Query psy1114
Match_columns 480
No_of_seqs 392 out of 852
Neff 3.6
Searched_HMMs 29240
Date Fri Aug 16 19:00:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a17_H RPL10, 60S ribosomal pr 100.0 8.2E-93 2.8E-97 673.5 18.6 202 68-269 1-202 (215)
2 3j0l_J Ribosomal protein L10; 100.0 2.9E-91 9.9E-96 664.4 8.9 200 70-269 1-200 (219)
3 3iz5_I 60S ribosomal protein L 100.0 2.1E-92 7.2E-97 673.6 -14.5 202 68-269 1-202 (224)
4 2zkr_h 60S ribosomal protein L 100.0 9.3E-88 3.2E-92 638.9 15.4 202 68-269 1-202 (214)
5 3j21_N 50S ribosomal protein L 100.0 3.4E-78 1.2E-82 561.4 13.2 170 68-240 1-172 (181)
6 1vq8_H 50S ribosomal protein L 100.0 1.1E-75 3.7E-80 541.2 16.4 168 71-238 1-169 (171)
7 1ffk_F Ribosomal protein L10E; 100.0 2E-67 7E-72 480.9 16.3 155 71-238 1-155 (157)
8 2pa2_A 60S ribosomal protein L 100.0 2.4E-65 8.3E-70 464.6 11.9 150 100-249 2-151 (151)
9 4a17_H RPL10, 60S ribosomal pr 100.0 4.8E-57 1.6E-61 428.8 9.5 112 341-452 1-112 (215)
10 3j0l_J Ribosomal protein L10; 100.0 2.7E-56 9.3E-61 424.6 8.5 110 343-452 1-110 (219)
11 3iz5_I 60S ribosomal protein L 100.0 1E-56 3.5E-61 428.4 -6.8 112 341-452 1-112 (224)
12 2zkr_h 60S ribosomal protein L 100.0 9.3E-54 3.2E-58 406.3 9.2 112 341-452 1-112 (214)
13 3j21_N 50S ribosomal protein L 100.0 1.6E-53 5.6E-58 396.0 5.8 128 341-472 1-128 (181)
14 1vq8_H 50S ribosomal protein L 100.0 1.1E-51 3.7E-56 381.4 7.2 128 344-472 1-129 (171)
15 1ffk_F Ribosomal protein L10E; 100.0 4.6E-44 1.6E-48 327.0 8.7 117 344-472 1-117 (157)
16 2ftc_I Mitochondrial ribosomal 100.0 4.4E-35 1.5E-39 256.7 10.5 102 117-231 17-118 (118)
17 3r8s_M 50S ribosomal protein L 100.0 1.3E-34 4.5E-39 259.3 11.5 105 116-236 30-134 (136)
18 2pa2_A 60S ribosomal protein L 100.0 6.9E-35 2.4E-39 265.1 4.7 99 373-472 2-100 (151)
19 3bbo_O Ribosomal protein L16; 100.0 2.1E-34 7.2E-39 257.6 5.3 104 116-235 31-134 (135)
20 2zjr_J 50S ribosomal protein L 100.0 4.3E-34 1.5E-38 257.5 2.9 106 116-237 32-137 (142)
21 2zjr_J 50S ribosomal protein L 99.3 6.2E-13 2.1E-17 120.0 1.5 55 390-449 33-91 (142)
22 2ftc_I Mitochondrial ribosomal 99.2 2.5E-12 8.6E-17 112.7 4.0 56 390-448 17-76 (118)
23 3r8s_M 50S ribosomal protein L 99.2 1.6E-11 5.4E-16 110.2 4.7 61 264-326 72-132 (136)
24 3bbo_O Ribosomal protein L16; 98.9 2.3E-10 7.7E-15 102.6 2.4 56 270-327 79-134 (135)
25 2pzz_A UPF0201 protein MJ1564; 33.6 20 0.00069 32.2 2.4 42 397-452 55-97 (147)
26 3d7a_A UPF0201 protein PH1010; 31.5 21 0.00071 31.6 2.0 44 397-455 61-105 (138)
27 2kvt_A Uncharacterized protein 31.0 21 0.0007 28.9 1.7 49 80-136 3-55 (71)
28 2kvt_A Uncharacterized protein 25.6 16 0.00056 29.5 0.3 49 353-409 3-55 (71)
29 1r45_A Exoenzyme C3, mono-ADP- 25.5 1.3E+02 0.0045 27.4 6.4 101 212-332 64-182 (204)
30 3pkz_A Recombinase SIN; small 23.9 84 0.0029 26.1 4.4 61 205-271 8-68 (124)
31 1vfj_A Nitrogen regulatory pro 21.2 3.5E+02 0.012 22.3 7.7 92 203-329 4-96 (116)
32 1cz6_A Protein (androctonin); 21.1 32 0.0011 22.8 1.0 18 68-85 9-26 (26)
33 2eg2_A Nitrogen regulatory pro 20.4 3.6E+02 0.012 22.1 7.7 91 202-327 3-94 (112)
No 1
>4a17_H RPL10, 60S ribosomal protein L10; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_H 4a1c_H 4a1e_H
Probab=100.00 E-value=8.2e-93 Score=673.51 Aligned_cols=202 Identities=57% Similarity=0.917 Sum_probs=188.6
Q ss_pred ccccccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhc
Q psy1114 68 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 147 (480)
Q Consensus 68 M~rrParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~ 147 (480)
||+|||||||||+|||||||+||+|||||||+||||||++|+|||||+|+||+|+|++||||+||||||||+||||++++
T Consensus 1 M~~rParcYr~~~~~pY~r~~y~~GvP~~KI~~fd~G~kka~~~~fp~~~~L~a~E~~qIss~qIEAARia~nRyl~r~~ 80 (215)
T 4a17_H 1 MGRRPARCYRQPKGKPYPKSRYNRGVPDARIRIYDSGRKKATVEEFPYVVHIVSDEKEQITSEALEAARIAANKNLIKFI 80 (215)
T ss_dssp -CCCCGGGTSSCCSCCCCSCTTCCSCCCCSCCCCEEECTTCCTTTCCEEEEEEECSCEEEEHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCcHHhhccccCCCCchhhccCCCCCCcEEEEeCCCCcCCcccCCeeEEEEECccccCcHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCC
Q psy1114 148 GKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFP 227 (480)
Q Consensus 148 Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP 227 (480)
|+|+||||||+|||||||+|||||||||||||+|||+|||+|+||||||++||+||||+++++|+++|+|||++|++|||
T Consensus 81 GK~~fhl~IRifP~~vir~nkmls~agAdRl~tgM~~akGkp~gwvArVk~Gqilfei~g~~~~~~~A~eALr~A~~KlP 160 (215)
T 4a17_H 81 SKDAFHLRCRVHPWHVLRINKMLSCAGADRLQSGMRGAFGKALGKAARVDIGSILFSVRVKEPHVKYAIDALTRAKAKFP 160 (215)
T ss_dssp CGGGCEEEECCCCCEEEEECC-----------CTTSCCCCEEEEEEEEECTTCEEEEEEECGGGHHHHHHHHHHHGGGSS
T ss_pred CCccceEEEEECCCceeeecccccccchhhhhccccCCCCCCCeEEEEEcCCCEEEEEEecCCCHHHHHHHHHHHhhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehh
Q psy1114 228 GRQKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIR 269 (480)
Q Consensus 228 ~~~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR 269 (480)
++|+|+++++||||+|++|||++|++||+|++|||+||||++
T Consensus 161 ~~tkiv~~~kwgft~~~~~~~~~~~~~~~l~~dg~~~k~~~~ 202 (215)
T 4a17_H 161 GRQKVVTSQKWGFTKLTRAQYSRLRNQKKLVTDGSNVKVIGE 202 (215)
T ss_dssp SCEEEEEESBCTTSSSBHHHHHHHHHTTCEEEETTEEEECCT
T ss_pred CceEEEEccccCCCccCHHHHHHHHHCCeEecCCccEEEccC
Confidence 999999999999999999999999999999999999999975
No 2
>3j0l_J Ribosomal protein L10; mammalia, translation, elongation cycle, tRNA, ribosome; 9.80A {Oryctolagus cuniculus} PDB: 3j0q_J 3izc_I 3izs_I 3o58_J 3o5h_J 3u5e_I 3u5i_I 4b6a_I
Probab=100.00 E-value=2.9e-91 Score=664.41 Aligned_cols=200 Identities=65% Similarity=1.095 Sum_probs=186.9
Q ss_pred ccccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhcCC
Q psy1114 70 LRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGK 149 (480)
Q Consensus 70 rrParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk 149 (480)
||||||||||+|||||||+||+|||||||+||||||++|+|||||+|+||+|+|++||||+||||||||+||||+|++|+
T Consensus 1 rrParcYr~~~~~pY~r~~y~~GvP~~KI~~fd~G~kka~~~efp~~~~L~a~E~~qIss~qIEAARia~nRyl~r~~GK 80 (219)
T 3j0l_J 1 RRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGR 80 (219)
T ss_dssp CCCSSSCSSCSSSCCCCSTTSTTCCCCSCCCSBCSSCSCCSSSSCCCEEEECCSCEEECHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCchhhccccCCCCCchhhccCCCCCCcEEEEeCCCCcCCcccCCeeEEEEECccccccHHHHHHHHHHHHHHHHHhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCc
Q psy1114 150 DQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGR 229 (480)
Q Consensus 150 ~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~ 229 (480)
|+||||||+|||||||+|||||||||||||+|||+|||+|+||||||++|||||||+++++|+++|+|||++|++|||++
T Consensus 81 ~~fhlwIRifP~~vir~nkmls~AgAdRl~tgMr~akGkp~gwvArVk~Gqilfei~g~~~~~~~A~eALr~A~~KLP~~ 160 (219)
T 3j0l_J 81 DAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQ 160 (219)
T ss_dssp TTCCBCCCSCCCCEEEECC-----------CCSSCCCCEEEEECEEECTTCEESCCCCCGGGHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEECCCceeeecccccccchhhhhccccCCCCCCCeEEEEEcCCCEEEEEEecCcCHHHHHHHHHHHhhhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehh
Q psy1114 230 QKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIR 269 (480)
Q Consensus 230 ~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR 269 (480)
|+|+++++||||+|++|||++|++||+|++|||+||||++
T Consensus 161 tkiv~~~kwgft~~~~~~~~~~~~~~~l~~dg~~~k~~~~ 200 (219)
T 3j0l_J 161 QKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSK 200 (219)
T ss_dssp CCCEECCCSSSSSCSCHHHHTTTTSCCSCCCSSSCCCSCC
T ss_pred eEEEEecccCccccCHHHHHHHHHCCeEecCCccEEEccC
Confidence 9999999999999999999999999999999999999874
No 3
>3iz5_I 60S ribosomal protein L10 (L10E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_I 1s1i_I 3jyw_I
Probab=100.00 E-value=2.1e-92 Score=673.61 Aligned_cols=202 Identities=65% Similarity=1.076 Sum_probs=168.4
Q ss_pred ccccccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhc
Q psy1114 68 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 147 (480)
Q Consensus 68 M~rrParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~ 147 (480)
||+|||||||||+|||||||+||+|||||||+||||||++|+|||||+|+||+|+|++||||+||||||||+||||+|++
T Consensus 1 M~~rParcYr~~~~~pY~r~~y~rGvP~~KI~~fd~G~kka~~~efp~~~~L~a~E~~qIss~qIEAARia~nRyl~r~~ 80 (224)
T 3iz5_I 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNA 80 (224)
T ss_dssp --------------------------------CCCCCSCCCGGGTSSCCSCCCCCTTTSCSCCCCCCSSSSEECCSSCHH
T ss_pred CCCCcHhhhccccCCCCchhhccCCCCCCcEEEEeCCCCcCCcccCceEEEEEECccccccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCC
Q psy1114 148 GKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFP 227 (480)
Q Consensus 148 Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP 227 (480)
|||+||||||+|||||||+|||||||||||||+|||+|||+|+||||||++||+||||+++++|+++|+|||++|++|||
T Consensus 81 GK~~fhlwIRifP~~vir~nkmls~AgAdRl~tGMr~~kGkp~gwvArVk~Gqilfei~g~~~~~~~A~eALrrA~~KLP 160 (224)
T 3iz5_I 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFP 160 (224)
T ss_dssp HHCCCEEEEEECSCCEEEHHHHHHHHHHHHHHHHHHHCSSSCSCEEEECCCCCSEECCCCCCCCSSCSSSSSSCCCSCCC
T ss_pred CCccceEEEEeCCCceeeecccccccchhhhhccccCCCCCCCeEEEEEcCCCEEEEEEecCcCHHHHHHHHHHHhhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehh
Q psy1114 228 GRQKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIR 269 (480)
Q Consensus 228 ~~~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR 269 (480)
++|+|+++++||||+|++|||++|++||+|++|||+||||++
T Consensus 161 ~ktkiv~~~kwgft~~~~~~~~~~~~~~~l~~dg~~vk~~~~ 202 (224)
T 3iz5_I 161 GRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGS 202 (224)
T ss_dssp CCEEEEECCTTTEEEEEEECCSSSCSHHHHHHHHHHHTSSSC
T ss_pred CceEEEEecccCccccCHHHHHHHHHcCcEecCCcceEEcCC
Confidence 999999999999999999999999999999999999999874
No 4
>2zkr_h 60S ribosomal protein L10; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=9.3e-88 Score=638.90 Aligned_cols=202 Identities=73% Similarity=1.207 Sum_probs=165.2
Q ss_pred ccccccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhc
Q psy1114 68 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 147 (480)
Q Consensus 68 M~rrParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~ 147 (480)
|+||||||||+|+|||||||+||+|||||||++|||||++|++||||+|++|+|+|++||||+||||||+|+||||++.+
T Consensus 1 M~rrParcYr~~~~~pY~r~~y~~gvP~~kI~~fd~G~~~a~~~~fp~~~gL~a~E~~~Its~qIEAARia~nR~lkr~~ 80 (214)
T 2zkr_h 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSC 80 (214)
T ss_dssp ---CCGGGTSSCCSCCCCCTTTCCCCCCCCCCSSCEECSSSCSTTCSEEEEEEESSCEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccccCCCCCChhhhcCCCCCccEEEEeCCCCcCCcccCCEEEEEEECcccccCHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCC
Q psy1114 148 GKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFP 227 (480)
Q Consensus 148 Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP 227 (480)
|+|+||||||+|||||||+|||||||||||||+|||+|||+|+||||+|++|||||||+++++++++|+|||++|++|||
T Consensus 81 Gk~~fklwIRifP~~~it~nkmls~kgAdRlqtgMg~gkGkp~~wvArVkpGqilfEi~~~~v~~~~A~eALr~A~~KLP 160 (214)
T 2zkr_h 81 GKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVAKVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFP 160 (214)
T ss_dssp CTTCCEEEECCCCCEEEEECTTTCCSSCSSTTSSSTTCCCEEEEEEEEECTTCEEEEEEECSTTHHHHHHHHHHHHHTSS
T ss_pred CCcCcEEEEEECCCceeecccccccCCchhhcccccCCCCCCcEEEEEECCCCEEEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehh
Q psy1114 228 GRQKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIR 269 (480)
Q Consensus 228 ~~~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR 269 (480)
++|+|+++++||||+|++|||++|+++|+|++|||+|||+.+
T Consensus 161 ~ktkiv~~~~~gft~~~~~~~~~~~~~~~~~~dg~~~~~~~~ 202 (214)
T 2zkr_h 161 GRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPN 202 (214)
T ss_dssp SCEEEEECC---------------------------------
T ss_pred CcEEEEEeccCCccccCHHHHHHHHHCCeEecCCceEEEECC
Confidence 999999999999999999999999999999999999999974
No 5
>3j21_N 50S ribosomal protein L10E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=3.4e-78 Score=561.37 Aligned_cols=170 Identities=39% Similarity=0.644 Sum_probs=164.2
Q ss_pred ccccccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhc
Q psy1114 68 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 147 (480)
Q Consensus 68 M~rrParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~ 147 (480)
|++|||||||+++|||||||+||+||||+||++|||||++| |||+|+||+|+|++||||+||||||||+||||+|++
T Consensus 1 M~~rParcYr~~~~~pY~r~~y~~GvP~~KI~~fd~G~k~a---~fp~~~~L~a~E~~qIss~qiEAARia~nRyl~r~~ 77 (181)
T 3j21_N 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAG---DFEFEVSLHTAEPVQIRQNALEAARQQVNRYLQKNV 77 (181)
T ss_dssp --CCCSSSTTCSSSCCCCCTTTSSCCCCCSCCCCEEESCTT---SCCEEEEEEECSCEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHhhccCCCCCCchhhhcCCCCCCeEEEEecCcccC---CCCEEEEEEEcccccccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999987 999999999999999999999999999999999999
Q ss_pred CCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCC
Q psy1114 148 GKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFP 227 (480)
Q Consensus 148 Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP 227 (480)
|+||||||||+|||||||+|||||||||||||+|||+|||+|+||||||++||+||||+++++|+++|+|||++|++|||
T Consensus 78 Gk~~fhl~IRifP~~vir~nkmls~agAdRl~~gM~~~kGkp~gwvArVk~Gqilfei~~~~~~~~~A~eAlr~A~~KlP 157 (181)
T 3j21_N 78 GRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILSIRVNRQHLKFAIEGARRAAMKFP 157 (181)
T ss_dssp CTTSCEEECCCCCCCCCCCCCCCCCCTTCCSCCSSSSCSCCCCCCEEEECSSEEEEEEEECSTTHHHHHHHHHHHHHSSS
T ss_pred CCccceEEEEECCCceeeecccccccchhhhccccccccCCcceEEEEEcCCCEEEEEEecCCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cce--EEEEeCCccc
Q psy1114 228 GRQ--KIYVSKKWGF 240 (480)
Q Consensus 228 ~~~--kIvis~~wgf 240 (480)
++| +|++++..+.
T Consensus 158 ~~t~~kiv~~~~~~~ 172 (181)
T 3j21_N 158 CKCYYRIYDKEGNDV 172 (181)
T ss_dssp SCCSSCEEECCCC--
T ss_pred CCeeeEEEEeccHHH
Confidence 999 9999987643
No 6
>1vq8_H 50S ribosomal protein L10E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1vq4_H* 1vq5_H* 1vq6_H* 1vq7_H* 1s72_H* 1vq9_H* 1vqk_H* 1vql_H* 1vqm_H* 1vqn_H* 1vqo_H* 1vqp_H* 2otj_H* 2otl_H* 2qa4_H* 2qex_H* 1yhq_H* 1yi2_H* 1yij_H* 1yit_H* ...
Probab=100.00 E-value=1.1e-75 Score=541.22 Aligned_cols=168 Identities=33% Similarity=0.540 Sum_probs=154.5
Q ss_pred cccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhcCC-
Q psy1114 71 RDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGK- 149 (480)
Q Consensus 71 rParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk- 149 (480)
|||||||+++|||||||+||+|||||||++|||||++|++||||+|++|+|+|++||||+||||||+|+||||++..|+
T Consensus 1 rparcYr~~~~~~Y~r~~y~~gvP~~kI~~fd~G~~~~~~~~fp~~~~L~a~E~~~Its~qIEAaRia~~R~lkk~~Gk~ 80 (171)
T 1vq8_H 1 KPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEE 80 (171)
T ss_dssp CCGGGTSSCCSCCCCCTTTCCCCCCCCCCCSBCSCTTSCSTTCSEEEEEEESSCEEEEHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcccccccCCCCCchhhhcCCCCCCcEEEEecCCCcCCcccCCEEEEEEECcccccCHHHHHHHHHHHHHHhHHhcCCC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred CceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCc
Q psy1114 150 DQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGR 229 (480)
Q Consensus 150 ~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~ 229 (480)
|+||||||+|||||||+|||||||||||||||||+|||+|+||||+|++||+||||+++++++++|+|||++|++|||++
T Consensus 81 ~~f~iwIRifP~~~ir~nkm~T~kgAdRlq~rMg~gkG~p~~wvArVk~G~ilfei~~~~v~~~~A~eAlr~A~~KLP~k 160 (171)
T 1vq8_H 81 GDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPS 160 (171)
T ss_dssp CSCEEEECCCCCEEEEECC-----------CCSTTCCCEEEEEEEEECTTCEEEEEEECTTTHHHHHHHHHHHGGGSSSC
T ss_pred CCcEEEEEEcCCeeEeccccccccchhhhhccccccCCCCcEEEEEECCCCEEEEEECcCCCHHHHHHHHHHHHhhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCc
Q psy1114 230 QKIYVSKKW 238 (480)
Q Consensus 230 ~kIvis~~w 238 (480)
|+|+++++.
T Consensus 161 tkiv~~~~~ 169 (171)
T 1vq8_H 161 CRIDSSPAG 169 (171)
T ss_dssp EEEEECSCC
T ss_pred EEEEEecCC
Confidence 999998763
No 7
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=100.00 E-value=2e-67 Score=480.86 Aligned_cols=155 Identities=29% Similarity=0.432 Sum_probs=150.6
Q ss_pred cccccccccCCCCCCCcccccCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhcCCC
Q psy1114 71 RDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKD 150 (480)
Q Consensus 71 rParcYR~~k~kpY~rs~y~rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk~ 150 (480)
|||||||+|+|||||||+||+||||+||++|||||++|+ ||||+|++|+|+|++||||+||||||+|+||||++.+|+|
T Consensus 1 rparcyr~~~~~pY~r~~y~~gvP~~kI~~fd~G~~~a~-~~fp~~~~L~a~E~~~Its~qIEAaRia~nR~lkr~~Gk~ 79 (157)
T 1ffk_F 1 KPGAHFRNSIKPAYTRREYISGIPGKGIAQFKMGNNGAG-PTYPAQVENVVEKPVQIRHNALEAARNAANRFVQNSGAAA 79 (157)
T ss_pred CCccccccCCCCCCchhhhcCCCCCCceEEEeCCCCCcc-ccCCEEEEEEECccccCCHHHHHHHHHHHHHHHHhhcCCc
Confidence 799999999999999999999999999999999999999 9999999999999999999999999999999999988999
Q ss_pred ceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCce
Q psy1114 151 QFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQ 230 (480)
Q Consensus 151 ~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~~ 230 (480)
+||||||+|||||||+|| |||||+|||+|+||||+|++||+||||+++ ++++|+|||++|++|||++|
T Consensus 80 ~fklwIRifP~~~it~kp----------etrMg~gkG~p~~wvArVk~G~ilfei~gv--~~~~A~eAlr~A~~KlP~kt 147 (157)
T 1ffk_F 80 NYKFRIRKFPFHVIREQD----------GDGMRAPFGKSVGTAARSHGANHDFIAWVN--PDPAVEFAWRRAYMKVTPTV 147 (157)
T ss_pred ccEEEEEECCCeeeEecc----------cccccCCCCCccEEEEEEcCCCEEEEEecc--CHHHHHHHHHHHHhhCCCcE
Confidence 999999999999999999 999999999999999999999999999996 45699999999999999999
Q ss_pred EEEEeCCc
Q psy1114 231 KIYVSKKW 238 (480)
Q Consensus 231 kIvis~~w 238 (480)
+|+++++.
T Consensus 148 kiv~~~~~ 155 (157)
T 1ffk_F 148 NIDSSPAG 155 (157)
T ss_pred EEEEecCC
Confidence 99998764
No 8
>2pa2_A 60S ribosomal protein L10; QM protein, , structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Homo sapiens} SCOP: d.41.4.1
Probab=100.00 E-value=2.4e-65 Score=464.64 Aligned_cols=150 Identities=80% Similarity=1.291 Sum_probs=107.2
Q ss_pred EEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHHHHhhhhhhhhcCCCceeEEEEeCCCceeeecccccccccchhh
Q psy1114 100 IFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQ 179 (480)
Q Consensus 100 ~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLq 179 (480)
+|||||++|++||||+|++|+|+|++||||+||||||+|+||||++.+|+++||||||+|||||||+|||||||||||||
T Consensus 2 ~fd~G~~~~~~~~fp~~~~L~a~E~~~Its~qIEAaRia~~R~lkr~~Gk~~~~iwIRifP~~~ir~nkmlT~kgadRlq 81 (151)
T 2pa2_A 2 SFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQ 81 (151)
T ss_dssp -------CCCTTTCCEEEEEEECSCEEEEHHHHHHHHHHHHHHHHHHHCTTSEEEEECCSCC------------------
T ss_pred ccccCCCcCCcccCCEEEEEEECccccCCHHHHHHHHHHHHHHHhhhcCCcCcEEEEEECCCeeEeecccccccchhhhh
Confidence 79999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ccccCCCCCcceEEEEeeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCceEEEEeCCccccccChHHHH
Q psy1114 180 TGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVSKKWGFTKYDREEYE 249 (480)
Q Consensus 180 tGMr~afGKP~G~vARV~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~~kIvis~~wgfT~~~~~e~~ 249 (480)
+|||+|||+|+||||||+|||+||||+++++++++|+|||++|++|||++|+|+++++||||+|++|||+
T Consensus 82 ~gMg~gkG~p~~wvArVk~G~ilfei~~~~v~~~~A~eAlr~A~~KlP~ktkiv~~~~~gft~~~~~~~~ 151 (151)
T 2pa2_A 82 TGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFE 151 (151)
T ss_dssp -----------CCEEEECTTBEEEEEEECGGGHHHHHHHHHHHGGGSSSCEEEEEESCCCCCBC------
T ss_pred cccccCCCCccEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEEeccCCCCCCChhhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995
No 9
>4a17_H RPL10, 60S ribosomal protein L10; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_H 4a1c_H 4a1e_H
Probab=100.00 E-value=4.8e-57 Score=428.81 Aligned_cols=112 Identities=63% Similarity=1.020 Sum_probs=99.3
Q ss_pred HhhhcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhh
Q psy1114 341 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 420 (480)
Q Consensus 341 e~lRparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~ 420 (480)
|.+|||||||+++|||||||+||+|||||||++|||||++|+|||||+|+||+|+|.+||||+||||||||+||||.+++
T Consensus 1 M~~rParcYr~~~~~pY~r~~y~~GvP~~KI~~fd~G~kka~~~~fp~~~~L~a~E~~qIss~qIEAARia~nRyl~r~~ 80 (215)
T 4a17_H 1 MGRRPARCYRQPKGKPYPKSRYNRGVPDARIRIYDSGRKKATVEEFPYVVHIVSDEKEQITSEALEAARIAANKNLIKFI 80 (215)
T ss_dssp -CCCCGGGTSSCCSCCCCSCTTCCSCCCCSCCCCEEECTTCCTTTCCEEEEEEECSCEEEEHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCcHHhhccccCCCCchhhccCCCCCCcEEEEeCCCCcCCcccCCeeEEEEECccccCcHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCceEEEeeccccccccCccc
Q psy1114 421 GKDQFHIRMRLHPFHVIRINKMLSCAGADRFE 452 (480)
Q Consensus 421 Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq 452 (480)
|+|+|||+||+|||||||+|||||||||||||
T Consensus 81 GK~~fhl~IRifP~~vir~nkmls~agAdRl~ 112 (215)
T 4a17_H 81 SKDAFHLRCRVHPWHVLRINKMLSCAGADRLQ 112 (215)
T ss_dssp CGGGCEEEECCCCCEEEEECC-----------
T ss_pred CCccceEEEEECCCceeeecccccccchhhhh
Confidence 99999999999999999999999999999999
No 10
>3j0l_J Ribosomal protein L10; mammalia, translation, elongation cycle, tRNA, ribosome; 9.80A {Oryctolagus cuniculus} PDB: 3j0q_J 3izc_I 3izs_I 3o58_J 3o5h_J 3u5e_I 3u5i_I 4b6a_I
Probab=100.00 E-value=2.7e-56 Score=424.58 Aligned_cols=110 Identities=72% Similarity=1.225 Sum_probs=98.0
Q ss_pred hhcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhhCC
Q psy1114 343 LRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGK 422 (480)
Q Consensus 343 lRparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~Gk 422 (480)
+|||||||+++|||||||+||+|||||||++|||||++|+|||||+|+||+|+|.+||||+||||||||+||||.+++|+
T Consensus 1 rrParcYr~~~~~pY~r~~y~~GvP~~KI~~fd~G~kka~~~efp~~~~L~a~E~~qIss~qIEAARia~nRyl~r~~GK 80 (219)
T 3j0l_J 1 RRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGR 80 (219)
T ss_dssp CCCSSSCSSCSSSCCCCSTTSTTCCCCSCCCSBCSSCSCCSSSSCCCEEEECCSCEEECHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCchhhccccCCCCCchhhccCCCCCCcEEEEeCCCCcCCcccCCeeEEEEECccccccHHHHHHHHHHHHHHHHHhcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeCCceEEEeeccccccccCccc
Q psy1114 423 DQFHIRMRLHPFHVIRINKMLSCAGADRFE 452 (480)
Q Consensus 423 ~~fhlrvr~~PhhVlReNKMls~AGADRlq 452 (480)
|+|||+||+|||||||+|||||||||||||
T Consensus 81 ~~fhlwIRifP~~vir~nkmls~AgAdRl~ 110 (219)
T 3j0l_J 81 DAFHLRVRVHPFHVLRINKMLSCAGADRLQ 110 (219)
T ss_dssp TTCCBCCCSCCCCEEEECC-----------
T ss_pred ccceEEEEECCCceeeecccccccchhhhh
Confidence 999999999999999999999999999999
No 11
>3iz5_I 60S ribosomal protein L10 (L10E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_I 1s1i_I 3jyw_I
Probab=100.00 E-value=1e-56 Score=428.42 Aligned_cols=112 Identities=70% Similarity=1.194 Sum_probs=79.5
Q ss_pred HhhhcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhh
Q psy1114 341 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 420 (480)
Q Consensus 341 e~lRparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~ 420 (480)
|.+|||||||+++|||||||+||+||||+||++|||||++|+|||||+|+||+|+|.+||||+||||||||+||||.+++
T Consensus 1 M~~rParcYr~~~~~pY~r~~y~rGvP~~KI~~fd~G~kka~~~efp~~~~L~a~E~~qIss~qIEAARia~nRyl~r~~ 80 (224)
T 3iz5_I 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNA 80 (224)
T ss_dssp --------------------------------CCCCCSCCCGGGTSSCCSCCCCCTTTSCSCCCCCCSSSSEECCSSCHH
T ss_pred CCCCcHhhhccccCCCCchhhccCCCCCCcEEEEeCCCCcCCcccCceEEEEEECccccccHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCceEEEeeccccccccCccc
Q psy1114 421 GKDQFHIRMRLHPFHVIRINKMLSCAGADRFE 452 (480)
Q Consensus 421 Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq 452 (480)
|+|+|||+||+|||||||+|||||||||||||
T Consensus 81 GK~~fhlwIRifP~~vir~nkmls~AgAdRl~ 112 (224)
T 3iz5_I 81 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQ 112 (224)
T ss_dssp HHCCCEEEEEECSCCEEEHHHHHHHHHHHHHH
T ss_pred CCccceEEEEeCCCceeeecccccccchhhhh
Confidence 99999999999999999999999999999999
No 12
>2zkr_h 60S ribosomal protein L10; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=9.3e-54 Score=406.27 Aligned_cols=112 Identities=81% Similarity=1.394 Sum_probs=108.5
Q ss_pred HhhhcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhh
Q psy1114 341 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 420 (480)
Q Consensus 341 e~lRparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~ 420 (480)
|.+|||||||+++|||||||+||+|||||||++|||||++|+++|||+|++|+|+|.+||||+||||||||+||||.+.+
T Consensus 1 M~rrParcYr~~~~~pY~r~~y~~gvP~~kI~~fd~G~~~a~~~~fp~~~gL~a~E~~~Its~qIEAARia~nR~lkr~~ 80 (214)
T 2zkr_h 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSC 80 (214)
T ss_dssp ---CCGGGTSSCCSCCCCCTTTCCCCCCCCCCSSCEECSSSCSTTCSEEEEEEESSCEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccccCCCCCChhhhcCCCCCccEEEEeCCCCcCCcccCCEEEEEEECcccccCHHHHHHHHHHHHHHHhhcc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCceEEEeeccccccccCccc
Q psy1114 421 GKDQFHIRMRLHPFHVIRINKMLSCAGADRFE 452 (480)
Q Consensus 421 Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq 452 (480)
|+++||++||+|||||||||||||||||||||
T Consensus 81 Gk~~fklwIRifP~~~it~nkmls~kgAdRlq 112 (214)
T 2zkr_h 81 GKDGFHIRVRLHPFHVIRINKMLSCAGADRLQ 112 (214)
T ss_dssp CTTCCEEEECCCCCEEEEECTTTCCSSCSSTT
T ss_pred CCcCcEEEEEECCCceeecccccccCCchhhc
Confidence 99999999999999999999999999999999
No 13
>3j21_N 50S ribosomal protein L10E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=1.6e-53 Score=396.03 Aligned_cols=128 Identities=38% Similarity=0.631 Sum_probs=122.6
Q ss_pred HhhhcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhh
Q psy1114 341 ETLRDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNC 420 (480)
Q Consensus 341 e~lRparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~ 420 (480)
|.+|||||||+++|||||||+||+||||+||++|||||+++ |||+|+||+++|.+||||+||||||||+||||.+++
T Consensus 1 M~~rParcYr~~~~~pY~r~~y~~GvP~~KI~~fd~G~k~a---~fp~~~~L~a~E~~qIss~qiEAARia~nRyl~r~~ 77 (181)
T 3j21_N 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAG---DFEFEVSLHTAEPVQIRQNALEAARQQVNRYLQKNV 77 (181)
T ss_dssp --CCCSSSTTCSSSCCCCCTTTSSCCCCCSCCCCEEESCTT---SCCEEEEEEECSCEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHhhccCCCCCCchhhhcCCCCCCeEEEEecCcccC---CCCEEEEEEEcccccccHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999999999987 999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCceEEEeeccccccccCccccCCceeeecCCCCchhHhhh
Q psy1114 421 GKDQFHIRMRLHPFHVIRINKMLSCAGADRFELDGCNVKYRAEHGPLAAWKK 472 (480)
Q Consensus 421 Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq~dG~~~~~~~~~g~~~~~~~ 472 (480)
|+||||++||+|||||||+||||||||||||| +||+-.|+++.|..++...
T Consensus 78 Gk~~fhl~IRifP~~vir~nkmls~agAdRl~-~gM~~~kGkp~gwvArVk~ 128 (181)
T 3j21_N 78 GRSNYHFKIRVYPFQVLRENPMATGRKADRYG-NGMRRPFGKPIGLAARLKK 128 (181)
T ss_dssp CTTSCEEECCCCCCCCCCCCCCCCCCTTCCSC-CSSSSCSCCCCCCEEEECS
T ss_pred CCccceEEEEECCCceeeecccccccchhhhc-cccccccCCcceEEEEEcC
Confidence 99999999999999999999999999999999 9999999999998876654
No 14
>1vq8_H 50S ribosomal protein L10E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1vq4_H* 1vq5_H* 1vq6_H* 1vq7_H* 1s72_H* 1vq9_H* 1vqk_H* 1vql_H* 1vqm_H* 1vqn_H* 1vqo_H* 1vqp_H* 2otj_H* 2otl_H* 2qa4_H* 2qex_H* 1yhq_H* 1yi2_H* 1yij_H* 1yit_H* ...
Probab=100.00 E-value=1.1e-51 Score=381.40 Aligned_cols=128 Identities=30% Similarity=0.561 Sum_probs=113.2
Q ss_pred hcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhhCC-
Q psy1114 344 RDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGK- 422 (480)
Q Consensus 344 RparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~Gk- 422 (480)
|||||||+++|||||||+||+|||||||++|||||++|+++|||+|++|+++|.+||||+||||||+|+||||.+.+|+
T Consensus 1 rparcYr~~~~~~Y~r~~y~~gvP~~kI~~fd~G~~~~~~~~fp~~~~L~a~E~~~Its~qIEAaRia~~R~lkk~~Gk~ 80 (171)
T 1vq8_H 1 KPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEE 80 (171)
T ss_dssp CCGGGTSSCCSCCCCCTTTCCCCCCCCCCCSBCSCTTSCSTTCSEEEEEEESSCEEEEHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcccccccCCCCCchhhhcCCCCCCcEEEEecCCCcCCcccCCEEEEEEECcccccCHHHHHHHHHHHHHHhHHhcCCC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeCCceEEEeeccccccccCccccCCceeeecCCCCchhHhhh
Q psy1114 423 DQFHIRMRLHPFHVIRINKMLSCAGADRFELDGCNVKYRAEHGPLAAWKK 472 (480)
Q Consensus 423 ~~fhlrvr~~PhhVlReNKMls~AGADRlq~dG~~~~~~~~~g~~~~~~~ 472 (480)
|+||++||+||||+|||||||||||||||| +||+-.|+.+.|..++...
T Consensus 81 ~~f~iwIRifP~~~ir~nkm~T~kgAdRlq-~rMg~gkG~p~~wvArVk~ 129 (171)
T 1vq8_H 81 GDYKMTLRKFPHQVLRENKQATGAGADRVS-DGMRAAFGKIVGTAARVQA 129 (171)
T ss_dssp CSCEEEECCCCCEEEEECC------------CCSTTCCCEEEEEEEEECT
T ss_pred CCcEEEEEEcCCeeEeccccccccchhhhh-ccccccCCCCcEEEEEECC
Confidence 999999999999999999999999999999 9999999999888776654
No 15
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=100.00 E-value=4.6e-44 Score=327.02 Aligned_cols=117 Identities=26% Similarity=0.471 Sum_probs=112.8
Q ss_pred hcccccccccCCCCCCCCCcCCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhhCCC
Q psy1114 344 RDQNSYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKD 423 (480)
Q Consensus 344 RparcYR~~k~kpY~r~~y~rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~Gk~ 423 (480)
|||||||+++||||||||||+||||+||++|||||++|+ +|||+|++|+++|.+||||+||||||+|+||||.+.+|+|
T Consensus 1 rparcyr~~~~~pY~r~~y~~gvP~~kI~~fd~G~~~a~-~~fp~~~~L~a~E~~~Its~qIEAaRia~nR~lkr~~Gk~ 79 (157)
T 1ffk_F 1 KPGAHFRNSIKPAYTRREYISGIPGKGIAQFKMGNNGAG-PTYPAQVENVVEKPVQIRHNALEAARNAANRFVQNSGAAA 79 (157)
T ss_pred CCccccccCCCCCCchhhhcCCCCCCceEEEeCCCCCcc-ccCCEEEEEEECccccCCHHHHHHHHHHHHHHHHhhcCCc
Confidence 799999999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred ceEEEEEeCCceEEEeeccccccccCccccCCceeeecCCCCchhHhhh
Q psy1114 424 QFHIRMRLHPFHVIRINKMLSCAGADRFELDGCNVKYRAEHGPLAAWKK 472 (480)
Q Consensus 424 ~fhlrvr~~PhhVlReNKMls~AGADRlq~dG~~~~~~~~~g~~~~~~~ 472 (480)
+|||+||+||||+|++|+ | +||+-.|+.+.|..++...
T Consensus 80 ~fklwIRifP~~~it~kp----------e-trMg~gkG~p~~wvArVk~ 117 (157)
T 1ffk_F 80 NYKFRIRKFPFHVIREQD----------G-DGMRAPFGKSVGTAARSHG 117 (157)
T ss_pred ccEEEEEECCCeeeEecc----------c-ccccCCCCCccEEEEEEcC
Confidence 999999999999999999 5 9999999999988776654
No 16
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=100.00 E-value=4.4e-35 Score=256.69 Aligned_cols=102 Identities=21% Similarity=0.183 Sum_probs=96.3
Q ss_pred EEEeeccccccchhHHHHHHHHhhhhhhhhcCCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEEe
Q psy1114 117 VHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVARV 196 (480)
Q Consensus 117 v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vARV 196 (480)
.+|+++|++||||+||||||+|+||||.+ +.+||+|||+|||||||++| ++++|++|+|+|++|||||
T Consensus 17 ~gL~a~e~~~it~~qiEaaR~ai~r~l~~---k~~~~~wirv~P~~pvt~k~---------~e~RMG~GKG~~~~wva~V 84 (118)
T 2ftc_I 17 FAILALGGGYLHWGHFEMMRLTINRSMDP---KNMFAIWRVPAPFKPITRKS---------VGHRMGGGKGAIDHYVTPV 84 (118)
T ss_pred EEEEECcCCccCHHHHHHHHHHHHheeec---cCCeEEEEEECCCcccCcCc---------hhcccccCCCCccEEEEEE
Confidence 68999999999999999999999999954 24689999999999999999 8999999999999999999
Q ss_pred eCCCeEEEEEecCCCHHHHHHHHHHcccCCCCceE
Q psy1114 197 NIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQK 231 (480)
Q Consensus 197 ~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~~k 231 (480)
++||+||||.++ +++++|+|||++|++|||++|+
T Consensus 85 k~G~ilfEi~g~-~~~~~a~eAlr~a~~KlP~~~~ 118 (118)
T 2ftc_I 85 KAGRLVVEMGGR-CEFEEVQGFLDQVAHKLPFAAK 118 (118)
T ss_pred CCCCEEEEEecc-CCHHHHHHHHHHHHhhCCCCCC
Confidence 999999999995 8999999999999999999974
No 17
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=100.00 E-value=1.3e-34 Score=259.28 Aligned_cols=105 Identities=20% Similarity=0.219 Sum_probs=99.9
Q ss_pred eEEEeeccccccchhHHHHHHHHhhhhhhhhcCCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEE
Q psy1114 116 CVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVAR 195 (480)
Q Consensus 116 ~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vAR 195 (480)
..+|+++|++||||+||||||+|+||||.+ .| ++|||+|||||||+|| ++||||+|||+|++|||+
T Consensus 30 ~~gL~a~e~~~it~~qiEaaR~ai~R~lkr-~g----k~wirv~P~~pvt~k~---------~etRMGkGKG~~~~wva~ 95 (136)
T 3r8s_M 30 SFGLKAVGRGRLTARQIEAARRAMTRAVKR-QG----KIWIRVFPDKPITEKP---------LAVRMGKGKGNVEYWVAL 95 (136)
T ss_dssp SEEEEECSCEEEEHHHHHHHHHHHHHTTCS-CS----EEEECCCCCEEEEECC---------SSCCSCSSCCEEEEEEEE
T ss_pred eEEEEECcCCeECHHHHHHHHHHHHHhhhc-Cc----EEEEEECCCCceEeCc---------hhccCCCCCCCCCEEEEE
Confidence 478999999999999999999999999986 44 8999999999999999 899999999999999999
Q ss_pred eeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCceEEEEeC
Q psy1114 196 VNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVSK 236 (480)
Q Consensus 196 V~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~~kIvis~ 236 (480)
|++||+||||.+ .+++.|+|||++|++|||++|+|++.+
T Consensus 96 Vk~G~ilfEi~g--~~~~~A~eAlr~a~~KLP~~~kiv~~~ 134 (136)
T 3r8s_M 96 IQPGKVLYEMDG--VPEELAREAFKLAAAKLPIKTTFVTKT 134 (136)
T ss_dssp ECTTCEEEEEES--SCHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred ECCCCEEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 999999999998 499999999999999999999999764
No 18
>2pa2_A 60S ribosomal protein L10; QM protein, , structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Homo sapiens} SCOP: d.41.4.1
Probab=100.00 E-value=6.9e-35 Score=265.12 Aligned_cols=99 Identities=70% Similarity=1.158 Sum_probs=60.5
Q ss_pred EEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHHhhhhhhhHhhhCCCceEEEEEeCCceEEEeeccccccccCccc
Q psy1114 373 IFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRFE 452 (480)
Q Consensus 373 ~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAARI~aNKYl~k~~Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq 452 (480)
+|||||++|+++|||+|++|+++|.+||||+||||||+|+||||.+.+|+++||++||+|||||||||||||||||||||
T Consensus 2 ~fd~G~~~~~~~~fp~~~~L~a~E~~~Its~qIEAaRia~~R~lkr~~Gk~~~~iwIRifP~~~ir~nkmlT~kgadRlq 81 (151)
T 2pa2_A 2 SFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQ 81 (151)
T ss_dssp -------CCCTTTCCEEEEEEECSCEEEEHHHHHHHHHHHHHHHHHHHCTTSEEEEECCSCC------------------
T ss_pred ccccCCCcCCcccCCEEEEEEECccccCCHHHHHHHHHHHHHHHhhhcCCcCcEEEEEECCCeeEeecccccccchhhhh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeecCCCCchhHhhh
Q psy1114 453 LDGCNVKYRAEHGPLAAWKK 472 (480)
Q Consensus 453 ~dG~~~~~~~~~g~~~~~~~ 472 (480)
.||+-.|+++.|..++...
T Consensus 82 -~gMg~gkG~p~~wvArVk~ 100 (151)
T 2pa2_A 82 -TGMRGAFGKPQGTVARVHI 100 (151)
T ss_dssp ------------CCEEEECT
T ss_pred -cccccCCCCccEEEEEECC
Confidence 9999999999998877654
No 19
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=100.00 E-value=2.1e-34 Score=257.62 Aligned_cols=104 Identities=23% Similarity=0.233 Sum_probs=99.2
Q ss_pred eEEEeeccccccchhHHHHHHHHhhhhhhhhcCCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEE
Q psy1114 116 CVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVAR 195 (480)
Q Consensus 116 ~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vAR 195 (480)
..+|+++|++||||+||||||+|+||||. ++||+|||+|||||||++| ++++|++|+|+|++|||+
T Consensus 31 ~~gL~a~e~~~it~~qiEaaR~ai~R~lk-----~~~k~wirv~P~~pvt~k~---------~e~RMG~GKG~~~~wva~ 96 (135)
T 3bbo_O 31 RYALQALEPAWITSRQIEAGRRAMTRNAR-----RGGKIWVRIFPDKPVTVRP---------AETRMGSGKGSPEYWVAV 96 (135)
T ss_dssp SEEEEESSCCCCCHHHHHHHHHHHHHTTC-----SSSCCCCCCCCCSCCCCCC---------SSCCSSCCCSCSSCCCCC
T ss_pred eEEEEECcCCccCHHHHHHHHHHHHHHhh-----hCcEEEEEeCCCcccEecc---------ccccccccCCCceEEEEE
Confidence 47999999999999999999999999995 4679999999999999999 999999999999999999
Q ss_pred eeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCceEEEEe
Q psy1114 196 VNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVS 235 (480)
Q Consensus 196 V~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~~kIvis 235 (480)
|++||+||||.+ ++++.|+|||++|++|||++|+|+++
T Consensus 97 Vk~G~ilfEi~g--v~~~~A~eAlr~a~~KLP~~~kiv~~ 134 (135)
T 3bbo_O 97 VKPGRILYEISG--VAENIARRAVAIAASKMPIRTQFIIS 134 (135)
T ss_dssp CCTTCEEEEECS--SCTTHHHHHHHHHHHHCSSCEEEECC
T ss_pred ECCCCEEEEEec--CCHHHHHHHHHHHHhhCCCcEEEEec
Confidence 999999999998 78999999999999999999999864
No 20
>2zjr_J 50S ribosomal protein L16; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.41.4.2 PDB: 1sm1_K* 2zjp_J* 2zjq_J 1nkw_K 3cf5_J* 3dll_J* 3pio_J* 1njm_K* 1nwx_K* 1njp_K* 1xbp_K* 1y69_K 1nwy_K* 3pip_J* 1pnu_K 1pny_K 1vor_N 1vou_N 1vow_N 1voy_N ...
Probab=99.98 E-value=4.3e-34 Score=257.53 Aligned_cols=106 Identities=23% Similarity=0.217 Sum_probs=100.8
Q ss_pred eEEEeeccccccchhHHHHHHHHhhhhhhhhcCCCceeEEEEeCCCceeeecccccccccchhhccccCCCCCcceEEEE
Q psy1114 116 CVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAYGKPQGTVAR 195 (480)
Q Consensus 116 ~v~Lvs~E~~qIss~ALEAARIaaNKyl~K~~Gk~~fhlrIRv~P~hVlr~nKMls~AGADRLqtGMr~afGKP~G~vAR 195 (480)
..+|+++|++||||+||||||+|+||||.+ +||+|||+|||||||+|| ++++|++|+|+|++|||+
T Consensus 32 ~~gL~a~e~~~it~~qiEAaR~ai~R~lkr-----~gk~wirv~P~~pvt~Kp---------~e~RMG~GKG~~~~wva~ 97 (142)
T 2zjr_J 32 DYGLIAMEPAWIKSNQIEACRIVMSRHFRR-----GGKIYIRIFPDKPVTKKP---------AETRMGKGKGAVEYWVSV 97 (142)
T ss_dssp SCEEEECSCBCCBHHHHHHHHHHHHHHCSS-----CCCCCCCCCCCCEECCCS---------SSCCCSSSCCTTSEEBCC
T ss_pred eEEEEECcCCeECHHHHHHHHHHHHHHhhh-----CcEEEEEeCCCcceEcCc---------ccccccccCCCCCEEEEE
Confidence 468999999999999999999999999986 469999999999999999 789999999999999999
Q ss_pred eeCCCeEEEEEecCCCHHHHHHHHHHcccCCCCceEEEEeCC
Q psy1114 196 VNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVSKK 237 (480)
Q Consensus 196 V~~GqvIfsv~~k~~~~~~AkEALrrA~~KlP~~~kIvis~~ 237 (480)
|++||+||||.+ +++++|+|||++|++|||++|+|++++.
T Consensus 98 Vk~G~ilfEi~g--v~~~~A~eAlr~A~~KLP~~~kiv~~~~ 137 (142)
T 2zjr_J 98 VKPGRVMFEVAG--VTEEQAKEAFRLAGHKLPIQTKMVKREV 137 (142)
T ss_dssp BCTTEEEECCCS--SCSTTTTTHHHHHHHTCSSCEEEECSCC
T ss_pred ECCCCEEEEEeC--CCHHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 999999999998 7899999999999999999999998763
No 21
>2zjr_J 50S ribosomal protein L16; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.41.4.2 PDB: 1sm1_K* 2zjp_J* 2zjq_J 1nkw_K 3cf5_J* 3dll_J* 3pio_J* 1njm_K* 1nwx_K* 1njp_K* 1xbp_K* 1y69_K 1nwy_K* 3pip_J* 1pnu_K 1pny_K 1vor_N 1vou_N 1vow_N 1voy_N ...
Probab=99.27 E-value=6.2e-13 Score=120.03 Aligned_cols=55 Identities=24% Similarity=0.247 Sum_probs=51.9
Q ss_pred EEEecccccccchhhHHHHHhhhhhhhHhhhCCCceEEEEEeCCceEEE----eeccccccccC
Q psy1114 390 VHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIR----INKMLSCAGAD 449 (480)
Q Consensus 390 v~Lvs~E~~QirseALEAARI~aNKYl~k~~Gk~~fhlrvr~~PhhVlR----eNKMls~AGAD 449 (480)
.+|++.|.+||+|++|||||+|+||||.+ +||++||+||||+|+ ||+|.+|+|+-
T Consensus 33 ~gL~a~e~~~it~~qiEAaR~ai~R~lkr-----~gk~wirv~P~~pvt~Kp~e~RMG~GKG~~ 91 (142)
T 2zjr_J 33 YGLIAMEPAWIKSNQIEACRIVMSRHFRR-----GGKIYIRIFPDKPVTKKPAETRMGKGKGAV 91 (142)
T ss_dssp CEEEECSCBCCBHHHHHHHHHHHHHHCSS-----CCCCCCCCCCCCEECCCSSSCCCSSSCCTT
T ss_pred EEEEECcCCeECHHHHHHHHHHHHHHhhh-----CcEEEEEeCCCcceEcCcccccccccCCCC
Confidence 68999999999999999999999999975 889999999999999 99999999964
No 22
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=99.25 E-value=2.5e-12 Score=112.75 Aligned_cols=56 Identities=23% Similarity=0.201 Sum_probs=50.0
Q ss_pred EEEecccccccchhhHHHHHhhhhhhhHhhhCCCceEEEEEeCCceEEE----eecccccccc
Q psy1114 390 VHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIR----INKMLSCAGA 448 (480)
Q Consensus 390 v~Lvs~E~~QirseALEAARI~aNKYl~k~~Gk~~fhlrvr~~PhhVlR----eNKMls~AGA 448 (480)
.+|++.|.+||||++|||||+|+||||.+ +.+||++||+||||+|+ |++|-++.|+
T Consensus 17 ~gL~a~e~~~it~~qiEaaR~ai~r~l~~---k~~~~~wirv~P~~pvt~k~~e~RMG~GKG~ 76 (118)
T 2ftc_I 17 FAILALGGGYLHWGHFEMMRLTINRSMDP---KNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 76 (118)
T ss_pred EEEEECcCCccCHHHHHHHHHHHHheeec---cCCeEEEEEECCCcccCcCchhcccccCCCC
Confidence 58999999999999999999999999954 25799999999999999 7777777775
No 23
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=99.16 E-value=1.6e-11 Score=110.19 Aligned_cols=61 Identities=18% Similarity=0.102 Sum_probs=55.6
Q ss_pred eEeehhhhhccccccCCCcceEEEEeeCceeEEeeccCCChhHHHHHHhhcccCCCCceeEEE
Q psy1114 264 DHWIIRLQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYV 326 (480)
Q Consensus 264 vk~iDR~~~g~~ga~~kp~g~~arv~igq~~~s~~~~~~~~~~~~eal~r~k~kfpg~qki~~ 326 (480)
+--..-++|+|+++||+|.|+||||++||+|++|.+. |.+++.|||++|.+|||++++|.+
T Consensus 72 pvt~k~~etRMGkGKG~~~~wva~Vk~G~ilfEi~g~--~~~~A~eAlr~a~~KLP~~~kiv~ 132 (136)
T 3r8s_M 72 PITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGV--PEELAREAFKLAAAKLPIKTTFVT 132 (136)
T ss_dssp EEEECCSSCCSCSSCCEEEEEEEEECTTCEEEEEESS--CHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred ceEeCchhccCCCCCCCCCEEEEEECCCCEEEEEeCC--CHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3344468999999999999999999999999999994 999999999999999999999875
No 24
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=98.93 E-value=2.3e-10 Score=102.57 Aligned_cols=56 Identities=25% Similarity=0.259 Sum_probs=54.2
Q ss_pred hhhccccccCCCcceEEEEeeCceeEEeeccCCChhHHHHHHhhcccCCCCceeEEEe
Q psy1114 270 LQTGMRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVS 327 (480)
Q Consensus 270 ~~~g~~ga~~kp~g~~arv~igq~~~s~~~~~~~~~~~~eal~r~k~kfpg~qki~~s 327 (480)
++|.|.+..|+|.++||||.+||+|++|.+ .|.+++.|||++|.+|+|++++|.+|
T Consensus 79 ~e~RMG~GKG~~~~wva~Vk~G~ilfEi~g--v~~~~A~eAlr~a~~KLP~~~kiv~~ 134 (135)
T 3bbo_O 79 AETRMGSGKGSPEYWVAVVKPGRILYEISG--VAENIARRAVAIAASKMPIRTQFIIS 134 (135)
T ss_dssp SSCCSSCCCSCSSCCCCCCCTTCEEEEECS--SCTTHHHHHHHHHHHHCSSCEEEECC
T ss_pred ccccccccCCCceEEEEEECCCCEEEEEec--CCHHHHHHHHHHHHhhCCCcEEEEec
Confidence 799999999999999999999999999999 89999999999999999999999875
No 25
>2pzz_A UPF0201 protein MJ1564; methanococcus jannaschii, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Methanocaldococcus jannaschii DSM2661} SCOP: d.77.1.2
Probab=33.59 E-value=20 Score=32.20 Aligned_cols=42 Identities=31% Similarity=0.424 Sum_probs=29.1
Q ss_pred ccccchhh-HHHHHhhhhhhhHhhhCCCceEEEEEeCCceEEEeeccccccccCccc
Q psy1114 397 YEQLSSEA-LEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRFE 452 (480)
Q Consensus 397 ~~QirseA-LEAARI~aNKYl~k~~Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq 452 (480)
.++|+++. |++||- +|.+....+.++ +|.||+++.+|-=++.
T Consensus 55 ~~lL~~~~ild~~r~----~L~~~i~~~~l~----------~rldKQaAy~G~v~~~ 97 (147)
T 2pzz_A 55 KELLRSQSILDAARM----VLEKGMTENATK----------FYLNKQAAYVGAVNFD 97 (147)
T ss_dssp HHHHHHTTCHHHHHH----HHHHTCCSSEEE----------EEECHHHHHTTCCCCS
T ss_pred HHHhhhhhHHHHHHH----HHHhCccCCEEE----------EEEEhHHHhCCCEEec
Confidence 45677777 787774 555544333443 5779999999988877
No 26
>3d7a_A UPF0201 protein PH1010; DUF54 family, unknown function; 1.90A {Pyrococcus horikoshii}
Probab=31.54 E-value=21 Score=31.65 Aligned_cols=44 Identities=20% Similarity=0.414 Sum_probs=29.8
Q ss_pred ccccchhh-HHHHHhhhhhhhHhhhCCCceEEEEEeCCceEEEeeccccccccCccccCC
Q psy1114 397 YEQLSSEA-LEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRFELDG 455 (480)
Q Consensus 397 ~~QirseA-LEAARI~aNKYl~k~~Gk~~fhlrvr~~PhhVlReNKMls~AGADRlq~dG 455 (480)
.++|+++. |++|| .+|.+..-.+.++ +|.||+++.+|-=++. ||
T Consensus 61 ~~~l~~~~ild~~r----~~l~~~i~~~~~~----------~rldKQaAy~G~v~~~-d~ 105 (138)
T 3d7a_A 61 YELFRGQQILDTAR----MMLEEGYFGEEII----------IKVHKQVAYVGKVNFN-ED 105 (138)
T ss_dssp HHHHHHTTCHHHHH----HHHHHTEETTEEE----------EEEEHHHHHTTCCCCC-SC
T ss_pred HHHhhhhHHHHHHH----HHHHhCccCCEEE----------EEEEhHHHhCCCEEec-CC
Confidence 35677777 67777 5555543223443 5779999999988877 77
No 27
>2kvt_A Uncharacterized protein YAIA; structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, NESG; NMR {Escherichia coli}
Probab=31.01 E-value=21 Score=28.89 Aligned_cols=49 Identities=29% Similarity=0.594 Sum_probs=36.5
Q ss_pred CCCCCCCcccc----cCCCCCceEEEeCCCCCCCCCCCceeEEEeeccccccchhHHHHHH
Q psy1114 80 KNKPYPKSRFC----RGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGR 136 (480)
Q Consensus 80 k~kpY~rs~y~----rGvP~~KI~~fD~G~kka~v~efp~~v~Lvs~E~~qIss~ALEAAR 136 (480)
.+|||||.-+| +|.|+..|+-|.+- | |+|--=.|+|+-.. -.|||.|-+
T Consensus 3 ~rPpYPReA~iV~veKG~~g~~vtwyeLR---A---Dhp~PnsLISEH~t--eqEA~DAK~ 55 (71)
T 2kvt_A 3 TKPPYPREAYIVTIEKGKPGQTVTWYQLR---A---DHPKPDSLISEHPT--AQEAMDAKK 55 (71)
T ss_dssp CCCSSCCCEEEEEEEEECSSSEEEEEEEE---E---SSSCTTEEEEEESS--HHHHHHHHH
T ss_pred CCCCCCcceEEEEeecCCCCceEEEEEee---c---CCCCCCcccccCcc--HHHHhhhHh
Confidence 46899998887 79999999999884 4 68887788886431 245666643
No 28
>2kvt_A Uncharacterized protein YAIA; structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, NESG; NMR {Escherichia coli}
Probab=25.65 E-value=16 Score=29.46 Aligned_cols=49 Identities=29% Similarity=0.594 Sum_probs=35.6
Q ss_pred cCCCCCCCCCc----CCCCCCceeEEeCCCCCCCCCCCCeEEEEecccccccchhhHHHHH
Q psy1114 353 KNKPYPKSRFC----RGVPDPKIRIFDLGKKKAKVEDFPLCVHLVSDEYEQLSSEALEAGR 409 (480)
Q Consensus 353 k~kpY~r~~y~----rGVP~~KI~~fdmG~kka~~~efp~~v~Lvs~E~~QirseALEAAR 409 (480)
..|||||.-+| +|.|+..|+-|.+- | |+|--=+|+|+-.- -.|||.|-+
T Consensus 3 ~rPpYPReA~iV~veKG~~g~~vtwyeLR---A---Dhp~PnsLISEH~t--eqEA~DAK~ 55 (71)
T 2kvt_A 3 TKPPYPREAYIVTIEKGKPGQTVTWYQLR---A---DHPKPDSLISEHPT--AQEAMDAKK 55 (71)
T ss_dssp CCCSSCCCEEEEEEEEECSSSEEEEEEEE---E---SSSCTTEEEEEESS--HHHHHHHHH
T ss_pred CCCCCCcceEEEEeecCCCCceEEEEEee---c---CCCCCCcccccCcc--HHHHhhhHh
Confidence 46999998887 79999999999885 3 56655677776322 136777643
No 29
>1r45_A Exoenzyme C3, mono-ADP-ribosyltransferase C3; binary toxin, C3 exoenzyme; 1.57A {Clostridium phage c-st} SCOP: d.166.1.1 PDB: 1r4b_A
Probab=25.51 E-value=1.3e+02 Score=27.35 Aligned_cols=101 Identities=10% Similarity=0.178 Sum_probs=58.1
Q ss_pred HHHHHHHHHHcccCCCCceEEEEeCCcccc---------------ccChHHHHHHH--hcCcee-ecCceeEeehhhhhc
Q psy1114 212 KPAVIEALRRAKFKFPGRQKIYVSKKWGFT---------------KYDREEYETLR--DQNRIL-HDAHFDHWIIRLQTG 273 (480)
Q Consensus 212 ~~~AkEALrrA~~KlP~~~kIvis~~wgfT---------------~~~~~e~~~~~--~~~~l~-~dG~~vk~iDR~~~g 273 (480)
....++.|..|-.|+|.+..|++-++-+.. .++++.+.++. -.|.++ .+|.--.-++.
T Consensus 64 ~~~~I~~ld~al~k~~~~~~i~vYRg~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~~~~~~~F~STSl~~---- 139 (204)
T 1r45_A 64 ILQKVKLIDQSFSKMKMPQNIILFRGDDPAYLGPEFQDKILNKDGTINKTVFEQVKAKFLKKDRTEYGYISTSLMS---- 139 (204)
T ss_dssp HHHHHHHHHHHTTTCBCSSCEEEEEEECGGGGCHHHHTTSBCTTSSBCHHHHHHHHHHHTTSEECCSSCEEEESCC----
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEECCcchhccchhhcccccccccccHHHHHHHHHhcCCCEEeecCceeccCCh----
Confidence 345567888888888887777776554332 45666666664 245554 44433333333
Q ss_pred cccccCCCcceEEEEeeCceeEEeeccCCChhHHHHHHhhcccCCCCceeEEEeccccc
Q psy1114 274 MRGAYGKPQGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVSKKWGF 332 (480)
Q Consensus 274 ~~ga~~kp~g~~arv~igq~~~s~~~~~~~~~~~~eal~r~k~kfpg~qki~~s~kwgf 332 (480)
.+|+. ..+++.|.+...-....|+.+- .|||.+.|.+-+.-.|
T Consensus 140 --~~f~~----------~~i~~~I~vpkG~~g~~i~~~S----~~~~E~EvLlprgt~f 182 (204)
T 1r45_A 140 --AQFGG----------RPIVTKFKVTNGSKGGYIDPIS----YFPGQLEVLLPRNNSY 182 (204)
T ss_dssp --GGGTT----------SSEEEEEEECTTCBCEECGGGC----SSTTSCEEEECSSCCE
T ss_pred --hhccC----------CCeEEEEEeCCCCceEeecccC----CCCCceEEEECCCCEE
Confidence 46652 2356666655544444444432 4788888887765444
No 30
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=23.86 E-value=84 Score=26.11 Aligned_cols=61 Identities=23% Similarity=0.159 Sum_probs=40.8
Q ss_pred EEecCCCHHHHHHHHHHcccCCCCceEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehhhh
Q psy1114 205 VRSSDKFKPAVIEALRRAKFKFPGRQKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIRLQ 271 (480)
Q Consensus 205 v~~k~~~~~~AkEALrrA~~KlP~~~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR~~ 271 (480)
|.+.+|+.+.=+++|+..... +|+....-|.+..+|.+|.+|.+.-+-- |-.-|.-+|||-
T Consensus 8 vSt~~Qsl~~Q~~~l~~~~~~-----~i~~d~~Sg~~~~~Rp~l~~ll~~~~~g-d~lvv~~ldRl~ 68 (124)
T 3pkz_A 8 VSSLDQNLERQLENLKTFGAE-----KIFTEKQSGKSIENRPILQKALNFVEMG-DRFIVESIDRLG 68 (124)
T ss_dssp ESSTTSCHHHHHHHHHHTTCS-----EEEEEESCSSCSTTCHHHHHHHHHCCTT-CEEEESSHHHHC
T ss_pred eCCCcCCHHHHHHHHHHhCCc-----eEEEEcccCCChhcCHHHHHHHHHHHCC-CEEEEeeccccc
Confidence 445567888888899887654 7777765576558999999998753210 223445556663
No 31
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=21.18 E-value=3.5e+02 Score=22.33 Aligned_cols=92 Identities=20% Similarity=0.155 Sum_probs=54.3
Q ss_pred EEEEecCCCHHHHHHHHHHcccCCCCceEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehhhhhccccccCCCc
Q psy1114 203 MSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIRLQTGMRGAYGKPQ 282 (480)
Q Consensus 203 fsv~~k~~~~~~AkEALrrA~~KlP~~~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR~~~g~~ga~~kp~ 282 (480)
+++-..+...+.+++||..+.+ ++-|-+ -..+.|-.+-..+.|. |.. + .
T Consensus 4 I~aII~~~~~~~V~~aL~~~G~--~g~Tv~-~v~G~G~~~~~~~~~~-----------G~~--~-------------~-- 52 (116)
T 1vfj_A 4 IVAIVRPEKLNEVLKALFQAEV--RGLTLS-RVQGHGGETERVETYR-----------GTT--V-------------K-- 52 (116)
T ss_dssp EEEEECGGGHHHHHHHHHHTTC--CCCEEE-EEEEECTTCCCHHHHT-----------TSC--C-------------S--
T ss_pred EEEEECHHHHHHHHHHHHhCCC--CeEEEE-eeEeEcCccCCcccee-----------cee--e-------------e--
Confidence 3444557889999999999965 454444 3344443222222221 000 0 0
Q ss_pred ceEEEEeeCceeEEeeccCCChhHHHHHHhh-cccCCCCceeEEEecc
Q psy1114 283 GTVARVNIGQPIMSVRSSDKFKPAVIEALRR-AKFKFPGRQKIYVSKK 329 (480)
Q Consensus 283 g~~arv~igq~~~s~~~~~~~~~~~~eal~r-~k~kfpg~qki~~s~k 329 (480)
+- .+-.+.+.+-..+...+.|++|++. ++.--||.-||+|+.-
T Consensus 53 --~~--~~~k~~ieivv~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (116)
T 1vfj_A 53 --ME--LHEKVRLEIGVSEPFVKPTVEAILKAARTGEVGDGKIFVLPV 96 (116)
T ss_dssp --TT--CEEEEEEEEEECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred --ec--cCceEEEEEEEcHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 00 1123344555567799999999997 5566789999999853
No 32
>1cz6_A Protein (androctonin); peptide, beta sheet, toxin; NMR {Androctonus australis} SCOP: j.3.1.3
Probab=21.08 E-value=32 Score=22.78 Aligned_cols=18 Identities=33% Similarity=0.685 Sum_probs=14.8
Q ss_pred ccccccccccccCCCCCC
Q psy1114 68 ETLRDQNSYRYCKNKPYP 85 (480)
Q Consensus 68 M~rrParcYR~~k~kpY~ 85 (480)
+-||-+-||-.|.|.||.
T Consensus 9 icrrrggcyykctnrpy~ 26 (26)
T 1cz6_A 9 ICRRRGGCYYKCTNRPYX 26 (26)
T ss_dssp ECCSSSCCEEEECCCCC-
T ss_pred HHHhcCceEEEccCCCCC
Confidence 457888999999999994
No 33
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=20.43 E-value=3.6e+02 Score=22.12 Aligned_cols=91 Identities=18% Similarity=0.099 Sum_probs=0.0
Q ss_pred EEEEEecCCCHHHHHHHHHHcccCCCCceEEEEeCCccccccChHHHHHHHhcCceeecCceeEeehhhhhccccccCCC
Q psy1114 202 IMSVRSSDKFKPAVIEALRRAKFKFPGRQKIYVSKKWGFTKYDREEYETLRDQNRILHDAHFDHWIIRLQTGMRGAYGKP 281 (480)
Q Consensus 202 Ifsv~~k~~~~~~AkEALrrA~~KlP~~~kIvis~~wgfT~~~~~e~~~~~~~~~l~~dG~~vk~iDR~~~g~~ga~~kp 281 (480)
++++-..+...+.+++||..+.+. -..+.-..+.|-.+=..+.|....-+-.++|.
T Consensus 3 ~I~aII~~~~~~~v~~aL~~~G~~---g~Tv~~v~G~G~~~~~~~~~~G~~~~~~~~~k--------------------- 58 (112)
T 2eg2_A 3 KIEAIIKPFKLDEVKDALVEIGIG---GMTVTEVKGFGQQKGHTEIYRGTEYVIDFLPK--------------------- 58 (112)
T ss_dssp EEEEEECGGGHHHHHHHHHHTTCC---CCEEEEEEEC-----------------CCEEE---------------------
T ss_pred EEEEEECHHHHHHHHHHHHHCCCC---eEEEEEeEeecccCCCceeeeccccccccccE---------------------
Q ss_pred cceEEEEeeCceeEEeeccCCChhHHHHHHhhcccC-CCCceeEEEe
Q psy1114 282 QGTVARVNIGQPIMSVRSSDKFKPAVIEALRRAKFK-FPGRQKIYVS 327 (480)
Q Consensus 282 ~g~~arv~igq~~~s~~~~~~~~~~~~eal~r~k~k-fpg~qki~~s 327 (480)
+.+.|-..+...+.|+++++.+-.. -||.=||+|+
T Consensus 59 -----------~~ieivv~d~~v~~vv~~I~~~~~tg~~GdGkiFV~ 94 (112)
T 2eg2_A 59 -----------VKIEVVVRDEDVEKVVETIVKTAQTGRVGDGKIFII 94 (112)
T ss_dssp -----------EEEEEEECGGGHHHHHHHHHHHHCCSSTTCCEEEEE
T ss_pred -----------EEEEEEEcHHHHHHHHHHHHHHhcCCCCCCEEEEEE
Done!