .....+.|
T Consensus 28 ~~v~~G~~v~L~C~~-~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~-~~~~~s~L 105 (139)
T 1gxe_A 28 IVVVAGNKLRLDVPI-SGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVE-TTKDRSIF 105 (139)
T ss_dssp EEESSSSCCCCEEEC-CSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEE-EETTEEEE
T ss_pred EEEeCCCeEEEEEEE-EEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEE-eCCCEEEE
Confidence 457889999999999 69999999999988 3332 22222222 22335789
Q ss_pred EEeecCCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 166 SINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 166 ~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 999999999999999999999998888888774
No 338
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.58 E-value=2.9e-14 Score=87.37 Aligned_cols=87 Identities=14% Similarity=0.225 Sum_probs=69.3
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
+|.+...+....+.+|+.+.|.|.+ +.+.+.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a-- 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET--ERAGVKVRWQRGGSDISASNKYGLATEG-TRHTLTVREVGPADQGSYAVIA-- 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC--SSSSCCCEEECSSSEECSSTTCEEEEET-TEEEEEESSCCTTCCSEEEEEE--
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe--CCCCCeEEEEECCEECCCCCcEEEEEcC-CEEEEEEcCCCcccCEEEEEEE--
Confidence 3566666778889999999999998 5677799999999998877766654332 2468999999999999999999
Q ss_pred CCCcceeEEEEEEE
Q psy11132 89 MVAEDTQVQRLIVN 102 (243)
Q Consensus 89 ~~~~~~~~~~l~v~ 102 (243)
+.....+.|.|.
T Consensus 83 --g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 --GSSKVKFDLKVI 94 (95)
T ss_dssp --TTEEEEEEEEEE
T ss_pred --CCceEEEEEEEe
Confidence 445555666664
No 339
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.58 E-value=6.8e-15 Score=105.13 Aligned_cols=117 Identities=23% Similarity=0.393 Sum_probs=89.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.................|.|.++..+|+|.|+|.+.|..|.....+.
T Consensus 29 ~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 107 (231)
T 3ojm_B 29 HAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH 107 (231)
T ss_dssp EEEETTSCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEccCCCEEEEEec-ccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEE
Confidence 456789999999999 5788899999999998875443322222233468999999999999999999999998888888
Q ss_pred EEEEeecCCC-------CCeeeeeccceeeeccCcccc--cccceEE
Q psy11132 195 LQVKGNLNRL-------PPSYTLVFSQASYMSTSYYSF--EQDSWMI 232 (243)
Q Consensus 195 l~v~~~~~~~-------~p~~~~~~~~~~~~~~~~~~~--~~~~W~~ 232 (243)
+.|....... +....+..+..+.+.|..... +.+.|++
T Consensus 108 l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~ 154 (231)
T 3ojm_B 108 LDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIK 154 (231)
T ss_dssp EEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEE
T ss_pred EEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEE
Confidence 8887432211 233456678888999987655 4899999
No 340
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.58 E-value=1e-14 Score=101.73 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=82.4
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc--eeeeE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ--ARYSS 193 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~--~~~~~ 193 (243)
.+.+|++++|.|.+ .+ +.+.+.|++++..+.... ...........|.|.+++.+|+|.|+|.|.|..|. ....+
T Consensus 15 ~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~--~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 90 (196)
T 3p2t_A 15 VISWGNSVTIWCQG-TL-EAREYRLDKEESPAPWDR--QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPL 90 (196)
T ss_dssp EEETTCCEEEEEEC-CT-TCCEEEEEETTSCSCSEE--ECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCE
T ss_pred cCCCCCcEEEEeeC-CC-CCCEEEEEECCCCCcccc--cccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccE
Confidence 56789999999998 46 678999999998765321 11111133578999999999999999999999883 34556
Q ss_pred EEEEEeecCCCCCeee------eeccceeeeccCcccc-cccceEEeCCee
Q psy11132 194 KLQVKGNLNRLPPSYT------LVFSQASYMSTSYYSF-EQDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~~~~~p~~~------~~~~~~~~~~~~~~~~-~~~~W~~~~~~~ 237 (243)
.|.|.+.. .+|.+. +..++.+.+.|....- +.+.|+++|..+
T Consensus 91 ~l~V~~~~--~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~ 139 (196)
T 3p2t_A 91 ELVMTGAY--SKPTLSALPSPLVTSGKSVTLLCQSRSPMDTFLLCKERAAH 139 (196)
T ss_dssp EEEEECSS--CCCEEEEESCSEECTTCCEEEEEEEEEEEEEEEEEETTCCC
T ss_pred EEEecCCC--CCCEEEeCCcceecCCCeEEEEEecCCCCCEEEEEeCCCcc
Confidence 67665322 344433 4456778888876543 379999998743
No 341
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.58 E-value=4.6e-14 Score=86.85 Aligned_cols=82 Identities=16% Similarity=0.308 Sum_probs=68.9
Q ss_pred CCCCCCCcEEEEEEeecCC-CCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGD-PPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+. |.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 11 ~~v~~G~~v~l~C~~-~g~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 88 (97)
T 2bk8_A 11 AVGEEGGHVKYVCKI-ENYDQSTQVTWYFGVRQLENSEKYEITY-EDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYA 88 (97)
T ss_dssp EEECTTCCEEEEEEE-ESCCTTCEEEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EEEcCCCcEEEEEEE-eccCCCCEEEEEECCEECcCCCCEEEEE-cCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEE
Confidence 456789999999999 576 889999999999988766554433 33356899999999999999999999999988888
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.|.|.
T Consensus 89 ~l~V~ 93 (97)
T 2bk8_A 89 ELFVK 93 (97)
T ss_dssp EEEET
T ss_pred EEEEE
Confidence 88876
No 342
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.3e-14 Score=89.76 Aligned_cols=78 Identities=17% Similarity=0.312 Sum_probs=64.7
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .|.+.+.|+++|..+.....+.+.. .+....|.|.++..+|+|.|+|.|.|. ....++.
T Consensus 17 ~~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~~~~r~~i~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~ 90 (100)
T 2yuz_A 17 QTVNLGKEICLKCEI---SENIPGKWTKNGLPVQESDRLKVVQ-KGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAK 90 (100)
T ss_dssp EEEETTSCCCEEEEC---SSCCCEEEEETTEECCCCSSEEEEE-CSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEE
T ss_pred eEEcCCCCEEEEEEe---CCCCeEEEEECCEECCCCCcEEEEE-eCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEE
Confidence 567889999999998 5778999999999998776655433 334568999999999999999999997 4567788
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 91 L~V~ 94 (100)
T 2yuz_A 91 VHVI 94 (100)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8888
No 343
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=6e-15 Score=96.55 Aligned_cols=85 Identities=22% Similarity=0.352 Sum_probs=67.8
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECC----------------------------eee-cCCCceEEEEeeeec
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDG----------------------------RYL-DNSAALSITHVDQYN 66 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~ 66 (243)
+....+.+|+.+.|.|.+. |.|.+.+.|++++ ..+ ....++.+... ...
T Consensus 25 p~~~~v~~G~~v~L~C~~~-G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~-~~~ 102 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPIS-GDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETT-KDR 102 (139)
T ss_dssp CCEEEESSSSCCCCEEECC-SBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEE-TTE
T ss_pred CCCEEEeCCCeEEEEEEEE-EcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeC-CCE
Confidence 4578899999999999995 8899999999998 444 23344444322 224
Q ss_pred eEEEEeecCCCCCeeEEEEEEeCCCcceeEEEEEEE
Q psy11132 67 SMLVIDSVSARHSGNYSCTVRNMVAEDTQVQRLIVN 102 (243)
Q Consensus 67 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 102 (243)
+.|.|.+++..|+|.|+|.|.|..|.....+.|.|.
T Consensus 103 s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 103 SIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 689999999999999999999999988888888764
No 344
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.57 E-value=7e-15 Score=105.85 Aligned_cols=117 Identities=25% Similarity=0.398 Sum_probs=87.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.................|.|.+++.+|+|.|+|.+.|..|.....+.
T Consensus 25 ~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~ 103 (241)
T 3grw_A 25 LAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 103 (241)
T ss_dssp EEEETTSEEEEECCE-ECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEcCCCeEEEEEEe-cCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEE
Confidence 456789999999999 5889999999999998875443322222333568999999999999999999999998888888
Q ss_pred EEEEeecCCCCC-------eeeeeccceeeeccCcccc--cccceEE
Q psy11132 195 LQVKGNLNRLPP-------SYTLVFSQASYMSTSYYSF--EQDSWMI 232 (243)
Q Consensus 195 l~v~~~~~~~~p-------~~~~~~~~~~~~~~~~~~~--~~~~W~~ 232 (243)
+.|.......|+ ...+..+..+.+.|..... +.+.|++
T Consensus 104 l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~ 150 (241)
T 3grw_A 104 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLK 150 (241)
T ss_dssp EEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEE
T ss_pred EEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEE
Confidence 888743321221 2234456778888877554 4899999
No 345
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=101.83 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=76.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce--eee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~ 192 (243)
..+.+|+++.|.|.+ .+.|. .+.|++++..+..... ..........|.|.++..+|+|.|+|.|.|..|.. +..
T Consensus 14 ~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~--~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~ 89 (196)
T 2d3v_A 14 SVISRGNSVTIRCQG-TLEAQ-EYRLVKEGSPEPWDTQ--NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDP 89 (196)
T ss_dssp SEEETTCCEEEEEEC-CTTCC-EEEEEETTCSSCSEEE--CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCC
T ss_pred CcccCCCeEEEEEeC-CCCCc-EEEEEECCCCCCcccc--cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCcc
Confidence 356789999999998 46655 9999999987653211 01112335789999999999999999999987743 345
Q ss_pred EEEEEEeecCCCCCee------eeeccceeeeccCcccc-cccceEEeCCee
Q psy11132 193 SKLQVKGNLNRLPPSY------TLVFSQASYMSTSYYSF-EQDSWMIDNENY 237 (243)
Q Consensus 193 ~~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~~-~~~~W~~~~~~~ 237 (243)
+.|.|.... .+|.+ .+..++.+.+.|..... +.+.|+++|..+
T Consensus 90 ~~l~V~~~~--~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~~~~W~k~g~~~ 139 (196)
T 2d3v_A 90 LELVVTGFY--NKPTLSALPSPVVTSGENVTLQCGSRLRFDRFILTEEGDHK 139 (196)
T ss_dssp EEEEEECSS--CCCEEEC-----------CEEEEEESSCCSEEEEEEC---C
T ss_pred EEEEecCCC--CCCeEEccCCccccCCCcEEEEEEcCCCCCEEEEEccCCcc
Confidence 677776321 23333 34556778888876544 589999999765
No 346
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.57 E-value=1.5e-14 Score=88.74 Aligned_cols=76 Identities=22% Similarity=0.382 Sum_probs=63.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.| +.+.|++++..+......... ...|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 19 ~~v~~G~~v~l~C~~-~g~p-p~i~W~k~g~~~~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 91 (95)
T 2ckn_A 19 LLVHPGDLLQLRCRL-RDDV-QSINWLRDGVQLVESNRTRIT-----GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFS 91 (95)
T ss_dssp EEECTTSCEEEECCE-ESSC-CEEEEEBTTBCCCCCSSEEEC-----SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEE
T ss_pred EEEcCCCeEEEEEEC-CCCC-CceEEEECCEecCCCCCEEEe-----CCEEEECCCChHHCEEEEEEeccCCCcEEEEEE
Confidence 557899999999999 4777 799999999988765543332 468999999999999999999999999888877
Q ss_pred EEE
Q psy11132 195 LQV 197 (243)
Q Consensus 195 l~v 197 (243)
|.|
T Consensus 92 l~V 94 (95)
T 2ckn_A 92 VNV 94 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 347
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2e-15 Score=93.37 Aligned_cols=78 Identities=28% Similarity=0.460 Sum_probs=64.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .|.|.+.+.|++++..+...... .......|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 21 ~~v~~G~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 95 (99)
T 2yr3_A 21 CAVIEGQDFVLQCSV-RGTPVPRITWLLNGQPIQYARST----CEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAW 95 (99)
T ss_dssp EEECTTCCEEEECEE-EEESCCCCEEEESSSBCSSCCCE----EETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECC
T ss_pred CEEeCCCeEEEEEEE-eeeCCCeEEEEECCEECcccceE----eeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEE
Confidence 457789999999999 58899999999999887754322 1223578999999999999999999999999888777
Q ss_pred EEE
Q psy11132 195 LQV 197 (243)
Q Consensus 195 l~v 197 (243)
|.|
T Consensus 96 l~V 98 (99)
T 2yr3_A 96 VTV 98 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 348
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=102.84 Aligned_cols=112 Identities=18% Similarity=0.250 Sum_probs=84.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce-eeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA-RYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~-~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.|..|.. ...+
T Consensus 28 ~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~ 96 (218)
T 3k0w_A 28 KAVLAGQFVKLCCRA-TGHPFVQYQWFKMNKEIPNGN----------TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWS 96 (218)
T ss_dssp EEEETTSBEEEECEE-TTTTSSEEEEEETTEECTTCC----------SSEEEETTCCGGGCEEEEEEEECTTCCEECCCE
T ss_pred eEEeCCCcEEEEeee-cCCCCCEEEEEECCEECCCCC----------CCEEEEccCChhhCeEeEEEEEcCCCCceeeEE
Confidence 456789999999999 688999999999999886542 3679999999999999999999998755 4557
Q ss_pred EEEEEeecC----------CCCCe-------eeeeccceeeeccCcccc--cccceEEeCCee
Q psy11132 194 KLQVKGNLN----------RLPPS-------YTLVFSQASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~~----------~~~p~-------~~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
.+.|..... ..+|. ..+..+..+.+.|..... +.+.|+++|..+
T Consensus 97 ~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~ 159 (218)
T 3k0w_A 97 QLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPL 159 (218)
T ss_dssp EEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEEC
T ss_pred EEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEEC
Confidence 777763311 01123 344556778888877554 489999988643
No 349
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=100.10 Aligned_cols=107 Identities=14% Similarity=0.065 Sum_probs=78.7
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce--eeeE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSS 193 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~ 193 (243)
.+.+|+++.|.|.+ .+ +.+.+.|++++... ......|.|.+++.+|+|.|+|.|.|..|.. +..+
T Consensus 18 ~v~~G~~v~L~C~~-~~-~~~~~~W~k~g~~~-----------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 84 (184)
T 2gi7_A 18 LVPLEKPVTLRCQG-PP-GVDLYRLEKLSSSR-----------YQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQL 84 (184)
T ss_dssp EEETTCCEEEEEEC-ST-TCSEEEEEETTTCC-----------EESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCE
T ss_pred cccCCCcEEEEEeC-CC-CCCEEEEEECCccc-----------cCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCE
Confidence 56789999999998 46 77899999998751 1124679999999999999999999987643 3456
Q ss_pred EEEEEeecCCCCCeeee------eccceeeeccCcccc-cccceEEeCCee
Q psy11132 194 KLQVKGNLNRLPPSYTL------VFSQASYMSTSYYSF-EQDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~~~~~p~~~~------~~~~~~~~~~~~~~~-~~~~W~~~~~~~ 237 (243)
.|.|.+.. .+|.+.. ..++.+.+.|..... +.+.|+++|..+
T Consensus 85 ~l~V~~~~--~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~ 133 (184)
T 2gi7_A 85 ELVATGVF--AKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPA 133 (184)
T ss_dssp EEEEESSS--CCCEEEEECCCSSCCTTCEEEEEECSSCCCEEEEEECCCCT
T ss_pred EEEecCcC--CCCEEEeCCCceecCCCcEEEEEEcCCCCcEEEEEECCCcC
Confidence 67765321 3444433 346778888876433 489999998654
No 350
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=92.26 Aligned_cols=81 Identities=26% Similarity=0.403 Sum_probs=66.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+........... .+.|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 18 ~~v~~G~~v~l~C~~-~g~p~p~i~W~k~g~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (118)
T 2eo9_A 18 QTVAVDGTFVLSCVA-TGSPVPTILWRKDGVLVSTQDSRIKQLE---NGVLQIRYAKLGDTGRYTCIASTPSGEATWSAY 93 (118)
T ss_dssp EEEETTCEEEEECBC-CCSSCCEEEEEESSSBCCTTSTTEEEEE---TTEEEEESCCGGGCCCEEEEEECSSCEEEEECC
T ss_pred EEEcCCCeEEEEEEE-EecCCCEEEEEECCEECcCCCCeEEEcc---CCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEE
Confidence 457789999999999 6899999999999988865322222111 347999999999999999999999999888888
Q ss_pred EEEEe
Q psy11132 195 LQVKG 199 (243)
Q Consensus 195 l~v~~ 199 (243)
|.|..
T Consensus 94 l~V~~ 98 (118)
T 2eo9_A 94 IEVQE 98 (118)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88883
No 351
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=90.37 Aligned_cols=80 Identities=29% Similarity=0.529 Sum_probs=65.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+.......... ....|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 18 ~~v~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2edj_A 18 QTLAVDGTALLKCKA-TGDPLPVISWLKEGFTFPGRDPRATIQ---EQGTLQIKNLRISDTGTYTCVATSSSGETSWSAV 93 (100)
T ss_dssp EEEESSSEEEECCEE-ECSSCCEEEEEESSSEESSSCSSCEEC---TTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEE
T ss_pred EEEcCCCcEEEEEEE-EEcCCCEEEEEECCEECCCCCCCEEEc---CCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEE
Confidence 456789999999999 589999999999998876432221111 1356999999999999999999999999988999
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 94 l~V~ 97 (100)
T 2edj_A 94 LDVT 97 (100)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9888
No 352
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.56 E-value=1e-14 Score=91.36 Aligned_cols=90 Identities=22% Similarity=0.320 Sum_probs=71.5
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+.+..+.+|+.+.|.|.+. +.+.+ +.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~-~~~~~-v~W~k~g~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVS-DEKVT-GKWYKNGVEVRPSKRITISHVG-RFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEES-CSSCE-EEEEESSCBCCCCSSCEEEEET-TEEEEEESSCCTTTCSCEEEEEE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEc-CCCcc-eEEEcCCEECcCCCCEEEEEeC-CEEEEEECCCCcCCCEEEEEEEc
Confidence 467888888889999999999999995 66666 9999999998877776655332 24689999999999999999999
Q ss_pred eCCCcceeEEEEEEE
Q psy11132 88 NMVAEDTQVQRLIVN 102 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~ 102 (243)
|. ..+..+.|.|.
T Consensus 84 n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 84 GY--ALSLSAKLNFL 96 (106)
T ss_dssp TS--CCCCCBCEEEE
T ss_pred cC--CceEEEEEEEE
Confidence 87 33344455554
No 353
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.56 E-value=1.4e-14 Score=86.30 Aligned_cols=77 Identities=22% Similarity=0.411 Sum_probs=62.3
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+ |.+.+.|+++|..+.....+.... ++....|.|.++..+|+|.|+|.|.| .+.++.
T Consensus 6 v~~~~G~~v~l~C~v-s~-p~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~ 78 (84)
T 2lu7_A 6 VRSTPGGDLELVVHL-SG-PGGPVRWYKDGERLASQGRVQLEQ-AGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFL 78 (84)
T ss_dssp EEECTTSCEEEECCC-SC-CSTTCEEEETTEECCCCSSEEEEE-CSSCEEEEESSCSSTTCEEEEEECTT----TCEEEE
T ss_pred EEEecCCCEEEEEEE-CC-CCcEEEEEECCEEccccccEEEee-cCCeEEEEecCCCCcccEEEEEEECC----EEEEEE
Confidence 456789999999998 56 788899999999998877665543 34457899999999999999999855 456677
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 79 l~V~ 82 (84)
T 2lu7_A 79 VSVE 82 (84)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7776
No 354
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.56 E-value=2.4e-14 Score=87.06 Aligned_cols=83 Identities=19% Similarity=0.362 Sum_probs=67.5
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
++.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ...|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n 71 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAV-GSPIPHYQWFKNELPLTHET----------KKLYMVPYVDLEHQGTYWCHVYN 71 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEE-CSSCCEEEEEETTEECTTCC----------SSEEEESSCCGGGCEEEEEEEEC
T ss_pred ceEEEECCCccEecCCCcEEEEEEec-cCCCCEEEEEcCCeeCCcCC----------CCeEEECCCCHHhCEEEEEEEEc
Confidence 45566666677799999999999985 78888999999998876543 35799999999999999999999
Q ss_pred CCCcc-eeEEEEEEE
Q psy11132 89 MVAED-TQVQRLIVN 102 (243)
Q Consensus 89 ~~~~~-~~~~~l~v~ 102 (243)
..+.. +..+.|.|.
T Consensus 72 ~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 72 DRDSQDSKKVEIIID 86 (91)
T ss_dssp SSCEEECCCEEEEEC
T ss_pred CCCCEEeeeEEEEEe
Confidence 98863 355666664
No 355
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=6.2e-16 Score=99.54 Aligned_cols=101 Identities=23% Similarity=0.339 Sum_probs=80.7
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCce-eEEEECCeeecC--CCceEEEEee---eeceEEEEeecC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLT-IKWLKDGRYLDN--SAALSITHVD---QYNSMLVIDSVS 75 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~-v~W~~~~~~~~~--~~~~~~~~~~---~~~~~l~i~~~~ 75 (243)
+.|.|..||.+.. +....+.+|+.+.|.|.+. +.|.+. +.|++++..+.. ..++.+.... .....|.|.+++
T Consensus 7 ~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~-g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 84 (122)
T 2cry_A 7 GTLTVNGPPIISS-TQTQHALHGEKGQIKCFIR-STPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIV 84 (122)
T ss_dssp CCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEEC-CSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCC
T ss_pred EEEEEecCCCccC-CCeEEEecCCCEEEEEEEe-ecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCC
Confidence 4577889999888 7788899999999999995 777775 999999988875 3444443221 114589999999
Q ss_pred CCCC-eeEEEEEEeCCCcceeEEEEEEEcC
Q psy11132 76 ARHS-GNYSCTVRNMVAEDTQVQRLIVNVP 104 (243)
Q Consensus 76 ~~d~-G~Y~C~~~~~~~~~~~~~~l~v~~~ 104 (243)
.+|. |.|+|.|.|..|.....+.|.|..+
T Consensus 85 ~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 85 RADFQTIYNCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp HHHHHSCEEEEEECSSCEEEEEECCCCSCS
T ss_pred hhhCCceEEEEEECCCCeEEEEEEEEECCC
Confidence 9999 9999999999998887777777643
No 356
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.56 E-value=6.5e-14 Score=87.98 Aligned_cols=91 Identities=21% Similarity=0.397 Sum_probs=72.8
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.||.+...+....+.+|+.+.|.|.+. +. +.+.|++++..+....++.+.... ....|.|.+++.+|+|.|+|.+.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~-~~--p~v~W~k~~~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~ 82 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELS-KV--APVEWKKGPETLRDGGRYSLKQDG-TRCELQIHDLSVADAGEYSCMCG 82 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBS-SS--CCCEEESSSSBCCSSSSCEEEEET-TEEEEEESSCCTTTCSEEEEEET
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeC-CC--CeeEEEECCEECCCCCCEEEEecC-CEEEEEECCCCcccCEEEEEEEc
Confidence 578888888888999999999999984 44 589999999988877776655432 24679999999999999999993
Q ss_pred eCCCcceeEEEEEEEcCCC
Q psy11132 88 NMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~~~p~ 106 (243)
.....+.|.|..+|.
T Consensus 83 ----n~~~~~~l~V~~~p~ 97 (108)
T 2dm7_A 83 ----QERTSATLTVRALPA 97 (108)
T ss_dssp ----TEEEEEECEEECCCS
T ss_pred ----CCEEEEEEEEecCCH
Confidence 345667788877554
No 357
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3.3e-15 Score=92.78 Aligned_cols=91 Identities=16% Similarity=0.304 Sum_probs=69.6
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC----ceEEEEeeeeceEEEEeecCCCCCeeEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA----ALSITHVDQYNSMLVIDSVSARHSGNYS 83 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 83 (243)
.||.+...+.+..+.+|+.+.|.|.+. +.+ +.+.|++++..+.... ++.+... .....|.|.+++.+|+|.|+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~ 83 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVS-EEG-AQVMWMKNGVELTREDSFKARYRFKKD-GKRHILIFSDVVQEDRGRYQ 83 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEES-CSS-CCCEEEESSCBCCCSCCSSCCCEEEEC-SSEEEEECSSCCGGGCSBEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEe-CCC-CEEEEEECCEECCCCCCcceeEEEEEC-CCEEEEEECCCChhhCEEEE
Confidence 456777777788899999999999995 666 7999999999887655 4444432 23568999999999999999
Q ss_pred EEEEeCCCcceeEEEEEEEcCC
Q psy11132 84 CTVRNMVAEDTQVQRLIVNVPP 105 (243)
Q Consensus 84 C~~~~~~~~~~~~~~l~v~~~p 105 (243)
|.+.| ....+.|.|..+|
T Consensus 84 C~a~n----~~~~~~l~V~~~P 101 (101)
T 2edk_A 84 VITNG----GQCEAELIVEEKQ 101 (101)
T ss_dssp EECSS----CEECCBEEEECCC
T ss_pred EEEcC----CcEEEEEEEeCCC
Confidence 99976 3334556666543
No 358
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.56 E-value=3.5e-15 Score=92.47 Aligned_cols=82 Identities=27% Similarity=0.493 Sum_probs=65.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+...............+.|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 18 ~~v~~G~~v~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 96 (100)
T 3caf_A 18 HAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH 96 (100)
T ss_dssp EEECTTCCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEecCCCEEEEEEEc-cccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEE
Confidence 346789999999999 5889999999999998875433211112223467999999999999999999999999888877
Q ss_pred EEE
Q psy11132 195 LQV 197 (243)
Q Consensus 195 l~v 197 (243)
|.|
T Consensus 97 l~V 99 (100)
T 3caf_A 97 LDV 99 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 359
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=5.3e-16 Score=99.87 Aligned_cols=103 Identities=24% Similarity=0.350 Sum_probs=79.3
Q ss_pred eeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEecCCC--CCeeEEee---ccceeEEEE
Q psy11132 94 TQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSPR--FPVNVSDL---DSFSSLLSI 167 (243)
Q Consensus 94 ~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~~~~--~~~~~~~~---~~~~~~l~i 167 (243)
+..+.|.|..+|.+.. + ....+.+|+.+.|.|.+ .|.|.|. +.|++++..+... ..+..... ....+.|.|
T Consensus 4 ~~~~~l~V~~~P~i~~-~-~~~~~~~G~~v~l~C~~-~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I 80 (122)
T 2cry_A 4 GSSGTLTVNGPPIISS-T-QTQHALHGEKGQIKCFI-RSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTI 80 (122)
T ss_dssp SCCCCCCCCSSCCEEE-E-CCCCCCTTSCCCCCEEE-CCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEEC
T ss_pred ceEEEEEEecCCCccC-C-CeEEEecCCCEEEEEEE-eecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEE
Confidence 4456677778887766 3 33678899999999999 5888876 9999999887752 23333211 122568999
Q ss_pred eecCCCCC-eeEEEEEEccCcceeeeEEEEEEe
Q psy11132 168 NSVSAAHS-GEYTCVASNTAAQARYSSKLQVKG 199 (243)
Q Consensus 168 ~~~~~~d~-g~y~C~~~n~~g~~~~~~~l~v~~ 199 (243)
.++..+|. |.|+|.|.|..|.....+.|.|.+
T Consensus 81 ~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 81 SNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp TTCCHHHHHSCEEEEEECSSCEEEEEECCCCSC
T ss_pred cCCChhhCCceEEEEEECCCCeEEEEEEEEECC
Confidence 99999998 999999999999998888888874
No 360
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.55 E-value=4.6e-15 Score=92.88 Aligned_cols=82 Identities=28% Similarity=0.520 Sum_probs=69.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .|.|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 24 ~~v~~G~~v~L~C~~-~g~p~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 101 (106)
T 1nct_A 24 MTVYEGESARFSCDT-DGEPVPTVTWLRKGQVLSTSARHQVTT-TKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFT 101 (106)
T ss_dssp EEESSSSCEECCEEE-ECSSCCBCCBCSSSSCCTTCSSEEEEE-CSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEE
T ss_pred EEEeCCCcEEEEEEE-EEcCCCEEEEEECCEECCCCCCEEEEE-CCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEE
Confidence 456789999999999 589999999999998887665554433 334578999999999999999999999999888888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 102 l~V~ 105 (106)
T 1nct_A 102 LTIQ 105 (106)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8775
No 361
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.55 E-value=2.3e-15 Score=103.28 Aligned_cols=109 Identities=16% Similarity=0.263 Sum_probs=78.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCC-EEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.|..++ ..+
T Consensus 14 ~~v~~G~~v~L~C~~-~~~~~~~~i~W~~~~~~~~~~-----------~~~L~i~~v~~~d~G~Y~C~~~~~~~s--~~~ 79 (176)
T 1f2q_A 14 NRIFKGENVTLTCNG-NNFFEVSSTKWFHNGSLSEET-----------NSSLNIVNAKFEDSGEYKCQHQQVNES--EPV 79 (176)
T ss_dssp SEEETTCCEEEECCT-TCC----CCEEEETTEECSCC-----------SSEEEECSCCGGGCEEEEEECTTSSCC--CCE
T ss_pred cceecCCcEEEEEeC-CCCCCcceEEEEECCeECCCC-----------ceEEEEeccceecCEEEEEEcCCcccc--ccE
Confidence 467899999999998 566654 69999999987643 467999999999999999999986654 345
Q ss_pred EEEEEeec-CCCCCeeeeeccceeeeccCcc-cc--cccceEEeCCee
Q psy11132 194 KLQVKGNL-NRLPPSYTLVFSQASYMSTSYY-SF--EQDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~-~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~W~~~~~~~ 237 (243)
.+.|.... ...++...+..++.+.+.|... .. +.+.|+++|..+
T Consensus 80 ~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~ 127 (176)
T 1f2q_A 80 YLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEAL 127 (176)
T ss_dssp EEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEEC
T ss_pred EEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEE
Confidence 55555110 0012334556788889999773 23 489999998654
No 362
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.9e-14 Score=88.94 Aligned_cols=83 Identities=24% Similarity=0.382 Sum_probs=67.9
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCccee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQ 95 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 95 (243)
+....+.+|+.+.|.|.+. +.| +.+.|++++..+....++.+. ...|.|.+++..|+|.|+|.+.|..+....
T Consensus 10 p~~~~v~~G~~v~L~C~~~-g~p-p~i~W~k~g~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 82 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLR-DDV-QSINWLRDGVQLAESNRTRIT-----GEEVEVQDSVPADSGLYACVTSSPSGSDTT 82 (99)
T ss_dssp EEECCBCTTSCEEEECCCC-SSC-CEEEEEESSSBCCCCSSEEEC-----SSEEEETTCCTTTCEEEEEEEEETTEEEEE
T ss_pred CcCeEEeCCCcEEEEEEec-CCC-CeEEEEECCEECCCCCcEEEE-----CCEEEEccCCHHHCEEEEEEEEeCCceEEE
Confidence 4566789999999999985 555 599999999888766555433 468999999999999999999999888777
Q ss_pred EEEEEEEcCC
Q psy11132 96 VQRLIVNVPP 105 (243)
Q Consensus 96 ~~~l~v~~~p 105 (243)
.+.|.|...+
T Consensus 83 ~~~l~V~~~~ 92 (99)
T 2cr3_A 83 YFSVNVSDAL 92 (99)
T ss_dssp EEEECBCSCC
T ss_pred EEEEEEecCC
Confidence 7777776544
No 363
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.55 E-value=2e-14 Score=100.88 Aligned_cols=110 Identities=14% Similarity=0.218 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.|.+. +.|++++..+... ...|.|.+++.+|+|.|+|.+.|. .....+
T Consensus 17 ~~v~~G~~v~L~C~~-~~~p~~~~v~W~k~g~~l~~~-----------~~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~ 82 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQG-AYSPEDQSTQWFHNESLISSQ-----------ASSYFIDAATVDDSGEYRCQTQLS--TLSDPV 82 (204)
T ss_dssp SEEETTCCEEEEEEC-CSSSSCCCEEEEETTEEESCC-----------SSEEEESSCCGGGCEEEEEEETTS--BCCCCE
T ss_pred eEEECCCCEEEEEcC-CCCCCCcEEEEEECCEEcccC-----------ccEEEEecccccCCEEEEEEeCCC--cccccE
Confidence 457789999999999 5766554 9999999987654 267999999999999999999884 344456
Q ss_pred EEEEEeec-CCCCCeeeeeccceeeeccCcccc---cccceEEeCCeeE
Q psy11132 194 KLQVKGNL-NRLPPSYTLVFSQASYMSTSYYSF---EQDSWMIDNENYV 238 (243)
Q Consensus 194 ~l~v~~~~-~~~~p~~~~~~~~~~~~~~~~~~~---~~~~W~~~~~~~~ 238 (243)
.|.|...+ ...+|...+..++.+.+.|..... +.+.|+++|..+.
T Consensus 83 ~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~ 131 (204)
T 3sgj_C 83 QLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131 (204)
T ss_dssp EEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred EEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEee
Confidence 66666211 012233456678888999987443 4799999997653
No 364
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=1.8e-14 Score=89.15 Aligned_cols=82 Identities=18% Similarity=0.327 Sum_probs=66.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC--CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF--PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ..... .....+.|.|.++..+|+|.|+|.|.|..|.....
T Consensus 15 ~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 92 (100)
T 3irg_A 15 ISIDEGKVLTVACAF-TGEPTPEVTWSCGGRKIHSQEQGRFHIE-NTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp EEEETTSEEEEEEEE-EEESCCEEEEEETTEECCTTGGGTEEEE-ECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred EEEcCCCcEEEEEEE-EEcCCCceEEEECCEEeecCCCCEEEEE-ecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEE
Confidence 456789999999999 588999999999999886432 22222 22335789999999999999999999999998888
Q ss_pred EEEEEE
Q psy11132 193 SKLQVK 198 (243)
Q Consensus 193 ~~l~v~ 198 (243)
+.|.|.
T Consensus 93 ~~l~V~ 98 (100)
T 3irg_A 93 VNIHIR 98 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888876
No 365
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.55 E-value=7.2e-15 Score=101.70 Aligned_cols=106 Identities=14% Similarity=0.265 Sum_probs=78.0
Q ss_pred CCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEee-cCCCCCeeEEEEEEccCcceeeeEEEE
Q psy11132 118 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINS-VSAAHSGEYTCVASNTAAQARYSSKLQ 196 (243)
Q Consensus 118 ~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~~l~ 196 (243)
..|+.+.|.|.+ .+ ++ .+.|+++|..+.... ...|.|.+ +..+|+|.|+|.|.|..|.....+.+.
T Consensus 12 ~~G~~v~L~C~~-~~-~~-~i~W~k~g~~l~~~~----------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 12 ISGTSVELTCPL-DS-DE-NLKWEKNGQELPQKH----------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EETTEEEEECSS-CC-CT-TCEEEETTEEECSCC----------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred eCCcEEEEEEeC-CC-CC-ceEEEECCEECCCCC----------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 569999999998 45 43 499999999887541 34699999 999999999999999988855555554
Q ss_pred EEeecCCC-------------CC-----------ee---eeeccceeeeccCcccccccceEEeCCee
Q psy11132 197 VKGNLNRL-------------PP-----------SY---TLVFSQASYMSTSYYSFEQDSWMIDNENY 237 (243)
Q Consensus 197 v~~~~~~~-------------~p-----------~~---~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 237 (243)
|....... +| .. .+..++.+.+.|.. .-+.+.|++||..+
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-p~p~i~W~k~g~~i 145 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-TDKTIKWLKDGSII 145 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-SCSCEEEEETTEEC
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC-CCCeEEEEECCEEC
Confidence 43221100 00 01 12367889999998 66799999999765
No 366
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=7.1e-14 Score=87.57 Aligned_cols=92 Identities=14% Similarity=0.180 Sum_probs=72.0
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCC----------ceEEEEeeeeceEEEEeecCCC
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSA----------ALSITHVDQYNSMLVIDSVSAR 77 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~----------~~~~~~~~~~~~~l~i~~~~~~ 77 (243)
.+|.+.....+..+.+|+++.|.|.+. + .+.+.|++||.++.... ++.+... ...++|.|.+++.+
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs-~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~-g~~~~L~I~~v~~~ 82 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLS-T--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK-GLQHRLILHAVKHQ 82 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEES-S--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCB-TTEEEEEEESCCST
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEEC-C--CCeEEEEECCEECccCcccccccccccEEEEEeC-CcEEEEEECCCCHH
Confidence 346787778899999999999999995 4 55899999999998776 5555432 22468999999999
Q ss_pred CCeeEEEEEEeCCCcceeEEEEEEEcCCC
Q psy11132 78 HSGNYSCTVRNMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~ 106 (243)
|+|.|+|..-+ ....++.|.|..+|.
T Consensus 83 D~G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 83 DSGALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp TCSEEEEEEET---TEEEEEEEEEECSSC
T ss_pred HCccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 99999875543 334578899987664
No 367
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.55 E-value=6.4e-14 Score=98.92 Aligned_cols=120 Identities=18% Similarity=0.279 Sum_probs=85.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeC--CEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKD--GKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++. +.... ...++.... ......|.|.+++.+|+|.|.|
T Consensus 10 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 87 (213)
T 3mj8_L 10 VSVALGQKATITCSG-DKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SGNMATLTISKAQAGDEADYYC 87 (213)
T ss_dssp EEEETTSCEEEEEEC-SSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEEE
T ss_pred EEEeCCCCEEEEEEc-CCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cCCEEEEEECCCChhhCEEEEE
Confidence 456789999999999 5889999999982 21110 111222222 3346789999999999999999
Q ss_pred EEEccCc---ceeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc--c--ccceEEeCCee
Q psy11132 181 VASNTAA---QARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF--E--QDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g---~~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~--~--~~~W~~~~~~~ 237 (243)
.|.|..+ .....+.|.|..... .+|.+.+.+ ++.+.+.|..... + .+.|+++|..+
T Consensus 88 ~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 157 (213)
T 3mj8_L 88 QSWDGTNSAWVFGSGTKVTVLGQPN-AAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPI 157 (213)
T ss_dssp EEEETTTTEEEEBCCEEEEEECSCC-BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred EeccCCcceeEEcCceEEEEeCCCC-CCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCccc
Confidence 9999887 345567777764322 566665543 7788899987764 2 89999998865
No 368
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.55 E-value=3.7e-14 Score=86.93 Aligned_cols=83 Identities=25% Similarity=0.400 Sum_probs=68.1
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCccee
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQ 95 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 95 (243)
+....+.+|+.+.|.|.+. + .+.+.|++++..+....+.... ...|.|.+++.+|+|.|+|.+.|..+....
T Consensus 8 p~~~~v~~G~~~~l~C~~~-~--~p~v~W~k~g~~~~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 79 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLK-D--AAVISWTKDGVHLGPNNRTVLI-----GEYLQIKGATPRDSGLYACTAARTVDSETW 79 (95)
T ss_dssp CEEEEECTTSCEEEECCCC-T--TCEEEEEETTEEECCCSSEEEE-----TTEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCcEEECCCCEEEEEEEeC-C--CCEEEEEECCEECCCCceEEEe-----CCEEEECcCCcccCEEEEEEEccCCCcEEE
Confidence 4556788999999999985 4 4599999999998776665443 568999999999999999999999998888
Q ss_pred EEEEEEEcCCC
Q psy11132 96 VQRLIVNVPPK 106 (243)
Q Consensus 96 ~~~l~v~~~p~ 106 (243)
.+.|.|..++.
T Consensus 80 ~~~l~V~~~~~ 90 (95)
T 4hwu_A 80 IFMVNVTDAAE 90 (95)
T ss_dssp EEEEEECCC--
T ss_pred EEEEEEeCCcc
Confidence 88888876543
No 369
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.55 E-value=1.3e-14 Score=106.30 Aligned_cols=155 Identities=15% Similarity=0.182 Sum_probs=80.8
Q ss_pred cCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCC--EecC---
Q psy11132 74 VSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPLS--- 148 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~~--- 148 (243)
.++.|.+.|.|.+.+..+.......+.|..+|. ...+.+|+++.|.|.+ .+ +.+.+.|++.. ....
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~~~p~-------~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~ 73 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVIQTPR-------YLVKGQGQKAKMRCIP-EK-GHPVVFWYQQNKNNEFKFLI 73 (270)
T ss_dssp -------------------------CCCEEECS-------EEEEETTSCEEEEEEC-CT-TCCEEEEEEECTTCCEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeEEeCCC-------eEEEcCCCCEEEEEEe-cC-CCceEEEEEECCCCCcEEEE
Confidence 357889999999988766544333333333222 1346789999999998 34 67899999822 1100
Q ss_pred ---CCC----------CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCc----ceeeeEEEEEEeec-CCCCCeeee
Q psy11132 149 ---PRF----------PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA----QARYSSKLQVKGNL-NRLPPSYTL 210 (243)
Q Consensus 149 ---~~~----------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g----~~~~~~~l~v~~~~-~~~~p~~~~ 210 (243)
... +............|.|.+++.+|+|.|.|.+.+..+ .......+.|...+ ...+|.+.+
T Consensus 74 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~ 153 (270)
T 3qib_D 74 NFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAV 153 (270)
T ss_dssp EEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEE
T ss_pred EECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEE
Confidence 000 111111123357899999999999999999997432 22344567776422 223565544
Q ss_pred e--------ccceeeeccCccc-cc---ccceEEeCCee
Q psy11132 211 V--------FSQASYMSTSYYS-FE---QDSWMIDNENY 237 (243)
Q Consensus 211 ~--------~~~~~~~~~~~~~-~~---~~~W~~~~~~~ 237 (243)
. .+..+.+.|.... .| .+.|++||+.+
T Consensus 154 ~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l 192 (270)
T 3qib_D 154 FEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 192 (270)
T ss_dssp EECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred ECCCccccccCCceEEEEEecceeCCCeEEEEEECCEEC
Confidence 2 2678889998766 33 78999998765
No 370
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.55 E-value=2e-14 Score=100.67 Aligned_cols=120 Identities=14% Similarity=0.133 Sum_probs=84.9
Q ss_pred CCCCCCCcEEEEEEeecCCCC-----CEEEEEe-CCEecCCCCCeeEEee--ccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 115 DGLPEGARTRVICGVTHGDPP-----LTIRWLK-DGKPLSPRFPVNVSDL--DSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~-----~~~~W~~-~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
..+.+|+.+.|.|.+ .+.|. +.+.|++ ++.......+...... ......|.|.+++.+|+|.|+|.|.|..
T Consensus 12 v~v~~G~~v~L~C~~-~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 90 (202)
T 3bp6_B 12 YTVDVGSSVSLECDF-DRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGA 90 (202)
T ss_dssp EEEETTSCEEEEEEE-CTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEeCCCcEEEEEEe-cCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCC
Confidence 345789999999999 57765 8999999 4443333333222211 1135789999999999999999999999
Q ss_pred cceeeeEEEEEEeecCCCCCeeee---eccceeeeccCcccc--cccceEEeCCee
Q psy11132 187 AQARYSSKLQVKGNLNRLPPSYTL---VFSQASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 187 g~~~~~~~l~v~~~~~~~~p~~~~---~~~~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
+.....+.|.|.... ..|.+.+ ..+..+.+.|...+. +.+.|++++..+
T Consensus 91 ~~~~~~~~l~V~~~~--~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 91 AWDYKYLTVKVKASY--MRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp EEEEEEEEEEEEBCC--CCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCC
T ss_pred CcceEEEEEEecCCC--CcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCc
Confidence 888788888887432 3344433 457788899987655 489999987654
No 371
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.54 E-value=3.5e-14 Score=99.04 Aligned_cols=108 Identities=17% Similarity=0.246 Sum_probs=81.5
Q ss_pred CCCCCCcEEEEEEeecCCCCC--EEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 116 GLPEGARTRVICGVTHGDPPL--TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
.+..|+++.|.|.+ +.|.+ .+.|++.+..+. .. ........|.|.+++.+|+|.|.|.|.|..+.....+
T Consensus 18 ~v~~G~sv~L~C~a--~~p~P~~~i~W~~~~~~l~---~~---~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 18 AVALGASRQLTCRL--ACADRGASVQWRGLDTSLG---AV---QSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEETTCCEEEEEEE--CCSSTTCEEEEESSTTTTC---CE---EEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEC--CCCCCCcceEEeecccccC---cE---EecCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 56789999999998 55656 999998654431 11 1123357899999999999999999999988888889
Q ss_pred EEEEEeecCCCCCeeee-e-----ccceeeeccCcccc-c------ccceEEeCCee
Q psy11132 194 KLQVKGNLNRLPPSYTL-V-----FSQASYMSTSYYSF-E------QDSWMIDNENY 237 (243)
Q Consensus 194 ~l~v~~~~~~~~p~~~~-~-----~~~~~~~~~~~~~~-~------~~~W~~~~~~~ 237 (243)
.|.|. .+|.... . +++.. ++|.+... | .|.|+|||+.+
T Consensus 90 ~ltV~-----~~P~~~~i~~~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L 140 (210)
T 1gsm_A 90 QLLVY-----AFPNQLTVSPAALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQEL 140 (210)
T ss_dssp EEEEE-----BCCSEEEEESSSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEEC
T ss_pred EEEEE-----ecCCCcEEccceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEc
Confidence 99998 4554322 2 45566 99987654 3 69999999876
No 372
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.54 E-value=7.9e-14 Score=97.72 Aligned_cols=115 Identities=15% Similarity=0.174 Sum_probs=82.2
Q ss_pred CCCCcEEEEEEeecCCCCCEEEEEeCCE-ecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEE
Q psy11132 118 PEGARTRVICGVTHGDPPLTIRWLKDGK-PLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 196 (243)
Q Consensus 118 ~~g~~~~l~C~~~~~~p~~~~~W~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~ 196 (243)
.+|+.+.|.|.+ .|.|.+.+.|+++.. .+. ... ........|.|.+++.+|+|.|.|.|.|..|.....+.|.
T Consensus 14 ~~G~~v~L~C~~-~g~P~p~i~W~~~~~~~~~---~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~ 87 (202)
T 1vca_A 14 QIGDSVSLTCST-TGCESPFFSWRTQIDSPLN---GKV--TNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE 87 (202)
T ss_dssp ETTSCEEEEEEE-ESCSSCEEEEEETTCCCCS---SEE--EEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCcEEEEEee-cCCCCCeEEEECCCCCCcc---ceE--EEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEE
Confidence 479999999999 588999999998432 111 111 1122346799999999999999999999988877788888
Q ss_pred EEeecCC--CCCeeeeeccceeeeccCcccc-c----ccceEEeCCeeE
Q psy11132 197 VKGNLNR--LPPSYTLVFSQASYMSTSYYSF-E----QDSWMIDNENYV 238 (243)
Q Consensus 197 v~~~~~~--~~p~~~~~~~~~~~~~~~~~~~-~----~~~W~~~~~~~~ 238 (243)
|...+.. .++...+..++.+.+.|..... + .+.|+++|..+.
T Consensus 88 V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 88 IYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp EEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred EEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 8732210 0111235567888899987653 2 689999997653
No 373
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.54 E-value=1.1e-14 Score=102.78 Aligned_cols=122 Identities=20% Similarity=0.256 Sum_probs=85.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC----eeEEeeccce--eEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP----VNVSDLDSFS--SLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~----~~~~~~~~~~--~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... .......+.. ..+.|.++..+|+|.|+|.|.|..|.
T Consensus 19 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 97 (212)
T 2v9r_A 19 LIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE 97 (212)
T ss_dssp EEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEE
T ss_pred eEEeCCCcEEEEEEc-CCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCc
Confidence 456789999999999 5888899999999988764321 1111111111 12445667899999999999999886
Q ss_pred e-eeeEEEEEEeecC---CCCCeeeeeccceeeeccCc-ccc--cccceEEeCCee
Q psy11132 189 A-RYSSKLQVKGNLN---RLPPSYTLVFSQASYMSTSY-YSF--EQDSWMIDNENY 237 (243)
Q Consensus 189 ~-~~~~~l~v~~~~~---~~~p~~~~~~~~~~~~~~~~-~~~--~~~~W~~~~~~~ 237 (243)
. ...+.+.|...+. ..+....+..++.+.+.|.. ... +.+.|+++|..+
T Consensus 98 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l 153 (212)
T 2v9r_A 98 AVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPL 153 (212)
T ss_dssp EECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEE
T ss_pred eeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccC
Confidence 5 4566676654321 22344567778889999976 444 489999998654
No 374
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.54 E-value=2.5e-16 Score=119.72 Aligned_cols=147 Identities=18% Similarity=0.173 Sum_probs=102.5
Q ss_pred CCeeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEe
Q psy11132 78 HSGNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD 157 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~ 157 (243)
+.|.|+|.+.+..... .+.+..+|.+...+ ....+.+|+.+.|.|.+ .|.|.+.+.|++++..+...... .
T Consensus 136 ~~~~~~C~~~~~l~~l----~~~~c~~P~i~~~~-~~~~v~~G~~v~L~C~~-~g~p~p~i~W~~~~~~~~~~~~~---~ 206 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHM----PNASCGVPTLKVQV-PNASVDVGDDVLLRCQV-EGRGLEQAGWILTELEQSATVMK---S 206 (347)
T ss_dssp GGGCCCCSSSSCSSCC----CCTTCCCCEEEEEC-CSSCCBTTCCEEEEEEE-ECSSCCCCCEEESCCCSSEEECC---C
T ss_pred cccCCCCCCChHHhcC----CcccCCCCceeccC-CceEEeCCCcEEEEEEE-ecCCCCEEEEEcCCceeeccccc---c
Confidence 4688999776522211 11222344444333 33677899999999999 68999999999998764422111 1
Q ss_pred eccceeEEEEeecCCCCCe-eEEEEEEccCcceeeeEEEEEEeecCCCCCee---eeeccceeeeccCccccc--ccceE
Q psy11132 158 LDSFSSLLSINSVSAAHSG-EYTCVASNTAAQARYSSKLQVKGNLNRLPPSY---TLVFSQASYMSTSYYSFE--QDSWM 231 (243)
Q Consensus 158 ~~~~~~~l~i~~~~~~d~g-~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~--~~~W~ 231 (243)
.....+.|.|.++..+|+| .|+|.|.|..|.....+.+.|. .||.+ ....+..+.+.|...+.| .++|+
T Consensus 207 ~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~-----~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~ 281 (347)
T 2ifg_A 207 GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS-----FPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWL 281 (347)
T ss_dssp CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCB-----EEEEEEECCCEESSSEEEEEEEEEESCCEEEEE
T ss_pred eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEc-----CCCeeeeccCccCceEEEEEEeeecCCCcEEEE
Confidence 1233578999999999999 9999999999988887777776 45543 223467788899876654 89999
Q ss_pred EeCCeeE
Q psy11132 232 IDNENYV 238 (243)
Q Consensus 232 ~~~~~~~ 238 (243)
++|..+.
T Consensus 282 ~~g~~l~ 288 (347)
T 2ifg_A 282 FNGSVLN 288 (347)
T ss_dssp ETTEECC
T ss_pred eCCEECC
Confidence 9986543
No 375
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=1.5e-13 Score=87.63 Aligned_cols=84 Identities=17% Similarity=0.280 Sum_probs=63.8
Q ss_pred CCCCCCCcEEEEEEeecCC---CCCEEEEEeCCEec-C--CCCCeeEEe-ec----cceeEEEEeecCCCCCeeEEEEEE
Q psy11132 115 DGLPEGARTRVICGVTHGD---PPLTIRWLKDGKPL-S--PRFPVNVSD-LD----SFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~---p~~~~~W~~~~~~~-~--~~~~~~~~~-~~----~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
..+.+|+.+.|.|.+. +. |.|.+.|||+.... . ......+.. .. .....|.|.++..+|+|.|+|.|.
T Consensus 17 v~V~eG~~v~L~C~v~-g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevs 95 (126)
T 2dav_A 17 GTVKVGEDITFIAKVK-AEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVT 95 (126)
T ss_dssp CEEETTCCEEEEEEEE-CCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEE
T ss_pred eEEeCCCCEEEEEEEe-ccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEE
Confidence 5678999999999994 53 88999999974211 1 112222221 11 125789999999999999999999
Q ss_pred ccCcceeeeEEEEEEe
Q psy11132 184 NTAAQARYSSKLQVKG 199 (243)
Q Consensus 184 n~~g~~~~~~~l~v~~ 199 (243)
|..|..+..++|.|..
T Consensus 96 n~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 96 YKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CSSCEEEECCEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999999999999994
No 376
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.53 E-value=8.5e-15 Score=100.31 Aligned_cols=110 Identities=14% Similarity=0.234 Sum_probs=80.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCE-EEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.|.+. +.|++++..+... ...|.|.+++.+|+|.|+|.+.|..+ ...+
T Consensus 17 ~~v~~G~~v~L~C~~-~~~p~~~~~~W~~~~~~~~~~-----------~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~ 82 (175)
T 1fnl_A 17 YSVLEKDSVTLKCQG-AYSPEDNSTQWFHNESLISSQ-----------ASSYFIDAATVNDSGEYRCQTNLSTL--SDPV 82 (175)
T ss_dssp SEEETTCCEEEEEEC-CCBTTBCCCEEEETTEEEESS-----------CSEEEESSCCGGGCEEEEEECSSSCC--CCCE
T ss_pred eeeeCCCcEEEEeeC-CCCCCCcceEEEECCEEccCC-----------ceEEEEeCCCcccCEEEEEEeeCCcc--cccE
Confidence 357789999999999 5666555 8999999877532 46799999999999999999998554 4455
Q ss_pred EEEEEeec-CCCCCeeeeeccceeeeccCcccc---cccceEEeCCeeE
Q psy11132 194 KLQVKGNL-NRLPPSYTLVFSQASYMSTSYYSF---EQDSWMIDNENYV 238 (243)
Q Consensus 194 ~l~v~~~~-~~~~p~~~~~~~~~~~~~~~~~~~---~~~~W~~~~~~~~ 238 (243)
.+.|.... ...++...+..++.+.+.|..... +.+.|+++|..+.
T Consensus 83 ~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~ 131 (175)
T 1fnl_A 83 QLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK 131 (175)
T ss_dssp EEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE
T ss_pred EEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc
Confidence 66665211 011233456678888899976533 3899999997653
No 377
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.53 E-value=2e-14 Score=101.27 Aligned_cols=117 Identities=21% Similarity=0.282 Sum_probs=82.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVA 182 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 182 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ...+.... ...|.|.+++.+|+|.|+|.|
T Consensus 11 ~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~L~i~~v~~~D~G~Y~C~~ 84 (212)
T 1f97_A 11 VQVPENESIKLTCTY-SGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-----SSGITFSSVTRKDNGEYTCMV 84 (212)
T ss_dssp EEEETTCCEEEECEE-ESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-----TTEEEESCCCGGGCEEEEEEE
T ss_pred eEEEcCCCEEEEeEe-CCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-----ceeEEEcccCcccCeEEEEEE
Confidence 446789999999999 588999999999775521 11111111 267999999999999999999
Q ss_pred EccCc--ceeeeEEEEEEeecCC--CCCeeeeeccceeeeccC-cccc--cccceEEeCC-ee
Q psy11132 183 SNTAA--QARYSSKLQVKGNLNR--LPPSYTLVFSQASYMSTS-YYSF--EQDSWMIDNE-NY 237 (243)
Q Consensus 183 ~n~~g--~~~~~~~l~v~~~~~~--~~p~~~~~~~~~~~~~~~-~~~~--~~~~W~~~~~-~~ 237 (243)
.|..| .....+.|.|...+.. .+....+..++.+.+.|. .... +.+.|++++. .+
T Consensus 85 ~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l 147 (212)
T 1f97_A 85 SEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISML 147 (212)
T ss_dssp EETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESB
T ss_pred EccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccc
Confidence 99877 4456677777632210 011124556778889998 4544 4899999998 54
No 378
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.53 E-value=2.1e-14 Score=101.80 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=78.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeecccee--EEEEeecCCCCCeeEEEEEEccCcce--e
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSS--LLSINSVSAAHSGEYTCVASNTAAQA--R 190 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~n~~g~~--~ 190 (243)
..+.+|++++|.|.+ .+ +.+.+.|+|+|..+....... ....... .|.|.+++.+|+|.|+|.|.|..|.. +
T Consensus 18 ~~v~~G~~vtL~C~~-~~-~~~~~~W~k~g~~~~~~~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s 93 (218)
T 1uct_A 18 PVIPLDGSVKIQCQA-IR-EAYLTQLMIIKNSTYREIGRR--LKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYS 93 (218)
T ss_dssp SEEETTCCEEEEECC-CT-TCSEEEEEEEETTEEEECSEE--CC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEEC
T ss_pred CccCCCCCEEEEEEc-CC-CCCEEEEEECCCccccccccc--CCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeec
Confidence 356789999999998 45 678999999886553211100 0011134 89999999999999999999987643 3
Q ss_pred eeEEEEEEeecCCCCCee------eeeccceeeeccCccc--ccccceEEeCCee
Q psy11132 191 YSSKLQVKGNLNRLPPSY------TLVFSQASYMSTSYYS--FEQDSWMIDNENY 237 (243)
Q Consensus 191 ~~~~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~--~~~~~W~~~~~~~ 237 (243)
..+.|.|.+.. .+|.+ .+..++.+.+.|.... .+.+.|+|+|..+
T Consensus 94 ~~~~l~V~~~~--~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~ 146 (218)
T 1uct_A 94 DTLELVVTGLY--GKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELS 146 (218)
T ss_dssp CCEEEEEECSS--CCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSS
T ss_pred CCEEEEEcCcc--cCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcc
Confidence 44667766422 23333 4456778888993332 3479999998654
No 379
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=2.6e-15 Score=95.52 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=64.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+.......+.........|.|.++..+|+|.|+|. .|.....+.
T Consensus 23 ~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~ 97 (115)
T 2cr6_A 23 VDVQEGSSATFRCRI-SPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE----AGDQRASAA 97 (115)
T ss_dssp EEEETTSCEECCCEE-ESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE----ETTEECCEE
T ss_pred EEEeCCCcEEEEEEE-cCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE----ECCeeEEEE
Confidence 567899999999999 588989999999999887765544432334456799999999999999999 366777788
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 98 L~V~ 101 (115)
T 2cr6_A 98 LRVT 101 (115)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 380
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.53 E-value=7.7e-14 Score=89.90 Aligned_cols=93 Identities=17% Similarity=0.275 Sum_probs=69.7
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeec--------CCCceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 14 PTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLD--------NSAALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
..+....+.+|++++|.|.+. +.+.+.+.|++++..+. ...++..........+|.|.+++.+|+|.|+|.
T Consensus 6 ~~~~~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 84 (124)
T 3rbg_A 6 NHTETITVEEGQTLTLKCVTS-LRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL 84 (124)
T ss_dssp CSEEEEEEETTSCEEEEEECC-CCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCccEEEcCCCCEEEEeEEe-ccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEE
Confidence 345567789999999999995 77778999998665321 334444443333357899999999999999999
Q ss_pred EEeCCCcceeEEEEEEEcCCCcc
Q psy11132 86 VRNMVAEDTQVQRLIVNVPPKIE 108 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~~~p~~~ 108 (243)
+.+. +.....+.|.|..+|...
T Consensus 85 a~n~-g~~~~~~~l~V~~~P~~~ 106 (124)
T 3rbg_A 85 HYSD-SVSTKEVKVIVLATMKGE 106 (124)
T ss_dssp EESS-SEEEEEEEEEEECC----
T ss_pred EEcC-CCCcEEEEEEEEeCCCCC
Confidence 9998 878888899998877644
No 381
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.53 E-value=4.8e-14 Score=86.96 Aligned_cols=88 Identities=25% Similarity=0.419 Sum_probs=66.5
Q ss_pred CCCccCC-CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 9 PPKLSPT-NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 9 ~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
||.+... +....+.+|+.+.|.|.+..+.|.+.+.|++++......... .....|.|.+++.+|+|.|+|.+.
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~------~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAM------DFNGILTIRNVQPSDAGTYVCTGS 82 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEE------EETTEEEECSCCGGGCEEEEEEEE
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceee------cCCCEEEEeCCChhhCEEEEEEec
Confidence 3444433 455678999999999999646788899999986443332211 125689999999999999999999
Q ss_pred eCCCcceeEEEEEEE
Q psy11132 88 NMVAEDTQVQRLIVN 102 (243)
Q Consensus 88 ~~~~~~~~~~~l~v~ 102 (243)
|..+.....+.|.|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 83 NMFAMDQGTATLHVQ 97 (98)
T ss_dssp CSSCEEEEEEEEEEC
T ss_pred CCCCccccEEEEEEe
Confidence 999988777777764
No 382
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=1.2e-13 Score=85.90 Aligned_cols=88 Identities=19% Similarity=0.347 Sum_probs=65.7
Q ss_pred cCCCccCCCCC-cccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC-CceEEEEeeeeceEEEEeecCCCCCeeEEEE
Q psy11132 8 VPPKLSPTNPE-RTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS-AALSITHVDQYNSMLVIDSVSARHSGNYSCT 85 (243)
Q Consensus 8 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 85 (243)
.+|.|.....+ ..+.+|+.+.|.|.+ +.|.+.+.|+++|..+... .++.+...+ ....|.|.+++.+|+|.|+|.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~--~~p~~~v~W~k~g~~l~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~ 90 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL--ADHDAEVKWLKNGQEIQMSGSKYIFESIG-AKRTLTISQCSLADDAAYQCV 90 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC--SSSSSCCEEEESSSEECCCSSSSEEEEET-TEEEEEECSCSSSSCEEEEEE
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE--cCCCCEEEEEECCEECCCCCCeEEEEecC-CEEEEEECCCCcccCEEEEEE
Confidence 45666655555 779999999999998 4677789999999998776 565554322 245899999999999999999
Q ss_pred EEeCCCcceeEEEEEEE
Q psy11132 86 VRNMVAEDTQVQRLIVN 102 (243)
Q Consensus 86 ~~~~~~~~~~~~~l~v~ 102 (243)
+. .......|.|.
T Consensus 91 a~----~~~~~~~l~V~ 103 (104)
T 1pd6_A 91 VG----GEKCSTELFVK 103 (104)
T ss_dssp ET----TEEECCEEEEE
T ss_pred EC----CCcEEEEEEEe
Confidence 93 23334445543
No 383
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.52 E-value=6.4e-14 Score=90.04 Aligned_cols=93 Identities=18% Similarity=0.302 Sum_probs=67.4
Q ss_pred CcccccCCeEEEEEEeeCC--CCCceeEEEECCeeecC-----CCceEEEEe--eeeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 18 ERTLNVGERASLICSITKG--DIPLTIKWLKDGRYLDN-----SAALSITHV--DQYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~--~~~~~v~W~~~~~~~~~-----~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
.+.+.+|+.+.|.|.+. + .+.+.+.|++++..+.. ......... ....+.|.|.+++.+|+|.|+|.+.|
T Consensus 17 ~v~v~~G~~v~L~C~~~-g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 95 (122)
T 3s35_X 17 GIELSVGEKLVLNCTAR-TELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 95 (122)
T ss_dssp CEEEEETCCEEEEEEEE-ECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CEEEecCCeEEEEEEEE-cCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEcc
Confidence 34688999999999996 4 44568999998874421 111111110 12356899999999999999999999
Q ss_pred CCCcceeEEEEEEEcCCCccccc
Q psy11132 89 MVAEDTQVQRLIVNVPPKIESFA 111 (243)
Q Consensus 89 ~~~~~~~~~~l~v~~~p~~~~~~ 111 (243)
..+.....+.|.|..+|.+...+
T Consensus 96 ~~g~~~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 96 GLMTKKNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp SSCEEEEEEEEEEEEEECC----
T ss_pred CCCceEEEEEEEEeccCeEEeec
Confidence 99988889999999888765443
No 384
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=100.22 Aligned_cols=120 Identities=16% Similarity=0.200 Sum_probs=79.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee--ee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR--YS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~--~~ 192 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+........... ..+.|.|.++..+|+|.|+|.+.|..+... ..
T Consensus 12 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 88 (189)
T 2v5t_A 12 QEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAML--ANNNLQILNINKSDEGIYRCEGRVEARGEIDFRD 88 (189)
T ss_dssp EEEETTSCEEECCEE-ECSSCCEEEEEC-----CBCCCTTEEEC--TTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCcEEEEEEE-cCCCCCEEEEEECCccceeccCCeEEEe--cCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEE
Confidence 456789999999999 5888999999999887764222111111 134699999999999999999999875433 34
Q ss_pred EEEEEEeec--CCCCC--eeeeeccceeeeccCccccc--ccceEEeCCee
Q psy11132 193 SKLQVKGNL--NRLPP--SYTLVFSQASYMSTSYYSFE--QDSWMIDNENY 237 (243)
Q Consensus 193 ~~l~v~~~~--~~~~p--~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~ 237 (243)
+.+.+...+ ...+. ...+..+..+.+.|.....+ .+.|+++|..+
T Consensus 89 ~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~ 139 (189)
T 2v5t_A 89 IIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLI 139 (189)
T ss_dssp EEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEEC
T ss_pred EEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEEC
Confidence 555555222 11111 23445678888999876554 89999998654
No 385
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.52 E-value=5.4e-14 Score=107.33 Aligned_cols=104 Identities=15% Similarity=0.198 Sum_probs=66.9
Q ss_pred CCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC----CceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCC
Q psy11132 16 NPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS----AALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVA 91 (243)
Q Consensus 16 ~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 91 (243)
+....+.+|+.+.|.|.+. + |.+.+.|++++..+... .++.+ ..++|.|.+++.+|+|.|+|.|.|..|
T Consensus 253 ~~~v~v~~G~~~~l~C~~~-g-p~p~i~W~~~~~~~~~~~~~~~r~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~~g 325 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTK-Q-QGMTKVWVSPSNEQVLSQGSNGSVSV-----RNGDLFFKKVQVEDGGVYTCYAMGETF 325 (361)
T ss_dssp CCCCEEETTCCEEECCCCS-S-TTCEEEEECTTSCBCCSCCSSSSEEE-----ETTEEEESSCCTTSCEEEEEEEECSSC
T ss_pred ccCceecCCCeEEEEeEee-C-CCCeEEEEeCCCeeEeecccCCceEe-----ecCeEEEeecCcccCEEEEEEEecCCC
Confidence 4466899999999999994 6 77899999977654332 13333 256799999999999999999999988
Q ss_pred cceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEE
Q psy11132 92 EDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIR 139 (243)
Q Consensus 92 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 139 (243)
..+..+.|.|...+ ..|..+.|.|.+ .|.|.|.+.
T Consensus 326 ~~~~~~~l~V~~~~------------~~g~~~~l~C~~-~g~P~P~i~ 360 (361)
T 2xot_A 326 NETLSVELKVYNFT------------LHGHHDTLNAAA-DPWSHPQFE 360 (361)
T ss_dssp EEEEEEEEEEESSC------------CC--------------------
T ss_pred ccEEEEEEEEEeee------------ccCCceEEEEEe-CCCCCCccc
Confidence 88888888885422 578899999999 688988763
No 386
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.52 E-value=1.2e-13 Score=84.07 Aligned_cols=77 Identities=21% Similarity=0.343 Sum_probs=61.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+ +++.+.|+++|..+.....+.+.. ++....|.|.++..+|+|.|+|.|.|. ..++.
T Consensus 15 ~~v~~G~~v~l~C~v-~~-~~~~v~W~k~g~~i~~~~~~~i~~-~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa~ 87 (93)
T 1waa_A 15 VEVFVGETAHFEIEL-SE-PDVHGQWKLKGQPLAASPDCEIIE-DGKKHILILHNCQLGMTGEVSFQAANT----KSAAN 87 (93)
T ss_dssp EEEETTSCEEEEEEE-SS-SSCCCEEEETTEECCCBTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEETTE----EEEEE
T ss_pred eEEeCCCCEEEEEEE-CC-CCCeEEEEECCEECcCCCCEEEEE-ECCEEEEEECCCChhhCEEEEEEECCC----cEEEE
Confidence 567899999999999 45 457899999999998766655443 344578999999999999999999884 45666
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 88 L~V~ 91 (93)
T 1waa_A 88 LKVK 91 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 387
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=87.53 Aligned_cols=98 Identities=23% Similarity=0.355 Sum_probs=72.8
Q ss_pred cceeEEEEEEEcCC-CccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeec
Q psy11132 92 EDTQVQRLIVNVPP-KIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV 170 (243)
Q Consensus 92 ~~~~~~~l~v~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 170 (243)
.....+.|.|...| .+... .....+.+|+++.|.|.+ .+. +.+.|++++..+.....+.... ++....|.|.++
T Consensus 6 ~~~~~~~l~V~~~pp~~~~~-~~~~~v~~G~~v~l~C~~-~~~--p~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v 80 (113)
T 2edh_A 6 SGRTSAMLTVRALPIKFTEG-LRNEEATEGATAVLRCEL-SKM--APVEWWKGHETLRDGDRHSLRQ-DGARCELQIRGL 80 (113)
T ss_dssp CCCCCCCCCCCCSCCCEEEC-CCCCEECTTSCEEEEEEE-SSC--CCCEEEESSSBCCCSSSEEEEE-ETTEEEEEECSC
T ss_pred CCcEEEEEEEEcCCCccccc-CCceEEeCCCeEEEEEEE-CCC--CcEEEEECCEECCCCCcEEEEE-CCCEEEEEECCC
Confidence 34445566776544 44332 333567899999999999 454 6899999999988766555443 333568999999
Q ss_pred CCCCCeeEEEEEEccCcceeeeEEEEEE
Q psy11132 171 SAAHSGEYTCVASNTAAQARYSSKLQVK 198 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g~~~~~~~l~v~ 198 (243)
..+|+|.|+|.| +.....+.|.|.
T Consensus 81 ~~~D~G~Y~C~a----~~~~~~~~l~V~ 104 (113)
T 2edh_A 81 VAEDAGEYLCMC----GKERTSAMLTVR 104 (113)
T ss_dssp CSTTCEEEEEEE----TTEEEEEEEEEC
T ss_pred ChhhCEEEEEEe----CCCCEEEEEEEe
Confidence 999999999999 667777888888
No 388
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.52 E-value=1.7e-13 Score=96.77 Aligned_cols=119 Identities=13% Similarity=0.206 Sum_probs=83.3
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--EecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+ .+.|.+.+.|+++. .... ...++... .......|.|.+++.+|+|.|.|
T Consensus 11 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3nl4_L 11 VSEPVGGTVTIKCQA-SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGS-GSGTDFTLTISDLECADAATYYC 88 (213)
T ss_dssp EEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEECSCCGGGCEEEEE
T ss_pred EEEcCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEe-cCCCEEEEEECCCChHHCEEEEE
Confidence 456789999999999 57789999999842 1110 01222222 23345689999999999999999
Q ss_pred EEEccCcc---eeeeEEEEEEeecCCCCCeeeee-------ccceeeeccCccc---ccccceEEeCCee
Q psy11132 181 VASNTAAQ---ARYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYS---FEQDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g~---~~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~---~~~~~W~~~~~~~ 237 (243)
.|.|..+. ......+.|.. ...+|.+.+. .++.+.+.|.... .+.+.|+++|..+
T Consensus 89 ~~~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~ 156 (213)
T 3nl4_L 89 QSTYENPTYVSFGGGTEVGVKG--DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQ 156 (213)
T ss_dssp EECCSSTTTCEECCCEEEEEEC--CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEEC
T ss_pred ecCCCCceeEEeCCCeEEEEeC--CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccC
Confidence 99998773 34455666653 2356665442 3678889998765 3489999998765
No 389
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.51 E-value=1.4e-13 Score=96.93 Aligned_cols=92 Identities=25% Similarity=0.421 Sum_probs=76.7
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCC
Q psy11132 12 LSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVA 91 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 91 (243)
+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.........|.|.+++.+|.|.|+|.+.|..|
T Consensus 120 ~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g 198 (212)
T 2r15_A 120 LGGLPDVVTIQEGKALNLTCNVW-GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYG 198 (212)
T ss_dssp EEBCCSEEEEETTCCEEEEEEEE-CSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cccCCCcEEEccCCeEEEEEEEc-CCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCC
Confidence 33345567789999999999995 88888999999999998877766655434457899999999999999999999999
Q ss_pred cceeEEEEEEEcC
Q psy11132 92 EDTQVQRLIVNVP 104 (243)
Q Consensus 92 ~~~~~~~l~v~~~ 104 (243)
.....+.|.|..|
T Consensus 199 ~~~~~~~l~V~~P 211 (212)
T 2r15_A 199 SETSDFTVSVFIP 211 (212)
T ss_dssp EEEEEEEEEEECC
T ss_pred cEEEEEEEEEEcc
Confidence 8888888888743
No 390
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.51 E-value=2.7e-13 Score=89.82 Aligned_cols=96 Identities=18% Similarity=0.332 Sum_probs=72.3
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEE---------CCeeecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLK---------DGRYLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~---------~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
++.+...+....+.+|++++|.|.+. +.+.+.+.|++ ++..+ ...++..........+|.|.+++.+|+
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~-~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~~~~~~~L~I~~v~~~Ds 115 (145)
T 1z9m_A 38 QDDSQPWTSDETVVAGGTVVLKCQVK-DHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTSTPHELSISISNVALADE 115 (145)
T ss_dssp CCTTCCBCCCEEEETTSCEEEEEECS-CCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEECSSEEEEEECSCCGGGC
T ss_pred ccceecCCceEEEEcCCCEEEEEEEc-CCCCcEEEEECCCCcEEEECCceec-ccCCEEEecCCCCeEEEEECCCChhhC
Confidence 34445557778899999999999995 66677999994 33322 234444443333467899999999999
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEcCCCc
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
|.|+|.+.+. +.....+.|.|..+|..
T Consensus 116 G~Y~C~~~n~-~~~~~~~~L~V~~~P~~ 142 (145)
T 1z9m_A 116 GEYTCSIFTM-PVRTAKSLVTVLGIPQK 142 (145)
T ss_dssp EEEEEEECSS-SCEEEEEEEEEECCCC-
T ss_pred EEEEEEEEcC-CCceEEEEEEEEeCCCC
Confidence 9999999998 87888889999887754
No 391
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.51 E-value=2.8e-14 Score=91.70 Aligned_cols=92 Identities=22% Similarity=0.286 Sum_probs=65.0
Q ss_pred CCCCCCcEEEEEEeecC--CCCCEEEEEeCCEecCC-----CCCeeEEee--ccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 116 GLPEGARTRVICGVTHG--DPPLTIRWLKDGKPLSP-----RFPVNVSDL--DSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~--~p~~~~~W~~~~~~~~~-----~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
.+.+|+++.|.|.+. | .|.+.+.|++++..+.. ......... ....+.|.|.+++.+|+|.|+|.|.|..
T Consensus 19 ~v~~G~~v~L~C~~~-g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 97 (122)
T 3s35_X 19 ELSVGEKLVLNCTAR-TELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 97 (122)
T ss_dssp EEEETCCEEEEEEEE-ECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred EEecCCeEEEEEEEE-cCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCC
Confidence 456899999999994 6 45679999998874431 111111110 1135679999999999999999999999
Q ss_pred cceeeeEEEEEEeecCCCCCeeeeecc
Q psy11132 187 AQARYSSKLQVKGNLNRLPPSYTLVFS 213 (243)
Q Consensus 187 g~~~~~~~l~v~~~~~~~~p~~~~~~~ 213 (243)
|.....+.|.|. .+|.+.+.+.
T Consensus 98 g~~~~~~~l~V~-----~~p~i~~~p~ 119 (122)
T 3s35_X 98 MTKKNSTFVRVH-----EKPFVAFGSG 119 (122)
T ss_dssp CEEEEEEEEEEE-----EEECC-----
T ss_pred CceEEEEEEEEe-----ccCeEEeecC
Confidence 999999999998 5666655543
No 392
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.51 E-value=6.4e-14 Score=95.98 Aligned_cols=115 Identities=11% Similarity=0.070 Sum_probs=79.4
Q ss_pred CCCCCcEEEEEEeec-CCCCCEEEEEeCCEecC----------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 117 LPEGARTRVICGVTH-GDPPLTIRWLKDGKPLS----------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 117 ~~~g~~~~l~C~~~~-~~p~~~~~W~~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
+.+|+.+.|.|.... ..+.+.+.|++++..+. ...+.... ..+.|.|.+++.+|+|.|+|.|.|.
T Consensus 8 ~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~----~~gsL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 8 GALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL----ANGDLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEEC----TTSCEEESSCCGGGCEEEEEEEEET
T ss_pred EEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEEC----CCCcEEEcccccccCEEEEEEEEeC
Confidence 468999999994322 25567999999986542 11111111 1245999999999999999999999
Q ss_pred Ccce--eeeEEEEEEeecCCCCCeeeeeccceeeeccCcccc--cccceEEeCCeeE
Q psy11132 186 AAQA--RYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYSF--EQDSWMIDNENYV 238 (243)
Q Consensus 186 ~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~~ 238 (243)
.|.. ...+.|.|... ..+|.+... ...+.+.|..... +.++|+++|+.+.
T Consensus 84 ~g~~~~~~~~~l~V~~~--~~~p~i~~~-~~~v~L~C~~~g~p~p~i~W~~~g~~l~ 137 (176)
T 1hng_A 84 NGTRILNKALDLRILEM--VSKPMIYWE-CSNATLTCEVLEGTDVELKLYQGKEHLR 137 (176)
T ss_dssp TCCEEEEEEEEEEEECC--CCCCEEEEE-TTTTEEEEECSSCSSCEEEEEETTEEEE
T ss_pred CCCEEEEEEEEEEEeCC--CCCCEEEec-CCcEEEEEEecCCCCcEEEEEECCEECC
Confidence 9886 56677777632 234555543 3346788866544 5899999997664
No 393
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=2.8e-14 Score=87.65 Aligned_cols=84 Identities=18% Similarity=0.395 Sum_probs=66.5
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVR 87 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 87 (243)
.+|.+...+....+.+|+.++|.|.+. +.|.+.+.|++++..+.... ...|.|.+++.+|+|.|+|.+.
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~-g~p~~~v~W~k~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~ 77 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVP-AQPSPQIHWMKDGVPLPLPP----------SPVLILPEIGPQDQGTYSCVAT 77 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCS-SCSSCCCCCEESSSBCSSCC----------CSEEEEESCCTTTCEEEECEEC
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEc-cCCCCEEEEEECCEECcCCC----------CCEEEECCCCcccCEEEEEEEE
Confidence 356666667778899999999999994 77878999999998776532 4679999999999999999999
Q ss_pred eCCCc--ceeEEEEEEE
Q psy11132 88 NMVAE--DTQVQRLIVN 102 (243)
Q Consensus 88 ~~~~~--~~~~~~l~v~ 102 (243)
|..+. .+..+.|.|.
T Consensus 78 n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 78 HSSHGPQESRAVSISII 94 (96)
T ss_dssp CSSCCCEECCCEEEEEC
T ss_pred eCCCCcEEEEEEEEEEe
Confidence 96554 3445555554
No 394
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.50 E-value=9.2e-14 Score=99.09 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=81.4
Q ss_pred CCCCCCCcEEEEEEeecCCCC---CEEEEEeCCEec-----------CC------CCCeeEEe--eccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPP---LTIRWLKDGKPL-----------SP------RFPVNVSD--LDSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~~~~~-----------~~------~~~~~~~~--~~~~~~~l~i~~~~~ 172 (243)
..+.+|+++.|.|.+. +.+. ..+.|+|++... .. ..+..... .......|.|.+++.
T Consensus 14 V~v~~G~~v~L~C~v~-~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 92 (226)
T 4f80_A 14 ILAMVGEDADLPCHLF-PTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTA 92 (226)
T ss_dssp EEEETTSCEEEEEEEE-SCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCG
T ss_pred EEEEcCCcEEEEEEEE-CCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCch
Confidence 3456899999999984 5443 379999876421 10 00111111 122357899999999
Q ss_pred CCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCccc---ccccceEEeCCe
Q psy11132 173 AHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYS---FEQDSWMIDNEN 236 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~W~~~~~~ 236 (243)
+|+|.|+|.|.|..|.....+.+.+.......+.......+..+.+.|.... .+.++|++++..
T Consensus 93 ~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~ 159 (226)
T 4f80_A 93 SDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGE 159 (226)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSC
T ss_pred HHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCce
Confidence 9999999999998888777766666543333333455667788888887654 358999996543
No 395
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.50 E-value=6.6e-14 Score=84.71 Aligned_cols=74 Identities=19% Similarity=0.327 Sum_probs=58.5
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
.+.+|+.+.|.|.+ .+ |.+.+.|+++|..+.....+.+.. ++....|.|.++..+|+|.|+|.|.|. +.++.|
T Consensus 17 ~~~~g~~v~l~C~v-~~-p~~~v~W~k~g~~i~~~~~~~i~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l 89 (91)
T 2lvc_A 17 HAITSECVMLACEV-DR-EDAPVRWYKDGQEVEESDFVVLEN-EGPHRRLVLPATQPSDGGEFQCVAGDE----CAYFTV 89 (91)
T ss_dssp ECCTTCCEEEEEEC-SC-TTSCCEEEETTSCCCCCSSCEEEE-ETTEEEEEESSCCGGGCSEEEEECSSC----EEEEEE
T ss_pred EEECCCcEEEEEEE-CC-CCcEEEEEECCEEeeeeeeeeEEe-cCCeEEEEeCCCChhhcEEEEEEEcce----EEEEEE
Confidence 34689999999998 45 778899999999998776665543 344578999999999999999999663 444544
Q ss_pred E
Q psy11132 196 Q 196 (243)
Q Consensus 196 ~ 196 (243)
+
T Consensus 90 t 90 (91)
T 2lvc_A 90 T 90 (91)
T ss_dssp E
T ss_pred E
Confidence 4
No 396
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.50 E-value=3.1e-13 Score=83.61 Aligned_cols=77 Identities=25% Similarity=0.490 Sum_probs=62.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ . .|.+.+.|++++..+.....+.... ......|.|.++..+|+|.|+|.| |....++.
T Consensus 18 ~~v~~G~~v~l~C~~-~-~p~~~v~W~k~g~~i~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~ 90 (100)
T 2yuv_A 18 YQVDKGGRVRFVVEL-A-DPKLEVKWYKNGQEIRPSTKYIFEH-KGCQRILFINNCQMTDDSEYYVTA----GDEKCSTE 90 (100)
T ss_dssp EEECTTEEEEEEEEE-S-CTTSCEEEEESSCBCCCBTTEEEEE-ETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEE
T ss_pred cEEcCCCcEEEEEEe-c-CCCceEEEEECCEECCCCCCEEEEe-cCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEE
Confidence 356789999999999 4 5889999999999887765555442 334568999999999999999999 66777788
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 91 l~V~ 94 (100)
T 2yuv_A 91 LFVR 94 (100)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8888
No 397
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.50 E-value=7.8e-14 Score=85.99 Aligned_cols=78 Identities=26% Similarity=0.497 Sum_probs=62.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+..+.|.+.+.|++++......... ...+.|.|.+++.+|+|.|.|.|.|..|.....+.
T Consensus 20 ~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~------~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (98)
T 1gl4_B 20 QSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAM------DFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTAT 93 (98)
T ss_dssp EEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEE------EETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceee------cCCCEEEEeCCChhhCEEEEEEecCCCCccccEEE
Confidence 356789999999999547899999999976544332211 11357999999999999999999999999888888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 94 l~V~ 97 (98)
T 1gl4_B 94 LHVQ 97 (98)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8775
No 398
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.50 E-value=1.8e-13 Score=96.53 Aligned_cols=118 Identities=18% Similarity=0.222 Sum_probs=83.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeC--CEecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKD--GKPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+. +.+.+.|+++ +.... ...++.... ......|.|.+++.+|+|.|.|
T Consensus 10 ~~v~~G~~v~L~C~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 85 (211)
T 3tv3_L 10 ASGSPGQSITISCTGT---SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-SGNTASLTVSGLQTDDEAVYYC 85 (211)
T ss_dssp EEECTTCEEEEEEECC---CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEEESCCGGGCEEEEE
T ss_pred EEEcCCCCEEEEEEEC---CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-cCCEEEEEECCCChhHCEEEEE
Confidence 4567899999999983 8889999984 22111 111222222 3345789999999999999999
Q ss_pred EEEccCc--ceeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc----cccceEEeCCee
Q psy11132 181 VASNTAA--QARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF----EQDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g--~~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~----~~~~W~~~~~~~ 237 (243)
.|.|..+ .....+.|.|.... ..+|.+.+.+ ++.+.+.|....+ +.+.|++||..+
T Consensus 86 ~~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 154 (211)
T 3tv3_L 86 GSLVGNWDVIFGGGTKLTVLGQP-KAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV 154 (211)
T ss_dssp EEEETTTEEEECCCEEEEECCSC-CBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred EEecCCCceeECCCceEEEeCCC-CcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeec
Confidence 9999887 34455677776322 2466665544 6778899987663 378999998765
No 399
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.50 E-value=1e-13 Score=97.05 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=80.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCc-----ce
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA-----QA 189 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g-----~~ 189 (243)
..+.+|++++|.|.+ . .+.+.+.|+|+|..+.................|.|.+++.+|+|.|+|.+.|... ..
T Consensus 17 ~~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~ 94 (201)
T 1nkr_A 17 PLVKSEETVILQCWS-D-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAP 94 (201)
T ss_dssp SEEETTCCEEEEEEE-S-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCC
T ss_pred CccCCCCcEEEEEec-c-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCC
Confidence 456789999999998 4 3678999999987653211000001112357799999999999999999987532 22
Q ss_pred eeeEEEEEEeecCCCCCeee------eeccceeeeccCccc-ccccceEEeCCee
Q psy11132 190 RYSSKLQVKGNLNRLPPSYT------LVFSQASYMSTSYYS-FEQDSWMIDNENY 237 (243)
Q Consensus 190 ~~~~~l~v~~~~~~~~p~~~------~~~~~~~~~~~~~~~-~~~~~W~~~~~~~ 237 (243)
+..+.|.|.+.. .+|.+. +..++.+.+.|.... .+.+.|+|+|+.+
T Consensus 95 s~~~~l~V~~~~--~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~ 147 (201)
T 1nkr_A 95 SDPLDIVIIGLY--EKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAH 147 (201)
T ss_dssp CCCEEEEEECSS--CCCEEEEESCSEECTTCEEEEEEEESSCCSEEEEEETTCSS
T ss_pred CCCEEEEeeccC--CCCceecCCCCccCCCCeEEEEEeCCCCCceEEEEECCccc
Confidence 445677776422 344443 445678888887643 2478999998764
No 400
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.50 E-value=1.7e-13 Score=94.92 Aligned_cols=117 Identities=9% Similarity=0.090 Sum_probs=80.9
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce--eeeE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSS 193 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~ 193 (243)
.+.+|++++|.|.+ .+ +++.+.|++++..+...... .........|.|.+++.+|+|.|+|.+.|..+.. +..+
T Consensus 14 ~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~ 89 (188)
T 1oll_A 14 MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPK--PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL 89 (188)
T ss_dssp EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCS--SCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred cCCCCCCEEEEEec-CC-CCCEEEEEECCCcccccccc--cCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCce
Confidence 56789999999998 34 45799999999875421000 0012235789999999999999999999876533 4456
Q ss_pred EEEEEeecCCCCCee------eeeccceeeeccCcccc-cccceEEeCCeeE
Q psy11132 194 KLQVKGNLNRLPPSY------TLVFSQASYMSTSYYSF-EQDSWMIDNENYV 238 (243)
Q Consensus 194 ~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~~-~~~~W~~~~~~~~ 238 (243)
.|.|.+.. .+|.+ .+..++.+.+.|..... +.+.|+|+|..+.
T Consensus 90 ~l~V~~~~--~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~ 139 (188)
T 1oll_A 90 DLVVTEMY--DTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSH 139 (188)
T ss_dssp EEEEESCS--CCCEEEEESCSEEETTCEEEEEEECSSSCSEEEEEEESSSCE
T ss_pred EEEecccC--CCCeEEECCCCccccCCEEEEEEEcCCCCCEEEEEECCcccc
Confidence 77776322 23433 34567788889976433 4799999997653
No 401
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.49 E-value=5e-13 Score=94.52 Aligned_cols=119 Identities=22% Similarity=0.279 Sum_probs=84.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe-eEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV-NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+...... .........+.|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 28 ~~~~~G~~v~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 106 (215)
T 3mtr_A 28 VYTWEGNQVNITCEV-FAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEF 106 (215)
T ss_dssp EEECTTCCEEEEEEE-EEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEE
T ss_pred EEEECCCCEEEEEEE-eecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEE
Confidence 456789999999999 58899999999999998765321 1222223467899999999999999999999999988888
Q ss_pred EEEEEeecCCCCCeee-e-eccceeeeccCccc----cc----ccceEEeCCe
Q psy11132 194 KLQVKGNLNRLPPSYT-L-VFSQASYMSTSYYS----FE----QDSWMIDNEN 236 (243)
Q Consensus 194 ~l~v~~~~~~~~p~~~-~-~~~~~~~~~~~~~~----~~----~~~W~~~~~~ 236 (243)
.+.|...+ .+|... . .......+.|..-. .+ .+.|.+++..
T Consensus 107 ~l~v~~~P--~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~ 157 (215)
T 3mtr_A 107 ILVQADTP--SSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEE 157 (215)
T ss_dssp EEEECCCC--CCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCC
T ss_pred EEEECCCC--CCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCC
Confidence 88877433 333322 2 22345556654211 11 4778877764
No 402
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=8e-14 Score=87.88 Aligned_cols=85 Identities=18% Similarity=0.257 Sum_probs=64.0
Q ss_pred CCCCCCCCCcEEEEEEeecCC---CCCEEEEEeCCE-ecCC--CCCeeEEe-ec----cceeEEEEeecCCCCCeeEEEE
Q psy11132 113 PFDGLPEGARTRVICGVTHGD---PPLTIRWLKDGK-PLSP--RFPVNVSD-LD----SFSSLLSINSVSAAHSGEYTCV 181 (243)
Q Consensus 113 ~~~~~~~g~~~~l~C~~~~~~---p~~~~~W~~~~~-~~~~--~~~~~~~~-~~----~~~~~l~i~~~~~~d~g~y~C~ 181 (243)
....+.+|+.+.|.|.+. +. |.|.+.|||+.. .+.. .....+.. .. ...+.|.|.++..+|+|.|+|.
T Consensus 20 ~~v~V~eG~~v~L~C~v~-g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Ce 98 (118)
T 2edn_A 20 DSVSVETGKDAVVVAKVN-GKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLE 98 (118)
T ss_dssp CCCEEETTSCEECCEEEE-TTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEE
T ss_pred CCeEEeCCCCEEEEEEEe-ccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEE
Confidence 335678999999999995 54 789999999752 2221 11222211 11 1257899999999999999999
Q ss_pred EEccCcceeeeEEEEEE
Q psy11132 182 ASNTAAQARYSSKLQVK 198 (243)
Q Consensus 182 ~~n~~g~~~~~~~l~v~ 198 (243)
|.|..|..+..+.|.|.
T Consensus 99 vsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 99 VKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp EECSSCEEEEEECCEEE
T ss_pred EEEcCCcEEEEEEEEEE
Confidence 99999999999999998
No 403
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.49 E-value=3.1e-13 Score=84.85 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=62.0
Q ss_pred CCCCCCCcEEEEEEeecCCCC---CEEEEEeCCEecCC---CCCeeEEee-----ccceeEEEEeecCCCCCeeEEEEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPP---LTIRWLKDGKPLSP---RFPVNVSDL-----DSFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~~~~~~~---~~~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
..+..|+++.|.|.+ .|.|. +.+.|++++..... ......... ......|.|.+++.+|+|.|.|.|.
T Consensus 14 ~~v~~G~~v~L~C~~-~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (108)
T 3cx2_A 14 GEVTVGGSITFSARV-AGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVS 92 (108)
T ss_dssp EEEETTCCEEEEEEE-ECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEeCCCCEEEEEEE-CCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEe
Confidence 457899999999999 58887 99999998732111 111221111 1124689999999999999999999
Q ss_pred ccCcceeeeEEEEEE
Q psy11132 184 NTAAQARYSSKLQVK 198 (243)
Q Consensus 184 n~~g~~~~~~~l~v~ 198 (243)
|..|....++.|.|.
T Consensus 93 N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 93 TKDKFDCSNFNLTVH 107 (108)
T ss_dssp CSSCEEEEEEEEEEE
T ss_pred cCCCceEEEEEEEEe
Confidence 999999999998886
No 404
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.6e-13 Score=84.29 Aligned_cols=81 Identities=26% Similarity=0.471 Sum_probs=63.9
Q ss_pred CcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCCcceeEE
Q psy11132 18 ERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVAEDTQVQ 97 (243)
Q Consensus 18 ~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 97 (243)
...+.+|+.+.|.|.+. .|.+.+.|+|++..+....++.+.... ....|.|.+++.+|+|.|+|.+.+ ....+
T Consensus 20 ~~~v~~G~~v~L~C~~~--~p~~~v~W~k~g~~~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~ 92 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA--QAQTEVTWYKDGKKLSSSSKVRVEAVG-CTRRLVVQQAGQAEAGEYSCEAGG----QQLSF 92 (102)
T ss_dssp EEEEETTCCEEECCBCS--CSSSCCEEEETTEECCCCSSEEEEEET-TEEEEEETTCCTTTCSCEEEEETT----EECCE
T ss_pred cEEEeCCCcEEEEEEec--CCCCceEEEECCEECCCCCCEEEEEcC-CEEEEEECCCCcccCEEEEEEcCC----CcEEE
Confidence 44788999999999984 677899999999998876666554322 246899999999999999999843 34557
Q ss_pred EEEEEcCC
Q psy11132 98 RLIVNVPP 105 (243)
Q Consensus 98 ~l~v~~~p 105 (243)
.|.|..+|
T Consensus 93 ~l~V~~p~ 100 (102)
T 2eo1_A 93 RLQVAGQC 100 (102)
T ss_dssp EEEEESCC
T ss_pred EEEEeCCC
Confidence 78887654
No 405
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=3.1e-13 Score=84.05 Aligned_cols=77 Identities=22% Similarity=0.443 Sum_probs=62.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC--CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF--PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 192 (243)
..+.+|+.+.|.|.+ .+ |.+.+.|++++..+.... .+... .+.....|.|.++..+|+|.|+|.|.| ....
T Consensus 17 ~~v~~G~~v~l~C~~-~~-~~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~ 89 (103)
T 1x44_A 17 TTAYCGERVELECEV-SE-DDANVKWFKNGEEIIPGPKSRYRIR-VEGKKHILIIEGATKADAAEYSVMTTG----GQSS 89 (103)
T ss_dssp EEEETTEEEEEEEEC-SS-SSCCCEEEETTEECCCSTTCSEEEE-EETTEEEEEEEEECTTTCSEEEEEETT----EEEE
T ss_pred EEEECCCCEEEEEEe-cC-CCCeEEEEECCEECCCCCceEEEEE-EcCCEEEEEECCCCcccCEEEEEEECC----CcEE
Confidence 567789999999999 56 668999999999987765 33433 233457899999999999999999988 4666
Q ss_pred EEEEEE
Q psy11132 193 SKLQVK 198 (243)
Q Consensus 193 ~~l~v~ 198 (243)
+.|.|.
T Consensus 90 ~~l~V~ 95 (103)
T 1x44_A 90 AKLSVD 95 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777777
No 406
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.49 E-value=2.2e-13 Score=85.51 Aligned_cols=82 Identities=18% Similarity=0.299 Sum_probs=63.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE-ecC-------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK-PLS-------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~-~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
..+.+|+++.|.|.+ .+.|.+.+.|++++. .+. ...+............|.|.+++.+|+|.|.|.|.| .
T Consensus 16 ~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~ 93 (108)
T 3m45_A 16 VTVVEGGTAILTCRV-DQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-M 93 (108)
T ss_dssp EEEETTSCEEEEEEE-SSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-S
T ss_pred eEEEeCCcEEEEeEE-cCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-C
Confidence 567789999999999 688889999998764 111 122333333333467899999999999999999999 8
Q ss_pred cceeeeEEEEEE
Q psy11132 187 AQARYSSKLQVK 198 (243)
Q Consensus 187 g~~~~~~~l~v~ 198 (243)
+.....+.|.|.
T Consensus 94 ~~~~~~~~L~V~ 105 (108)
T 3m45_A 94 PVKTSKAYLTVL 105 (108)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 888888888888
No 407
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.49 E-value=1.1e-13 Score=97.28 Aligned_cols=118 Identities=17% Similarity=0.247 Sum_probs=82.7
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEec----------C--CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL----------S--PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVA 182 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~----------~--~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 182 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++..+ . ...+.... ...|.|.+++.+|+|.|+|.+
T Consensus 14 ~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~L~i~~~~~~d~G~Y~C~~ 87 (209)
T 1nbq_A 14 VRIPENNPVKLSCAY-SGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-----PTGITFKSVTREDTGTYTCMV 87 (209)
T ss_dssp CCEETTCCCEEECEE-ESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-----TTEEECSCCCTTSCSEEEEEE
T ss_pred eEEEcCCCEEEEEEE-eCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-----ccEEEEeeCCHHHCcEEEEEE
Confidence 556789999999999 58899999999977542 1 11111111 267999999999999999999
Q ss_pred EccCcc--eeeeEEEEEEeecC--CCCCeeeeeccceeeeccCc-ccc--cccceEEeCCeeE
Q psy11132 183 SNTAAQ--ARYSSKLQVKGNLN--RLPPSYTLVFSQASYMSTSY-YSF--EQDSWMIDNENYV 238 (243)
Q Consensus 183 ~n~~g~--~~~~~~l~v~~~~~--~~~p~~~~~~~~~~~~~~~~-~~~--~~~~W~~~~~~~~ 238 (243)
.|..|. ....+.|.|...+. ..+....+..++.+.+.|.. ... +.+.|+++|..+.
T Consensus 88 ~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~ 150 (209)
T 1nbq_A 88 SEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMP 150 (209)
T ss_dssp EETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCC
T ss_pred ecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCC
Confidence 998663 34556666663221 11122345678888999985 444 4899999987653
No 408
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.48 E-value=3.2e-13 Score=95.33 Aligned_cols=119 Identities=19% Similarity=0.258 Sum_probs=82.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE--ec----------CC--CCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK--PL----------SP--RFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~--~~----------~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++. .+ .. ..+..... ......|.|.+++.+|+|.|.|
T Consensus 11 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3d9a_L 11 LSVTPGNSVSLSCRA-SQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETEDFGMYFC 88 (213)
T ss_dssp EEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEEE
T ss_pred EEEeCCCcEEEEEEC-CCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-CCCEEEEEECCCChhhCEEEEE
Confidence 456789999999999 688888999998532 11 10 12222222 3345689999999999999999
Q ss_pred EEEccCccee-eeEEEEEEeecCCCCCeeeeec-------cceeeeccCccc-cc---ccceEEeCCee
Q psy11132 181 VASNTAAQAR-YSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYS-FE---QDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~-~~---~~~W~~~~~~~ 237 (243)
.|.|..+... ....+.|... ..+|.+.+.+ ++.+.+.|.... .| .+.|+++|..+
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~--~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~ 155 (213)
T 3d9a_L 89 QQSNSWPYTFGGGTKLEIKRA--DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 155 (213)
T ss_dssp EECSSSSCEECCCEEEEECCC--CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred eeecCCcceeCCCEEEEEecC--CCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcC
Confidence 9999877543 3346666521 1366655432 568889998765 22 69999998764
No 409
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.48 E-value=3.2e-13 Score=85.19 Aligned_cols=83 Identities=23% Similarity=0.473 Sum_probs=61.9
Q ss_pred CCCCCCCcEEEEEEeec-CCCCCEEEEEeCCEecCCCCCeeEEeecc-------ceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 115 DGLPEGARTRVICGVTH-GDPPLTIRWLKDGKPLSPRFPVNVSDLDS-------FSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
..+..|+.+.|.|.+.. +.+.+.+.|++++..+............. ....|.|.++..+|+|.|+|.|.|..
T Consensus 20 ~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 99 (112)
T 3so5_A 20 QSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHF 99 (112)
T ss_dssp EEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCC
Confidence 45778999999999953 24468999999999887543211111111 14789999999999999999999999
Q ss_pred cc-eeeeEEEEE
Q psy11132 187 AQ-ARYSSKLQV 197 (243)
Q Consensus 187 g~-~~~~~~l~v 197 (243)
|. .+..+.|.|
T Consensus 100 g~~~s~~~~l~V 111 (112)
T 3so5_A 100 GSSYSVXAXLTI 111 (112)
T ss_dssp EEEECCCEEEEE
T ss_pred CcEEEeEEEEEe
Confidence 97 456677765
No 410
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.48 E-value=2.1e-13 Score=82.84 Aligned_cols=73 Identities=22% Similarity=0.395 Sum_probs=61.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee-eeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~-~~~ 193 (243)
..+.+|+.+.|.|.+ .|.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..|... ..+
T Consensus 13 ~~v~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~ 81 (91)
T 3bfo_A 13 QKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHET----------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKV 81 (91)
T ss_dssp EEECTTSCEEEECEE-ECSSCCEEEEEETTEECTTCC----------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCE
T ss_pred cEecCCCcEEEEEEe-ccCCCCEEEEEcCCeeCCcCC----------CCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeE
Confidence 346789999999998 589999999999999877543 35799999999999999999999999654 456
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.+.|.
T Consensus 82 ~l~V~ 86 (91)
T 3bfo_A 82 EIIID 86 (91)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66665
No 411
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.48 E-value=4.1e-14 Score=98.85 Aligned_cols=117 Identities=14% Similarity=0.194 Sum_probs=79.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccC-c--ceee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA-A--QARY 191 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~-g--~~~~ 191 (243)
..+.+|++++|.|.+ .+.|. .+.|++++..+...... .........|.|.++..+|+|.|+|.|.|.. | ....
T Consensus 14 ~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~ 89 (198)
T 1ugn_A 14 SVITQGSPVTLRCQG-GQETQ-EYRLYREKKTAPWITRI--PQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSD 89 (198)
T ss_dssp SEEETTCCEEEEEEC-CTTCC-CEEEEESSSCCHHHHTS--CHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCC
T ss_pred CcccCCCcEEEEEEe-cCCCc-EEEEEECCccccccccc--cccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCc
Confidence 356789999999998 46665 79999998866421100 0011224679999999999999999999987 5 3345
Q ss_pred eEEEEEEeecCCCCCee------eeeccceeeeccCccc-ccccceEEeCCee
Q psy11132 192 SSKLQVKGNLNRLPPSY------TLVFSQASYMSTSYYS-FEQDSWMIDNENY 237 (243)
Q Consensus 192 ~~~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~-~~~~~W~~~~~~~ 237 (243)
.+.|.|.... .+|.+ .+..++.+.+.|.... .+.+.|+++|..+
T Consensus 90 ~~~l~V~~~~--~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~v~W~k~g~~~ 140 (198)
T 1ugn_A 90 PLELVVTGAY--IKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDE 140 (198)
T ss_dssp CEEEEEECSS--CCCEEEEESCSEEETTCCEEEEEECSSCCSEEEEEEC----
T ss_pred cEEEEEcccc--cCCccccCCccccCCCCcEEEEEecCCCCcEEEEEECCCcc
Confidence 6777776421 23333 3456778888886654 3589999999765
No 412
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.1e-13 Score=84.18 Aligned_cols=78 Identities=22% Similarity=0.385 Sum_probs=64.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+..|+.+.|.|.+ .+.| +.+.|++++..+......... ...|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 13 ~~v~~G~~v~L~C~~-~g~p-p~i~W~k~g~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 85 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRL-RDDV-QSINWLRDGVQLAESNRTRIT-----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFS 85 (99)
T ss_dssp CCBCTTSCEEEECCC-CSSC-CEEEEEESSSBCCCCSSEEEC-----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCcEEEEEEe-cCCC-CeEEEEECCEECCCCCcEEEE-----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEE
Confidence 567899999999999 5766 699999999888665443332 368999999999999999999999998888888
Q ss_pred EEEEe
Q psy11132 195 LQVKG 199 (243)
Q Consensus 195 l~v~~ 199 (243)
|.|.+
T Consensus 86 l~V~~ 90 (99)
T 2cr3_A 86 VNVSD 90 (99)
T ss_dssp ECBCS
T ss_pred EEEec
Confidence 87773
No 413
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.47 E-value=3.6e-13 Score=94.90 Aligned_cols=119 Identities=16% Similarity=0.257 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--Eec------------CCCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPL------------SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+ .+.|.+.+.|++++ ..+ ....+..... ......|.|.+++.+|+|.|.|
T Consensus 10 ~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 87 (210)
T 1lk3_L 10 LTVSPGEKLTISCKA-SESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-SGTDFTLTIDPVEADDTAIYFC 87 (210)
T ss_dssp EEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEE
T ss_pred EEEcCCCCEEEEeeC-CCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-cCCEEEEEECCCCHHHCeEEEE
Confidence 456789999999999 68888899999842 221 0112222222 3335689999999999999999
Q ss_pred EEEccCccee-eeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 181 VASNTAAQAR-YSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.|.|..+... ....+.|... ..+|.+.+. .++.+.+.|....+ + .+.|+++|..+
T Consensus 88 ~~~~~~~~~~~~~~~l~V~~~--~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~ 154 (210)
T 1lk3_L 88 QQSWNGPLTFGAGTKLELKRA--DAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTER 154 (210)
T ss_dssp EECSSSSCEECCCEEEEECCC--CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred EEEcCCCceeCCCEEEEEcCC--CcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccC
Confidence 9999876443 3346666522 135665543 25688999987653 2 69999998754
No 414
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.47 E-value=2.6e-14 Score=102.65 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=77.8
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEcCCCccccccCCCC-CCCCCcEEEEEEeecCC--C-CCEEEEEeCCEecCCCCCeeE
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNVPPKIESFAFPFDG-LPEGARTRVICGVTHGD--P-PLTIRWLKDGKPLSPRFPVNV 155 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~--p-~~~~~W~~~~~~~~~~~~~~~ 155 (243)
|.|.|.+.+..+. .... .+..+|.+...++.... +..|+.+.|.|.+.+.. | .+.++|+++|..+........
T Consensus 1 ~~~~~~~~~~~~~--c~~~-~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAP-ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp -------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC--CCcc-ccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 6788988875542 1111 11223444433333233 45699999999996444 4 458999999998754321111
Q ss_pred -Eeecc---ceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCccc
Q psy11132 156 -SDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYS 224 (243)
Q Consensus 156 -~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~ 224 (243)
...++ ..+.|.|.....+|.|.|+|.|.|..+.......+... .....+|.+.+.+ +..+.+.|....
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~-~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~g 156 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA-KGQPREPQVYTLPPSRDELTKNQVSLTCLVKG 156 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCC-CSCCBCCEEEEECCCGGGGGSSEEEEEEEEEE
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCcccccccccc-CCCCCCCEEEEECCChHHhcCCceEEEEEEeE
Confidence 11111 12567777666778899999999987643222222210 1122566655432 457788998877
Q ss_pred c-c---ccceEEeCCee
Q psy11132 225 F-E---QDSWMIDNENY 237 (243)
Q Consensus 225 ~-~---~~~W~~~~~~~ 237 (243)
+ | .+.|++||+.+
T Consensus 157 f~P~~i~v~W~k~g~~~ 173 (240)
T 4acp_A 157 FYPSDIAVEWESNGQPE 173 (240)
T ss_dssp EBSSCCEEEEEETTEEC
T ss_pred EeCCCcEEEEEECCEEC
Confidence 5 3 68999998764
No 415
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.47 E-value=1.5e-13 Score=94.40 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=79.4
Q ss_pred CCCCCcEEEEEEeec-CCCCCEEEEEe--CCEecC----------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEE
Q psy11132 117 LPEGARTRVICGVTH-GDPPLTIRWLK--DGKPLS----------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 117 ~~~g~~~~l~C~~~~-~~p~~~~~W~~--~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
...|+++.|.|.... +.+.+.+.|++ ++..+. ...+.... .++.|.|.+++.+|+|.|+|.|.
T Consensus 11 g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~----~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 11 GALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF----KNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC----TTSCEEECSCCGGGCEEEEEEEE
T ss_pred EecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC----CCCCEEECCCChhhCEEEEEEEE
Confidence 467999999995421 34567999999 877652 12222221 23579999999999999999999
Q ss_pred ccCccee--eeEEEEEEeecCCCCCeeeeeccceeeeccCcccc--cccceEEeCCee
Q psy11132 184 NTAAQAR--YSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 184 n~~g~~~--~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
|..|... ..+.|.|... ..+|.+.... ..+.++|..... +.+.|+++|+.+
T Consensus 87 n~~g~~~~~~~~~L~V~~~--~~~P~i~~~~-~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQER--VSKPKISWTC-INTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp ETTSCEEEEEEEEEEEECC--CCCCEEEEET-TTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred eCCCceeEEEEEEEEEcCc--CCCCEEEEcc-CcEEEEeEccCCCCCEEEEEECCEEC
Confidence 9888754 4566666632 2456665543 256788876543 589999999865
No 416
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.47 E-value=1.9e-13 Score=95.94 Aligned_cols=106 Identities=16% Similarity=0.255 Sum_probs=73.3
Q ss_pred CCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEEE
Q psy11132 117 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 196 (243)
Q Consensus 117 ~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l~ 196 (243)
+..|+++.|.|.+ |.+.+.|+++|..+... ......|.|.+++.+|+|.|+|.+.+.. + ..+.+.
T Consensus 15 ~~~G~~v~L~C~~----p~~~i~W~k~g~~l~~~--------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~ 79 (204)
T 1sy6_A 15 YQEDGSVLLTCDA----EAKNITWFKDGKMIGFL--------TEDKKKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVY 79 (204)
T ss_dssp CCSSSEEEEEECS----CSSEEEEEETTEEEEEE--------ESSCCCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEE
T ss_pred ecCCCeEEEEEcC----CCCEEEEEECCEECCCC--------CCCCCeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEE
Confidence 4689999999976 77899999999876532 1124679999999999999999976532 2 224444
Q ss_pred EE---------------------------e-----ecCCCCCeeeeeccceeeeccCcccccccceEEeCCee
Q psy11132 197 VK---------------------------G-----NLNRLPPSYTLVFSQASYMSTSYYSFEQDSWMIDNENY 237 (243)
Q Consensus 197 v~---------------------------~-----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 237 (243)
+. . .....+|......++.+.+.|.....+.+.|+++|..+
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g~p~p~i~W~k~~~~l 152 (204)
T 1sy6_A 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNI 152 (204)
T ss_dssp EEC------------------------------------CCCCEEEEETTEEEEECSCCCSSCEEEEETTEEE
T ss_pred EEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcCCCCCCceEEEECCEEC
Confidence 33 0 00011222222378889999996666789999998765
No 417
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.47 E-value=3.4e-14 Score=102.75 Aligned_cols=115 Identities=18% Similarity=0.302 Sum_probs=78.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCE-----EEEEeCCEecCCC-----------------CCeeEEeeccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLT-----IRWLKDGKPLSPR-----------------FPVNVSDLDSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~-----~~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~i~~~~~ 172 (243)
..+..|+++.|.|.+. +.|.+. +.|++++...... ..............|.|.+++.
T Consensus 13 ~~v~~G~~v~L~C~~~-g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~ 91 (248)
T 3pv7_A 13 QITPLNDNVTIFCNIF-YSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQL 91 (248)
T ss_dssp EEEETTSCEEECCEEE-ESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCG
T ss_pred eEEeCCCCEEEeeEEe-cCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCH
Confidence 3467899999999994 666554 9999864332110 0000000111235699999999
Q ss_pred CCCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeeee------ccceeeeccCccc-c--c-ccceEEeCC
Q psy11132 173 AHSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTLV------FSQASYMSTSYYS-F--E-QDSWMIDNE 235 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~------~~~~~~~~~~~~~-~--~-~~~W~~~~~ 235 (243)
+|+|.|+|.+.+..+.....+.|.|. .+|.+.+. .+..+.+.|.... . + .+.|+++|+
T Consensus 92 ~D~G~Y~C~~~~~~~~~~~~~~L~V~-----~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 92 EEAGEYRCEVVVTPLKAQGTVQLEVV-----ASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEE-----BCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred HHCeEEEEEEEeCCccceeEEEEEEe-----cCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 99999999999998887788888888 56665543 3456668998766 3 3 899999996
No 418
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.47 E-value=2.2e-13 Score=92.65 Aligned_cols=110 Identities=14% Similarity=0.223 Sum_probs=79.2
Q ss_pred CCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+. +.| .+.+.|++++..+.... ..+.+.+++.+|+|.|+|.+.|..+. ..+
T Consensus 14 ~~v~~G~~v~l~C~~~-~~p~~~~~~W~~~g~~~~~~~-----------~~~~~~~~~~~d~G~Y~C~~~~~~~s--~~~ 79 (170)
T 3ry4_A 14 INVLQEDSVTLTCQGA-RSPESDSIQWFHNGNLIPTHT-----------QPSYRFKANNNDSGEYTCQTGQTSLS--DPV 79 (170)
T ss_dssp SEEETTCEEEEEEESC-CCSSSSCEEEEETTEECTTCC-----------SSEEEEECCGGGCEEEEEEETTSBCC--CCE
T ss_pred eEEECCCcEEEEEEec-CCCCcceEEEEECCeEcccCc-----------cceEEEecccccCeEEEEEEeCCCce--EeE
Confidence 3467899999999994 655 67999999999887542 33556789999999999999975443 345
Q ss_pred EEEEEeec-CCCCCeeeeeccceeeeccCccc---ccccceEEeCCeeE
Q psy11132 194 KLQVKGNL-NRLPPSYTLVFSQASYMSTSYYS---FEQDSWMIDNENYV 238 (243)
Q Consensus 194 ~l~v~~~~-~~~~p~~~~~~~~~~~~~~~~~~---~~~~~W~~~~~~~~ 238 (243)
.+.|...+ ...+|...+..++.+.+.|.... .+.+.|+++|..+.
T Consensus 80 ~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (170)
T 3ry4_A 80 HLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQK 128 (170)
T ss_dssp EEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEE
T ss_pred EEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcc
Confidence 66666211 11233445567788889997732 25899999987654
No 419
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.46 E-value=6.5e-13 Score=93.71 Aligned_cols=119 Identities=16% Similarity=0.217 Sum_probs=81.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE--ec------------CCCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK--PL------------SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~--~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++.+. .. ....++... .......|.|.+++.+|+|.|.|
T Consensus 11 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3r06_A 11 LPASLGDRVTINCQA-SQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGS-GSGRDSSFTISSLESEDIGSYYC 88 (213)
T ss_dssp EEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCSEEEE
T ss_pred EEecCCCcEEEEEEe-CCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEe-ccCCEEEEEECCCCcccCEEEEE
Confidence 456789999999999 577889999998321 00 011222222 23345689999999999999999
Q ss_pred EEEccCcc-eeeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 181 VASNTAAQ-ARYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g~-~~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.|.|..+. ......+.|.. ...+|.+.+. .++.+.+.|..... + .+.|+++|..+
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l 155 (213)
T 3r06_A 89 QQYYNYPWTFGPGTKLEIKR--ADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEK 155 (213)
T ss_dssp EECSSSSCEECCCEEEEECC--CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred ecccCCceEEcCCceEEEec--cCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCccc
Confidence 99987653 33445666631 2256666553 24568899987653 3 79999998765
No 420
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.46 E-value=1.3e-12 Score=90.00 Aligned_cols=99 Identities=23% Similarity=0.350 Sum_probs=77.7
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCC-CceeEEEE---CCee-ecCC--CceEEEEeeeeceEEEEeec
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDI-PLTIKWLK---DGRY-LDNS--AALSITHVDQYNSMLVIDSV 74 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~v~W~~---~~~~-~~~~--~~~~~~~~~~~~~~l~i~~~ 74 (243)
+.|.|..+|.+...+....+.+|+.+.|.|.+. +.| .+.+.|++ ++.. +... .++.+... .....|.|.++
T Consensus 76 ~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v 153 (184)
T 3b5h_A 76 ANIQLHGPPRVKAVKSSEHINEGETAMLVCKSE-SVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS-QGRSELHIENL 153 (184)
T ss_dssp EEEEECCSCCCEESCSEEEECTTSCEEEEEECC-CSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEE-TTEEEEEECSC
T ss_pred EEEEEecCCceeecCCCcEEcCCCcEEEEEEEC-CCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEec-CCeeEEEEeec
Confidence 467888999988887777899999999999995 777 78999999 4543 3322 34444322 23468999999
Q ss_pred C-CCCCeeEEEEEEeCCCcceeEEEEEEE
Q psy11132 75 S-ARHSGNYSCTVRNMVAEDTQVQRLIVN 102 (243)
Q Consensus 75 ~-~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 102 (243)
+ .+|.|.|+|.+.|..|.....+.|.|.
T Consensus 154 ~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 154 NMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 9 899999999999999988877888775
No 421
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.46 E-value=3.4e-13 Score=88.45 Aligned_cols=87 Identities=18% Similarity=0.313 Sum_probs=66.4
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCC----------CceEEEE--eeeeceEEEEee
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNS----------AALSITH--VDQYNSMLVIDS 73 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~----------~~~~~~~--~~~~~~~l~i~~ 73 (243)
...||.+...+....+.+|+++.|.|.+. +.|.+.+.|++++..+... .+..... .......|.|.+
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~-g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 96 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAV-GSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDT 96 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEE-CSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECS
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEe-eecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECC
Confidence 34688998888899999999999999995 7888899999987655321 2222221 112357899999
Q ss_pred cCCCCCeeEEEEEEeCCCcc
Q psy11132 74 VSARHSGNYSCTVRNMVAED 93 (243)
Q Consensus 74 ~~~~d~G~Y~C~~~~~~~~~ 93 (243)
++.+|+|.|+|.+.|..|..
T Consensus 97 v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 97 LVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CCGGGCEEEEEEEECCTTSS
T ss_pred CCcccCEEEEEEEEecCCcc
Confidence 99999999999999988864
No 422
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.46 E-value=4.1e-14 Score=90.26 Aligned_cols=96 Identities=24% Similarity=0.406 Sum_probs=68.8
Q ss_pred EecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCc---eEEEEeeeeceEEEEe-----ecCCC
Q psy11132 6 STVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAA---LSITHVDQYNSMLVID-----SVSAR 77 (243)
Q Consensus 6 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~~l~i~-----~~~~~ 77 (243)
+..||.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... ....... +..+.+. +++.+
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~-g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~v~~~ 82 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAE-GRPTPTIEWYKGGERVETDKDDPRSHRMLLP--SGSLFFLRIVHGRKSRP 82 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEE-EESCCEEEEEETTEECCCTTTCSSCSEEECT--TSCEEESSCCCBTTBCS
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECC-ccCCCeEEEEECCEeccccCCCCcceeEEec--CCcEEEEEEEeCCCCcC
Confidence 34678888888888899999999999995 788889999999988765321 1111111 2223333 55799
Q ss_pred CCeeEEEEEEeCCCcc-eeEEEEEEEcC
Q psy11132 78 HSGNYSCTVRNMVAED-TQVQRLIVNVP 104 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~~-~~~~~l~v~~~ 104 (243)
|+|.|+|.+.|..|.. +..+.|.+..+
T Consensus 83 D~G~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 83 DEGVYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEEC--
T ss_pred cCEEEEEEEEeCccceEeeeEEEEhhhh
Confidence 9999999999999874 55667776654
No 423
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.46 E-value=4.8e-14 Score=100.05 Aligned_cols=119 Identities=13% Similarity=0.151 Sum_probs=79.2
Q ss_pred CCCCCcEEEEEEeecCC---C-CCEEEEEeCCEecCCCCCeeEEeec----cceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 117 LPEGARTRVICGVTHGD---P-PLTIRWLKDGKPLSPRFPVNVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 117 ~~~g~~~~l~C~~~~~~---p-~~~~~W~~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
+.+|+++.|.|.+. +. | .+.+.|++++..+............ ...+.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 23 v~~G~~v~L~C~~~-g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 23 LMISLTPKVTCVVV-DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLP 101 (218)
T ss_dssp HCTTSCCEEEEEEE-EECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCS
T ss_pred hccCCCeeEEEEEc-CCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCC
Confidence 57899999999996 54 4 3799999999876543211111110 12357999999999999999999998765
Q ss_pred eeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 189 ARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 189 ~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
......+.. ......+|.+.+.+ ++.+.+.|...++ | .++|++||+.+
T Consensus 102 ~~~~~~v~~-~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 160 (218)
T 2rgs_A 102 SPIERTISK-IKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTE 160 (218)
T ss_dssp SCEEEEECC-CCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CcceEEEee-cCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEec
Confidence 411112211 00112566655432 5678899988774 3 79999999764
No 424
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=2.8e-13 Score=84.28 Aligned_cols=77 Identities=23% Similarity=0.444 Sum_probs=62.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+ |.+.+.|++++..+.....+.... ++....|.|.++..+|+|.|+|.|.| ....+.
T Consensus 18 ~~v~~G~~v~l~C~~-~~-~~~~v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~ 90 (103)
T 2edf_A 18 QWVAPGEDVELRCEL-SR-AGTPVHWLKDRKAIRKSQKYDVVC-EGTMAMLVIRGASLKDAGEYTCEVEA----SKSTAS 90 (103)
T ss_dssp EEECTTSCEEECCEE-SS-SSCCCCEEESSCBCCCSSSEEEEE-ETTEEEEEESSCCTTTCSEEEEECSS----CEEEEE
T ss_pred cEEcCCCCEEEEEEE-eC-CCCcEEEEECCEEccCCCCEEEEE-CCCEEEEEECCCCcccCEEEEEEEcc----CCcEEE
Confidence 567899999999999 46 778999999999987766554443 33367899999999999999999999 356677
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 91 l~V~ 94 (103)
T 2edf_A 91 LHVE 94 (103)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7777
No 425
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.45 E-value=4.6e-13 Score=94.82 Aligned_cols=121 Identities=18% Similarity=0.313 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEEEEeecCC-CCCEEEEEeCC--Eec--------------CC--CCCeeEEeeccceeEEEEeecCCCCC
Q psy11132 115 DGLPEGARTRVICGVTHGD-PPLTIRWLKDG--KPL--------------SP--RFPVNVSDLDSFSSLLSINSVSAAHS 175 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~~--~~~--------------~~--~~~~~~~~~~~~~~~l~i~~~~~~d~ 175 (243)
..+.+|+++.|.|.+ .+. |.+.+.|++.. ... .. ..+..... ......|.|.+++.+|+
T Consensus 10 ~~v~~G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~ 87 (218)
T 3s96_B 10 ASFSLGASAKLTCTL-NSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSISNIQPEDE 87 (218)
T ss_dssp EEEETTSCEEEEEEE-CGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-ETTEEEEEESSCCGGGC
T ss_pred EEECCCCcEEEEEEC-CCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-CCceEEEEEccCCcccC
Confidence 456789999999999 577 88999999832 100 00 01122211 33456799999999999
Q ss_pred eeEEEEEEccCc-----ceeeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc---c-ccceEEeCCeeE
Q psy11132 176 GEYTCVASNTAA-----QARYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF---E-QDSWMIDNENYV 238 (243)
Q Consensus 176 g~y~C~~~n~~g-----~~~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~---~-~~~W~~~~~~~~ 238 (243)
|.|.|.|.|..| .....+.|.|...+. .+|.+.+. .++.+.+.|..... + .+.|+++|..+.
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 165 (218)
T 3s96_B 88 AIYICGVGDTIKEQFVYVFGGGTKVTVLGQPK-STPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPIT 165 (218)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESCCC-BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC-
T ss_pred EEEEEEEecCCCCceeEEEcCcEEEEEecCCC-CCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECc
Confidence 999999999876 334456777764322 45555542 24578889987662 3 799999987653
No 426
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.45 E-value=6.6e-14 Score=98.51 Aligned_cols=119 Identities=13% Similarity=0.169 Sum_probs=78.5
Q ss_pred CCCCCcEEEEEEeecCCC----CCEEEEEeCCEecCCCCCeeE-Eeec---cceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 117 LPEGARTRVICGVTHGDP----PLTIRWLKDGKPLSPRFPVNV-SDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 117 ~~~g~~~~l~C~~~~~~p----~~~~~W~~~~~~~~~~~~~~~-~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
+..|+++.|.|.+. |.+ ...+.|++++..+........ .... ...+.|.|.+++.+|+|.|.|.|.|..+.
T Consensus 15 v~~G~~v~L~C~~~-g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVV-DISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEE-EECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEe-CcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 57899999999995 553 359999999977653211000 0000 11357999999999999999999998875
Q ss_pred eeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 189 ARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 189 ~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
......+.+. .....+|.+.+.+ ++.+.+.|....+ | .+.|++||+.+
T Consensus 94 ~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l 152 (207)
T 2vol_A 94 APIEKTISKT-KGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPA 152 (207)
T ss_dssp SCEEEEECCC-CCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred CceEEEeccC-CCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEec
Confidence 4222222210 0112566665432 5678899988764 2 79999998754
No 427
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.45 E-value=5.8e-13 Score=81.53 Aligned_cols=76 Identities=24% Similarity=0.408 Sum_probs=63.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+ .+.+.|++++..+......... ...|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 11 ~~v~~G~~~~l~C~~-~~--~p~v~W~k~g~~~~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (95)
T 4hwu_A 11 YVVAPGESLELQCML-KD--AAVISWTKDGVHLGPNNRTVLI-----GEYLQIKGATPRDSGLYACTAARTVDSETWIFM 82 (95)
T ss_dssp EEECTTSCEEEECCC-CT--TCEEEEEETTEEECCCSSEEEE-----TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEECCCCEEEEEEEe-CC--CCEEEEEECCEECCCCceEEEe-----CCEEEECcCCcccCEEEEEEEccCCCcEEEEEE
Confidence 446789999999998 45 5799999999998766544332 357999999999999999999999998888888
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
+.|.
T Consensus 83 l~V~ 86 (95)
T 4hwu_A 83 VNVT 86 (95)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8887
No 428
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.45 E-value=6.9e-13 Score=95.76 Aligned_cols=122 Identities=17% Similarity=0.257 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEe----------------CCEecCCC---CCeeEEeeccceeEEEEeecCCCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLK----------------DGKPLSPR---FPVNVSDLDSFSSLLSINSVSAAHS 175 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~----------------~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~ 175 (243)
..+.+|+++.|.|.+ .+.+.+.+.|++ ++...... .+............|.|.+++.+|+
T Consensus 11 ~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 11 VISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEEETTSCEEEEEEE-SSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEEeCCCcEEEEeEe-cCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 346789999999999 578889999998 22222211 2222222223456899999999999
Q ss_pred eeEEEEEEccCc----ceeeeEEEEEEeec-CCCCCeeeee--------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 176 GEYTCVASNTAA----QARYSSKLQVKGNL-NRLPPSYTLV--------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 176 g~y~C~~~n~~g----~~~~~~~l~v~~~~-~~~~p~~~~~--------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
|.|.|.+.+..+ .......+.|.... ...+|.+.+. .++.+.+.|..... + .+.|++||..+
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l 168 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 168 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEEC
Confidence 999999998654 22244566666321 1235554432 26788899987653 2 79999998765
No 429
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=2.9e-13 Score=84.29 Aligned_cols=78 Identities=14% Similarity=0.230 Sum_probs=62.5
Q ss_pred CCCCCCCcEEEEEEeecCCC-CCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ .+.| ++.+.|+++|..+....++.... ++....|.|.+++.+|+|.|+|.|.| ...++
T Consensus 18 ~~v~~G~~v~l~C~v-~~~~~~~~v~W~k~g~~i~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~a 91 (104)
T 2eny_A 18 MEVLEGESCSFECVL-SHESASDPAMWTVGGKTVGSSSRFQATR-QGRKYILVVREAAPSDAGEVVFSVRG----LTSKA 91 (104)
T ss_dssp EEEESSCCEEEEEEC-SSCCCSSCBCCBSSSSBCSBCSSCEEEE-ETTEEEEEECSCCTTTCSCEEEEETT----EEEEE
T ss_pred cEEcCCCcEEEEEEE-cCCCCCceeEEEECCEECCCCCCEEEEE-cCCEEEEEECCCCHHHCEEEEEEECC----eeEEE
Confidence 567899999999999 5666 45899999999988766554432 33457899999999999999999855 56778
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.|.|.
T Consensus 92 ~L~V~ 96 (104)
T 2eny_A 92 SLIVR 96 (104)
T ss_dssp CEEEE
T ss_pred EEEEe
Confidence 88888
No 430
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=3.7e-13 Score=84.20 Aligned_cols=79 Identities=22% Similarity=0.323 Sum_probs=62.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ .+.|.+ +.|++++..+.......... +.....|.|.++..+|+|.|+|.|.|. .....+.
T Consensus 18 ~~v~~G~~v~l~C~~-~~~~~~-v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~ 92 (106)
T 2dlt_A 18 LTVKAAEQAVFKCEV-SDEKVT-GKWYKNGVEVRPSKRITISH-VGRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSAK 92 (106)
T ss_dssp EEEESSCCEECCCEE-SCSSCE-EEEEESSCBCCCCSSCEEEE-ETTEEEEEESSCCTTTCSCEEEEEETS--CCCCCBC
T ss_pred eEEeCCCeEEEEEEE-cCCCcc-eEEEcCCEECcCCCCEEEEE-eCCEEEEEECCCCcCCCEEEEEEEccC--CceEEEE
Confidence 557789999999999 577766 99999999987766554432 334578999999999999999999998 4445556
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 93 l~V~ 96 (106)
T 2dlt_A 93 LNFL 96 (106)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 431
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.44 E-value=1.6e-13 Score=95.97 Aligned_cols=119 Identities=19% Similarity=0.202 Sum_probs=81.0
Q ss_pred CCCCCCcEEEEEEeec---CCCCCEEEEEeCCEecCCC------------CCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 116 GLPEGARTRVICGVTH---GDPPLTIRWLKDGKPLSPR------------FPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~---~~p~~~~~W~~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
.+..|+++.|.|.+.. +.|.+.+.|++++..+... .+... .......|.|.+++.+|+|.|.|
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~--~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF--DITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE--ESTTTTEEEECSCCGGGCEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE--ccCCCcEEEEecccchhCeEEEE
Confidence 4568999999998842 2356799999998865210 00111 11224679999999999999999
Q ss_pred EEEccCccee-----eeEEEEEEeecCCCCCeeeee---ccceeeeccCcc-cc--cccceEEeCCeeE
Q psy11132 181 VASNTAAQAR-----YSSKLQVKGNLNRLPPSYTLV---FSQASYMSTSYY-SF--EQDSWMIDNENYV 238 (243)
Q Consensus 181 ~~~n~~g~~~-----~~~~l~v~~~~~~~~p~~~~~---~~~~~~~~~~~~-~~--~~~~W~~~~~~~~ 238 (243)
.|.|..|... ..+.|.|.... .+|.+... .++.+.+.|... .. +.++|+++|+.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~--~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~ 149 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADF--PTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELN 149 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCC--CCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCC--CCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECc
Confidence 9999876542 45666666322 34555442 355778999874 44 4899999987653
No 432
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=5e-13 Score=83.27 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=61.4
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
.+.+|+.+.|.|.+ .+.|.+ +.|++++..+.......... ......|.|.+++.+|+|.|+|.|.|.. ..+.|
T Consensus 21 ~v~~G~~v~l~C~~-~~~p~~-v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~n~~----~~~~l 93 (104)
T 2e6p_A 21 TFTTSERVVLTCEL-SRVDFP-ATWYKDGQKVEESELLVVKM-DGRKHRLILPEAKVQDSGEFECRTEGVS----AFFGV 93 (104)
T ss_dssp EEESSSCEECCEEC-SSTTCC-CEEEETTEECCCBTTBEEEE-ETTEEEEEESSCCTTTCEEEEEECSSCC----CCEEE
T ss_pred EEeCCCcEEEEEEe-cCCCCc-cEEeeCCEECCCCCCEEEEe-CCCEEEEEECCCChhhCEEEEEEECCce----EEEEE
Confidence 56789999999999 688877 99999999988665554432 3345789999999999999999999863 36677
Q ss_pred EEE
Q psy11132 196 QVK 198 (243)
Q Consensus 196 ~v~ 198 (243)
.|.
T Consensus 94 ~V~ 96 (104)
T 2e6p_A 94 TVQ 96 (104)
T ss_dssp EEE
T ss_pred EEc
Confidence 777
No 433
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.44 E-value=1.5e-13 Score=96.94 Aligned_cols=98 Identities=26% Similarity=0.426 Sum_probs=75.2
Q ss_pred eeEEEecCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCe--eecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 2 LVIFSTVPPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGR--YLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 2 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
+.|.|..+|.+........+.+|+.+.|.|.+..+.|.+.+.|++++. .+...... ......|.|.+++.+|+
T Consensus 114 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~ 188 (214)
T 3jz7_A 114 FLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA-----EMTSPVISVKNASSEYS 188 (214)
T ss_dssp EEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG-----GTTSSEEEECSCCGGGC
T ss_pred EEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee-----ccCCCEEEEecCCHHHC
Confidence 467888888876655555688999999999985588889999999543 33322111 11145899999999999
Q ss_pred eeEEEEEEeCCCcceeEEEEEEEcC
Q psy11132 80 GNYSCTVRNMVAEDTQVQRLIVNVP 104 (243)
Q Consensus 80 G~Y~C~~~~~~~~~~~~~~l~v~~~ 104 (243)
|.|+|.|.|..+.....+.|.|..|
T Consensus 189 G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 189 GTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp EEEEEEEECSSCEEEEEEEECCBCC
T ss_pred EEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 9999999999998888888887644
No 434
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.44 E-value=3.8e-12 Score=105.87 Aligned_cols=179 Identities=16% Similarity=0.203 Sum_probs=118.2
Q ss_pred cCCCccCCCCCcccccCCeEEEEEEeeCCCCCceeE-EE--ECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 8 VPPKLSPTNPERTLNVGERASLICSITKGDIPLTIK-WL--KDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 8 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~-W~--~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
.||.+. .+.+..+.+|+++.|.|.+. +.|.+.+. |+ ++|..+....... .......+.|.|.+++..|.|.|+|
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~-g~P~p~i~~W~~~~~g~~l~~~~~~~-~~~~~~~~~l~I~~~~~~d~g~Y~c 240 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAI-GRTVAGDRLWLQGIDVRDAPLKEIKV-TSSRRFIASFNVVNTTKRDAGKYRC 240 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEE-SCCCTTCEEEEEESSSCCEEEEEEEE-CCSSEEEEEEEECSCCTTTCEEEEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeC-CCCCCceeEEEecCCCccccccceEE-eccccceEEEEEcccccccCeEEEE
Confidence 467666 45578899999999999995 88888887 88 6776664322111 1111224789999999999999999
Q ss_pred EEEeCCCc-ceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeec--C-CCCC--EEEEEeCCEecCCCCCeeEEee
Q psy11132 85 TVRNMVAE-DTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTH--G-DPPL--TIRWLKDGKPLSPRFPVNVSDL 158 (243)
Q Consensus 85 ~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~--~-~p~~--~~~W~~~~~~~~~~~~~~~~~~ 158 (243)
.|.|..|. .+....|.|..+|.++..+.. .......+.|.|.... | .+.. .+.|...+.. .... .
T Consensus 241 ~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~--~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~------~~~~-~ 311 (731)
T 2v5y_A 241 MIRTEGGVGISNYAELVVKEPPVPIAPPQL--ASVGATYLWIQLNANSINGDGPIVAREVEYCTASGS------WNDR-Q 311 (731)
T ss_dssp EEEETTEEEECCCEEEEEECCCCBSSCCEE--EEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS------CEEE-E
T ss_pred EEECCCCCcceeeEEEEEecCCCCCCCcce--eccCCceEEEEeCCcccCCCCccEEEEEEEEECCCC------ceEE-e
Confidence 99999987 677788888887765432211 1123567888886521 2 1222 4556554211 1111 1
Q ss_pred ccceeEEEEeecCCCCCeeEEEEEE--ccCcceeeeEEEEEE
Q psy11132 159 DSFSSLLSINSVSAAHSGEYTCVAS--NTAAQARYSSKLQVK 198 (243)
Q Consensus 159 ~~~~~~l~i~~~~~~d~g~y~C~~~--n~~g~~~~~~~l~v~ 198 (243)
......+.|.++...+...|.|.|. |..|....+..+.+.
T Consensus 312 ~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~ 353 (731)
T 2v5y_A 312 PVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTR 353 (731)
T ss_dssp ECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEE
T ss_pred ccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEee
Confidence 1223668899999888889999999 998876544434443
No 435
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.43 E-value=1e-13 Score=96.76 Aligned_cols=121 Identities=18% Similarity=0.219 Sum_probs=81.7
Q ss_pred CCCCCCCcEEEEEE-eecCCCC-CEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceee-
Q psy11132 115 DGLPEGARTRVICG-VTHGDPP-LTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY- 191 (243)
Q Consensus 115 ~~~~~g~~~~l~C~-~~~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~- 191 (243)
..+.+|+.+.|.|. + .+.|. +.+.|++++..+......... .......|.|.++..+|+|.|+|.+.|..+....
T Consensus 18 ~~v~~G~~v~L~C~~~-~~~p~~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 95 (201)
T 3s97_C 18 VRVKEGKGMVLLCDPP-YHFPDDLSYRWLLNEFPVFITMDKRRF-VSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVF 95 (201)
T ss_dssp EEEETTCCEEECCCCC-SEESSCCEEEEEESSTTCBCCCSSSEE-ECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEE
T ss_pred EEEECCCCEEEecccc-ccCCCceEEEEEECCceeeeeeCCCeE-EEcCCCeEEECcCCcccCeEEEEEEEecCCCcchh
Confidence 55788999999999 6 67888 999999998776422111111 1122466999999999999999999997765443
Q ss_pred --eEEEEEEee--cCCCCC-------eeeeeccceeeeccCcccc--cccceEEeCCee
Q psy11132 192 --SSKLQVKGN--LNRLPP-------SYTLVFSQASYMSTSYYSF--EQDSWMIDNENY 237 (243)
Q Consensus 192 --~~~l~v~~~--~~~~~p-------~~~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~ 237 (243)
.+.+.+... ....+| ...+..+..+.+.|..... +.+.|++++..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~ 154 (201)
T 3s97_C 96 SKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM 154 (201)
T ss_dssp CCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCC
T ss_pred hcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcC
Confidence 233333211 011122 3445567778888976554 489999998644
No 436
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.42 E-value=2.1e-13 Score=92.89 Aligned_cols=115 Identities=14% Similarity=0.058 Sum_probs=79.3
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC--ee-------EEeeccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP--VN-------VSDLDSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~--~~-------~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
.+..|++++|.|.+ .+ |.+.+.|++++..+..... .. .......+..|.|.+++.+|+|.|.|.|.|..
T Consensus 6 ~~~~G~~VtL~c~~-~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 6 YGVVYGNVTFHVPS-NV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT 83 (171)
T ss_dssp EEETTCCEEECCCC-SS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred EEEcCCCEEEcCCC-CC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence 35689999999988 34 8889999998874321100 00 01111234679999999999999999999987
Q ss_pred cceeeeEEEEEEeecCCCCCeeeeeccceeeeccCccc--ccccceEEeCCee
Q psy11132 187 AQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYS--FEQDSWMIDNENY 237 (243)
Q Consensus 187 g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~W~~~~~~~ 237 (243)
| ...+.|.|...+ ..|.+...... ..+.|.... -+.+.|+++|+.+
T Consensus 84 ~--~~~~~L~V~~~~--~~p~i~~~~~~-~~L~C~~~~~p~p~i~W~~~~~~l 131 (171)
T 1ccz_A 84 D--TMKFFLYVLEMV--SKPMIYWECSN-ATLTCEVLEGTDVELKLYQGKEHL 131 (171)
T ss_dssp S--CEEEEEEEECCC--CCCEEEEETTT-TEEEEECSSCSSCEEEEEETTEEE
T ss_pred C--cEEEEEEEECcC--CCCEEEEecCC-cEEEEEeCCCCCcEEEEEECCEEC
Confidence 7 566777776332 34555544433 367887654 3589999998765
No 437
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.42 E-value=8.9e-13 Score=94.40 Aligned_cols=120 Identities=18% Similarity=0.251 Sum_probs=78.9
Q ss_pred CCCCCCCcEEEEEEeecCCC-CC-EEEEEeCCE--ec----------C--CCCCeeEEeeccceeEEEEeecCCCCCeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDP-PL-TIRWLKDGK--PL----------S--PRFPVNVSDLDSFSSLLSINSVSAAHSGEY 178 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p-~~-~~~W~~~~~--~~----------~--~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 178 (243)
..+.+|+++.|.|.+. +.+ .+ .+.|++++. .+ . ...++.... ......|.|.+++.+|+|.|
T Consensus 29 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y 106 (234)
T 2j6e_L 29 ASGTPGQRVTISCSGS-SSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK-SGTSASLAISGLRSEDEADY 106 (234)
T ss_dssp CCBCTTCEEEEEEECC-TTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE-ETTEEEEEEESCCSTTCSEE
T ss_pred EEeeCCCcEEEEEEec-CCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe-cCCeEEEEECCCCHHHCEEE
Confidence 5678999999999984 543 34 799998632 11 0 011222221 23456899999999999999
Q ss_pred EEEEEccCcc---eeeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 179 TCVASNTAAQ---ARYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 179 ~C~~~n~~g~---~~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.|.|.|..+. ....+.+.|...+ ..+|.+.+. .++.+.+.|..... | .++|++||..+
T Consensus 107 ~C~~~~~~~~~~~~~~~~~l~V~~~~-~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l 178 (234)
T 2j6e_L 107 YCATWDDSLSAVIFGGGTKLTVLGQP-KAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPV 178 (234)
T ss_dssp EEEEEETTTTEEEECCCBCCCBCCCC-CCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEEC
T ss_pred EEEEEcCCcceeEecCCEEEEEecCC-CCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEEC
Confidence 9999998772 2234455553221 145554432 25678899988654 2 79999998764
No 438
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.42 E-value=3.2e-12 Score=92.23 Aligned_cols=122 Identities=20% Similarity=0.293 Sum_probs=80.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--Eec--------------CCCCCeeEEeeccceeEEEEeecCCCCCeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPL--------------SPRFPVNVSDLDSFSSLLSINSVSAAHSGEY 178 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~--------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 178 (243)
..+.+|+++.|.|.+ .+.+.+.+.|++.. ... ....+............|.|.+++.+|+|.|
T Consensus 11 v~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (245)
T 3nfj_J 11 LVQPVGSPLSLECTV-EGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFY 89 (245)
T ss_dssp EEEETTCCEEEEEEE-ESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEecCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEE
Confidence 446789999999999 47888999999822 100 0011222222223456899999999999999
Q ss_pred EEEEEccCc------ceeeeEEEEEEeec-CCCCCeeeeec--------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 179 TCVASNTAA------QARYSSKLQVKGNL-NRLPPSYTLVF--------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 179 ~C~~~n~~g------~~~~~~~l~v~~~~-~~~~p~~~~~~--------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.|.+.|..| .......+.|.... ...+|.+.+.. ++.+.+.|....+ + .+.|++||..+
T Consensus 90 ~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l 167 (245)
T 3nfj_J 90 LCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEV 167 (245)
T ss_dssp EEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEEC
Confidence 999999332 22344567776321 22356654322 6778899988764 2 68899998765
No 439
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.41 E-value=1.1e-12 Score=92.72 Aligned_cols=105 Identities=16% Similarity=0.251 Sum_probs=70.4
Q ss_pred eEEEec--CCCccCCCC-CcccccCCeEEEEEEeeCC-CCCceeEEEECCeeecCCCc-eEEEEe------eeeceEEEE
Q psy11132 3 VIFSTV--PPKLSPTNP-ERTLNVGERASLICSITKG-DIPLTIKWLKDGRYLDNSAA-LSITHV------DQYNSMLVI 71 (243)
Q Consensus 3 ~l~v~~--~p~~~~~~~-~~~~~~g~~~~l~C~~~~~-~~~~~v~W~~~~~~~~~~~~-~~~~~~------~~~~~~l~i 71 (243)
.|.+.. +|.+...+. ...+.+|++++|.|.+.+. .+.+.+.|++++..+..... ...... ....+.|.|
T Consensus 96 ~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 175 (213)
T 2x1w_L 96 IVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTI 175 (213)
T ss_dssp EEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEE
T ss_pred EEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEE
Confidence 444433 344444333 3478999999999999632 23458999999876432211 000000 122467999
Q ss_pred eecCCCCCeeEEEEEEeCCCcceeEEEEEEEcCCCc
Q psy11132 72 DSVSARHSGNYSCTVRNMVAEDTQVQRLIVNVPPKI 107 (243)
Q Consensus 72 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~p~~ 107 (243)
.+++.+|+|.|+|.+.|..|..+..+.|.|.++|.+
T Consensus 176 ~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 176 DGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred CCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 999999999999999999999889999999887754
No 440
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.41 E-value=2.4e-12 Score=92.22 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=82.7
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE--e-----------c-CCCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK--P-----------L-SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~--~-----------~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+ .+.+.+.+.|++.+. . . ....++... .......|.|.+++.+|+|.|.|
T Consensus 34 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 111 (237)
T 3sob_L 34 LSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS-GSGTDFTLTISSLQPEDFATYYC 111 (237)
T ss_dssp EEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCEEEEE
T ss_pred EEEeCCCcEEEEEec-CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEE-cCCCEEEEEECCCChhhCeEEEE
Confidence 456789999999999 577889999998421 1 0 111222222 23346789999999999999999
Q ss_pred EEEccCcce-eeeEEEEEEeecCCCCCeeeee-------ccceeeeccCccc-c---cccceEEeCCeeE
Q psy11132 181 VASNTAAQA-RYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYS-F---EQDSWMIDNENYV 238 (243)
Q Consensus 181 ~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~-~---~~~~W~~~~~~~~ 238 (243)
.+.|..+.. .....+.|.. ...+|.+.+. .++.+.+.|.... . +.+.|+++|..+.
T Consensus 112 ~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~ 179 (237)
T 3sob_L 112 QQSYTTPPTFGQGTKVEIKR--TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 179 (237)
T ss_dssp EECSSSSCEECCCEEEEEEC--CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred eeccCCceEEcCcEEEEEec--CCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCC
Confidence 999877532 3445666653 2356666543 2567889998765 2 4899999987653
No 441
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.41 E-value=2e-12 Score=91.18 Aligned_cols=120 Identities=15% Similarity=0.210 Sum_probs=80.7
Q ss_pred CCCCCCCcEEEEEEeecCCC---CCEEEEEeCC--Eec------------CCCCCeeEEeeccceeEEEEeecCCCCCee
Q psy11132 115 DGLPEGARTRVICGVTHGDP---PLTIRWLKDG--KPL------------SPRFPVNVSDLDSFSSLLSINSVSAAHSGE 177 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p---~~~~~W~~~~--~~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 177 (243)
..+.+|+++.|.|.+ .+.| .+.+.|++++ ..+ ....++.... ......|.|.+++.+|+|.
T Consensus 10 ~~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 10 LTTSPGETVTLTCRS-STGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp EEECTTCCEEEEEEE-SSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEE
T ss_pred EeecCCCCEEEEEEe-cccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-eCCEEEEEECCCCccCCEE
Confidence 456789999999999 5666 4789999853 221 1112222221 2335689999999999999
Q ss_pred EEEEEEccCcce-eeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 178 YTCVASNTAAQA-RYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 178 y~C~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
|.|.|.|..+.. .....+.|.... ..+|.+.+. .++.+.+.|....+ + .+.|+++|..+
T Consensus 88 Y~C~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l 158 (212)
T 1q0x_L 88 YFCALWSNNKLVFGGGTKLTVLGQP-KSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPV 158 (212)
T ss_dssp EEEEEECSSCEEECCCEEEEECCSC-CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred EEEEEecCchhhcCCCeEEEEecCC-CCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeC
Confidence 999999987643 234556664221 146666553 35688899987664 2 79999998654
No 442
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.41 E-value=1.6e-12 Score=91.95 Aligned_cols=120 Identities=16% Similarity=0.225 Sum_probs=80.2
Q ss_pred CCCCCCCcEEEEEEeecCCC-CCEEEEEeCCE--ecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDP-PLTIRWLKDGK--PLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYT 179 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 179 (243)
..+.+|+++.|.|.+..+.+ .+.+.|++++. .+. ...+..... ......|.|.+++.+|+|.|.
T Consensus 10 ~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~ 88 (216)
T 2xzc_L 10 VSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-SGTSATLGITGLQTGDEADYY 88 (216)
T ss_dssp EEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-cCCEEEEEECCCCcccCEEEE
Confidence 45678999999999534443 57999998532 110 011222221 333568999999999999999
Q ss_pred EEEEccCc--ceeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 180 CVASNTAA--QARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 180 C~~~n~~g--~~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
|.|.|..+ .......+.|.. ...+|.+.+.+ ++.+.+.|....+ | .+.|+++|..+
T Consensus 89 C~~~~~~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 157 (216)
T 2xzc_L 89 CGTWDSSLNPVFGGGTKLEIKR--TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ 157 (216)
T ss_dssp EEEECTTSCEEEBCCEEEEECC--CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred EEEEeCCCcceECCCEEEEEcC--CCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeec
Confidence 99999876 223345566642 22466665532 5688999987663 2 69999998754
No 443
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.41 E-value=9.2e-12 Score=100.11 Aligned_cols=166 Identities=13% Similarity=0.205 Sum_probs=102.5
Q ss_pred cccCCeEEEEEEeeCCCCC---ceeEEEECCeeecCCCc-eEEEE---eeeeceEEEEeecCCCCCeeEEEEEEeCCCcc
Q psy11132 21 LNVGERASLICSITKGDIP---LTIKWLKDGRYLDNSAA-LSITH---VDQYNSMLVIDSVSARHSGNYSCTVRNMVAED 93 (243)
Q Consensus 21 ~~~g~~~~l~C~~~~~~~~---~~v~W~~~~~~~~~~~~-~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 93 (243)
+..+..+.|.|.+.+..+. +.|+|++++..+..... ..... .-...+.|.|......|.+.|+|.+.+.....
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~ 434 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 434 (551)
T ss_pred eeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCC
Confidence 5578889999999765554 68999999876542111 00000 01123568888777778899999999876632
Q ss_pred --eeEEEEEE--EcCCCccccccCCCCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecCCCCCeeEE-eeccc---eeE
Q psy11132 94 --TQVQRLIV--NVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVS-DLDSF---SSL 164 (243)
Q Consensus 94 --~~~~~l~v--~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~~~~~~~~~-~~~~~---~~~ 164 (243)
...+.+.+ ..+|.+...... .....|+.+.|.|.+.+.+|+ ..++|+++|..+......... ..++. .+.
T Consensus 435 ~~~~~~~~~~~~~~~P~V~~~~~~-~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~ 513 (551)
T 1ntl_A 435 PIEKTISKTKGRPKAPQLYTIPPP-KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSK 513 (551)
T ss_pred CeEEEEecCCCCCcCCceEEeCCC-hhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccceeCCCCCEEEEEE
Confidence 22333332 345555443322 234568999999999655664 699999999987532111111 11111 233
Q ss_pred EEEeecCCCCCeeEEEEEEccCc
Q psy11132 165 LSINSVSAAHSGEYTCVASNTAA 187 (243)
Q Consensus 165 l~i~~~~~~d~g~y~C~~~n~~g 187 (243)
|.+.....++.+.|+|.|.+...
T Consensus 514 l~v~~~~~~~~~~ytC~V~h~~l 536 (551)
T 1ntl_A 514 LNVQKSNWEAGNTFTCSVLHEGL 536 (551)
T ss_pred EEEcHHHcCCCCeEEEEEEECCC
Confidence 55554444567899999998754
No 444
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=9.9e-14 Score=86.01 Aligned_cols=77 Identities=18% Similarity=0.333 Sum_probs=60.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC----CeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 190 (243)
..+.+|+.+.|.|.+ .+.| +.+.|++++..+.... .+... .++....|.|.++..+|+|.|+|.|.| ..
T Consensus 18 ~~v~~G~~v~l~C~~-~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~ 90 (101)
T 2edk_A 18 QQVFVGDRVEMAVEV-SEEG-AQVMWMKNGVELTREDSFKARYRFK-KDGKRHILIFSDVVQEDRGRYQVITNG----GQ 90 (101)
T ss_dssp EEEESSCCCBCCEEE-SCSS-CCCEEEESSCBCCCSCCSSCCCEEE-ECSSEEEEECSSCCGGGCSBEEEECSS----CE
T ss_pred eEEcCCCCEEEEEEE-eCCC-CEEEEEECCEECCCCCCcceeEEEE-ECCCEEEEEECCCChhhCEEEEEEEcC----Cc
Confidence 557789999999999 5777 8999999999887654 22333 334457899999999999999999987 34
Q ss_pred eeEEEEEE
Q psy11132 191 YSSKLQVK 198 (243)
Q Consensus 191 ~~~~l~v~ 198 (243)
..+.|.|.
T Consensus 91 ~~~~l~V~ 98 (101)
T 2edk_A 91 CEAELIVE 98 (101)
T ss_dssp ECCBEEEE
T ss_pred EEEEEEEe
Confidence 55667776
No 445
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.41 E-value=1.8e-12 Score=80.57 Aligned_cols=77 Identities=18% Similarity=0.312 Sum_probs=62.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+++.|.|.+ .+.|.+ +.|++++..+.....+... .+.....|.|.+++.+|+|.|+|. .|.....+.
T Consensus 18 ~~v~~G~~v~l~C~~-~~~p~~-v~W~k~~~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~ 90 (103)
T 2e7b_A 18 LEVLEGGAATLRCVL-SSVAAP-VKWCYGNNVLRPGDKYSLR-QEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSAT 90 (103)
T ss_dssp EEEESSSCEEEEEEC-SSCCCS-CEEEESSSBCCCSSSEEEE-ECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBC
T ss_pred EEEECCCcEEEEEEE-eCCCCC-eEEEECCEECCCCCcEEEE-EcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEE
Confidence 557789999999999 688888 9999999988766555443 334456799999999999999998 566777788
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 91 l~V~ 94 (103)
T 2e7b_A 91 LTVT 94 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8888
No 446
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.41 E-value=1.8e-12 Score=91.98 Aligned_cols=116 Identities=12% Similarity=0.171 Sum_probs=78.3
Q ss_pred CCCCCCcEEEEEEeecCCC-----CCEEEEEeCCEecC---------CC------CCeeEEee--ccceeEEEEeecCCC
Q psy11132 116 GLPEGARTRVICGVTHGDP-----PLTIRWLKDGKPLS---------PR------FPVNVSDL--DSFSSLLSINSVSAA 173 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p-----~~~~~W~~~~~~~~---------~~------~~~~~~~~--~~~~~~l~i~~~~~~ 173 (243)
.+..|+.+.|.|.+ .+.| ...+.|++++..+. .. .+...... ......|.|.+++.+
T Consensus 12 ~~~~G~~v~L~C~~-~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 90 (222)
T 3sbw_C 12 VVEYGSNMTIECKF-PVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ 90 (222)
T ss_dssp EEETTSCEEEEEEC-CCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG
T ss_pred EEEcCCcEEEEeEe-cCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc
Confidence 45689999999998 4555 34899999753221 00 11111100 112468999999999
Q ss_pred CCeeEEEEEEccCcceeeeEEEEEEeecCCCCCee----eeeccceeeeccCccccc--ccceEEeCC
Q psy11132 174 HSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSY----TLVFSQASYMSTSYYSFE--QDSWMIDNE 235 (243)
Q Consensus 174 d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~--~~~W~~~~~ 235 (243)
|+|.|+|.|.| .+.....+.|.|...+ ..|.. ....+..+.+.|...+.| .+.|++++.
T Consensus 91 D~G~Y~C~~~~-~~~~~~~~~l~V~~~~--~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g 155 (222)
T 3sbw_C 91 DAGVYRCMISY-GGADYKRITVKVNAPY--NKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDH 155 (222)
T ss_dssp GCEEEEEEEES-SSEEEEEEEEEEEBCC--CCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTC
T ss_pred cCeEEEEEEEe-CCCceeEEEEEEECCC--CCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCC
Confidence 99999999999 6666677788887322 22222 234577889999876654 899999843
No 447
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.41 E-value=1.7e-12 Score=93.48 Aligned_cols=117 Identities=9% Similarity=0.088 Sum_probs=80.6
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcce--eeeE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSS 193 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~--~~~~ 193 (243)
.+.+|++++|.|.+. + +...+.|+|++..+...... .........|.|.+++.+|+|.|+|.+.|..+.. +..+
T Consensus 17 ~v~~G~~VtL~C~~~-~-~~~~~~w~k~g~~~~~~~~~--~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~ 92 (242)
T 1p6f_A 17 MVPKEKQVTICCQGN-Y-GAVEYQLHFEGSLFAVDRPK--PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL 92 (242)
T ss_dssp EEETTCCEEEEEECC-T-TCCEEEEEETTEEEEEECCS--SCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred ccCCCCcEEEEEeeC-C-CCcEEEEEECCCcccccccc--ccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcce
Confidence 567899999999983 3 46799999999865411000 0011235679999999999999999998865533 4456
Q ss_pred EEEEEeecCCCCCee------eeeccceeeeccCcccc-cccceEEeCCeeE
Q psy11132 194 KLQVKGNLNRLPPSY------TLVFSQASYMSTSYYSF-EQDSWMIDNENYV 238 (243)
Q Consensus 194 ~l~v~~~~~~~~p~~------~~~~~~~~~~~~~~~~~-~~~~W~~~~~~~~ 238 (243)
.|.|.+.. .+|.+ .+..++.+.+.|..... +.+.|+|+|+.+.
T Consensus 93 ~L~V~~~~--~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~ 142 (242)
T 1p6f_A 93 DLVVTEMY--DTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSH 142 (242)
T ss_dssp EEEEECCS--CCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCE
T ss_pred EEEeeccc--CCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccC
Confidence 77776422 23443 34567788889976533 4899999987543
No 448
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.40 E-value=5.7e-13 Score=95.15 Aligned_cols=120 Identities=13% Similarity=0.187 Sum_probs=80.2
Q ss_pred CCCCCCCcEEEEEEeecCCCC-CEEEEEeCCEecC---------CCCCeeEEee----------ccceeEEEEeecCCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLS---------PRFPVNVSDL----------DSFSSLLSINSVSAAH 174 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~~~~~~---------~~~~~~~~~~----------~~~~~~l~i~~~~~~d 174 (243)
..+.+|+.+.|.|.+ .+.+. +.+.|++++.... ....+..... ....+.|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~D 88 (231)
T 2pet_A 10 VEVMRGKSVILDCTP-TGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGD 88 (231)
T ss_dssp EEEETTCCEEECCCC-BSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGGG
T ss_pred EEEEcCCCEEEeccc-CCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCccc
Confidence 456789999999999 57774 8999998654322 0000000000 1112349999999999
Q ss_pred CeeEEEEEEccC-cceeeeEEEEEEeecCCCCCeeee-------ecccee-eeccCc-ccc--cccceEEeCCee
Q psy11132 175 SGEYTCVASNTA-AQARYSSKLQVKGNLNRLPPSYTL-------VFSQAS-YMSTSY-YSF--EQDSWMIDNENY 237 (243)
Q Consensus 175 ~g~y~C~~~n~~-g~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~-~~~~~~-~~~--~~~~W~~~~~~~ 237 (243)
+|.|+|.|.+.. +.....+.|.|...+ ..|.+.. ..+... .+.|.. ... +.+.|+++|..+
T Consensus 89 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~p--~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~ 161 (231)
T 2pet_A 89 ERDYVCVVRAGAAGTAEATARLNVFAKP--EATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRL 161 (231)
T ss_dssp CEEEEEEEECGGGCEEEEEEEEEEEBCC--CCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEEC
T ss_pred CceEEEEEEecCCCceEEEEEEEEEecC--CCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccC
Confidence 999999999987 777777888887432 2244332 234445 889977 443 589999998764
No 449
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=2.1e-12 Score=81.72 Aligned_cols=85 Identities=22% Similarity=0.356 Sum_probs=65.9
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
.+..|+.+.|.|.+ . .|.+.+.|++++..+.......... +.....|.|.++..+|+|.|+|.|.| ....+.|
T Consensus 24 ~~~~G~~v~L~C~~-~-~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l 96 (113)
T 2cpc_A 24 AAVRLERVVLTCEL-C-RPWAEVRWTKDGEEVVESPALLLQK-EDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTV 96 (113)
T ss_dssp EEETTCCEEEEEEE-S-CTTCCCEEEETTEECCCBTTBEEEE-CSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEE
T ss_pred EEEcCCeEEEEEEe-c-CCCCeEEEEECCEECccCCCEEEEE-CCCEEEEEECCCCcccCEEEEEEEec----CcEEEEE
Confidence 45689999999998 3 7888999999999987665544432 23346899999999999999999998 5567788
Q ss_pred EEEeecCCCCCeeeeec
Q psy11132 196 QVKGNLNRLPPSYTLVF 212 (243)
Q Consensus 196 ~v~~~~~~~~p~~~~~~ 212 (243)
.|. .+|...+.+
T Consensus 97 ~V~-----~~p~~~~~p 108 (113)
T 2cpc_A 97 TVT-----EPPVRIIYS 108 (113)
T ss_dssp EEE-----CCCCCCCCC
T ss_pred EEe-----cCCchhccC
Confidence 888 566544433
No 450
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.40 E-value=2.4e-13 Score=98.25 Aligned_cols=118 Identities=17% Similarity=0.259 Sum_probs=80.1
Q ss_pred CCCCCCCcEEEEEEeecC---CCCCEEEEEeCCEecCC------------------------------CCCeeEEeeccc
Q psy11132 115 DGLPEGARTRVICGVTHG---DPPLTIRWLKDGKPLSP------------------------------RFPVNVSDLDSF 161 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~---~p~~~~~W~~~~~~~~~------------------------------~~~~~~~~~~~~ 161 (243)
..+.+|+.+.|.|.+. + .|.+.+.|++++..... ..+.... ...
T Consensus 12 v~v~~G~~v~L~C~~~-~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~ 88 (250)
T 2fbo_J 12 VEVHAGGTVELPCSYQ-LANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA--NLA 88 (250)
T ss_dssp EEECTTSCEEECCEEE-ECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS--CTT
T ss_pred eEEecCCeEEEEEEeE-cCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec--cCC
Confidence 4567899999999984 5 77889999998754310 0000000 001
Q ss_pred eeEEEEeecCCCCCeeEEEEEEccCcce-----eeeEEEEEEeecCCCCCe--------eeeeccceeeeccCcccc--c
Q psy11132 162 SSLLSINSVSAAHSGEYTCVASNTAAQA-----RYSSKLQVKGNLNRLPPS--------YTLVFSQASYMSTSYYSF--E 226 (243)
Q Consensus 162 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~-----~~~~~l~v~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~--~ 226 (243)
...|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|...+ .||. +.+..+..+.+.|..... +
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT--PSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS--CCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC--CCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 3479999999999999999999987753 346667766321 1222 233457888999987654 4
Q ss_pred ccceEEeCCee
Q psy11132 227 QDSWMIDNENY 237 (243)
Q Consensus 227 ~~~W~~~~~~~ 237 (243)
.+.|++++..+
T Consensus 167 ~v~W~k~~~~~ 177 (250)
T 2fbo_J 167 NVTWYTGPTFF 177 (250)
T ss_dssp EEEEEEEEECS
T ss_pred eeEEEeCCCcc
Confidence 89999997643
No 451
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=3.2e-13 Score=82.88 Aligned_cols=73 Identities=25% Similarity=0.564 Sum_probs=58.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCccee--ee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR--YS 192 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~--~~ 192 (243)
..+..|+.+.|.|.+ .+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|..+... ..
T Consensus 20 ~~v~~G~~v~l~C~~-~g~p~~~v~W~k~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~ 88 (96)
T 2ens_A 20 GAVAPGGTVTLTCEV-PAQPSPQIHWMKDGVPLPLPP----------SPVLILPEIGPQDQGTYSCVATHSSHGPQESRA 88 (96)
T ss_dssp SEECTTCEEEEECCC-SSCSSCCCCCEESSSBCSSCC----------CSEEEEESCCTTTCEEEECEECCSSCCCEECCC
T ss_pred CEEcCCCeEEEEEEE-ccCCCCEEEEEECCEECcCCC----------CCEEEECCCCcccCEEEEEEEEeCCCCcEEEEE
Confidence 457889999999999 688989999999998876442 35799999999999999999999765443 34
Q ss_pred EEEEEE
Q psy11132 193 SKLQVK 198 (243)
Q Consensus 193 ~~l~v~ 198 (243)
+.|.|.
T Consensus 89 ~~v~V~ 94 (96)
T 2ens_A 89 VSISII 94 (96)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 555554
No 452
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.40 E-value=1.7e-13 Score=94.53 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=81.0
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEe--cCC------------CCCeeEEee--ccceeEEEEeecCCCCCeeEE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKP--LSP------------RFPVNVSDL--DSFSSLLSINSVSAAHSGEYT 179 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~--~~~------------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~ 179 (243)
.+.+|+++.|.|.+ .+.|.+.+.|++++.. +.. ..+...... ......|.|.+++.+|+|.|+
T Consensus 6 ~~~~G~~v~L~C~~-~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 6 LGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEETTSCEEECCBC-SSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEeCCCCEEEEEEE-cCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 45689999999998 5888899999998752 110 000111100 122456999999999999999
Q ss_pred EEEEccCcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCcccc--cccceEEeCCeeE
Q psy11132 180 CVASNTAAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSYYSF--EQDSWMIDNENYV 238 (243)
Q Consensus 180 C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~W~~~~~~~~ 238 (243)
|.+.|..+ .+.+.|.... .++...+..++.+.+.|..... +.+.|+++|..+.
T Consensus 85 C~~~~~~~----~~~l~V~~~~--~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~ 139 (184)
T 2ny1_B 85 CEVEDQKE----EVQLLVFGLT--ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI 139 (184)
T ss_dssp EEETTEEE----EEEEEEEEEE--ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE
T ss_pred EEEEcCCC----cEEEEEEEec--CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc
Confidence 99998754 3445554322 3555677888899999987544 4899999987653
No 453
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=1.8e-12 Score=80.65 Aligned_cols=77 Identities=23% Similarity=0.410 Sum_probs=59.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC-CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 193 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 193 (243)
..+.+|+.+.|.|.+ +.|.+.+.|+++|..+... ..+.... ++....|.|.++..+|+|.|+|.|.+ ...++
T Consensus 26 ~~v~~G~~v~L~C~~--~~p~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~~ 98 (104)
T 1pd6_A 26 YQVSKGHKIRLTVEL--ADHDAEVKWLKNGQEIQMSGSKYIFES-IGAKRTLTISQCSLADDAAYQCVVGG----EKCST 98 (104)
T ss_dssp EEEETTSCEEEEEEC--SSSSSCCEEEESSSEECCCSSSSEEEE-ETTEEEEEECSCSSSSCEEEEEEETT----EEECC
T ss_pred EEEecCCCEEEEEEE--cCCCCEEEEEECCEECCCCCCeEEEEe-cCCEEEEEECCCCcccCEEEEEEECC----CcEEE
Confidence 457789999999998 4788889999999988766 4444332 33356899999999999999999943 44555
Q ss_pred EEEEE
Q psy11132 194 KLQVK 198 (243)
Q Consensus 194 ~l~v~ 198 (243)
.|.|.
T Consensus 99 ~l~V~ 103 (104)
T 1pd6_A 99 ELFVK 103 (104)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
No 454
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.40 E-value=1.8e-13 Score=97.89 Aligned_cols=120 Identities=16% Similarity=0.190 Sum_probs=78.5
Q ss_pred CCCCCCcEEEEEEeecCCCC--CEEEEEeCCEec-CCCCCeeEEeecc---ceeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 116 GLPEGARTRVICGVTHGDPP--LTIRWLKDGKPL-SPRFPVNVSDLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~--~~~~W~~~~~~~-~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
.+..|+.+.|.|.+.+..|. ..+.|+++|..+ ...........++ ..+.|.|..+..+|+|.|+|.|.|..+..
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 103 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPL 103 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCC
Confidence 34689999999999644563 499999998877 3222111111111 13569999999999999999999987653
Q ss_pred eeeEEEEEEee-cCCCCCeeeeec-------cceeeeccCcccc----cccceEEeCCee
Q psy11132 190 RYSSKLQVKGN-LNRLPPSYTLVF-------SQASYMSTSYYSF----EQDSWMIDNENY 237 (243)
Q Consensus 190 ~~~~~l~v~~~-~~~~~p~~~~~~-------~~~~~~~~~~~~~----~~~~W~~~~~~~ 237 (243)
.+.+.|... ....+|.+.+.. +..+.+.|....+ ..+.|++||+.+
T Consensus 104 --~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l 161 (231)
T 2w59_A 104 --PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAV 161 (231)
T ss_dssp --CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred --ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEEC
Confidence 233333211 112456554331 3467899988775 279999998765
No 455
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.40 E-value=2.4e-12 Score=82.83 Aligned_cols=82 Identities=13% Similarity=0.189 Sum_probs=63.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC--------CCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS--------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA 186 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 186 (243)
..+.+|+++.|.|.+ .+.|.+.+.|++.+..+. ...+............|.|.+++.+|+|.|.|.|.|.
T Consensus 11 ~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~- 88 (124)
T 3rbg_A 11 ITVEEGQTLTLKCVT-SLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD- 88 (124)
T ss_dssp EEEETTSCEEEEEEC-CCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-
T ss_pred EEEcCCCCEEEEeEE-eccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-
Confidence 456789999999999 588899999997654321 2222223222334578999999999999999999999
Q ss_pred cceeeeEEEEEE
Q psy11132 187 AQARYSSKLQVK 198 (243)
Q Consensus 187 g~~~~~~~l~v~ 198 (243)
|.....+.|.|.
T Consensus 89 g~~~~~~~l~V~ 100 (124)
T 3rbg_A 89 SVSTKEVKVIVL 100 (124)
T ss_dssp SEEEEEEEEEEE
T ss_pred CCCcEEEEEEEE
Confidence 888888999988
No 456
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.39 E-value=4.3e-12 Score=84.00 Aligned_cols=82 Identities=21% Similarity=0.366 Sum_probs=62.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEe---------CCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEcc
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLK---------DGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNT 185 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~---------~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 185 (243)
..+.+|+++.|.|.+ .+.+.+.+.|++ ++..+. ..+............|.|.+++.+|+|.|.|.+.|.
T Consensus 48 ~~v~~G~~v~L~C~~-~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 125 (145)
T 1z9m_A 48 ETVVAGGTVVLKCQV-KDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM 125 (145)
T ss_dssp EEEETTSCEEEEEEC-SCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred EEEEcCCCEEEEEEE-cCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC
Confidence 567899999999999 577888999994 333332 223333333334578999999999999999999999
Q ss_pred CcceeeeEEEEEEe
Q psy11132 186 AAQARYSSKLQVKG 199 (243)
Q Consensus 186 ~g~~~~~~~l~v~~ 199 (243)
|.....+.|.|..
T Consensus 126 -~~~~~~~~L~V~~ 138 (145)
T 1z9m_A 126 -PVRTAKSLVTVLG 138 (145)
T ss_dssp -SCEEEEEEEEEEC
T ss_pred -CCceEEEEEEEEe
Confidence 8888888888883
No 457
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.39 E-value=3.1e-12 Score=78.23 Aligned_cols=77 Identities=17% Similarity=0.336 Sum_probs=61.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+.+.|.|.+ +.|.+.+.|++++..+.....+.... .+....|.|.+++.+|+|.|+|.| |....++.
T Consensus 18 ~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~ 90 (95)
T 2k1m_A 18 VEVAAGSPAVFEAET--ERAGVKVRWQRGGSDISASNKYGLAT-EGTRHTLTVREVGPADQGSYAVIA----GSSKVKFD 90 (95)
T ss_dssp EEEETTSCEEEEEEC--SSSSCCCEEECSSSEECSSTTCEEEE-ETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEE
T ss_pred EEEeCCCcEEEEEEe--CCCCCeEEEEECCEECCCCCcEEEEE-cCCEEEEEEcCCCcccCEEEEEEE----CCceEEEE
Confidence 456789999999998 57888999999999887665554433 333568999999999999999999 55666677
Q ss_pred EEEE
Q psy11132 195 LQVK 198 (243)
Q Consensus 195 l~v~ 198 (243)
|.|.
T Consensus 91 l~V~ 94 (95)
T 2k1m_A 91 LKVI 94 (95)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 458
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.39 E-value=4.1e-12 Score=92.07 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=80.4
Q ss_pred CCCCCCCcEEEEEEeecCCC-----CCEEEEEeCCE--ec-----------C-CCCCeeEEeeccceeEEEEeecCCCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP-----PLTIRWLKDGK--PL-----------S-PRFPVNVSDLDSFSSLLSINSVSAAHS 175 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p-----~~~~~W~~~~~--~~-----------~-~~~~~~~~~~~~~~~~l~i~~~~~~d~ 175 (243)
..+.+|+++.|.|.+ .+.+ .+.+.|++++. .+ . ...++.... ......|.|.+++.+|+
T Consensus 44 ~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~ 121 (252)
T 3bkj_L 44 LPVNLGEQASISCRS-SQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-SGTDFTLRISRVEAEDL 121 (252)
T ss_dssp EEECTTSCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGC
T ss_pred EEEeCCCcEEEEEEc-CCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-cCCEEEEEECCCCcccC
Confidence 456789999999999 5776 58999998542 11 0 011222221 23356899999999999
Q ss_pred eeEEEEEEccCcce-eeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 176 GEYTCVASNTAAQA-RYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 176 g~y~C~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
|.|.|.+.|..+.. .....+.|... ..+|.+.+. .++.+.+.|....+ | .+.|+++|..+
T Consensus 122 G~Y~C~~~~~~~~~~~~~~~l~V~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 122 GVYYCFQASLVPLTFGAGTKLELKRA--DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp EEEEEEECSBSSCEECCCEEEEECCC--CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred EEEEEEEEcCCccEECCCEEEEEeCC--CcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 99999999976532 23345666521 235666543 25688899988663 2 59999998764
No 459
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.38 E-value=1.8e-12 Score=94.11 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=66.5
Q ss_pred eEEEec---CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 3 VIFSTV---PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 3 ~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
.|.|.. +|.+...+. ..+.+|++++|.|.+. +. .+.+.|+|+|..+.................|.|.+++ |+
T Consensus 98 ~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~-~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~ 172 (257)
T 1b6u_A 98 DIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSR-SS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HG 172 (257)
T ss_dssp EEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECS-SC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SC
T ss_pred EEecccCCCCcceEccCC-CccCCCCEEEEEEeCC-CC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cC
Confidence 455543 455555443 4688999999999984 44 3589999999766532211111111125789999998 99
Q ss_pred eeEEEEEEeCCC-----cceeEEEEEEEcCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCE
Q psy11132 80 GNYSCTVRNMVA-----EDTQVQRLIVNVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK 145 (243)
Q Consensus 80 G~Y~C~~~~~~~-----~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~ 145 (243)
|.|+|.+.+... ..+..+.|.|..+|..............|..+.|.|.+ |.+...+.|...+.
T Consensus 173 G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~--~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 173 GTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA--EQKLISEEDLNLDL 241 (257)
T ss_dssp EEEEEEEECSSCTTBBCCCCCCEEECCBCCC----------------------------------------
T ss_pred EEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE--cchHHHHHHhhhhh
Confidence 999999996532 34567888888877654222211234579999999976 67788889986544
No 460
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.38 E-value=5.8e-13 Score=94.56 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=78.3
Q ss_pred CCCCCCCcEEEEEEeecCCCCC----EEEEEeCCEecCC-------------CCCeeEEee----ccceeEEEEeecCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPL----TIRWLKDGKPLSP-------------RFPVNVSDL----DSFSSLLSINSVSAA 173 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~----~~~W~~~~~~~~~-------------~~~~~~~~~----~~~~~~l~i~~~~~~ 173 (243)
..+..|+++.|.|.+..+.+.+ .+.|++++..... ..+...... ......|.|.+++.+
T Consensus 9 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 88 (221)
T 3eow_R 9 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE 88 (221)
T ss_dssp CCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC
T ss_pred EEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH
Confidence 5677899999999984334433 4999998643211 111111110 113568999999999
Q ss_pred CCeeEEEEEEccC-cceeeeEEEEEEeecCCCCCeeeeec------ccee-eeccCcc-c--ccccceEEeCCe
Q psy11132 174 HSGEYTCVASNTA-AQARYSSKLQVKGNLNRLPPSYTLVF------SQAS-YMSTSYY-S--FEQDSWMIDNEN 236 (243)
Q Consensus 174 d~g~y~C~~~n~~-g~~~~~~~l~v~~~~~~~~p~~~~~~------~~~~-~~~~~~~-~--~~~~~W~~~~~~ 236 (243)
|+|.|.|.+.+.. +.....+.|.|. .+|.+.+.+ ++.+ .+.|... . -+.++|++++..
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~L~V~-----~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~ 157 (221)
T 3eow_R 89 DEGSYTCLFVTFPQGSRSVDIWLRVL-----AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGG 157 (221)
T ss_dssp CCSCBEEEEEESSSCSCEEECCCCCC-----CCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSC
T ss_pred HCeEEEEEEEeCCCCceEEEEEEEEE-----ECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCC
Confidence 9999999999976 667777777777 566655432 3344 4888754 3 358999987543
No 461
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.38 E-value=4.1e-13 Score=93.40 Aligned_cols=119 Identities=16% Similarity=0.133 Sum_probs=80.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecC---CCCC----eeE--------EeeccceeEEEEeecCCCCCeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS---PRFP----VNV--------SDLDSFSSLLSINSVSAAHSGEYT 179 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~---~~~~----~~~--------~~~~~~~~~l~i~~~~~~d~g~y~ 179 (243)
..+.+|+++.|.|.+..+.+.+.+.|++++..+. .... ... .... ....|.|.+++.+|+|.|.
T Consensus 8 v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~~sL~I~~v~~~D~G~Y~ 86 (193)
T 2if7_A 8 VNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QSYSLQLSNLKMEDTGSYR 86 (193)
T ss_dssp EEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TTCCEEECSCCGGGCEEEE
T ss_pred EEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CCeEEEECCCCcccCceEE
Confidence 3456899999999984335567999999876442 1100 000 0001 2467999999999999999
Q ss_pred EEEEccCcceeeeEEEEEEeecCCCCCeeeee-----ccc-eeeeccCccc---ccccceEEeCCe
Q psy11132 180 CVASNTAAQARYSSKLQVKGNLNRLPPSYTLV-----FSQ-ASYMSTSYYS---FEQDSWMIDNEN 236 (243)
Q Consensus 180 C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~-----~~~-~~~~~~~~~~---~~~~~W~~~~~~ 236 (243)
|.+.+..+.....+.|.|...+ ..|.+... .+. .+.+.|.... .+.+.|+++|..
T Consensus 87 C~~~~~~~~~~~~~~L~V~~~~--~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~ 150 (193)
T 2if7_A 87 AQISTKTSAKLSSYTLRILRQL--RNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT 150 (193)
T ss_dssp EEEECSSCEEEEEEEEEEECCC--EEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEE
T ss_pred EEEEecCCCeEEEEEEEEEccC--CCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEE
Confidence 9999998877677788876321 12333332 233 6889998765 358999998754
No 462
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.38 E-value=5.8e-13 Score=93.93 Aligned_cols=120 Identities=14% Similarity=0.248 Sum_probs=79.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--EecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+.+.|.|.+ .+.|.+.+.|++++ ..+. ...+..... ......|.|.+++.+|+|.|.|
T Consensus 9 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 86 (212)
T 1nfd_E 9 ASVTVGETVKITCSG-DQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-SGTTATLTISGAQPEDEAAYYC 86 (212)
T ss_dssp EEEETTSCCCEEEEE-TTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEETTCCGGGCSEEEE
T ss_pred EEEeCCCcEEEEEec-CCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-eCCEEEEEECcCCcccCEEEEE
Confidence 346789999999997 67777789999843 2220 012222222 3345689999999999999999
Q ss_pred EEEccCc-ce--eeeEEEEEEeecCCCCCeeeee-------ccceeeeccCcccc----cccceEEeCCee
Q psy11132 181 VASNTAA-QA--RYSSKLQVKGNLNRLPPSYTLV-------FSQASYMSTSYYSF----EQDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g-~~--~~~~~l~v~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~----~~~~W~~~~~~~ 237 (243)
.|.|..+ .. .....+.|.... ..+|.+.+. .++.+.+.|..... +.+.|+++|..+
T Consensus 87 ~~~n~~~~~~~~~~~~~l~V~~~~-~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 156 (212)
T 1nfd_E 87 LSSYGDNNDLVFGSGTQLTVLRGP-KSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATI 156 (212)
T ss_dssp EEEETTTTEEEECCCEEEEEECCC-CBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEE
T ss_pred EEEcccCcccccCCceEEEEccCC-CCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEc
Confidence 9997322 21 233556664322 145555442 36688899987755 379999998654
No 463
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.38 E-value=7.5e-12 Score=90.52 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=78.6
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEe-------------c-CCCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKP-------------L-SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~-------------~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+ .+.|.+.+.|+++... . ....++.. ........|.|.+++.+|+|.|.|
T Consensus 14 ~~v~~G~~v~L~C~~-~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~-~~~~~~~~L~I~~v~~~D~G~Y~C 91 (250)
T 3esu_F 14 LSASLGDRVTISCRA-SQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSG-SGSGTDYSLTISNLEQEDIGTYFC 91 (250)
T ss_dssp EEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEE-EEETTEEEEEESSCCGGGCEEEEE
T ss_pred EEeeCCCcEEEEEEe-cccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEE-eCCCCEEEEEEccCChhhCEEEEE
Confidence 346789999999999 6888889999985310 0 01112211 222335689999999999999999
Q ss_pred EEEccCcce-eeeEEEEEEee---------------------cCCCCCeeeeeccceeeeccCccc----ccccceEEe
Q psy11132 181 VASNTAAQA-RYSSKLQVKGN---------------------LNRLPPSYTLVFSQASYMSTSYYS----FEQDSWMID 233 (243)
Q Consensus 181 ~~~n~~g~~-~~~~~l~v~~~---------------------~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~W~~~ 233 (243)
.|.|..+.. .....|.|... ....|+...+..++.+.+.|.... .+.+.|+++
T Consensus 92 ~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 92 QQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp EECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred EEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 999976543 23345555431 011234456677888999998654 458999998
No 464
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=6.1e-12 Score=78.12 Aligned_cols=79 Identities=25% Similarity=0.354 Sum_probs=63.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 194 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 194 (243)
..+.+|+++.|.|.+ +.|.+.+.|++++..+.....+... .+.....|.|.++..+|+|.|+|. .|.....+.
T Consensus 18 ~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~ 90 (103)
T 2dku_A 18 LQVEEKGTAVFTCKT--EHPAATVTWRKGLLELRASGKHQPS-QEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQ 90 (103)
T ss_dssp EEEETTSEEEEEEEC--SSCCSCCEEEESSCBCCSSSSEEEE-EETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEE
T ss_pred EEEeCCCcEEEEEEe--CCCCCeEEEEeCCEECCCCCeEEEE-eCCCEEEEEECCCCcccCEEEEEE----eCCceEEEE
Confidence 557789999999995 6788899999999998876655544 233456899999999999999998 566777788
Q ss_pred EEEEee
Q psy11132 195 LQVKGN 200 (243)
Q Consensus 195 l~v~~~ 200 (243)
|.|.+.
T Consensus 91 l~V~~~ 96 (103)
T 2dku_A 91 LLVQGR 96 (103)
T ss_dssp EEEECS
T ss_pred EEEeCc
Confidence 888743
No 465
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.36 E-value=6.8e-12 Score=91.74 Aligned_cols=121 Identities=17% Similarity=0.280 Sum_probs=80.5
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeC--CEec------------CCC----CCeeEEeeccceeEEEEeecCCCCCe
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKD--GKPL------------SPR----FPVNVSDLDSFSSLLSINSVSAAHSG 176 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--~~~~------------~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g 176 (243)
..+.+|+++.|.|.+. .+.+.+.|++. +... ... .+............|.|.+++.+|+|
T Consensus 36 v~v~~G~~v~L~C~~~--~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 113 (268)
T 3pl6_D 36 KVTEKGKYVELRCDPI--SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSA 113 (268)
T ss_dssp EEEETTCCEEEEEBCB--TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCE
T ss_pred EEecCCCCEEEEEEeC--CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCE
Confidence 4567899999999983 57789999982 2111 000 22222222233578999999999999
Q ss_pred eEEEEEEcc--CcceeeeEEEEEEeec-CCCCCeeeee--------ccceeeeccCcccc---c-ccceEEeCCee
Q psy11132 177 EYTCVASNT--AAQARYSSKLQVKGNL-NRLPPSYTLV--------FSQASYMSTSYYSF---E-QDSWMIDNENY 237 (243)
Q Consensus 177 ~y~C~~~n~--~g~~~~~~~l~v~~~~-~~~~p~~~~~--------~~~~~~~~~~~~~~---~-~~~W~~~~~~~ 237 (243)
.|.|.+.|. .+.......+.|.... ...+|.+.+. .++.+.+.|....+ + .+.|++||+.+
T Consensus 114 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l 189 (268)
T 3pl6_D 114 VYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 189 (268)
T ss_dssp EEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEE
T ss_pred EEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEEC
Confidence 999999984 3333445567776422 2235654432 25788899987663 2 79999999765
No 466
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.36 E-value=2.8e-12 Score=90.90 Aligned_cols=120 Identities=18% Similarity=0.290 Sum_probs=79.7
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeC--CEecC------C-----------CCCeeEEee-ccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKD--GKPLS------P-----------RFPVNVSDL-DSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~--~~~~~------~-----------~~~~~~~~~-~~~~~~l~i~~~~~ 172 (243)
..+.+|+++.|.|.+. +.+ .+.+.|+++ +..+. . ..+...... ......|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (219)
T 1c1e_H 10 ELKKPGETVKISCKAS-GYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKN 88 (219)
T ss_dssp EEECTTCCEEEEEEEE-SSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCG
T ss_pred eEecCCCcEEEEEEEe-CcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 3467899999999994 654 689999986 32211 0 112222211 12356899999999
Q ss_pred CCCeeEEEEEEccCcc----eeeeEEEEEEeecCCCCCeeee-------eccceeeeccCccc-c--c-ccceEEeCCe
Q psy11132 173 AHSGEYTCVASNTAAQ----ARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYS-F--E-QDSWMIDNEN 236 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g~----~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~-~--~-~~~W~~~~~~ 236 (243)
+|+|.|.|.+.|..+. ....+.|.|..... .+|.+.. ..++.+.+.|.... . + .+.|+++|..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 89 EDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKT-TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp GGCEEEEEEEEETTTTEEEEECCCEEEEECCCCC-BCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ccCEEEEEEEeccCcccceeecCceEEEEecCCC-CCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 9999999999998632 22346677664221 2344432 34678889998765 3 4 8999999865
No 467
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.36 E-value=5.9e-13 Score=84.80 Aligned_cols=83 Identities=24% Similarity=0.331 Sum_probs=58.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCC----eeEEeeccceeEEE--EeecCCCCCeeEEEEEEccCcc
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP----VNVSDLDSFSSLLS--INSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~----~~~~~~~~~~~~l~--i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
..+..|+.+.|.|.+ .|.|.+.+.|++++..+..... .......+....+. +.+++.+|+|.|.|.|.|..|.
T Consensus 19 ~~v~~G~~v~L~C~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~ 97 (117)
T 2v9t_A 19 LIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE 97 (117)
T ss_dssp EEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEE
T ss_pred EEEcCCCcEEEEEEC-CccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccc
Confidence 456789999999999 5899999999999998875421 11111111111222 2255789999999999999998
Q ss_pred ee-eeEEEEEE
Q psy11132 189 AR-YSSKLQVK 198 (243)
Q Consensus 189 ~~-~~~~l~v~ 198 (243)
.. ..+.+.+.
T Consensus 98 ~~s~~~~l~~~ 108 (117)
T 2v9t_A 98 AVSHDASLEVA 108 (117)
T ss_dssp EECCCEEEEEC
T ss_pred eEeeeEEEEhh
Confidence 75 44666665
No 468
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.36 E-value=5.1e-13 Score=96.02 Aligned_cols=119 Identities=14% Similarity=0.182 Sum_probs=77.9
Q ss_pred CCCCCcEEEEEEeecCC---CCC-EEEEEeCCEecCCCCCee-EEeec---cceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 117 LPEGARTRVICGVTHGD---PPL-TIRWLKDGKPLSPRFPVN-VSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 117 ~~~g~~~~l~C~~~~~~---p~~-~~~W~~~~~~~~~~~~~~-~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
+..|+++.|.|.+. +. |.+ .+.|++++..+....... ..... ...+.|.|..++.+|+|.|.|.|.|..+.
T Consensus 29 v~~G~~v~L~C~~~-g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 107 (239)
T 1i1c_A 29 LGGGLTPKVTCVVV-DISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFP 107 (239)
T ss_dssp TTSSSCCEEEEEEE-EECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSS
T ss_pred cccCCcEEEEEEEe-cCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCC
Confidence 57899999999996 54 655 999999886654321100 00000 12357999999999999999999998875
Q ss_pred eeeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 189 ARYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 189 ~~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
......+... .....+|.+.+.+ ++.+.+.|....+ | .+.|++||+.+
T Consensus 108 ~~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l 166 (239)
T 1i1c_A 108 APIEKSISKP-EGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQ 166 (239)
T ss_dssp SCEEEEECCC-SSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred CCcEEEEecC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEEC
Confidence 4322222110 0122566655432 3568899988764 2 68999998754
No 469
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.36 E-value=4.3e-12 Score=89.08 Aligned_cols=97 Identities=24% Similarity=0.418 Sum_probs=71.2
Q ss_pred eEEEecC---CCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCC
Q psy11132 3 VIFSTVP---PKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHS 79 (243)
Q Consensus 3 ~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 79 (243)
.|.|..+ |.+...... +.+|+.+.|.|.+. +.| +.+.|++++..+....++.... ....|.|.+++.+|+
T Consensus 103 ~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~-~~p-p~i~W~~~g~~l~~~~~~~~~~---~~~~L~i~~v~~~d~ 175 (208)
T 3r4d_A 103 RFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSN-DIG-ANIQWLFNSQSLQLTERMTLSQ---NNSILRIDPIKREDA 175 (208)
T ss_dssp EEEEECCCCCCEEEESCSS--CCTTCCEEEEEECS-CTT-CEEEEEETTEECCCCSSEEEET---TTTEEEESSCCGGGC
T ss_pred EEEeccCCCCCEEecCCce--EeeCCCEEEEEECC-CCC-CceEEEECCEeCCCCCCeEEcC---CCCEEEEeccCHHhC
Confidence 4566655 444443333 88999999999985 555 6999999999988766654332 247899999999999
Q ss_pred eeEEEEEEeCCCc-ceeEEEEEEEcCCC
Q psy11132 80 GNYSCTVRNMVAE-DTQVQRLIVNVPPK 106 (243)
Q Consensus 80 G~Y~C~~~~~~~~-~~~~~~l~v~~~p~ 106 (243)
|.|+|.+.|..|. .+..+.|.|..++.
T Consensus 176 G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 176 GEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp EEEEEEEECTTCCEECCCEEECCC----
T ss_pred eEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 9999999999887 45677777766554
No 470
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.36 E-value=3.3e-12 Score=93.31 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=80.3
Q ss_pred CCCCCCCcEEEEEEeec--CCCCCEEEEEeCCEecCCC------------------CCeeEE-eeccceeEEEEeecCCC
Q psy11132 115 DGLPEGARTRVICGVTH--GDPPLTIRWLKDGKPLSPR------------------FPVNVS-DLDSFSSLLSINSVSAA 173 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~--~~p~~~~~W~~~~~~~~~~------------------~~~~~~-~~~~~~~~l~i~~~~~~ 173 (243)
..+.+|+.+.|.|.+.. +.+.+.+.|++++...... .+.... ........|.|.+++.+
T Consensus 15 ~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 94 (268)
T 3mj6_A 15 LRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKA 94 (268)
T ss_dssp EEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGG
T ss_pred eEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHh
Confidence 45678999999999831 5677889999965433211 111110 00122367999999999
Q ss_pred CCeeEEEEEEccCcce--eeeEEEEEEeecCCCCCeeeeeccceeeeccCc---cc--ccccceEEeC
Q psy11132 174 HSGEYTCVASNTAAQA--RYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSY---YS--FEQDSWMIDN 234 (243)
Q Consensus 174 d~g~y~C~~~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~---~~--~~~~~W~~~~ 234 (243)
|+|.|+|.|.|..+.. ...+.|.|. +..|....+..+..+.+.|.. .. .+.+.|++++
T Consensus 95 D~G~Y~C~~~~~~~~~~~~~~~~l~V~---~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 95 DEGIYTCEIRLKNESMVMKKPVELWVL---PEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp GCEEEEEEEEETTCCCEEEEEEEEEEE---CCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred HCEEEEEEEEecCCcceEEEEEEEEEe---ccCCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 9999999999976554 344555554 225666788889999999988 33 3489999953
No 471
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.36 E-value=6.8e-12 Score=90.47 Aligned_cols=121 Identities=21% Similarity=0.287 Sum_probs=79.2
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEe--------------CCEecCCC----CCeeEEeeccceeEEEEeecCCCCCe
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLK--------------DGKPLSPR----FPVNVSDLDSFSSLLSINSVSAAHSG 176 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~--------------~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g 176 (243)
..+.+|+++.|.| . .+.+.+.+.|++ ++...... .+............|.|.+++.+|+|
T Consensus 12 v~v~~G~~v~L~C-~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 89 (245)
T 4ei6_B 12 QIIDMGQMVTLNC-D-PVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSA 89 (245)
T ss_dssp EEEETTCCEEEEE-E-CCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCE
T ss_pred EEecCCCCEEEEE-E-cCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCE
Confidence 4567899999999 4 477888999998 22111111 22333322234568999999999999
Q ss_pred eEEEEEEccC----cceeeeEEEEEEeec-CCCCCeeeee--------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 177 EYTCVASNTA----AQARYSSKLQVKGNL-NRLPPSYTLV--------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 177 ~y~C~~~n~~----g~~~~~~~l~v~~~~-~~~~p~~~~~--------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.|.|.+.+.. +.......+.|.... ...+|.+.+. .++.+.+.|....+ + .+.|++||..+
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l 167 (245)
T 4ei6_B 90 VYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (245)
T ss_dssp EEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEEC
Confidence 9999999632 233344567666321 1235554432 26788899987663 2 79999998654
No 472
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.35 E-value=3.6e-12 Score=93.79 Aligned_cols=122 Identities=18% Similarity=0.265 Sum_probs=82.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE--ec-------------C----CCCCeeEEeeccceeEEEEeecCCCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK--PL-------------S----PRFPVNVSDLDSFSSLLSINSVSAAHS 175 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~--~~-------------~----~~~~~~~~~~~~~~~~l~i~~~~~~d~ 175 (243)
..+.+|+++.|.|.+ .+.+.+.+.|++++. .. . ...+............|.|.+++.+|+
T Consensus 34 v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (279)
T 2wbj_D 34 VISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 112 (279)
T ss_dssp EEEETTSCEEEEEEE-SSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGC
T ss_pred EEecCCCeEEEEEEe-CCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCC
Confidence 446789999999999 577888999998541 10 0 011222222223456899999999999
Q ss_pred eeEEEEEEccCc------ceeeeEEEEEEeec-CCCCCeeeee--------ccceeeeccCcccc----cccceEEeCCe
Q psy11132 176 GEYTCVASNTAA------QARYSSKLQVKGNL-NRLPPSYTLV--------FSQASYMSTSYYSF----EQDSWMIDNEN 236 (243)
Q Consensus 176 g~y~C~~~n~~g------~~~~~~~l~v~~~~-~~~~p~~~~~--------~~~~~~~~~~~~~~----~~~~W~~~~~~ 236 (243)
|.|.|.+.|..+ .....+.|.|.... ...+|.+.+. .+..+.+.|....+ +.+.|++||+.
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 192 (279)
T 2wbj_D 113 SFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 192 (279)
T ss_dssp EEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred EEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEE
Confidence 999999999432 11233567776422 1246766543 25678899988765 37999999865
Q ss_pred e
Q psy11132 237 Y 237 (243)
Q Consensus 237 ~ 237 (243)
+
T Consensus 193 l 193 (279)
T 2wbj_D 193 V 193 (279)
T ss_dssp C
T ss_pred C
Confidence 4
No 473
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.35 E-value=6.6e-13 Score=95.03 Aligned_cols=119 Identities=16% Similarity=0.287 Sum_probs=63.9
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE--ec----------CC--CCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK--PL----------SP--RFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~--~~----------~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+ .+.|.+.+.|++++. .+ .. ..+.... .......|.|.+++.+|+|.|.|
T Consensus 33 ~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 110 (233)
T 3bqu_C 33 LSMSIGEKVTIRCIT-STDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSS-GYGTDFVFTIENMLSEDVADYYC 110 (233)
T ss_dssp C-------CCEEEEE-EEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCC-EEEEEEEEC-----CCCCSEEEE
T ss_pred EEEecCCCEEEEEec-CCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEee-ccCCEEEEEECCCCHHHCEEEEE
Confidence 557889999999998 466677899998532 11 00 1111111 12224579999999999999999
Q ss_pred EEEccCcce-eeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 181 VASNTAAQA-RYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 181 ~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.+.|..+.. .....+.|... ..+|.+.+.+ ++.+.+.|..... | .+.|+++|..+
T Consensus 111 ~~~~~~~~~~~~~~~l~V~~~--~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 177 (233)
T 3bqu_C 111 LQSDNLPYTFGGGTNLEIKRA--DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 177 (233)
T ss_dssp EECSSSSCCBCCCCBC---CC--CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC----
T ss_pred EEecCCceeecCCEEEEEeCC--CCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeC
Confidence 999876533 22344555421 1366665432 6788999987664 2 59999998754
No 474
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=7.2e-12 Score=77.64 Aligned_cols=76 Identities=32% Similarity=0.510 Sum_probs=61.3
Q ss_pred CCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcceeeeEEE
Q psy11132 116 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 195 (243)
Q Consensus 116 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~l 195 (243)
.+.+|+.+.|.|.+ . .|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.|.| ...++.|
T Consensus 22 ~v~~G~~v~L~C~~-~-~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~~l 94 (102)
T 2eo1_A 22 QAEAGASATLSCEV-A-QAQTEVTWYKDGKKLSSSSKVRVEA-VGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSFRL 94 (102)
T ss_dssp EEETTCCEEECCBC-S-CSSSCCEEEETTEECCCCSSEEEEE-ETTEEEEEETTCCTTTCSCEEEEETT----EECCEEE
T ss_pred EEeCCCcEEEEEEe-c-CCCCceEEEECCEECCCCCCEEEEE-cCCEEEEEECCCCcccCEEEEEEcCC----CcEEEEE
Confidence 46789999999998 4 7889999999999987766544432 33457899999999999999999954 4566788
Q ss_pred EEE
Q psy11132 196 QVK 198 (243)
Q Consensus 196 ~v~ 198 (243)
.|.
T Consensus 95 ~V~ 97 (102)
T 2eo1_A 95 QVA 97 (102)
T ss_dssp EEE
T ss_pred EEe
Confidence 887
No 475
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.04 E-value=7.1e-14 Score=95.90 Aligned_cols=130 Identities=16% Similarity=0.173 Sum_probs=80.7
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--ee---ec---------CCCceEEEE-eeeeceEEEEeecCCCC
Q psy11132 14 PTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--RY---LD---------NSAALSITH-VDQYNSMLVIDSVSARH 78 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~~---~~---------~~~~~~~~~-~~~~~~~l~i~~~~~~d 78 (243)
..+..+.+.+|++++|.|.+. +.+...+.|+|.. .. +. ...++.+.. .......|+|.+++.+|
T Consensus 5 Q~p~~v~v~~G~svtL~C~~s-~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~D 83 (185)
T 3c6l_A 5 QSPQSLTVWEGETAILNCSYE-DSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGD 83 (185)
Confidence 335567789999999999985 4344589999853 11 10 112232221 12235689999999999
Q ss_pred CeeEEEEEEeCCCcceeEEEEEEEcC-----CCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC
Q psy11132 79 SGNYSCTVRNMVAEDTQVQRLIVNVP-----PKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 150 (243)
Q Consensus 79 ~G~Y~C~~~~~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~ 150 (243)
+|.|.|.+.+....-.....|.|... |.+.... .....++|.|.+.+.+|.+++.|..+.......
T Consensus 84 sG~Y~C~~~~~~~~fg~gT~L~V~~~~~~~~P~V~~~~------~~~~~vtL~C~~~gf~P~p~v~~~~~~~~~~~~ 154 (185)
T 3c6l_A 84 SATYFCAASDNRIFFGDGTQLVVKPNIQNPEPAVYQLK------DPRSQDSTLCLFTDFDSQINVPKTMESGTFITD 154 (185)
Confidence 99999998752111111234555432 2121111 112378999999777899999998877655443
No 476
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.34 E-value=3.1e-12 Score=87.83 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=78.7
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeC-CEecC---CCCCe--------eEEeeccceeEEEEeecCCCCCeeEEEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKD-GKPLS---PRFPV--------NVSDLDSFSSLLSINSVSAAHSGEYTCVA 182 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~-~~~~~---~~~~~--------~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 182 (243)
..+.+|++++|.|.+....+.+.+.|+++ +..+. ..... .....+..+..|.|.+++.+|+|.|.|.+
T Consensus 9 v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v 88 (180)
T 2dru_A 9 VNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRM 88 (180)
T ss_dssp EEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEEE
T ss_pred EEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEE
Confidence 34678999999998732234689999994 32211 00000 00111123567999999999999999999
Q ss_pred EccCcceeeeEEEEEEeecCCCCCeeeeeccceeeeccCc-cc-ccccceEEeCCee
Q psy11132 183 SNTAAQARYSSKLQVKGNLNRLPPSYTLVFSQASYMSTSY-YS-FEQDSWMIDNENY 237 (243)
Q Consensus 183 ~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~~~-~~-~~~~~W~~~~~~~ 237 (243)
.+.. .....+.|.|...+ ..|.+.... ..+.+.|.. .. .+.+.|+++|..+
T Consensus 89 ~~~~-~~~~~~~L~V~~~~--~~P~i~~~~-~~v~L~C~~~~gp~p~i~W~~~~~~l 141 (180)
T 2dru_A 89 LHET-EDQWKITMEVYEMV--SKPMIYWEC-SNATLTCEVLEGTDVELKLYQGKEHL 141 (180)
T ss_dssp ESSS-EEEEEEEEEEECCC--CCCEEEEEG-GGTEEEEECSSCTTCEEEEEETTEEE
T ss_pred EcCC-eEEEEEEEEEECCC--CCCEEEecC-CCEEEEEEeCCCCCCEEEEEECCeEC
Confidence 8876 55666777777422 346665543 457888977 33 3489999998765
No 477
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.34 E-value=8.9e-12 Score=78.07 Aligned_cols=86 Identities=24% Similarity=0.418 Sum_probs=63.7
Q ss_pred CCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCeeEEeeccceeEEEEeecCCCCCeeEEEEEE
Q psy11132 104 PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 104 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
+|.+...+ ....+.+|+.+.|.|.+ .+. +.+.|++++..+.....+.... ......|.|.+++.+|+|.|+|.|.
T Consensus 8 pp~~~~~~-~~~~v~~G~~v~l~C~~-~~~--p~v~W~k~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~ 82 (108)
T 2dm7_A 8 PARFTQDL-KTKEASEGATATLQCEL-SKV--APVEWKKGPETLRDGGRYSLKQ-DGTRCELQIHDLSVADAGEYSCMCG 82 (108)
T ss_dssp CCCBCSCC-BCCEEETTSCEEEEEEB-SSS--CCCEEESSSSBCCSSSSCEEEE-ETTEEEEEESSCCTTTCSEEEEEET
T ss_pred CCeeeecC-CcEEEeCCCcEEEEEEe-CCC--CeeEEEECCEECCCCCCEEEEe-cCCEEEEEECCCCcccCEEEEEEEc
Confidence 34443333 23567889999999998 454 6899999999887665554443 3345679999999999999999995
Q ss_pred ccCcceeeeEEEEEE
Q psy11132 184 NTAAQARYSSKLQVK 198 (243)
Q Consensus 184 n~~g~~~~~~~l~v~ 198 (243)
| ....+.|.|.
T Consensus 83 n----~~~~~~l~V~ 93 (108)
T 2dm7_A 83 Q----ERTSATLTVR 93 (108)
T ss_dssp T----EEEEEECEEE
T ss_pred C----CEEEEEEEEe
Confidence 4 5666777777
No 478
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=99.34 E-value=1.7e-12 Score=89.84 Aligned_cols=163 Identities=17% Similarity=0.151 Sum_probs=95.3
Q ss_pred cCCCCCcccccCCeEEEEEEeeCCCCCceeEEEEC--Ceeec------------CCCceEEEE-eeeeceEEEEeecCCC
Q psy11132 13 SPTNPERTLNVGERASLICSITKGDIPLTIKWLKD--GRYLD------------NSAALSITH-VDQYNSMLVIDSVSAR 77 (243)
Q Consensus 13 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~--~~~~~------------~~~~~~~~~-~~~~~~~l~i~~~~~~ 77 (243)
...+..+.+.+|+.++|.|.+... ....+.|||. |+.+. ...|+.... .......|+|.+++.+
T Consensus 4 tQ~p~~v~v~~G~svtL~C~~s~~-~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~ 82 (200)
T 3rgv_A 4 TQMQGQVTLSENDFLFINCTYSTT-GYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEI 82 (200)
T ss_dssp ECCCSEEEEETTCCEEECCEEECS-SCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCST
T ss_pred EECCCEEEEeCCCCEEEEEEecCC-CCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCc
Confidence 344556778999999999999633 3458999984 22110 012333221 1223578999999999
Q ss_pred CCeeEEEEEEeCCCc-ceeEEEEEEEcC---CCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCCCe
Q psy11132 78 HSGNYSCTVRNMVAE-DTQVQRLIVNVP---PKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 153 (243)
Q Consensus 78 d~G~Y~C~~~~~~~~-~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~~~ 153 (243)
|+|.|.|.+...... -.....|.|... +.+...... .. ...++|.|.+.+.+|...+.|+++|..+......
T Consensus 83 DsG~Y~Ca~~~~~~~~fG~GT~L~V~~~~~~~~P~V~~~~--~~--~~~~tl~Cl~~gf~P~i~v~~~~~g~~~~~~~t~ 158 (200)
T 3rgv_A 83 DSAVYYCAANSGTYQRFGTGTKLQVVPNIQNPDPAVYQLR--DS--KSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCV 158 (200)
T ss_dssp TCEEEEEEEESSSCCCCCCCEEEEEECCCSSCCCEEEEEE--ES--SSSSCEEEEEESCCTTCCCCCCSSTTCEECCCEE
T ss_pred cCCCEEEEeccCcccccCcCEEEEEeCCCCCCCCeEEEcc--CC--CCCceEEEEcccccCCeEeEeccCCcEEeecceE
Confidence 999999999742111 112245666542 222221111 01 1236789999877787899999999887765443
Q ss_pred eEEeeccceeEEEEeecCCCCCeeEEEEEE
Q psy11132 154 NVSDLDSFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 154 ~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
.........+... +...+...|.|.+.
T Consensus 159 ~~~~~~~~~~~~~---~~w~~~~~~~c~~~ 185 (200)
T 3rgv_A 159 LDMRSMDFKSNSA---VAWSNKSDFACANA 185 (200)
T ss_dssp EEEGGGTEEEEEE---EEECSCSSCCTTTT
T ss_pred Eccccccccccce---EEecCCCceEeeee
Confidence 3332222122222 23455566777654
No 479
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.33 E-value=8.4e-12 Score=90.70 Aligned_cols=121 Identities=14% Similarity=0.205 Sum_probs=78.5
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--EecC----------------CCCCeeEEee-ccceeEEEEeecCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KPLS----------------PRFPVNVSDL-DSFSSLLSINSVSAA 173 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~~~----------------~~~~~~~~~~-~~~~~~l~i~~~~~~ 173 (243)
..+.+|+++.|.|.+ .+.| .+.+.|++++ ..+. ...++..... ......|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 10 GLVRPSETLSLTCTV-SGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp SEECTTSEEEEEEEE-ESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred ccccCCceEEEEEEE-ecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 456789999999999 4664 6899999852 1110 0112222221 233568999999999
Q ss_pred CCeeEEEEEEccCc-------ce--eeeEEEEEEeec-----------------CCCCCeeeeeccceeeeccCcccc--
Q psy11132 174 HSGEYTCVASNTAA-------QA--RYSSKLQVKGNL-----------------NRLPPSYTLVFSQASYMSTSYYSF-- 225 (243)
Q Consensus 174 d~g~y~C~~~n~~g-------~~--~~~~~l~v~~~~-----------------~~~~p~~~~~~~~~~~~~~~~~~~-- 225 (243)
|+|.|.|.|.|..| .. ...+.|.|...+ ...|..+.+..++.+.+.|.....
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 168 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNIN 168 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCB
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCC
Confidence 99999999999854 11 134566666321 001223445667888999976544
Q ss_pred cccceEE--eCCe
Q psy11132 226 EQDSWMI--DNEN 236 (243)
Q Consensus 226 ~~~~W~~--~~~~ 236 (243)
+.+.|++ +|+.
T Consensus 169 ~~v~W~k~~~g~~ 181 (257)
T 1f3r_B 169 NYLAWYQQKLGEA 181 (257)
T ss_dssp TCEEEEEECTTSC
T ss_pred CcEEEEEECCCCC
Confidence 4899999 4543
No 480
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.33 E-value=8.4e-12 Score=90.08 Aligned_cols=121 Identities=15% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCCE--ec-----------------CCCCCeeEEee-ccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDGK--PL-----------------SPRFPVNVSDL-DSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~~--~~-----------------~~~~~~~~~~~-~~~~~~l~i~~~~~ 172 (243)
..+.+|+++.|.|.+ .+.| .+.+.|+++.. .. ....+...... ......|.|.+++.
T Consensus 12 ~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAA-SGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp EEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEecCCcEEEEEEe-ccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 456789999999999 4766 67899998421 10 01122222222 23356899999999
Q ss_pred CCCeeEEEEEEccCcc--eeeeEEEEEEeecC----------CCC-------CeeeeeccceeeeccCcccc--cccceE
Q psy11132 173 AHSGEYTCVASNTAAQ--ARYSSKLQVKGNLN----------RLP-------PSYTLVFSQASYMSTSYYSF--EQDSWM 231 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g~--~~~~~~l~v~~~~~----------~~~-------p~~~~~~~~~~~~~~~~~~~--~~~~W~ 231 (243)
+|+|.|.|.|.|..+. ....+.|.|...+. ..+ ..+.+..++.+.+.|..... +.+.|+
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~ 170 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWY 170 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEE
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEE
Confidence 9999999999997332 22345666653210 012 23345667888889976554 489999
Q ss_pred E--eCCe
Q psy11132 232 I--DNEN 236 (243)
Q Consensus 232 ~--~~~~ 236 (243)
+ +|..
T Consensus 171 k~~~g~~ 177 (247)
T 2ghw_B 171 QQKPGQA 177 (247)
T ss_dssp EECTTSC
T ss_pred EECCCCC
Confidence 9 4543
No 481
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.33 E-value=5e-12 Score=89.78 Aligned_cols=120 Identities=16% Similarity=0.240 Sum_probs=78.9
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--EecC-------------------CCCCeeEEee-ccceeEEEEeec
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KPLS-------------------PRFPVNVSDL-DSFSSLLSINSV 170 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~~~-------------------~~~~~~~~~~-~~~~~~l~i~~~ 170 (243)
..+.+|+++.|.|.+. +.+ .+.+.|+++. .... ...+...... ......|.|.++
T Consensus 10 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 10 GLVQSGGSLRLSCATS-GFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred eeEcCCCEEEEEEEec-CccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 3467899999999994 654 6799999843 1100 0112222221 123568999999
Q ss_pred CCCCCeeEEEEEEccCc-----ceeeeEEEEEEeecCCCCCeeee-------eccceeeeccCcccc---c-ccceEEeC
Q psy11132 171 SAAHSGEYTCVASNTAA-----QARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYSF---E-QDSWMIDN 234 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g-----~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~---~-~~~W~~~~ 234 (243)
+.+|+|.|.|.+.|..+ .......|.|..... .+|.+.. ..++.+.+.|....+ + .+.|+++|
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 167 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKT-TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 167 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCC-BCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCC-CCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCC
Confidence 99999999999999765 222345666663221 3444433 246788899988654 3 89999998
Q ss_pred Ce
Q psy11132 235 EN 236 (243)
Q Consensus 235 ~~ 236 (243)
..
T Consensus 168 ~~ 169 (222)
T 1q9r_B 168 LS 169 (222)
T ss_dssp BC
T ss_pred eE
Confidence 64
No 482
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.32 E-value=6.3e-12 Score=88.29 Aligned_cols=159 Identities=17% Similarity=0.182 Sum_probs=93.8
Q ss_pred CCCCCcccccCCeEEEEEEeeCCCCCceeEEEECC--e---ee-c--C------CCceEEEE-eeeeceEEEEeecCCCC
Q psy11132 14 PTNPERTLNVGERASLICSITKGDIPLTIKWLKDG--R---YL-D--N------SAALSITH-VDQYNSMLVIDSVSARH 78 (243)
Q Consensus 14 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~--~---~~-~--~------~~~~~~~~-~~~~~~~l~i~~~~~~d 78 (243)
..+..+.+.+|+.++|.|.+. +.....+.|||.. . .+ . . ..++.... .......|+|.+++.+|
T Consensus 8 Q~p~~~~v~~G~svtL~C~~s-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~D 86 (210)
T 2eys_A 8 QSPQSLIILEGKNCTLQCNYT-VSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSD 86 (210)
T ss_dssp EECSEEEEETTCCEEEEEEEC-CSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGG
T ss_pred EeCCEEEEecCCCEEEEEEEC-CCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCccc
Confidence 335567789999999999985 4444589999843 1 11 1 1 12333221 11224689999999999
Q ss_pred CeeEEEEEEeCC---Ccc--eeEEEEEEEcCC---CccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCC
Q psy11132 79 SGNYSCTVRNMV---AED--TQVQRLIVNVPP---KIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 150 (243)
Q Consensus 79 ~G~Y~C~~~~~~---~~~--~~~~~l~v~~~p---~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~ 150 (243)
+|.|.|.+.+.. ... .....|.|...+ .+...... . ....++|.|.+.+..|.+.+.+ +. ..
T Consensus 87 sg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~--~--~~~~~tl~Cl~~gf~P~~~v~~---~~---~~ 156 (210)
T 2eys_A 87 SASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLR--D--SKSSDKSVCLFTDFDSQTNVSQ---SK---DS 156 (210)
T ss_dssp CEEEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEEC--C--CSSSSCEEEEEESCCTTCCCCC---CS---ST
T ss_pred CceEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecC--C--CCCCceEEEEcccccCCcEecc---cc---Cc
Confidence 999999998642 111 122456665421 11111111 1 1227789999965556544311 10 01
Q ss_pred CCeeEEeeccceeEEEEeecCCCCCeeEEEEEEccCcc
Q psy11132 151 FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ 188 (243)
Q Consensus 151 ~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 188 (243)
... . .....|.+..+...+.|.|.|.+.|..+.
T Consensus 157 -~~~-~---t~~~~l~~~~~~~~~~~~~~w~~~~~~~c 189 (210)
T 2eys_A 157 -DVY-I---TDKCVLDMRSMDFKSNSAVAWSNKSDFAC 189 (210)
T ss_dssp -TEE-E---CCCEEEEETTTTEEEEEEEEEECSTTCCH
T ss_pred -ceE-c---cCchhcchhcccccccchhhccCCCceEE
Confidence 010 0 11346777777778899999999887763
No 483
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.32 E-value=1.6e-11 Score=89.19 Aligned_cols=122 Identities=14% Similarity=0.269 Sum_probs=80.3
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--EecC-----------------CCCCeeEEee-ccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KPLS-----------------PRFPVNVSDL-DSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~~~~ 172 (243)
..+.+|++++|.|.+ .+.| .+.+.|++++ ..+. ...+...... ......|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (256)
T 1nqb_A 10 ELVKPGASVKLSCKA-SGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTS 88 (256)
T ss_dssp EEECTTCCEEEEEEE-CSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCcEEEEEEe-ccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCCh
Confidence 456789999999998 5665 6799999842 2110 0112222221 13356899999999
Q ss_pred CCCeeEEEEEEccCcc-----eeeeEEEEEEeecC--CCCCeeeeeccceeeeccCcccc--c-----ccceEE--eCCe
Q psy11132 173 AHSGEYTCVASNTAAQ-----ARYSSKLQVKGNLN--RLPPSYTLVFSQASYMSTSYYSF--E-----QDSWMI--DNEN 236 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g~-----~~~~~~l~v~~~~~--~~~p~~~~~~~~~~~~~~~~~~~--~-----~~~W~~--~~~~ 236 (243)
+|+|.|.|.+.|..|. ....+.|.|...+. ..|..+.+..++.+.+.|..... + .+.|+| +|..
T Consensus 89 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~ 168 (256)
T 1nqb_A 89 EDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQS 168 (256)
T ss_dssp GGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSC
T ss_pred hhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCC
Confidence 9999999999998663 12345666653221 12334567778889999976543 2 899999 5554
Q ss_pred e
Q psy11132 237 Y 237 (243)
Q Consensus 237 ~ 237 (243)
+
T Consensus 169 ~ 169 (256)
T 1nqb_A 169 P 169 (256)
T ss_dssp E
T ss_pred c
Confidence 3
No 484
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.32 E-value=1.1e-11 Score=99.72 Aligned_cols=91 Identities=21% Similarity=0.350 Sum_probs=79.6
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEe
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRN 88 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 88 (243)
+|.+...+....+.+|+++.|.|.+. |.|.+.++|++++.++..+.++.+...+ ...+|.|.++.+.|+|.|+|.|.|
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~-g~P~P~v~W~k~~~el~~s~~~~i~~~~-~~~~L~I~~~~~~D~G~Yt~~A~N 559 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVI-ASSPPVVTWHKDDRELKQSVKYMKRYNG-NDYGLTINRVKGDDKGEYTVRAKN 559 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEE-CSSCCEEEEEETTEECCSSSSEEEEEET-TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEE-ccCCCeEEEEECCEEcccCCcEEEEEcC-CEEEEEEcCCCcccCcEEEEEEEe
Confidence 45666666778899999999999995 8899999999999999988888776544 467899999999999999999999
Q ss_pred CCCcceeEEEEEE
Q psy11132 89 MVAEDTQVQRLIV 101 (243)
Q Consensus 89 ~~~~~~~~~~l~v 101 (243)
..|..+..+.|+|
T Consensus 560 ~~G~~~~~v~l~V 572 (573)
T 3uto_A 560 SYGTKEEIVFLNV 572 (573)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 9999998888887
No 485
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.32 E-value=1.1e-11 Score=88.98 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=78.8
Q ss_pred CCCCCCCcEEEEEEeecCCC----CCEEEEEeCC--EecC------------CCCCeeEEeeccceeEEEEeecCCCCCe
Q psy11132 115 DGLPEGARTRVICGVTHGDP----PLTIRWLKDG--KPLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSG 176 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p----~~~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 176 (243)
..+.+|+++.|.|.+ .+.| .+.+.|+++. ..+. ...++.... ......|.|.+++.+|+|
T Consensus 11 ~~v~~G~~v~L~C~~-~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G 88 (240)
T 1moe_A 11 LAVSLGQRATMSCRA-GESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SRTDFTLIIDPVEADDVA 88 (240)
T ss_dssp EEECTTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCE
T ss_pred EEecCCCCEEEEEeC-CCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe-cCCeEEEEEcCCChhhCE
Confidence 456789999999999 5777 7899999852 2110 011222221 233568999999999999
Q ss_pred eEEEEEEccCcc-eeeeEEEEEEeecCC--------CCCeeeeeccceeeeccCcccc----cccceEEe
Q psy11132 177 EYTCVASNTAAQ-ARYSSKLQVKGNLNR--------LPPSYTLVFSQASYMSTSYYSF----EQDSWMID 233 (243)
Q Consensus 177 ~y~C~~~n~~g~-~~~~~~l~v~~~~~~--------~~p~~~~~~~~~~~~~~~~~~~----~~~~W~~~ 233 (243)
.|.|.|.|..+. ......|.|...... .|+...+..++.+.+.|..... +.+.|+++
T Consensus 89 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 89 TYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp EEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 999999998664 334566777643210 1222345567888999977643 38999997
No 486
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=2.9e-11 Score=75.68 Aligned_cols=78 Identities=13% Similarity=0.192 Sum_probs=61.2
Q ss_pred CCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC----------CeeEEeeccceeEEEEeecCCCCCeeEEEEEE
Q psy11132 114 FDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----------PVNVSDLDSFSSLLSINSVSAAHSGEYTCVAS 183 (243)
Q Consensus 114 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~----------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 183 (243)
...+.+|+.+.|.|.+. + .+.+.|+++|..+.... ++.+. .++....|.|.+++.+|+|.|+|...
T Consensus 17 d~~v~eG~~a~f~C~vs-~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~-~~g~~~~L~I~~v~~~D~G~Y~~~~~ 92 (112)
T 2e6q_A 17 DVQVYDGEDAVFSLDLS-T--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIE-QKGLQHRLILHAVKHQDSGALVGFSC 92 (112)
T ss_dssp CEEEETTCEEEEEEEES-S--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEEC-CBTTEEEEEEESCCSTTCSEEEEEEE
T ss_pred CeEEcCCCcEEEEEEEC-C--CCeEEEEECCEECccCcccccccccccEEEEE-eCCcEEEEEECCCCHHHCccEEEEEE
Confidence 36678999999999994 5 67899999999998765 33333 34446789999999999999987554
Q ss_pred ccCcceeeeEEEEEE
Q psy11132 184 NTAAQARYSSKLQVK 198 (243)
Q Consensus 184 n~~g~~~~~~~l~v~ 198 (243)
+ ....++.|.|.
T Consensus 93 ~---~~~ssA~L~V~ 104 (112)
T 2e6q_A 93 P---GVQDSAALTIQ 104 (112)
T ss_dssp T---TEEEEEEEEEE
T ss_pred C---CeeEEEEEEEe
Confidence 4 24567889888
No 487
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.32 E-value=3.8e-12 Score=83.41 Aligned_cols=86 Identities=20% Similarity=0.319 Sum_probs=61.5
Q ss_pred cCCCccccccCCCCCCCCCcEEEEEEeecCCCCCEEEEEeCCEecCCCC----------CeeEEe--eccceeEEEEeec
Q psy11132 103 VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----------PVNVSD--LDSFSSLLSINSV 170 (243)
Q Consensus 103 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~~~~~~~----------~~~~~~--~~~~~~~l~i~~~ 170 (243)
.+|.+...+. ...+.+|+++.|.|.+ .|.|.+.+.|++++..+.... ...... .....+.|.|.++
T Consensus 20 ~pP~~~~~p~-~~~v~~G~~v~L~C~~-~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 20 HMAGFVQAPL-SQQRWVGGSVELHCEA-VGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp -CCEEEECCC-CEEEETTSCEEEEEEE-ECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCeEEcCCC-CEEEeCCCCEEEEEEE-eeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 4455544332 2566789999999999 689999999999877654321 111111 1123578999999
Q ss_pred CCCCCeeEEEEEEccCccee
Q psy11132 171 SAAHSGEYTCVASNTAAQAR 190 (243)
Q Consensus 171 ~~~d~g~y~C~~~n~~g~~~ 190 (243)
..+|+|.|.|.|.|..|...
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp CGGGCEEEEEEEECCTTSSS
T ss_pred CcccCEEEEEEEEecCCccc
Confidence 99999999999999998764
No 488
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.32 E-value=5e-12 Score=89.03 Aligned_cols=119 Identities=15% Similarity=0.228 Sum_probs=77.9
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--EecC----------------CCCCeeEEee-ccceeEEEEeecCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KPLS----------------PRFPVNVSDL-DSFSSLLSINSVSAA 173 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~~~----------------~~~~~~~~~~-~~~~~~l~i~~~~~~ 173 (243)
..+.+|+++.|.|.+. +.+ .+.+.|++++ .... ...+...... ......|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 88 (210)
T 3d9a_H 10 SLVKPSQTLSLTCSVT-GDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 88 (210)
T ss_dssp SEECTTSCEEEEEEEE-SSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEecCCCcEEEEEEEe-cccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcc
Confidence 4567899999999994 654 4899999852 2110 0122222221 223468999999999
Q ss_pred CCeeEEEEEEccCcceeeeEEEEEEeecCCCCCeeee-------eccceeeeccCcccc---c-ccceEEeCCe
Q psy11132 174 HSGEYTCVASNTAAQARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYSF---E-QDSWMIDNEN 236 (243)
Q Consensus 174 d~g~y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~---~-~~~W~~~~~~ 236 (243)
|+|.|.|.+.|.. .......+.|..... .+|.+.. ..++.+.+.|..... + .+.|+++|..
T Consensus 89 D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 160 (210)
T 3d9a_H 89 DTATYYCANWDGD-YWGQGTLVTVSAAKT-TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160 (210)
T ss_dssp GCEEEEEEETTSS-CBCCCEEEEECCCCC-BCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cCEEEEEEEecCc-ccccceEEEeccCCC-CCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcc
Confidence 9999999999864 222335666653221 3444432 346788899987655 4 8999999874
No 489
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.31 E-value=2.6e-11 Score=86.23 Aligned_cols=121 Identities=17% Similarity=0.232 Sum_probs=79.1
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--Ee---cC--------------CCCCeeEEee-ccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KP---LS--------------PRFPVNVSDL-DSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~---~~--------------~~~~~~~~~~-~~~~~~l~i~~~~~ 172 (243)
..+.+|+++.|.|.+. +.+ .+.+.|++.. .. +. ...+...... ......|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 10 GVVQPGKSLRLSCAAS-GFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp CEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEcCCCcEEEEEEec-CcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 4567899999999994 554 4789999843 11 10 0112222221 12356899999999
Q ss_pred CCCeeEEEEEEccCc------ceeeeEEEEEEeecCCCCCeeee-------eccceeeeccCcccc---c-ccceEE-eC
Q psy11132 173 AHSGEYTCVASNTAA------QARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYSF---E-QDSWMI-DN 234 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g------~~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~---~-~~~W~~-~~ 234 (243)
+|+|.|.|.+.+..| .....+.|.|..... .+|.+.. ..+..+.+.|....+ + .+.|++ ||
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g 167 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSA-SAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNN 167 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCC-BCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTS
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEccCCC-CCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCC
Confidence 999999999998753 112345677763222 3455443 245678899987765 3 799999 88
Q ss_pred Cee
Q psy11132 235 ENY 237 (243)
Q Consensus 235 ~~~ 237 (243)
+.+
T Consensus 168 ~~l 170 (223)
T 1dee_B 168 SDI 170 (223)
T ss_dssp CBC
T ss_pred Ccc
Confidence 654
No 490
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.31 E-value=1.6e-12 Score=91.46 Aligned_cols=118 Identities=16% Similarity=0.191 Sum_probs=70.7
Q ss_pred CCCCcEEEEEEeecCCC----CCEEEEEeCCEecCCCCCeeEEee-ccc---eeEEEEeecCCCCCeeEEEEEEccCcce
Q psy11132 118 PEGARTRVICGVTHGDP----PLTIRWLKDGKPLSPRFPVNVSDL-DSF---SSLLSINSVSAAHSGEYTCVASNTAAQA 189 (243)
Q Consensus 118 ~~g~~~~l~C~~~~~~p----~~~~~W~~~~~~~~~~~~~~~~~~-~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 189 (243)
..|+++.|.|.+. |.+ .+.+.|++++..+........... ++. .+.|.|.....+|+|.|+|.|.|..+..
T Consensus 16 ~~G~~v~L~C~~~-g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVV-DVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEE-EECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEe-cccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 6899999999995 543 359999999987654321100011 110 1223333333345999999999987764
Q ss_pred eeeEEEEEEeecCCCCCeeeeec-------cceeeeccCcccc-c---ccceEEeCCee
Q psy11132 190 RYSSKLQVKGNLNRLPPSYTLVF-------SQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 190 ~~~~~l~v~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
.....+.+. .....+|.+.+.+ +..+.+.|...++ | .+.|++||..+
T Consensus 95 ~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 152 (207)
T 1l6x_A 95 PIEKTISKA-KGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 152 (207)
T ss_dssp CEEEEECCC-CSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred ceEEEeccC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeec
Confidence 322223210 0112456654332 3457899988764 2 79999999765
No 491
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.31 E-value=1.9e-11 Score=87.83 Aligned_cols=121 Identities=18% Similarity=0.267 Sum_probs=78.4
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--------------EecC---CCCCeeEEeeccceeEEEEeecCCCCCee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--------------KPLS---PRFPVNVSDLDSFSSLLSINSVSAAHSGE 177 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--------------~~~~---~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 177 (243)
..+.+|+++.|.|.+ .+ +.+.+.|++.. .... ...+............|.|.+++.+|+|.
T Consensus 12 v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 89 (240)
T 3q5y_A 12 IIKEKGGRSVLTCIP-IS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAM 89 (240)
T ss_dssp EEEETTCCEEEEEEC-CT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEE
T ss_pred eeecCCCcEEEEEEe-CC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEE
Confidence 456789999999998 34 77899999821 1110 11222232223345789999999999999
Q ss_pred EEEEEEccC---cceeeeEEEEEEeec-CCCCCeeeee--------ccceeeeccCcccc-c---ccceEEeCCee
Q psy11132 178 YTCVASNTA---AQARYSSKLQVKGNL-NRLPPSYTLV--------FSQASYMSTSYYSF-E---QDSWMIDNENY 237 (243)
Q Consensus 178 y~C~~~n~~---g~~~~~~~l~v~~~~-~~~~p~~~~~--------~~~~~~~~~~~~~~-~---~~~W~~~~~~~ 237 (243)
|.|.+.+.. ........+.|...+ ...+|.+.+. .++.+.+.|....+ | .+.|+++|..+
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l 165 (240)
T 3q5y_A 90 YFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEV 165 (240)
T ss_dssp EEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEEC
Confidence 999998322 223344566666421 2245555432 25678899987763 3 68899998765
No 492
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.31 E-value=1.6e-11 Score=87.15 Aligned_cols=121 Identities=12% Similarity=0.189 Sum_probs=79.9
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--Ee---cC--------------CCCCeeEEee-ccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KP---LS--------------PRFPVNVSDL-DSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~---~~--------------~~~~~~~~~~-~~~~~~l~i~~~~~ 172 (243)
..+.+|+++.|.|.+. +.+ .+.+.|++.. .. +. ...+...... ......|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 10 GLVQPGGSLKLSCAAS-GFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp EEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred eEecCCCcEEEEEEec-CccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 4567899999999994 654 5789999843 11 10 0112222221 12356899999999
Q ss_pred CCCeeEEEEEEccCcc---eeeeEEEEEEeecCCCCCeeeee------ccceeeeccCcccc-----cccceEEeCCee
Q psy11132 173 AHSGEYTCVASNTAAQ---ARYSSKLQVKGNLNRLPPSYTLV------FSQASYMSTSYYSF-----EQDSWMIDNENY 237 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g~---~~~~~~l~v~~~~~~~~p~~~~~------~~~~~~~~~~~~~~-----~~~~W~~~~~~~ 237 (243)
+|+|.|.|.+.+..+. ....+.|.|..... .+|.+... .++.+.+.|....+ +.+.|+++|..+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAESA-RNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSCC-BCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCCC-CCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 9999999999987553 22345677763221 35555432 45677889987655 379999998764
No 493
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.30 E-value=5e-12 Score=91.97 Aligned_cols=119 Identities=13% Similarity=0.110 Sum_probs=73.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--EecC-----C--C-----------CCeeEEeeccceeEEEEeecCCCC
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPLS-----P--R-----------FPVNVSDLDSFSSLLSINSVSAAH 174 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~~-----~--~-----------~~~~~~~~~~~~~~l~i~~~~~~d 174 (243)
..+.+|++++|.|.+ .+.+.+.+.|++.. .... . . ..............|.|.+++.+|
T Consensus 12 ~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 90 (259)
T 3omz_A 12 VIRQTGSSAEITCDL-AEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEND 90 (259)
T ss_dssp EEEETTCCEEEECCC------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGG
T ss_pred eEecCCCcEEEEEEE-ccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCccc
Confidence 456789999999999 57788899999831 1100 0 0 000011112234579999999999
Q ss_pred CeeEEEEEEccCc---ceeeeEEEEEEeec-------------------CCCCCeeeeeccceeeeccCcc---cccccc
Q psy11132 175 SGEYTCVASNTAA---QARYSSKLQVKGNL-------------------NRLPPSYTLVFSQASYMSTSYY---SFEQDS 229 (243)
Q Consensus 175 ~g~y~C~~~n~~g---~~~~~~~l~v~~~~-------------------~~~~p~~~~~~~~~~~~~~~~~---~~~~~~ 229 (243)
+|.|.|.+.|..+ .......|.|.... ...|+.+.+..++.+.+.|... ..+.+.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~ 170 (259)
T 3omz_A 91 SGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIF 170 (259)
T ss_dssp CEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEE
T ss_pred CEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEE
Confidence 9999999999766 23344566666421 1123345667788999999654 335899
Q ss_pred eEEeC
Q psy11132 230 WMIDN 234 (243)
Q Consensus 230 W~~~~ 234 (243)
|+|.+
T Consensus 171 W~k~~ 175 (259)
T 3omz_A 171 WYKRL 175 (259)
T ss_dssp EEEEC
T ss_pred EeeeC
Confidence 99964
No 494
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.30 E-value=1.3e-11 Score=90.60 Aligned_cols=118 Identities=15% Similarity=0.141 Sum_probs=77.1
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE-----ecC---------CCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK-----PLS---------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~-----~~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|+++.|.|.+ .+.|.+.+.|++++. .+. ...++... .......|.|.+++.+|+|.|.|
T Consensus 22 ~~v~~G~~v~L~C~~-~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y~C 99 (276)
T 3auv_A 22 LSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS-GSGTDFTLTISSLQPEDFATYYC 99 (276)
T ss_dssp EECCTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCGGGCEEEEE
T ss_pred EEEcCCCCEEEEeEc-CCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEe-ccCCeEEEEEccCChhhCEEEEE
Confidence 457889999999999 588889999998542 110 01122222 12335689999999999999999
Q ss_pred EEEccCcc-eeeeEEEEEEeecC----------------CCCCeeeeeccceeeeccCccc----ccccceEEeC
Q psy11132 181 VASNTAAQ-ARYSSKLQVKGNLN----------------RLPPSYTLVFSQASYMSTSYYS----FEQDSWMIDN 234 (243)
Q Consensus 181 ~~~n~~g~-~~~~~~l~v~~~~~----------------~~~p~~~~~~~~~~~~~~~~~~----~~~~~W~~~~ 234 (243)
.|.|..+. ......|.|...+. ..|+...+..++.+.+.|.... .+.+.|++++
T Consensus 100 ~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 174 (276)
T 3auv_A 100 QQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQA 174 (276)
T ss_dssp EECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred EEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcC
Confidence 99997654 22335566553210 0122334556788889997653 2589999974
No 495
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.30 E-value=9.3e-12 Score=89.65 Aligned_cols=118 Identities=18% Similarity=0.103 Sum_probs=76.8
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCCE--ec---C---------CCCCeeEEeeccceeEEEEeecCCCCCeeEEE
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDGK--PL---S---------PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTC 180 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 180 (243)
..+.+|++++|.|.+ .+.|.+.+.|+++.. .. . ...+.... .......|.|.+++.+|+|.|.|
T Consensus 11 ~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 88 (242)
T 2znx_A 11 LSVTPGNSVSLSCRA-SQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGS-GSGTDFTLSINSVETEDFGMYFC 88 (242)
T ss_dssp EEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEE-EETTEEEEEESSCCGGGCEEEEE
T ss_pred EEEcCCCcEEEEEEe-CCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEe-cCCCEEEEEECCCChHHCEEEEE
Confidence 456789999999999 688889999998531 11 0 01122222 12335689999999999999999
Q ss_pred EEEccCcce-eeeEEEEEEeecC---------------CCCCeeeeeccceeeeccCcccc----cccceEEeC
Q psy11132 181 VASNTAAQA-RYSSKLQVKGNLN---------------RLPPSYTLVFSQASYMSTSYYSF----EQDSWMIDN 234 (243)
Q Consensus 181 ~~~n~~g~~-~~~~~l~v~~~~~---------------~~~p~~~~~~~~~~~~~~~~~~~----~~~~W~~~~ 234 (243)
.+.|..+.. ...+.|.|...+. ..++...+..++.+.+.|..... +.+.|++++
T Consensus 89 ~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 89 QQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp EECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred eEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 999976532 2345566653211 01122345667888899976543 479999963
No 496
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.29 E-value=1e-11 Score=88.38 Aligned_cols=120 Identities=14% Similarity=0.137 Sum_probs=79.2
Q ss_pred CCCCCCCcEEEEEEeecCCC--CCEEEEEeCC--EecC-----------------CCCCeeEEee-ccceeEEEEeecCC
Q psy11132 115 DGLPEGARTRVICGVTHGDP--PLTIRWLKDG--KPLS-----------------PRFPVNVSDL-DSFSSLLSINSVSA 172 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~~--~~~~-----------------~~~~~~~~~~-~~~~~~l~i~~~~~ 172 (243)
..+.+|+++.|.|.+ .+.+ .+.+.|++.. ..+. ...+...... ......|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 10 GLVKAGGSLILSCGV-SNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp EEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEecCCCCEEEEEEe-cCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 345789999999999 4665 6789999853 2110 0112222221 12357899999999
Q ss_pred CCCeeEEEEEEccCc-----c---eeeeEEEEEEeecCCCCCeeee-------eccceeeeccCcccc-c---ccceEEe
Q psy11132 173 AHSGEYTCVASNTAA-----Q---ARYSSKLQVKGNLNRLPPSYTL-------VFSQASYMSTSYYSF-E---QDSWMID 233 (243)
Q Consensus 173 ~d~g~y~C~~~n~~g-----~---~~~~~~l~v~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~-~---~~~W~~~ 233 (243)
+|+|.|.|.+.|..| . ....+.|.|..... .+|.+.. ..++.+.+.|....+ | .+.|+++
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 167 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAST-KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 167 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSC-BCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTT
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccCCC-cCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecC
Confidence 999999999999865 2 12345777764221 2344432 246778899987655 3 8999999
Q ss_pred CCe
Q psy11132 234 NEN 236 (243)
Q Consensus 234 ~~~ 236 (243)
|..
T Consensus 168 ~~~ 170 (225)
T 1op3_H 168 ALT 170 (225)
T ss_dssp SCC
T ss_pred CCc
Confidence 864
No 497
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.29 E-value=1.3e-11 Score=88.48 Aligned_cols=118 Identities=15% Similarity=0.244 Sum_probs=76.0
Q ss_pred CCCCCCCcEEEEEEeecCCCCCEEEEEeCC--Eec---------------CCCCCeeEEeeccceeEEEEeecCCCCCee
Q psy11132 115 DGLPEGARTRVICGVTHGDPPLTIRWLKDG--KPL---------------SPRFPVNVSDLDSFSSLLSINSVSAAHSGE 177 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~--~~~---------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 177 (243)
..+.+|+++.|.|. . +.|.+.+.|+++. ... ....+............|.|.+++.+|+|.
T Consensus 10 ~~v~~G~~v~L~C~-~-~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 87 (238)
T 2p1y_A 10 KVAVTGGKVTLSCN-Q-TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSV 87 (238)
T ss_dssp EEEETTCCEEEEEE-E-CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred eEEeCCCEEEEEee-c-CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCee
Confidence 44678999999999 3 6788999999852 110 001122222222335689999999999999
Q ss_pred EEEEEEccCcce-----eeeEEEEEEeecC--------------CCCCeeeeeccceeeeccCcccc--cccceEEeC
Q psy11132 178 YTCVASNTAAQA-----RYSSKLQVKGNLN--------------RLPPSYTLVFSQASYMSTSYYSF--EQDSWMIDN 234 (243)
Q Consensus 178 y~C~~~n~~g~~-----~~~~~l~v~~~~~--------------~~~p~~~~~~~~~~~~~~~~~~~--~~~~W~~~~ 234 (243)
|.|.|.|..|.. .....+.|..... ..|..+.+..++.+.+.|..... +.+.|++++
T Consensus 88 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 88 YFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp EEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred EEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 999999986521 1334566653221 11334556778889999976544 589999975
No 498
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.29 E-value=2.2e-10 Score=86.17 Aligned_cols=90 Identities=22% Similarity=0.323 Sum_probs=63.2
Q ss_pred ccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeeecCCCceEEEEeeeeceEEEEeecCCCCCeeEEEEEEeCCC
Q psy11132 12 LSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYLDNSAALSITHVDQYNSMLVIDSVSARHSGNYSCTVRNMVA 91 (243)
Q Consensus 12 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 91 (243)
+...+..+.+.+|++++|.|.+.+..+.+.|.|++++..+.... .... ...+.|.|.++++.|+|.|+|.. .|
T Consensus 9 ~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~-~~~~---~~~~~L~i~~v~~~d~G~Y~C~~---~g 81 (325)
T 1n26_A 9 QEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHP-SRWA---GMGRRLLLRSVQLHDSGNYSCYR---AG 81 (325)
T ss_dssp CCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCC-EEEE---EESSEEEECSCCGGGCEEEEEES---SS
T ss_pred cccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccc-cccc---cccceEEecccchhhCeEeEEEe---CC
Confidence 33334344447999999999985344467999999887652211 1111 22578999999999999999993 56
Q ss_pred cceeEEEEEEEcCCCcc
Q psy11132 92 EDTQVQRLIVNVPPKIE 108 (243)
Q Consensus 92 ~~~~~~~l~v~~~p~~~ 108 (243)
.....+.|.|..+|..+
T Consensus 82 ~~~~~~~L~V~~pP~~P 98 (325)
T 1n26_A 82 RPAGTVHLLVDVPPEEP 98 (325)
T ss_dssp SCSCEEEEEECCCCCCC
T ss_pred EEeeeEEEEeccCCCCC
Confidence 66777889988776543
No 499
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=88.84 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=76.4
Q ss_pred CCCCCCCcEEEEEEeecCC--CCCEEEEEeCCE--ecC------------CCCCeeEEeeccceeEEEEeecCCCCCeeE
Q psy11132 115 DGLPEGARTRVICGVTHGD--PPLTIRWLKDGK--PLS------------PRFPVNVSDLDSFSSLLSINSVSAAHSGEY 178 (243)
Q Consensus 115 ~~~~~g~~~~l~C~~~~~~--p~~~~~W~~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 178 (243)
..+.+|+++.|.|.+ .+. +.+.+.|++... ... ...++... .......|.|.+++.+|+|.|
T Consensus 12 ~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 12 VSGAPGQRVTISCSG-SSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGS-KSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp EEECTTCCEEEEEEC-CTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEE-EETTEEEEEECSCCGGGCEEE
T ss_pred EEEcCCCcEEEEEec-CCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEE-ccCCEEEEEECCCChhhCEEE
Confidence 456789999999999 455 778999998421 110 11122221 223356899999999999999
Q ss_pred EEEEEccCcc---eeeeEEEEEEeecCC----------------------CCCeeeeeccceeeeccCccc----ccccc
Q psy11132 179 TCVASNTAAQ---ARYSSKLQVKGNLNR----------------------LPPSYTLVFSQASYMSTSYYS----FEQDS 229 (243)
Q Consensus 179 ~C~~~n~~g~---~~~~~~l~v~~~~~~----------------------~~p~~~~~~~~~~~~~~~~~~----~~~~~ 229 (243)
.|.+.|..+. ....+.|.|...... .++...+..++.+.+.|.... .+.+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 9999986542 223456666532210 112234566888899997754 35899
Q ss_pred eEEeC
Q psy11132 230 WMIDN 234 (243)
Q Consensus 230 W~~~~ 234 (243)
|+|++
T Consensus 170 W~r~~ 174 (256)
T 3ux9_B 170 WVRQA 174 (256)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99983
No 500
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.28 E-value=5.1e-12 Score=98.98 Aligned_cols=92 Identities=18% Similarity=0.360 Sum_probs=69.6
Q ss_pred CCCccCCCCCcccccCCeEEEEEEeeCCCCCceeEEEECCeee-cCC---CceEEEEeeeeceEEEEeecCCCCCeeEEE
Q psy11132 9 PPKLSPTNPERTLNVGERASLICSITKGDIPLTIKWLKDGRYL-DNS---AALSITHVDQYNSMLVIDSVSARHSGNYSC 84 (243)
Q Consensus 9 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~v~W~~~~~~~-~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 84 (243)
+|.+...+....+.+|++++|.|.+ +.|.+.+.|++++..+ ... .++... ..++|.|.+++.+|+|.|+|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~--~~p~p~i~W~~~~~~~~~~~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C 414 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA--STSLTSVSWITPNGTVMTHGAYKVRIAVL----SDGTLNFTNVTVQDTGMYTC 414 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE--SSTTSEEEEECTTSCEEESSSCCSSEEEC----TTCCEEESSCCSTTCEEEEE
T ss_pred CCcccccccceeeccCceEEEEeec--CCCCCceEEEeCCCceeeccCCCceEEEc----cCCeEEEccCChhhCEEEEE
Confidence 5677777778889999999999998 3477799999955433 322 122211 24579999999999999999
Q ss_pred EEEeCCCcceeEEEEEEEcCCC
Q psy11132 85 TVRNMVAEDTQVQRLIVNVPPK 106 (243)
Q Consensus 85 ~~~~~~~~~~~~~~l~v~~~p~ 106 (243)
.|.|..|..+.++.+.|..+|.
T Consensus 415 ~a~N~~G~~~~~~~~~v~~~~~ 436 (440)
T 3zyj_A 415 MVSNSVGNTTASATLNVTGTHH 436 (440)
T ss_dssp EEECSSCEEEEEEEEEEC----
T ss_pred EEEcCCCcEEEEEEEEEecccc
Confidence 9999999999999999887664
Done!