Your job contains 1 sequence.
>psy11137
NTRLPSGAPSPSHQKRISRTPIIIIPAANTSLITMFVTTEAKRAAGSKRENEILIQRSKG
DGTTVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPWDANPVEIFSKNLAVSRNFI
QTTSCNQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRK
AAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVKRVGTEELETPAKKPRL
EDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAIKAKRLAKKRTT
IKRVATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSK
NIFAILQSIKAREEGRHRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEGFK
IDTMGTYHGMTLKSVTEGNTPRKPALTPSTPAHQTPSATPNANAAASPAPYNINKKEIIE
RENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAA
SNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVKRVGTEELETPAKKPRLEDS
VHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEKIAAIKAKRLAKKRTTIKR
VATDTDGTDIGDKDAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKNIF
AILQSIKAREEGRHRPAPPTPLVPSTPVNKSVPQPIVYNRYDQERFIKSREETEGFKIDT
MGKGHMFVISTQSVSTEPQCPFRCICFRTTVRCMFQHLEYVPRVSNDTTIL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11137
(831 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037657 - symbol:hyx "hyrax" species:7227 "Drosoph... 805 4.5e-82 2
ZFIN|ZDB-GENE-040426-1309 - symbol:cdc73 "cell division c... 758 3.5e-75 1
UNIPROTKB|Q5ZLM0 - symbol:CDC73 "Parafibromin" species:90... 741 2.2e-73 1
UNIPROTKB|E1BPQ8 - symbol:CDC73 "Uncharacterized protein"... 736 7.5e-73 1
UNIPROTKB|A2SXS7 - symbol:HRPT2 "Uncharacterized protein"... 736 7.5e-73 1
UNIPROTKB|Q6P1J9 - symbol:CDC73 "Parafibromin" species:96... 736 7.5e-73 1
MGI|MGI:2384876 - symbol:Cdc73 "cell division cycle 73, P... 736 7.5e-73 1
RGD|1311766 - symbol:Cdc73 "cell division cycle 73" speci... 730 3.2e-72 1
WB|WBGene00018064 - symbol:F35F11.1 species:6239 "Caenorh... 251 3.8e-18 1
TAIR|locus:2077076 - symbol:PHP "PLANT HOMOLOGOUS TO PARA... 151 2.4e-07 1
POMBASE|SPBC17G9.02c - symbol:SPBC17G9.02c "RNA polymeras... 130 4.0e-05 1
>FB|FBgn0037657 [details] [associations]
symbol:hyx "hyrax" species:7227 "Drosophila melanogaster"
[GO:0016055 "Wnt receptor signaling pathway" evidence=IMP]
[GO:0008587 "imaginal disc-derived wing margin morphogenesis"
evidence=IMP] [GO:0008586 "imaginal disc-derived wing vein
morphogenesis" evidence=IMP] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IGI;IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] EMBL:AE014297
GO:GO:0045893 GO:GO:0016055 GO:GO:0008586 GO:GO:0007480
GO:GO:0008407 GO:GO:0008587 eggNOG:COG5157
GeneTree:ENSGT00390000001114 KO:K15175 OMA:EYYTLEC GO:GO:0016593
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 GO:GO:0045880
GO:GO:0001745 EMBL:AY061525 EMBL:DQ305403 RefSeq:NP_001163564.1
RefSeq:NP_649863.1 UniGene:Dm.3569 SMR:Q9VHI1 IntAct:Q9VHI1
MINT:MINT-937582 STRING:Q9VHI1 EnsemblMetazoa:FBtr0081968
EnsemblMetazoa:FBtr0300415 GeneID:41086 KEGG:dme:Dmel_CG11990
UCSC:CG11990-RA CTD:41086 FlyBase:FBgn0037657 InParanoid:Q9VHI1
OrthoDB:EOG48CZ9J GenomeRNAi:41086 NextBio:822091 Uniprot:Q9VHI1
Length = 538
Score = 805 (288.4 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 180/355 (50%), Positives = 228/355 (64%)
Query: 103 ANPVEIFSKNLAVSRNFIQTTSCNQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLEC 162
A+P+ + + + ++ S QIIFGEFSWPK V TNYL Y S ++GA ++YYTLEC
Sbjct: 2 ADPLSLLRQYNINKKEIVERDS--QIIFGEFSWPKSVKTNYLKYGSGKKGAPREYYTLEC 59
Query: 163 LLFFLKNIGLNHTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQ 222
LL+ LKN+ L H+ YVR+ AA +IP V RP RK++LAYLNGE T ASIDK+APLEIPTQ
Sbjct: 60 LLYLLKNVMLQHSVYVRQCAAEDIPAVNRPDRKELLAYLNGETPTCASIDKSAPLEIPTQ 119
Query: 223 VKRVGTEE---LETPAKKPRLEDSVHLQHVKQQLAARLDA-PKEASVTLDNIKFGPGSLT 278
VKR E +E AKK R E++ +Q V++QLAAR D KE +V +DNIK SL+
Sbjct: 120 VKRAAEGEPSSVEVAAKKARFEET-QVQKVREQLAARWDVNQKETAVNMDNIK----SLS 174
Query: 279 EAMSVEXXXXXXXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNII 338
E MSVE A +L+ +L +DVD TK+II
Sbjct: 175 ETMSVEKIAAIKAKRLANKRTTIKRT---------DNDEAMGTDLRAILDYDVDSTKDII 225
Query: 339 SRERQWRTRTSIFHTSGKIFSKNIFAILQSIKAREEGRHRXXXXXXXXXXXXXNKSVPQP 398
SRERQWRTRTSI ++GKIF+KNIFA+LQ IKAREEGR+R + PQP
Sbjct: 226 SRERQWRTRTSILQSTGKIFAKNIFAMLQGIKAREEGRNRPQVPNPIKMPEPARIAKPQP 285
Query: 399 IV--YNRYDQERFIKSREETEGFKIDTMGTYHGMTLKSVTEGNTPRKPALTPSTP 451
+ YNRYDQERF + +EETEGFKIDT+GTYHGM+LKSVTEG+ ++ A + P
Sbjct: 286 QLSQYNRYDQERFNRQKEETEGFKIDTLGTYHGMSLKSVTEGSLAQRKAQANNLP 340
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 174/321 (54%), Positives = 213/321 (66%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNINKKEI+ER++QIIFGEFSWPK V TNYL Y S ++GA ++YYTLECLL+ LKN+ L
Sbjct: 11 YNINKKEIVERDSQIIFGEFSWPKSVKTNYLKYGSGKKGAPREYYTLECLLYLLKNVMLQ 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEIPTQVKRVGTEE--- 587
H+ YVR+ AA +IP V RP RK++LAYLNGE T ASIDK+APLEIPTQVKR E
Sbjct: 71 HSVYVRQCAAEDIPAVNRPDRKELLAYLNGETPTCASIDKSAPLEIPTQVKRAAEGEPSS 130
Query: 588 LETPAKKPRLEDSVHLQHVKQQLAARLDA-PKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
+E AKK R E++ +Q V++QLAAR D KE +V +DNIK SL+E MSVE
Sbjct: 131 VEVAAKKARFEET-QVQKVREQLAARWDVNQKETAVNMDNIK----SLSETMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A +L+ +L +DVD TK+IISRERQWRTRTS
Sbjct: 186 KAKRLANKRTTIKRT---------DNDEAMGTDLRAILDYDVDSTKDIISRERQWRTRTS 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGRHRXXXXXXXXXXXXXNKSVPQPIV--YNRYDQE 764
I ++GKIF+KNIFA+LQ IKAREEGR+R + PQP + YNRYDQE
Sbjct: 237 ILQSTGKIFAKNIFAMLQGIKAREEGRNRPQVPNPIKMPEPARIAKPQPQLSQYNRYDQE 296
Query: 765 RFIKSREETEGFKIDTMGKGH 785
RF + +EETEGFKIDT+G H
Sbjct: 297 RFNRQKEETEGFKIDTLGTYH 317
Score = 337 (123.7 bits), Expect = 9.4e-28, P = 9.4e-28
Identities = 71/120 (59%), Positives = 86/120 (71%)
Query: 3 RLPSGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKREN 51
+LP+ PS KR SRTPIIIIP+ANTSLITM F++T K+ G +RE
Sbjct: 365 QLPANGPS----KRTSRTPIIIIPSANTSLITMLNAKDILQELRFMSTSDKKLQGCQREC 420
Query: 52 EILIQRSKGDGTTVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPWDANPVEIFSK 111
E+L+QR K + TV YRVIDNP KL++ +W RVVAVFVMGP WQFKGWPW+ NPV+IFSK
Sbjct: 421 EVLLQR-KRNNQTVSYRVIDNPTKLSQQEWQRVVAVFVMGPQWQFKGWPWEGNPVDIFSK 479
Score = 37 (18.1 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 536 RKAAASNIPVVP 547
RKA A+N+P P
Sbjct: 332 RKAQANNLPGAP 343
>ZFIN|ZDB-GENE-040426-1309 [details] [associations]
symbol:cdc73 "cell division cycle 73, Paf1/RNA
polymerase II complex component, homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0034243 "regulation of transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0030218 "erythrocyte differentiation" evidence=IGI] [GO:0051301
"cell division" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0016593
"Cdc73/Paf1 complex" evidence=IDA] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=IMP]
ZFIN:ZDB-GENE-040426-1309 GO:GO:0007507 GO:GO:0051301 GO:GO:0030218
CTD:79577 eggNOG:COG5157 GeneTree:ENSGT00390000001114
HOGENOM:HOG000007819 HOVERGEN:HBG055033 KO:K15175 OrthoDB:EOG4PC9RV
GO:GO:0016593 InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179
GO:GO:0034243 GO:GO:0021529 EMBL:CT573433 EMBL:FP017159
EMBL:BC053163 IPI:IPI00499017 RefSeq:NP_956642.1 UniGene:Dr.78293
IntAct:Q7T3D4 STRING:Q7T3D4 Ensembl:ENSDART00000013607
GeneID:393319 KEGG:dre:393319 InParanoid:Q7T3D4 NextBio:20814371
Uniprot:Q7T3D4
Length = 521
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 170/333 (51%), Positives = 216/333 (64%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG K+YYTL+ +LF L N+ L H +YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSILFLLNNVHLPHPSYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L+YLNGE ++S SID++AP+EI PTQVKR +E+ + AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLSYLNGESSSSTSIDRSAPIEIGLQRPTQVKRAA-DEVSSEAKKPRVE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE+ V D I+ SL+EAMSVE
Sbjct: 142 DEERVRLDKERLAARLEGHKESIVQTDQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
+K + + +VDVT++I+SRER WRTRT+I +SGK FSKN
Sbjct: 198 KT--------DLDDDITQKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSSGKNFSKN 247
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R NK P P YNRYDQERF K +EETEG
Sbjct: 248 IFAILQSVKAREEGRAPEQRQTQNQTQVDPAIRNKQ-PVPAAYNRYDQERF-KGKEETEG 305
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA+ P
Sbjct: 306 FKIDTMGTYHGMTLKSVTEGASARKAQTPAMQP 338
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 164/341 (48%), Positives = 213/341 (62%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG K+YYTL+ +LF L N+ L
Sbjct: 11 YNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSILFLLNNVHLP 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H +YVR+AA NIPVV RP RKD+L+YLNGE ++S SID++AP+EI PTQVKR +
Sbjct: 71 HPSYVRRAATENIPVVRRPDRKDLLSYLNGESSSSTSIDRSAPIEIGLQRPTQVKRAA-D 129
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
E+ + AKKPR+ED ++ K++LAARL+ KE+ V D I+ SL+EAMSVE
Sbjct: 130 EVSSEAKKPRVEDEERVRLDKERLAARLEGHKESIVQTDQIR----SLSEAMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
+K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT--------DLDDDITQKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 235
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I +SGK FSKNIFAILQS+KAREEGR R NK P P YNRYDQ
Sbjct: 236 ILQSSGKNFSKNIFAILQSVKAREEGRAPEQRQTQNQTQVDPAIRNKQ-PVPAAYNRYDQ 294
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 295 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKAQTP 334
Score = 270 (100.1 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 55/87 (63%), Positives = 64/87 (73%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSK-----GDGT---TVPYRVIDNPLKLARTDWDRVVAV 87
FVT+E K+ G +R+NE+L+QR K G T TVPYRVID PLKLA DWDRVVAV
Sbjct: 385 FVTSEEKKKQGIQRDNEVLLQRRKDQVQPGGATLSVTVPYRVIDQPLKLAPQDWDRVVAV 444
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 445 FVQGPAWQFKGWPWLLPDGSPVDIFAK 471
Score = 139 (54.0 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 35/65 (53%), Positives = 43/65 (66%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FVT+E K+ G +R+NE+L
Sbjct: 344 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVTSEEKKKQGIQRDNEVL 403
Query: 55 IQRSK 59
+QR K
Sbjct: 404 LQRRK 408
>UNIPROTKB|Q5ZLM0 [details] [associations]
symbol:CDC73 "Parafibromin" species:9031 "Gallus gallus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0000993 "RNA polymerase II core binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISS]
[GO:0019827 "stem cell maintenance" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001711 "endodermal cell fate
commitment" evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=ISS] [GO:0006378 "mRNA
polyadenylation" evidence=ISS] [GO:0045749 "negative regulation of
S phase of mitotic cell cycle" evidence=ISS] [GO:2000134 "negative
regulation of G1/S transition of mitotic cell cycle" evidence=ISS]
GO:GO:0008285 GO:GO:0045944 GO:GO:0006378 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0048147 GO:GO:0050680
GO:GO:2000134 GO:GO:0045749 GO:GO:0030177 GO:GO:0019827
GO:GO:0031648 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0031442 EMBL:AJ719714 IPI:IPI00581830 RefSeq:NP_001026436.1
UniGene:Gga.42090 STRING:Q5ZLM0 PRIDE:Q5ZLM0
Ensembl:ENSGALT00000003897 GeneID:424356 KEGG:gga:424356 CTD:79577
eggNOG:COG5157 GeneTree:ENSGT00390000001114 HOGENOM:HOG000007819
HOVERGEN:HBG055033 InParanoid:Q5ZLM0 KO:K15175 OMA:EYYTLEC
OrthoDB:EOG4PC9RV NextBio:20826697 GO:GO:0016593 GO:GO:0000993
GO:GO:0001711 GO:GO:0045638 InterPro:IPR007852 PANTHER:PTHR12466
Pfam:PF05179 Uniprot:Q5ZLM0
Length = 531
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 169/333 (50%), Positives = 213/333 (63%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVIWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+LAYLNGE +TS+SID++APLEI TQVKR +E+ AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLAYLNGETSTSSSIDRSAPLEIGLQRSTQVKRAA-DEILAEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
A K + + +VDVT++I+SRER WRTRT+I ++GK F+KN
Sbjct: 198 KT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFAKN 248
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R NK P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNTAPTDPTLRNKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 162/341 (47%), Positives = 210/341 (61%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YN KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNTQKKEIVVKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+LAYLNGE +TS+SID++APLEI TQVKR +
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLAYLNGETSTSSSIDRSAPLEIGLQRSTQVKRAA-D 129
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
E+ AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 130 EILAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I ++GK F+KNIFAILQS+KAREEGR R NK P P YNRYDQ
Sbjct: 237 ILQSTGKNFAKNIFAILQSVKAREEGRAPEQRPAPNTAPTDPTLRNKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTP 335
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 53/87 (60%), Positives = 61/87 (70%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSKGD----GTTV----PYRVIDNPLKLARTDWDRVVAV 87
FV ++ K+ G +RENE LIQR K GTTV PYRV+D PLKL DWDRVVAV
Sbjct: 386 FVPSDEKKKQGCQRENETLIQRRKDQMQPGGTTVSVTVPYRVVDQPLKLMPQDWDRVVAV 445
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 446 FVQGPAWQFKGWPWLLPDGSPVDIFAK 472
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/79 (50%), Positives = 46/79 (58%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSKGD----GTTVPYRV 69
IQR K GTTV V
Sbjct: 405 IQRRKDQMQPGGTTVSVTV 423
>UNIPROTKB|E1BPQ8 [details] [associations]
symbol:CDC73 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000134 "negative regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045749 "negative
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031442
"positive regulation of mRNA 3'-end processing" evidence=IEA]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0001711 "endodermal cell fate
commitment" evidence=IEA] [GO:0000993 "RNA polymerase II core
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
GO:GO:0045944 GO:GO:0006378 GO:GO:0071222 GO:GO:0000122
GO:GO:0048147 GO:GO:0050680 GO:GO:2000134 GO:GO:0045749
GO:GO:0030177 GO:GO:0019827 GO:GO:0031648 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 CTD:79577
GeneTree:ENSGT00390000001114 KO:K15175 OMA:EYYTLEC GO:GO:0016593
GO:GO:0001711 GO:GO:0045638 InterPro:IPR007852 PANTHER:PTHR12466
Pfam:PF05179 EMBL:DAAA02042323 EMBL:DAAA02042324 IPI:IPI00687312
RefSeq:NP_001178201.1 UniGene:Bt.97238 ProteinModelPortal:E1BPQ8
SMR:E1BPQ8 Ensembl:ENSBTAT00000022205 GeneID:100139547
KEGG:bta:100139547 NextBio:20790410 Uniprot:E1BPQ8
Length = 531
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 170/333 (51%), Positives = 210/333 (63%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
A K + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 KT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 164/341 (48%), Positives = 208/341 (60%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR R K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTP 335
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 53/87 (60%), Positives = 61/87 (70%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAV 87
FV ++ K+ G +RENE LIQR K GT TVPYRV+D PLKL DWDRVVAV
Sbjct: 386 FVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAV 445
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 446 FVQGPAWQFKGWPWLLPDGSPVDIFAK 472
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/65 (53%), Positives = 41/65 (63%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSK 59
IQR K
Sbjct: 405 IQRRK 409
>UNIPROTKB|A2SXS7 [details] [associations]
symbol:HRPT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000134 "negative regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048147 "negative regulation of fibroblast
proliferation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0031648 "protein destabilization" evidence=IEA]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=IEA] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0001711 "endodermal cell fate commitment" evidence=IEA]
[GO:0000993 "RNA polymerase II core binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] GO:GO:0045944 GO:GO:0006378
GO:GO:0071222 GO:GO:0000122 GO:GO:0048147 GO:GO:0050680
GO:GO:2000134 GO:GO:0045749 GO:GO:0030177 GO:GO:0019827
GO:GO:0031648 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0031442 CTD:79577 eggNOG:COG5157 GeneTree:ENSGT00390000001114
HOGENOM:HOG000007819 HOVERGEN:HBG055033 KO:K15175 OMA:EYYTLEC
OrthoDB:EOG4PC9RV GO:GO:0016593 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AAEX03018285
EMBL:AAEX03018286 EMBL:DQ366291 RefSeq:NP_001074976.1
UniGene:Cfa.19601 SMR:A2SXS7 STRING:A2SXS7
Ensembl:ENSCAFT00000016748 GeneID:478955 KEGG:cfa:478955
InParanoid:A2SXS7 NextBio:20854213 Uniprot:A2SXS7
Length = 531
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 170/333 (51%), Positives = 210/333 (63%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
A K + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 KT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 164/341 (48%), Positives = 208/341 (60%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR R K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTP 335
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 53/87 (60%), Positives = 61/87 (70%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAV 87
FV ++ K+ G +RENE LIQR K GT TVPYRV+D PLKL DWDRVVAV
Sbjct: 386 FVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAV 445
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 446 FVQGPAWQFKGWPWLLPDGSPVDIFAK 472
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/65 (53%), Positives = 41/65 (63%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSK 59
IQR K
Sbjct: 405 IQRRK 409
>UNIPROTKB|Q6P1J9 [details] [associations]
symbol:CDC73 "Parafibromin" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IDA] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IDA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0031648 "protein destabilization" evidence=IMP]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISS]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=IMP] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000993 "RNA polymerase II core binding"
evidence=IDA] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IMP] [GO:0045638 "negative regulation
of myeloid cell differentiation" evidence=IDA] [GO:0019827 "stem
cell maintenance" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:2000134 "negative regulation
of G1/S transition of mitotic cell cycle" evidence=IDA] [GO:0030177
"positive regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0001711 "endodermal cell fate commitment" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0016055
GO:GO:0045944 GO:GO:0006378 EMBL:CH471067 GO:GO:0006351
GO:GO:0071222 GO:GO:0000122 GO:GO:0007049 GO:GO:0048147
GO:GO:0050680 GO:GO:2000134 GO:GO:0045749 GO:GO:0030177
GO:GO:0019827 EMBL:AL390863 GO:GO:0031648 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 CTD:79577 eggNOG:COG5157
HOVERGEN:HBG055033 KO:K15175 OMA:EYYTLEC OrthoDB:EOG4PC9RV
GO:GO:0016593 GO:GO:0000993 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AF312865
EMBL:AK026969 EMBL:AK314772 EMBL:AL139133 EMBL:BC007325
EMBL:BC014351 EMBL:BC065037 IPI:IPI00300659 RefSeq:NP_078805.3
UniGene:Hs.378996 ProteinModelPortal:Q6P1J9 SMR:Q6P1J9
DIP:DIP-37884N IntAct:Q6P1J9 STRING:Q6P1J9 PhosphoSite:Q6P1J9
DMDM:74749063 PaxDb:Q6P1J9 PRIDE:Q6P1J9 DNASU:79577
Ensembl:ENST00000367435 GeneID:79577 KEGG:hsa:79577 UCSC:uc001gtb.3
GeneCards:GC01P193090 HGNC:HGNC:16783 HPA:CAB016359 MIM:145000
MIM:145001 MIM:607393 MIM:608266 neXtProt:NX_Q6P1J9 Orphanet:99879
Orphanet:99877 Orphanet:99880 Orphanet:143 PharmGKB:PA29464
InParanoid:Q6P1J9 PhylomeDB:Q6P1J9 ChiTaRS:CDC73 GenomeRNAi:79577
NextBio:68562 ArrayExpress:Q6P1J9 Bgee:Q6P1J9 CleanEx:HS_CDC73
Genevestigator:Q6P1J9 GermOnline:ENSG00000134371 Uniprot:Q6P1J9
Length = 531
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 170/333 (51%), Positives = 210/333 (63%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
A K + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 KT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 164/341 (48%), Positives = 208/341 (60%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR R K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTP 335
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 53/87 (60%), Positives = 61/87 (70%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAV 87
FV ++ K+ G +RENE LIQR K GT TVPYRV+D PLKL DWDRVVAV
Sbjct: 386 FVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAV 445
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 446 FVQGPAWQFKGWPWLLPDGSPVDIFAK 472
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/65 (53%), Positives = 41/65 (63%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSK 59
IQR K
Sbjct: 405 IQRRK 409
>MGI|MGI:2384876 [details] [associations]
symbol:Cdc73 "cell division cycle 73, Paf1/RNA polymerase II
complex component" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IMP] [GO:0000993 "RNA polymerase II core
binding" evidence=ISO] [GO:0001711 "endodermal cell fate
commitment" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010390 "histone
monoubiquitination" evidence=ISO] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=ISO] [GO:0031442 "positive regulation of mRNA 3'-end
processing" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=ISO] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO]
[GO:0033523 "histone H2B ubiquitination" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=ISO]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISO] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IDA] [GO:2000134 "negative regulation of G1/S transition
of mitotic cell cycle" evidence=ISO] MGI:MGI:2384876 GO:GO:0008285
GO:GO:0016055 GO:GO:0045944 GO:GO:0006378 GO:GO:0006351
GO:GO:0071222 GO:GO:0000122 GO:GO:0007049 GO:GO:0048147
GO:GO:0050680 GO:GO:2000134 GO:GO:0045749 GO:GO:0030177
GO:GO:0019827 GO:GO:0031648 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0031442 CTD:79577 eggNOG:COG5157
GeneTree:ENSGT00390000001114 HOGENOM:HOG000007819
HOVERGEN:HBG055033 KO:K15175 OMA:EYYTLEC OrthoDB:EOG4PC9RV
GO:GO:0016593 GO:GO:0000993 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AK080861
EMBL:BC027756 EMBL:BC031127 IPI:IPI00170345 RefSeq:NP_666103.1
UniGene:Mm.156727 UniGene:Mm.393505 UniGene:Mm.398849
ProteinModelPortal:Q8JZM7 SMR:Q8JZM7 IntAct:Q8JZM7 STRING:Q8JZM7
PhosphoSite:Q8JZM7 PaxDb:Q8JZM7 PRIDE:Q8JZM7
Ensembl:ENSMUST00000018337 GeneID:214498 KEGG:mmu:214498
UCSC:uc007cwx.1 InParanoid:Q8JZM7 NextBio:374332 Bgee:Q8JZM7
Genevestigator:Q8JZM7 GermOnline:ENSMUSG00000026361 Uniprot:Q8JZM7
Length = 531
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 170/333 (51%), Positives = 210/333 (63%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
A K + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 KT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 164/341 (48%), Positives = 208/341 (60%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAMSVE
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMSVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR R K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTP 335
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 53/87 (60%), Positives = 61/87 (70%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAV 87
FV ++ K+ G +RENE LIQR K GT TVPYRV+D PLKL DWDRVVAV
Sbjct: 386 FVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAV 445
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 446 FVQGPAWQFKGWPWLLPDGSPVDIFAK 472
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/65 (53%), Positives = 41/65 (63%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSK 59
IQR K
Sbjct: 405 IQRRK 409
>RGD|1311766 [details] [associations]
symbol:Cdc73 "cell division cycle 73" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO;ISS] [GO:0000993 "RNA
polymerase II core binding" evidence=IEA;ISO;ISS] [GO:0001711
"endodermal cell fate commitment" evidence=IEA;ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA;ISO;ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;ISS] [GO:0010390 "histone monoubiquitination"
evidence=IEA;ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA;ISO;ISS] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO;ISS] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA;ISO;ISS] [GO:0031442
"positive regulation of mRNA 3'-end processing"
evidence=IEA;ISO;ISS] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA;ISO;ISS]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA;ISO]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA;ISO;ISS] [GO:0045749 "negative regulation of S phase
of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;ISS] [GO:0048147 "negative regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA;ISO]
[GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA;ISO;ISS] [GO:2000134 "negative regulation of G1/S
transition of mitotic cell cycle" evidence=IEA;ISO;ISS] RGD:1311766
GO:GO:0008285 GO:GO:0016055 GO:GO:0045944 GO:GO:0006378
GO:GO:0006351 GO:GO:0071222 GO:GO:0000122 GO:GO:0007049
GO:GO:0048147 GO:GO:0050680 GO:GO:2000134 GO:GO:0045749
GO:GO:0030177 GO:GO:0019827 GO:GO:0031648 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 CTD:79577 eggNOG:COG5157
HOGENOM:HOG000007819 HOVERGEN:HBG055033 KO:K15175 OrthoDB:EOG4PC9RV
GO:GO:0016593 GO:GO:0000993 GO:GO:0001711 GO:GO:0045638
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:BC097445
IPI:IPI00372006 RefSeq:NP_001019940.1 UniGene:Rn.162332
ProteinModelPortal:Q4V8C8 STRING:Q4V8C8 PhosphoSite:Q4V8C8
PRIDE:Q4V8C8 GeneID:304832 KEGG:rno:304832 UCSC:RGD:1311766
InParanoid:Q4V8C8 NextBio:653711 Genevestigator:Q4V8C8
GermOnline:ENSRNOG00000003258 Uniprot:Q4V8C8
Length = 531
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 169/333 (50%), Positives = 209/333 (62%)
Query: 126 NQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASN 185
+++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+H YVR+AA N
Sbjct: 23 DEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATEN 82
Query: 186 IPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTEELETPAKKPRLE 241
IPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E L AKKPR+E
Sbjct: 83 IPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVL-AEAKKPRIE 141
Query: 242 DSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXXXXXXXXXXXXXX 301
D ++ K++LAARL+ KE V + I+ SL+EAM VE
Sbjct: 142 DEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMLVEKIAAIKAKIMAKKRSTI 197
Query: 302 XXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTSIFHTSGKIFSKN 361
A K + + +VDVT++I+SRER WRTRT+I ++GK FSKN
Sbjct: 198 KT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKN 248
Query: 362 IFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQERFIKSREETEG 418
IFAILQS+KAREEGR R K P P YNRYDQERF K +EETEG
Sbjct: 249 IFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQERF-KGKEETEG 306
Query: 419 FKIDTMGTYHGMTLKSVTEGNTPRK---PALTP 448
FKIDTMGTYHGMTLKSVTEG + RK PA P
Sbjct: 307 FKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 163/341 (47%), Positives = 207/341 (60%)
Query: 471 YNINKKEIIERENQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLN 530
YNI KKEI+ + +++IFGEFSWPK+V TNY+ + + +EG ++YYTL+ +LF L N+ L+
Sbjct: 11 YNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLS 70
Query: 531 HTAYVRKAAASNIPVVPRPYRKDILAYLNGEVATSASIDKTAPLEI----PTQVKRVGTE 586
H YVR+AA NIPVV RP RKD+L YLNGE +TSASID++APLEI TQVKR E
Sbjct: 71 HPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADE 130
Query: 587 ELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVTLDNIKFGPGSLTEAMSVEXXXXX 646
L AKKPR+ED ++ K++LAARL+ KE V + I+ SL+EAM VE
Sbjct: 131 VL-AEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIR----SLSEAMLVEKIAAI 185
Query: 647 XXXXXXXXXXXXXXVAXXXXXXXXXXXXAEKDNLKDMLAFDVDVTKNIISRERQWRTRTS 706
A K + + +VDVT++I+SRER WRTRT+
Sbjct: 186 KAKIMAKKRSTIKT-------DLDDDITALKQ--RSFVDAEVDVTRDIVSRERVWRTRTT 236
Query: 707 IFHTSGKIFSKNIFAILQSIKAREEGR---HRXXXXXXXXXXXXXNKSVPQPIVYNRYDQ 763
I ++GK FSKNIFAILQS+KAREEGR R K P P YNRYDQ
Sbjct: 237 ILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQ-PIPAAYNRYDQ 295
Query: 764 ERFIKSREETEGFKIDTMGKGHMFVIS--TQSVST-EPQCP 801
ERF K +EETEGFKIDTMG H + T+ S + Q P
Sbjct: 296 ERF-KGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTP 335
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 53/87 (60%), Positives = 61/87 (70%)
Query: 36 FVTTEAKRAAGSKRENEILIQRSKGD----GT----TVPYRVIDNPLKLARTDWDRVVAV 87
FV ++ K+ G +RENE LIQR K GT TVPYRV+D PLKL DWDRVVAV
Sbjct: 386 FVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAV 445
Query: 88 FVMGPAWQFKGWPW---DANPVEIFSK 111
FV GPAWQFKGWPW D +PV+IF+K
Sbjct: 446 FVQGPAWQFKGWPWLLPDGSPVDIFAK 472
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/65 (53%), Positives = 41/65 (63%)
Query: 6 SGAPSPSHQKRISRTPIIIIPAANTSLITM-----------FVTTEAKRAAGSKRENEIL 54
S A P +QK+ SRTPIIIIPAA TSLITM FV ++ K+ G +RENE L
Sbjct: 345 SQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETL 404
Query: 55 IQRSK 59
IQR K
Sbjct: 405 IQRRK 409
>WB|WBGene00018064 [details] [associations]
symbol:F35F11.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 eggNOG:COG5157
GeneTree:ENSGT00390000001114 KO:K15175 InterPro:IPR007852
PANTHER:PTHR12466 Pfam:PF05179 EMBL:FO081297
ProteinModelPortal:Q9N5U5 SMR:Q9N5U5 DIP:DIP-25821N
MINT:MINT-1079424 STRING:Q9N5U5 PaxDb:Q9N5U5
EnsemblMetazoa:F35F11.1.1 EnsemblMetazoa:F35F11.1.2
KEGG:cel:CELE_F35F11.1 UCSC:F35F11.1 CTD:177160 WormBase:F35F11.1
HOGENOM:HOG000022407 InParanoid:Q9N5U5 OMA:AIQRQKN NextBio:895606
Uniprot:Q9N5U5
Length = 517
Score = 251 (93.4 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 54/122 (44%), Positives = 76/122 (62%)
Query: 1 NTRLPSGAPSPSH-QKRISRTPIIIIPAANTSLITMF-----------VTTEAKRAAGSK 48
+T SG+ + + KR SR+PIII+P+A ++I ++ V + +R +K
Sbjct: 333 STATSSGSSAAQNGSKRTSRSPIIIVPSAMNTMINLYNVRDILQNFSYVPVDQRRKETNK 392
Query: 49 RENEILIQRSKGDGTTVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPWDANPVEI 108
+ ++ IQR K +G T RVIDN KLA DWDRV+AVFVMG AWQFKGW W+ NP +I
Sbjct: 393 KPVDLAIQRQK-NGVTYNIRVIDNAEKLANDDWDRVIAVFVMGVAWQFKGWKWNGNPTDI 451
Query: 109 FS 110
F+
Sbjct: 452 FT 453
Score = 157 (60.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 48/168 (28%), Positives = 83/168 (49%)
Query: 104 NPVEIFSKNLAVSRNF----IQTTSCNQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYT 159
+P+E K++ F + + + + FG++++ KD T+ Y S E +Y+
Sbjct: 2 DPLEALQKHVQRPEEFPLREVTVSGISYVAFGDYAYKKDTETSLQIYGKSDE-----FYS 56
Query: 160 LECLLFFLKNIGLNHTAYVRKAAASNIPVVPRPYRKDILAYLNGEVAT-SASIDKTAPLE 218
LE L+ FLK NH YV++AAA+ + V R RK++ YL G+ A +++ PL
Sbjct: 57 LESLVVFLKYSHENHGVYVKEAAAAGVRAVTRIDRKNVTEYLQGDRTDFPALMNQVNPLS 116
Query: 219 IPTQVKRVGTEELETPAKKPRLEDSVHLQHVKQQLAARLDAPKEASVT 266
+ R E AKKPRL+ + + + D P+E++V+
Sbjct: 117 L-----RQLLHSSEPEAKKPRLDGEAAGEPMDTSTS---DEPQESAVS 156
Score = 149 (57.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 485 IIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASNIP 544
+ FG++++ KD T+ Y S E +Y+LE L+ FLK NH YV++AAA+ +
Sbjct: 30 VAFGDYAYKKDTETSLQIYGKSDE-----FYSLESLVVFLKYSHENHGVYVKEAAAAGVR 84
Query: 545 VVPRPYRKDILAYLNGEVAT-SASIDKTAPLEIPTQVKRVGTEELETPAKKPRLEDSVHL 603
V R RK++ YL G+ A +++ PL + R E AKKPRL+
Sbjct: 85 AVTRIDRKNVTEYLQGDRTDFPALMNQVNPLSL-----RQLLHSSEPEAKKPRLDGEAAG 139
Query: 604 QHVKQQLAARLDAPKEASVT 623
+ + + D P+E++V+
Sbjct: 140 EPMDTSTS---DEPQESAVS 156
>TAIR|locus:2077076 [details] [associations]
symbol:PHP "PLANT HOMOLOGOUS TO PARAFIBROMIN"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP] [GO:0070860 "RNA polymerase I core factor complex"
evidence=ISS] GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009911 GO:GO:0010228 GO:GO:0051568 eggNOG:COG5157 KO:K15175
InterPro:IPR007852 PANTHER:PTHR12466 Pfam:PF05179 EMBL:AP000731
EMBL:AY065437 EMBL:AY142611 IPI:IPI00542974 RefSeq:NP_188898.1
UniGene:At.28485 ProteinModelPortal:Q9LJ87 SMR:Q9LJ87 PaxDb:Q9LJ87
PRIDE:Q9LJ87 EnsemblPlants:AT3G22590.1 GeneID:821831
KEGG:ath:AT3G22590 TAIR:At3g22590 HOGENOM:HOG000265304
InParanoid:Q9LJ87 OMA:VWERLEE PhylomeDB:Q9LJ87
ProtClustDB:CLSN2684149 ArrayExpress:Q9LJ87 Genevestigator:Q9LJ87
Uniprot:Q9LJ87
Length = 415
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 21 PIIIIPAANTSLITMFVTTE-------------AKRAAGSKRENEILIQR--SKG-DGTT 64
PII++P+A +LIT++ E AK G K + I +Q+ S+ +
Sbjct: 253 PIILVPSAFQTLITIYNVKEFLEDGVYIPNDVKAKEMKGLKPDC-ITVQKKFSRDRERVV 311
Query: 65 VPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPWDANPVEIFSK 111
Y V D P L DWDRVVAVFV+G WQFK WP+ + VEIF+K
Sbjct: 312 TAYEVRDKPSALKPDDWDRVVAVFVLGKDWQFKDWPFKDH-VEIFNK 357
Score = 138 (53.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 120 IQTTSCNQIIFGEFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVR 179
I+ N E+S+P T Y S+ G++ YTLE L+ ++KN L H Y++
Sbjct: 19 IERVGANYRFGSEYSFPCATETAY----RSKSGSL---YTLEALVHYVKNQQLKHGEYMQ 71
Query: 180 KAAASNIPVVPRPYRKDILAYLNGEVATSASID 212
+++P V P RK +L YL G VA+S SID
Sbjct: 72 STVKNSVPAVTLPDRKPLLDYLTGRVASSDSID 104
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 487 FG-EFSWPKDVNTNYLHYQSSREGAVKKYYTLECLLFFLKNIGLNHTAYVRKAAASNIPV 545
FG E+S+P T Y S+ G++ YTLE L+ ++KN L H Y++ +++P
Sbjct: 28 FGSEYSFPCATETAY----RSKSGSL---YTLEALVHYVKNQQLKHGEYMQSTVKNSVPA 80
Query: 546 VPRPYRKDILAYLNGEVATSASID 569
V P RK +L YL G VA+S SID
Sbjct: 81 VTLPDRKPLLDYLTGRVASSDSID 104
Score = 52 (23.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 330 DVDVTKNIISRERQWRTRTSIFHTSGKIFSKNIFAILQSIKAREEGRHR 378
DVD I S ER ++R +I + F +++L + REE R R
Sbjct: 152 DVDYIMLIRSNERPLKSRDAILQCKNRDF----YSVLVNSTKREEERQR 196
Score = 52 (23.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 687 DVDVTKNIISRERQWRTRTSIFHTSGKIFSKNIFAILQSIKAREEGRHR 735
DVD I S ER ++R +I + F +++L + REE R R
Sbjct: 152 DVDYIMLIRSNERPLKSRDAILQCKNRDF----YSVLVNSTKREEERQR 196
>POMBASE|SPBC17G9.02c [details] [associations]
symbol:SPBC17G9.02c "RNA polymerase II accessory
factor, Cdc73 family (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=ISO] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISO] PomBase:SPBC17G9.02c GO:GO:0005829
GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006368
eggNOG:COG5157 KO:K15175 GO:GO:0016593 InterPro:IPR007852
PANTHER:PTHR12466 Pfam:PF05179 PIR:T39725 RefSeq:NP_595891.1
STRING:Q9UUE7 EnsemblFungi:SPBC17G9.02c.1 GeneID:2539616
KEGG:spo:SPBC17G9.02c HOGENOM:HOG000163861 OMA:KGYYFHF
OrthoDB:EOG4T1MWK NextBio:20800773 Uniprot:Q9UUE7
Length = 371
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 15 KRISRTPIIIIPAANTSLITM-----------FVT-TEAKRAAGSKRENEILIQRSKGDG 62
K+ +R PII++ + +SL+TM FV EA AAG R E++ K
Sbjct: 200 KKRNRDPIILLSPSASSLLTMHNIKKFLEEGIFVPPAEAAHAAGGGRGPELIALSHKSSN 259
Query: 63 T---TVPYRVIDNPLKLARTDWDRVVAVFVMGPAWQFKGWPWDANPVEIF 109
+ T+ + +++ K WDRVV VF G AWQF+ + W + P ++F
Sbjct: 260 SKFGTMRFIIVEGTEKFKPDYWDRVVCVFTTGQAWQFRDYKW-SEPHQLF 308
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 831 727 0.00086 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 617 (66 KB)
Total size of DFA: 339 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.78u 0.09s 54.87t Elapsed: 00:00:05
Total cpu time: 54.78u 0.09s 54.87t Elapsed: 00:00:05
Start: Thu Aug 15 17:08:18 2013 End: Thu Aug 15 17:08:23 2013