BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11137
(831 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZLM0|CDC73_CHICK Parafibromin OS=Gallus gallus GN=CDC73 PE=2 SV=1
Length = 531
Score = 342 bits (877), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 193/342 (56%), Positives = 241/342 (70%), Gaps = 32/342 (9%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVIWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+LAYLNGE +TS+SID++APLEI TQVKR +E+ AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLAYLNGETSTSSSIDRSAPLEIGLQRSTQVKR-AADEILAEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAIKAKRLAKKRTTI 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVEKIAAIKAK +AKKR+TI
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 KRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
K TD+ D D + + +VDVT++I+SRER WRTRT+I ++GK F+KN
Sbjct: 198 K--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFAKN 248
Query: 362 IFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR RPAP T T NK P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNTAPTDPTLRNKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRKPALTPSTPAHQTPSATP 460
FKIDTMGTYHGMTLKSVTEG + RK QTP+A P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARK---------TQTPAAQP 339
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 230/328 (70%), Gaps = 23/328 (7%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YN KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNTQKKEIVVKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+LAYLNGE +TS+SID++APLEI TQVKR +
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLAYLNGETSTSSSIDRSAPLEIGLQRSTQVKR-AAD 129
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAI 646
E+ AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVEKIAAI
Sbjct: 130 EILAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 KAKRLAKKRTTIKRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
KAK +AKKR+TIK TD+ D D + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIK--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQ 763
I ++GK F+KNIFAILQS+KAREEGR RPAP T T NK P P YNRYDQ
Sbjct: 237 ILQSTGKNFAKNIFAILQSVKAREEGRAPEQRPAPNTAPTDPTLRNKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIST 791
ERF K +EETEGFKIDTMG H + +
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKS 322
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 85/128 (66%), Gaps = 22/128 (17%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSKGD----GTTV----PYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPW---DA 103
IQR K GTTV PYRV+D PLKL DWDRVVAVFV GPAWQFKGWPW D
Sbjct: 405 IQRRKDQMQPGGTTVSVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDG 464
Query: 104 NPVEIFSK 111
+PV+IF+K
Sbjct: 465 SPVDIFAK 472
>sp|Q8JZM7|CDC73_MOUSE Parafibromin OS=Mus musculus GN=Cdc73 PE=2 SV=1
Length = 531
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 238/342 (69%), Gaps = 32/342 (9%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAIKAKRLAKKRTTI 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVEKIAAIKAK +AKKR+TI
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 KRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
K TD+ D D + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 K--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR RPAP V T K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRKPALTPSTPAHQTPSATP 460
FKIDTMGTYHGMTLKSVTEG + RK QTP+A P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARK---------TQTPAAQP 339
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 228/328 (69%), Gaps = 23/328 (7%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAI 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVEKIAAI
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 KAKRLAKKRTTIKRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
KAK +AKKR+TIK TD+ D D + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIK--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR RPAP V T K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIST 791
ERF K +EETEGFKIDTMG H + +
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKS 322
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 85/128 (66%), Gaps = 22/128 (17%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPW---DA 103
IQR K GT TVPYRV+D PLKL DWDRVVAVFV GPAWQFKGWPW D
Sbjct: 405 IQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDG 464
Query: 104 NPVEIFSK 111
+PV+IF+K
Sbjct: 465 SPVDIFAK 472
>sp|Q6P1J9|CDC73_HUMAN Parafibromin OS=Homo sapiens GN=CDC73 PE=1 SV=1
Length = 531
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 238/342 (69%), Gaps = 32/342 (9%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAIKAKRLAKKRTTI 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVEKIAAIKAK +AKKR+TI
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 KRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
K TD+ D D + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 K--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR RPAP V T K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRKPALTPSTPAHQTPSATP 460
FKIDTMGTYHGMTLKSVTEG + RK QTP+A P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARK---------TQTPAAQP 339
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 228/328 (69%), Gaps = 23/328 (7%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAI 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVEKIAAI
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 KAKRLAKKRTTIKRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
KAK +AKKR+TIK TD+ D D + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIK--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR RPAP V T K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIST 791
ERF K +EETEGFKIDTMG H + +
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKS 322
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 85/128 (66%), Gaps = 22/128 (17%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPW---DA 103
IQR K GT TVPYRV+D PLKL DWDRVVAVFV GPAWQFKGWPW D
Sbjct: 405 IQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDG 464
Query: 104 NPVEIFSK 111
+PV+IF+K
Sbjct: 465 SPVDIFAK 472
>sp|Q4V8C8|CDC73_RAT Parafibromin OS=Rattus norvegicus GN=Cdc73 PE=2 SV=1
Length = 531
Score = 338 bits (867), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/342 (56%), Positives = 237/342 (69%), Gaps = 32/342 (9%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAIKAKRLAKKRTTI 301
D ++ K++LAARL+ KE V + I+ SL+EAM VEKIAAIKAK +AKKR+TI
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMLVEKIAAIKAKIMAKKRSTI 197
Query: 302 KRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
K TD+ D D + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 K--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR RPAP V T K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRKPALTPSTPAHQTPSATP 460
FKIDTMGTYHGMTLKSVTEG + RK QTP+A P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARK---------TQTPAAQP 339
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 227/328 (69%), Gaps = 23/328 (7%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAI 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAM VEKIAAI
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMLVEKIAAI 185
Query: 647 KAKRLAKKRTTIKRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
KAK +AKKR+TIK TD+ D D + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIK--------TDLDD-DITALKQRSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRPAPPTPLVPSTPVNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR RPAP V T K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIST 791
ERF K +EETEGFKIDTMG H + +
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKS 322
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 85/128 (66%), Gaps = 22/128 (17%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPW---DA 103
IQR K GT TVPYRV+D PLKL DWDRVVAVFV GPAWQFKGWPW D
Sbjct: 405 IQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDG 464
Query: 104 NPVEIFSK 111
+PV+IF+K
Sbjct: 465 SPVDIFAK 472
>sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3
Length = 1463
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 786 MFVISTQSVSTEPQCPFRCICFRTTVRCMFQHLEYVPRVSNDTTIL 831
+F+++ + P CP RC+CF++TVRCM L+++P+V TT+L
Sbjct: 11 LFLLAGWCLPGLP-CPSRCLCFKSTVRCMHLMLDHIPQVPQQTTVL 55
>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1
Length = 1457
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 23/32 (71%)
Query: 800 CPFRCICFRTTVRCMFQHLEYVPRVSNDTTIL 831
CP RC+CFRTTVRCM LE VP V TTIL
Sbjct: 26 CPSRCLCFRTTVRCMHLMLESVPAVPPHTTIL 57
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2
Length = 1475
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 800 CPFRCICFRTTVRCMFQHLEYVPRVSNDTTIL 831
CP RC+CFRTTVRCM LE VP V+ T+IL
Sbjct: 33 CPSRCLCFRTTVRCMHLLLEAVPAVAPQTSIL 64
>sp|Q92626|PXDN_HUMAN Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2
Length = 1479
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 800 CPFRCICFRTTVRCMFQHLEYVPRVSNDTTIL 831
CP RC+CFRTTVRCM LE VP V+ T+IL
Sbjct: 36 CPSRCLCFRTTVRCMHLLLEAVPAVAPQTSIL 67
>sp|Q06697|CDC73_YEAST Cell division control protein 73 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC73 PE=1 SV=1
Length = 393
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 25/131 (19%)
Query: 2 TRLPSGAPSPSHQKRISRT----------PIIIIPAANTSLITMF----VTTEAK----R 43
++LP G RIS+T PII+IP+A +S++T+ E+K R
Sbjct: 211 SKLPPGHKGA--HGRISKTNGSSGGPRKDPIILIPSAASSILTVANIKQFLLESKYVNPR 268
Query: 44 AAGSKRENEILIQRSKGDGTTVPYR--VIDNPLKLARTD-WDRVVAVFVMGPAWQFKGWP 100
S + I+++ + + P R ++DN + + WDRVVA+F G WQF +
Sbjct: 269 NLPSVPNGLVNIEKN-FERISRPIRFIIVDNTRMFTKPEYWDRVVAIFTTGHTWQFNNYQ 327
Query: 101 WDANPVEIFSK 111
W++ P E+F +
Sbjct: 328 WNS-PQELFQR 337
>sp|Q9UUE7|CDC73_SCHPO Cell division control protein 73 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cdc73 PE=3 SV=1
Length = 371
Score = 39.7 bits (91), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 64 TVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPWDANPVEIF 109
T+ + +++ K WDRVV VF G AWQF+ + W + P ++F
Sbjct: 264 TMRFIIVEGTEKFKPDYWDRVVCVFTTGQAWQFRDYKW-SEPHQLF 308
>sp|P28675|PGS2_CHICK Decorin OS=Gallus gallus GN=DCN PE=1 SV=1
Length = 357
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
P CPFRC C V+C LE VP+ + DTT+L
Sbjct: 50 PVCPFRCQCHLRVVQCSDLGLERVPKDLPPDTTLL 84
>sp|Q9DE68|PGS2_COTJA Decorin OS=Coturnix coturnix japonica GN=DCN PE=2 SV=1
Length = 356
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
P CPFRC C V+C LE VP+ + DTT+L
Sbjct: 49 PVCPFRCQCHLRVVQCSDLGLERVPKDLPPDTTLL 83
>sp|B3QP55|NUOD_CHLP8 NADH-quinone oxidoreductase subunit D OS=Chlorobaculum parvum
(strain NCIB 8327) GN=nuoD PE=3 SV=1
Length = 400
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 170 IGLNHTAYVRKAAASNIP-VVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVK--RV 226
+G H + + + P +VP R D LA +N E+A +++K +EIP +V+ RV
Sbjct: 66 LGYLHRCFEKHCENVDYPGIVPYTDRMDYLAGMNSELAYCLTVEKLLDIEIPRRVEFIRV 125
Query: 227 GTEEL 231
T EL
Sbjct: 126 ITSEL 130
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 527 IGLNHTAYVRKAAASNIP-VVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVK--RV 583
+G H + + + P +VP R D LA +N E+A +++K +EIP +V+ RV
Sbjct: 66 LGYLHRCFEKHCENVDYPGIVPYTDRMDYLAGMNSELAYCLTVEKLLDIEIPRRVEFIRV 125
Query: 584 GTEEL 588
T EL
Sbjct: 126 ITSEL 130
>sp|Q5R1V9|PGS2_PANTR Decorin OS=Pan troglodytes GN=DCN PE=2 SV=1
Length = 359
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 795 STEPQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
S P CPFRC C V+C L+ VP+ + DTT+L
Sbjct: 49 SLGPVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLL 86
>sp|P07585|PGS2_HUMAN Decorin OS=Homo sapiens GN=DCN PE=1 SV=1
Length = 359
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 795 STEPQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
S P CPFRC C V+C L+ VP+ + DTT+L
Sbjct: 49 SLGPVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLL 86
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR 823
PQCP C C T VRC +HL+ +P+
Sbjct: 732 PQCPQECACLDTVVRCSNKHLQALPK 757
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR 823
PQCP C C T VRC +HL+ +P+
Sbjct: 732 PQCPQECACLDTVVRCSNKHLQALPK 757
>sp|Q5UPX5|YL237_MIMIV Uncharacterized protein L237 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L237 PE=4 SV=1
Length = 289
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 671 GDKDAEKDNLKDMLAFDV-DVTKNIISRERQWRTRTSIFHTSGKIFSKNIFAILQSIKAR 729
D D KD L+D + + D ++NI+ R+ + ++ K F +N+ S+ +
Sbjct: 142 NDTDIPKDPLRDRMRESLRDSSRNIL--------RSGVLNSRKKDFEENLHPSFNSLDSL 193
Query: 730 EEGRHRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEGFKIDTMGKG 784
G P P + + S N P+ IVYN F +++E +DT+
Sbjct: 194 NHGHRNPIPISNPISSKTSNTQFPKKIVYN---PNIFDNLSDDSEEIDLDTVSDS 245
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 314 GDKDAEKDNLKDMLAFDV-DVTKNIISRERQWRTRTSIFHTSGKIFSKNIFAILQSIKAR 372
D D KD L+D + + D ++NI+ R+ + ++ K F +N+ S+ +
Sbjct: 142 NDTDIPKDPLRDRMRESLRDSSRNIL--------RSGVLNSRKKDFEENLHPSFNSLDSL 193
Query: 373 EEGRHRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEGFKIDTMG 425
G P P + + S N P+ IVYN F +++E +DT+
Sbjct: 194 NHGHRNPIPISNPISSKTSNTQFPKKIVYN---PNIFDNLSDDSEEIDLDTVS 243
>sp|Q28888|PGS2_RABIT Decorin OS=Oryctolagus cuniculus GN=DCN PE=2 SV=1
Length = 360
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
P CPFRC C V+C L+ VP+ + DTT+L
Sbjct: 53 PVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLL 87
>sp|A4SF45|NUOD_PROVI NADH-quinone oxidoreductase subunit D OS=Prosthecochloris
vibrioformis (strain DSM 265) GN=nuoD PE=3 SV=1
Length = 400
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 170 IGLNHTAYVRKAAASNIP-VVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVK--RV 226
+G H + + + P +VP R D LA +N E+A +++K LEIP +V+ RV
Sbjct: 66 LGYLHRCFEKHCEHVDYPAIVPYTDRMDYLAGINSEMAYCVAVEKLLDLEIPRRVEFIRV 125
Query: 227 GTEEL 231
EL
Sbjct: 126 IVSEL 130
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 527 IGLNHTAYVRKAAASNIP-VVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVK--RV 583
+G H + + + P +VP R D LA +N E+A +++K LEIP +V+ RV
Sbjct: 66 LGYLHRCFEKHCEHVDYPAIVPYTDRMDYLAGINSEMAYCVAVEKLLDLEIPRRVEFIRV 125
Query: 584 GTEEL 588
EL
Sbjct: 126 IVSEL 130
>sp|O46542|PGS2_HORSE Decorin OS=Equus caballus GN=DCN PE=2 SV=1
Length = 360
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
P CPFRC C V+C L+ VP+ + DTT+L
Sbjct: 53 PVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLL 87
>sp|Q29393|PGS2_CANFA Decorin OS=Canis familiaris GN=DCN PE=2 SV=2
Length = 360
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR-VSNDTTIL 831
P CPFRC C V+C L+ VP+ + DTT+L
Sbjct: 53 PVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLL 87
>sp|P21810|PGS1_HUMAN Biglycan OS=Homo sapiens GN=BGN PE=1 SV=2
Length = 368
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 762 DQERFIKSREETEGFKIDTMGKGHMFVISTQSVS--TEPQCPFRCICFRTTVRCMFQHLE 819
D F+ + EE G DT G V+ SV+ CPF C C V+C L+
Sbjct: 30 DDGPFMMNDEEASG--ADTSG-----VLDPDSVTPTYSAMCPFGCHCHLRVVQCSDLGLK 82
Query: 820 YVPR-VSNDTTIL 831
VP+ +S DTT+L
Sbjct: 83 SVPKEISPDTTLL 95
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 800 CPFRCICFRTTVRCMFQHLEYVPRVSNDTTIL 831
CP C C TVRC+ L VP++ DT L
Sbjct: 26 CPAGCTCLERTVRCIRAKLSAVPKLPQDTQTL 57
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 798 PQCPFRCICFRTTVRCMFQHLEYVPR 823
PQCP C C T VRC +HL +P+
Sbjct: 732 PQCPQECACLDTVVRCSNKHLRALPK 757
>sp|Q9FH80|BAM8_ARATH Beta-amylase 8 OS=Arabidopsis thaliana GN=BAM8 PE=2 SV=1
Length = 689
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 8/121 (6%)
Query: 184 SNIPVVPRPYRKDILAYLNGEVATSASIDKTA--PLEIPTQVKRVGTEELETPAKKPRLE 241
N P+ R D++A L E S D T + P V + T +E+P L+
Sbjct: 118 GNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQPNHVVQFPTRSIESPLSSSTLK 177
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKF------GPGSLTEAMSVEKIAAIKAKRLA 295
+ QQ + + K A V+LD+I G G T + + ++A +L
Sbjct: 178 NCAKAAIESQQHSVLRNDEKLAPVSLDSIGIAESDHPGNGRYTSVSPITSVGCLEANQLI 237
Query: 296 K 296
+
Sbjct: 238 Q 238
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 8/121 (6%)
Query: 541 SNIPVVPRPYRKDILAYLNGEVATSASIDKTA--PLEIPTQVKRVGTEELETPAKKPRLE 598
N P+ R D++A L E S D T + P V + T +E+P L+
Sbjct: 118 GNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQPNHVVQFPTRSIESPLSSSTLK 177
Query: 599 DSVHLQHVKQQLAARLDAPKEASVTLDNIKF------GPGSLTEAMSVEKIAAIKAKRLA 652
+ QQ + + K A V+LD+I G G T + + ++A +L
Sbjct: 178 NCAKAAIESQQHSVLRNDEKLAPVSLDSIGIAESDHPGNGRYTSVSPITSVGCLEANQLI 237
Query: 653 K 653
+
Sbjct: 238 Q 238
>sp|Q3ASW5|NUOD_CHLCH NADH-quinone oxidoreductase subunit D OS=Chlorobium chlorochromatii
(strain CaD3) GN=nuoD PE=3 SV=1
Length = 400
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 170 IGLNHTAYVRKAAASNIP-VVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVK--RV 226
+G H + + A + P VVP R D LA +N E A + +++K +EIP +V+ R+
Sbjct: 66 LGYLHRCFEKTAENVDYPAVVPFTDRLDYLAAMNSEFAYALTVEKLLDIEIPRRVEFIRI 125
Query: 227 GTEEL 231
EL
Sbjct: 126 LVAEL 130
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 527 IGLNHTAYVRKAAASNIP-VVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVK--RV 583
+G H + + A + P VVP R D LA +N E A + +++K +EIP +V+ R+
Sbjct: 66 LGYLHRCFEKTAENVDYPAVVPFTDRLDYLAAMNSEFAYALTVEKLLDIEIPRRVEFIRI 125
Query: 584 GTEEL 588
EL
Sbjct: 126 LVAEL 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 309,350,261
Number of Sequences: 539616
Number of extensions: 13592215
Number of successful extensions: 48754
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 48585
Number of HSP's gapped (non-prelim): 154
length of query: 831
length of database: 191,569,459
effective HSP length: 126
effective length of query: 705
effective length of database: 123,577,843
effective search space: 87122379315
effective search space used: 87122379315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)