RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11135
(191 letters)
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 147 bits (372), Expect = 3e-46
Identities = 136/165 (82%), Positives = 150/165 (90%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
M EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGET LLDILDTAG
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 120
QEEYSAMRDQYMRTGEGFL VFA+N+ KSFEDI YREQIKRVKD+++VPMVLVGNKCDL
Sbjct: 61 QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL 120
Query: 121 STWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ V+ QAQ+LA + IP+I+TSAKTR GV+DAFYTLVREI++
Sbjct: 121 AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 165
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 143 bits (362), Expect = 1e-44
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETALLDILDTAGQE 62
+KL+++G GVGK+ + + ++ F + TI ++ + + +DG+ L I DTAGQE
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ + Y R G +LV+ + + KSF++I ++ I+ A+ M+L
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDK 126
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V + ++LA + I F++TSAK + V++AF+TL R+IK
Sbjct: 127 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKA 169
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 139 bits (352), Expect = 4e-43
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETALLDILDTAGQE 62
K++++G GVGKS L ++ +++ F + TI ++ K V I+G+ L I DTAGQE
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ + Y R G +LV+ + ++F +I + + +E ++LVGNK D+ T
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWF-KTVNEHANDEAQLLLVGNKSDMET 121
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V +Q + LA++ IPFI++SAK V++ F+TL + I++
Sbjct: 122 RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 164
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 138 bits (349), Expect = 1e-42
Identities = 80/165 (48%), Positives = 126/165 (76%), Gaps = 1/165 (0%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
M EYK+VV+G+GGVGKSALT+Q + F+++YDPTIED YRK++ +D ++L+ILDTAG
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 120
E++++MRD Y++ G+GF+LV+++ + +SF+DI R+QI RVK E+VP++LVGNK DL
Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL 120
Query: 121 STWAVDM-NQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIK 164
+ ++ + LAE++ PF++TSAK++ VD+ F +VR++
Sbjct: 121 ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMN 165
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 135 bits (341), Expect = 2e-41
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETALLDILDTAGQE 62
+K+V++G GVGK+ L + Q F TI D K V I+GE L I DTAGQE
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGN-KCDLS 121
+ ++ Y R+ +L + + +SF + + +I++ +V VLVGN
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS-NKVITVLVGNKIDLAE 124
Query: 122 TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREI 163
V +A+E +E ++ +++TSAK V+ F L +
Sbjct: 125 RREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 135 bits (340), Expect = 3e-41
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETALLDILDTA 59
+ K++++G GVGKS+L ++ + F E TI D K + +DG A L I DTA
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
Query: 60 GQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 119
GQE + + Y R +G +LV+ V +F + ++ +++ ++ +LVGNK D
Sbjct: 65 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID 124
Query: 120 LSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKML 169
VD N+ + A + ++ FI+ SAKT GV AF LV +I + L
Sbjct: 125 KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 174
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 132 bits (332), Expect = 4e-40
Identities = 89/166 (53%), Positives = 126/166 (75%), Gaps = 1/166 (0%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
+A +K+++VG+GGVGKSALT+Q + + FV++Y+PT DSYRK+VV+DGE +DILDTAG
Sbjct: 2 LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAG 61
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 120
QE+Y+A+RD Y R+GEGFL VF++ M+SF +REQI RVK+ E VP +LVGNK DL
Sbjct: 62 QEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDL 121
Query: 121 -STWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V + +A+ A+Q+N+ +++TSAKTR VD F+ L+REI+
Sbjct: 122 EDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRA 167
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 130 bits (328), Expect = 1e-39
Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDE-YDPTIEDSYRKQ-VVIDGETALLDILDTAGQ 61
+K+++VG GVGK+ L ++ F+ + T+ +R + + +DG L + DTAGQ
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 62 EEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLS 121
E + ++ Y R LL++ V + SF++I ++ +I + M+L
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 126
Query: 122 TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V ++LA+++ +PF++TSAKT + VD AF + +E+K+
Sbjct: 127 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKR 170
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 130 bits (328), Expect = 1e-39
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETALLDILDTAGQE 62
+K +++G GVGKS L Q + F+ + TI + +++ + G+ L I DTAGQE
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ A+ Y R G L+V+ + ++ + S+ + + + ++L+GNK DL
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTN-PNTVIILIGNKADLEA 123
Query: 123 WAVDM-NQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREI 163
+A++ AE+ + F++ SAKT V+DAF ++I
Sbjct: 124 QRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 130 bits (327), Expect = 3e-39
Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETALLDILDTAGQE 62
+K+V++G GVGKS L + +N F E TI + + + +DG+T I DTAGQE
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
Y + Y R G LLV+ + ++E++ + ++++ D + ++LVGNK DL
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD-SNIVIMLVGNKSDLRH 123
Query: 123 W-AVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
AV ++A+ AE+ N+ FI+TSA V++AF ++ EI +
Sbjct: 124 LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR 167
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 128 bits (323), Expect = 7e-39
Identities = 93/167 (55%), Positives = 127/167 (76%), Gaps = 2/167 (1%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
M EYKLVV+G+GGVGKSALT+Q +Q FV++YDPTIEDSYRKQV +D + +L+ILDTAG
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD- 119
E+++AMRD YM+ G+GF LV+++ + +F D+ REQI RVKD E+VPM+LVGNKCD
Sbjct: 61 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL 120
Query: 120 LSTWAVDMNQAQELAEQF-NIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V Q Q LA Q+ N F+++SAK+++ V++ FY LVR+I +
Sbjct: 121 EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINR 167
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 129 bits (324), Expect = 9e-39
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVI-----------DGETAL 52
KL+ +G GVGK+ + N F ++ T+ +R++ V+
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 53 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMV 112
L + DTAGQE + ++ + R GFLL+F + S +SF ++ ++ Q++ E +V
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 125
Query: 113 LVGNKCDLSTWAVDM-NQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
L+GNK DL QA+ELA+++ IP+ +TSA T V+ A TL+ I K
Sbjct: 126 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 179
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 127 bits (320), Expect = 2e-38
Identities = 92/166 (55%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
+KLVVVG GGVGKSALTIQ IQ++FV +YDPTIEDSY K +DG A LDILDTAGQE
Sbjct: 6 THKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQE 65
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
E+ AMR+QYMR G GFLLVFA+N +SF ++G QI RVKD ++ P+VLVGNK DL +
Sbjct: 66 EFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLES 125
Query: 123 WAV-DMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDK 167
++A ++ + + SAK R+ VD+AF LVR ++K +
Sbjct: 126 QRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQ 171
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 127 bits (319), Expect = 6e-38
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETALLDILDTAGQE 62
+KL+++G GVGKS L ++ + + ++Y TI ++ K V +DG+T L I DTAGQE
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD-LS 121
+ + Y R G ++V+ V +SF + + ++I R V +LVGNKCD
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT-STVLKLLVGNKCDLKD 125
Query: 122 TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK---DKMLRGKEKKKRG 178
V+ + A+E A+ +PF++TSA V+DAF T+ R+IK+ + L +KK
Sbjct: 126 KRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKED 185
Query: 179 ISGNKLK 185
LK
Sbjct: 186 KGNVNLK 192
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 125 bits (315), Expect = 1e-37
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVI-DGETALLDILDTAGQE 62
+KLV +G VGK++L + + + F + Y TI + + + + T L + DTAGQE
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLS- 121
+ ++ Y+R ++V+ + ++ SF+ + + ++ + +V ++LVGNK DL+
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLAD 119
Query: 122 TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREI 163
V + + + A++ N+ FI+TSAK V F + +
Sbjct: 120 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 124 bits (313), Expect = 3e-37
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETALLDILDTAGQE 62
+K +++G GVGKS L +Q F +D TI + ++V IDG+ L I DTAGQE
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ ++ Y R G LLV+ + ++F + S+ E ++ + + ++L+GNK DL +
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ-HSSSNMVIMLIGNKSDLES 122
Query: 123 WAVDMNQ-AQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ + A + + F++TSAKT V++AF +EI +
Sbjct: 123 RRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYR 166
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 121 bits (304), Expect = 7e-36
Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETALLDILDTAGQE 62
+K++++G GGVGKS+L + + N F + TI + + + +DG + I DTAGQE
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEE---VPMVLVGNKCD 119
+ ++R + R + LL F+V+ +SF+++ +++++ D +E P V++GNK D
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 126
Query: 120 LSTWAVDMNQAQELA-EQFNIPFIKTSAKTRMGVDDAFYTLVREI 163
+S V +AQ + + P+ +TSAK V AF VR +
Sbjct: 127 ISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 120 bits (302), Expect = 1e-35
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETALLDILDTAGQE 62
+K++++G VGK++ + + F + T+ ++ K + + + L I DTAGQE
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
Y + Y R GF+L++ + + +SF + + QIK +++
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 125
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V + ++LA+ F + SAK + V F LV I +
Sbjct: 126 RVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICE 168
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 120 bits (302), Expect = 1e-35
Identities = 95/167 (56%), Positives = 121/167 (72%), Gaps = 2/167 (1%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
+ YKLVVVG GGVGKSALTIQ Q FV +YDPTIEDSY K ID + A+LD+LDTAG
Sbjct: 2 LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG 61
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 120
QEE+SAMR+QYMRTG+GFL+V++V SFE + + + I RVKD E PM+LV NK DL
Sbjct: 62 QEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL 121
Query: 121 STW-AVDMNQAQELAEQFNIPFIKTSAKTR-MGVDDAFYTLVREIKK 165
V +Q +E+A ++NIP+I+TSAK + VD F+ LVR I++
Sbjct: 122 MHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQ 168
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 120 bits (302), Expect = 1e-35
Identities = 102/166 (61%), Positives = 125/166 (75%), Gaps = 1/166 (0%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
+Y+LVVVG GGVGKSALTIQ IQ++FV +YDPTIEDSY KQ VID A LDILDTAGQE
Sbjct: 5 KYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQE 64
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
E+ AMR+QYMRTGEGFLLVF+V SFE+I ++ QI RVKD +E PM+L+GNK DL
Sbjct: 65 EFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDH 124
Query: 123 W-AVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDK 167
V + Q+LA Q + +++ SAK RM VD AF+ LVR I+K +
Sbjct: 125 QRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQ 170
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 120 bits (300), Expect = 3e-35
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQ-VVIDGETALLDILDTAGQE 62
+K +V+G G GKS L Q I+ F D+ + TI + + + + G+ L I DTAGQE
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ ++ Y R G LLV+ + S +++ + ++ + + + + ++L GNK DL
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-QNIVIILCGNKKDLDA 124
Query: 123 WAVDM-NQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+A A++ + F++TSA T V++AF R+I
Sbjct: 125 DREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILN 168
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 120 bits (300), Expect = 4e-35
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L + DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 120
QE+Y +R + FL+ F+V S SFE++ + P +LVG + DL
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDL 119
Query: 121 -------------STWAVDMNQAQELAEQFN-IPFIKTSAKTRMGVDDAFYTLVREIKKD 166
+ A++LA + +++ SA T+ G+ + F +
Sbjct: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA--- 176
Query: 167 KMLRGKEKKKRGISGNKLKQCCVLL 191
L E KK + CVLL
Sbjct: 177 --LEPPEPKK--------SRRCVLL 191
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 118 bits (295), Expect = 1e-34
Identities = 44/163 (26%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETALLDILDTAGQE 62
+K+V++G G VGK++L ++ +N F D++ T+ S+ K++ I G+ L I DTAGQE
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ A+ Y R G +LV+ + SF+ + ++ ++++++ E ++
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKE 123
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
V + +A+ AE TSAK G+++ F L + + +
Sbjct: 124 RHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 166
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 116 bits (291), Expect = 6e-34
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
+Y++ V GAGGVGKS+L ++ ++ F + Y PT+ED+YR+ + D L I DT G
Sbjct: 2 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSH 61
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVK-DAEEVPMVLVGNKCDLS 121
++ AM+ + G F+LV+++ S +S E++ EQI +K D E +P++LVGNKCD S
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 121
Query: 122 -TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKM 168
+ V ++A+ LA + F++TSAK V + F L+ K+ +
Sbjct: 122 PSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTV 169
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 114 bits (285), Expect = 6e-33
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
K VVVG G VGK+ L I N F EY PT+ D+Y V++DG+ L + DTAGQE
Sbjct: 5 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQE 64
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-- 120
+Y +R + L+ F++ S SFE++ + P++LVG K DL
Sbjct: 65 DYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPE-VRHHCPNTPIILVGTKLDLRD 123
Query: 121 -----------STWAVDMNQAQELAEQFN-IPFIKTSAKTRMGVDDAFYTLVREI 163
+ Q +A++ + +++ SA T+ G+ F +R +
Sbjct: 124 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 178
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 113 bits (284), Expect = 7e-33
Identities = 47/167 (28%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETALLDILDTA 59
+ ++KLV++G VGKS+L ++ ++ F + + TI ++ Q V +D T +I DTA
Sbjct: 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 60 GQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 119
GQE Y ++ Y R + ++V+ + + +SF ++ ++++R V +
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 120 LSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKD 166
+ AVD +AQ A+ ++ F++TSAKT M V++ F + +++ K+
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN 170
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 111 bits (278), Expect = 4e-32
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETALLDILDTA 59
+ E K+ ++G GVGKS++ + +++ F +PTI K V E I DTA
Sbjct: 2 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 61
Query: 60 GQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 119
G E + A+ Y R ++V+ + ++F + ++ ++++ V +
Sbjct: 62 GLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 121
Query: 120 LSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIK 164
V A++ A+ + F++TSAK + +++ F + R I
Sbjct: 122 TDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 166
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 111 bits (278), Expect = 7e-32
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEE 63
K VVVG G VGK+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL--- 120
Y +R + FL+ F+V + SF+++ + + A VP +L+G + DL
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRDD 128
Query: 121 ----------STWAVDMNQAQELAEQFN-IPFIKTSAKTRMGVDDAFYTLVREI 163
+ + Q Q+LA++ +++ SA T+ G+ F + I
Sbjct: 129 PKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 107 bits (268), Expect = 2e-30
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV--IDGETALLDILDTAGQ 61
K++++G GVGK++L + + + + +Y TI + + V + A + + DTAGQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 62 EEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKR---VKDAEEVPMVLVGNKC 118
E + ++ + R + +LV+ V + SFE+I S+R++ V E P V++GNK
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 119 DLSTWAVDMNQAQEL---AEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
D +++ +IP TSAK + VD AF + R +
Sbjct: 123 DAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 172
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 107 bits (266), Expect = 2e-30
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRK-QVVIDGETALLDILDTAGQE 62
+K++V+G VGK+ LT + F D + TI +R+ V IDGE + + DTAGQE
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 63 EY-SAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLS 121
+ +M Y R + V+ + +M SF + ++ E+ K+ A ++P +LVGNKCDL
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 122
Query: 122 TWAVDM-NQAQELAEQFNIPFIKTSAKTRM---GVDDAFYTL 159
+ + AQ+ A+ ++P +TSAK V+ F TL
Sbjct: 123 SAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 106 bits (265), Expect = 3e-30
Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 2 AEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQ 61
AE KL + G GVGKSAL ++ + F+ EYDPT+E +YR Q ID E ++I
Sbjct: 1 AEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI-LDTAG 59
Query: 62 EEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLS 121
+E + R+ +MR GEGF+LV+ + SFE++ + + +K + V ++LVGNK DL
Sbjct: 60 QEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLD 119
Query: 122 TW-AVDMNQAQELAEQFNIPFIKTSAKTRMG-VDDAFYTLVREIKKDKM 168
V + ++LA + F + SA T G + + FY L RE+++ +M
Sbjct: 120 HSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRM 168
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 105 bits (263), Expect = 7e-30
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
K+ ++G VGKS+LTIQ ++ FVD YDPTIE+++ K + ++G+ L ++DTAGQ+
Sbjct: 4 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQD 63
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-S 121
EYS Y G++LV++V S+KSFE I ++ + ++P++LVGNK DL
Sbjct: 64 EYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHM 123
Query: 122 TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ + + LAE +N F+++SAK D F ++ E +K
Sbjct: 124 ERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEK 167
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 105 bits (261), Expect = 1e-29
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-ETALLDILDTAGQEE 63
KLV++G VGKS++ ++ + N F + +PTI ++ Q V T +I DTAGQE
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTW 123
++++ Y R + L+V+ V +SF + +++ +++ + LVGNK D+
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQAS-KDIIIALVGNKIDMLQE 123
Query: 124 AVDMNQAQE----LAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ A+E LAE+ + F +TSAKT V+D F + +I
Sbjct: 124 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPL 169
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 104 bits (258), Expect = 6e-29
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIED-SYRKQVVIDGETALLDILDTAGQE 62
K++++G GVGK++L Q + F ++Y TI K+V++D + I DTAGQE
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVK---DAEEVPMVLVGNKCD 119
+ ++ + R + +LVF V + +F+ + S+R++ D E P V++GNK D
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 122
Query: 120 LSTWAVDMNQAQEL-AEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLR 170
L V +AQ + NIP+ +TSAK + V+ AF T+ R K +
Sbjct: 123 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 174
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 102 bits (255), Expect = 1e-28
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEE 63
KLV+VG G GK+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAG E+
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD---- 119
Y +R + L+ F+++S S E+I + VP++LVGNK D
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 121
Query: 120 ---------LSTWAVDMNQAQELAEQFN-IPFIKTSAKTRMGVDDAFYTLVREI 163
+ V + +++A + +++ SAKT+ GV + F R
Sbjct: 122 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 175
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 97.5 bits (241), Expect = 1e-26
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETALLDILDTAGQEE 63
K+VVVG G VGKS++ + + F +Y TI D +Q+ ++ E L + DTAGQEE
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTW 123
+ A+ Y R + +LVF+ +SFE I S+RE++ +V L
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALV-QNKIDLLDDS 122
Query: 124 AVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREI 163
+ +A+ LA++ + F +TS K + V + F L +
Sbjct: 123 CIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 97.0 bits (240), Expect = 2e-26
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRK-QVVIDGETALLDILDTAGQE 62
+KLV+VG GG GK+ + + F +Y T+ + ++ DTAGQE
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
++ +RD Y + +++F V S +++++ ++ + RV E +P+VL GNK D+
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIVLCGNKVDIKD 121
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKML 169
V + N+ + SAK+ + F L R++ D L
Sbjct: 122 RKVKAKSIVF-HRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNL 167
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 97.0 bits (240), Expect = 2e-26
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 16/176 (9%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEY 64
K+VVVG GK+AL ++ F + Y PT+ ++Y ID + L + DT+G Y
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 63
Query: 65 SAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST-- 122
+R + L+ F ++ ++ + + + + + M+LVG K DL T
Sbjct: 64 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ-EFCPNTKMLLVGCKSDLRTDV 122
Query: 123 -----------WAVDMNQAQELAEQFNI-PFIKTSAKTRM-GVDDAFYTLVREIKK 165
V +Q +A+Q +I+ SA V D F+
Sbjct: 123 STLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 178
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 94.3 bits (233), Expect = 3e-25
Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 8/166 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E +++++G GK+ + +L V TI + + ++ D GQ+
Sbjct: 12 EMRILMLGLDAAGKTTILYKLKLGQSVT----TIPTVGFNVETVTYKNVKFNVWDVGGQD 67
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-- 120
+ + Y +G + V ++ +I ++ + +++ NK DL
Sbjct: 68 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 127
Query: 121 --STWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIK 164
+ N + A + G+ + L K
Sbjct: 128 AMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 173
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 92.5 bits (228), Expect = 1e-24
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHF--VDEYDPTIEDSYRKQVVIDGETALLDILDTAGQ 61
Y++V++G GVGKS L H + + ED+Y + +++DGE+A + +LD
Sbjct: 4 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 63
Query: 62 EEYSAMRDQYMRTGE-GFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 120
+ + + +L+V+++ SFE R Q++R + E++P++LVGNK DL
Sbjct: 64 KGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDL 123
Query: 121 STWAV-DMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDK 167
+++ + A F+ FI+TSA + V + F +VR+++ +
Sbjct: 124 VRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRR 171
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 91.2 bits (225), Expect = 5e-24
Identities = 33/173 (19%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
+ E +L V+G GKS+L + + + + T + Y+K++++DG+T L+ I + AG
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAG 61
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEE--VPMVLVGNKC 118
+ + VF++ SF+ + Q+ ++ + + LVG +
Sbjct: 62 APDAKFSGWADA-----VIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQD 116
Query: 119 DLSTWAVDMNQAQEL----AEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDK 167
+S + + A+ + +T A + VD F + +++ +
Sbjct: 117 RISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLR 169
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 89.3 bits (220), Expect = 1e-23
Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 8/163 (4%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEY 64
++++VG GK+ + +L V TI ++ + + D GQ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 65 SAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL---- 120
+ Y + +G + V N + + ++ + + +++ NK DL
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 117
Query: 121 STWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREI 163
+ + N T A + G+ + L ++
Sbjct: 118 NAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 88.6 bits (218), Expect = 3e-23
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEE 63
YK++++GA GVGKSAL +Y + +V+DGE A L + D Q+
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 60
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTW 123
+ M G+ +++V++V SFE R Q++R + ++VP++LVGNK DL
Sbjct: 61 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRS 120
Query: 124 AVDM-NQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDK 167
++ + A F+ FI+TSA V F +VR+I+ +
Sbjct: 121 REVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 165
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 89.3 bits (220), Expect = 3e-23
Identities = 24/170 (14%), Positives = 59/170 (34%), Gaps = 8/170 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E +++++G G GK+ + +L V + + + L++ D GQ
Sbjct: 17 ELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE----TLSYKNLKLNVWDLGGQT 72
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
Y + V + + ++ ++ +++ NK D
Sbjct: 73 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 132
Query: 123 WAVDMNQAQELAEQF----NIPFIKTSAKTRMGVDDAFYTLVREIKKDKM 168
++EL + + +SA G+ + L+ IK++++
Sbjct: 133 ALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEEQL 182
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 85.5 bits (210), Expect = 5e-22
Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 7/166 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E +L +VG GK+ + F ++ PT+ I + + D GQ
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTV---GFNMRKITKGNVTIKLWDIGGQP 58
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ +M ++Y R + + + E + + + +P++++GNK DL
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 118
Query: 123 WAVDMNQAQELAEQF----NIPFIKTSAKTRMGVDDAFYTLVREIK 164
+ +++ I S K + +D L++ K
Sbjct: 119 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSK 164
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 85.8 bits (211), Expect = 6e-22
Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 8/165 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E +++++G GK+ L QL + Q + L++ D GQ
Sbjct: 16 EVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQS----QGFKLNVWDIGGQR 71
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ Y + + V K FE+ G ++ + VP+++ NK DL T
Sbjct: 72 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 131
Query: 123 WAVDMNQAQELAEQF----NIPFIKTSAKTRMGVDDAFYTLVREI 163
A A+ L SA T GV D + + +
Sbjct: 132 AAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 85.4 bits (210), Expect = 7e-22
Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 8/166 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E+K+++VG GK+ + Q N V I + D GQE
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTI----GSNVEEIVINNTRFLMWDIGGQE 70
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-- 120
+ + Y E ++V + ++ +D + +++ NK D+
Sbjct: 71 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKE 130
Query: 121 --STWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIK 164
+ + + A T G+ ++ +K
Sbjct: 131 CMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 176
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 84.0 bits (206), Expect = 2e-21
Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E +L+++G GK+ + + D PT+ + + + +I D GQ+
Sbjct: 2 ELRLLMLGLDNAGKTTILKKFNGEDV-DTISPTLGFNIKTLEHRGFKL---NIWDVGGQK 57
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ Y + +G + V + +D + + + +++ NK DL
Sbjct: 58 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPG 117
Query: 123 WAVDMNQAQELAEQF----NIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ L + SA T + L+ +I
Sbjct: 118 ALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISS 164
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 84.0 bits (206), Expect = 2e-21
Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 8/169 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E +++++G G GK+ + +L V TI + + + D G
Sbjct: 5 EMRILILGLDGAGKTTILYRLQVGEVVT----TIPTIGFNVETVTYKNLKFQVWDLGGLT 60
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
Y + + V S + ++ + +V+ NK D+
Sbjct: 61 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQ 120
Query: 123 WAVDMNQAQELAEQF----NIPFIKTSAKTRMGVDDAFYTLVREIKKDK 167
A L KTSA G+D+A LV +K +
Sbjct: 121 AMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 169
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 69.7 bits (169), Expect = 6e-16
Identities = 29/168 (17%), Positives = 54/168 (32%), Gaps = 15/168 (8%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEY 64
KL+ +G GK+ L L + PT + + D G +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLA-TLQPTW---HPTSEELAIGNIKFTTFDLGGHIQA 57
Query: 65 SAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWA 124
+ Y G + + + F++ + + + + ++VP V++GNK D
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 117
Query: 125 VDMNQAQEL-----------AEQFNIPFIKTSAKTRMGVDDAFYTLVR 161
+ L Q + S R G +AF L +
Sbjct: 118 SEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 68.2 bits (165), Expect = 3e-15
Identities = 24/177 (13%), Positives = 48/177 (27%), Gaps = 20/177 (11%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
KLV +G GK+ L L + S + D G
Sbjct: 13 TGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE----LTIAGMTFTTFDLGGHI 68
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ + Y+ G + + + + + + + VP++++GNK D
Sbjct: 69 QARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPE 128
Query: 123 WAVDMNQAQELAEQF----------------NIPFIKTSAKTRMGVDDAFYTLVREI 163
+ + + S R G + F + + I
Sbjct: 129 AISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 54.6 bits (130), Expect = 4e-10
Identities = 30/198 (15%), Positives = 50/198 (25%), Gaps = 46/198 (23%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E KL+++GAG GKS + Q+ H + + D GQ
Sbjct: 2 EVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETH--------FTFKDLHFKMFDVGGQR 53
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKS----------FEDIGSYREQIKRVKDAEEVPMV 112
+ A++ + + I K + ++
Sbjct: 54 SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSII 113
Query: 113 LVGNKC----------DLSTWAVDMNQ-------AQELAEQF----------NIPFIKTS 145
L NK L+ + A + QF I T
Sbjct: 114 LFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC 173
Query: 146 AKTRMGVDDAFYTLVREI 163
A V F V ++
Sbjct: 174 ATDTKNVQFVF-DAVTDV 190
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 54.4 bits (130), Expect = 5e-10
Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 19/176 (10%)
Query: 2 AEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQ 61
A ++L+++GAG GKS + Q+ H V T + + + D GQ
Sbjct: 5 ATHRLLLLGAGESGKSTIVKQMRILHVV----LTS---GIFETKFQVDKVNFHMFDVGGQ 57
Query: 62 EEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYR----------EQIKRVKDAEEVPM 111
+ Q + V A +S + + I + + +
Sbjct: 58 RDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISV 117
Query: 112 VLVGNKCDLSTWAVDMN--QAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+L NK DL V + ++ +F A G D I+
Sbjct: 118 ILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRD 173
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 53.9 bits (128), Expect = 8e-10
Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEY 64
++ VG GK+ L ++L+ + D +I DS V + L ++D G E
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 65 SAMRDQ--YMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDA--EEVPMVLVGNKCDL 120
+V + + +D+ + Q+ A +++ NK D+
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDI 120
Query: 121 STWAVDMNQAQELAEQFNIPFIKTSAKTRMGVD 153
+ A Q+ E+ T + +D
Sbjct: 121 AM-AKSAKLIQQQLEKELNTLRVTRSAAPSTLD 152
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 50.7 bits (120), Expect = 1e-08
Identities = 22/177 (12%), Positives = 59/177 (33%), Gaps = 8/177 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
K++++GAG GKS Q+ + DPT + + + ++D GQ
Sbjct: 2 LVKILLLGAGESGKSTFLKQM---RIIHGQDPTKGI---HEYDFEIKNVPFKMVDVGGQR 55
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ + L + + + ++ ++ +
Sbjct: 56 SERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESL--NIFETIVNNRVFSNVS 113
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGKEKKKRGI 179
+ +N+ L E+ + IK G + + + + + +++++R +
Sbjct: 114 IILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRPL 170
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 48.8 bits (115), Expect = 4e-08
Identities = 26/177 (14%), Positives = 52/177 (29%), Gaps = 8/177 (4%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
E KL+++G G GKS Q+ H PT D ++ + ++D GQ
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIE---YPFDLQSVIFRMVDVGGQR 56
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
+ + A++ +++ K ++ S+
Sbjct: 57 SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESK--ALFRTIITYPWFQNSS 114
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGKEKKKRGI 179
+ +N+ L E+ + G RE + + I
Sbjct: 115 VILFLNKKDLLEEKIMYSHLVDYFPEYDG-PQRDAQAAREFILKMFVDLNPDSDKII 170
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 42.8 bits (99), Expect = 4e-06
Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 4/161 (2%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEY 64
K+V+ G GKS+L L D + I + L I+DTAG E
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREA 62
Query: 65 SAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWA 124
S ++ + A + + + + + + A
Sbjct: 63 SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKA 122
Query: 125 VDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ ++E I+ SA+T GVD L +K+
Sbjct: 123 DITGETLGMSEVNGHALIRLSARTGEGVDV----LRNHLKQ 159
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 43.1 bits (100), Expect = 4e-06
Identities = 24/201 (11%), Positives = 60/201 (29%), Gaps = 26/201 (12%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
+ +++ G GK++L L + S D + + + ++D G
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLLTTDSVR-----PTVVSQEPLSAADYDGSGVTLVDFPGHV 57
Query: 63 EYSAMRDQYMRTG-----EGFLLVFAVNSMKSFEDIGSYREQIKRV---KDAEEVPMVLV 114
+ Y++T +V + K + I + + +++
Sbjct: 58 KLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIA 117
Query: 115 GNKCDLSTWAVDMNQAQELAEQ----------FNIPFIKTSAKTRMGVDDAFYTLVREIK 164
NK +L T A ++ ++ E ++ ++ ++ L +
Sbjct: 118 CNKSELFT-ARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVL--QST 174
Query: 165 KDKMLRGKEKKKRGISGNKLK 185
E G+ K
Sbjct: 175 DGFKFANLEASVVAFEGSINK 195
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 40.0 bits (92), Expect = 4e-05
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNH--FVDEYDPTIEDSYRKQVVIDGETALL-----DILD 57
++V+VG VGKS L +L+ V + T D +++VI G + +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 58 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNK 117
T E + + +++F +++ E K ++ + ++V NK
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASS-----PLDEEDRKILERIKNKRYLVVINK 116
Query: 118 CDLSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVRE 162
D+ + +L + +K SA G++ ++ RE
Sbjct: 117 VDVVEKINEEEIKNKLG--TDRHMVKISALKGEGLEKLEESIYRE 159
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 38.5 bits (88), Expect = 2e-04
Identities = 33/176 (18%), Positives = 55/176 (31%), Gaps = 21/176 (11%)
Query: 5 KLVVVGAGGVGKSALTIQLIQ--NHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
K+ +VG VGKS L ++ V T D +V IDG +DTAG
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKY--VFVDTAGLR 67
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNS-----MKSFEDIGSYREQIKRVKDAEEVPMVLVGNK 117
S + + + + +V ++ + G R+ + E V
Sbjct: 68 RKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVF 127
Query: 118 CDLSTWAVDMNQAQELAEQF--------NIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ E + F P I TSA +D ++ +
Sbjct: 128 NKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDR----MIDAMNL 179
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 38.6 bits (88), Expect = 2e-04
Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 10/171 (5%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG------ETALLDILDT 58
++ + G VGKS+ LI + + I +
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 59 AGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKC 118
+ E + R L V + + Q+ +P++++ K
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKA 144
Query: 119 DLSTWAVDMNQAQELAEQFNI----PFIKTSAKTRMGVDDAFYTLVREIKK 165
D A+ + + NI I S++T+ G D+A+ + + I +
Sbjct: 145 DKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR 195
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 38.4 bits (88), Expect = 2e-04
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 32 YDPTIEDSYRKQVVIDGETALLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFE 91
Y + +D G E A +G +LV A N
Sbjct: 67 YVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQP 126
Query: 92 DIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWAVDMNQAQELAEQF------NIPFIKTS 145
RE + +++V NK D+ + ++Q +++ + N+P I S
Sbjct: 127 Q---TREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVS 183
Query: 146 AKTRMGVDDAFYTLVREIK 164
A ++ +D + IK
Sbjct: 184 ALHKINIDSLIEGIEEYIK 202
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 38.1 bits (87), Expect = 2e-04
Identities = 24/179 (13%), Positives = 46/179 (25%), Gaps = 21/179 (11%)
Query: 7 VVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYSA 66
+ G VGKS L +L P + + + + +
Sbjct: 4 IFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKEV 63
Query: 67 MRDQYMRTGEGFL----------LVFAVNSMKSFEDIGSYREQIKRVKD------AEEVP 110
LV + R +I + ++P
Sbjct: 64 QERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIP 123
Query: 111 MVLVGNKCD-LSTWAVDMNQAQE----LAEQFNIPFIKTSAKTRMGVDDAFYTLVREIK 164
++ NK D + +N E + + FI SAK ++ + I+
Sbjct: 124 TIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEVIR 182
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 37.8 bits (86), Expect = 2e-04
Identities = 22/162 (13%), Positives = 48/162 (29%), Gaps = 11/162 (6%)
Query: 4 YKLVVVGAGGVGKSALTIQLI-QNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQE 62
++ G GKS+ L Q + L+D+ E
Sbjct: 17 IEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAE 76
Query: 63 EYSAMRDQYMRTGEGF--------LLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLV 114
M+ ++ R + LV ++ +D+ + + + ++
Sbjct: 77 VPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTK 136
Query: 115 GNKCDLSTWAVDMNQAQELAEQF--NIPFIKTSAKTRMGVDD 154
+K +N +E F ++ S+ + GVD
Sbjct: 137 ADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDK 178
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 38.2 bits (88), Expect = 4e-04
Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 11/154 (7%)
Query: 2 AEYKLVVVGAGGVGKSALTIQLIQNHFVDE------YDPTIEDSYRKQVVIDGETALLDI 55
+ + V G G GKS+ L +E + + + +
Sbjct: 55 SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPN---VVF 111
Query: 56 LDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVG 115
D G + D Y+ + + + S I + + V
Sbjct: 112 WDLPGIGSTNFPPDTYLE--KMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVR 169
Query: 116 NKCDLSTWAVDMNQAQELAEQFNIPFIKTSAKTR 149
K D + Q ++ + I+ +
Sbjct: 170 TKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNT 203
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 37.2 bits (85), Expect = 4e-04
Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 8 VVGAGGVGKSALTIQLIQNHF--VDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYS 65
+VG VGKS L + D + T+ + DG + + D G E +
Sbjct: 6 LVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRS--FVMADLPGLIEGA 63
Query: 66 ----AMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLS 121
+ Q++R E ++ V M E Y + + ++ E + L +
Sbjct: 64 HQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIV 123
Query: 122 TWAVDMNQAQELAEQF------NIPFIKTSAKTRMGVDDAFYTLVREIK 164
+DM +A E E F + P SA TR G+ + + + +++
Sbjct: 124 ANKMDMPEAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLE 172
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 36.9 bits (84), Expect = 5e-04
Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 12/167 (7%)
Query: 8 VVGAGGVGKSALTIQLIQNHF--VDEYDPTIEDSYRKQVVIDGETALLDILDTAGQ---- 61
+VG GKS+L + + H T+ + V + E + D G
Sbjct: 6 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEER--FTLADIPGIIEGA 63
Query: 62 -EEYSAMRD--QYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKC 118
E + +++ L V +E P ++ NK
Sbjct: 64 SEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALNKV 123
Query: 119 DLSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
DL + + + + + SA T G+ L ++
Sbjct: 124 DL-LEEEAVKALADALAREGLAVLPVSALTGAGLPALKEALHALVRS 169
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 36.2 bits (82), Expect = 0.001
Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 9/164 (5%)
Query: 7 VVVGAGGVGKSALTIQLI-QNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAG--QEE 63
+VG VGKS L +L+ Q + + +G + + +E+
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEK 68
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL--S 121
+ R V V + E + + P++L NK D
Sbjct: 69 RAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQE 128
Query: 122 TWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKK 165
+ + ++ + + SA+T + VD + ++K
Sbjct: 129 KADLLPHLQFLASQMNFLDIVPISAETGLNVDT----IAAIVRK 168
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 34.6 bits (79), Expect = 0.003
Identities = 28/177 (15%), Positives = 46/177 (25%), Gaps = 36/177 (20%)
Query: 6 LVVVGAGGVGKSALTIQLIQ-------NHFVDEYDPTIEDSYRKQ--------VVIDGET 50
+ +G GK+ LT + + F + R + V
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAA 65
Query: 51 ALLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRV----KDA 106
D G +Y +G +LV A N Q + +
Sbjct: 66 RHYAHTDCPGHADYVKNMITGTAPLDGCILVVAAN--------DGPMPQTREHLLLARQI 117
Query: 107 EEVPMVLVGNKCDLSTWAVDMNQ-AQELAEQF--------NIPFIKTSAKTRMGVDD 154
+V+ NK D + + E+ E P I SA + D
Sbjct: 118 GVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEETPIIVGSALCALEQRD 174
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 33.3 bits (75), Expect = 0.012
Identities = 17/116 (14%), Positives = 35/116 (30%), Gaps = 15/116 (12%)
Query: 55 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVN---SMKSFEDIGSYREQIKRVKDAEEVPM 111
I+D G ++ + +LV + G RE I K +
Sbjct: 85 IIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQL 144
Query: 112 VLVGNKCDLSTWAVD----MNQAQELAEQF--------NIPFIKTSAKTRMGVDDA 155
++ NK DL+ D ++++ + F+ A + +
Sbjct: 145 IVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNITHK 200
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 32.3 bits (73), Expect = 0.014
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDE---YDPTIEDSYRKQVVIDGETAL-LDILDTAG 60
K+ ++GAG VG ++ + +E D + +D L +
Sbjct: 3 KVAIIGAGFVG-ASAAFTMALRQTANELVLID--VFKEKAIGEAMDINHGLPFMGQMSLY 59
Query: 61 QEEYSAMRD--QYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKD-AEEVPMVLVGNK 117
+YS ++D + T + +++ +E + + +++V N
Sbjct: 60 AGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNP 119
Query: 118 CDLSTWAV 125
D+ T+ +
Sbjct: 120 VDIITYMI 127
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 32.3 bits (73), Expect = 0.016
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 8/128 (6%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDE---YDPTIEDSYRKQVVIDGETALLD---ILDT 58
KL VGAG VG S + N VDE D + + + + + A +D +
Sbjct: 2 KLGFVGAGRVG-STSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60
Query: 59 AGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKD-AEEVPMVLVGNK 117
+ + T + ++ G ++ K++ + A E +++V N
Sbjct: 61 GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120
Query: 118 CDLSTWAV 125
D+ T+ +
Sbjct: 121 MDVMTYIM 128
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 31.2 bits (70), Expect = 0.033
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 18/133 (13%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDE---YDPTIEDSYRKQVVIDGETALLDILDT-AG 60
K+ V+GAG VG + +L + E D K + + + G
Sbjct: 2 KITVIGAGNVG-ATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPM--------V 112
+Y+ + + ++ + + VK+ + M +
Sbjct: 61 SNDYADTANSDI-----VIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115
Query: 113 LVGNKCDLSTWAV 125
+V N D+ T
Sbjct: 116 VVSNPLDIMTHVA 128
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.6 bits (70), Expect = 0.036
Identities = 22/161 (13%), Positives = 42/161 (26%), Gaps = 4/161 (2%)
Query: 7 VVVGAGGVGKSALTIQLIQNHF--VDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEY 64
+VG VGKS L L+ + T R + + +
Sbjct: 9 AIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMD 68
Query: 65 SAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWA 124
+ E V AV + + +++ V V + + A
Sbjct: 69 ALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAA 128
Query: 125 VDMNQAQELAEQ--FNIPFIKTSAKTRMGVDDAFYTLVREI 163
+A + + SA V + L+ +
Sbjct: 129 KYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALM 169
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 31.3 bits (69), Expect = 0.049
Identities = 21/162 (12%), Positives = 53/162 (32%), Gaps = 3/162 (1%)
Query: 7 VVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYSA 66
++VG VGKS L +L++ D Q ++ ++DT G +
Sbjct: 4 LIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQ 63
Query: 67 MRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWAVD 126
++ + + D + + +
Sbjct: 64 DIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENLR 123
Query: 127 MNQAQELAEQFNIPF---IKTSAKTRMGVDDAFYTLVREIKK 165
+ + E +++ F I SA+ + +D T+++++++
Sbjct: 124 EFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEE 165
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 31.1 bits (69), Expect = 0.054
Identities = 19/110 (17%), Positives = 30/110 (27%), Gaps = 3/110 (2%)
Query: 57 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGN 116
D G E +G +LV A N + ++ + +
Sbjct: 84 DAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIE 143
Query: 117 KCDLSTWAVDMNQAQELAEQF---NIPFIKTSAKTRMGVDDAFYTLVREI 163
D + Q +E E N P I SA +D + I
Sbjct: 144 LVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDFI 193
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 30.4 bits (68), Expect = 0.055
Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 6/126 (4%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDE---YDPTIEDSYRKQV-VIDGETALLDILDTAG 60
K+ +VG G VG S+ L+ F E D + + + +I G AG
Sbjct: 2 KIGIVGLGRVG-SSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG 60
Query: 61 QEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIK-RVKDAEEVPMVLVGNKCD 119
D + + +E + K A + +++V N D
Sbjct: 61 DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120
Query: 120 LSTWAV 125
+ T+
Sbjct: 121 VLTYFF 126
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 30.3 bits (68), Expect = 0.073
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEY 32
KL V+GAG VG S L Q E
Sbjct: 3 KLAVIGAGAVG-STLAFAAAQRGIAREI 29
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 30.7 bits (68), Expect = 0.089
Identities = 20/175 (11%), Positives = 60/175 (34%), Gaps = 5/175 (2%)
Query: 7 VVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY---RKQVVIDGETALLDILDTAGQEE 63
+V G G GK+ +IQ + N ++ +P + ++ + ++ + + D+ + +
Sbjct: 30 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGK 89
Query: 64 YSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTW 123
EG +V + E I ++ + + + + + S
Sbjct: 90 L--FILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVV 147
Query: 124 AVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGKEKKKRG 178
++ + +Q + T+ + A Y + + + ++ +
Sbjct: 148 RRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGER 202
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 30.0 bits (67), Expect = 0.094
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEY 32
++ K+ VVG G VG A I ++ DE
Sbjct: 17 LSRCKITVVGVGDVG-MACAISILLKGLADEL 47
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 29.6 bits (66), Expect = 0.13
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVID 47
K+ ++GAG VG S L D I + + +D
Sbjct: 3 KISIIGAGFVG-STTAHWLAAKELGDIVLLDIVEGVPQGKALD 44
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 30.1 bits (67), Expect = 0.13
Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 20 TIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYSAMRDQYMRTGEGFL 79
TI+ + + ED + DG + L++++D+ G ++S+ +R +G L
Sbjct: 67 TIKSTAISL--YSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGAL 124
Query: 80 LVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWAVDMNQAQELAEQFNI 139
+V + E + E + R E + V+V NK D + + +++ ++L + F
Sbjct: 125 VVVD-----TIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSK-EDLYQTFAR 178
Query: 140 PFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGK 172
+ D+ + + + G
Sbjct: 179 TVESVNVIVSTYADEVLGDVQVYPARGTVAFGS 211
>d1igra1 c.10.2.5 (A:1-149) Type 1 insulin-like growth factor
receptor extracellular domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 149
Score = 29.4 bits (66), Expect = 0.13
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 38 DSYRKQVVIDGETALLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDI 93
VI+G L IL + E+Y + R + +LL+F V ++S D+
Sbjct: 17 KRLENCTVIEGY---LHILLISKAEDYRSYRFPKLTVITEYLLLFRVAGLESLGDL 69
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 29.3 bits (65), Expect = 0.17
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDE 31
++VV+GAG VG ++ L+ DE
Sbjct: 8 RVVVIGAGFVG-ASYVFALMNQGIADE 33
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 29.3 bits (65), Expect = 0.17
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEY 32
K+ ++G G VG +A+ LI D+Y
Sbjct: 3 KIGIIGLGNVG-AAVAHGLIAQGVADDY 29
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 29.2 bits (64), Expect = 0.19
Identities = 25/177 (14%), Positives = 55/177 (31%), Gaps = 6/177 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-----KQVVIDGETALLDILDTA 59
++++G+G V + L + V T+E + + + D A
Sbjct: 4 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDA 63
Query: 60 GQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 119
++ + T ++ A+ K + + A + + V N+
Sbjct: 64 EVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIG 123
Query: 120 LSTWAVDMNQAQELA-EQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGKEKK 175
S A + +A + I L++E+K+ + KEK
Sbjct: 124 YSAMAKLVGVPCAVAVKFVLDGTISDRGVLAPMNSKINDPLMKELKEKYGIECKEKV 180
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 29.2 bits (65), Expect = 0.19
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYD 33
K+V+VG G VG S+ + Q +E+
Sbjct: 7 KVVLVGDGAVG-SSYAFAMAQQGIAEEFV 34
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.6 bits (65), Expect = 0.19
Identities = 17/142 (11%), Positives = 41/142 (28%), Gaps = 6/142 (4%)
Query: 7 VVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVID-GETALLDILDTAGQEEYS 65
+V GG GKS L +QL + + V+ E I
Sbjct: 33 ALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAH 92
Query: 66 AMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKD-----AEEVPMVLVGNKCDL 120
++ +G L+ + S+ + + + + + + + +
Sbjct: 93 LSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENAS 152
Query: 121 STWAVDMNQAQELAEQFNIPFI 142
A + + + +A +
Sbjct: 153 GPMAQVIGRMEAIAADTGCSIV 174
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 28.9 bits (64), Expect = 0.22
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEY 32
+ K+ VVG G VG A I ++ DE
Sbjct: 18 VPNNKITVVGVGQVG-MACAISILGKSLADEL 48
>d2g6ta1 c.147.1.1 (A:1-305) Hypothetical protein CAC2185
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 305
Score = 29.1 bits (65), Expect = 0.28
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 17/102 (16%)
Query: 45 VIDGETAL---LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFE-DIGSYREQI 100
VID D + +E YS ++++ + G + D Y + I
Sbjct: 49 VIDKTEISNYEFDYIIIFNKERYSDIKNEALELGIPERKILNGKFFFISNFDFKRYCKLI 108
Query: 101 KRVKDAEEVPMVLVGNKCDLSTWAVDMNQAQELAEQFNIPFI 142
+ P+ ++ + C W + + L +FN PFI
Sbjct: 109 EN-------PITIISDDC----WGGLV--SSYLGFKFNSPFI 137
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 28.8 bits (63), Expect = 0.33
Identities = 7/36 (19%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 6 LVVVGAG-GVGKSALTIQLIQNHFVDEYDPTIEDSY 40
+++V +G G+GKS Q
Sbjct: 37 VIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 29.0 bits (64), Expect = 0.35
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 110 PMVLVGNKCDLSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKML 169
P +++ NK D + AV + Q S + + +K +
Sbjct: 44 PRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRM 103
Query: 170 RGKEKKKRGI 179
R K K R I
Sbjct: 104 RAKGVKPRAI 113
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 28.4 bits (63), Expect = 0.35
Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 9/129 (6%)
Query: 5 KLVVVG-AGGVGKSALTIQLIQNHFVDE---YDPTIEDSYRKQVVIDGETALL---DILD 57
K+ VVG AG VG +A + DE D ++ D + +
Sbjct: 2 KVSVVGAAGTVG-AAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRV 60
Query: 58 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKD-AEEVPMVLVGN 116
G E +A D + T + ++ + + + ++ + N
Sbjct: 61 RQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120
Query: 117 KCDLSTWAV 125
DL +
Sbjct: 121 PVDLLNRHL 129
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 154
Score = 28.5 bits (63), Expect = 0.36
Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVID 47
K+ ++G+G +G + D + + +D
Sbjct: 9 KVAMIGSGMIG-GTMGYLCALRELADVVLYDVVKGMPEGKALD 50
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 28.8 bits (63), Expect = 0.39
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 5 KLVVVGAGGVGKSALTIQL 23
++ + G GG+GKS T L
Sbjct: 3 QVAIYGKGGIGKSTTTQNL 21
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 28.6 bits (63), Expect = 0.41
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 3 EYKLVVVGAGGVGKSALTIQLIQNHF--VDEYDPTIEDSYRKQVVIDGETALLDILDTAG 60
++V+G GGVGKS+ +I + + G T L+I+DT G
Sbjct: 32 SLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFT--LNIIDTPG 89
Query: 61 QEEYSAMRDQYMR---------TGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAE-EVP 110
E + D + T + L V +++ + + I
Sbjct: 90 LIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 149
Query: 111 MVLVGNKCDLST 122
++ S
Sbjct: 150 AIVALTHAQFSP 161
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 28.7 bits (63), Expect = 0.45
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 5 KLVVVGAGGVGKSALTIQL 23
+ + G GG+GKS T L
Sbjct: 4 QCAIYGKGGIGKSTTTQNL 22
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 28.4 bits (62), Expect = 0.48
Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNH----FVDEYDPTIEDSYRKQVVI 46
K+ + GA G G + + F+D++ +S +
Sbjct: 4 KIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDF 49
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 28.4 bits (62), Expect = 0.51
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 6 LVVVGAGGVGKSALTIQL 23
L G GGVGK++++
Sbjct: 11 LFFTGKGGVGKTSISCAT 28
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 27.4 bits (60), Expect = 0.67
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNHFVD 30
K+V+VG+G +G + ++Q + D
Sbjct: 5 KIVLVGSGMIG-GVMATLIVQKNLGD 29
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 27.9 bits (61), Expect = 0.67
Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 17/118 (14%)
Query: 54 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS---MKSFEDIGSYREQIKRVKDAEEVP 110
+LD G + Y + +LV + FE G RE +
Sbjct: 105 SLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINH 164
Query: 111 MVLVGNKCDLSTWAVDMNQAQELA--------------EQFNIPFIKTSAKTRMGVDD 154
+V+V NK D + + +E + ++ ++ SA T V D
Sbjct: 165 LVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKD 222
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 27.6 bits (61), Expect = 0.71
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHF 28
+++ G GVGKS ++L+Q
Sbjct: 17 VLITGDSGVGKSETALELVQRGH 39
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 27.9 bits (61), Expect = 0.72
Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 16/111 (14%)
Query: 55 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLV 114
I DT G E+Y+ T + A+ + + + + + + + ++V
Sbjct: 93 IADTPGHEQYTRNMATGASTCDL-----AIILVDARYGVQTQTRRHSYIASLLGIKHIVV 147
Query: 115 GNKCDLSTWAVDMNQAQELAEQF-----------NIPFIKTSAKTRMGVDD 154
+ A+ + F+ SA V +
Sbjct: 148 AINKMDLNGFDERVFESIKADYLKFAEGIAFKPTTMAFVPMSALKGDNVVN 198
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 27.2 bits (60), Expect = 0.86
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHF 28
+++ G G+GKS ++LI+
Sbjct: 18 VLITGDSGIGKSETALELIKRGH 40
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 27.6 bits (60), Expect = 1.0
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 6 LVVVGAGGVGKSALTIQL 23
++++G GGVGK+ + +
Sbjct: 23 IMLMGKGGVGKTTMAAAI 40
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 27.3 bits (59), Expect = 1.0
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 92 DIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWAVDMNQAQELAEQF--NIPFIKTSAKTR 149
D+ S E+ + K E++ + K D S + + + + + + SAKTR
Sbjct: 168 DLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTR 227
Query: 150 MGVDDAFYTLVREI 163
G +D TL E
Sbjct: 228 EGFED-LETLAYEH 240
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 27.2 bits (60), Expect = 1.0
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHF 28
+++ G G+GKS + LI +
Sbjct: 18 VLLTGRSGIGKSECALDLINKNH 40
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 27.4 bits (59), Expect = 1.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQL 23
M +V G GG GK+ +T L
Sbjct: 1 MGRIISIVSGKGGTGKTTVTANL 23
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 27.2 bits (59), Expect = 1.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 1 MAEYKLVVVGAGGVGKSA 18
+A Y +V+G G G ++
Sbjct: 1 VASYDYLVIGGGSGGLAS 18
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 26.7 bits (58), Expect = 1.2
Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 10/131 (7%)
Query: 5 KLVVVGA-GGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEE 63
K+ ++GA G VG + + + D E S K + + +
Sbjct: 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61
Query: 64 YSAMRDQYMRTGEGFLLVFAVN-----SMKSFE----DIGSYREQIKRVKDAEEVPMVLV 114
Y + E +++ M + + + K++ + + + ++
Sbjct: 62 YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121
Query: 115 GNKCDLSTWAV 125
N D+ T+
Sbjct: 122 TNPVDVMTYKA 132
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 26.9 bits (58), Expect = 1.6
Identities = 6/36 (16%), Positives = 12/36 (33%)
Query: 129 QAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIK 164
Q ++L + ++ + R A IK
Sbjct: 24 QCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIK 59
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 26.6 bits (57), Expect = 1.8
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 110 PMVLVGNKCDLSTWAVDMNQAQELAEQFNIPFIKTSAKTRMGVDD 154
G + T + + Q N I SAKT GVD+
Sbjct: 120 KSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDE 164
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 26.7 bits (58), Expect = 1.8
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHFV 29
L + G G GKS + Q +
Sbjct: 47 LFLHGRAGSGKSVIASQALSKSDQ 70
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.4 bits (57), Expect = 1.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 6 LVVVGAGGVGKSALTIQLIQNH 27
LV++GA GVG+ + LI H
Sbjct: 6 LVLLGAHGVGRRHIKNTLITKH 27
>d1iq4a_ d.77.1.1 (A:) Ribosomal protein L5 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 179
Score = 26.4 bits (58), Expect = 1.9
Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 57 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGN 116
T E D+ + F S KSF+ G+Y IK E+ V
Sbjct: 89 VTLRGERMYEFLDKLISVSLPRARDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVNK 148
Query: 117 K--CDLS--TWAVDMNQAQELAEQFNIPFIK 143
D+ T A +A+EL +PF K
Sbjct: 149 VRGMDIVIVTTANTDEEARELLALLGMPFQK 179
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 26.5 bits (57), Expect = 2.0
Identities = 11/64 (17%), Positives = 17/64 (26%), Gaps = 1/64 (1%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYS 65
L++ G G GKS + L V + D + L +
Sbjct: 7 LLLSGHPGSGKSTIAEALANLPGVPKVH-FHSDDLWGYIKHGRIDPWLPQSHQQNRMIMQ 65
Query: 66 AMRD 69
D
Sbjct: 66 IAAD 69
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 26.6 bits (58), Expect = 2.0
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 55 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLV 114
I+D G +++ ++ MR +G A+ S + + E + R + +VP +
Sbjct: 75 IIDAPGHVDFTIEVERSMRVLDG-----AIVVFDSSQGVEPQSETVWRQAEKYKVPRIAF 129
Query: 115 GNKCD 119
NK D
Sbjct: 130 ANKMD 134
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.0 bits (56), Expect = 2.5
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQ 43
+V G GKS+L L++ + + ++ + R+
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP 42
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 26.2 bits (58), Expect = 2.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 5 KLVVVGAGGVGKSALTIQLIQN 26
K+ + G GVGK+ L ++LI N
Sbjct: 70 KIGLFGGAGVGKTVLIMELINN 91
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 26.3 bits (56), Expect = 2.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 7 VVVGAGGVGKSALTIQL 23
V G GG GK+ +T L
Sbjct: 6 VASGKGGTGKTTITANL 22
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 25.7 bits (55), Expect = 3.2
Identities = 9/45 (20%), Positives = 17/45 (37%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGET 50
+V+ G VGKS + L + + + + +DG
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVD 49
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 25.4 bits (55), Expect = 3.4
Identities = 7/29 (24%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEY 32
K+ ++G+G +G + I++++N E
Sbjct: 5 LKVAIIGSGNIGTDLM-IKVLRNAKYLEM 32
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 26.0 bits (56), Expect = 3.5
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 8 VVGAGGVGKSALTIQLIQNHFVDEYDPTI 36
+ G GVGKS L + +
Sbjct: 56 ITGVPGVGKSTTIDALGSLLTAAGHKVAV 84
>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 308
Score = 25.6 bits (56), Expect = 3.7
Identities = 11/74 (14%), Positives = 20/74 (27%)
Query: 68 RDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWAVDM 127
+ SY + ++R V L G + D + AV
Sbjct: 78 LSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPE 137
Query: 128 NQAQELAEQFNIPF 141
+EL ++
Sbjct: 138 GLREELLSIIDVIA 151
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 25.7 bits (55), Expect = 3.7
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYS 65
+V+ G G GKS L +L + S + GE D + E S
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEY---PDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKS 60
Query: 66 AMRDQYM 72
+++
Sbjct: 61 MIKNNEF 67
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 25.9 bits (55), Expect = 3.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 3 EYKLVVVGAGGVGKSA 18
Y+ VV+G G +G +
Sbjct: 4 HYEAVVIGGGIIGSAI 19
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 25.6 bits (55), Expect = 3.8
Identities = 7/33 (21%), Positives = 10/33 (30%)
Query: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI 36
+L V G G GKS + +
Sbjct: 55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAV 87
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 25.4 bits (55), Expect = 4.0
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 5 KLVVVGAGGVGKSALTIQLIQN 26
++ V+G G L L+
Sbjct: 2 RIAVIGGGSSYTPELVKGLLDI 23
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 25.4 bits (54), Expect = 4.4
Identities = 13/108 (12%), Positives = 31/108 (28%), Gaps = 8/108 (7%)
Query: 55 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLV 114
I+D + + V A N + + + +++ V
Sbjct: 100 IVDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGWRVHEGRPFMETFSKQDIQVQQ 159
Query: 115 GNKCDLSTWAVDMNQAQELAEQF--------NIPFIKTSAKTRMGVDD 154
+ +++ +E+F + I SA T G+ +
Sbjct: 160 KLDTKVYELVGKLHEEGFESERFDRVTDFASQVSIIPISAITGEGIPE 207
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 25.3 bits (55), Expect = 4.5
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 55 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLV 114
+D G +Y +G +LV + + RE I + +V+
Sbjct: 71 HVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQT----REHILLARQVGVPYIVVF 126
Query: 115 GNKCDLSTWAVDMNQAQELAEQ 136
NK D+ VD + +L E
Sbjct: 127 MNKVDM----VDDPELLDLVEM 144
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 25.0 bits (54), Expect = 4.8
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 5 KLVVVGAGGVGKSALTIQLIQNH 27
K+ +G G L LI+ +
Sbjct: 3 KIATIGGGSSYTPELVEGLIKRY 25
>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 25.0 bits (53), Expect = 5.0
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 2 AEYKLVVVGAGGVGKSALTI 21
++ ++ G+G GK L +
Sbjct: 131 EAHENIIHGSGATGKMILLL 150
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 24.9 bits (53), Expect = 5.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 6 LVVVGAGGVGKSALTIQLIQNH 27
+V+ G G GKS L +L Q H
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEH 24
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 24.9 bits (53), Expect = 6.4
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 3/115 (2%)
Query: 5 KLVVVGAGGVGKSALTIQLIQN---HFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQ 61
+++ G GVGK+ L +L +++ D E+ + + +LD +
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDE 65
Query: 62 EEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGN 116
+ + G F +R++ L N
Sbjct: 66 LDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDN 120
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 202
Score = 25.0 bits (53), Expect = 6.6
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 11/86 (12%)
Query: 60 GQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 119
G + +G+ + F V + F + +KD + PM ++G
Sbjct: 128 GTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTA------IKDYDFPPMTVIGELDK 181
Query: 120 LSTWAVDMNQAQELAEQFNIPFIKTS 145
+ + +E+ + + P I+ +
Sbjct: 182 QTG-----DLLEEIYRELDAPIIRKT 202
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 258
Score = 25.0 bits (53), Expect = 7.3
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 89 SFEDIGSYREQIKRVKDAEEVPM 111
++D+G R+Q+ ++K+ E+P+
Sbjct: 2 GYDDVGGCRKQLAQIKEMVELPL 24
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 24.5 bits (52), Expect = 7.9
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 129 QAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGK 172
QA+++ + IP I T R T + K M RG
Sbjct: 16 QAEKIVAAYGIPHISTGDMFRA--AMKEGTPLGLQAKQYMDRGD 57
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 24.6 bits (52), Expect = 8.0
Identities = 17/185 (9%), Positives = 56/185 (30%), Gaps = 3/185 (1%)
Query: 5 KLVVV-GAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVI-DGETALLDILDTAGQE 62
+ + + G VGKS ++L+ + + + T + + + + A +
Sbjct: 3 RRLSIEGNIAVGKSTF-VKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLD 61
Query: 63 EYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLST 122
++ T + F + + + + V +L
Sbjct: 62 MMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFE 121
Query: 123 WAVDMNQAQELAEQFNIPFIKTSAKTRMGVDDAFYTLVREIKKDKMLRGKEKKKRGISGN 182
+ + + ++ + A + ++ ++ + ++++GI
Sbjct: 122 NGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELA 181
Query: 183 KLKQC 187
L+Q
Sbjct: 182 YLEQL 186
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 24.6 bits (53), Expect = 8.5
Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 9/146 (6%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI--EDSYRKQVVIDGETALLDILDT 58
M ++ + GA G+GK+ + +HF + + + + GE A+ I T
Sbjct: 3 MGVLRIYLDGAYGIGKTTA-AEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGT 61
Query: 59 AGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNK- 117
Q + F + + + ++ V + K
Sbjct: 62 --QTRRLNGDVSP-EDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKI 118
Query: 118 --CDLSTWAVDMNQAQELAEQFNIPF 141
D A + ++
Sbjct: 119 MLSDRHPIASTICFPLSRYLVGDMSP 144
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 24.7 bits (52), Expect = 8.7
Identities = 20/125 (16%), Positives = 41/125 (32%)
Query: 7 VVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLDILDTAGQEEYSA 66
G G GK+ + Q N E+ E++ K V + +D T E
Sbjct: 38 EFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIMQ 97
Query: 67 MRDQYMRTGEGFLLVFAVNSMKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLSTWAVD 126
M + G+ L V + + + E+I+ + ++V + +
Sbjct: 98 MAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEY 157
Query: 127 MNQAQ 131
+ +
Sbjct: 158 TGRGK 162
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 24.5 bits (52), Expect = 8.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 2 AEYKLVVVGAGGVGKSA 18
AEY +VV+G G G SA
Sbjct: 5 AEYDVVVLGGGPGGYSA 21
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 24.6 bits (52), Expect = 9.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 3 EYKLVVVGAGGVGKSA 18
Y ++V+G G G A
Sbjct: 2 HYDVIVIGGGPSGLMA 17
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 24.3 bits (52), Expect = 9.1
Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 3/95 (3%)
Query: 1 MAEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETALLD---ILD 57
+ V G GVGKS+L + + + + K E + D
Sbjct: 95 FQDKTTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGLVAD 154
Query: 58 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSMKSFED 92
T G + G F + +S F
Sbjct: 155 TPGFSSLEFTDIEEEELGYTFPDIREKSSSCKFRG 189
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.378
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 703,829
Number of extensions: 32086
Number of successful extensions: 464
Number of sequences better than 10.0: 1
Number of HSP's gapped: 385
Number of HSP's successfully gapped: 172
Length of query: 191
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 111
Effective length of database: 1,309,196
Effective search space: 145320756
Effective search space used: 145320756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.7 bits)