BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11141
         (566 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q99JF5|MVD1_MOUSE Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2
          Length = 401

 Score =  296 bits (759), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 42/368 (11%)

Query: 115 RMHAKTSVALSPDFTEDKLWLNGK-----------------KLAEQEKSSRE------MA 151
           ++   T+VA+S DFTED++WLNG+                 +LA + +S+ +        
Sbjct: 48  QLKTTTTVAISKDFTEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLSL 107

Query: 152 DWKMHICSENNFPTAAGLASSAAGYSCLVFTLAYALGLNTSEVSHIARQGSGSACRSMFG 211
            +K+H+ S NNFPTAAGLASSAAGY+CL +TLA   G+   ++S +AR+GSGSACRS++G
Sbjct: 108 SYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGVE-GDLSEVARRGSGSACRSLYG 166

Query: 212 GFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKSTSSTD 271
           GFV W+    G+Q+DG   I R         QI  E +W  +R++ILVV+   K T ST 
Sbjct: 167 GFVEWQM---GEQADGKDSIAR---------QIAPEWHWPQLRILILVVSADKKQTGSTV 214

Query: 272 GMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCLDTYPP 331
           GMQ +  TSTL + R  ++VP R   M   ++ +DF  FA+LTMKDSNQFHA CLDT+PP
Sbjct: 215 GMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPP 274

Query: 332 IVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPS 391
           I Y+NDTS  I++ VH FNT  G+TKVAYTFDAGPNA ++ LE+TV   ++ +   FPP+
Sbjct: 275 ISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSFPPA 334

Query: 392 SGISAPYIRGLEYLNILPPVQLP---SFTPQPAGLLQYLISTKIGSGPKILDDIPNNHLL 448
           +     +++GL+   +L   +L    +  P P G +QY+I+T++G GP++LDD  ++HLL
Sbjct: 335 AN-GDKFLKGLQVAPVLLSDELKAALAVEPSPGG-VQYIIATQVGPGPQVLDDT-HDHLL 391

Query: 449 NEAGAPKH 456
            + G P+ 
Sbjct: 392 GQDGLPQR 399



 Score = 66.2 bits (160), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 13/81 (16%)

Query: 457 LMFTLAYALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFEL 516
           L +TLA   G+   ++S +AR+GSGSACRS++GGFV W+    G+Q++G   I R     
Sbjct: 135 LAYTLAQVYGVE-GDLSEVARRGSGSACRSLYGGFVEWQM---GEQADGKDSIAR----- 185

Query: 517 SNAEQIISESYWGSMRVIILV 537
               QI  E +W  +R++ILV
Sbjct: 186 ----QIAPEWHWPQLRILILV 202



 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 33  EVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLEYLNIL 84
           +VAYTFDAGPNA ++ LE+TV   ++ +   FPP++     +++GL+   +L
Sbjct: 300 KVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSFPPAAN-GDKFLKGLQVAPVL 350


>sp|Q5U403|MVD1_DANRE Diphosphomevalonate decarboxylase OS=Danio rerio GN=mvd PE=2 SV=1
          Length = 400

 Score =  296 bits (757), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 174/378 (46%), Positives = 233/378 (61%), Gaps = 53/378 (14%)

Query: 109 IEITFQRMHAKTS--VALSPDFTEDKLWLNGK-----------------KLAEQEKSSRE 149
           + +T  + H +T+  +A S  F +D +WLNGK                 +LA++ K++ +
Sbjct: 41  LSVTLHQDHLRTTTTIACSRSFHKDCIWLNGKEQDISHPRLQSCLLEIRRLAQRRKNTGD 100

Query: 150 MAD---WKMHICSENNFPTAAGLASSAAGYSCLVFTLAYALGLNTSEVSHIARQGSGSAC 206
            A     K+HICS NNFPTAAGLASSAAGY+CLV+TL+    +   E+S +ARQGSGSAC
Sbjct: 101 PASDVSNKVHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNVE-GELSGVARQGSGSAC 159

Query: 207 RSMFGGFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKS 266
           RS++GGFV+WK    G+QSDG   I         AEQ+ SE YW  +RV+ILVV+ + KS
Sbjct: 160 RSLYGGFVQWKL---GEQSDGKDSI---------AEQVASELYWPELRVLILVVSAEQKS 207

Query: 267 TSSTDGMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCL 326
             ST GM  +  TS L ++R + +VP R   M  A+R RDFP+F ELTMKDSNQFHA CL
Sbjct: 208 VGSTSGMHTSVETSHLLKYRADAVVPGRMEEMIRAIRLRDFPKFGELTMKDSNQFHAICL 267

Query: 327 DTYPPIVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQ 386
           DTYPPI Y+N+ SH I+  VH +N   GET+VAYTFDAGPNA +Y L++ +P  +  +  
Sbjct: 268 DTYPPIFYLNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVRH 327

Query: 387 YFPPSSGISAPYIRGLEYLNILP--PVQLP-------SFTPQPAGLLQYLISTKIGSGPK 437
           +FPP        +   E+   LP  P  L        +  P P G ++Y+ISTK G GP+
Sbjct: 328 FFPPE-------VNEEEFFKGLPVCPADLSEEMIRDINMKPTPNG-IRYMISTKAGPGPR 379

Query: 438 ILDDIPNNHLLNEAGAPK 455
           +++D PN HLL   G PK
Sbjct: 380 VVED-PNLHLLGADGLPK 396



 Score = 72.8 bits (177), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 13/81 (16%)

Query: 457 LMFTLAYALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFEL 516
           L++TL+    +   E+S +ARQGSGSACRS++GGFV+WK    G+QS+G   I       
Sbjct: 133 LVYTLSQLFNVE-GELSGVARQGSGSACRSLYGGFVQWKL---GEQSDGKDSI------- 181

Query: 517 SNAEQIISESYWGSMRVIILV 537
             AEQ+ SE YW  +RV+ILV
Sbjct: 182 --AEQVASELYWPELRVLILV 200



 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 29  KYYIE--VAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLEYLNILPP 86
           +YY E  VAYTFDAGPNA +Y L++ +P  +  +  +FPP        +   E+   LP 
Sbjct: 292 QYYGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVRHFFPPE-------VNEEEFFKGLPV 344

Query: 87  VQVKLSNNDI--ITLKSELNGI 106
               LS   I  I +K   NGI
Sbjct: 345 CPADLSEEMIRDINMKPTPNGI 366


>sp|Q62967|MVD1_RAT Diphosphomevalonate decarboxylase OS=Rattus norvegicus GN=Mvd PE=2
           SV=1
          Length = 401

 Score =  293 bits (751), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/367 (44%), Positives = 234/367 (63%), Gaps = 42/367 (11%)

Query: 115 RMHAKTSVALSPDFTEDKLWLNGK-----------------KLAEQEKSSRE------MA 151
           ++   T+ A+S DFTED++WLNG+                 +LA + +S+ +        
Sbjct: 48  QLKTTTTAAISKDFTEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTGDGDALPLSL 107

Query: 152 DWKMHICSENNFPTAAGLASSAAGYSCLVFTLAYALGLNTSEVSHIARQGSGSACRSMFG 211
            +K+H+ S NNFPTAAGLASSAAGY+CL +TLA   G+   ++S +AR+GSGSACRS++G
Sbjct: 108 GYKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVE-GDLSEVARRGSGSACRSLYG 166

Query: 212 GFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKSTSSTD 271
           GFV W+    G+Q+DG   I R         QI  E +W  +RV+ILVV+ + K T ST 
Sbjct: 167 GFVEWQM---GEQADGKDSIAR---------QIAPEWHWPQLRVLILVVSAEKKPTGSTV 214

Query: 272 GMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCLDTYPP 331
           GMQ +  TSTL + R  +IVP R   M   ++ +DF  FA+LTMKDSNQFHA CLDT+PP
Sbjct: 215 GMQTSVATSTLLKFRAESIVPERMKEMTRCIQEQDFQAFAQLTMKDSNQFHATCLDTFPP 274

Query: 332 IVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPS 391
           I Y+NDTS  I++ VH FN   G+TKVAYTFDAGPNA ++ LE+TV   ++ +   FPP+
Sbjct: 275 ISYLNDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSFPPA 334

Query: 392 SGISAPYIRGLEYLNILPPVQLPS---FTPQPAGLLQYLISTKIGSGPKILDDIPNNHLL 448
           +     +++GL+   +L   +L +     P P G +QY+I+T++G GP++LDD P++HLL
Sbjct: 335 AN-GDKFLKGLQVAPVLLSDELKTSLATEPSPGG-VQYIIATQVGPGPQVLDD-PHHHLL 391

Query: 449 NEAGAPK 455
              G P+
Sbjct: 392 GPDGLPQ 398



 Score = 66.6 bits (161), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 13/81 (16%)

Query: 457 LMFTLAYALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFEL 516
           L +TLA   G+   ++S +AR+GSGSACRS++GGFV W+    G+Q++G   I R     
Sbjct: 135 LAYTLARVYGVE-GDLSEVARRGSGSACRSLYGGFVEWQM---GEQADGKDSIAR----- 185

Query: 517 SNAEQIISESYWGSMRVIILV 537
               QI  E +W  +RV+ILV
Sbjct: 186 ----QIAPEWHWPQLRVLILV 202



 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 33  EVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLEYLNILPPVQVKLS 92
           +VAYTFDAGPNA ++ LE+TV   ++ +   FPP++     +++GL+   +L   ++K S
Sbjct: 300 KVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSFPPAAN-GDKFLKGLQVAPVLLSDELKTS 358


>sp|P53602|MVD1_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1
          Length = 400

 Score =  283 bits (724), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 227/368 (61%), Gaps = 42/368 (11%)

Query: 114 QRMHAKTSVALSPDFTEDKLWLNGKK-----------------LAEQEKSSRE------M 150
            ++   T+  +S DFTED++WLNG++                 LA + ++SR+       
Sbjct: 46  DQLKTTTTAVISKDFTEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSS 105

Query: 151 ADWKMHICSENNFPTAAGLASSAAGYSCLVFTLAYALGLNTSEVSHIARQGSGSACRSMF 210
              K+H+ S NNFPTAAGLASSAAGY+CL +TLA   G+  S++S +AR+GSGSACRS++
Sbjct: 106 LSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVE-SDLSEVARRGSGSACRSLY 164

Query: 211 GGFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKSTSST 270
           GGFV W+    G+Q+DG   I R         Q+  ES+W  +RV+ILVV+ + K T ST
Sbjct: 165 GGFVEWQM---GEQADGKDSIAR---------QVAPESHWPELRVLILVVSAEKKLTGST 212

Query: 271 DGMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCLDTYP 330
            GM+ +  TS L   R  ++VP+R + M   +R RDFP FA+LTMKDSNQFHA CLDT+P
Sbjct: 213 VGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQFHATCLDTFP 272

Query: 331 PIVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPP 390
           PI Y+N  S  I+  VH FN   G+TKVAYTFDAGPNA ++ L++TV   ++ +   FPP
Sbjct: 273 PISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPP 332

Query: 391 SSGISAPYIRGLEYLNILPPVQLP---SFTPQPAGLLQYLISTKIGSGPKILDDIPNNHL 447
            S     +++GL+        +L    +  P P G ++Y+I T++G GP+ILDD P  HL
Sbjct: 333 GSNGDT-FLKGLQVRPAPLSAELQAALAMEPTPGG-VKYIIVTQVGPGPQILDD-PCAHL 389

Query: 448 LNEAGAPK 455
           L   G PK
Sbjct: 390 LGPDGLPK 397



 Score = 70.5 bits (171), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 13/81 (16%)

Query: 457 LMFTLAYALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFEL 516
           L +TLA   G+  S++S +AR+GSGSACRS++GGFV W+    G+Q++G   I R     
Sbjct: 134 LAYTLARVYGVE-SDLSEVARRGSGSACRSLYGGFVEWQM---GEQADGKDSIAR----- 184

Query: 517 SNAEQIISESYWGSMRVIILV 537
               Q+  ES+W  +RV+ILV
Sbjct: 185 ----QVAPESHWPELRVLILV 201



 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 33  EVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLE 79
           +VAYTFDAGPNA ++ L++TV   ++ +   FPP S     +++GL+
Sbjct: 299 KVAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDT-FLKGLQ 344


>sp|Q54YQ9|MVD1_DICDI Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum
           GN=mvd PE=3 SV=1
          Length = 391

 Score =  282 bits (722), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 164/389 (42%), Positives = 228/389 (58%), Gaps = 41/389 (10%)

Query: 90  KLSNNDIITLKSELNGIEPIEITFQRMHAKTSVALSPDFTEDKLWLNGKK---------- 139
           K   N I+ L S L+G     +    +   T++  S D+TED+L+LNGKK          
Sbjct: 22  KRDENIILPLNSSLSGT----LHQDDLKTTTTIVASEDYTEDELYLNGKKEDINAVRYQN 77

Query: 140 -LAEQEKSSREMADWK--MHICSENNFPTAAGLASSAAGYSCLVFTLAYALGLNTSEVSH 196
            L      + ++ D K  +HI S NNFPTAAGLASSA+GY CLVFTLA   G++  ++S 
Sbjct: 78  VLKMIRSRATKLMDKKHCVHIASINNFPTAAGLASSASGYCCLVFTLAQMYGVD-GDISG 136

Query: 197 IARQGSGSACRSMFGGFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVI 256
           IAR GSGSACRSM+GGFV+W+    G + DG+  I         A Q+  ES+W  M +I
Sbjct: 137 IARLGSGSACRSMYGGFVKWEM---GTKDDGSDSI---------AVQVQPESHWPDMNII 184

Query: 257 ILVVNDQAKSTSSTDGMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMK 316
           +LVVND+ K TSSTDGMQ++  TS + + R    VP+R   +EEA+  +DF  F ++TMK
Sbjct: 185 VLVVNDKKKETSSTDGMQKSAATSVMMKERCAVTVPNRMRDIEEAINKKDFQTFGDITMK 244

Query: 317 DSNQFHACCLDTYPPIVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENT 376
           DS+ FH  C  T PPI Y+NDTS  I+  +H +N + G  K AYTFDAGPNAC+Y+   +
Sbjct: 245 DSDDFHEVCATTTPPIYYLNDTSRYIMNLIHRYNKLSGSIKCAYTFDAGPNACIYLPAES 304

Query: 377 VPLLLSTLVQYFPPSSGISAPYIRGLE-----YLNILPPVQLPS-FTPQPAGL--LQYLI 428
              +LS  +++FP        Y RG +       N +P  +L S +TP    +  L+Y++
Sbjct: 305 TTEVLSLFMKHFPGDD--MQTYYRGPKENIPSIENFVPSEKLASLYTPDTTFVNSLKYIL 362

Query: 429 STKIGSGPKILDDIPNNHLLNEAGAPKHL 457
            TK+G GP+IL +   + + N  G PK L
Sbjct: 363 HTKVGPGPQILSE-SESLIDNTTGLPKQL 390



 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 13/81 (16%)

Query: 457 LMFTLAYALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFEL 516
           L+FTLA   G++  ++S IAR GSGSACRSM+GGFV+W+    G + +G+  I       
Sbjct: 120 LVFTLAQMYGVD-GDISGIARLGSGSACRSMYGGFVKWEM---GTKDDGSDSI------- 168

Query: 517 SNAEQIISESYWGSMRVIILV 537
             A Q+  ES+W  M +I+LV
Sbjct: 169 --AVQVQPESHWPDMNIIVLV 187



 Score = 43.1 bits (100), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)

Query: 32  IEVAYTFDAGPNACLYVLENTVPLLLSTLVQYFP 65
           I+ AYTFDAGPNAC+Y+   +   +LS  +++FP
Sbjct: 284 IKCAYTFDAGPNACIYLPAESTTEVLSLFMKHFP 317


>sp|Q0P570|MVD1_BOVIN Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1
          Length = 400

 Score =  281 bits (718), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 161/368 (43%), Positives = 228/368 (61%), Gaps = 42/368 (11%)

Query: 114 QRMHAKTSVALSPDFTEDKLWLNGK-----------------KLAEQEKSSRE------M 150
            ++   T+ A+S DFTED++WLNG+                 +LA + +S          
Sbjct: 46  DQLKTTTTAAISRDFTEDRIWLNGREEDMGHPRLQACLREIRRLARKRRSDGHEDPLPLS 105

Query: 151 ADWKMHICSENNFPTAAGLASSAAGYSCLVFTLAYALGLNTSEVSHIARQGSGSACRSMF 210
             +K+H+ SENNFPTAAGLASSAAGY+CL +TLA   G++ S++S +AR+GSGSACRS++
Sbjct: 106 LSYKVHVASENNFPTAAGLASSAAGYACLAYTLARVYGVD-SDLSEVARRGSGSACRSLY 164

Query: 211 GGFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKSTSST 270
           GGFV W+    G++ DG   +         A Q+  ES+W  +RV+ILVV+ + K   ST
Sbjct: 165 GGFVEWQM---GERPDGKDSV---------ACQVAPESHWPELRVLILVVSAERKPMGST 212

Query: 271 DGMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCLDTYP 330
            GMQ +  TS L + R   +VP R + M   +R R+F  F +LTMKDSNQFHA CLDT+P
Sbjct: 213 AGMQTSVETSALLKFRAEALVPPRMAEMTRCIRERNFQAFGQLTMKDSNQFHATCLDTFP 272

Query: 331 PIVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPP 390
           PI Y++DTS  I++ VH FN   G+TKVAYTFDAGPNA ++ L++TV   ++ +   FPP
Sbjct: 273 PISYLSDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVVFTLDDTVAEFVAAVRHSFPP 332

Query: 391 SSGISAPYIRGLEYLNILPPVQLPS---FTPQPAGLLQYLISTKIGSGPKILDDIPNNHL 447
            S     +++GL    +L   +L +     P P G ++Y+I+T++G GP++LDD P  HL
Sbjct: 333 ESN-GDKFLKGLPVEPVLLSDELKAVLGMDPVP-GSIRYIIATQVGPGPQVLDD-PGAHL 389

Query: 448 LNEAGAPK 455
           L   G PK
Sbjct: 390 LGPDGLPK 397



 Score = 66.2 bits (160), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 13/81 (16%)

Query: 457 LMFTLAYALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFEL 516
           L +TLA   G++ S++S +AR+GSGSACRS++GGFV W+    G++ +G   +       
Sbjct: 134 LAYTLARVYGVD-SDLSEVARRGSGSACRSLYGGFVEWQM---GERPDGKDSV------- 182

Query: 517 SNAEQIISESYWGSMRVIILV 537
             A Q+  ES+W  +RV+ILV
Sbjct: 183 --ACQVAPESHWPELRVLILV 201



 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 13/99 (13%)

Query: 33  EVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLEYLNILPPVQVKLS 92
           +VAYTFDAGPNA ++ L++TV   ++ +   FPP S        G ++L  LP   V LS
Sbjct: 299 KVAYTFDAGPNAVVFTLDDTVAEFVAAVRHSFPPESN-------GDKFLKGLPVEPVLLS 351

Query: 93  NNDIITLKSELNGIEPIEITFQRMHAKTSVALSPDFTED 131
           +     LK+ L G++P+  + + + A T V   P   +D
Sbjct: 352 DE----LKAVL-GMDPVPGSIRYIIA-TQVGPGPQVLDD 384


>sp|Q6BY07|MVD1_DEBHA Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii (strain
           ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
           GN=MVD1 PE=3 SV=2
          Length = 388

 Score =  248 bits (634), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 158/394 (40%), Positives = 219/394 (55%), Gaps = 65/394 (16%)

Query: 87  VQVKLSNNDIITLKSELNGIEPIEITFQRMHAKTSVALSPDFTEDKLWLNGK-KLAEQEK 145
           + V LS ND+ TL                    TSVA S DF EDKLWLNGK +  E E+
Sbjct: 35  ISVTLSQNDLRTL--------------------TSVAASEDFKEDKLWLNGKLESLESER 74

Query: 146 SSREMADWK--------------------MHICSENNFPTAAGLASSAAGYSCLVFTLA- 184
           +   +AD +                    +HI SENNFPTAAGLASSAAG++ LV ++A 
Sbjct: 75  TKACLADLRTLRKELESNDSSIPKLSQFGVHIVSENNFPTAAGLASSAAGFAALVVSIAK 134

Query: 185 -YALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQ 243
            Y L  N SE+S IAR+GSGSACRS+FGG+V W+    GQ+++G         E S A +
Sbjct: 135 LYELPQNMSEISKIARKGSGSACRSLFGGYVAWEM---GQETNG---------EDSKAVE 182

Query: 244 IISESYWGSMRVIILVVNDQAKSTSSTDGMQRTTLTSTLYEHRVNTIVPSRCSGMEEALR 303
           +   S+W +M+  ILVV+D  K T ST GMQ T  TS L++ R+  +VP R   M++++ 
Sbjct: 183 VAPLSHWPNMKAAILVVSDDKKDTPSTSGMQTTVATSDLFQWRIKEVVPKRFDDMKDSIL 242

Query: 304 ARDFPRFAELTMKDSNQFHACCLDTYPPIVYMNDTSHSIVRFVHEFNTVVGETKVAYTFD 363
            +DF  F +LTMKDSN FHA CLD+ PPI Y+NDTS  I++ +HE N   G+   AYTFD
Sbjct: 243 RKDFATFGDLTMKDSNSFHAVCLDSTPPIFYLNDTSKKIIKLIHELNKREGKIIAAYTFD 302

Query: 364 AGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLEYLNILPPVQLPSFTPQPAGL 423
           AGPNA +Y  +     +L  + +YF   SG      + L+  + +         P+    
Sbjct: 303 AGPNAVIYYEQENESKVLGVIYKYFSKVSGWEKLDTKTLDTTSDIQA------DPELYKG 356

Query: 424 LQYLISTKIGSGPKILDDIPNNHLLNEAGAPKHL 457
           +  +I T++G GP+      +  L+N+ G PK +
Sbjct: 357 VSKIILTEVGQGPQ----GSSESLINDKGLPKAV 386



 Score = 63.2 bits (152), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 12/75 (16%)

Query: 463 YALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFELSNAEQI 522
           Y L  N SE+S IAR+GSGSACRS+FGG+V W+    GQ++ G         E S A ++
Sbjct: 136 YELPQNMSEISKIARKGSGSACRSLFGGYVAWEM---GQETNG---------EDSKAVEV 183

Query: 523 ISESYWGSMRVIILV 537
              S+W +M+  ILV
Sbjct: 184 APLSHWPNMKAAILV 198



 Score = 38.9 bits (89), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 22  KLNKESKKYYIEVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSG 69
           +LNK   K  I  AYTFDAGPNA +Y  +     +L  + +YF   SG
Sbjct: 287 ELNKREGK--IIAAYTFDAGPNAVIYYEQENESKVLGVIYKYFSKVSG 332


>sp|Q751D8|MVD1_ASHGO Diphosphomevalonate decarboxylase OS=Ashbya gossypii (strain ATCC
           10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MVD1
           PE=3 SV=2
          Length = 397

 Score =  244 bits (623), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/371 (42%), Positives = 198/371 (53%), Gaps = 64/371 (17%)

Query: 46  LYVLENTVPLLLSTLVQYFPPSSGISAPYIRGLEYLNILPPVQVKLSNNDIITLKSELNG 105
           +YV   T P+ ++TL  +    S ++ P             + V LS  D+ TL      
Sbjct: 3   IYVASTTAPVNIATLKYWGKRDSMLNLP---------TNSSISVTLSQEDLRTL------ 47

Query: 106 IEPIEITFQRMHAKTSVALSPDFTEDKLWLNGK---------------------KLAEQE 144
                         TS A  P+  ED+LWLNGK                      L  +E
Sbjct: 48  --------------TSAATGPELAEDRLWLNGKPESLGNARTQQCLADLRALRRALETEE 93

Query: 145 KSSREMADWKMHICSENNFPTAAGLASSAAGYSCLVFTLA--YALGLNTSEVSHIARQGS 202
                M++WK+HI SENNFPTAAGLASSAAG++ LV  +A  Y L  + SE+S IAR+GS
Sbjct: 94  PDLPRMSEWKLHIVSENNFPTAAGLASSAAGFAALVVAVAKLYGLPQDYSEISKIARKGS 153

Query: 203 GSACRSMFGGFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVND 262
           GSACRS++GG+V W+    G ++DG+          S A QI    +W  MR  ILVV+ 
Sbjct: 154 GSACRSLYGGYVAWEM---GAEADGSD---------SRAVQIADVEHWPEMRAAILVVSA 201

Query: 263 QAKSTSSTDGMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFH 322
             K T ST GMQ+T  TS L++ RV T+VP R   M  A+RARDF  FA LTM+DSN FH
Sbjct: 202 DRKDTPSTSGMQQTVHTSDLFKERVATVVPRRYGEMAAAIRARDFATFARLTMQDSNSFH 261

Query: 323 ACCLDTYPPIVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLS 382
           A CLD++PPI YMNDTS  IV+  H  N    ET VAYTFDAGPNA LY L      L  
Sbjct: 262 ATCLDSFPPIFYMNDTSRRIVKLCHLINEFYNETIVAYTFDAGPNAVLYYLAENEARLCG 321

Query: 383 TLVQYFPPSSG 393
            L   F  + G
Sbjct: 322 FLSAVFGANDG 332



 Score = 59.7 bits (143), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 12/75 (16%)

Query: 463 YALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFELSNAEQI 522
           Y L  + SE+S IAR+GSGSACRS++GG+V W+    G +++G+          S A QI
Sbjct: 136 YGLPQDYSEISKIARKGSGSACRSLYGGYVAWEM---GAEADGSD---------SRAVQI 183

Query: 523 ISESYWGSMRVIILV 537
               +W  MR  ILV
Sbjct: 184 ADVEHWPEMRAAILV 198



 Score = 35.0 bits (79), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 29  KYYIE--VAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSG 69
           ++Y E  VAYTFDAGPNA LY L      L   L   F  + G
Sbjct: 290 EFYNETIVAYTFDAGPNAVLYYLAENEARLCGFLSAVFGANDG 332


>sp|P32377|MVD1_YEAST Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=MVD1 PE=1 SV=2
          Length = 396

 Score =  237 bits (605), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/347 (42%), Positives = 196/347 (56%), Gaps = 43/347 (12%)

Query: 120 TSVALSPDFTEDKLWLNG---------------------KKLAEQEKSSREMADWKMHIC 158
           TS A +P+F  D LWLNG                     K++  ++ S   ++ WK+HI 
Sbjct: 48  TSAATAPEFERDTLWLNGEPHSIDNERTQNCLRDLRQLRKEMESKDASLPTLSQWKLHIV 107

Query: 159 SENNFPTAAGLASSAAGYSCLVFTLA--YALGLNTSEVSHIARQGSGSACRSMFGGFVRW 216
           SENNFPTAAGLASSAAG++ LV  +A  Y L  +TSE+S IAR+GSGSACRS+FGG+V W
Sbjct: 108 SENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRSLFGGYVAW 167

Query: 217 KTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKSTSSTDGMQRT 276
           +    G+  DG+          S A QI   S W  M+  +LVV+D  K  SST GMQ T
Sbjct: 168 EM---GKAEDGHD---------SMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQLT 215

Query: 277 TLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCLDTYPPIVYMN 336
             TS L++ R+  +VP R   M +A+  +DF  FA+ TM DSN FHA CLD++PPI YMN
Sbjct: 216 VATSELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMN 275

Query: 337 DTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISA 396
           DTS  I+ + H  N   GET VAYTFDAGPNA LY L      L + + + F    G   
Sbjct: 276 DTSKRIISWCHTINQFYGETIVAYTFDAGPNAVLYYLAENESKLFAFIYKLFGSVPGWDK 335

Query: 397 PY-IRGLEYLNILPPVQLPSFTPQPAGL-----LQYLISTKIGSGPK 437
            +    LE  N     +  +FT +   L     +  +I T++GSGP+
Sbjct: 336 KFTTEQLEAFN--HQFESSNFTARELDLELQKDVARVILTQVGSGPQ 380



 Score = 60.5 bits (145), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 12/75 (16%)

Query: 463 YALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFELSNAEQI 522
           Y L  +TSE+S IAR+GSGSACRS+FGG+V W+    G+  +G+          S A QI
Sbjct: 136 YQLPQSTSEISRIARKGSGSACRSLFGGYVAWEM---GKAEDGHD---------SMAVQI 183

Query: 523 ISESYWGSMRVIILV 537
              S W  M+  +LV
Sbjct: 184 ADSSDWPQMKACVLV 198



 Score = 35.0 bits (79), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 34  VAYTFDAGPNACLYVLENTVPLLLSTLVQYF 64
           VAYTFDAGPNA LY L      L + + + F
Sbjct: 297 VAYTFDAGPNAVLYYLAENESKLFAFIYKLF 327


>sp|O13963|MVD1_SCHPO Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=mvd1 PE=3 SV=1
          Length = 393

 Score =  236 bits (602), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/367 (39%), Positives = 199/367 (54%), Gaps = 47/367 (12%)

Query: 116 MHAKTSVALSPDFTEDKLWLNGK----------------------KLAEQEKSSREMADW 153
           +   T+ + S  F  D LWLNG                        L E+     ++   
Sbjct: 46  LRTVTTASCSEKFENDTLWLNGNAEEIFANKRLRVCVEELRKARLDLEEENDDLDKIGAL 105

Query: 154 KMHICSENNFPTAAGLASSAAGYS--CLVFTLAYALGLNTSEVSHIARQGSGSACRSMFG 211
           K+H+ SENNFPTAAGLASSAAGY+  C      Y L    +++S IARQGSGSACRS+FG
Sbjct: 106 KLHVVSENNFPTAAGLASSAAGYAAFCEAIARLYDLPWTPTQLSRIARQGSGSACRSLFG 165

Query: 212 GFVRWKTLPEGQQSDGNGDIGRKQCELSNAEQIISESYWGSMRVIILVVNDQAKSTSSTD 271
           G+V W+    G+   G   +         A Q+     W  +RV +LV +   K  SST 
Sbjct: 166 GYVAWEM---GELHSGADSV---------AVQVEPVENWPEIRVAVLVASAAKKGVSSTA 213

Query: 272 GMQRTTLTSTLYEHRVNTIVPSRCSGMEEALRARDFPRFAELTMKDSNQFHACCLDTYPP 331
           GMQ T  +STL++HR+  IVP R   M+ A+R RDF  FA+LTM DSNQFHACCLDT+PP
Sbjct: 214 GMQATVASSTLFQHRIQNIVPQRIQEMKTAIRERDFETFAKLTMTDSNQFHACCLDTFPP 273

Query: 332 IVYMNDTSHSIVRFVHEFNTVVGETKVAYTFDAGPNACLYVLENTVPLLLSTLVQYFPPS 391
           I Y+NDTS +++R V   N   G+T  AYTFDAGPNA +Y LE    ++L+TL      +
Sbjct: 274 IFYLNDTSRAVIRVVENINATAGKTIAAYTFDAGPNAVIYFLEENSEIVLNTLYAVTKNA 333

Query: 392 SGISAPYIRGLEYLNILPPVQLPSFTPQ-PAGLLQYLISTKIGSGPKILDDIPNNHLLNE 450
            G S  Y           PV + S      +  +  +I T++G+GP++L    +  L++ 
Sbjct: 334 EGWSKQYGSS--------PVTVDSAAANIVSSGISRVILTRVGNGPRVL--TIDESLIDA 383

Query: 451 AGAPKHL 457
           +G PK +
Sbjct: 384 SGNPKFI 390



 Score = 50.1 bits (118), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 12/75 (16%)

Query: 463 YALGLNTSEVSHIARQGSGSACRSMFGGFVRWKTLPEGQQSEGNGDIGRKQFELSNAEQI 522
           Y L    +++S IARQGSGSACRS+FGG+V W+    G+   G   +         A Q+
Sbjct: 139 YDLPWTPTQLSRIARQGSGSACRSLFGGYVAWEM---GELHSGADSV---------AVQV 186

Query: 523 ISESYWGSMRVIILV 537
                W  +RV +LV
Sbjct: 187 EPVENWPEIRVAVLV 201



 Score = 39.7 bits (91), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 35  AYTFDAGPNACLYVLENTVPLLLSTLVQYFPPSSGISAPY 74
           AYTFDAGPNA +Y LE    ++L+TL      + G S  Y
Sbjct: 301 AYTFDAGPNAVIYFLEENSEIVLNTLYAVTKNAEGWSKQY 340


>sp|Q9JZ20|Y1333_NEIMB Uncharacterized protein NMB1333 OS=Neisseria meningitidis serogroup
           B (strain MC58) GN=NMB1333 PE=1 SV=1
          Length = 596

 Score = 34.7 bits (78), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 26/151 (17%)

Query: 19  WDK--KLNKESKKYYIEVAYT------FDAG------PNACLYVLENTVPLLLSTLVQYF 64
           WDK  KLN E  +   EVA T      F +G      PNA    L+N  P   +  ++Y 
Sbjct: 252 WDKFQKLNTELNRLKTEVAATKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYT 311

Query: 65  PPSSGISAPYIRGLEYLNILPPVQVKLSNNDIITLKSELNGIEPIEITFQRMHAKTSVAL 124
              +  +   ++ LE       VQ +  NN++  LK        I+   Q +  K  V  
Sbjct: 312 RYVNASNREVVKDLEKQQKALAVQEQKINNELARLK-------KIQANVQSLLKKQGVTD 364

Query: 125 SPDFTED-----KLWLNGKKLAEQEKSSREM 150
           + + TE      K+  + +KL EQ+ + +++
Sbjct: 365 AAEQTESRRQNAKIAKDARKLLEQKGNEQQL 395


>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1
          Length = 504

 Score = 33.9 bits (76), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 34/145 (23%)

Query: 89  VKLSNNDIITLKSELNGIEPIEITFQRMHAKTSVALSPDFTEDK---LWLN----GKKLA 141
           V  +NND+I + +  +   P          K +V+L+ +FT D+    W N    G  +A
Sbjct: 75  VSTNNNDMIVIANTDSAKFP----------KETVSLAEEFTIDREHHTWANYFKCGLIVA 124

Query: 142 EQEKSSREMADWK-MHICSENNFPTAAGLASSAAGYSCLVFTLA--YALGLNTSEVSHIA 198
            +    + M   K M+I      PT  GL+SSAA   C+  TLA  YA G+     + + 
Sbjct: 125 SKFLQEKAMTKLKGMNITFSGTVPTGGGLSSSAA--FCVASTLAVLYANGVEDISKADLT 182

Query: 199 R------------QGSGSACRSMFG 211
           R             G    C S++G
Sbjct: 183 RITVVSEHYLGLNNGGMDQCASVYG 207


>sp|A1W582|HFQ_ACISJ Protein hfq OS=Acidovorax sp. (strain JS42) GN=hfq PE=3 SV=1
          Length = 83

 Score = 33.1 bits (74), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 10/79 (12%)

Query: 238 LSNAEQIISESYWGSMR-----VIILVVND-----QAKSTSSTDGMQRTTLTSTLYEHRV 287
           +SN  Q++ + +  ++R     V I +VN      Q +S      + R T+T  +Y+H +
Sbjct: 1   MSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI 60

Query: 288 NTIVPSRCSGMEEALRARD 306
           +TIVP R      A  A D
Sbjct: 61  STIVPGRAVNFSTAEPAAD 79


>sp|B9MFY1|HFQ_ACIET Protein hfq OS=Acidovorax ebreus (strain TPSY) GN=hfq PE=3 SV=1
          Length = 83

 Score = 33.1 bits (74), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 10/79 (12%)

Query: 238 LSNAEQIISESYWGSMR-----VIILVVND-----QAKSTSSTDGMQRTTLTSTLYEHRV 287
           +SN  Q++ + +  ++R     V I +VN      Q +S      + R T+T  +Y+H +
Sbjct: 1   MSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI 60

Query: 288 NTIVPSRCSGMEEALRARD 306
           +TIVP R      A  A D
Sbjct: 61  STIVPGRAVNFSTAEPAAD 79


>sp|O14053|YC47_SCHPO Uncharacterized WD repeat-containing protein C1672.07
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPCC1672.07 PE=4 SV=1
          Length = 902

 Score = 32.3 bits (72), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 70  ISAPYIRGLEYLNILPPVQ-VKLSNNDIITLKSELNGIEPIEITFQRMHAKTSVALSPDF 128
           ISA   R L  +++    Q  +LS   +I+   +LN + P E+    +      ALS   
Sbjct: 352 ISAATDRSLRAVSLYQDSQSTELSQGSVISKAKKLN-VRPEELKLPEI-----TALSSSN 405

Query: 129 TEDKLWLNGKKLAEQEKSSREMADWKMHICSENNFPTAAGLASSAAGYSC 178
           T +K W N    A +  SS    +WK     ++  PT+ G +  +   SC
Sbjct: 406 TREKYWDN-VLTAHKNDSSARTWNWKSKTLGQHVLPTSDGTSVRSVCVSC 454


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.134    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,427,525
Number of Sequences: 539616
Number of extensions: 9056460
Number of successful extensions: 19599
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 19523
Number of HSP's gapped (non-prelim): 37
length of query: 566
length of database: 191,569,459
effective HSP length: 123
effective length of query: 443
effective length of database: 125,196,691
effective search space: 55462134113
effective search space used: 55462134113
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)