Query psy11143
Match_columns 940
No_of_seqs 561 out of 3533
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 19:09:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 7E-53 2.4E-57 506.1 56.9 482 6-502 59-565 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 4E-50 1.4E-54 482.2 51.3 399 7-410 156-569 (570)
3 3dmk_A DOWN syndrome cell adhe 100.0 7.9E-46 2.7E-50 462.7 47.9 477 7-507 305-809 (816)
4 1e07_A Carcinoembryonic antige 100.0 3.6E-45 1.2E-49 444.4 51.7 465 7-505 163-638 (642)
5 1e07_A Carcinoembryonic antige 100.0 6.4E-44 2.2E-48 433.4 50.9 459 7-497 70-546 (642)
6 2ec8_A MAST/stem cell growth f 100.0 2.5E-45 8.5E-50 434.9 31.6 397 6-415 78-514 (524)
7 3dmk_A DOWN syndrome cell adhe 100.0 6.5E-44 2.2E-48 445.4 43.8 401 6-412 387-810 (816)
8 3laf_A Deleted in colorectal c 100.0 1.3E-43 4.4E-48 404.0 39.6 368 43-413 19-403 (403)
9 3q9k_A Lactoperoxidase, LPO; b 100.0 4.1E-47 1.4E-51 446.4 7.4 250 484-913 340-592 (595)
10 2ocw_A Polymeric-immunoglobuli 100.0 2.5E-42 8.6E-47 414.2 46.3 396 6-413 73-548 (585)
11 1d2v_C Myeloperoxidase; heme-p 100.0 9.8E-47 3.3E-51 434.4 6.2 249 484-912 213-464 (466)
12 2ec8_A MAST/stem cell growth f 100.0 6E-43 2.1E-47 414.4 35.6 444 28-506 19-509 (524)
13 3kld_A Contactin 4, axcam, BIG 100.0 8.9E-43 3E-47 397.1 35.2 360 45-411 5-383 (384)
14 3qs9_E FL cytokine receptor; i 100.0 1.6E-42 5.3E-47 412.2 38.1 383 5-413 100-512 (527)
15 1bih_A Hemolin; insect immunit 100.0 3E-42 1E-46 391.7 35.0 365 40-410 1-395 (395)
16 1z7z_I Intercellular adhesion 100.0 8.8E-42 3E-46 396.0 34.1 373 7-412 49-450 (450)
17 3p3y_A Neurofascin; IG domains 100.0 1.5E-41 5.1E-46 386.7 34.9 367 41-411 12-403 (404)
18 1cs6_A Axonin-1; neural cell a 100.0 1.6E-41 5.4E-46 384.6 34.9 358 45-410 4-381 (382)
19 3qs7_E FL cytokine receptor; i 100.0 2.9E-41 1E-45 390.6 37.4 383 16-414 3-417 (423)
20 2v5m_A Dscam; neurobiology SPL 100.0 2.6E-41 8.9E-46 383.3 34.3 352 45-409 3-387 (388)
21 2rcj_C Light chain; immunoglob 100.0 7.4E-41 2.5E-45 396.4 38.6 393 6-399 68-512 (523)
22 3v2a_R Vascular endothelial gr 100.0 3.6E-44 1.2E-48 443.7 6.5 402 6-414 288-759 (772)
23 3qs9_E FL cytokine receptor; i 100.0 3.5E-40 1.2E-44 392.0 36.7 426 49-507 52-510 (527)
24 3v2a_R Vascular endothelial gr 100.0 1.1E-40 3.8E-45 412.4 15.8 478 7-506 182-755 (772)
25 2ocw_A Polymeric-immunoglobuli 100.0 2.5E-37 8.5E-42 370.8 44.3 439 49-507 4-546 (585)
26 2rcj_C Light chain; immunoglob 100.0 6.6E-38 2.3E-42 371.1 38.3 408 49-465 4-468 (523)
27 1z7z_I Intercellular adhesion 100.0 6.1E-38 2.1E-42 363.7 34.5 418 48-506 2-448 (450)
28 1qgc_4 Protein (immunoglobulin 100.0 1.3E-36 4.3E-41 350.8 26.2 359 48-408 4-436 (438)
29 3laf_A Deleted in colorectal c 100.0 8.8E-36 3E-40 339.3 31.1 310 7-319 76-401 (403)
30 1wio_A CD4, T-cell surface gly 100.0 2.9E-36 9.9E-41 340.0 23.6 312 54-410 3-362 (363)
31 3kld_A Contactin 4, axcam, BIG 100.0 1.5E-35 5.2E-40 337.4 28.9 308 7-318 61-382 (384)
32 2rik_A Titin; I-SET IG fold, p 100.0 7.4E-34 2.5E-38 307.7 37.7 272 137-411 4-284 (284)
33 2rik_A Titin; I-SET IG fold, p 100.0 1.6E-33 5.5E-38 305.1 36.6 273 43-318 3-283 (284)
34 3p3y_A Neurofascin; IG domains 100.0 1.4E-34 4.7E-39 329.2 28.5 311 6-318 71-402 (404)
35 3qs7_E FL cytokine receptor; i 100.0 5.5E-34 1.9E-38 329.6 30.6 299 6-319 101-414 (423)
36 1cs6_A Axonin-1; neural cell a 100.0 3.9E-34 1.4E-38 323.8 28.1 306 7-318 60-381 (382)
37 2v5m_A Dscam; neurobiology SPL 100.0 4.1E-34 1.4E-38 324.1 27.4 301 6-317 57-387 (388)
38 1bih_A Hemolin; insect immunit 100.0 8.9E-34 3E-38 321.8 27.5 303 6-317 60-394 (395)
39 2yd9_A Receptor-type tyrosine- 100.0 2.5E-32 8.6E-37 299.6 30.9 274 137-414 5-294 (304)
40 1igt_B IGG2A intact antibody - 100.0 1.5E-32 5.1E-37 318.5 30.4 348 50-398 5-432 (444)
41 2yd9_A Receptor-type tyrosine- 100.0 5E-32 1.7E-36 297.2 31.1 272 43-319 4-291 (304)
42 2wim_A N-CAM 2, NCAM2, neural 100.0 4.9E-32 1.7E-36 294.2 30.5 273 138-413 4-286 (291)
43 1qz1_A Neural cell adhesion mo 100.0 1.4E-31 4.8E-36 290.6 33.6 272 138-411 2-290 (291)
44 1qz1_A Neural cell adhesion mo 100.0 2.7E-31 9.2E-36 288.3 32.6 271 45-318 2-289 (291)
45 2wim_A N-CAM 2, NCAM2, neural 100.0 1.3E-31 4.4E-36 290.8 29.8 272 44-319 3-284 (291)
46 3nt1_A Prostaglandin-endoperox 100.0 1.9E-35 6.3E-40 346.6 -1.6 190 484-862 347-543 (587)
47 1hzh_H IGG, immunoglobulin hea 100.0 2.6E-31 8.8E-36 309.4 29.6 346 51-399 6-442 (457)
48 2y25_A Myomesin; structural pr 100.0 7.4E-32 2.5E-36 296.2 22.4 273 138-412 7-316 (317)
49 1qgc_4 Protein (immunoglobulin 100.0 1E-31 3.5E-36 309.8 23.6 306 7-315 74-435 (438)
50 1q4g_A Prostaglandin G/H synth 100.0 1.2E-34 4.2E-39 340.4 -1.1 191 484-861 347-542 (553)
51 2y25_A Myomesin; structural pr 100.0 1.5E-31 5.2E-36 293.7 22.7 273 44-319 6-315 (317)
52 1wio_A CD4, T-cell surface gly 100.0 9.5E-32 3.3E-36 303.0 21.2 267 6-317 65-361 (363)
53 1iga_A IGA1; immunoglobulin; N 100.0 8.6E-30 3E-34 298.3 36.1 349 49-400 5-443 (475)
54 1igy_B IGG1 intact antibody MA 100.0 6.8E-33 2.3E-37 320.6 9.4 349 50-399 4-423 (434)
55 2o26_X MAST/stem cell growth f 100.0 4.2E-30 1.4E-34 279.6 25.3 263 137-413 11-290 (290)
56 2y23_A Myomesin; structural pr 100.0 1.1E-29 3.8E-34 278.2 26.3 265 52-318 8-311 (312)
57 2y23_A Myomesin; structural pr 100.0 1.7E-29 5.8E-34 276.7 26.4 261 146-410 9-311 (312)
58 4fqp_A Poliovirus receptor; im 100.0 3.1E-29 1.1E-33 276.3 28.2 269 141-413 3-306 (313)
59 2o26_X MAST/stem cell growth f 100.0 2.2E-29 7.5E-34 273.9 26.4 261 43-318 10-287 (290)
60 3ejj_X Macrophage colony-stimu 100.0 2.5E-29 8.7E-34 272.5 26.6 270 137-413 3-283 (289)
61 3oq3_B IFN-alpha/beta binding 100.0 2E-29 7E-34 280.4 26.0 258 146-410 37-329 (329)
62 1itb_B Type 1 interleukin-1 re 100.0 4.7E-30 1.6E-34 282.4 18.9 264 146-411 13-314 (315)
63 3ejj_X Macrophage colony-stimu 100.0 5.6E-29 1.9E-33 269.8 26.3 267 44-318 3-280 (289)
64 1ry7_B FGFR-3, fibroblast grow 100.0 1.4E-30 4.8E-35 289.0 13.8 269 144-414 14-330 (334)
65 3o4o_C Interleukin-1 receptor 100.0 1.9E-30 6.5E-35 288.9 14.3 274 137-410 17-334 (339)
66 1ry7_B FGFR-3, fibroblast grow 100.0 2.2E-30 7.6E-35 287.5 14.5 272 49-323 12-331 (334)
67 3oq3_B IFN-alpha/beta binding 100.0 8.1E-29 2.8E-33 275.6 24.3 260 53-317 37-328 (329)
68 4dep_C Interleukin-1 receptor 100.0 2.4E-29 8.1E-34 281.2 19.8 266 145-412 14-334 (349)
69 1itb_B Type 1 interleukin-1 re 100.0 1.9E-29 6.4E-34 277.6 17.5 266 52-318 12-313 (315)
70 1igt_B IGG2A intact antibody - 100.0 3.3E-29 1.1E-33 290.3 20.3 302 6-309 77-435 (444)
71 3rjd_A High affinity immunoglo 100.0 4.9E-28 1.7E-32 258.1 27.0 240 139-401 2-249 (262)
72 3o4o_C Interleukin-1 receptor 100.0 4.7E-30 1.6E-34 285.7 10.4 276 42-317 15-333 (339)
73 4dep_C Interleukin-1 receptor 100.0 9.5E-29 3.2E-33 276.3 19.9 267 52-319 14-333 (349)
74 3rjd_A High affinity immunoglo 100.0 1.9E-27 6.4E-32 253.6 29.0 241 45-310 1-250 (262)
75 1zvo_C Myeloma immunoglobulin 100.0 1.5E-26 5.2E-31 273.9 39.7 356 50-410 5-504 (512)
76 4fqp_A Poliovirus receptor; im 100.0 1.2E-27 4.1E-32 263.6 28.1 265 48-319 3-304 (313)
77 4dkd_C Macrophage colony-stimu 100.0 3E-28 1E-32 264.5 21.9 265 138-413 4-283 (292)
78 1hzh_H IGG, immunoglobulin hea 100.0 2.3E-28 7.8E-33 284.5 21.5 303 6-310 77-445 (457)
79 4fom_A Poliovirus receptor-rel 100.0 6.6E-29 2.3E-33 272.6 15.7 266 146-413 7-302 (308)
80 2wng_A Tyrosine-protein phosph 100.0 6.3E-28 2.2E-32 267.5 22.2 264 140-405 5-313 (327)
81 3u83_A Poliovirus receptor-rel 100.0 1E-27 3.5E-32 265.3 23.9 270 45-319 14-320 (331)
82 3u83_A Poliovirus receptor-rel 100.0 1.4E-27 4.6E-32 264.4 24.6 267 139-413 15-322 (331)
83 1igy_B IGG1 intact antibody MA 100.0 1.2E-29 4E-34 293.4 8.0 302 6-309 76-425 (434)
84 4fom_A Poliovirus receptor-rel 100.0 5.5E-28 1.9E-32 265.2 18.9 262 53-318 7-299 (308)
85 1iga_A IGA1; immunoglobulin; N 100.0 1.3E-26 4.6E-31 271.2 31.4 301 5-309 77-444 (475)
86 4dkd_C Macrophage colony-stimu 100.0 4.4E-28 1.5E-32 263.1 17.0 265 44-319 3-281 (292)
87 2oz4_A Intercellular adhesion 100.0 3.3E-27 1.1E-31 253.9 23.6 238 148-412 13-265 (265)
88 2wng_A Tyrosine-protein phosph 100.0 4.7E-27 1.6E-31 260.5 25.5 263 46-311 4-311 (327)
89 3q9k_A Lactoperoxidase, LPO; b 100.0 3.7E-30 1.3E-34 302.6 0.1 149 646-937 1-150 (595)
90 3mjg_X Beta-type platelet-deri 99.9 2.5E-27 8.4E-32 257.3 20.6 261 140-414 2-281 (289)
91 2oz4_A Intercellular adhesion 99.9 1.4E-26 4.7E-31 249.0 24.7 236 56-318 14-263 (265)
92 3mjg_X Beta-type platelet-deri 99.9 9.5E-27 3.2E-31 252.7 23.1 261 46-319 1-278 (289)
93 2jll_A NCAM2, neural cell adhe 99.9 9.4E-25 3.2E-29 247.2 39.7 351 45-411 1-384 (389)
94 3vh8_G Killer cell immunoglobu 99.9 5.9E-27 2E-31 258.6 20.8 270 135-413 21-315 (316)
95 3vh8_G Killer cell immunoglobu 99.9 5.9E-27 2E-31 258.6 19.8 263 36-308 15-297 (316)
96 2nzi_A Titin; IG-domain, FNIII 99.9 4.1E-25 1.4E-29 241.5 25.5 258 44-312 3-283 (305)
97 2nzi_A Titin; IG-domain, FNIII 99.9 1.1E-24 3.7E-29 238.2 27.7 253 137-404 3-283 (305)
98 1zvo_C Myeloma immunoglobulin 99.9 8.2E-24 2.8E-28 250.4 33.1 309 5-318 77-502 (512)
99 2jll_A NCAM2, neural cell adhe 99.9 1.3E-23 4.4E-28 237.8 32.4 264 139-412 2-289 (389)
100 2wqr_A IG epsilon chain C regi 99.9 1E-24 3.4E-29 241.8 17.4 263 138-400 7-309 (323)
101 2a38_A Titin; Z1Z2, structural 99.9 3.2E-23 1.1E-27 210.6 23.7 183 228-410 4-194 (194)
102 2wqr_A IG epsilon chain C regi 99.9 1.7E-24 5.7E-29 240.1 14.8 264 45-308 7-309 (323)
103 1za6_B IGG heavy chain; immuno 99.9 8.9E-24 3E-28 236.5 20.6 259 50-309 5-331 (344)
104 1za6_B IGG heavy chain; immuno 99.9 7.2E-24 2.5E-28 237.2 19.1 257 143-400 5-330 (344)
105 1d2v_A Myeloperoxidase; heme-p 99.9 4.3E-26 1.5E-30 208.5 -0.3 55 664-718 2-56 (104)
106 2iep_A Muscle-specific kinase 99.9 4.2E-23 1.4E-27 209.4 19.9 184 228-413 6-192 (192)
107 2yd1_A Tyrosine-protein phosph 99.9 2.2E-22 7.6E-27 208.4 25.3 187 228-414 5-203 (212)
108 3lcy_A Titin; A-BAND, IG tande 99.9 4.2E-22 1.4E-26 202.3 23.3 182 228-411 6-196 (197)
109 2a38_A Titin; Z1Z2, structural 99.9 2.1E-22 7.2E-27 204.5 20.8 183 44-226 4-194 (194)
110 2yd6_A PTPRD protein; hydrolas 99.9 9.7E-22 3.3E-26 203.8 25.9 185 228-412 5-205 (212)
111 2yd1_A Tyrosine-protein phosph 99.9 7.5E-22 2.6E-26 204.4 24.7 184 44-227 5-200 (212)
112 2j8h_A Titin, connectin; cardi 99.9 5.8E-22 2E-26 202.0 22.8 182 228-411 3-197 (197)
113 2v5t_A NCAM2, N-CAM 2, neural 99.9 7.6E-22 2.6E-26 199.3 21.8 182 229-411 2-188 (189)
114 2wv3_A Neuroplastin; igcam, me 99.9 2.6E-21 9.1E-26 196.5 25.5 175 229-410 3-189 (190)
115 2iep_A Muscle-specific kinase 99.9 2.4E-22 8.3E-27 203.7 17.6 183 42-226 4-189 (192)
116 2yd6_A PTPRD protein; hydrolas 99.9 1.6E-21 5.5E-26 202.1 23.4 184 43-226 4-203 (212)
117 3lcy_A Titin; A-BAND, IG tande 99.9 1.1E-21 3.9E-26 199.1 20.2 182 43-226 5-195 (197)
118 2v9r_A Roundabout homolog 1; p 99.9 8.5E-22 2.9E-26 202.7 18.9 194 223-417 3-208 (212)
119 2c5d_C AXL oncogene, tyrosine- 99.9 2.7E-21 9.3E-26 197.1 22.4 175 229-409 2-191 (195)
120 2v44_A NCAM2, neural cell adhe 99.9 3.1E-21 1E-25 195.5 22.7 176 232-410 5-186 (189)
121 3rbs_A Myomesin-1; immunoglobu 99.9 1.1E-21 3.6E-26 204.1 19.3 172 236-410 9-206 (207)
122 2j8h_A Titin, connectin; cardi 99.9 1.7E-21 6E-26 198.4 20.5 183 44-226 3-196 (197)
123 2va4_A NCAM2, N-CAM 2, neural 99.9 5.9E-21 2E-25 193.2 24.0 179 229-410 2-192 (192)
124 1rhf_A Tyrosine-protein kinase 99.9 2.9E-21 9.9E-26 194.4 21.3 174 229-410 2-182 (182)
125 1epf_A NCAM, protein (neural c 99.9 5.2E-21 1.8E-25 193.9 22.3 181 229-410 2-190 (191)
126 2vr9_A Roundabout 1, ROBO; imm 99.9 2E-21 6.8E-26 201.4 19.0 189 223-412 3-207 (217)
127 3grw_A Fibroblast growth facto 99.9 4.6E-21 1.6E-25 201.8 20.9 187 228-414 10-221 (241)
128 2c5d_C AXL oncogene, tyrosine- 99.9 7.6E-21 2.6E-25 193.8 21.5 175 45-225 2-191 (195)
129 2v5t_A NCAM2, N-CAM 2, neural 99.9 3E-21 1E-25 194.8 18.2 181 45-226 2-187 (189)
130 3ojm_B Fibroblast growth facto 99.9 4.3E-21 1.5E-25 199.9 19.3 178 237-414 27-224 (231)
131 2v44_A NCAM2, neural cell adhe 99.9 1.4E-20 4.9E-25 190.5 22.3 176 47-225 4-185 (189)
132 2wv3_A Neuroplastin; igcam, me 99.9 1.6E-20 5.4E-25 190.8 22.6 176 138-318 3-189 (190)
133 2r15_A Myomesin-1; sarcomeric 99.9 1.7E-20 6E-25 193.1 22.7 171 242-412 15-211 (212)
134 1epf_A NCAM, protein (neural c 99.9 1.8E-20 6.3E-25 189.9 22.1 180 45-225 2-189 (191)
135 1rhf_A Tyrosine-protein kinase 99.9 1.2E-20 4.1E-25 189.9 20.4 173 45-225 2-181 (182)
136 3rbs_A Myomesin-1; immunoglobu 99.9 6.9E-21 2.3E-25 198.0 17.7 170 145-317 9-205 (207)
137 2va4_A NCAM2, N-CAM 2, neural 99.9 2.8E-20 9.4E-25 188.3 21.8 179 45-226 2-192 (192)
138 4fa8_A Secreted protein BARF1; 99.9 1.9E-21 6.5E-26 201.8 13.0 164 238-403 2-194 (203)
139 2c1o_A IGK-C protein; FAB frag 99.8 7.7E-21 2.6E-25 202.6 16.7 200 15-217 11-245 (254)
140 1f97_A Junction adhesion molec 99.8 1.2E-20 4.2E-25 193.8 17.7 180 231-412 3-208 (212)
141 2v9r_A Roundabout homolog 1; p 99.8 8.3E-21 2.8E-25 195.3 16.3 190 44-235 8-209 (212)
142 2vr9_A Roundabout 1, ROBO; imm 99.8 1.7E-20 5.9E-25 194.3 17.9 182 44-226 8-205 (217)
143 3s97_C Contactin-1; carbonic a 99.8 1.7E-20 5.8E-25 191.1 17.4 177 234-411 13-201 (201)
144 2ifg_A High affinity nerve gro 99.8 1.4E-21 4.8E-26 219.1 9.0 201 202-413 136-347 (347)
145 3k0w_A Mucosa-associated lymph 99.8 5.8E-20 2E-24 191.5 19.9 173 228-413 17-204 (218)
146 3grw_A Fibroblast growth facto 99.8 8.7E-20 3E-24 192.0 20.8 184 44-227 10-218 (241)
147 1f97_A Junction adhesion molec 99.8 3.4E-20 1.2E-24 190.5 16.6 178 45-226 1-206 (212)
148 3ojm_B Fibroblast growth facto 99.8 5.2E-20 1.8E-24 191.7 17.9 184 45-228 15-222 (231)
149 2r15_A Myomesin-1; sarcomeric 99.8 1.8E-19 6.2E-24 185.4 20.5 168 151-318 15-209 (212)
150 4fa8_A Secreted protein BARF1; 99.8 2.4E-20 8.1E-25 193.5 13.9 164 147-311 2-194 (203)
151 3sgj_C Human FCG3A receptor; r 99.8 1E-19 3.6E-24 188.4 18.5 168 229-414 7-177 (204)
152 2x1w_L Vascular endothelial gr 99.8 1E-19 3.5E-24 189.1 18.2 177 236-414 14-210 (213)
153 3k0w_A Mucosa-associated lymph 99.8 2.7E-19 9.1E-24 186.5 20.9 170 44-226 17-201 (218)
154 3b5h_A Cervical EMMPRIN, HAB18 99.8 5.9E-19 2E-23 177.9 22.7 163 239-411 8-183 (184)
155 3jz7_A MCAR, CAR, coxsackievir 99.8 3.5E-20 1.2E-24 190.4 13.7 175 235-412 6-213 (214)
156 2c1o_A IGK-C protein; FAB frag 99.8 1.3E-19 4.4E-24 193.1 18.2 199 106-309 11-245 (254)
157 3p2t_A Leukocyte immunoglobuli 99.8 6.3E-20 2.2E-24 187.8 14.8 168 228-399 4-179 (196)
158 3p2t_A Leukocyte immunoglobuli 99.8 1E-19 3.5E-24 186.3 15.6 168 44-215 4-179 (196)
159 1nbq_A JAM, junctional adhesio 99.8 1.5E-20 5.2E-25 192.7 9.4 179 229-409 4-207 (209)
160 3r4d_A CEA-related cell adhesi 99.8 2.8E-19 9.6E-24 183.7 18.3 174 236-413 6-202 (208)
161 3s97_C Contactin-1; carbonic a 99.8 1.2E-19 4.2E-24 184.6 15.3 180 46-226 9-200 (201)
162 1fnl_A Low affinity immunoglob 99.8 5.1E-19 1.7E-23 177.8 19.2 167 228-412 6-175 (175)
163 1nbq_A JAM, junctional adhesio 99.8 4E-20 1.4E-24 189.5 11.1 179 45-225 4-207 (209)
164 2gi7_A GPVI protein; IG-like d 99.8 2.3E-19 7.7E-24 182.2 16.1 161 42-215 5-168 (184)
165 2d3v_A Leukocyte immunoglobuli 99.8 1.2E-19 4.1E-24 185.9 13.7 168 44-215 4-180 (196)
166 3bp6_B Programmed cell death 1 99.8 2.9E-19 9.8E-24 183.3 16.5 173 235-413 8-195 (202)
167 2fbo_J V1V2;, variable region- 99.8 3.3E-19 1.1E-23 188.5 17.1 176 234-409 7-250 (250)
168 1uct_A Immunoglobulin alpha FC 99.8 2.8E-19 9.4E-24 187.3 16.0 181 43-227 7-198 (218)
169 3r4d_A CEA-related cell adhesi 99.8 4.9E-19 1.7E-23 181.9 17.1 177 143-323 4-202 (208)
170 1vca_A VCAM-D1,2, human vascul 99.8 9.4E-19 3.2E-23 180.9 19.3 172 239-414 11-200 (202)
171 2x1w_L Vascular endothelial gr 99.8 4.3E-19 1.5E-23 184.3 16.7 175 51-227 13-207 (213)
172 1ugn_A LIR1, leukocyte immunog 99.8 2.2E-19 7.4E-24 184.1 13.9 168 44-215 4-181 (198)
173 1f2q_A High affinity immunoglo 99.8 4E-19 1.4E-23 178.6 15.2 169 228-414 3-174 (176)
174 1vca_A VCAM-D1,2, human vascul 99.8 9.3E-19 3.2E-23 180.9 18.2 181 142-324 4-200 (202)
175 1fnl_A Low affinity immunoglob 99.8 1.4E-18 4.7E-23 174.6 18.9 165 44-226 6-173 (175)
176 1ugn_A LIR1, leukocyte immunog 99.8 2.6E-19 8.9E-24 183.5 13.8 179 228-410 4-197 (198)
177 2gi7_A GPVI protein; IG-like d 99.8 2.4E-19 8.1E-24 182.0 13.2 159 228-399 7-168 (184)
178 3sgj_C Human FCG3A receptor; r 99.8 1E-18 3.5E-23 180.9 17.7 166 137-319 6-174 (204)
179 3jz7_A MCAR, CAR, coxsackievir 99.8 3.1E-19 1.1E-23 183.3 13.8 174 144-318 6-211 (214)
180 2ifg_A High affinity nerve gro 99.8 4.4E-20 1.5E-24 206.9 8.0 198 110-318 136-344 (347)
181 2d3v_A Leukocyte immunoglobuli 99.8 2.6E-19 8.8E-24 183.4 13.0 169 228-400 4-181 (196)
182 1f2q_A High affinity immunoglo 99.8 4E-19 1.4E-23 178.5 14.1 167 42-226 1-170 (176)
183 1uct_A Immunoglobulin alpha FC 99.8 3.6E-19 1.2E-23 186.5 13.8 181 228-412 8-199 (218)
184 3bp6_B Programmed cell death 1 99.8 5.5E-19 1.9E-23 181.2 14.9 177 143-323 7-197 (202)
185 2ny1_B T-cell surface glycopro 99.8 9E-19 3.1E-23 176.9 16.0 160 238-414 4-182 (184)
186 2fbo_J V1V2;, variable region- 99.8 9.1E-19 3.1E-23 185.0 16.3 175 50-224 7-249 (250)
187 1oll_A NK receptor; immune sys 99.8 1.1E-18 3.6E-23 177.8 15.5 166 44-214 3-172 (188)
188 1hng_A CD2; T lymphocyte adhes 99.8 8.5E-19 2.9E-23 177.1 14.2 154 239-409 6-174 (176)
189 1oll_A NK receptor; immune sys 99.8 6.9E-19 2.4E-23 179.2 12.8 177 229-410 4-187 (188)
190 4frw_A Poliovirus receptor-rel 99.8 2.6E-18 9E-23 176.1 17.1 178 234-411 4-211 (218)
191 3b5h_A Cervical EMMPRIN, HAB18 99.8 9.5E-18 3.3E-22 169.0 20.9 162 55-226 8-182 (184)
192 3mj6_A Junctional adhesion mol 99.8 1.4E-18 4.8E-23 186.0 15.4 197 46-247 6-257 (268)
193 3ry4_A Low affinity immunoglob 99.8 4.8E-18 1.7E-22 168.9 17.9 163 230-410 5-170 (170)
194 4frw_A Poliovirus receptor-rel 99.8 3.9E-18 1.3E-22 174.8 17.4 177 50-226 4-210 (218)
195 3mj8_L Stimulatory hamster ant 99.8 3.5E-18 1.2E-22 176.5 16.7 173 232-405 4-207 (213)
196 3mj8_L Stimulatory hamster ant 99.8 3.9E-18 1.3E-22 176.1 16.3 174 47-221 3-207 (213)
197 1jbj_A CD3 epsilon and gamma e 99.8 1.4E-18 4.9E-23 176.9 12.2 146 240-401 10-179 (186)
198 1hng_A CD2; T lymphocyte adhes 99.8 5.5E-18 1.9E-22 171.1 16.2 156 54-226 5-175 (176)
199 3ry4_A Low affinity immunoglob 99.8 9.3E-18 3.2E-22 166.9 17.3 163 45-225 4-169 (170)
200 1b6u_A KIR2DL3, P58 killer cel 99.8 3.8E-18 1.3E-22 183.5 15.3 217 43-267 5-240 (257)
201 2ny1_B T-cell surface glycopro 99.8 4.3E-18 1.5E-22 172.0 14.5 159 53-228 3-180 (184)
202 3d9a_L Light chain of hyhel10 99.8 4.4E-18 1.5E-22 175.8 14.8 170 233-402 5-204 (213)
203 1mq8_A ICAM-1, intercellular a 99.8 5E-18 1.7E-22 185.5 15.5 266 48-325 2-288 (291)
204 3d9a_L Light chain of hyhel10 99.8 7.9E-18 2.7E-22 173.9 16.2 171 48-218 4-204 (213)
205 3mj6_A Junctional adhesion mol 99.8 8E-18 2.7E-22 180.1 16.5 177 231-412 7-238 (268)
206 2pet_A Lutheran blood group gl 99.8 5.5E-18 1.9E-22 176.8 14.7 175 234-409 5-229 (231)
207 4f80_A Butyrophilin subfamily 99.8 1.1E-17 3.6E-22 175.0 16.8 172 237-412 12-214 (226)
208 3sbw_C Programmed cell death 1 99.8 1.9E-17 6.4E-22 171.8 18.5 177 235-414 7-214 (222)
209 2pet_A Lutheran blood group gl 99.7 6.1E-18 2.1E-22 176.4 14.6 176 50-226 5-230 (231)
210 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.8E-17 6.1E-22 170.5 17.5 166 42-213 5-183 (201)
211 1jbj_A CD3 epsilon and gamma e 99.7 4.1E-18 1.4E-22 173.5 12.2 147 55-217 9-179 (186)
212 4i0k_A CD276 antigen; immunogl 99.7 5.2E-18 1.8E-22 176.2 11.7 175 238-414 4-209 (222)
213 1p6f_A NKP46, natural cytotoxi 99.7 2E-17 6.7E-22 176.3 16.3 180 43-227 5-191 (242)
214 3nl4_L Antigen binding fragmen 99.7 2.2E-17 7.6E-22 170.4 16.1 166 46-211 2-198 (213)
215 1lk3_L 9D7 light chain; antige 99.7 3.5E-17 1.2E-21 168.9 17.5 166 52-217 7-202 (210)
216 3nl4_L Antigen binding fragmen 99.7 2.3E-17 8E-22 170.3 16.0 165 231-395 3-198 (213)
217 1nkr_A P58-CL42 KIR; inhibitor 99.7 5.3E-17 1.8E-21 166.9 18.6 166 228-399 7-185 (201)
218 1mq8_A ICAM-1, intercellular a 99.7 6.6E-18 2.3E-22 184.5 11.5 255 142-412 3-283 (291)
219 4f80_A Butyrophilin subfamily 99.7 3.5E-17 1.2E-21 171.1 16.6 171 146-319 12-213 (226)
220 1lk3_L 9D7 light chain; antige 99.7 6.3E-17 2.2E-21 167.0 17.2 167 145-311 7-204 (210)
221 3s96_B 3B5H10 FAB light chain; 99.7 5.4E-17 1.8E-21 168.0 16.5 173 232-405 4-214 (218)
222 1f3r_B FV antibody fragment; I 99.7 4.1E-17 1.4E-21 174.6 15.9 177 236-412 7-246 (257)
223 2if7_A SLAM family member 6; N 99.7 1.7E-16 5.7E-21 162.5 19.1 160 235-405 4-186 (193)
224 3sbw_C Programmed cell death 1 99.7 2.3E-16 7.7E-21 163.6 19.9 173 144-318 7-210 (222)
225 1sy6_A T-cell surface glycopro 99.7 1.2E-17 4.2E-22 172.8 10.1 156 241-410 15-203 (204)
226 2ghw_B Anti-SARS SCFV antibody 99.7 1.6E-16 5.5E-21 168.3 19.0 174 237-410 10-241 (247)
227 4i0k_A CD276 antigen; immunogl 99.7 1.7E-17 5.6E-22 172.4 11.1 175 53-229 3-208 (222)
228 1q0x_L FAB 9B1, light chain; a 99.7 1.3E-16 4.3E-21 164.8 17.5 169 236-404 7-208 (212)
229 3s96_B 3B5H10 FAB light chain; 99.7 8.5E-17 2.9E-21 166.5 16.2 174 46-220 2-213 (218)
230 3tv3_L PGT128 light chain, IG 99.7 6E-17 2E-21 167.1 14.9 166 238-405 9-205 (211)
231 2p1y_A Bispecific alpha/beta T 99.7 1.8E-16 6.3E-21 166.7 18.8 166 232-398 3-222 (238)
232 1dr9_A B7-1 (CD80), T lymphocy 99.7 7.3E-17 2.5E-21 165.1 15.1 166 238-407 3-197 (201)
233 1b6u_A KIR2DL3, P58 killer cel 99.7 5.7E-17 1.9E-21 174.3 14.6 217 137-360 6-240 (257)
234 1q0x_L FAB 9B1, light chain; a 99.7 1.2E-16 4.2E-21 164.9 16.5 170 48-218 4-206 (212)
235 2zg1_A Sialic acid-binding IG- 99.7 3E-16 1E-20 161.9 19.4 170 49-224 4-210 (214)
236 3r06_A Anti-mouse CD3epsilon a 99.7 1.3E-16 4.6E-21 164.6 16.7 172 46-217 2-203 (213)
237 3sob_L Antibody light chain; b 99.7 1.5E-16 5E-21 166.8 17.2 176 45-220 24-229 (237)
238 2zg1_A Sialic acid-binding IG- 99.7 2E-16 6.9E-21 163.2 17.9 170 234-409 5-211 (214)
239 1c1e_H Catalytic antibody 1E9 99.7 2.1E-16 7.1E-21 164.2 17.9 174 50-224 5-217 (219)
240 2if7_A SLAM family member 6; N 99.7 1.4E-16 4.6E-21 163.2 16.2 157 144-311 4-184 (193)
241 3esu_F Antibody 14B7* light ch 99.7 3E-16 1E-20 166.4 19.5 167 46-212 5-231 (250)
242 1nqb_A Single-chain antibody f 99.7 2.9E-16 9.8E-21 168.2 19.5 176 235-412 6-234 (256)
243 1p6f_A NKP46, natural cytotoxi 99.7 1.3E-16 4.4E-21 169.9 16.6 177 137-319 6-191 (242)
244 2ghw_B Anti-SARS SCFV antibody 99.7 3.3E-16 1.1E-20 165.8 19.7 180 144-323 8-246 (247)
245 3uzq_A Anti-dengue MAB 4E11; d 99.7 8E-17 2.7E-21 171.7 14.9 184 233-416 5-249 (253)
246 3tv3_L PGT128 light chain, IG 99.7 5.7E-17 1.9E-21 167.3 13.2 170 49-221 5-205 (211)
247 3pv7_A B7-H6, IG-like domain-c 99.7 1.3E-16 4.3E-21 169.1 16.1 173 235-410 9-225 (248)
248 1c1e_H Catalytic antibody 1E9 99.7 8.1E-17 2.8E-21 167.3 14.0 172 236-408 7-217 (219)
249 1f3r_B FV antibody fragment; I 99.7 2E-16 6.9E-21 169.2 17.3 176 51-226 6-244 (257)
250 1hnf_A CD2; T lymphocyte adhes 99.7 3.1E-16 1.1E-20 159.5 17.5 156 236-408 6-178 (182)
251 2p1y_A Bispecific alpha/beta T 99.7 3.8E-16 1.3E-20 164.3 18.7 166 48-214 3-222 (238)
252 1nqb_A Single-chain antibody f 99.7 6.2E-16 2.1E-20 165.6 20.6 176 50-227 5-233 (256)
253 3pv7_A B7-H6, IG-like domain-c 99.7 1.8E-16 6.1E-21 168.0 16.1 172 51-225 9-224 (248)
254 3auv_A SC-DSFV derived from th 99.7 3.7E-16 1.3E-20 169.1 18.6 183 230-412 13-255 (276)
255 3esu_F Antibody 14B7* light ch 99.7 4.7E-16 1.6E-20 165.0 18.8 166 231-396 6-231 (250)
256 3umt_A SCFV heavy chain and li 99.7 4.5E-16 1.5E-20 166.1 18.2 179 236-414 9-248 (256)
257 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.6E-15 5.3E-20 162.2 21.8 181 231-412 5-249 (256)
258 1nfd_E H57 FAB; complex (immun 99.7 4.7E-17 1.6E-21 168.0 9.6 166 52-217 6-202 (212)
259 1nfd_E H57 FAB; complex (immun 99.7 3.9E-17 1.3E-21 168.6 8.9 165 236-400 6-201 (212)
260 2xzc_L FAB A.17 light chain; i 99.7 2.4E-16 8.3E-21 163.3 14.8 169 51-219 6-207 (216)
261 3auv_A SC-DSFV derived from th 99.7 7.5E-16 2.6E-20 166.7 19.3 170 45-214 12-236 (276)
262 4fmk_A Poliovirus receptor-rel 99.7 2.5E-16 8.5E-21 162.1 14.7 173 236-409 8-215 (225)
263 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.9E-16 6.6E-21 165.0 13.8 172 236-408 7-220 (222)
264 1moe_A Anti-CEA MAB T84.66; an 99.7 5.5E-16 1.9E-20 163.2 17.4 165 232-396 4-219 (240)
265 3r06_A Anti-mouse CD3epsilon a 99.7 7.8E-16 2.7E-20 158.8 18.1 172 140-311 3-205 (213)
266 3bkj_L WO2 IGG2A FAB fragment 99.7 3.1E-16 1.1E-20 167.0 15.3 173 45-217 34-241 (252)
267 1sy6_A T-cell surface glycopro 99.7 8.9E-17 3E-21 166.3 10.8 155 150-317 15-202 (204)
268 4fmk_A Poliovirus receptor-rel 99.7 3.8E-16 1.3E-20 160.7 15.3 173 52-226 8-218 (225)
269 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 5E-16 1.7E-20 161.8 16.3 173 51-224 6-220 (222)
270 1moe_A Anti-CEA MAB T84.66; an 99.7 6.2E-16 2.1E-20 162.8 17.2 166 47-212 3-219 (240)
271 3sob_L Antibody light chain; b 99.7 8.7E-16 3E-20 160.9 18.0 176 139-314 25-231 (237)
272 1qok_A MFE-23 recombinant anti 99.7 7.6E-16 2.6E-20 167.3 18.1 178 234-412 31-269 (282)
273 3gkz_A Anti-methamphetamine si 99.7 1.5E-15 5E-20 162.1 19.7 168 47-214 10-235 (257)
274 3gkz_A Anti-methamphetamine si 99.7 1.1E-15 3.9E-20 163.0 18.7 180 233-412 12-250 (257)
275 3juy_B 3B3 single chain varian 99.7 1.2E-15 4E-20 162.9 18.8 172 228-399 5-244 (256)
276 3uzq_A Anti-dengue MAB 4E11; d 99.7 6.6E-16 2.3E-20 164.5 16.8 180 48-227 4-244 (253)
277 1dr9_A B7-1 (CD80), T lymphocy 99.7 3.2E-16 1.1E-20 160.4 13.7 164 147-314 3-196 (201)
278 3umt_A SCFV heavy chain and li 99.7 1.4E-15 4.9E-20 162.2 19.1 178 51-228 8-246 (256)
279 2xzc_L FAB A.17 light chain; i 99.7 7.9E-16 2.7E-20 159.4 16.4 167 145-311 7-207 (216)
280 3bqu_C 3H6 FAB light chain; be 99.7 6.3E-17 2.1E-21 169.7 7.9 172 45-216 23-224 (233)
281 2v5y_A Receptor-type tyrosine- 99.7 1.6E-14 5.4E-19 178.1 30.6 336 60-414 91-460 (731)
282 2znx_A SCFV; fluorotryptohpan, 99.7 1.2E-15 4E-20 161.7 17.6 171 232-402 4-229 (242)
283 3d9a_H Heavy chain of hyhel10 99.7 3.3E-16 1.1E-20 161.7 12.9 167 236-404 7-207 (210)
284 3juy_B 3B3 single chain varian 99.7 2.4E-15 8.2E-20 160.5 19.9 172 44-215 5-244 (256)
285 2znx_A SCFV; fluorotryptohpan, 99.7 9.8E-16 3.3E-20 162.3 16.6 167 47-213 3-222 (242)
286 3d9a_H Heavy chain of hyhel10 99.7 6.6E-16 2.3E-20 159.4 14.9 168 51-220 6-207 (210)
287 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 9.9E-16 3.4E-20 163.7 16.7 170 46-216 4-235 (256)
288 1qok_A MFE-23 recombinant anti 99.7 1.8E-15 6.3E-20 164.2 18.6 178 48-226 29-267 (282)
289 3qib_D 2B4 beta chain; IG doma 99.6 9.6E-16 3.3E-20 164.9 15.7 197 106-311 3-247 (270)
290 2vol_A Murine IGG FC; FC, zinc 99.6 5.2E-16 1.8E-20 160.5 13.0 166 233-399 6-196 (207)
291 1ccz_A Protein (CD58); LFA-3, 99.6 5.9E-16 2E-20 155.6 12.9 152 238-408 4-168 (171)
292 1mju_H Immunoglobulin MS6-12; 99.6 7.4E-16 2.5E-20 161.8 14.2 179 235-414 6-220 (227)
293 3qib_D 2B4 beta chain; IG doma 99.6 5.5E-16 1.9E-20 166.8 13.5 195 198-400 3-244 (270)
294 2rgs_A I, IG gamma-2B heavy ch 99.6 4E-16 1.4E-20 162.8 11.9 171 229-400 9-205 (218)
295 3mtr_A N-CAM-1, NCAM-1, neural 99.6 2.6E-15 8.7E-20 155.6 17.8 180 228-413 18-211 (215)
296 1svz_A Immunoglobulin;, single 99.6 2.3E-15 7.8E-20 159.5 17.6 166 232-397 4-228 (247)
297 3bkj_L WO2 IGG2A FAB fragment 99.6 1.2E-15 4.2E-20 162.3 15.7 171 139-309 35-241 (252)
298 1svz_A Immunoglobulin;, single 99.6 3.4E-15 1.2E-19 158.1 18.9 167 47-213 3-228 (247)
299 2rgs_A I, IG gamma-2B heavy ch 99.6 4.7E-16 1.6E-20 162.3 11.9 172 44-216 8-205 (218)
300 3ux9_B SCFV antibody; five hel 99.6 3.6E-15 1.2E-19 158.8 18.9 163 235-398 8-236 (256)
301 3bqu_C 3H6 FAB light chain; be 99.6 2.1E-16 7.2E-21 165.6 9.1 169 231-399 25-223 (233)
302 3eow_R Poliovirus receptor; im 99.6 4.4E-16 1.5E-20 162.0 11.4 171 145-317 6-210 (221)
303 4dzb_B Vbeta2 (MAIT T cell rec 99.6 1.2E-15 4E-20 161.5 14.9 169 232-400 4-220 (246)
304 2vol_A Murine IGG FC; FC, zinc 99.6 8.5E-16 2.9E-20 158.9 13.3 167 49-216 6-197 (207)
305 1mju_H Immunoglobulin MS6-12; 99.6 3E-15 1E-19 157.2 17.6 177 49-226 4-216 (227)
306 2j6e_L IGM, FAB light chain; a 99.6 2.5E-16 8.6E-21 165.0 9.3 169 236-404 26-228 (234)
307 1pz5_B Heavy chain of FAB (SYA 99.6 3.5E-15 1.2E-19 155.1 17.7 170 51-221 6-215 (220)
308 1hnf_A CD2; T lymphocyte adhes 99.6 2.8E-15 9.6E-20 152.5 16.5 155 52-223 6-177 (182)
309 1pz5_B Heavy chain of FAB (SYA 99.6 1.7E-15 5.9E-20 157.5 14.8 170 236-406 7-216 (220)
310 2j6e_L IGM, FAB light chain; a 99.6 2.8E-16 9.7E-21 164.6 8.9 168 52-219 26-227 (234)
311 1ccz_A Protein (CD58); LFA-3, 99.6 2.1E-15 7.2E-20 151.6 14.7 153 53-224 3-168 (171)
312 4dzb_B Vbeta2 (MAIT T cell rec 99.6 4.2E-15 1.4E-19 157.2 17.8 171 140-310 3-222 (246)
313 3eow_R Poliovirus receptor; im 99.6 3.5E-16 1.2E-20 162.7 9.1 172 52-226 6-211 (221)
314 3ux9_B SCFV antibody; five hel 99.6 5.4E-15 1.8E-19 157.5 18.3 165 50-214 7-236 (256)
315 3mtr_A N-CAM-1, NCAM-1, neural 99.6 7.5E-15 2.6E-19 152.1 18.4 178 44-226 18-208 (215)
316 1op3_H FAB 2G12, heavy chain; 99.6 4.3E-15 1.5E-19 155.5 16.4 167 51-218 6-216 (225)
317 2dru_A Chimera of CD48 antigen 99.6 5E-15 1.7E-19 150.1 15.7 153 237-407 7-177 (180)
318 2gjj_A A21 single-chain antibo 99.6 8.1E-15 2.8E-19 157.7 18.1 169 45-213 5-239 (264)
319 3omz_A Human vdelta1 gamma del 99.6 3.4E-15 1.2E-19 159.6 14.9 184 230-413 3-252 (259)
320 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.3E-14 4.4E-19 151.8 18.8 168 236-405 7-221 (223)
321 3omz_A Human vdelta1 gamma del 99.6 2.9E-15 9.9E-20 160.1 13.8 168 45-212 2-230 (259)
322 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.5E-14 5.2E-19 151.2 19.0 171 51-221 6-221 (223)
323 2dru_A Chimera of CD48 antigen 99.6 8E-15 2.8E-19 148.6 16.3 154 52-223 6-177 (180)
324 2gki_A Nuclease; anti-DNA anti 99.6 1.5E-14 5.3E-19 157.8 19.7 179 236-414 29-275 (291)
325 2fbj_H IGA-kappa J539 FAB (hea 99.6 1.3E-14 4.5E-19 151.4 18.1 167 51-218 6-212 (220)
326 2fbj_H IGA-kappa J539 FAB (hea 99.6 1E-14 3.5E-19 152.2 17.0 164 236-402 7-212 (220)
327 2gjj_A A21 single-chain antibo 99.6 1.3E-14 4.4E-19 156.1 18.2 168 230-397 6-239 (264)
328 3bae_H WO2 IGG2A FAB fragment 99.6 8E-15 2.7E-19 153.8 16.1 171 52-223 7-222 (228)
329 3bae_H WO2 IGG2A FAB fragment 99.6 5.6E-15 1.9E-19 155.0 14.8 169 236-405 7-220 (228)
330 1op3_H FAB 2G12, heavy chain; 99.6 4.1E-15 1.4E-19 155.7 13.6 164 236-402 7-216 (225)
331 1gsm_A Madcam-1, mucosal addre 99.6 4.4E-14 1.5E-18 146.5 20.2 160 148-313 17-199 (210)
332 3shs_A HOC head outer capsid p 99.6 1.5E-13 5E-18 144.2 23.9 240 47-304 4-279 (304)
333 2v5y_A Receptor-type tyrosine- 99.6 3.1E-13 1.1E-17 166.5 31.2 395 8-412 123-562 (731)
334 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.5E-14 5.3E-19 155.5 17.1 169 229-397 15-254 (268)
335 1gsm_A Madcam-1, mucosal addre 99.6 7.2E-14 2.5E-18 144.8 21.0 156 239-403 17-197 (210)
336 1dn0_B IGM-kappa cold agglutin 99.6 1.9E-14 6.6E-19 151.6 17.1 176 236-411 7-227 (232)
337 4ei6_B Vbeta16 XV19 type II na 99.6 1.4E-14 4.7E-19 153.1 15.8 172 46-218 3-221 (245)
338 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.6E-14 5.6E-19 155.3 16.3 170 44-213 14-254 (268)
339 3knb_B Obscurin-like protein 1 99.6 1.1E-14 3.7E-19 134.7 12.4 93 321-413 12-107 (107)
340 1hxm_B Gamma-delta T-cell rece 99.6 2.8E-14 9.6E-19 151.1 17.2 177 47-225 3-227 (242)
341 4ei6_B Vbeta16 XV19 type II na 99.6 2E-14 6.7E-19 151.9 15.9 169 231-400 4-219 (245)
342 3nfj_J T cell receptor beta ch 99.6 3.2E-14 1.1E-18 150.4 17.6 171 48-218 4-221 (245)
343 3q5y_A TCR N15 beta; IG, T cel 99.6 2.1E-14 7.1E-19 151.4 15.7 170 47-217 4-214 (240)
344 3pl6_D MBP peptide / T-cell re 99.6 1.7E-14 5.8E-19 154.8 15.1 171 46-217 27-242 (268)
345 3pl6_D MBP peptide / T-cell re 99.6 2.1E-14 7.3E-19 154.0 15.7 171 139-310 27-243 (268)
346 2w59_A IGY FCU3-4; immunoglobu 99.6 5.2E-15 1.8E-19 155.9 10.7 167 234-400 18-217 (231)
347 3q5y_A TCR N15 beta; IG, T cel 99.6 2.8E-14 9.6E-19 150.4 15.9 168 232-400 5-213 (240)
348 3nl4_H Antigen binding fragmen 99.6 2.1E-14 7.3E-19 148.7 14.7 175 50-225 4-212 (215)
349 3m8o_H Immunoglobulin A1 heavy 99.6 6.1E-14 2.1E-18 146.0 18.2 163 236-402 7-214 (221)
350 2gki_A Nuclease; anti-DNA anti 99.6 6.4E-14 2.2E-18 152.9 19.2 165 50-214 27-258 (291)
351 1dn0_B IGM-kappa cold agglutin 99.6 7.1E-14 2.4E-18 147.2 18.8 175 144-319 6-227 (232)
352 1l6x_A Immunoglobulin gamma-1 99.6 1.3E-14 4.4E-19 149.9 12.8 157 242-399 16-196 (207)
353 3fku_X Neutralizing antibody F 99.6 2E-14 6.9E-19 156.0 14.9 177 236-413 7-252 (280)
354 1l6x_A Immunoglobulin gamma-1 99.6 8.2E-15 2.8E-19 151.3 11.2 171 46-216 2-197 (207)
355 2w59_A IGY FCU3-4; immunoglobu 99.6 6.5E-15 2.2E-19 155.2 10.3 172 45-216 12-217 (231)
356 3nfj_J T cell receptor beta ch 99.6 4.5E-14 1.5E-18 149.2 16.7 170 232-401 4-220 (245)
357 3liz_H 4C3 monoclonal antibody 99.6 4.3E-14 1.5E-18 150.8 16.5 174 51-226 6-219 (253)
358 2xqy_G A13-D6.3 monoclonal ant 99.5 6.9E-14 2.3E-18 150.5 17.9 168 49-217 10-215 (261)
359 4acp_A IG gamma-1 chain C regi 99.5 7.2E-15 2.5E-19 156.2 10.0 193 21-215 1-217 (240)
360 1i1c_A IGG2A, IG gamma-2A chai 99.5 1E-14 3.5E-19 154.8 10.8 167 233-400 20-211 (239)
361 4acp_A IG gamma-1 chain C regi 99.5 6.7E-15 2.3E-19 156.5 9.1 192 204-398 1-216 (240)
362 3shs_A HOC head outer capsid p 99.5 6.3E-13 2.2E-17 139.4 23.6 242 139-396 3-279 (304)
363 1i1c_A IGG2A, IG gamma-2A chai 99.5 1.4E-14 4.8E-19 153.8 11.4 170 47-216 18-211 (239)
364 2xqy_G A13-D6.3 monoclonal ant 99.5 4.1E-14 1.4E-18 152.2 15.3 167 235-402 12-216 (261)
365 2wbj_D OB TCR; transmembrane, 99.5 2.8E-14 9.6E-19 154.5 14.0 174 45-218 24-247 (279)
366 3liz_H 4C3 monoclonal antibody 99.5 3.6E-14 1.2E-18 151.4 14.5 173 144-318 6-219 (253)
367 3m8o_H Immunoglobulin A1 heavy 99.5 1.7E-13 5.7E-18 142.6 19.0 162 144-310 6-214 (221)
368 3fku_X Neutralizing antibody F 99.5 5.5E-14 1.9E-18 152.5 15.9 162 52-214 7-234 (280)
369 3nl4_H Antigen binding fragmen 99.5 2.5E-14 8.5E-19 148.3 12.5 171 143-315 4-210 (215)
370 1hxm_B Gamma-delta T-cell rece 99.5 6.6E-14 2.3E-18 148.2 16.0 176 140-317 3-227 (242)
371 2wbj_D OB TCR; transmembrane, 99.5 6.4E-14 2.2E-18 151.7 15.7 171 230-400 25-245 (279)
372 1c5d_H Monoclonal antibody aga 99.5 4.5E-14 1.5E-18 146.7 13.5 167 236-405 7-210 (215)
373 1c5d_H Monoclonal antibody aga 99.5 7.6E-14 2.6E-18 144.9 14.4 168 51-221 6-210 (215)
374 3bn9_D E2 FAB heavy chain; ant 99.5 4.7E-14 1.6E-18 151.5 12.4 167 51-218 6-221 (257)
375 3knb_B Obscurin-like protein 1 99.5 6.5E-14 2.2E-18 129.5 11.6 92 44-135 12-105 (107)
376 3o3u_N Maltose-binding peripla 99.5 9.1E-14 3.1E-18 166.2 16.0 162 53-216 374-566 (581)
377 3o3u_N Maltose-binding peripla 99.5 9.4E-14 3.2E-18 166.1 15.6 165 147-311 375-569 (581)
378 3knb_A Titin; IG-like, titin, 99.5 9.9E-14 3.4E-18 126.5 11.9 91 321-411 4-99 (100)
379 3bn9_D E2 FAB heavy chain; ant 99.5 4.6E-14 1.6E-18 151.6 10.7 164 236-402 7-221 (257)
380 2cqv_A MLCK, myosin light chai 99.5 3.7E-13 1.3E-17 125.1 13.7 98 321-418 6-106 (114)
381 3knb_A Titin; IG-like, titin, 99.5 1.3E-13 4.6E-18 125.6 10.4 91 45-135 5-99 (100)
382 1oga_E TRBC1, T-cell receptor 99.5 2.5E-13 8.4E-18 144.8 14.0 171 47-218 5-220 (252)
383 3to4_D NKT vbeta2 (mouse varia 99.5 2E-13 6.8E-18 145.5 13.0 165 234-398 6-217 (253)
384 3to4_D NKT vbeta2 (mouse varia 99.5 4.6E-13 1.6E-17 142.6 15.0 168 142-309 5-220 (253)
385 1oga_E TRBC1, T-cell receptor 99.4 6.3E-13 2.2E-17 141.6 15.3 168 232-400 6-218 (252)
386 1bec_A 14.3.D T cell antigen r 99.4 6.4E-13 2.2E-17 140.1 15.2 167 48-215 2-211 (238)
387 1bec_A 14.3.D T cell antigen r 99.4 5.6E-13 1.9E-17 140.6 14.6 165 233-398 3-210 (238)
388 1ypz_F T-cell receptor gamma c 99.4 6.4E-13 2.2E-17 139.7 14.3 167 48-217 4-217 (230)
389 3tv3_H PGT128 heavy chain, IG 99.4 6.4E-13 2.2E-17 140.5 14.1 175 51-226 6-236 (239)
390 3tv3_H PGT128 heavy chain, IG 99.4 4.3E-13 1.5E-17 141.8 12.3 172 236-410 7-236 (239)
391 3qp3_A Titin; I-SET IG-like, s 99.4 1.4E-12 4.8E-17 118.5 13.3 92 321-412 7-101 (103)
392 3irg_B Obscurin-like protein 1 99.4 9.9E-13 3.4E-17 120.3 12.4 93 321-413 12-107 (107)
393 2aty_A Complement receptor chi 99.4 1.2E-12 4.1E-17 148.4 15.6 159 241-399 180-361 (376)
394 1ow0_A IG alpha-1 chain C regi 99.4 3.3E-14 1.1E-18 147.8 2.4 165 232-399 7-199 (214)
395 2aty_A Complement receptor chi 99.4 1.3E-12 4.5E-17 148.1 15.6 167 49-215 171-361 (376)
396 3qhz_H Human monoclonal antibo 99.4 6E-13 2E-17 139.7 11.9 174 52-226 7-228 (232)
397 3qhz_H Human monoclonal antibo 99.4 4.8E-13 1.6E-17 140.5 11.1 171 237-410 8-228 (232)
398 1ow0_A IG alpha-1 chain C regi 99.4 4.2E-14 1.4E-18 147.0 2.8 167 47-216 6-200 (214)
399 2edj_A Roundabout homolog 2; K 99.4 5.6E-13 1.9E-17 120.6 9.7 93 320-412 6-99 (100)
400 1g1c_A Immunoglobulin-like dom 99.4 1.4E-12 5E-17 117.4 12.3 91 321-411 4-98 (99)
401 1ypz_F T-cell receptor gamma c 99.4 1.6E-12 5.5E-17 136.6 14.2 169 141-311 4-219 (230)
402 3n9g_H FAB fragment of MAB CR4 99.4 6.7E-12 2.3E-16 131.7 18.7 174 51-227 6-225 (230)
403 2eo9_A Roundabout homolog 1; b 99.4 7.3E-13 2.5E-17 123.9 10.1 110 44-154 7-117 (118)
404 2kkq_A Myotilin; unknown funct 99.4 2E-12 6.8E-17 121.0 13.0 94 321-414 14-112 (116)
405 3puc_A Titin; I-SET IG-like do 99.4 3E-12 1E-16 115.2 13.2 91 321-411 5-98 (99)
406 3kvq_A Vascular endothelial gr 99.4 7E-13 2.4E-17 121.5 8.8 101 37-137 2-102 (108)
407 3u2s_H PG9 heavy chain; greek 99.4 4.9E-12 1.7E-16 134.8 16.6 176 50-226 4-237 (248)
408 2kdg_A Myotilin; immonoglobuli 99.4 2E-12 6.9E-17 116.7 11.1 92 321-412 4-99 (100)
409 1u2h_A APEG-1, aortic preferen 99.4 3.5E-12 1.2E-16 114.8 12.6 91 321-411 4-98 (99)
410 3qp3_A Titin; I-SET IG-like, s 99.4 2.7E-12 9.3E-17 116.6 11.9 94 42-135 5-100 (103)
411 2cqv_A MLCK, myosin light chai 99.4 3.2E-12 1.1E-16 118.7 12.5 95 44-138 6-102 (114)
412 3n9g_H FAB fragment of MAB CR4 99.4 4.7E-12 1.6E-16 132.8 15.4 171 236-411 7-225 (230)
413 1wit_A Twitchin 18TH IGSF modu 99.4 2E-12 7E-17 115.4 10.6 89 322-410 2-93 (93)
414 1g1c_A Immunoglobulin-like dom 99.4 4.3E-12 1.5E-16 114.3 12.6 92 44-135 4-98 (99)
415 3kvq_A Vascular endothelial gr 99.4 9.5E-13 3.2E-17 120.6 8.4 100 315-414 3-103 (108)
416 1wit_A Twitchin 18TH IGSF modu 99.4 1.9E-12 6.4E-17 115.6 9.9 89 45-133 2-92 (93)
417 2eo9_A Roundabout homolog 1; b 99.4 2.2E-12 7.6E-17 120.6 10.8 94 321-414 7-101 (118)
418 2yr3_A Myosin light chain kina 99.4 1.1E-12 3.9E-17 118.3 8.2 90 321-410 10-99 (99)
419 3puc_A Titin; I-SET IG-like do 99.3 5.4E-12 1.9E-16 113.5 12.3 92 44-135 5-98 (99)
420 3irg_A Titin; IG-like, titin, 99.3 4.7E-12 1.6E-16 113.9 11.6 91 321-411 4-99 (100)
421 1fhg_A Telokin; immunoglobulin 99.3 3.9E-12 1.3E-16 125.1 12.0 99 318-416 37-139 (154)
422 3u2s_H PG9 heavy chain; greek 99.3 5.1E-12 1.7E-16 134.7 13.5 174 143-317 4-236 (248)
423 3iu4_H CHP3 FAB heavy chain; a 99.3 4.4E-12 1.5E-16 136.5 13.0 170 52-224 7-221 (263)
424 2kdg_A Myotilin; immonoglobuli 99.3 4E-12 1.4E-16 114.7 10.6 92 44-135 4-98 (100)
425 3irg_B Obscurin-like protein 1 99.3 6.6E-12 2.2E-16 114.8 11.5 94 42-135 10-105 (107)
426 3sob_H Antibody heavy chain, l 99.3 2E-11 6.8E-16 130.3 17.0 172 52-226 30-250 (256)
427 1u2h_A APEG-1, aortic preferen 99.3 1.1E-11 3.8E-16 111.5 12.6 92 44-135 4-98 (99)
428 2dm3_A KIAA0992 protein, palla 99.3 2.6E-12 8.9E-17 118.2 8.5 94 321-414 8-105 (110)
429 2ckn_A Basic fibroblast growth 99.3 4.7E-12 1.6E-16 113.6 10.0 88 321-410 8-95 (95)
430 2kkq_A Myotilin; unknown funct 99.3 8.7E-12 3E-16 116.6 12.0 96 43-138 13-112 (116)
431 1ypz_E T cell receptor delta, 99.3 1.8E-11 6E-16 126.6 15.1 163 141-309 4-199 (207)
432 2dm2_A Palladin; beta-sandwich 99.3 5.1E-12 1.7E-16 116.4 9.5 94 321-414 7-105 (110)
433 2yuz_A Myosin-binding protein 99.3 4.2E-12 1.4E-16 115.6 8.6 90 321-414 6-98 (100)
434 3mlr_H Human monoclonal anti-H 99.3 2.7E-11 9.3E-16 126.8 16.1 169 52-223 7-222 (226)
435 1waa_A Titin; metal binding pr 99.3 1.3E-11 4.3E-16 110.9 11.5 87 321-412 4-93 (93)
436 2edj_A Roundabout homolog 2; K 99.3 8.2E-12 2.8E-16 112.8 10.4 91 44-135 7-98 (100)
437 1nct_A Titin; cell adhesion, g 99.3 2.7E-12 9.2E-17 118.0 7.1 91 320-410 12-105 (106)
438 2bk8_A Connectin, M1, titin he 99.3 2.5E-11 8.7E-16 109.0 13.3 88 325-412 4-95 (97)
439 1wwb_X Protein (brain derived 99.3 1.3E-11 4.5E-16 112.8 11.5 91 321-414 3-101 (103)
440 1ypz_E T cell receptor delta, 99.3 2E-11 7E-16 126.2 13.5 161 232-402 4-200 (207)
441 3cx2_A Myosin-binding protein 99.3 1.9E-11 6.6E-16 112.5 11.8 90 321-410 3-107 (108)
442 3iu4_H CHP3 FAB heavy chain; a 99.3 1.4E-11 4.8E-16 132.5 12.6 167 145-314 7-219 (263)
443 3sob_H Antibody heavy chain, l 99.3 1.9E-11 6.5E-16 130.5 13.4 168 238-410 32-250 (256)
444 1iam_A ICAM-1, CD54, intercell 99.3 8E-11 2.7E-15 119.4 17.0 158 142-307 3-166 (185)
445 2bk8_A Connectin, M1, titin he 99.3 4.2E-11 1.4E-15 107.6 13.4 88 48-135 4-94 (97)
446 1he7_A High affinity nerve gro 99.3 2.9E-11 9.9E-16 114.6 12.8 81 334-414 12-102 (126)
447 2yuz_A Myosin-binding protein 99.3 1.3E-11 4.6E-16 112.3 9.9 89 44-136 6-96 (100)
448 2yr3_A Myosin light chain kina 99.3 7.1E-12 2.4E-16 113.0 7.9 91 42-133 8-98 (99)
449 2e7c_A Myosin-binding protein 99.3 2E-11 7E-16 114.0 11.2 92 321-413 20-117 (118)
450 1fhg_A Telokin; immunoglobulin 99.3 1.6E-11 5.6E-16 120.6 11.0 97 40-136 36-135 (154)
451 2dm3_A KIAA0992 protein, palla 99.3 9.3E-12 3.2E-16 114.5 8.4 95 44-138 8-105 (110)
452 1waa_A Titin; metal binding pr 99.3 3.5E-11 1.2E-15 108.0 11.8 87 44-135 4-92 (93)
453 3irg_A Titin; IG-like, titin, 99.2 2.6E-11 8.9E-16 108.9 10.8 90 45-134 5-98 (100)
454 3mlr_H Human monoclonal anti-H 99.2 2.5E-11 8.7E-16 127.0 12.1 167 236-407 7-222 (226)
455 2ckn_A Basic fibroblast growth 99.2 1.8E-11 6.2E-16 109.8 9.5 87 44-133 8-94 (95)
456 2cry_A KIN of IRRE-like protei 99.2 1.7E-12 5.8E-17 122.2 2.7 102 310-414 4-116 (122)
457 2dm2_A Palladin; beta-sandwich 99.2 2.2E-11 7.5E-16 112.1 9.8 95 43-137 6-104 (110)
458 2edh_A Obscurin; structural ge 99.2 3.4E-11 1.2E-15 111.5 11.1 101 307-414 5-108 (113)
459 1nct_A Titin; cell adhesion, g 99.2 1E-11 3.4E-16 114.2 7.2 91 44-134 13-105 (106)
460 2e7c_A Myosin-binding protein 99.2 3.9E-11 1.3E-15 112.1 11.3 91 44-135 20-115 (118)
461 1wwc_A Protein (NT-3 growth fa 99.2 4.5E-11 1.5E-15 111.7 11.1 95 317-414 3-104 (118)
462 3caf_A Fibroblast growth facto 99.2 3.1E-11 1E-15 108.9 9.5 88 322-409 4-99 (100)
463 1gxe_A Myosin binding protein 99.2 2.4E-11 8.3E-16 117.7 9.3 82 329-410 25-138 (139)
464 1iam_A ICAM-1, CD54, intercell 99.2 2.4E-10 8.3E-15 115.9 17.0 157 234-399 4-166 (185)
465 2dav_A SLOW MYBP-C, myosin-bin 99.2 4.9E-11 1.7E-15 113.1 10.9 90 322-411 7-111 (126)
466 1x44_A Myosin-binding protein 99.2 5.4E-11 1.8E-15 108.3 10.6 88 322-414 7-99 (103)
467 2edf_A Obscurin; beta-sandwich 99.2 4.2E-11 1.4E-15 108.8 9.7 89 321-414 7-98 (103)
468 3caf_A Fibroblast growth facto 99.2 3.8E-11 1.3E-15 108.3 9.0 89 45-133 4-99 (100)
469 1wwb_X Protein (brain derived 99.2 9.1E-11 3.1E-15 107.2 11.4 93 42-137 1-100 (103)
470 3cx2_A Myosin-binding protein 99.2 1.3E-10 4.5E-15 106.8 12.4 90 45-134 4-107 (108)
471 2cr3_A Basic fibroblast growth 99.2 5.8E-11 2E-15 107.4 9.8 83 329-413 10-92 (99)
472 3u1s_H FAB PGT145 heavy chain; 99.2 1.8E-10 6E-15 124.0 14.7 171 52-225 30-263 (267)
473 2e6p_A Obscurin-like protein 1 99.2 4.7E-11 1.6E-15 108.7 8.6 89 321-414 6-100 (104)
474 2edn_A Myosin-binding protein 99.2 3.4E-11 1.2E-15 112.9 7.7 91 322-412 12-117 (118)
475 2lu7_A Obscurin-like protein 1 99.2 5E-11 1.7E-15 104.9 8.4 78 330-412 4-84 (84)
476 3bfo_A Mucosa-associated lymph 99.2 1.2E-10 4E-15 103.5 10.8 84 322-411 3-87 (91)
477 1gl4_B Basement membrane-speci 99.2 1.3E-10 4.3E-15 104.6 10.9 81 328-410 16-97 (98)
478 2dav_A SLOW MYBP-C, myosin-bin 99.2 1.4E-10 4.6E-15 110.1 11.6 91 45-135 7-111 (126)
479 1x44_A Myosin-binding protein 99.2 1.1E-10 3.9E-15 106.1 10.7 89 45-138 7-99 (103)
480 2lvc_A Obscurin-like protein 1 99.2 4.8E-11 1.6E-15 106.7 7.8 84 321-409 3-91 (91)
481 2lu7_A Obscurin-like protein 1 99.2 8.3E-11 2.8E-15 103.5 9.1 79 52-135 3-83 (84)
482 3f8u_B Tapasin; endoplasmic re 99.2 2E-09 6.8E-14 121.3 22.5 163 50-214 163-388 (401)
483 2dlt_A Myosin binding protein 99.2 4.9E-11 1.7E-15 109.2 7.8 89 321-412 7-98 (106)
484 3m45_A Cell adhesion molecule 99.2 1.3E-10 4.6E-15 105.8 10.6 92 321-413 5-108 (108)
485 2eny_A Obscurin; beta-sandwich 99.1 5.6E-11 1.9E-15 108.9 8.0 90 321-414 7-100 (104)
486 2yuv_A Myosin-binding protein 99.1 2.3E-10 8E-15 103.4 12.1 88 321-413 6-97 (100)
487 1wwc_A Protein (NT-3 growth fa 99.1 9.9E-11 3.4E-15 109.3 9.8 95 39-136 2-102 (118)
488 2edf_A Obscurin; beta-sandwich 99.1 8.4E-11 2.9E-15 106.8 9.0 89 44-137 7-97 (103)
489 1gxe_A Myosin binding protein 99.1 7.3E-11 2.5E-15 114.3 9.0 84 51-134 24-138 (139)
490 3bfo_A Mucosa-associated lymph 99.1 2E-10 6.7E-15 102.0 11.2 83 45-134 3-86 (91)
491 2lvc_A Obscurin-like protein 1 99.1 1.1E-10 3.7E-15 104.4 9.0 83 45-132 4-90 (91)
492 4hwu_A Fibroblast growth facto 99.1 2.3E-10 7.8E-15 102.4 11.1 83 328-413 7-89 (95)
493 2edh_A Obscurin; structural ge 99.1 2.8E-10 9.7E-15 105.2 12.0 100 214-319 4-105 (113)
494 2v9t_A Roundabout homolog 1; s 99.1 1.4E-10 4.9E-15 107.8 9.9 93 320-412 7-110 (117)
495 2cr6_A KIAA1556 protein, obscu 99.1 3.7E-11 1.3E-15 111.9 5.7 100 313-417 5-108 (115)
496 3bn3_B ICAM-5, intercellular a 99.1 5.2E-10 1.8E-14 114.4 14.3 160 140-307 4-174 (196)
497 2e6p_A Obscurin-like protein 1 99.1 1.2E-10 4.1E-15 106.0 8.6 88 44-136 6-98 (104)
498 2dlt_A Myosin binding protein 99.1 1E-10 3.5E-15 107.0 8.1 88 44-134 7-96 (106)
499 3so5_A LIG-3, leucine-rich rep 99.1 4.5E-10 1.6E-14 102.4 12.2 90 320-409 8-111 (112)
500 1hxm_A Gamma-delta T-cell rece 99.1 6.7E-10 2.3E-14 116.9 15.1 159 233-400 5-199 (229)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=7e-53 Score=506.12 Aligned_cols=482 Identities=25% Similarity=0.438 Sum_probs=388.7
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEe---CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVN---APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD 82 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~---~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd 82 (940)
+..+|+|.+++.+|+|.|+|.|.|..|.......+.|. .+|.+...+.++.+.+|+++.|.|.+.|.|++.|+|+|+
T Consensus 59 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~ 138 (570)
T 3b43_A 59 NVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKD 138 (570)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEET
T ss_pred CEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEEC
Confidence 45789999999999999999999999988777777775 367888888888999999999999999999999999999
Q ss_pred CEeecCCCCeEEE--eeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecc-cCCeeEecCCceeecCCCcEEEE
Q psy11143 83 GNSLDSDDHVTYE--HDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIP 159 (940)
Q Consensus 83 g~~I~~~~~~~~~--~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~ 159 (940)
|..+......... .....|.|.++..+|+|.|+|.|.|..|.....+.+.|... .+|.+...+....+.+|++++|.
T Consensus 139 g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~ 218 (570)
T 3b43_A 139 GELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFK 218 (570)
T ss_dssp TEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEE
T ss_pred CEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEE
Confidence 9999766555433 33456899999999999999999999998888888888754 34667778888889999999999
Q ss_pred EEeCCCCCCeEEEeeCCeeccccCceEEe---eeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCC
Q psy11143 160 CKPDGEPLPRISWSKDEAEFVEDRNHKIH---RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRP 236 (940)
Q Consensus 160 C~v~g~P~p~ItW~k~g~~i~~~~~~~~~---~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p 236 (940)
|.+.|.|.+.++|++++..+....++.+. ....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|. .+|.+....
T Consensus 219 C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~-~~p~~~~~~ 297 (570)
T 3b43_A 219 CHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ-EPPRFIKKL 297 (570)
T ss_dssp EEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCB-CCCEEEECC
T ss_pred EEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEee-cCCcccccC
Confidence 99999999999999999988766655443 23579999999999999999999999999999999998 556655443
Q ss_pred -CeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEee--cCeEEEEeeeccCCCeEEEEEEEeCCCCceeEE
Q psy11143 237 -VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH--DGFVLVLNGVRESDAGVYNCVAQNSEGSAESVA 313 (940)
Q Consensus 237 -~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~--~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~ 313 (940)
....+.+|+.+.|.|.+.|.|.|.++|+|++..+....++.+.. ....|.|.++..+|+|.|+|.|.|..|....++
T Consensus 298 ~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 377 (570)
T 3b43_A 298 EPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSST 377 (570)
T ss_dssp CSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEE
T ss_pred CCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEE
Confidence 34567899999999999999999999999999998777665443 334699999999999999999999999988888
Q ss_pred EEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeee---ceEEEecCCCCCCeEE
Q psy11143 314 MIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT---GSLRLYNIGPQDSGLY 390 (940)
Q Consensus 314 ~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~---~sL~I~~v~~~D~G~Y 390 (940)
.|.|. .+|.+...|....+.+|++++|.|.+.|.|.|.|+|+|++..+..+.++.+..+ ++|.|.++..+|+|.|
T Consensus 378 ~l~V~--~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 455 (570)
T 3b43_A 378 SLKVK--EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEY 455 (570)
T ss_dssp EECEE--CCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred EEEec--CCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEE
Confidence 77775 688888888888899999999999999999999999999999987777776554 3799999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEecCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCccc---
Q psy11143 391 RCTASNLLGEDVAEGYLTVTGENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNEQ--- 467 (940)
Q Consensus 391 tC~A~N~~G~~~~s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~~--- 467 (940)
+|.|.|..|.....+.|.|..+|..... +.......++.... .|.....+.+ +++|++++.....
T Consensus 456 ~C~A~N~~G~~~~~~~l~v~~~P~~~~~------~~~~~~~~g~~~~l----~c~~~g~p~~--~v~W~k~~~~~~~~~~ 523 (570)
T 3b43_A 456 QCKASNDVGSDTCVGSITLKAPPRFVKK------LSDISTVVGEEVQL----QATIEGAEPI--SVAWFKDKGEIVRESD 523 (570)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCEEEEC------CCCBCCBTTCCEEE----EEEEESCSSC--CCEEEETTEECCCCTT
T ss_pred EEEEEECCCeEEEEEEEEeccCCccccc------CCCceecCCCeEEE----EEEEecCCCC--EEEEEeCCeEeccCCC
Confidence 9999999999999999999887653322 22223344555433 3444334433 5678887632210
Q ss_pred ---cccccceeeee----ccCCccceeeeccchhhhhheeeE
Q psy11143 468 ---QDHGSLMKLLR----FPDESARTVVRAADVYERTLSHIK 502 (940)
Q Consensus 468 ---~~~~~ll~l~r----~p~~~~~~~~~Aa~~fg~t~~~i~ 502 (940)
....+-...|. .+.|.|.|.|.|.+.+|.......
T Consensus 524 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~ 565 (570)
T 3b43_A 524 NIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFAT 565 (570)
T ss_dssp TEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEE
T ss_pred eEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEE
Confidence 00001111222 245789999999999997754443
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4e-50 Score=482.19 Aligned_cols=399 Identities=28% Similarity=0.497 Sum_probs=346.1
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEe---CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVN---APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG 83 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~---~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg 83 (940)
..+|.|.+++.+|+|.|+|.|.|..|.......+.|. .||.+...|....+.+|+.++|.|.+.|.|++.|+|+|+|
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g 235 (570)
T 3b43_A 156 VATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDN 235 (570)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETT
T ss_pred EEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECC
Confidence 4789999999999999999999999988777777664 4788888888889999999999999999999999999999
Q ss_pred EeecCCCCeEEE--eeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCC-ceeecCCCcEEEEE
Q psy11143 84 NSLDSDDHVTYE--HDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF-DMRAPAGSSVEIPC 160 (940)
Q Consensus 84 ~~I~~~~~~~~~--~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~-~~~v~~Ge~vtL~C 160 (940)
..+....+.++. .+...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. +|.+..... ...+.+|+.+.|.|
T Consensus 236 ~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~--~p~~~~~~~~~~~v~~g~~~~l~C 313 (570)
T 3b43_A 236 REIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE--PPRFIKKLEPSRIVKQDEHTRYEC 313 (570)
T ss_dssp EECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBC--CCEEEECCCSBCCEESSCEEEEEE
T ss_pred EECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeec--CCcccccCCCccEEcCCCcEEEEE
Confidence 999877666554 3345689999999999999999999999877777776654 566655443 34678999999999
Q ss_pred EeCCCCCCeEEEeeCCeeccccCceEEee---eceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCC
Q psy11143 161 KPDGEPLPRISWSKDEAEFVEDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPV 237 (940)
Q Consensus 161 ~v~g~P~p~ItW~k~g~~i~~~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~ 237 (940)
.+.|.|.+.+.|++++..+....++.... .+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|. .+|.+...+.
T Consensus 314 ~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~-~~P~~~~~~~ 392 (570)
T 3b43_A 314 KIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-EPPVFRKKPH 392 (570)
T ss_dssp EEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEE-CCCEECSCCC
T ss_pred EEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEec-CCCeeecCCC
Confidence 99999999999999999987766654432 3469999999999999999999999999999999998 6788888888
Q ss_pred eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecC--eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEE
Q psy11143 238 STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMI 315 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g--~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l 315 (940)
...+.+|+.+.|.|.+.|.|.|.|+|+|+|..+..+.++.+..++ .+|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 393 ~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 472 (570)
T 3b43_A 393 PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472 (570)
T ss_dssp CEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 888999999999999999999999999999999887777765554 459999999999999999999999998887777
Q ss_pred EEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeec-cCCcEEEee---eceEEEecCCCCCCeEEE
Q psy11143 316 RINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV-EDRNHKIHR---TGSLRLYNIGPQDSGLYR 391 (940)
Q Consensus 316 ~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~-~~~~~~i~~---~~sL~I~~v~~~D~G~Yt 391 (940)
.|. .+|.+...+.+..+.+|+.+.|.|.+.|.|.|.|.|+|++..+. .+.++.+.. .++|.|.++..+|+|.|+
T Consensus 473 ~v~--~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 550 (570)
T 3b43_A 473 TLK--APPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYT 550 (570)
T ss_dssp EEC--CCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEE
T ss_pred Eec--cCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEE
Confidence 775 68999998888899999999999999999999999999986654 344555532 358999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEe
Q psy11143 392 CTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 392 C~A~N~~G~~~~s~~L~V~ 410 (940)
|.|.|..|..+.++.|.|.
T Consensus 551 C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 551 CQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp EEEECSSCEEEEEEEECCB
T ss_pred EEEEECCcEEEEEEEEEEe
Confidence 9999999999999999875
No 3
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=7.9e-46 Score=462.69 Aligned_cols=477 Identities=23% Similarity=0.382 Sum_probs=373.2
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEee
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSL 86 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I 86 (940)
..+|+|.+++.+|+|.|+|.|.|..|..+..+.|.|..++.+...|....+.+|+.++|.|.+.|.|.+.|+|+|+|..+
T Consensus 305 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~ 384 (816)
T 3dmk_A 305 SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAI 384 (816)
T ss_dssp TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEEC
T ss_pred cceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEEC
Confidence 56899999999999999999999999888888899988888888899999999999999999999999999999999988
Q ss_pred cCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCCC
Q psy11143 87 DSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGE 165 (940)
Q Consensus 87 ~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~ 165 (940)
... ...|.|.+++.+|+|.|+|.|.|..|.....+.+.|... .+|.+...+....+.+|+.+.|.|.+.|.
T Consensus 385 ~~~--------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~ 456 (816)
T 3dmk_A 385 GHS--------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGN 456 (816)
T ss_dssp SCC--------SSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECS
T ss_pred CCC--------CCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecC
Confidence 643 245799999999999999999999998777777777653 45677777778889999999999999999
Q ss_pred CCCeEEEeeCCeeccccCceEEee--------eceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCC
Q psy11143 166 PLPRISWSKDEAEFVEDRNHKIHR--------TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPV 237 (940)
Q Consensus 166 P~p~ItW~k~g~~i~~~~~~~~~~--------~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~ 237 (940)
|.+.++|++++..+....++.... ...|.|.+++.+|+|.|+|.|.|..|.....+.|.|. .+|.+ ..+.
T Consensus 457 p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-~~p~~-~~~~ 534 (816)
T 3dmk_A 457 PTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVY-GLPYI-RQME 534 (816)
T ss_dssp SCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEEC-SSCEE-CCCC
T ss_pred CCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEe-cCCee-EccC
Confidence 999999999999887665554321 2359999999999999999999999999888999988 44433 3455
Q ss_pred eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeec-cCCCeEEEEEEEeCCCCceeEEEEE
Q psy11143 238 STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVR-ESDAGVYNCVAQNSEGSAESVAMIR 316 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~-~~DsG~YtC~A~N~~Gs~~~s~~l~ 316 (940)
...+..|+.+.|.|.+.+.|.+.+.|++++..+....+.....++. |.|.++. ..|+|.|+|.|.|..|.... ..+.
T Consensus 535 ~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~-l~i~~v~~~~d~G~Y~C~a~n~~g~~~~-~~~~ 612 (816)
T 3dmk_A 535 KKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGT-LIIENVERNSDQATYTCVAKNQEGYSAR-GSLE 612 (816)
T ss_dssp CEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSE-EEESSCCHHHHCEEEEEEEEESSSCEEE-EEEE
T ss_pred CeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCe-EEEEecCccccCEEEEEEEEECCCceee-eeEE
Confidence 6778899999999999999999999999999998877776666665 9999998 68999999999999886532 2334
Q ss_pred EeeccCCeEEE-cCCceeecCCCeEEEEEeecCcCCC-eEEEEeCCeeeccCCcEEEee----eceEEEecCCCCCCeEE
Q psy11143 317 INGHRAPRLVV-KPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHR----TGSLRLYNIGPQDSGLY 390 (940)
Q Consensus 317 V~~~~~P~i~~-~p~~~~v~~G~~vtL~C~v~g~P~p-~i~W~k~g~~i~~~~~~~i~~----~~sL~I~~v~~~D~G~Y 390 (940)
+.+..+|.+.. .+....+.+|+.++|.|.+.+.|.| .|.|+++|..+.......... .++|.|.++..+|+|.|
T Consensus 613 v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 692 (816)
T 3dmk_A 613 VQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNF 692 (816)
T ss_dssp EEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEE
T ss_pred EEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEE
Confidence 43335555443 2345568899999999999877665 999999999886554444432 35799999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEecCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCcc----
Q psy11143 391 RCTASNLLGEDVAEGYLTVTGENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNE---- 466 (940)
Q Consensus 391 tC~A~N~~G~~~~s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~---- 466 (940)
+|.|.|..|....++.|.|..+|.....| .......++... ..|.....+.. +++|.+++....
T Consensus 693 ~C~a~N~~g~~~~~~~l~V~~~P~~~~~~------~~~~v~~G~~v~----l~C~~~g~P~p--~i~W~k~~~~~~~~~~ 760 (816)
T 3dmk_A 693 TCHARNLAGHQQFTTPLNVYVPPRWILEP------TDKAFAQGSDAK----VECKADGFPKP--QVTWKKAVGDTPGEYK 760 (816)
T ss_dssp EEEEECSSCEEEEEEEECEEEEEEEEECC------CCEEEETTCCEE----EECEEEEESCC--EEECCEECSSSTTCCB
T ss_pred EEEEEeCCccEEEEEEEEEEeCCceeeec------ccceecCCCcEE----EEEEEecCCCC--eEEEEecCCCCCcccc
Confidence 99999999999999999998876532222 111222344433 34444444433 678888753211
Q ss_pred cc--------ccccceeeeeccCCccceeeeccchhhhhheeeEEEEee
Q psy11143 467 QQ--------DHGSLMKLLRFPDESARTVVRAADVYERTLSHIKKHIQA 507 (940)
Q Consensus 467 ~~--------~~~~ll~l~r~p~~~~~~~~~Aa~~fg~t~~~i~~~v~~ 507 (940)
.. ..+.|...-....+.|.|.|.|.+.+|.....+..++++
T Consensus 761 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~ 809 (816)
T 3dmk_A 761 DLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQ 809 (816)
T ss_dssp CCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEEE
T ss_pred ccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEee
Confidence 00 011121111123477999999999999987766555443
No 4
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=3.6e-45 Score=444.42 Aligned_cols=465 Identities=18% Similarity=0.310 Sum_probs=353.7
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCCceE-EEEEEEEEeCCC-eEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCE
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPAGVY-RGDLHVTVNAPP-IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGN 84 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~g~~-~~~v~l~V~~pP-~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~ 84 (940)
..+|+|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+| .+...|....+.+|+.++|.|.+.|+|.+.|+|+++|.
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~ 242 (642)
T 1e07_A 163 NRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGT 242 (642)
T ss_pred CCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCe
Confidence 5689999999999999999999988754 455778887443 45566777889999999999999999999999999999
Q ss_pred eecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEE--EEEEEecccCCeeEecCCceeecCCCcEEEEEEe
Q psy11143 85 SLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESV--AMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP 162 (940)
Q Consensus 85 ~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~--~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v 162 (940)
.+.. +..|.|.+++.+|+|.|+|.|.|..|..... ..|.|...+.+.+...+....+..|+++.|.|.+
T Consensus 243 ~i~~---------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~ 313 (642)
T 1e07_A 243 FQQS---------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEP 313 (642)
T ss_pred Eccc---------CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEEC
Confidence 8742 2347999999999999999999998876653 4455544333233333444556668889999999
Q ss_pred CCCCCCeEEEeeCCeeccccCceEEe-eeceEEEeecccCCCceEEEEEEcCCcce-eeeeeeeecCCCCeeeeCCCeeE
Q psy11143 163 DGEPLPRISWSKDEAEFVEDRNHKIH-RTGSLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVTGAPPIFIQRPVSTT 240 (940)
Q Consensus 163 ~g~P~p~ItW~k~g~~i~~~~~~~~~-~~~sL~I~~v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~~~p~~~~~p~~~~ 240 (940)
.+.| +.++|+++|..+....+..+. .++.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...|+.....+....
T Consensus 314 ~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~ 392 (642)
T 1e07_A 314 EIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTY 392 (642)
T ss_pred CCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceE
Confidence 9876 699999999988766665543 34689999999999999999999998864 45677888765655566677778
Q ss_pred EecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeec
Q psy11143 241 YSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGH 320 (940)
Q Consensus 241 v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~ 320 (940)
+.+|+.+.|.|.+.|.|.|.++|+++|..+... ..|.|.++..+|+|.|+|.|.|..|....+..+.|.+.
T Consensus 393 ~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~---------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~ 463 (642)
T 1e07_A 393 YRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT---------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVS 463 (642)
T ss_pred ecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC---------ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEe
Confidence 899999999999999999999999999887542 34999999999999999999999988776544444332
Q ss_pred ---cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee-eceEEEecCCCCCCeEEEEEEEe
Q psy11143 321 ---RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR-TGSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ---~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~-~~sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.+.. +....+.+|++++|.|.+.+ |.+.+.|+|+|..+....++.+.. +++|.|.++..+|+|.|+|.|.|
T Consensus 464 ~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 541 (642)
T 1e07_A 464 AELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQN 541 (642)
T ss_pred ccCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEc
Confidence 2444443 44567889999999999994 888999999999988777776654 45899999999999999999999
Q ss_pred CCeeEEE-EEEEEEecCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCcccccccccee
Q psy11143 397 LLGEDVA-EGYLTVTGENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNEQQDHGSLMK 475 (940)
Q Consensus 397 ~~G~~~~-s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~~~~~~~ll~ 475 (940)
..|.... .+.|.|..+|..+.. .+.......++.. ...|....++.. +++|++++.+... .+.|..
T Consensus 542 ~~g~~~s~~~~l~V~~~p~~~~~-----~~~~~~v~~g~~~----~l~C~~~g~p~p--~v~W~~~g~~i~~--~~~L~i 608 (642)
T 1e07_A 542 SVSANRSDPVTLDVLYGPDTPII-----SPPDSSYLSGANL----NLSCHSASNPSP--QYSWRINGIPQQH--TQVLFI 608 (642)
T ss_pred CCCCccCCCEEEEEEeCCCccee-----cCCceeEEcCCcE----EEEEEeccCCCC--eEEEEECCEECcc--CceEEE
Confidence 9997654 688999865432111 1112222334433 334555444443 7889999865531 122222
Q ss_pred eeeccCCccceeeeccchhhhhheeeEEEE
Q psy11143 476 LLRFPDESARTVVRAADVYERTLSHIKKHI 505 (940)
Q Consensus 476 l~r~p~~~~~~~~~Aa~~fg~t~~~i~~~v 505 (940)
.-..+.+.|.|.|.|.+.+|.........|
T Consensus 609 ~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V 638 (642)
T 1e07_A 609 AKITPNNNGTYACFVSNLATGRNNSIVKSI 638 (642)
T ss_pred CcccccCCeEEEEEEEecccCcceeEEEEE
Confidence 222345789999999999998765444443
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=6.4e-44 Score=433.39 Aligned_cols=459 Identities=20% Similarity=0.270 Sum_probs=340.4
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCC-ceEEEEEEEEEeC---CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPA-GVYRGDLHVTVNA---PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD 82 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~-g~~~~~v~l~V~~---pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd 82 (940)
+.+|.|.+++.+|+|.|+|.+.+.. +.....+.|.|.. +|.+.. +....+.+|+.+.|.|.+.+ |.+.|.|+++
T Consensus 70 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~ 147 (642)
T 1e07_A 70 NASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISS-NNSKPVEDKDAVAFTCEPET-QDATYLWWVN 147 (642)
T ss_pred CCcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEc-cCceeEecCCcEEEEEECCC-CCeeEEEEEC
Confidence 4689999999999999999999864 4445566677765 445444 33566889999999999998 8899999999
Q ss_pred CEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEE
Q psy11143 83 GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCK 161 (940)
Q Consensus 83 g~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~ 161 (940)
|..+....+..+...+..|.|.+++.+|+|.|+|.|.|..|...+ .+.|.|...+. ...+.+....+.+|+.+.|.|.
T Consensus 148 g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~-~~~~~~~~~~~~~G~~~~l~C~ 226 (642)
T 1e07_A 148 NQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPD-APTISPLNTSYRSGENLNLSCH 226 (642)
T ss_pred CeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCC-CcEEecCCcccccCCEEEEEEE
Confidence 999987777776666677899999999999999999998886543 56677764332 3345566778899999999999
Q ss_pred eCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceee--eeeeeecCCCC-eeeeCCCe
Q psy11143 162 PDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA--EGYLTVTGAPP-IFIQRPVS 238 (940)
Q Consensus 162 v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~--s~~L~V~~~~p-~~~~~p~~ 238 (940)
+.|.|.+.++|+++|..+.. ...|.|.+++.+|+|.|+|.|.|..|.... ...|.|...++ .....+..
T Consensus 227 ~~g~p~~~i~W~~~g~~i~~--------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~ 298 (642)
T 1e07_A 227 AASNPPAQYSWFVNGTFQQS--------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNS 298 (642)
T ss_pred cCCCCCcEEEEEECCeEccc--------CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCc
Confidence 99999999999999987632 357999999999999999999998886543 44566654322 22223344
Q ss_pred eEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce-eEEEEEE
Q psy11143 239 TTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE-SVAMIRI 317 (940)
Q Consensus 239 ~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~-~s~~l~V 317 (940)
..+..|+.+.|.|.+.+.| +.++|+++|..+....++.+...+..|.|.++..+|+|.|+|.|.|..|... ..+.|.|
T Consensus 299 ~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 377 (642)
T 1e07_A 299 NPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNV 377 (642)
T ss_pred eeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEE
Confidence 4566688899999999987 7999999999998887877776677799999999999999999999998753 3456666
Q ss_pred eeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeC
Q psy11143 318 NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 318 ~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.. .|+.+...+....+.+|+.++|.|.+.|.|.|.|+|+++|..+.. ...|.|.++..+|+|.|+|.|.|.
T Consensus 378 ~~-~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~--------~~~L~i~~~~~~d~G~Y~C~a~n~ 448 (642)
T 1e07_A 378 LY-GPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH--------TQELFISNITEKNSGLYTCQANNS 448 (642)
T ss_pred Ec-CCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC--------CceEEEccCChhhCeEEEEEEEcC
Confidence 53 233344556677889999999999999999999999999987643 346999999999999999999999
Q ss_pred CeeEEEEEE--EEEecCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCcccc-----c-
Q psy11143 398 LGEDVAEGY--LTVTGENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNEQQ-----D- 469 (940)
Q Consensus 398 ~G~~~~s~~--L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~~~-----~- 469 (940)
.|....+.. |.|..++. .|.... ........++.... .|... .+ ..++.|++++.+.... .
T Consensus 449 ~g~~~~s~~~~v~v~~~~~---~p~i~~-~~~~~v~~g~~v~l----~C~~~-~~--~~~i~W~~~g~~l~~~~~~~~~~ 517 (642)
T 1e07_A 449 ASGHSRTTVKTITVSAELP---KPSISS-NNSKPVEDKDAVAF----TCEPE-AQ--NTTYLWWVNGQSLPVSPRLQLSN 517 (642)
T ss_pred CCCCcccceEEEEEeccCC---CceEec-CCceeecCCCeEEE----EEECC-CC--CcEEEEEECCEeCCCCCcEEEcC
Confidence 998776644 44443221 111111 11111223444333 34443 22 3578899988544210 0
Q ss_pred cccceeeee-ccCCccceeeeccchhhhh
Q psy11143 470 HGSLMKLLR-FPDESARTVVRAADVYERT 497 (940)
Q Consensus 470 ~~~ll~l~r-~p~~~~~~~~~Aa~~fg~t 497 (940)
.+.-+.+.. ...+.|.|.|.|.+..|..
T Consensus 518 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 546 (642)
T 1e07_A 518 GNRTLTLFNVTRNDARAYVCGIQNSVSAN 546 (642)
T ss_pred CCcEEEEeecChhcCceEEEEeEcCCCCc
Confidence 011122222 2347799999999888754
No 6
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=2.5e-45 Score=434.87 Aligned_cols=397 Identities=17% Similarity=0.281 Sum_probs=303.1
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEE-CCE
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH-DGN 84 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~k-dg~ 84 (940)
...+|+|.+++.+|+|.|+|.+.| |. +..+.|.|..+|.+...+....+.+|+.++|.|.+.+.|.+.|+|++ +|.
T Consensus 78 ~~~~L~I~~~~~~D~G~Y~C~a~n--g~-~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~ 154 (524)
T 2ec8_A 78 KQNEWITEKAEATNTGKYTCTNKH--GL-SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGK 154 (524)
T ss_dssp CSSEEEESSCCSTTCEEEEEEETT--SC-EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSC
T ss_pred ccceEEEcccchhhCEEEEEeecC--Cc-ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCc
Confidence 468999999999999999999999 43 66788888888777777888899999999999999987778999998 888
Q ss_pred eecCCCCeEEEeeceEEEEcccccCCCe-EEEEEEEeCCCceEE-EEEEEEec--ccCCeeEecCCceeecCCCcEEEEE
Q psy11143 85 SLDSDDHVTYEHDGFVLVLNGVRESDAG-VYNCVAQNSEGSAES-VAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPC 160 (940)
Q Consensus 85 ~I~~~~~~~~~~~gs~L~I~~v~~~DsG-~YtC~a~n~~g~~~~-~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C 160 (940)
.+....+..+...+ .|.|.+++.+|+| .|+|.|.|..+...+ .+.|.|.. ..+|.+...+....+.+|++++|.|
T Consensus 155 ~l~~~~~~~~~~~~-~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C 233 (524)
T 2ec8_A 155 PLPKDLRFIPDPKA-GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTC 233 (524)
T ss_dssp CCCSSCEEEEETTT-EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEE
T ss_pred CcCCCCceeECCCc-cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEE
Confidence 88765555554444 4699999999999 999999998776544 66676652 2457888888888999999999999
Q ss_pred EeCCCCCCe-EEEeeCCeec--cccCce------EEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCe
Q psy11143 161 KPDGEPLPR-ISWSKDEAEF--VEDRNH------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPI 231 (940)
Q Consensus 161 ~v~g~P~p~-ItW~k~g~~i--~~~~~~------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~ 231 (940)
.+.+.|.+. ++|++++..+ ...... .....+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|. .+|.
T Consensus 234 ~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~-~~p~ 312 (524)
T 2ec8_A 234 TIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV-DKGF 312 (524)
T ss_dssp EEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEE-SSCE
T ss_pred EEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEe-ccCc
Confidence 999988886 9999998873 322211 23345689999999999999999999999998889999998 5555
Q ss_pred eeeCC---CeeEEecCCeEEEEEEEeeeCCCe-EEEEECCeecCCCC-ceEEeec------CeEEEEeeeccCCCeEEEE
Q psy11143 232 FIQRP---VSTTYSTGSTSRITCLVEGHPLPQ-MTWFHDGNSLDSDD-HVTYEHD------GFVLVLNGVRESDAGVYNC 300 (940)
Q Consensus 232 ~~~~p---~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k~g~~l~~~~-~~~~~~~------g~sL~I~~v~~~DsG~YtC 300 (940)
+...+ ....+.+|+.++|.|.+.|.|.|. ++|+++|..+.... ++....+ ..+|.|.++..+|+|.|+|
T Consensus 313 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 392 (524)
T 2ec8_A 313 INIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTF 392 (524)
T ss_dssp EEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEE
T ss_pred eEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEE
Confidence 55433 467899999999999999999998 99999999887665 2222222 2469999999999999999
Q ss_pred EEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeec--------cCCc---E
Q psy11143 301 VAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV--------EDRN---H 369 (940)
Q Consensus 301 ~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~--------~~~~---~ 369 (940)
.|.|..|....++.|.|. .+|.+...+. ..+| +|.|.+.|.|.|.|+|++++..+. .+.+ .
T Consensus 393 ~a~N~~g~~~~~~~l~V~--~~P~i~~~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 464 (524)
T 2ec8_A 393 LVSNSDVNAAIAFNVYVN--TKPEILTYDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNS 464 (524)
T ss_dssp EEECSSCEEEEEEEEEEC--EEEEEEEEEC---CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC
T ss_pred EEEecCceEEEEEEEEEe--cCCeEeeccc---CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeee
Confidence 999999998777777775 5787776553 3455 999999999999999999976652 1111 2
Q ss_pred EEeeeceEEE---ecC-CCCCCeEEEEEEEeCCeeEEEEEEEEEecCCCC
Q psy11143 370 KIHRTGSLRL---YNI-GPQDSGLYRCTASNLLGEDVAEGYLTVTGENSV 415 (940)
Q Consensus 370 ~i~~~~sL~I---~~v-~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~~ 415 (940)
.....+.+.+ .++ ..+|+|.|+|.|.|..|.....+.|.|++.+..
T Consensus 465 ~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~ 514 (524)
T 2ec8_A 465 SGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKE 514 (524)
T ss_dssp -CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC------
T ss_pred ccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHH
Confidence 2233455543 334 359999999999999999999999999987643
No 7
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=6.5e-44 Score=445.38 Aligned_cols=401 Identities=26% Similarity=0.487 Sum_probs=333.9
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEE---eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTV---NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD 82 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V---~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd 82 (940)
+..+|.|.+++.+|+|.|+|.|.|..|.......+.| ..+|.+...+....+.+|+.+.|.|.+.|+|.+.|+|+++
T Consensus 387 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~ 466 (816)
T 3dmk_A 387 SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELD 466 (816)
T ss_dssp CSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEET
T ss_pred CCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEEC
Confidence 4578999999999999999999999998777777777 3678888888888999999999999999999999999999
Q ss_pred CEeecCCCCeEEE----eec---eEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCc
Q psy11143 83 GNSLDSDDHVTYE----HDG---FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSS 155 (940)
Q Consensus 83 g~~I~~~~~~~~~----~~g---s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~ 155 (940)
|..+......... .++ ..|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. .| +...+....+.+|++
T Consensus 467 g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~--~p-~~~~~~~~~v~~G~~ 543 (816)
T 3dmk_A 467 GKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYG--LP-YIRQMEKKAIVAGET 543 (816)
T ss_dssp TEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECS--SC-EECCCCCEEEETTCC
T ss_pred CEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEec--CC-eeEccCCeEEecCCe
Confidence 9999776665443 112 3589999999999999999999999888888888865 33 344555677889999
Q ss_pred EEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecc-cCCCceEEEEEEcCCcc-eeeeeeeeecCCCCeee
Q psy11143 156 VEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG-PQDSGLYRCTASNLLGE-DVAEGYLTVTGAPPIFI 233 (940)
Q Consensus 156 vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~-~~DsG~YtC~a~N~~g~-~s~s~~L~V~~~~p~~~ 233 (940)
+.|.|.+.+.|.+.+.|++++..+....+.....+++|.|.++. .+|+|.|+|.|.|..|. .+....+.|...+....
T Consensus 544 v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~ 623 (816)
T 3dmk_A 544 LIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIP 623 (816)
T ss_dssp EEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBC
T ss_pred EEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCcccc
Confidence 99999999999999999999999887777777778899999998 68999999999999885 34466677764444333
Q ss_pred eCCCeeEEecCCeEEEEEEEeeeCCC-eEEEEECCeecCCCCceEEee---cCeEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGHPLP-QMTWFHDGNSLDSDDHVTYEH---DGFVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~P~p-~ItW~k~g~~l~~~~~~~~~~---~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
..+....+..|+.++|.|.+.+.|.+ .|+|+++|..+.......... ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 624 ~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 703 (816)
T 3dmk_A 624 FAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQ 703 (816)
T ss_dssp CCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred ccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccE
Confidence 44455678899999999999876655 999999999987555444332 23469999999999999999999999998
Q ss_pred eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeecc-------CCcEEEeeeceEEEecC
Q psy11143 310 ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE-------DRNHKIHRTGSLRLYNI 382 (940)
Q Consensus 310 ~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~-------~~~~~i~~~~sL~I~~v 382 (940)
..++.|.|. .+|.+...+.+..+.+|++++|.|.+.|.|.|.|+|+|++..+.. ..+.. ..+++|.|.++
T Consensus 704 ~~~~~l~V~--~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v 780 (816)
T 3dmk_A 704 QFTTPLNVY--VPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIR-VEEGTLHVDNI 780 (816)
T ss_dssp EEEEEECEE--EEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEE-EETTEEEECSC
T ss_pred EEEEEEEEE--eCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEE-ecCCEEEECcC
Confidence 888777775 588899888888999999999999999999999999998754321 22332 35679999999
Q ss_pred CCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 383 GPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 383 ~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
+.+|+|.|+|.|.|..|....++.+..+..
T Consensus 781 ~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~~ 810 (816)
T 3dmk_A 781 QKTNEGYYLCEAINGIGSGLSAVIMISVQA 810 (816)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEEEEEEEEC
T ss_pred ChhhCeEEEEEEEeCCCCCcEEEEEEEeec
Confidence 999999999999999999999988877654
No 8
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-43 Score=404.02 Aligned_cols=368 Identities=23% Similarity=0.468 Sum_probs=302.3
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeec-cCCCeEEEEECCEeecCCC--CeEEEeeceEEEEccc-----ccCCCeEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLDSDD--HVTYEHDGFVLVLNGV-----RESDAGVY 114 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g-~P~p~V~W~kdg~~I~~~~--~~~~~~~gs~L~I~~v-----~~~DsG~Y 114 (940)
.....+..+|.++.+.+|+.++|.|.+.+ .|.+.|.|+|+|..+.... +.....++. |.|.++ +.+|+|.|
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~-l~i~~~~~~~~~~~D~G~Y 97 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGS-LLIQNILHSRHHKPDEGLY 97 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSC-EEECSCCCBTTBCSSCEEE
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCc-EEEeeeeccCCCCCcceEE
Confidence 34567888999999999999999999987 6788999999999986542 333334444 477777 77899999
Q ss_pred EEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeecc---ccCceEEeeec
Q psy11143 115 NCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV---EDRNHKIHRTG 191 (940)
Q Consensus 115 tC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~---~~~~~~~~~~~ 191 (940)
+|.+.+..+.......+.+....+|.+...+....+.+|+++.|.|.+.+.|.+.++|++++..+. ...+.....++
T Consensus 98 ~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 177 (403)
T 3laf_A 98 QCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG 177 (403)
T ss_dssp EEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS
T ss_pred EEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc
Confidence 999997655444333333333346677777788899999999999999999999999999988774 33444555567
Q ss_pred eEEEeecccCCCceEEEEEEcCCcce-eeeeeeeecCCCC-----eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEE
Q psy11143 192 SLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVTGAPP-----IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH 265 (940)
Q Consensus 192 sL~I~~v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~~~p-----~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k 265 (940)
.|.|.+++.+|+|.|+|.+.|..+.. .....+.|...+. .+...+....+.+|+.++|.|.+.+.|.+.+.|++
T Consensus 178 ~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~ 257 (403)
T 3laf_A 178 ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLR 257 (403)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE
T ss_pred eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEE
Confidence 89999999999999999999987763 3456666664331 34456677888999999999999999999999999
Q ss_pred CCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEe
Q psy11143 266 DGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCK 345 (940)
Q Consensus 266 ~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~ 345 (940)
++..+...........+..|.|.++..+|+|.|+|.|.|..|....++.|.|. .+|.+...+.+..+.+|++++|.|.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~~~~~~g~~v~l~C~ 335 (403)
T 3laf_A 258 GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL--VPPWFLNHPSNLYAYESMDIEFECA 335 (403)
T ss_dssp TTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE--EEEEEEECCCCEECCTTCCEEECCE
T ss_pred CCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE--CCCcEeecCcceEEecCCeEEEEEE
Confidence 99988765444434445569999999999999999999999988777777775 5788888888888999999999999
Q ss_pred ecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 346 PDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 346 v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
+.|.|.|.|.|+++|..+....++.+...++|.|.++..+|+|.|+|.|.|..|....++.|.|++|+
T Consensus 336 ~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 336 VSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp EEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred EeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 99999999999999999988888887778899999999999999999999999999999999998763
No 9
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=4.1e-47 Score=446.41 Aligned_cols=250 Identities=35% Similarity=0.676 Sum_probs=215.4
Q ss_pred cceeeeccchhhhhheeeEEEEeecc--cccccccccccccccCcccccccCCCCchhhccccCcCccCCCCccccHHHH
Q psy11143 484 ARTVVRAADVYERTLSHIKKHIQAGV--KMNLSEDLSLGKAFFSPWRLVDEGGVDPLLRGFITSPAKRKRPTENLNKELT 561 (940)
Q Consensus 484 ~~~~~~Aa~~fg~t~~~i~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (940)
.++| .||+||||+++.-........ .....+.+.|.++||+|+.++.++|+|++++||+.|+++....+.+++++|+
T Consensus 340 ~neF-~aafRfgHsli~~~~~~~~~~~~~~~~~~~~~L~~~ff~~~~~~~~~gid~llrGl~~q~a~~~~~d~~~~~~l~ 418 (595)
T 3q9k_A 340 SNVF-TFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELR 418 (595)
T ss_dssp BTTH-HHHGGGGGGGCCSEEECBCTTSSBCSTTCEEEGGGGBTCCHHHHTTTCSHHHHHHHHHSEEECCCTTSCSCHHHH
T ss_pred HHHH-HHHHHhHHhhCcchhhccCccccccCCCCceeHHHHhcChHHhhhccchHHHHHHHhhCcccccCCCccCCHHHH
Confidence 5788 899999999954322211111 1112347899999999999999999999999999999996667899999999
Q ss_pred Hhhhccccch-hhhhhhhhhcccccCCCCcchhhhhHhCCCCcccHHHHHHHhhhHHHHHHHHHhhCCCCCccccCCChh
Q psy11143 562 DKLFTTFHAV-SLDLAAMNIQRGRDHGIPEYNAWREYCGLPRANTFEDLAREITDRRVRDKLQRLYGHPGFSYHDVLSPR 640 (940)
Q Consensus 562 ~~~~~~~~~~-~~d~~~~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (940)
++||+..+.. ++||+|+|||||||||||+||+||++|||+++++|+||+..+.++.++++|+++|++++
T Consensus 419 ~~Lf~~~~~~~g~DL~alnIqRgRdhGlp~yn~~R~~~gl~~~~sf~dl~~~~~~~~~~~~l~~lY~~~d---------- 488 (595)
T 3q9k_A 419 NKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPD---------- 488 (595)
T ss_dssp TCEECTTSCSEEECHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGG----------
T ss_pred HHhccCCCccccccHHHHHHHHHHHhCCCCHHHHHHHcCCCCCCCHHHHhhhcCcHHHHHHHHHHhCCcc----------
Confidence 9999988777 99999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHhcccccccccccCCCcccccccccccCCcccCCCCCcccccchhhhccccccccCCCcCCCcCCCCCCCCCCCC
Q psy11143 641 QIELIANLSGCMEHQRTANCSDLCFHTKYRTIDGTCNNLQHPMWGASLTGFRRLLKPIYENGFSTPVAPILSSPMAGNID 720 (940)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (940)
+
T Consensus 489 -----------------------------------------------------------------------------~-- 489 (595)
T 3q9k_A 489 -----------------------------------------------------------------------------N-- 489 (595)
T ss_dssp -----------------------------------------------------------------------------G--
T ss_pred -----------------------------------------------------------------------------c--
Confidence 4
Q ss_pred cccccccccccCCCCcCCccchhhhhhhhhcccCCCCccccceeecccCCCccccccchhhhhhhhccccCCCCccccce
Q psy11143 721 PFVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAI 800 (940)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (940)
||||||||
T Consensus 490 ------------------------------------------------------------------------iDl~vG~l 497 (595)
T 3q9k_A 490 ------------------------------------------------------------------------IDIWIGGN 497 (595)
T ss_dssp ------------------------------------------------------------------------SCHHHHHH
T ss_pred ------------------------------------------------------------------------cceeeccc
Confidence 45999999
Q ss_pred eccccCCCCCCcchhhhhhhhhhhcccCCcccccCCCCCChhHHhHhhhceeeeeeecCCCceeeEEEeecCCCCccccC
Q psy11143 801 LEDQVDGGRVGPTMRCLLIDQFKRIRDGDRFWYENPSTFKPAQLTQIKQASLARVICDSGDRLTEVRVCFSPRPTTSITP 880 (940)
Q Consensus 801 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (940)
+|+++||+++||||.|||++||.|||+||||||||++.||++||+||++++|++|||+|+ .+++|| +
T Consensus 498 ~E~~~~g~~~Gptf~~ii~~qf~~lr~gDRf~yen~~~ft~~ql~ei~~~sla~iic~n~-~i~~vq------------~ 564 (595)
T 3q9k_A 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNT-HITKVP------------L 564 (595)
T ss_dssp HSCCCTTBSSCHHHHHHHHHHHHHHHHTCTTCTTSBTTBCHHHHHHHTTCCHHHHHHHHS-SCCEEE------------S
T ss_pred ccccCCCCCcCHHHHHHHHHHHHHHHhcCCCeecCCCcCCHHHHHHHHhCCHHHHHhcCC-Cccccc------------H
Confidence 999999999999999999999999999999999999999999999999999999999995 599998 6
Q ss_pred CCceecccccccceecCCCCCCccccccccccC
Q psy11143 881 DPVITHMVMQWGQFLDHDLDHAIPATSLESWEG 913 (940)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (940)
|+|...- .-+.++..+ .+|..+++.|..
T Consensus 565 ~~F~~~~--~~n~~v~C~---~ip~~dL~~W~~ 592 (595)
T 3q9k_A 565 HAFQANN--YPHDFVDCS---TVDKLDLSPWAS 592 (595)
T ss_dssp STTSCCC--TTTTEEEGG---GSCCCCCGGGCC
T ss_pred hhccCCC--CCCCCccCC---CCCCCChHHhhC
Confidence 6544211 112445443 589999999963
No 10
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.5e-42 Score=414.23 Aligned_cols=396 Identities=19% Similarity=0.304 Sum_probs=308.4
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeecc-CCCeEEEEECCE
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGN 84 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~-P~p~V~W~kdg~ 84 (940)
+..+|+|.+++.+|+|.|+|.|.|..+..+..+.|.|..+|.+...+....+.+|+.++|.|.+.+. |.+.|.|+|++.
T Consensus 73 g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~ 152 (585)
T 2ocw_A 73 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIG 152 (585)
T ss_pred CEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCC
Confidence 3468999999999999999999998888888899999999999888999999999999999999864 457899999986
Q ss_pred eec-------------CCCCeEEEeece-----EEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCC
Q psy11143 85 SLD-------------SDDHVTYEHDGF-----VLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF 146 (940)
Q Consensus 85 ~I~-------------~~~~~~~~~~gs-----~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~ 146 (940)
.+. ...+..+..++. .|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+ |.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~-------p~ 225 (585)
T 2ocw_A 153 LYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE-------PE 225 (585)
T ss_pred CCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC-------Cc
Confidence 421 023444443332 68999999999999999999999987778888886532 33
Q ss_pred ceeecCCCcEEEEEEeCCCCC---CeEEEe-eCCee---ccc---------cCceEEee---ec--eEEEeecccCCCce
Q psy11143 147 DMRAPAGSSVEIPCKPDGEPL---PRISWS-KDEAE---FVE---------DRNHKIHR---TG--SLRLYNIGPQDSGL 205 (940)
Q Consensus 147 ~~~v~~Ge~vtL~C~v~g~P~---p~ItW~-k~g~~---i~~---------~~~~~~~~---~~--sL~I~~v~~~DsG~ 205 (940)
...+.+|+.+.|.|.+. .+. +.+.|+ +++.. +.. ..++.+.. ++ .|.|.+++.+|+|.
T Consensus 226 ~~~~~~G~~v~l~C~~~-~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~ 304 (585)
T 2ocw_A 226 LVYEDLRGSVTFHCALG-PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGR 304 (585)
T ss_pred eeEEcCCCcEEEEEEcC-CCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEE
Confidence 44678999999999974 443 678887 77732 111 22333321 33 69999999999999
Q ss_pred EEEEEEcCCcce----eeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeE----EEEE--CCe--ecCC-
Q psy11143 206 YRCTASNLLGED----VAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQM----TWFH--DGN--SLDS- 272 (940)
Q Consensus 206 YtC~a~N~~g~~----s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~I----tW~k--~g~--~l~~- 272 (940)
|+|.|.|..+.. ...+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.|.+ +|++ +|. .+..
T Consensus 305 Y~C~a~n~g~~~~~~~~~~~~l~V~-~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~ 383 (585)
T 2ocw_A 305 YLCGAHSDGQLQEGSPIQAWQLFVN-EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDS 383 (585)
T ss_pred EEEEEEcCCCccccCceeeEEEEEe-cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeee
Confidence 999999953333 167778887 5666667778888999999999999999999977 7999 886 4422
Q ss_pred --------CCceEEee---cC-eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeE
Q psy11143 273 --------DDHVTYEH---DG-FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSV 340 (940)
Q Consensus 273 --------~~~~~~~~---~g-~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~v 340 (940)
..++.+.. ++ .+|.|.++..+|+|.|+|.| |..|.....+.|.|.. .+|.+. .+....+.+|+++
T Consensus 384 ~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~-~~p~~~-~~~~~~v~~G~~v 460 (585)
T 2ocw_A 384 EGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIE-GEPNLK-VPGNVTAVLGETL 460 (585)
T ss_pred cceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEec-Cccccc-cCCceeEecCCcE
Confidence 23444432 22 24999999999999999999 9989888888888764 344444 3677889999999
Q ss_pred EEEEeec----CcCCCeEEEEeCCeeeccCCc-------EEEee---eceEEEecCCCCCCeEEEEEEEeCCeeEEE-EE
Q psy11143 341 EIPCKPD----GEPLPRISWSKDEAEFVEDRN-------HKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVA-EG 405 (940)
Q Consensus 341 tL~C~v~----g~P~p~i~W~k~g~~i~~~~~-------~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~ 405 (940)
+|.|.+. +.|.|.|.|+|+|..+..... ..+.. .++|.|.++..+|+|.|+|.|.|..|.... .+
T Consensus 461 ~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 540 (585)
T 2ocw_A 461 KVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAV 540 (585)
T ss_pred EEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEE
Confidence 9999997 778889999999987753321 11111 248999999999999999999999997665 48
Q ss_pred EEEEecCC
Q psy11143 406 YLTVTGEN 413 (940)
Q Consensus 406 ~L~V~~~~ 413 (940)
.|.|++++
T Consensus 541 ~l~V~~~p 548 (585)
T 2ocw_A 541 YVAVEERK 548 (585)
T ss_pred EEEEEeee
Confidence 99999876
No 11
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=9.8e-47 Score=434.39 Aligned_cols=249 Identities=38% Similarity=0.728 Sum_probs=214.4
Q ss_pred cceeeeccchhhhhheeeEEEEeecc--cccccccccccccccCcccccccCCCCchhhccccCcCccCCCCccccHHHH
Q psy11143 484 ARTVVRAADVYERTLSHIKKHIQAGV--KMNLSEDLSLGKAFFSPWRLVDEGGVDPLLRGFITSPAKRKRPTENLNKELT 561 (940)
Q Consensus 484 ~~~~~~Aa~~fg~t~~~i~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (940)
.++| .||+||||+++.-........ .....+.+.|.++||+|+.++.+++++++++||+.|+++....+.+++++|+
T Consensus 213 snEF-~aafRfgHsli~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~g~d~~lrgl~~q~a~~~~~d~~l~~~l~ 291 (466)
T 1d2v_C 213 ANVF-TNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIR 291 (466)
T ss_dssp BHHH-HHHGGGGGGGCCSEEECBCTTSSBCSSCSEEEGGGTTTCHHHHHHTTCHHHHHHHHHHSEEECCBTTBCSCHHHH
T ss_pred hHHH-HHHHhcccccCchhhccccccccccCCCCceeHHHHhcChHHHhhccCchHHHHHHhhCccccccCchhhhHHHH
Confidence 5689 899999999964322211111 1112246889999999999999999999999999999986556889999999
Q ss_pred HhhhccccchhhhhhhhhhcccccCCCCcchhhhhHhCCCCcccHHHHHHHhhhHHHHHHHHHhhCCCCCccccCCChhH
Q psy11143 562 DKLFTTFHAVSLDLAAMNIQRGRDHGIPEYNAWREYCGLPRANTFEDLAREITDRRVRDKLQRLYGHPGFSYHDVLSPRQ 641 (940)
Q Consensus 562 ~~~~~~~~~~~~d~~~~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (940)
++||+..+..++||+|+|||||||||||+||+||++|||+++++|+||+++|.|++++++|+++|++|+
T Consensus 292 ~~lf~~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~~~~d~~~~~~L~~lY~~~d----------- 360 (466)
T 1d2v_C 292 ERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPN----------- 360 (466)
T ss_dssp TCBTGGGSSSCBCHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGG-----------
T ss_pred HHhhcccCccchhHHHHHHHHHHHcCCCCHHHHHHHcCCCCCCCHHHHhhccCCHHHHHHHHHHhCCcc-----------
Confidence 999999888899999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHhcccccccccccCCCcccccccccccCCcccCCCCCcccccchhhhccccccccCCCcCCCcCCCCCCCCCCCCc
Q psy11143 642 IELIANLSGCMEHQRTANCSDLCFHTKYRTIDGTCNNLQHPMWGASLTGFRRLLKPIYENGFSTPVAPILSSPMAGNIDP 721 (940)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (940)
+
T Consensus 361 ----------------------------------------------------------------------------~--- 361 (466)
T 1d2v_C 361 ----------------------------------------------------------------------------N--- 361 (466)
T ss_dssp ----------------------------------------------------------------------------G---
T ss_pred ----------------------------------------------------------------------------c---
Confidence 4
Q ss_pred ccccccccccCCCCcCCccchhhhhhhhhcccCCCCccccceeecccCCCccccccchhhhhhhhccccCCCCcccccee
Q psy11143 722 FVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAIL 801 (940)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (940)
||||||+|+
T Consensus 362 -----------------------------------------------------------------------vDL~vG~la 370 (466)
T 1d2v_C 362 -----------------------------------------------------------------------IDIWMGGVS 370 (466)
T ss_dssp -----------------------------------------------------------------------SCHHHHHHH
T ss_pred -----------------------------------------------------------------------cceeecccc
Confidence 459999999
Q ss_pred ccccCCCCCCcchhhhhhhhhhhcccCCcccccCCCCCChhHHhHhhhceeeeeeecCCCceeeEEEeecCCCCccccCC
Q psy11143 802 EDQVDGGRVGPTMRCLLIDQFKRIRDGDRFWYENPSTFKPAQLTQIKQASLARVICDSGDRLTEVRVCFSPRPTTSITPD 881 (940)
Q Consensus 802 e~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (940)
|+++||+++||||.|||++||.|||+||||||+|++.||+.||+||++++|++|||+|+ .+++|| +|
T Consensus 371 E~~~~G~~~Gptf~~ii~~qf~rLr~gDRf~yen~~~ft~~ql~ei~~~sl~~iic~n~-~~~~iq------------~~ 437 (466)
T 1d2v_C 371 EPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNT-GITTVS------------KN 437 (466)
T ss_dssp SCCCTTCSSCHHHHHHHHHHHHHHHHTCTTCTTSTTTSCHHHHHHHTTCCHHHHHHHHS-SCCEEE------------CS
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhcCcccccCCCcccchhhHHHHhCCHHHHHHhcC-CCcccC------------CC
Confidence 99999999999999999999999999999999999999999999999999999999999 588998 55
Q ss_pred -CceecccccccceecCCCCCCcccccccccc
Q psy11143 882 -PVITHMVMQWGQFLDHDLDHAIPATSLESWE 912 (940)
Q Consensus 882 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (940)
+|...-. .+.++..+ .+|..+++.|.
T Consensus 438 ~~F~~~~~--~n~~~~C~---~ip~~dl~~w~ 464 (466)
T 1d2v_C 438 NIFMSNSY--PRDFVNCS---TLPALNLASWR 464 (466)
T ss_dssp CTTTCCST--TTTEEEGG---GSCCCCCGGGS
T ss_pred ccccCCCC--CCCCcCcc---cCCCCCchhhc
Confidence 4432211 12444443 58999999995
No 12
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=6e-43 Score=414.41 Aligned_cols=444 Identities=14% Similarity=0.172 Sum_probs=322.5
Q ss_pred EcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccc
Q psy11143 28 GNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVR 107 (940)
Q Consensus 28 ~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~ 107 (940)
.+..|.....+.|.|..||.+...+....+.+|+.++|.|.+.+ .|+|+|++..+. .......|.|.+++
T Consensus 19 ~~~~g~~~~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~------~~~~~~~L~I~~~~ 88 (524)
T 2ec8_A 19 RVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET------NENKQNEWITEKAE 88 (524)
T ss_dssp --------------CCCCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC------EEECSSEEEESSCC
T ss_pred hhhcCCCCCeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc------ccCccceEEEcccc
Confidence 34455566677889999999998888999999999999999987 899999998762 23445668999999
Q ss_pred cCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEee-CCeeccccCceE
Q psy11143 108 ESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK-DEAEFVEDRNHK 186 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k-~g~~i~~~~~~~ 186 (940)
.+|+|.|+|.+.| |. ...+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.++|++ ++..+....++.
T Consensus 89 ~~D~G~Y~C~a~n--g~-~~~~~l~V~~--p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~ 163 (524)
T 2ec8_A 89 ATNTGKYTCTNKH--GL-SNSIYVFVRD--PAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFI 163 (524)
T ss_dssp STTCEEEEEEETT--SC-EEEEEEECCC--SSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEE
T ss_pred hhhCEEEEEeecC--Cc-ceEEEEEECC--CCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCcee
Confidence 9999999999998 43 4455566553 3434466777889999999999999987778999988 788887766676
Q ss_pred EeeeceEEEeecccCCCc-eEEEEEEcCCcce-eeeeeeeec---CCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCe-
Q psy11143 187 IHRTGSLRLYNIGPQDSG-LYRCTASNLLGED-VAEGYLTVT---GAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ- 260 (940)
Q Consensus 187 ~~~~~sL~I~~v~~~DsG-~YtC~a~N~~g~~-s~s~~L~V~---~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~- 260 (940)
....+.|.|.+++.+|+| .|+|.+.|..+.. +..+.|.|. ..+|.+...+....+.+|+.+.|.|.+.|.|.|.
T Consensus 164 ~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~ 243 (524)
T 2ec8_A 164 PDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVY 243 (524)
T ss_dssp EETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCE
T ss_pred ECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEE
Confidence 666788999999999999 9999999987765 336777776 3678888888888999999999999999999886
Q ss_pred EEEEECCeec--CCCCceEEe-----ecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCC---
Q psy11143 261 MTWFHDGNSL--DSDDHVTYE-----HDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF--- 330 (940)
Q Consensus 261 ItW~k~g~~l--~~~~~~~~~-----~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~--- 330 (940)
++|++++..+ ....+..+. .....|.|.++..+|+|.|+|.|.|..|.....+.|.|. .+|.+...+.
T Consensus 244 i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~~~ 321 (524)
T 2ec8_A 244 STWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV--DKGFINIFPMINT 321 (524)
T ss_dssp EEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEE--SSCEEEEEESSCS
T ss_pred EEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEe--ccCceEeecCCCc
Confidence 9999999883 332222221 223459999999999999999999999998887777775 5777766553
Q ss_pred ceeecCCCeEEEEEeecCcCCCe-EEEEeCCeeeccCC-cEEEe-------eeceEEEecCCCCCCeEEEEEEEeCCeeE
Q psy11143 331 DMRAPAGSSVEIPCKPDGEPLPR-ISWSKDEAEFVEDR-NHKIH-------RTGSLRLYNIGPQDSGLYRCTASNLLGED 401 (940)
Q Consensus 331 ~~~v~~G~~vtL~C~v~g~P~p~-i~W~k~g~~i~~~~-~~~i~-------~~~sL~I~~v~~~D~G~YtC~A~N~~G~~ 401 (940)
...+.+|++++|.|.+.|.|.|. |+|+|++..+.... ++... ..++|.|.++..+|+|.|+|.|.|..|..
T Consensus 322 ~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 401 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNA 401 (524)
T ss_dssp EEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceE
Confidence 57899999999999999999998 99999998886554 33322 23589999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCcc---------------
Q psy11143 402 VAEGYLTVTGENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNE--------------- 466 (940)
Q Consensus 402 ~~s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~--------------- 466 (940)
+.++.|.|..+|.+...+. ...+ ...|....++.. +++|++++....
T Consensus 402 ~~~~~l~V~~~P~i~~~~~---------~~~g-------~l~C~~~g~P~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~ 463 (524)
T 2ec8_A 402 AIAFNVYVNTKPEILTYDR---------LVNG-------MLQCVAAGFPEP--TIDWYFCPGTEQRCSASVLPVDVQTLN 463 (524)
T ss_dssp EEEEEEEECEEEEEEEEEC---------CSSS-------CEEEEEEEESCC--EEECCCC----------CCCCCCCCCC
T ss_pred EEEEEEEEecCCeEeeccc---------CcCc-------EEEEEEEeecCC--EEEEEECCCcccccccccCCCCceeee
Confidence 9999999988765432211 1112 334555444433 788999864320
Q ss_pred --cccccccee--eeec--cCCccceeeeccchhhhhheeeEEEEe
Q psy11143 467 --QQDHGSLMK--LLRF--PDESARTVVRAADVYERTLSHIKKHIQ 506 (940)
Q Consensus 467 --~~~~~~ll~--l~r~--p~~~~~~~~~Aa~~fg~t~~~i~~~v~ 506 (940)
....+.+.. .+.. ..+.|.|.|.|.+.+|.....+...|.
T Consensus 464 ~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 509 (524)
T 2ec8_A 464 SSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFK 509 (524)
T ss_dssp C-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-
T ss_pred eccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEe
Confidence 011222321 1333 357799999999999977655544443
No 13
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=8.9e-43 Score=397.10 Aligned_cols=360 Identities=25% Similarity=0.474 Sum_probs=280.6
Q ss_pred CCeEEeCCCcEEE---ecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE-eeceEEEEccc-ccCCCeEEEEEEE
Q psy11143 45 PPIFIQRPVSTTY---STGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE-HDGFVLVLNGV-RESDAGVYNCVAQ 119 (940)
Q Consensus 45 pP~~~~~p~~~~V---~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~-~~gs~L~I~~v-~~~DsG~YtC~a~ 119 (940)
+|.|..+|....+ .+|+.+.|.|.+.|+|.|+|+|+|+|..+......++. .++.+ .|.++ +.+|+|.|+|.|.
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l-~i~~~~~~~D~G~Y~C~A~ 83 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSL-LINNPNKTQDAGTYQCIAT 83 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEE-EEESCCHHHHCEEEEEEEE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEE-EEcCCCCcccCEEEEEEEE
Confidence 4678888888777 58899999999999999999999999999765444444 44555 55554 8899999999999
Q ss_pred eCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeeccccCceEE-eeeceEEEe
Q psy11143 120 NSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKI-HRTGSLRLY 196 (940)
Q Consensus 120 n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~~~~~~~~-~~~~sL~I~ 196 (940)
|..|...+ .+.+.+...+. ..........+.+|+.+.|.|.+. +.|.+.+.|++++..+....+... ...+.|.|.
T Consensus 84 N~~G~~~s~~~~l~v~~~~~-~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~ 162 (384)
T 3kld_A 84 NSFGTIVSREAKLQFAYLEN-FKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIA 162 (384)
T ss_dssp ETTEEEECCCEEEEEEEECC-CSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEES
T ss_pred cCcccEEecceEEEEecccc-cccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEe
Confidence 99887544 45555543221 112223456788999999999765 456779999999987765444333 345679999
Q ss_pred ecccCCCceEEEEEEcCCcceee---eeeeeec------CCCCee-eeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC
Q psy11143 197 NIGPQDSGLYRCTASNLLGEDVA---EGYLTVT------GAPPIF-IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD 266 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g~~s~---s~~L~V~------~~~p~~-~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~ 266 (940)
+++.+|+|.|+|.|.|..+.... ...+.+. ..+|.+ ...+....+.+|+.+.|.|.+.|.|.|.+.|+++
T Consensus 163 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~ 242 (384)
T 3kld_A 163 KVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRA 242 (384)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEET
T ss_pred ecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeC
Confidence 99999999999999998765432 1122221 012222 3346677889999999999999999999999995
Q ss_pred -CeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEe
Q psy11143 267 -GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCK 345 (940)
Q Consensus 267 -g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~ 345 (940)
+..+... ......+.+|.|.++..+|+|.|+|.|.|..|.......|.|. .+|.+...+.+..+..|+++.|.|.
T Consensus 243 ~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~--~~P~~~~~~~~~~v~~g~~v~l~C~ 318 (384)
T 3kld_A 243 DGKPIARK--ARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY--AQPNWVQIINDIHVAMEESVFWECK 318 (384)
T ss_dssp TCCCCCTT--CEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE--EEEEEEECCCCEEECTTCCEEEECE
T ss_pred CCcccccc--ceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEe--cCCccccCCCceEecCCCCEEEEeE
Confidence 4455432 2233344469999999999999999999999998888887776 4788888888889999999999999
Q ss_pred ecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 346 PDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 346 v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
+.|.|.|.|+|+|+|..+....++.+ .+++|.|.++..+|+|.|+|.|.|..|...+++.|.|..
T Consensus 319 ~~g~P~p~i~W~k~g~~l~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 319 ANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EEEESCCEEEEEETTEECCCBTTEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCccCCCeEEEEECCEECCCCccEEE-eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 99999999999999999887777665 467999999999999999999999999999999999864
No 14
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=412.23 Aligned_cols=383 Identities=17% Similarity=0.237 Sum_probs=268.4
Q ss_pred CcccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCC-CcEEEecCCeEEEEEEeeccCCCeEEEEECC
Q psy11143 5 RSSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRP-VSTTYSTGSTSRITCLVEGHPLPQMTWFHDG 83 (940)
Q Consensus 5 ~s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p-~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg 83 (940)
+...+|.|.+++.+|+|.|+|.|.|..+.....+.|.|.. .+...+ .......|+.+.|.|.+.|+|.|.|+|++++
T Consensus 100 r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~--~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~ 177 (527)
T 3qs9_E 100 RGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN--TLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCD 177 (527)
T ss_dssp -CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-
T ss_pred ceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECC--ceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECC
Confidence 3456799999999999999999999998887777777752 222222 2334467888899999999999999999988
Q ss_pred EeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEE-EEEEEecccCCeeEecCCceeecCCCcEEEEEEe
Q psy11143 84 NSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESV-AMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP 162 (940)
Q Consensus 84 ~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~-~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v 162 (940)
..+..... ............+..+|+|.|+|.|.|..|..... +.|.|. ..|.+ .+....+.+|+++.|.|.+
T Consensus 178 ~~~~~~~~--~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~--~~p~~--~p~~~~v~~G~~v~L~C~~ 251 (527)
T 3qs9_E 178 SQGESCKE--ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN--QTPQT--TLPQLFLKVGEPLWIRCKA 251 (527)
T ss_dssp --------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESS--SCCCC--SCCEEEECTTSCEEEEEEE
T ss_pred CCCccccc--cCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEe--ccCcc--CCCceEEeCCCeEEEEEEE
Confidence 76542110 11111112233456899999999999999987663 445443 34443 5667889999999999999
Q ss_pred C-CCCCCeEEEeeCCeeccccCceE---------EeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCee
Q psy11143 163 D-GEPLPRISWSKDEAEFVEDRNHK---------IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIF 232 (940)
Q Consensus 163 ~-g~P~p~ItW~k~g~~i~~~~~~~---------~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~ 232 (940)
. +.|.+.|+|++++..+....... ....++|.|.+++.+|+|.|+|.|.|. .+..+.|.|. .+|.+
T Consensus 252 ~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~-~~p~i 327 (527)
T 3qs9_E 252 VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIV-EKGFI 327 (527)
T ss_dssp EESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC---CEE
T ss_pred ccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEE-ccCcc
Confidence 6 89999999999998775543221 223456999999999999999999987 5667778887 44444
Q ss_pred eeCC--CeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 233 IQRP--VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 233 ~~~p--~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
...+ ....+.+|+.+.|.|.+.|+|.|.|+|+|+|..+....+.. ..+.+|.|.++..+|+|.|+|.|.|..|...
T Consensus 328 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~--~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~ 405 (527)
T 3qs9_E 328 NATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL--DNGYSISKFCNHKHQPGEYIFHAENDDAQFT 405 (527)
T ss_dssp ECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC--SSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred ccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc--cCCcEEEEecCCcccCEEEEEEEEeCCCcEE
Confidence 4433 34667889999999999999999999999999987654422 2455699999999999999999999999888
Q ss_pred eEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCC-------------cEEE---eee
Q psy11143 311 SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR-------------NHKI---HRT 374 (940)
Q Consensus 311 ~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~-------------~~~i---~~~ 374 (940)
.++.|.|. .+|.+...+. | ..|.|.+.|.|.|.|+|++++....... .... ...
T Consensus 406 ~~~~L~V~--~~P~i~~~~~------~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (527)
T 3qs9_E 406 KMFTLNIR--RKPQVLAEAS------A--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSS 475 (527)
T ss_dssp EEEEEC----CCCEEEECCC------C--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEE
T ss_pred EEEEEEEe--cCCeEEEeCC------C--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEE
Confidence 77666665 6888876542 2 3579999999999999998765431100 0001 112
Q ss_pred ceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 375 GSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 375 ~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
++|.|.. .+|+|.|+|.|.|.+|..+..+.|.|.++-
T Consensus 476 s~L~i~~--~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p~ 512 (527)
T 3qs9_E 476 STLNMSE--AIKGFLVKCCAYNSLGTSCETILLNSPGPF 512 (527)
T ss_dssp EECCCCC--SSCSCEEEEEEECSSCEEEEEEEC------
T ss_pred EEEEEEE--cCCCEEEEEEEEeCCCCceeEEEEecCCCc
Confidence 2344444 469999999999999999999999887653
No 15
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3e-42 Score=391.67 Aligned_cols=365 Identities=23% Similarity=0.417 Sum_probs=287.9
Q ss_pred EEEeCCCeEEeCCCcEEEecCCeEEEEEEeec-cCCCeEEEEECCEeecCCC-CeEEEeeceEEEEcccccCCCeEEEEE
Q psy11143 40 VTVNAPPIFIQRPVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLDSDD-HVTYEHDGFVLVLNGVRESDAGVYNCV 117 (940)
Q Consensus 40 l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g-~P~p~V~W~kdg~~I~~~~-~~~~~~~gs~L~I~~v~~~DsG~YtC~ 117 (940)
+.|..+|.|...|.++.+.+|+.++|.|.+.+ .|.+.|.|+|+|..+.... ..........|.|.+++.+|+|.|+|.
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCF 80 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEE
Confidence 35778999999999999999999999999998 8889999999999887654 333333445579999999999999999
Q ss_pred EEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCC---eeccc----cCceEEe
Q psy11143 118 AQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDE---AEFVE----DRNHKIH 188 (940)
Q Consensus 118 a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g---~~i~~----~~~~~~~ 188 (940)
|.|..|...+ .+.+.|.....|.+ .+.+..+.+|+.+.|.|.+ .+.|.+.++|++++ ..... ..+....
T Consensus 81 a~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 1bih_A 81 AETPAGVASSRVISFRKTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAG 158 (395)
T ss_dssp EEETTEEEECCCEEEEEEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEEC
T ss_pred EEeCCCeEEeEEEEEEEEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEc
Confidence 9998876653 35566554444444 3446678899999999996 68899999999975 21111 3445556
Q ss_pred eeceEEEeecccCCCc---eEEEEEEcCCcceeeeeee---eecCC-------CCeeeeCCCeeEEecCCeEEEEEEEee
Q psy11143 189 RTGSLRLYNIGPQDSG---LYRCTASNLLGEDVAEGYL---TVTGA-------PPIFIQRPVSTTYSTGSTSRITCLVEG 255 (940)
Q Consensus 189 ~~~sL~I~~v~~~DsG---~YtC~a~N~~g~~s~s~~L---~V~~~-------~p~~~~~p~~~~v~~G~~v~L~C~v~G 255 (940)
.++.|.|.+++.+|+| .|+|.+.|..+........ .+... .......+....+.+|+.+.|.|.+.|
T Consensus 159 ~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g 238 (395)
T 1bih_A 159 PDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGS 238 (395)
T ss_dssp TTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEEC
T ss_pred CCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEecc
Confidence 6778999999999999 9999999988875433222 11110 001112356678899999999999999
Q ss_pred eCCCeEEEEECCeecCCCCceEEe----ecCeEEEEeeeccCCCeEEEEEEEeCCCCcee-EEEEEEeeccCCeEEEcCC
Q psy11143 256 HPLPQMTWFHDGNSLDSDDHVTYE----HDGFVLVLNGVRESDAGVYNCVAQNSEGSAES-VAMIRINGHRAPRLVVKPF 330 (940)
Q Consensus 256 ~P~p~ItW~k~g~~l~~~~~~~~~----~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~-s~~l~V~~~~~P~i~~~p~ 330 (940)
.|.+.+.|+++|..+.......+. ..+..|.|.++..+|+|.|+|.|.|..|.... ++.|.|. .+|.+...+.
T Consensus 239 ~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~--~~P~~~~~~~ 316 (395)
T 1bih_A 239 NPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV--SAPKYEQKPE 316 (395)
T ss_dssp SSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEE--EEEEEEECCC
T ss_pred CCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEE--cCCccccCCC
Confidence 999999999999988754333222 23346999999999999999999999998765 6666665 5888888887
Q ss_pred c-eeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy11143 331 D-MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 409 (940)
Q Consensus 331 ~-~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V 409 (940)
. ..+.+|++++|.|.+.|.|.|.|.|+++|..+..+ ++.+ .+++|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 317 ~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~-~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 317 KVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATV-TDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp SEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEE-ETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEE-ECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 7 78899999999999999999999999999988654 5554 3459999999999999999999999999999999987
Q ss_pred e
Q psy11143 410 T 410 (940)
Q Consensus 410 ~ 410 (940)
.
T Consensus 395 ~ 395 (395)
T 1bih_A 395 N 395 (395)
T ss_dssp C
T ss_pred C
Confidence 3
No 16
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=8.8e-42 Score=396.03 Aligned_cols=373 Identities=18% Similarity=0.241 Sum_probs=274.6
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEE-eCCCcEEEecCCeEEEEEEeeccCCC---eEEEEEC
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFI-QRPVSTTYSTGSTSRITCLVEGHPLP---QMTWFHD 82 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~-~~p~~~~V~eGesv~L~C~v~g~P~p---~V~W~kd 82 (940)
..+|.|.+++. |+| |+|.|.+..+..+..+.|.|..+|.+. ..|.+..+.+|+.++|.|.+.+.|++ .|+|+|+
T Consensus 49 ~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~ 126 (450)
T 1z7z_I 49 RKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRG 126 (450)
T ss_dssp EEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEET
T ss_pred ceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeC
Confidence 45899999988 999 999998877777778888888777665 67777889999999999999998887 9999999
Q ss_pred CEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceE--------EEEEEEEecc--cCCeeEecCCceeecC
Q psy11143 83 GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE--------SVAMIRINGH--RAPRLVVKPFDMRAPA 152 (940)
Q Consensus 83 g~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~--------~~~~L~V~~~--~~P~~~~~p~~~~v~~ 152 (940)
|..+....... ......|.|.++..+|+|.|+|.|.|..|... ....+.|... ..|.+.. ...+.+
T Consensus 127 g~~l~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~ 202 (450)
T 1z7z_I 127 EKELKREPAVG-EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEV 202 (450)
T ss_dssp TEEEEEEECCT-TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEET
T ss_pred CEEeecccccc-cccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEe
Confidence 99886332111 12234689999999999999999999876432 1234444432 1222221 267889
Q ss_pred CCcEEEEEEeCCC-C--CCeEEEeeCCeeccccCceEEeeeceEEE---eecccCCCc--eEEEEEEcCCcceeeeeeee
Q psy11143 153 GSSVEIPCKPDGE-P--LPRISWSKDEAEFVEDRNHKIHRTGSLRL---YNIGPQDSG--LYRCTASNLLGEDVAEGYLT 224 (940)
Q Consensus 153 Ge~vtL~C~v~g~-P--~p~ItW~k~g~~i~~~~~~~~~~~~sL~I---~~v~~~DsG--~YtC~a~N~~g~~s~s~~L~ 224 (940)
|+.+.|.|.+.|. | .+.+.|++++..+.. +.....+ .+.+ .+++.+|+| .|+|.+.|..|.....+.|.
T Consensus 203 G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~~~~~~-~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~ 279 (450)
T 1z7z_I 203 DTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYGND-SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVT 279 (450)
T ss_dssp TSEEEEEEEEESCTTGGGCEEEEEETTEECCC--EEEEETT-EEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eEEecCC-ceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEE
Confidence 9999999999998 7 789999999988765 2222211 2222 277899999 99999999999988888888
Q ss_pred ecCCC-CeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEE
Q psy11143 225 VTGAP-PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQ 303 (940)
Q Consensus 225 V~~~~-p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~ 303 (940)
|...+ |.+.. ....+.+|+.++|.|.+. |.|.++| +|..+.... ....|.|..+..+|+|.|+|.|.
T Consensus 280 V~~~~~p~i~~--~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~ 347 (450)
T 1z7z_I 280 IYSFPAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG------PRAQLLLKATPEDNGRSFSCSAT 347 (450)
T ss_dssp EECCCCCEEEE--SCSEEETTCEEEEEEEC--------------------C------CCCCEEEECCGGGTTCEEEEEEE
T ss_pred EecCCCCeEec--CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCC------ceEEEEEecCcccCCceEEEEEE
Confidence 88533 44433 345889999999999998 8899999 777762211 12249999999999999999999
Q ss_pred eCCC-Cc---eeEEEEEEeeccCCeEEEcC--CceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceE
Q psy11143 304 NSEG-SA---ESVAMIRINGHRAPRLVVKP--FDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSL 377 (940)
Q Consensus 304 N~~G-s~---~~s~~l~V~~~~~P~i~~~p--~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL 377 (940)
|..+ .. ..++.|.| ..+|.+...+ .+..+.+|++++|.|.+.|+|.|.|+|+|+|..+...+ .+
T Consensus 348 n~~~g~~~~~~~~~~l~V--~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g--------~~ 417 (450)
T 1z7z_I 348 LEVAGQLIHKNQTRELRV--LYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG--------ES 417 (450)
T ss_dssp EEETTEEEEEEEEEECEE--EEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTT--------SC
T ss_pred cCCCCcccccceeEEEEE--ecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCC--------Ce
Confidence 7665 32 24445555 4677766554 56788999999999999999999999999997543332 22
Q ss_pred EEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 378 RLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 378 ~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
. .++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 418 ~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 418 V--TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp E--ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred E--eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 2 57889999999999999999999999999753
No 17
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.5e-41 Score=386.71 Aligned_cols=367 Identities=23% Similarity=0.430 Sum_probs=288.5
Q ss_pred EEeCCCeEEe-CCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC--CeEEEeeceEEEEc----ccccCCCeE
Q psy11143 41 TVNAPPIFIQ-RPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTYEHDGFVLVLN----GVRESDAGV 113 (940)
Q Consensus 41 ~V~~pP~~~~-~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~--~~~~~~~gs~L~I~----~v~~~DsG~ 113 (940)
.+..+|.+.. .+....+.+|+.++|.|.+.|.|.++|.|+|+|..+.... +..+...+..|.|. +++.+|+|.
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEE
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEE
Confidence 4557888775 4677899999999999999999999999999999875432 22222333344554 788999999
Q ss_pred EEEEEEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCee-ccccCceEEeee
Q psy11143 114 YNCVAQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAE-FVEDRNHKIHRT 190 (940)
Q Consensus 114 YtC~a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~-i~~~~~~~~~~~ 190 (940)
|+|.|.|..|...+ .+.|.|...+. ..........+.+|+.++|.|.+ .+.|.+.+.|++++.. +....+.....+
T Consensus 92 Y~C~a~n~~g~~~s~~~~l~V~~~p~-~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 170 (404)
T 3p3y_A 92 YQCFARNKFGTALSNRIRLQVSKSPL-WPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHN 170 (404)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCCC-CCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTT
T ss_pred EEEEEEcCCCeEeeeeEEEEEeccCc-cccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCC
Confidence 99999999887753 56666654322 22233455788999999999999 7889999999997744 344455556667
Q ss_pred ceEEEeecccCC-CceEEEEEEcCCccee---eeeeeeecC------CCCeeeeCC---CeeEEecCCeEEEEEEEeeeC
Q psy11143 191 GSLRLYNIGPQD-SGLYRCTASNLLGEDV---AEGYLTVTG------APPIFIQRP---VSTTYSTGSTSRITCLVEGHP 257 (940)
Q Consensus 191 ~sL~I~~v~~~D-sG~YtC~a~N~~g~~s---~s~~L~V~~------~~p~~~~~p---~~~~v~~G~~v~L~C~v~G~P 257 (940)
+.|.|.+++.+| +|.|+|.+.|..+... ....+.|.. .+|.+.... ....+.+|+.+.|.|.+.|.|
T Consensus 171 ~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p 250 (404)
T 3p3y_A 171 GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVP 250 (404)
T ss_dssp SCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSS
T ss_pred CcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCC
Confidence 789999999999 5999999999877532 234455542 223333222 345688999999999999999
Q ss_pred CCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCC
Q psy11143 258 LPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAG 337 (940)
Q Consensus 258 ~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G 337 (940)
.+.++|+++|..+..... .....+..|.|.++..+|+|.|+|.|.|..|.....+.|.|. .+|.+...+.+..+.+|
T Consensus 251 ~~~v~W~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~~~v~~g 327 (404)
T 3p3y_A 251 TPDIAWYKKGGDLPSDKA-KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK--AAPYWLDEPKNLILAPG 327 (404)
T ss_dssp CCEEEEEETTBCCCTTTE-EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE--EEEEEEECCCCEEECTT
T ss_pred CCcEEEEECCEECCCCcc-cccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe--CCCeeeccCCcceeecC
Confidence 999999999998876554 334444569999999999999999999999988777777775 57888888888899999
Q ss_pred CeEEEEEeecCcCCCeEEEEeCCeeeccCC--cEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 338 SSVEIPCKPDGEPLPRISWSKDEAEFVEDR--NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 338 ~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~--~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
++++|.|.+.|.|.|.|.|+++|..+.... ......+++|.|.++..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 328 ~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 328 EDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp CCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999999886543 22233466899999999999999999999999999999998864
No 18
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.6e-41 Score=384.62 Aligned_cols=358 Identities=26% Similarity=0.421 Sum_probs=286.6
Q ss_pred CCeEEeCCCcEEE---ecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEccccc-CCCeEEEEEEEe
Q psy11143 45 PPIFIQRPVSTTY---STGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRE-SDAGVYNCVAQN 120 (940)
Q Consensus 45 pP~~~~~p~~~~V---~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~-~DsG~YtC~a~n 120 (940)
+|.|..+|....+ .+|+.++|.|.+.|.|.+.|.|+|+|..+......++...+..|.|.++.. +|+|.|+|.|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n 83 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATN 83 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEc
Confidence 6889999998887 789999999999999999999999999987654444443444679999986 999999999999
Q ss_pred CCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeecc--ccCceEEe-eeceEEE
Q psy11143 121 SEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFV--EDRNHKIH-RTGSLRL 195 (940)
Q Consensus 121 ~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~--~~~~~~~~-~~~sL~I 195 (940)
..|...+ .+.|.|...+.. ....+....+.+|+.+.|.|.+. +.|.+.+.|++++..+. ...+.... ..+.|.|
T Consensus 84 ~~g~~~s~~~~l~v~~~~~~-~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i 162 (382)
T 1cs6_A 84 ARGTVVSREASLRFGFLQEF-SAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYI 162 (382)
T ss_dssp TTEEEECCCEEEEEEEECCC-CSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEE
T ss_pred CCcEEEecceEEEeeccccc-cccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEE
Confidence 9886544 456666543221 12234567889999999999964 57888999999887643 22333222 3367999
Q ss_pred eecccCCCceEEEEEEcCCccee-----eeeeeeecC-----CCCeeee-CCCeeEEecCCeEEEEEEEeeeCCCeEEEE
Q psy11143 196 YNIGPQDSGLYRCTASNLLGEDV-----AEGYLTVTG-----APPIFIQ-RPVSTTYSTGSTSRITCLVEGHPLPQMTWF 264 (940)
Q Consensus 196 ~~v~~~DsG~YtC~a~N~~g~~s-----~s~~L~V~~-----~~p~~~~-~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~ 264 (940)
.+++.+|+|.|+|.+.|..|... ....+.+.. .+|.+.. .+....+.+|+.++|.|.+.|.|.+.+.|+
T Consensus 163 ~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~ 242 (382)
T 1cs6_A 163 AKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWR 242 (382)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEE
T ss_pred EeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEE
Confidence 99999999999999998775322 223344321 1344443 356778999999999999999999999999
Q ss_pred ECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEE
Q psy11143 265 HDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPC 344 (940)
Q Consensus 265 k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C 344 (940)
+++..+... ....+..|.|.++..+|+|.|+|.|.|..|.....+.|.|. .+|.+...+....+.+|+.++|.|
T Consensus 243 ~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~~~~~~g~~~~l~C 316 (382)
T 1cs6_A 243 KLDGSQTSK----WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH--AQPDWLDVITDTEADIGSDLRWSC 316 (382)
T ss_dssp ECCSCCSCC----CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE--EEEEEEECCCCEEEETTCCEEEEC
T ss_pred ECCcccccE----EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEe--cCCCcccCCCccEEcCCCeEEEEE
Confidence 998876541 22344569999999999999999999999987777777765 578888888888899999999999
Q ss_pred eecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 345 KPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 345 ~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
.+.|.|.|.|.|+++|..+....++.+ .+++|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 317 ~~~g~p~p~v~W~~~g~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 317 VASGKPRPAVRWLRDGQPLASQNRIEV-SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEEEESCCEEEEEETTEECCCCSSEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeeeecCCEEEEEECCEECCCCceEEE-ECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 999999999999999999887777665 45799999999999999999999999999999999986
No 19
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=390.57 Aligned_cols=383 Identities=14% Similarity=0.156 Sum_probs=245.5
Q ss_pred CCCCCeEEEEEEEcCCceE-EEE--------------EEEEEe-CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEE
Q psy11143 16 QREHGGRYSCVAGNPAGVY-RGD--------------LHVTVN-APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTW 79 (940)
Q Consensus 16 ~~sDsG~Y~C~a~n~~g~~-~~~--------------v~l~V~-~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W 79 (940)
..+|.|.|+|...+..+.. +.. +.+... ..+.++.+|..+.|.+|+++.|.|.+.+.|.+.|.|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W 82 (423)
T 3qs7_E 3 GNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLW 82 (423)
T ss_dssp -----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEE
T ss_pred ccCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEE
Confidence 4578999999998654322 111 111111 113556677789999999999999999999999999
Q ss_pred EECCEeecCCCCeEEEe-eceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEE
Q psy11143 80 FHDGNSLDSDDHVTYEH-DGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEI 158 (940)
Q Consensus 80 ~kdg~~I~~~~~~~~~~-~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL 158 (940)
++++..+.......... ....|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. +|.+. ...+..+..|+.+.|
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~--~p~~~-~~~p~~~~~~~~~~L 159 (423)
T 3qs7_E 83 VFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN--TLLYT-LRRPYFRKMENQDAL 159 (423)
T ss_dssp EETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-------C-EEEEEEEECSSSSCE
T ss_pred EECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEec--Ccccc-ccCCcEeccCCceEE
Confidence 99998876533222111 113479999999999999999999999877777777763 33322 122334567888999
Q ss_pred EEEeCCCCCCeEEEeeCCeeccccCc---eEEeeeceEEEeecccCCCceEEEEEEcCCcceee-eeeeeecCCCCeeee
Q psy11143 159 PCKPDGEPLPRISWSKDEAEFVEDRN---HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTGAPPIFIQ 234 (940)
Q Consensus 159 ~C~v~g~P~p~ItW~k~g~~i~~~~~---~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~-s~~L~V~~~~p~~~~ 234 (940)
.|.+.|.|.|.|+|++++..+..... ..+..... . +...|+|.|+|.|.|..|.... .+.|.|.. +|..
T Consensus 160 ~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~-~---l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~-~p~~-- 232 (423)
T 3qs7_E 160 VCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEK-V---LHELFGTDIRCCARNELGRECTRLFTIDLNQ-TPQT-- 232 (423)
T ss_dssp EEEEEESSCCEEEEEEC-------------CEEECCS-E---ECCCCSSCEEEEEECSSCEEEEECEEEESSS-CCCS--
T ss_pred EEEEeeecCCeEEEEECCCCCccccccccccccccce-E---EecccCeEEEEEEEcCCCCcceeeEEEEEec-CCcc--
Confidence 99999999999999998775432110 01111111 1 1578999999999999987654 35666653 2322
Q ss_pred CCCeeEEecCCeEEEEEEEee-eCCCeEEEEECCeecCCCCceE---E-----eecCeEEEEeeeccCCCeEEEEEEEeC
Q psy11143 235 RPVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLDSDDHVT---Y-----EHDGFVLVLNGVRESDAGVYNCVAQNS 305 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G-~P~p~ItW~k~g~~l~~~~~~~---~-----~~~g~sL~I~~v~~~DsG~YtC~A~N~ 305 (940)
.+....+.+|+.+.|.|.+.| .|.|.|+|+|+|..+....... . .....+|.|.++..+|+|.|+|.|.|.
T Consensus 233 ~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 455778999999999999999 6779999999999886542221 1 111235999999999999999999998
Q ss_pred CCCceeEEEEEEeeccCCeEEEcC--CceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCC
Q psy11143 306 EGSAESVAMIRINGHRAPRLVVKP--FDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 383 (940)
Q Consensus 306 ~Gs~~~s~~l~V~~~~~P~i~~~p--~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~ 383 (940)
...++.|.|. .+|.+...+ ....+.+|+++.|.|.+.|+|.|.|+|+|+|..+....... ...-.+.+....
T Consensus 313 ---~~~~~~L~V~--~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~-~~~~~~~~~~~~ 386 (423)
T 3qs7_E 313 ---PSQSALVTIV--EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL-DNGYSISKFCNH 386 (423)
T ss_dssp ---EEEEEEEEEE--SSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC-SSSSEEEEECCC
T ss_pred ---CCceEEEEEE--eCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccc-cCCcEEEEEecc
Confidence 5555666665 567666655 34677899999999999999999999999999886543110 011122235677
Q ss_pred CCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 384 PQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 384 ~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
.+|+|.|+|.|.|..|..+.++.|.|...|.
T Consensus 387 ~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~ 417 (423)
T 3qs7_E 387 KHQPGEYIFHAENDDAQFTKMFTLNIRSGTK 417 (423)
T ss_dssp TTCCSCEEEEEEETTEEEEEEEEEC------
T ss_pred cccCEEEEEEEEcCCceEEEEEEEEEecCCc
Confidence 7999999999999999999999999998765
No 20
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=2.6e-41 Score=383.32 Aligned_cols=352 Identities=24% Similarity=0.417 Sum_probs=277.8
Q ss_pred CCeEEeCCCc-EEEecCCeEEEEEEeeccCCCeEEEEE-CCEeecCCCCeEEEeeceEEEEcccccCC------CeEEEE
Q psy11143 45 PPIFIQRPVS-TTYSTGSTSRITCLVEGHPLPQMTWFH-DGNSLDSDDHVTYEHDGFVLVLNGVRESD------AGVYNC 116 (940)
Q Consensus 45 pP~~~~~p~~-~~V~eGesv~L~C~v~g~P~p~V~W~k-dg~~I~~~~~~~~~~~gs~L~I~~v~~~D------sG~YtC 116 (940)
+|.|..+|.. +.+.+|+.++|.|.+.|.|.++|+|+| +|..+......+....+..|.|.+++.+| +|.|+|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C 82 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYAC 82 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEE
Confidence 6788888776 568899999999999999999999999 78887654444334344457999999997 999999
Q ss_pred EEEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCC---CeEEEeeCCeeccc-----cCceEE
Q psy11143 117 VAQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL---PRISWSKDEAEFVE-----DRNHKI 187 (940)
Q Consensus 117 ~a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~---p~ItW~k~g~~i~~-----~~~~~~ 187 (940)
.|.|..|...+ .+.|.+.. .|.+...+....+.+|+.++|.|.+.+.+. +.+.|++++..+.. ..+...
T Consensus 83 ~a~n~~g~~~s~~~~v~v~~--~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 2v5m_A 83 LARNQFGSIISRDVHVRAVV--AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLV 160 (388)
T ss_dssp EEEETTEEEECCCEEEEEEC--CCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEE
T ss_pred EEEccCCeEEecceEEEEcc--ccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEE
Confidence 99999886433 44555543 455566667788999999999999987653 68999998876632 345555
Q ss_pred eeeceEEEeecccCCC-ceEEEEEEcCCccee-e---eeeeeecCCC----Cee-eeCCCeeEEecCCeEEEEEEEeeeC
Q psy11143 188 HRTGSLRLYNIGPQDS-GLYRCTASNLLGEDV-A---EGYLTVTGAP----PIF-IQRPVSTTYSTGSTSRITCLVEGHP 257 (940)
Q Consensus 188 ~~~~sL~I~~v~~~Ds-G~YtC~a~N~~g~~s-~---s~~L~V~~~~----p~~-~~~p~~~~v~~G~~v~L~C~v~G~P 257 (940)
..++.|.|.+++.+|+ |.|+|.+.|..+... . ...|.|.... |.+ ........+.+|+.++|.|.+.|+|
T Consensus 161 ~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p 240 (388)
T 2v5m_A 161 LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFP 240 (388)
T ss_dssp CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEES
T ss_pred ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCC
Confidence 5667899999999999 999999999764322 1 1245554221 111 1123345688999999999999999
Q ss_pred CCeEEEEECCeec------CCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCc
Q psy11143 258 LPQMTWFHDGNSL------DSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFD 331 (940)
Q Consensus 258 ~p~ItW~k~g~~l------~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~ 331 (940)
.|.|+|++++..+ ....++. ..+.+|.|.++..+|+|.|+|.|.|..|.....+.|.|. .+|.+...|..
T Consensus 241 ~p~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~ 316 (388)
T 2v5m_A 241 APSFRWYKFIEGTTRKQAVVLNDRVK--QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT--APLSAKIDPPT 316 (388)
T ss_dssp CCEEEEEEECTTSSCEEECCCSSSEE--EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE--EEEEEEEESSE
T ss_pred CCEEEEEecCCCCcccccccccCcee--cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEe--CCCccccCCCc
Confidence 9999999985433 2222322 234469999999999999999999999988777777775 57777778888
Q ss_pred eeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy11143 332 MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 409 (940)
Q Consensus 332 ~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V 409 (940)
..+.+|++++|.|.+.|.|.|.|.|+|+|..+... +++|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 317 ~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~-------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 317 QTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEecCCCCEEEEEEeccccCCeEEEEECCEECccC-------CCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 89999999999999999999999999999987543 458999999999999999999999999999999876
No 21
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=7.4e-41 Score=396.36 Aligned_cols=393 Identities=17% Similarity=0.273 Sum_probs=283.8
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCce---EEEEEEEEE----eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCC--e
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGV---YRGDLHVTV----NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLP--Q 76 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~---~~~~v~l~V----~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p--~ 76 (940)
+..+|+|.+++.+|+|.|+|.|.|..|. ....+.|.| ..+|.+...+....+.+|+.++|.|.+.|.|++ .
T Consensus 68 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 147 (523)
T 2rcj_C 68 TSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVT 147 (523)
T ss_pred CEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceE
Confidence 4568999999999999999999997753 234456777 457888888887788899999999999987654 9
Q ss_pred EEEEECCEeecCCCCeEE---Eeec-----eEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEe--cccCCeeEecCC
Q psy11143 77 MTWFHDGNSLDSDDHVTY---EHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN--GHRAPRLVVKPF 146 (940)
Q Consensus 77 V~W~kdg~~I~~~~~~~~---~~~g-----s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~--~~~~P~~~~~p~ 146 (940)
|+|+|+|..+........ ..++ ..|.|.++..+|+|.|+|.|.|..+.......+.+. ...+|.+...+.
T Consensus 148 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~ 227 (523)
T 2rcj_C 148 VAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAP 227 (523)
T ss_pred EEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCC
Confidence 999999998864322110 1122 358999999999999999999998876655443321 223455554444
Q ss_pred ceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCeeccccC--c-----eEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 147 DMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVEDR--N-----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 147 ~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~i~~~~--~-----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
...+.+|+.+.|.|.+.|. |.+ .|+|++++..+.... . ......+.|.|.++..+| |.|+|.|.|..|..
T Consensus 228 ~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 228 SSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 306 (523)
T ss_pred CcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence 4567899999999999886 877 899999987653211 1 011223479999999999 99999999999987
Q ss_pred eeeeeeeecCCCCeeeeCCCeeE-EecCCeEEEEEEEeeeCC----CeEEEEECCeecCCCCceE--EeecC-----eEE
Q psy11143 218 VAEGYLTVTGAPPIFIQRPVSTT-YSTGSTSRITCLVEGHPL----PQMTWFHDGNSLDSDDHVT--YEHDG-----FVL 285 (940)
Q Consensus 218 s~s~~L~V~~~~p~~~~~p~~~~-v~~G~~v~L~C~v~G~P~----p~ItW~k~g~~l~~~~~~~--~~~~g-----~sL 285 (940)
.....+.|...|..+...+.... +.+|+.+.|.|.+.|.|+ +.|+|+|+|..+....... ...++ ..|
T Consensus 307 ~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L 386 (523)
T 2rcj_C 307 KVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVL 386 (523)
T ss_pred ceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEE
Confidence 77777777644433344444343 788999999999999754 4999999999886543221 11122 238
Q ss_pred EEeeeccCCCeEEEEEEEeCCCCceeEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecCcCCC--eEEEEeCCe
Q psy11143 286 VLNGVRESDAGVYNCVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP--RISWSKDEA 361 (940)
Q Consensus 286 ~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p--~i~W~k~g~ 361 (940)
.|.++..+|+|.|+|.|.|..+.......+.+ ....+|.+...+.......|..++|.|.+.|.|+| .|+|+|+|.
T Consensus 387 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~ 466 (523)
T 2rcj_C 387 TVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQ 466 (523)
T ss_pred EECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChHHccCCceEEEEEEEeeECCCCEEEEEECCE
Confidence 88889999999999999999887765555543 13467777665443322334459999999998776 999999998
Q ss_pred eeccCCcEE--Eeeec------eEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 362 EFVEDRNHK--IHRTG------SLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 362 ~i~~~~~~~--i~~~~------sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
.+....... ...++ .|.|.....+|+|.|+|.|.|..-
T Consensus 467 ~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 467 PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred ECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 876432211 12233 345555555789999999999753
No 22
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=3.6e-44 Score=443.72 Aligned_cols=402 Identities=23% Similarity=0.403 Sum_probs=38.3
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCC---CcEEEecCCeEEEEEEeeccCCCeEEEEEC
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRP---VSTTYSTGSTSRITCLVEGHPLPQMTWFHD 82 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p---~~~~V~eGesv~L~C~v~g~P~p~V~W~kd 82 (940)
..++|.|.+++.+|+|.|+|.+.|..+..+..+.|.|..+|.+...+ ....+.+|+.++|.|.+.++|.+.|.|+|+
T Consensus 288 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~ 367 (772)
T 3v2a_R 288 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKN 367 (772)
T ss_dssp EEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC--------------------------------------
T ss_pred EEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEEC
Confidence 45689999999999999999999999988888999999888765543 456789999999999999999999999999
Q ss_pred CEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEec---CCceeecCCCcEEEE
Q psy11143 83 GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVK---PFDMRAPAGSSVEIP 159 (940)
Q Consensus 83 g~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~---p~~~~v~~Ge~vtL~ 159 (940)
|..+.... .+. ....|.|.+++.+|+|.|+|.|.|..|....+..+.+.+..+|.+... +....+.+|+.++|.
T Consensus 368 g~~l~~~~--~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~ 444 (772)
T 3v2a_R 368 GIPLESNH--TIK-AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLT 444 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEeCCCCc--eEc-cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEE
Confidence 99886532 222 335679999999999999999999988765544444444344544322 122247899999999
Q ss_pred EEeCCCCCCe-EEEeeCCee--------------------------------ccc-cCceEEe-----eeceEEEeeccc
Q psy11143 160 CKPDGEPLPR-ISWSKDEAE--------------------------------FVE-DRNHKIH-----RTGSLRLYNIGP 200 (940)
Q Consensus 160 C~v~g~P~p~-ItW~k~g~~--------------------------------i~~-~~~~~~~-----~~~sL~I~~v~~ 200 (940)
|.+.+.|.|. ++|++++.. +.. ..+.... ....|.|.++
T Consensus 445 C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~-- 522 (772)
T 3v2a_R 445 CTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA-- 522 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--
Confidence 9999999996 999996322 110 0011111 1135777776
Q ss_pred CCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEE--
Q psy11143 201 QDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTY-- 278 (940)
Q Consensus 201 ~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~-- 278 (940)
+|+|.|+|.|.|..|..+..+.|.|. .+|.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|+|++..+........
T Consensus 523 ~d~G~Y~C~a~N~~g~~~~~~~l~V~-~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 600 (772)
T 3v2a_R 523 NVSALYKCEAVNKVGRGERVISFHVT-RGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPT 600 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCeEEEEEEEccccccceeEEEEEE-CCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccc
Confidence 78999999999999998888888887 4555554443 4577999999999999999999999999876643221111
Q ss_pred ------------------e--ecCeEEEEeeeccCCCeEEEEEEEeCCCCce--eEEEEEEeeccCCeEEEcCCceeecC
Q psy11143 279 ------------------E--HDGFVLVLNGVRESDAGVYNCVAQNSEGSAE--SVAMIRINGHRAPRLVVKPFDMRAPA 336 (940)
Q Consensus 279 ------------------~--~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~--~s~~l~V~~~~~P~i~~~p~~~~v~~ 336 (940)
. ....+|.|.++..+|+|.|+|.|.|..+... ....+.|....+|.+...+.+..+.+
T Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~ 680 (772)
T 3v2a_R 601 PVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSI 680 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeC
Confidence 0 1122499999999999999999999765543 34556666667899988888888999
Q ss_pred CCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee-eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 337 GSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR-TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 337 G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~-~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
|++++|.|.+.|.|.|.|+|+|+|..+..+.++.+.. .++|.|.++..+|+|.|+|.|.|..|....++.|.|+++|.
T Consensus 681 g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 681 GESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 759 (772)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCC
Confidence 9999999999999999999999999887766555443 66899999999999999999999999999999999998764
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=392.03 Aligned_cols=426 Identities=13% Similarity=0.121 Sum_probs=287.2
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec-eEEEEcccccCCCeEEEEEEEeCCCceEE
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG-FVLVLNGVRESDAGVYNCVAQNSEGSAES 127 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g-s~L~I~~v~~~DsG~YtC~a~n~~g~~~~ 127 (940)
+.++..++|.+|++++|.|.+.+.|..++.|++++..+.....+.....+ ..|.|.+++.+|+|.|+|.|.|..+....
T Consensus 52 ~~~~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~ 131 (527)
T 3qs9_E 52 VYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131 (527)
T ss_dssp ----CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEE
T ss_pred eeeeeeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEE
Confidence 34555899999999999999998888899999999987654444322222 34899999999999999999998887666
Q ss_pred EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEE
Q psy11143 128 VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYR 207 (940)
Q Consensus 128 ~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~Yt 207 (940)
...|.|. +.+ +.....+.....|+.+.|.|.+.|.|.|.|+|++++..+....... ...-......+...|+|.|+
T Consensus 132 ~~~v~v~--~~~-~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~G~Y~ 207 (527)
T 3qs9_E 132 LFTVSIR--NTL-LYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEES-PAVVKKEEKVLHELFGTDIR 207 (527)
T ss_dssp EEEEEEC--------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSCEE
T ss_pred EEEEEEC--Cce-eeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccC-CcEEEEeeeeccccCCEEEE
Confidence 6555553 111 1111222334568888999999999999999999876553211000 00011222334578999999
Q ss_pred EEEEcCCcceeee-eeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEe-eeCCCeEEEEECCeecCCCCceEE-------
Q psy11143 208 CTASNLLGEDVAE-GYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDSDDHVTY------- 278 (940)
Q Consensus 208 C~a~N~~g~~s~s-~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~-G~P~p~ItW~k~g~~l~~~~~~~~------- 278 (940)
|.|.|..|..... +.|.|... |.+ .+....+.+|+.+.|.|.+. |.|.+.|+|++++..+........
T Consensus 208 C~A~N~~G~~~~~~~~l~V~~~-p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~ 284 (527)
T 3qs9_E 208 CCARNELGRECTRLFTIDLNQT-PQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNR 284 (527)
T ss_dssp EEEECSSCEEEEECEEEESSSC-CCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTT
T ss_pred EEEEeCCCcccceEEEEEEecc-Ccc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCc
Confidence 9999999986654 66777633 333 56678899999999999996 899999999999998765433221
Q ss_pred -eecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCC--ceeecCCCeEEEEEeecCcCCCeEE
Q psy11143 279 -EHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF--DMRAPAGSSVEIPCKPDGEPLPRIS 355 (940)
Q Consensus 279 -~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~--~~~v~~G~~vtL~C~v~g~P~p~i~ 355 (940)
.....+|.|.++..+|+|.|+|.|.|. ...++.|.|. .+|.+...+. ...+.+|+.+.|.|.+.|.|.|.|+
T Consensus 285 ~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~--~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~ 359 (527)
T 3qs9_E 285 TMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIV--EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCT 359 (527)
T ss_dssp EEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC----CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEE
T ss_pred ceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEE--ccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEE
Confidence 112234999999999999999999998 4455555554 5666665442 3567899999999999999999999
Q ss_pred EEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCCCCCCCCCCCCCCCCCCccccc
Q psy11143 356 WSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENSVEPAPHTSREPSASKPSVADD 435 (940)
Q Consensus 356 W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~ 435 (940)
|+|+|..+....+.. ....+|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.+...+ .+.
T Consensus 360 W~k~g~~l~~~~~~~-~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~------------~~~- 425 (527)
T 3qs9_E 360 WTFSRKSFPCEQKGL-DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEA------------SAS- 425 (527)
T ss_dssp EEETTEEEECBCCBC-SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECC------------CCE-
T ss_pred EEECCEECcCCcccc-cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeC------------CCC-
Confidence 999999887655432 245689999999999999999999999999999999998776532221 011
Q ss_pred cceeeeeecccccCcccceEEEeccCCCCccc----------------ccccc--ceeeeec--cCCccceeeeccchhh
Q psy11143 436 TIHMAVKLASREVDAAVNATINSLFGYHSNEQ----------------QDHGS--LMKLLRF--PDESARTVVRAADVYE 495 (940)
Q Consensus 436 ~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~~----------------~~~~~--ll~l~r~--p~~~~~~~~~Aa~~fg 495 (940)
...|.+..++.. ++.|++++..... ...+. ....+.+ ..+.|.|.|.|.+.+|
T Consensus 426 -----~l~C~a~g~P~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G 498 (527)
T 3qs9_E 426 -----QASCFSDGYPLP--SWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLG 498 (527)
T ss_dssp --------EEEECSSCC--EEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSC
T ss_pred -----EEEEEEEEEcCC--eEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCC
Confidence 126666666654 7788876532200 00000 0111222 2467999999999999
Q ss_pred hhheeeEEEEee
Q psy11143 496 RTLSHIKKHIQA 507 (940)
Q Consensus 496 ~t~~~i~~~v~~ 507 (940)
.....+...+..
T Consensus 499 ~~~~~~~L~V~~ 510 (527)
T 3qs9_E 499 TSCETILLNSPG 510 (527)
T ss_dssp EEEEEEEC----
T ss_pred CceeEEEEecCC
Confidence 887655544443
No 24
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1.1e-40 Score=412.41 Aligned_cols=478 Identities=19% Similarity=0.280 Sum_probs=92.5
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCCceEEEE-EEEEEeC--CCeEEeCCC-cEEEecCCeEEEEEEeec--cCCCeEEEE
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPAGVYRGD-LHVTVNA--PPIFIQRPV-STTYSTGSTSRITCLVEG--HPLPQMTWF 80 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~-v~l~V~~--pP~~~~~p~-~~~V~eGesv~L~C~v~g--~P~p~V~W~ 80 (940)
...|.|.+++.+|+|.|+|.+.+........ +.+.|.. ++.+...|. ...+.+|+.++|.|.+.+ .|.+.|.|+
T Consensus 182 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~ 261 (772)
T 3v2a_R 182 KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 261 (772)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEE
T ss_pred CCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEe
Confidence 5679999999999999999999865543322 3344433 234444444 478999999999999987 456799999
Q ss_pred ECCEeecCCCCeE----------EEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEec---CCc
Q psy11143 81 HDGNSLDSDDHVT----------YEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVK---PFD 147 (940)
Q Consensus 81 kdg~~I~~~~~~~----------~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~---p~~ 147 (940)
+++..+....... .......|.|.+++.+|+|.|+|.+.|..+.....+.|.|... |.+... +..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~--p~~~~~~~~~~~ 339 (772)
T 3v2a_R 262 YPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEK--PFVAFGSGMESL 339 (772)
T ss_dssp CC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECC--CC----------
T ss_pred cCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCC--CeeEeccCCCCc
Confidence 9998765432221 1123346899999999999999999999887777777777653 333322 245
Q ss_pred eeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCccee--eeeeeee
Q psy11143 148 MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV--AEGYLTV 225 (940)
Q Consensus 148 ~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s--~s~~L~V 225 (940)
..+.+|+.++|.|.+.+.|.+.+.|+++|..+.... .+.....|.|.+++.+|+|.|+|.|.|..|... ..+.|.|
T Consensus 340 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v 417 (772)
T 3v2a_R 340 VEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNH--TIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVV 417 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCc--eEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEE
Confidence 678899999999999999999999999998876532 223457899999999999999999999888653 4455566
Q ss_pred cCCCCeeeeC---CCeeEEecCCeEEEEEEEeeeCCCe-EEEEECCee--------------------------------
Q psy11143 226 TGAPPIFIQR---PVSTTYSTGSTSRITCLVEGHPLPQ-MTWFHDGNS-------------------------------- 269 (940)
Q Consensus 226 ~~~~p~~~~~---p~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k~g~~-------------------------------- 269 (940)
. .+|.+... .....+.+|+.++|.|.+.|.|.|. |+|++++..
T Consensus 418 ~-~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 496 (772)
T 3v2a_R 418 Y-VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNK 496 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred e-cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCc
Confidence 5 44444322 1222478899999999999999996 999997332
Q ss_pred cCCC-CceEEeec----CeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEE
Q psy11143 270 LDSD-DHVTYEHD----GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPC 344 (940)
Q Consensus 270 l~~~-~~~~~~~~----g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C 344 (940)
+... .+..+... ...|.|.++ +|+|.|+|.|.|..|..+..+.+.|. .+|.+...|. ..+.+|++++|.|
T Consensus 497 i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~--~~p~i~~~p~-~~~~~G~~v~l~C 571 (772)
T 3v2a_R 497 IEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVT--RGPEITLQPD-MQPTEQESVSLWC 571 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEE--CCceeeccCC-cccccCCceEEEE
Confidence 1110 01111111 134777766 78999999999999988887777775 4677666554 4578999999999
Q ss_pred eecCcCCCeEEEEeCCeeeccCCcEEEe-------------------e----eceEEEecCCCCCCeEEEEEEEeCCeeE
Q psy11143 345 KPDGEPLPRISWSKDEAEFVEDRNHKIH-------------------R----TGSLRLYNIGPQDSGLYRCTASNLLGED 401 (940)
Q Consensus 345 ~v~g~P~p~i~W~k~g~~i~~~~~~~i~-------------------~----~~sL~I~~v~~~D~G~YtC~A~N~~G~~ 401 (940)
.+.+.|.|.|.|+|++..+......... . ..+|.|.++..+|+|.|+|.|.|..|..
T Consensus 572 ~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 651 (772)
T 3v2a_R 572 TADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKK 651 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCe
Confidence 9999999999999998765432211110 1 1249999999999999999999976544
Q ss_pred E--EEEEEEEe--cCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCccccc-------c
Q psy11143 402 V--AEGYLTVT--GENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNEQQD-------H 470 (940)
Q Consensus 402 ~--~s~~L~V~--~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~~~~-------~ 470 (940)
. ....|.|. .+|.. ...+.......++... ..|....++.. +++|++++.+..... .
T Consensus 652 ~~s~~~~l~v~~~~~P~~------~~~~~~~~v~~g~~~~----l~C~~~g~P~p--~v~W~k~g~~l~~~~~~~~~~~~ 719 (772)
T 3v2a_R 652 RHCVVRQLTVLERVAPTI------TGNLENQTTSIGESIE----VSCTASGNPPP--QIMWFKDNETLVEDSGIVLKDGN 719 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEeecccccCCCEe------ecCCCceEEeCCCCEE----EEEEeCccCCC--eEEEEECCeECcCCCCeEEcCCC
Confidence 3 24455553 33322 2222222233444433 34544444433 678999886543110 1
Q ss_pred ccceeeeeccCCccceeeeccchhhhhheeeEEEEe
Q psy11143 471 GSLMKLLRFPDESARTVVRAADVYERTLSHIKKHIQ 506 (940)
Q Consensus 471 ~~ll~l~r~p~~~~~~~~~Aa~~fg~t~~~i~~~v~ 506 (940)
+.|...-....|.|.|.|.|.+..|.....+...|.
T Consensus 720 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 755 (772)
T 3v2a_R 720 RNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 755 (772)
T ss_dssp ------------------------------------
T ss_pred cEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEE
Confidence 112211112357799999999999988765554444
No 25
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.5e-37 Score=370.82 Aligned_cols=439 Identities=16% Similarity=0.217 Sum_probs=309.0
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccCCC---eEEEEECCEeec--------------CCCCeEEEe---ec-eEEEEcccc
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSLD--------------SDDHVTYEH---DG-FVLVLNGVR 107 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P~p---~V~W~kdg~~I~--------------~~~~~~~~~---~g-s~L~I~~v~ 107 (940)
+..|..+.+.+|++++|.|.+.+.|.+ .|.|+|++..+. ...+..+.. ++ ..|.|.+++
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 445778899999999999999887654 899999985321 012333321 22 358999999
Q ss_pred cCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCC-CCCeEEEeeCCeeccc-----
Q psy11143 108 ESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVE----- 181 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p~ItW~k~g~~i~~----- 181 (940)
.+|+|.|+|.|.|..+.....+.|.|.. +|.+...+....+.+|+.+.|.|.+.+. |.+.+.|++++.....
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~--~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~ 161 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLSFDVSLEVSQ--GPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDS 161 (585)
T ss_pred cccCEEEEEEcccCCCCceEEEEEEEec--CccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecC
Confidence 9999999999999888776676676654 5667777888899999999999999964 4568999998754210
Q ss_pred --------cCceEEeeec------eEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeE
Q psy11143 182 --------DRNHKIHRTG------SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTS 247 (940)
Q Consensus 182 --------~~~~~~~~~~------sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v 247 (940)
..+..+...+ +|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...+| ....+.+|+.+
T Consensus 162 ~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p------~~~~~~~G~~v 235 (585)
T 2ocw_A 162 SGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEP------ELVYEDLRGSV 235 (585)
T ss_pred CcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCC------ceeEEcCCCcE
Confidence 2333443333 699999999999999999999999888888888875433 34567799999
Q ss_pred EEEEEEeeeCC---CeEEEE-ECCee---c-C--------CCCceEEee---cCe-EEEEeeeccCCCeEEEEEEEeCCC
Q psy11143 248 RITCLVEGHPL---PQMTWF-HDGNS---L-D--------SDDHVTYEH---DGF-VLVLNGVRESDAGVYNCVAQNSEG 307 (940)
Q Consensus 248 ~L~C~v~G~P~---p~ItW~-k~g~~---l-~--------~~~~~~~~~---~g~-sL~I~~v~~~DsG~YtC~A~N~~G 307 (940)
.|.|.+ +.|. +.+.|+ ++|.. + . ...++.+.. ++. +|.|.++..+|+|.|+|.|.|..+
T Consensus 236 ~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~ 314 (585)
T 2ocw_A 236 TFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQ 314 (585)
T ss_pred EEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCC
Confidence 999997 4444 688897 88732 1 1 123344332 332 599999999999999999999633
Q ss_pred Cce----eEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeE----EEEe--CCe--eecc---------C
Q psy11143 308 SAE----SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRI----SWSK--DEA--EFVE---------D 366 (940)
Q Consensus 308 s~~----~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i----~W~k--~g~--~i~~---------~ 366 (940)
... ..+.|.|. .+|.+...+....+.+|++++|.|.+.+.|.|.+ .|++ +|. .+.. .
T Consensus 315 ~~~~~~~~~~~l~V~--~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~ 392 (585)
T 2ocw_A 315 LQEGSPIQAWQLFVN--EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYE 392 (585)
T ss_pred ccccCceeeEEEEEe--cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccC
Confidence 332 55555554 6788877788888999999999999999999977 7999 886 4432 3
Q ss_pred CcEEEee---ece--EEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCCCCCCCCCCCCCCCCCCccccccceeee
Q psy11143 367 RNHKIHR---TGS--LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENSVEPAPHTSREPSASKPSVADDTIHMAV 441 (940)
Q Consensus 367 ~~~~i~~---~~s--L~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~ 441 (940)
.++.+.. +++ |.|.+++.+|+|.|+|.| |..|.....+.|.|...+..... +.......++.....|.
T Consensus 393 ~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~------~~~~~v~~G~~v~L~C~ 465 (585)
T 2ocw_A 393 GRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKV------PGNVTAVLGETLKVPCH 465 (585)
T ss_pred CCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcccccc------CCceeEecCCcEEEEEE
Confidence 3554442 343 999999999999999999 99999999999999875322211 22233344555444444
Q ss_pred eecccccCcccceEEEeccCCCCccccc------------cccceeeeec----cCCccceeeeccchhhhhhee-eEEE
Q psy11143 442 KLASREVDAAVNATINSLFGYHSNEQQD------------HGSLMKLLRF----PDESARTVVRAADVYERTLSH-IKKH 504 (940)
Q Consensus 442 ~~~~~~~d~~in~t~~~lf~~~~~~~~~------------~~~ll~l~r~----p~~~~~~~~~Aa~~fg~t~~~-i~~~ 504 (940)
+.+....++ ...+.|++++....... .......|.+ ..+.|.|.|.|.+..|..... +...
T Consensus 466 ~~~~~~~~p--~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~ 543 (585)
T 2ocw_A 466 FPCKFSSYE--KYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVA 543 (585)
T ss_pred ecCCCCCCc--cEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEE
Confidence 322222222 34778999885432100 0010112222 347799999999998755432 4444
Q ss_pred Eee
Q psy11143 505 IQA 507 (940)
Q Consensus 505 v~~ 507 (940)
|..
T Consensus 544 V~~ 546 (585)
T 2ocw_A 544 VEE 546 (585)
T ss_pred EEe
Confidence 443
No 26
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=371.05 Aligned_cols=408 Identities=13% Similarity=0.184 Sum_probs=279.2
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Eeec------------CCCCeEEEe--eceEEEEcccccCCCe
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSLD------------SDDHVTYEH--DGFVLVLNGVRESDAG 112 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~I~------------~~~~~~~~~--~gs~L~I~~v~~~DsG 112 (940)
..+|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+. ...++.... ....|.|.+++.+|+|
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (523)
T 2rcj_C 4 LTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDES 83 (523)
T ss_pred cccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCE
Confidence 45577889999999999999999999999999975 2111 012333221 2246899999999999
Q ss_pred EEEEEEEeCCCce---EEEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCCCCCC--eEEEeeCCeeccccCce
Q psy11143 113 VYNCVAQNSEGSA---ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP--RISWSKDEAEFVEDRNH 185 (940)
Q Consensus 113 ~YtC~a~n~~g~~---~~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p--~ItW~k~g~~i~~~~~~ 185 (940)
.|+|.|.|..|.. ...+.|.|.. ..+|.+...+....+.+|+.+.|.|.+.|.|++ .|+|+++|..+......
T Consensus 84 ~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 163 (523)
T 2rcj_C 84 DYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVET 163 (523)
T ss_pred EEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEe
Confidence 9999999987642 2345666643 235667777777777889999999999997754 99999999877543221
Q ss_pred E---------EeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec---CCCCeeeeCCCeeEEecCCeEEEEEEE
Q psy11143 186 K---------IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT---GAPPIFIQRPVSTTYSTGSTSRITCLV 253 (940)
Q Consensus 186 ~---------~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~---~~~p~~~~~p~~~~v~~G~~v~L~C~v 253 (940)
. ......|.|.++..+|+|.|+|.|.|..+.......+.+. ..+|.+...+....+.+|+.+.|.|.+
T Consensus 164 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~ 243 (523)
T 2rcj_C 164 TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLV 243 (523)
T ss_pred ccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEE
Confidence 1 1112469999999999999999999988876555544321 244555544444566899999999999
Q ss_pred eee-CCC-eEEEEECCeecCCCCceEE-eecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeE
Q psy11143 254 EGH-PLP-QMTWFHDGNSLDSDDHVTY-EHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRL 325 (940)
Q Consensus 254 ~G~-P~p-~ItW~k~g~~l~~~~~~~~-~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i 325 (940)
.|. |.| .|+|+++|..+........ ..++ ..|.|.++..+| |.|+|.|.|..|.......+.|. .+|.+
T Consensus 244 ~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~--~~P~~ 320 (523)
T 2rcj_C 244 KDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPL--SLPSV 320 (523)
T ss_pred eceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCC--cCceE
Confidence 986 878 8999999987543211111 1122 359999999999 99999999999987766666554 34554
Q ss_pred -EEcCCcee-ecCCCeEEEEEeecCcCC----CeEEEEeCCeeeccCCcEE--------EeeeceEEEecCCCCCCeEEE
Q psy11143 326 -VVKPFDMR-APAGSSVEIPCKPDGEPL----PRISWSKDEAEFVEDRNHK--------IHRTGSLRLYNIGPQDSGLYR 391 (940)
Q Consensus 326 -~~~p~~~~-v~~G~~vtL~C~v~g~P~----p~i~W~k~g~~i~~~~~~~--------i~~~~sL~I~~v~~~D~G~Yt 391 (940)
+..|.... +.+|+.++|.|.+.|.|+ +.|+|+|+|..+....... ....+.|.|..+..+|+|.|+
T Consensus 321 ~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~ 400 (523)
T 2rcj_C 321 FLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYK 400 (523)
T ss_pred EecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEE
Confidence 44444333 788999999999998754 4999999998876443211 112346899999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEecCCCCCCCCCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCc
Q psy11143 392 CTASNLLGEDVAEGYLTVTGENSVEPAPHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSN 465 (940)
Q Consensus 392 C~A~N~~G~~~~s~~L~V~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~ 465 (940)
|.|.|..|.......|.+... ....|.....+.......+.. ....|.+...++...+++|++++.+.
T Consensus 401 C~a~n~~~~~~~~~~~~~~~~--~~~~P~v~~~~~~~~~~~~~~----~~l~C~~~g~~p~~~~v~W~k~g~~~ 468 (523)
T 2rcj_C 401 CKVSNKALPAPIEKTISKAKG--QPREPQVYTLPPSREEMTKNQ----VSLTCLVKGFYPSDIAVEWESNGQPE 468 (523)
T ss_pred EEEeCCCCCCceeEEEEcccC--CCCCCEEEEeCCChHHccCCc----eEEEEEEEeeECCCCEEEEEECCEEC
Confidence 999999887665555553110 011111111111111111222 33455555443334588999998554
No 27
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=6.1e-38 Score=363.72 Aligned_cols=418 Identities=15% Similarity=0.214 Sum_probs=289.7
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCCeE-----EEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLPQM-----TWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p~V-----~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
+...|....+.+|++++|.|.+.| |.|.+ .|+|++..+... .. ..|.|.+++. |+| |+|.|.+..
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~-~~------~~l~i~~v~~-d~g-Y~C~a~~~~ 71 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGN-NR------KVYELSNVQE-DSQ-PMCYSNCPD 71 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTT-TE------EEEEEEEECS-CBC-CEEEEEETT
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCC-Cc------eEEEEEeccc-CCe-eEEEEeCCC
Confidence 456788899999999999999999 88888 999988755421 11 2578999987 999 999998766
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCC---eEEEeeCCeeccccCceEEeeeceEEEeecc
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP---RISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 199 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p---~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~ 199 (940)
+.....+.|.|.. ++..+...+.+..+.+|+++.|.|.+.+.|.+ .|+|++++..+..........++.|.|.++.
T Consensus 72 ~~~~~~~~l~V~~-~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~ 150 (450)
T 1z7z_I 72 GQSTAKTFLTVYW-TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRR 150 (450)
T ss_dssp EEEEEECEEEEEB-CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCS
T ss_pred CcceeEEEEEEEe-CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeec
Confidence 6666677777765 22234466677889999999999999998888 8999999988865432222234589999999
Q ss_pred cCCCceEEEEEEcCCccee--------eeeeeeecCC---CCeeeeCCCeeEEecCCeEEEEEEEeee-C--CCeEEEEE
Q psy11143 200 PQDSGLYRCTASNLLGEDV--------AEGYLTVTGA---PPIFIQRPVSTTYSTGSTSRITCLVEGH-P--LPQMTWFH 265 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g~~s--------~s~~L~V~~~---~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P--~p~ItW~k 265 (940)
.+|+|.|+|.|.|..|... ....+.|... +|.+.. ...+.+|+.+.|.|.+.|. | .+.+.|++
T Consensus 151 ~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~ 227 (450)
T 1z7z_I 151 DHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227 (450)
T ss_dssp SCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGGCEEEEEE
T ss_pred cccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCceEEEEeC
Confidence 9999999999999877532 3334444422 222221 1678899999999999998 7 78999999
Q ss_pred CCeecCCCCceEEeecCeEEE-EeeeccCCCe--EEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEE
Q psy11143 266 DGNSLDSDDHVTYEHDGFVLV-LNGVRESDAG--VYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEI 342 (940)
Q Consensus 266 ~g~~l~~~~~~~~~~~g~sL~-I~~v~~~DsG--~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL 342 (940)
++..+.. ++....++..+. ..++..+|+| .|+|.|.|..|.....+.|.|....+|.+... ...+.+|+.++|
T Consensus 228 ~~~~~~~--~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~--~~~v~~G~~v~l 303 (450)
T 1z7z_I 228 GDQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILT--KPEVSEGTEVTV 303 (450)
T ss_dssp TTEECCC--EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEES--CSEEETTCEEEE
T ss_pred CCEeCCc--eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecC--CeeEeCCCcEEE
Confidence 9998876 333333332222 2267899999 99999999999988888888887667777654 348899999999
Q ss_pred EEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCe----eEEEEEEEEEecCCCCCCC
Q psy11143 343 PCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLG----EDVAEGYLTVTGENSVEPA 418 (940)
Q Consensus 343 ~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G----~~~~s~~L~V~~~~~~~~~ 418 (940)
.|.+. |.|.++| +|..+.... ...+|.|..+..+|+|.|+|.|.|..| ....++.|.|..+|.+...
T Consensus 304 ~C~~~--p~p~i~W--~g~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~ 374 (450)
T 1z7z_I 304 KCEAH--PRAKVTL--NGVPAQPLG-----PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDER 374 (450)
T ss_dssp EEEC--------------------C-----CCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCST
T ss_pred EEecC--CCCEeEE--CCEEcCCCC-----ceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeec
Confidence 99998 8899999 776662211 234799999999999999999997665 3447788888877653322
Q ss_pred CCCCCCCCCCCCccccccceeeeeecccccCcccceEEEeccCCCCccccccccceeeeeccCCccceeeeccchhhhhh
Q psy11143 419 PHTSREPSASKPSVADDTIHMAVKLASREVDAAVNATINSLFGYHSNEQQDHGSLMKLLRFPDESARTVVRAADVYERTL 498 (940)
Q Consensus 419 p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~~in~t~~~lf~~~~~~~~~~~~ll~l~r~p~~~~~~~~~Aa~~fg~t~ 498 (940)
+. |.......++. ....|....++.. +++|++++.... ..+.++. ....+.|.|.|.|.+.+|...
T Consensus 375 ~~----p~~~~~~~g~~----~~l~C~~~g~P~p--~i~W~~~g~~~~--~~g~~~~--v~~~d~G~Y~C~a~N~~G~~~ 440 (450)
T 1z7z_I 375 DC----PGNWTWPENSQ----QTPMCQAWGNPLP--ELKCLKDGTFPL--PIGESVT--VTRDLEGTYLCRARSTQGEVT 440 (450)
T ss_dssp TS----CSEEEEETTCE----ECCCCCCEEESCC--EEEEEETTTEEC--CTTSCEE--CCGGGCEEEEEEEEETTEEEE
T ss_pred cC----CCceeEcCCCe----EEEEEecccCCCC--cEEEEECCcccC--CCCCeEe--EehhhCeEEEEEEEeCCCcee
Confidence 10 11111223333 2335555544443 678999886221 2233332 224577999999999999876
Q ss_pred eeeEEEEe
Q psy11143 499 SHIKKHIQ 506 (940)
Q Consensus 499 ~~i~~~v~ 506 (940)
..+...|+
T Consensus 441 ~~~~l~V~ 448 (450)
T 1z7z_I 441 REVTVNVL 448 (450)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 65554443
No 28
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=1.3e-36 Score=350.83 Aligned_cols=359 Identities=16% Similarity=0.276 Sum_probs=257.1
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCC----CeEEEEECC--Eee------------cCCCCeEEEee--ceEEEEcccc
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPL----PQMTWFHDG--NSL------------DSDDHVTYEHD--GFVLVLNGVR 107 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~----p~V~W~kdg--~~I------------~~~~~~~~~~~--gs~L~I~~v~ 107 (940)
+...|..+.+.+|++++|.|.+.+.|. +.|.|+|++ ..+ ....++..... ...|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 455678889999999999999988776 489999963 221 01234444422 3468999999
Q ss_pred cCCCeEEEEEEEeCCCceE-EEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeeccccC
Q psy11143 108 ESDAGVYNCVAQNSEGSAE-SVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDR 183 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g~~~-~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i~~~~ 183 (940)
.+|+|.|+|.|.|..+... ..+.|.|.... +|.+...+....+.+|+.+.|.|.+.+ .|.+ .|+|+++|..+....
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 163 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 163 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCc
Confidence 9999999999999876432 24566665432 566666454444557889999999987 6777 999999998875541
Q ss_pred ----------ceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEE
Q psy11143 184 ----------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLV 253 (940)
Q Consensus 184 ----------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v 253 (940)
...+...+.|.|.++..+|+|.|+|.|.|..+.......+.+. .++.....+....+.+|+.++|.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~G~~v~L~C~~ 242 (438)
T 1qgc_4 164 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN-ECEVMLVESGGGLVKPGGSLKLSCTA 242 (438)
T ss_dssp EEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETT-C-CCEEEEECCEEECTTCCEEEEEEE
T ss_pred eeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccc-cceeEEecCCceEEecCCcEEEEEEE
Confidence 1112234579999999999999999999988775444444332 22233344566788999999999999
Q ss_pred eeeC--CCeEEEEEC--CeecC-----------------CCCceEEeec----CeEEEEeeeccCCCeEEEEEEEeCCC-
Q psy11143 254 EGHP--LPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLNGVRESDAGVYNCVAQNSEG- 307 (940)
Q Consensus 254 ~G~P--~p~ItW~k~--g~~l~-----------------~~~~~~~~~~----g~sL~I~~v~~~DsG~YtC~A~N~~G- 307 (940)
.|.| .+.+.|+|+ +..+. ...++.+..+ ..+|.|.++..+|+|.|+|.|.|..+
T Consensus 243 ~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 322 (438)
T 1qgc_4 243 SGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGD 322 (438)
T ss_dssp ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSC
T ss_pred cccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCC
Confidence 9988 679999997 54332 1244554432 23699999999999999999999544
Q ss_pred ----CceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeeccC--CcE----EEee
Q psy11143 308 ----SAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVED--RNH----KIHR 373 (940)
Q Consensus 308 ----s~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~~~--~~~----~i~~ 373 (940)
.......+.|.. ..+|.+...+....+.+|+.++|.|.+.|. |.| .|.|+++|..+... ... ....
T Consensus 323 ~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~ 402 (438)
T 1qgc_4 323 EGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 402 (438)
T ss_dssp CCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEE
T ss_pred ccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEE
Confidence 222344566653 245666555544567789999999999997 888 99999998776421 111 1112
Q ss_pred eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy11143 374 TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 408 (940)
Q Consensus 374 ~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~ 408 (940)
.+.|.|.++..+| |.|+|.|.|..|.......|.
T Consensus 403 ~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 403 SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp EEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 3468999998889 999999999999877665543
No 29
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=8.8e-36 Score=339.27 Aligned_cols=310 Identities=26% Similarity=0.465 Sum_probs=257.8
Q ss_pred ccEEEECCC-----CCCCCeEEEEEEEcCCc-e-EEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEE
Q psy11143 7 STELVISGV-----QREHGGRYSCVAGNPAG-V-YRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTW 79 (940)
Q Consensus 7 ~~tL~I~~v-----~~sDsG~Y~C~a~n~~g-~-~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W 79 (940)
+.+|.|.++ +.+|+|.|+|.+.+..+ . .+..+.+.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.|.|
T Consensus 76 ~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W 155 (403)
T 3laf_A 76 NGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHW 155 (403)
T ss_dssp TSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEE
T ss_pred CCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEE
Confidence 567888888 77899999999996543 2 2345778888899988888999999999999999999999999999
Q ss_pred EECCEeecC---CCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEE-EEEEEEecccC----CeeEecCCceeec
Q psy11143 80 FHDGNSLDS---DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAES-VAMIRINGHRA----PRLVVKPFDMRAP 151 (940)
Q Consensus 80 ~kdg~~I~~---~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~-~~~L~V~~~~~----P~~~~~p~~~~v~ 151 (940)
+|++..+.. ...... .....|.|.+++.+|+|.|+|.+.|..+.... ...+.|...+. +.+...+....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~ 234 (403)
T 3laf_A 156 QKNQQDLNPIPGDSRVVV-LPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAI 234 (403)
T ss_dssp EESSSBCCCCTTCCSEEE-CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEE
T ss_pred EECCEeccccCCceEEEE-cCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEec
Confidence 999988743 222332 23345799999999999999999998776443 56666665432 2345566778889
Q ss_pred CCCcEEEEEEeCCCCCCeEEEeeCCeecccc-CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCC
Q psy11143 152 AGSSVEIPCKPDGEPLPRISWSKDEAEFVED-RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPP 230 (940)
Q Consensus 152 ~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~-~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p 230 (940)
+|+.++|.|.+.+.|.+.+.|++++..+... .......++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|. .+|
T Consensus 235 ~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-~~p 313 (403)
T 3laf_A 235 EGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL-VPP 313 (403)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-EEE
T ss_pred CCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE-CCC
Confidence 9999999999999999999999999887643 34444556789999999999999999999999998889999988 677
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
.+...+....+.+|+.++|.|.+.|.|.|.+.|+++|..+....+..+...+ .|.|.++..+|+|.|+|.|.|..|...
T Consensus 314 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~-~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 392 (403)
T 3laf_A 314 WFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS-NLRILGVVKSDEGFYQCVAENEAGNAQ 392 (403)
T ss_dssp EEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTT-EEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred cEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCc-cEEEeccccccCEEEEEEEEcCCceEE
Confidence 7778888888999999999999999999999999999999877776665444 599999999999999999999999999
Q ss_pred eEEEEEEee
Q psy11143 311 SVAMIRING 319 (940)
Q Consensus 311 ~s~~l~V~~ 319 (940)
.++.|.|..
T Consensus 393 ~~~~l~V~~ 401 (403)
T 3laf_A 393 SSAQLIVPK 401 (403)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEEeC
Confidence 888888753
No 30
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=2.9e-36 Score=340.02 Aligned_cols=312 Identities=15% Similarity=0.212 Sum_probs=244.3
Q ss_pred cEEEecCCeEEEEEEeeccCCCeEEEEECCEeec--------------CCCCeEEEe-----eceEEEEcccccCCCeEE
Q psy11143 54 STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD--------------SDDHVTYEH-----DGFVLVLNGVRESDAGVY 114 (940)
Q Consensus 54 ~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~--------------~~~~~~~~~-----~gs~L~I~~v~~~DsG~Y 114 (940)
.+.+.+|+.++|.|.+.+.|.+.|.|+|++..+. ...++.+.. ....|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 4578899999999999999999999999986421 011222111 244589999999999999
Q ss_pred EEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEE
Q psy11143 115 NCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLR 194 (940)
Q Consensus 115 tC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~ 194 (940)
+|.+.|..+ .+.|.|.. +...+ ...+.+|++++|.|.+.+.|.+.++|++++..+ ......|.
T Consensus 83 ~C~~~n~~~----~~~l~V~~-----~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~~L~ 145 (363)
T 1wio_A 83 ICEVEDQKE----EVQLLVFG-----LTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGKTLS 145 (363)
T ss_dssp EEEETTEEE----EEEEEEEE-----EEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE-------EEESSEEE
T ss_pred EEEEEECCC----cEEEEEEe-----CCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------cccceEEE
Confidence 999987632 45555543 22333 346789999999999999999999999987654 23456899
Q ss_pred EeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEee-----eCCCeEEEEECCee
Q psy11143 195 LYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEG-----HPLPQMTWFHDGNS 269 (940)
Q Consensus 195 I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G-----~P~p~ItW~k~g~~ 269 (940)
|.+++.+|+|.|+|.|.|..+.....+.+.|...++ . +....+.+|+.+.|.|.+.+ +|.|.|+|+++|..
T Consensus 146 i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~-~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~ 221 (363)
T 1wio_A 146 VSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK-A---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERAS 221 (363)
T ss_dssp ECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC-S---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCC
T ss_pred EeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC-C---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCC
Confidence 999999999999999999877777777777773332 1 25567889999999998877 88899999999988
Q ss_pred cCC--------CCceEEee-----------c-CeEEEEeeeccCCCeEEEEEEEeC--CCCceeEEEEEEeeccCCeEEE
Q psy11143 270 LDS--------DDHVTYEH-----------D-GFVLVLNGVRESDAGVYNCVAQNS--EGSAESVAMIRINGHRAPRLVV 327 (940)
Q Consensus 270 l~~--------~~~~~~~~-----------~-g~sL~I~~v~~~DsG~YtC~A~N~--~Gs~~~s~~l~V~~~~~P~i~~ 327 (940)
+.. +.++.+.. + ..+|.|.++..+|+|.|+|.|.|. .|.....+.|.|..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-------- 293 (363)
T 1wio_A 222 SSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-------- 293 (363)
T ss_dssp CCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE--------
T ss_pred ccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE--------
Confidence 876 44444422 1 236999999999999999999999 99887777777751
Q ss_pred cCCceeecCCCeEEEEEeecCcCCCe--EEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 328 KPFDMRAPAGSSVEIPCKPDGEPLPR--ISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 328 ~p~~~~v~~G~~vtL~C~v~g~P~p~--i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
..|+.++|.|.+.|.|.|. |.|+|++..+.. .+.|.|.++..+|+|.|+|.|.|. |....+.
T Consensus 294 -------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~--------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~ 357 (363)
T 1wio_A 294 -------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV--------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLES 357 (363)
T ss_dssp -------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE--------EESSSEEEESSCCSEEEEEEECSS-SSCCEEE
T ss_pred -------ecCCCeeEEEEEccccCCCccEEEEeCCCceee--------eeeeeeeeeccccceeEEEEEecC-CeEEEec
Confidence 1288999999999999998 999999977642 346788999999999999999975 6666677
Q ss_pred EEEEe
Q psy11143 406 YLTVT 410 (940)
Q Consensus 406 ~L~V~ 410 (940)
.|.|.
T Consensus 358 ~~~V~ 362 (363)
T 1wio_A 358 NIKVL 362 (363)
T ss_dssp EEEEC
T ss_pred ceEec
Confidence 77664
No 31
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.5e-35 Score=337.39 Aligned_cols=308 Identities=25% Similarity=0.432 Sum_probs=242.2
Q ss_pred ccEEEECCC-CCCCCeEEEEEEEcCCceEE-EEEEEEEeCCCeEEe-CCCcEEEecCCeEEEEEEee-ccCCCeEEEEEC
Q psy11143 7 STELVISGV-QREHGGRYSCVAGNPAGVYR-GDLHVTVNAPPIFIQ-RPVSTTYSTGSTSRITCLVE-GHPLPQMTWFHD 82 (940)
Q Consensus 7 ~~tL~I~~v-~~sDsG~Y~C~a~n~~g~~~-~~v~l~V~~pP~~~~-~p~~~~V~eGesv~L~C~v~-g~P~p~V~W~kd 82 (940)
+++|.|.++ +.+|+|.|+|.|.|..|... ....+.|...+.+.. .+..+.+.+|+.+.|.|.+. +.|.+.+.|+++
T Consensus 61 ~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~ 140 (384)
T 3kld_A 61 DGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFN 140 (384)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEET
T ss_pred CCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEEC
Confidence 356777776 78999999999999998653 345555544443333 33557899999999999864 467789999999
Q ss_pred CEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEE---EEEEEEe-----cccCCeeE-ecCCceeecCC
Q psy11143 83 GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAES---VAMIRIN-----GHRAPRLV-VKPFDMRAPAG 153 (940)
Q Consensus 83 g~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~---~~~L~V~-----~~~~P~~~-~~p~~~~v~~G 153 (940)
+..+....+.........|.|.+++.+|+|.|+|.|.|..+.... ...+.+. ....|.+. ..+....+.+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G 220 (384)
T 3kld_A 141 EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKG 220 (384)
T ss_dssp TEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETT
T ss_pred CCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCC
Confidence 998765444444434445799999999999999999998876543 1222222 11123333 34556778999
Q ss_pred CcEEEEEEeCCCCCCeEEEeeC-CeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCee
Q psy11143 154 SSVEIPCKPDGEPLPRISWSKD-EAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIF 232 (940)
Q Consensus 154 e~vtL~C~v~g~P~p~ItW~k~-g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~ 232 (940)
+++.|.|.+.|.|.|.+.|+++ +..+... ......++.|.|.+++.+|+|.|+|.|.|..|.......|.|. .+|.+
T Consensus 221 ~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~-~~P~~ 298 (384)
T 3kld_A 221 TTVKLECFALGNPVPTILWRRADGKPIARK-ARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY-AQPNW 298 (384)
T ss_dssp SCEEEEEEEEEESCCEEEEEETTCCCCCTT-CEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-EEEEE
T ss_pred CcEEEEEEEeecCCCcEEEEeCCCcccccc-ceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEe-cCCcc
Confidence 9999999999999999999995 4444332 2222345689999999999999999999999999888889888 56777
Q ss_pred eeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeE
Q psy11143 233 IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESV 312 (940)
Q Consensus 233 ~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s 312 (940)
...+....+..|+.+.|.|.+.|.|.|.|+|+|+|..+....++.+. ++ +|.|.++..+|+|.|+|.|.|..|....+
T Consensus 299 ~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~-~~-~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~ 376 (384)
T 3kld_A 299 VQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE-QG-TLNITIVNLSDAGMYQCVAENKHGVIFSS 376 (384)
T ss_dssp EECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE-TT-EEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe-CC-EEEEeecChhhCEEEEEEEEeCCceEEec
Confidence 77788889999999999999999999999999999999877776653 33 59999999999999999999999999999
Q ss_pred EEEEEe
Q psy11143 313 AMIRIN 318 (940)
Q Consensus 313 ~~l~V~ 318 (940)
+.|.|.
T Consensus 377 a~L~V~ 382 (384)
T 3kld_A 377 AELSVI 382 (384)
T ss_dssp EEEEEC
T ss_pred eEEEEe
Confidence 998885
No 32
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=7.4e-34 Score=307.74 Aligned_cols=272 Identities=28% Similarity=0.526 Sum_probs=235.6
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe---eeceEEEeecccCCCceEEEEEEcC
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH---RTGSLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~---~~~sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
.+|.+...|.+..+.+|+.++|.|.+.+.|.+.++|++++..+....++... ....|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 4678888899999999999999999999999999999999988776655443 2457999999999999999999999
Q ss_pred CcceeeeeeeeecCCCCeeee-CCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEee--cCeEEEEeee
Q psy11143 214 LGEDVAEGYLTVTGAPPIFIQ-RPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH--DGFVLVLNGV 290 (940)
Q Consensus 214 ~g~~s~s~~L~V~~~~p~~~~-~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~--~g~sL~I~~v 290 (940)
.|..+..+.|.|. .+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+..... ....|.|.++
T Consensus 84 ~g~~~~~~~l~V~-~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 162 (284)
T 2rik_A 84 AGKDSCSAQLGVQ-EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNL 162 (284)
T ss_dssp TEEEEEEEEEEEE-CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSC
T ss_pred CceEEEEEEEEcc-CCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCC
Confidence 9998888999998 4555444 3455678899999999999999999999999999998776655432 3356999999
Q ss_pred ccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEE
Q psy11143 291 RESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHK 370 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~ 370 (940)
..+|+|.|+|.|.|..|....++.|.|. .+|.+...+....+.+|++++|.|.+.|.|.|.|.|++++..+....++.
T Consensus 163 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 240 (284)
T 2rik_A 163 SVEDSGDYTCEAHNAAGSASSSTSLKVK--EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYK 240 (284)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEE--CCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEE
T ss_pred CcccCEEEEEEEEcCCCceeEEEEEEEe--cCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEE
Confidence 9999999999999999988777777775 67888877888889999999999999999999999999999998887777
Q ss_pred Eeee---ceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 371 IHRT---GSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 371 i~~~---~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
+... .+|.|.++..+|+|.|+|.|.|..|..+.++.|.|++
T Consensus 241 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 241 IMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284 (284)
T ss_dssp EEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEcC
Confidence 6654 4799999999999999999999999999999999863
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.6e-33 Score=305.07 Aligned_cols=273 Identities=27% Similarity=0.504 Sum_probs=235.4
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE--eeceEEEEcccccCCCeEEEEEEEe
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE--HDGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~--~~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
..||.|...|....+.+|+.++|.|.+.+.|.+.|+|+|++..+....+.++. .+...|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 46899999999999999999999999999999999999999999877666555 3346689999999999999999999
Q ss_pred CCCceEEEEEEEEecccCCeeEecC-CceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEee---eceEEEe
Q psy11143 121 SEGSAESVAMIRINGHRAPRLVVKP-FDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR---TGSLRLY 196 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~~~~P~~~~~p-~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~---~~sL~I~ 196 (940)
..|.....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..... ...|.|.
T Consensus 83 ~~g~~~~~~~l~V~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (284)
T 2rik_A 83 VAGKDSCSAQLGVQE--PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMY 160 (284)
T ss_dssp TTEEEEEEEEEEEEC--CCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEEC
T ss_pred CCceEEEEEEEEccC--CCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEC
Confidence 988877777777764 45555443 34568899999999999999999999999999887666554432 3479999
Q ss_pred ecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCce
Q psy11143 197 NIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV 276 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~ 276 (940)
+++.+|+|.|+|.+.|..|.....+.|.|. .+|.+...+....+..|+.+.|.|.+.|.|.|.++|++++..+....++
T Consensus 161 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 239 (284)
T 2rik_A 161 NLSVEDSGDYTCEAHNAAGSASSSTSLKVK-EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY 239 (284)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEE-CCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTE
T ss_pred CCCcccCEEEEEEEEcCCCceeEEEEEEEe-cCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCE
Confidence 999999999999999999998888999998 6677777777888999999999999999999999999999999888777
Q ss_pred EEeecC--eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 277 TYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 277 ~~~~~g--~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.+...+ ..|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 240 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 240 KIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 766554 459999999999999999999999999888888775
No 34
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.4e-34 Score=329.16 Aligned_cols=311 Identities=24% Similarity=0.440 Sum_probs=248.2
Q ss_pred cccEEEEC----CCCCCCCeEEEEEEEcCCceEE-EEEEEEEeCCCeEEe-CCCcEEEecCCeEEEEEEe-eccCCCeEE
Q psy11143 6 SSTELVIS----GVQREHGGRYSCVAGNPAGVYR-GDLHVTVNAPPIFIQ-RPVSTTYSTGSTSRITCLV-EGHPLPQMT 78 (940)
Q Consensus 6 s~~tL~I~----~v~~sDsG~Y~C~a~n~~g~~~-~~v~l~V~~pP~~~~-~p~~~~V~eGesv~L~C~v-~g~P~p~V~ 78 (940)
.+.+|.|. +++.+|+|.|+|.|.|..|... ..+.|.|..+|.+.. .+....+.+|+.++|.|.+ .+.|.+.+.
T Consensus 71 ~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~ 150 (404)
T 3p3y_A 71 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIF 150 (404)
T ss_dssp SSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEE
T ss_pred CCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEE
Confidence 45566665 8899999999999999988764 668888888776543 3456889999999999999 788999999
Q ss_pred EEECCEee-cCCCCeEEEeeceEEEEcccccCC-CeEEEEEEEeCCCceEE---EEEEEEeccc-----CCeeEecC---
Q psy11143 79 WFHDGNSL-DSDDHVTYEHDGFVLVLNGVRESD-AGVYNCVAQNSEGSAES---VAMIRINGHR-----APRLVVKP--- 145 (940)
Q Consensus 79 W~kdg~~I-~~~~~~~~~~~gs~L~I~~v~~~D-sG~YtC~a~n~~g~~~~---~~~L~V~~~~-----~P~~~~~p--- 145 (940)
|++++... ..........++ .|.|.+++.+| +|.|+|.+.|..+.... ...+.|.... .|.+....
T Consensus 151 W~~~~~~~~~~~~~~~~~~~~-~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~ 229 (404)
T 3p3y_A 151 WMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTA 229 (404)
T ss_dssp EECTTSCBCCCCSSEEECTTS-CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSE
T ss_pred EeCCCccccCCCCcEEEcCCC-cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCC
Confidence 99987543 333344433444 46999999999 59999999998876543 2344544221 22322221
Q ss_pred CceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 146 FDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 146 ~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
....+.+|+.+.|.|.+.+.|.+.++|++++..+..........++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (404)
T 3p3y_A 230 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 309 (404)
T ss_dssp EEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 24568899999999999999999999999999887655544444678999999999999999999999999888888988
Q ss_pred cCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC-ceEEeecCeEEEEeeeccCCCeEEEEEEEe
Q psy11143 226 TGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD-HVTYEHDGFVLVLNGVRESDAGVYNCVAQN 304 (940)
Q Consensus 226 ~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~-~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N 304 (940)
. .+|.+...+....+.+|+.++|.|.+.|+|.|.++|+++|..+.... .......+.+|.|.++..+|+|.|+|.|.|
T Consensus 310 ~-~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 388 (404)
T 3p3y_A 310 K-AAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSN 388 (404)
T ss_dssp E-EEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEE
T ss_pred e-CCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEe
Confidence 8 56777788888899999999999999999999999999999987543 122223444699999999999999999999
Q ss_pred CCCCceeEEEEEEe
Q psy11143 305 SEGSAESVAMIRIN 318 (940)
Q Consensus 305 ~~Gs~~~s~~l~V~ 318 (940)
..|....++.|.|.
T Consensus 389 ~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 389 EHGYLLANAFVSVL 402 (404)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEE
Confidence 99999988888774
No 35
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=329.62 Aligned_cols=299 Identities=15% Similarity=0.219 Sum_probs=215.0
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEe
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNS 85 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~ 85 (940)
...+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+.. .....+..|+.+.|.|.+.|+|.|.|+|+|++..
T Consensus 101 ~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~ 179 (423)
T 3qs7_E 101 GVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQ 179 (423)
T ss_dssp CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC---
T ss_pred eEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccc-cCCcEeccCCceEEEEEEeeecCCeEEEEECCCC
Confidence 345799999999999999999999999988889999987775532 1233456788999999999999999999999876
Q ss_pred ecCCCC---eEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEe
Q psy11143 86 LDSDDH---VTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP 162 (940)
Q Consensus 86 I~~~~~---~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v 162 (940)
+..... ..+...... +...|+|.|+|.|.|..|.... ..+.+.+...|.+ .+.+..+.+|+.+.|.|.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~-----l~~~d~G~Y~C~A~N~~G~~~~-~~~~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~ 251 (423)
T 3qs7_E 180 GESCKEESPAVVKKEEKV-----LHELFGTDIRCCARNELGRECT-RLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKA 251 (423)
T ss_dssp ----------CEEECCSE-----ECCCCSSCEEEEEECSSCEEEE-ECEEEESSSCCCS--STTEEEEETTSCEEEEEEE
T ss_pred CccccccccccccccceE-----EecccCeEEEEEEEcCCCCcce-eeEEEEEecCCcc--CCCceEEeCCCeEEEEEEE
Confidence 532110 001111111 1678999999999999987655 2344444334433 4457789999999999999
Q ss_pred CC-CCCCeEEEeeCCeeccccCce---------EEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCee
Q psy11143 163 DG-EPLPRISWSKDEAEFVEDRNH---------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIF 232 (940)
Q Consensus 163 ~g-~P~p~ItW~k~g~~i~~~~~~---------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~ 232 (940)
.| .|.+.|+|++++..+...... .....++|.|.+++.+|+|.|+|.|.|. .+..+.|.|. .+|.+
T Consensus 252 ~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~-~~p~i 327 (423)
T 3qs7_E 252 VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIV-EKGFI 327 (423)
T ss_dssp EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEE-SSCEE
T ss_pred EcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEE-eCCcc
Confidence 98 677999999999877543211 1233457999999999999999999997 6677788887 44555
Q ss_pred eeCC--CeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 233 IQRP--VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 233 ~~~p--~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
...+ ....+.+|+++.|.|.+.|+|.|.|+|+|+|..+...... ..++..+.+.....+|+|.|+|.|.|..|...
T Consensus 328 ~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~ 405 (423)
T 3qs7_E 328 NATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG--LDNGYSISKFCNHKHQPGEYIFHAENDDAQFT 405 (423)
T ss_dssp EEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB--CSSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred eEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc--ccCCcEEEEEecccccCEEEEEEEEcCCceEE
Confidence 5444 4566788999999999999999999999999998654311 01122233356678999999999999999999
Q ss_pred eEEEEEEee
Q psy11143 311 SVAMIRING 319 (940)
Q Consensus 311 ~s~~l~V~~ 319 (940)
.++.|.|..
T Consensus 406 ~s~~L~v~~ 414 (423)
T 3qs7_E 406 KMFTLNIRS 414 (423)
T ss_dssp EEEEEC---
T ss_pred EEEEEEEec
Confidence 888888875
No 36
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=3.9e-34 Score=323.82 Aligned_cols=306 Identities=25% Similarity=0.433 Sum_probs=244.7
Q ss_pred ccEEEECCCCC-CCCeEEEEEEEcCCceEEE-EEEEEEeCCCeEEe-CCCcEEEecCCeEEEEEEe-eccCCCeEEEEEC
Q psy11143 7 STELVISGVQR-EHGGRYSCVAGNPAGVYRG-DLHVTVNAPPIFIQ-RPVSTTYSTGSTSRITCLV-EGHPLPQMTWFHD 82 (940)
Q Consensus 7 ~~tL~I~~v~~-sDsG~Y~C~a~n~~g~~~~-~v~l~V~~pP~~~~-~p~~~~V~eGesv~L~C~v-~g~P~p~V~W~kd 82 (940)
+.+|.|.++.. +|+|.|+|.|.|..|.... .+.|.|..+|.+.. .+....+.+|+.++|.|.+ .+.|.+.|.|+++
T Consensus 60 ~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~ 139 (382)
T 1cs6_A 60 AGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLN 139 (382)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEES
T ss_pred CCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEEC
Confidence 46899999997 9999999999999886532 45566655454433 3567889999999999996 4678899999999
Q ss_pred CEeec--CCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEE-----EEEEEEec----ccCCeeEe-cCCceee
Q psy11143 83 GNSLD--SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAES-----VAMIRING----HRAPRLVV-KPFDMRA 150 (940)
Q Consensus 83 g~~I~--~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~-----~~~L~V~~----~~~P~~~~-~p~~~~v 150 (940)
+..+. ...+.........|.|.+++.+|+|.|+|.+.|..|.... ...+.+.. ...|.+.. .+....+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~ 219 (382)
T 1cs6_A 140 EFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYA 219 (382)
T ss_dssp STTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEE
T ss_pred CCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEE
Confidence 87653 2233333334456799999999999999999998764333 23444432 12344444 3557789
Q ss_pred cCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCC
Q psy11143 151 PAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPP 230 (940)
Q Consensus 151 ~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p 230 (940)
.+|+.++|.|.+.+.|.+.+.|++++..+... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|. .+|
T Consensus 220 ~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-~~p 295 (382)
T 1cs6_A 220 LTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK---WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH-AQP 295 (382)
T ss_dssp ETTCCEEEECEEEEESCCEEEEEECCSCCSCC---CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-EEE
T ss_pred eCCCeEEEEEEEccCCCCEEEEEECCcccccE---EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEe-cCC
Confidence 99999999999999999999999988766431 12235679999999999999999999999998888888888 667
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
.+...+....+..|+.+.|.|.+.|.|.|.++|+++|..+....++.+. +..|.|.++..+|+|.|+|.|.|..|...
T Consensus 296 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 373 (382)
T 1cs6_A 296 DWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS--GGELRFSKLVLEDSGMYQCVAENKHGTVY 373 (382)
T ss_dssp EEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE--TTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE--CCEEEECcCCcccCEEEEEEEEeCCCeEE
Confidence 7777778888999999999999999999999999999999887776653 33599999999999999999999999999
Q ss_pred eEEEEEEe
Q psy11143 311 SVAMIRIN 318 (940)
Q Consensus 311 ~s~~l~V~ 318 (940)
.++.|.|.
T Consensus 374 ~~~~l~V~ 381 (382)
T 1cs6_A 374 ASAELTVQ 381 (382)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88888875
No 37
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=4.1e-34 Score=324.10 Aligned_cols=301 Identities=24% Similarity=0.410 Sum_probs=241.0
Q ss_pred cccEEEECCCCCCC------CeEEEEEEEcCCceE-EEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCC---C
Q psy11143 6 SSTELVISGVQREH------GGRYSCVAGNPAGVY-RGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPL---P 75 (940)
Q Consensus 6 s~~tL~I~~v~~sD------sG~Y~C~a~n~~g~~-~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~---p 75 (940)
.+++|+|.+++.+| +|.|+|.|.|..|.. +..+.|.|..+|.+...+....+.+|+.++|.|.+.+.+. +
T Consensus 57 ~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~ 136 (388)
T 2v5m_A 57 SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVE 136 (388)
T ss_dssp STTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEE
T ss_pred CCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcc
Confidence 45689999999998 999999999999864 3567788888888888888899999999999999987653 7
Q ss_pred eEEEEECCEeecC-----CCCeEEEeeceEEEEcccccCCC-eEEEEEEEeCCCceEE-E---EEEEEecccC---Cee-
Q psy11143 76 QMTWFHDGNSLDS-----DDHVTYEHDGFVLVLNGVRESDA-GVYNCVAQNSEGSAES-V---AMIRINGHRA---PRL- 141 (940)
Q Consensus 76 ~V~W~kdg~~I~~-----~~~~~~~~~gs~L~I~~v~~~Ds-G~YtC~a~n~~g~~~~-~---~~L~V~~~~~---P~~- 141 (940)
.|.|++++..+.. ..+..+..++ .|.|.+++.+|+ |.|+|.+.|..+.... . ..+.|..... |.+
T Consensus 137 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~-~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~ 215 (388)
T 2v5m_A 137 VVSWHTDEEENYFPGAEYDGKYLVLPSG-ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTP 215 (388)
T ss_dssp EEEEEETTCCEECSSSCBTTTEEECTTS-CEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECC
T ss_pred eEEEEeCCCcccccccCCCCcEEEccCC-cEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCc
Confidence 8999999987642 2233333334 469999999999 9999999998654332 1 2455543211 111
Q ss_pred EecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeecc------ccCceEEeeeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 142 VVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 142 ~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~------~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
........+.+|+.++|.|.+.|.|.+.++|++++..+. ...+. ...++.|.|.+++.+|+|.|+|.|.|..|
T Consensus 216 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 294 (388)
T 2v5m_A 216 ALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRV-KQVSGTLIIKDAVVEDSGKYLCVVNNSVG 294 (388)
T ss_dssp SSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSE-EEETTEEEESSCCGGGCEEEEEEEECSSC
T ss_pred cccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCce-ecccCEEEECcCCHHHCeEEEEEEecCCC
Confidence 112234568899999999999999999999999754322 12222 23456899999999999999999999999
Q ss_pred ceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCC
Q psy11143 216 EDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDA 295 (940)
Q Consensus 216 ~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~Ds 295 (940)
..+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.|.|+|+++|..+... +.+|.|.++..+|+
T Consensus 295 ~~~~~~~l~V~-~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~--------~~~L~i~~v~~~d~ 365 (388)
T 2v5m_A 295 GESVETVLTVT-APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS--------ESVLRIESVKKEDK 365 (388)
T ss_dssp EEEEEEEEEEE-EEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC--------SSEEEESSCCGGGC
T ss_pred ceeEEEEEEEe-CCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC--------CCEEEEecCChhhC
Confidence 98888889888 5666677778888999999999999999999999999999988643 23599999999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEE
Q psy11143 296 GVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 296 G~YtC~A~N~~Gs~~~s~~l~V 317 (940)
|.|+|.|.|..|....++.|.|
T Consensus 366 G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 366 GMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEEEcCCCcEEEEEEEEe
Confidence 9999999999999988888776
No 38
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=8.9e-34 Score=321.81 Aligned_cols=303 Identities=26% Similarity=0.424 Sum_probs=236.0
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEE-EEEEEE--eCCCeEEeCCCcEEEecCCeEEEEEEe-eccCCCeEEEEE
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRG-DLHVTV--NAPPIFIQRPVSTTYSTGSTSRITCLV-EGHPLPQMTWFH 81 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~-~v~l~V--~~pP~~~~~p~~~~V~eGesv~L~C~v-~g~P~p~V~W~k 81 (940)
..++|+|.+++.+|+|.|+|.|.|..|.... .+.+.| ...|.+ .+....+.+|+.+.|.|.+ .+.|.+.|.|++
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~ 137 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKK 137 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEE
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEe
Confidence 4568999999999999999999998886542 244443 333433 3456678899999999996 789999999999
Q ss_pred CC---EeecC----CCCeEEEeeceEEEEcccccCCCe---EEEEEEEeCCCceEEEEEEEEec-c----------cCCe
Q psy11143 82 DG---NSLDS----DDHVTYEHDGFVLVLNGVRESDAG---VYNCVAQNSEGSAESVAMIRING-H----------RAPR 140 (940)
Q Consensus 82 dg---~~I~~----~~~~~~~~~gs~L~I~~v~~~DsG---~YtC~a~n~~g~~~~~~~L~V~~-~----------~~P~ 140 (940)
++ ..... ..+.....++ .|.|.+++.+|+| .|+|.+.|..+............ . ..|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~-~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 216 (395)
T 1bih_A 138 RLSGADPNADVTDFDRRITAGPDG-NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQ 216 (395)
T ss_dssp EETTSCGGGCCCCCCTTEEECTTS-CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEE
T ss_pred cCCCcCcccccccccccEEEcCCC-cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCce
Confidence 86 22111 2334444444 4699999999999 99999999988865533222111 1 0122
Q ss_pred eEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe-----eeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 141 LVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH-----RTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 141 ~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~-----~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
+ .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.......+. ....|.|.+++.+|+|.|+|.|.|..|
T Consensus 217 ~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 294 (395)
T 1bih_A 217 Y--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVG 294 (395)
T ss_dssp E--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSS
T ss_pred e--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCC
Confidence 2 356778999999999999999999999999999888654332221 112699999999999999999999998
Q ss_pred ceee-eeeeeecCCCCeeeeCCCe-eEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccC
Q psy11143 216 EDVA-EGYLTVTGAPPIFIQRPVS-TTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRES 293 (940)
Q Consensus 216 ~~s~-s~~L~V~~~~p~~~~~p~~-~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~ 293 (940)
.... .+.|.|. .+|.+...+.. ..+.+|+.++|.|.+.|.|.|.+.|+++|..+... ++.+. ++ .|.|.++..+
T Consensus 295 ~~~~~~~~l~V~-~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~-~~-~L~i~~~~~~ 370 (395)
T 1bih_A 295 KPQKHSLKLTVV-SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVT-DS-GLVIKGVKNG 370 (395)
T ss_dssp SCEEEEEEEEEE-EEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEE-TT-EEEESSCCST
T ss_pred CceEEEEEEEEE-cCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEE-CC-EEEEeeCCcc
Confidence 8655 8888888 56777777766 78899999999999999999999999999998765 44443 23 6999999999
Q ss_pred CCeEEEEEEEeCCCCceeEEEEEE
Q psy11143 294 DAGVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 294 DsG~YtC~A~N~~Gs~~~s~~l~V 317 (940)
|+|.|+|.|.|..|....++.|.|
T Consensus 371 d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 371 DKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp TCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCEEEEEEEEccCCCceEEEEEEE
Confidence 999999999999999988887776
No 39
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=299.56 Aligned_cols=274 Identities=28% Similarity=0.511 Sum_probs=215.2
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe-e---eceEEEeeccc-CCCceEEEEEE
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH-R---TGSLRLYNIGP-QDSGLYRCTAS 211 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~-~---~~sL~I~~v~~-~DsG~YtC~a~ 211 (940)
.+|.+...+.+..+.+|++++|.|.+.|.|.+.|+|++++..+......... . ...|.|.+++. +|+|.|+|.+.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~ 84 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQ 84 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEE
Confidence 4688888899999999999999999999999999999999887544322221 1 24699999998 99999999999
Q ss_pred cCCcceeeeeeeeecCCC------CeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC---ceEEeecC
Q psy11143 212 NLLGEDVAEGYLTVTGAP------PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD---HVTYEHDG 282 (940)
Q Consensus 212 N~~g~~s~s~~L~V~~~~------p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~---~~~~~~~g 282 (940)
|..|..+..+.|.|...+ |.+...+....+..|+.+.|.|.+.|.|.+.++|++++..+.... ++....++
T Consensus 85 n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~ 164 (304)
T 2yd9_A 85 NSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG 164 (304)
T ss_dssp CSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTS
T ss_pred CCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCe
Confidence 999988888888887431 667777888889999999999999999999999999999886542 33333344
Q ss_pred eEEEEeeeccCCCeEEEEEEEeCCCCceeE-EEEEEee-ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCC
Q psy11143 283 FVLVLNGVRESDAGVYNCVAQNSEGSAESV-AMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE 360 (940)
Q Consensus 283 ~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s-~~l~V~~-~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g 360 (940)
.|.|.++..+|+|.|+|.|.|..|..... +.+.|.+ ..+|.+...+....+.+|++++|.|.+.|.|.|.|.|++++
T Consensus 165 -~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~ 243 (304)
T 2yd9_A 165 -ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGA 243 (304)
T ss_dssp -CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETT
T ss_pred -EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECC
Confidence 59999999999999999999999876543 5566654 35788888888888999999999999999999999999999
Q ss_pred eeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 361 AEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 361 ~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
..+....... .....|.|.++ +|+|.|+|.|.|..|....++.|.|++++.
T Consensus 244 ~~l~~~~~~~-~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 244 EDLTPEDDMP-VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp EECSCSSSCC-BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC------
T ss_pred EECCCccccc-CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 9887654432 12235667665 689999999999999999999999988754
No 40
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=1.5e-32 Score=318.49 Aligned_cols=348 Identities=15% Similarity=0.235 Sum_probs=238.7
Q ss_pred eCCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEeec-----------------CCCCeEEEee----ceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~I~-----------------~~~~~~~~~~----gs~L~I~ 104 (940)
.+|..+.+.+|++++|.|.+.+.+ .+.|.|||+ +..+. ...++.+..+ ...|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMS 84 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEEC
Confidence 345567899999999999998764 568999985 22210 1234444432 2468999
Q ss_pred ccccCCCeEEEEEEEeCCCce---EEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCe
Q psy11143 105 GVRESDAGVYNCVAQNSEGSA---ESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEA 177 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g~~---~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~ 177 (940)
+++.+|+|.|+|.+.|..+.. ...+.|.|... ..|.+...+....+.+|+.++|.|.+.|. |.+ .|+|++++.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 164 (444)
T 1igt_B 85 RLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 164 (444)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCC
Confidence 999999999999999976542 12356666532 23555444434446899999999999884 776 999999887
Q ss_pred eccc--cCc----eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec-----------------CCCCee-e
Q psy11143 178 EFVE--DRN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT-----------------GAPPIF-I 233 (940)
Q Consensus 178 ~i~~--~~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~-----------------~~~p~~-~ 233 (940)
.+.. ... ......+.|.|.++..+| |.|+|.|.|..+.......+.+. ..+|.+ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~ 243 (444)
T 1igt_B 165 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFI 243 (444)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEE
T ss_pred CCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEe
Confidence 5321 000 112234579999999889 99999999998876555444331 124444 3
Q ss_pred eCCCeeE-EecCCeEEEEEEEeeeC----CCeEEEEECCeecCCCCce--EEeec-----CeEEEEeeeccCCCeEEEEE
Q psy11143 234 QRPVSTT-YSTGSTSRITCLVEGHP----LPQMTWFHDGNSLDSDDHV--TYEHD-----GFVLVLNGVRESDAGVYNCV 301 (940)
Q Consensus 234 ~~p~~~~-v~~G~~v~L~C~v~G~P----~p~ItW~k~g~~l~~~~~~--~~~~~-----g~sL~I~~v~~~DsG~YtC~ 301 (940)
..+.... +.+|+.++|.|.+.|.| .+.|+|++++..+...... ....+ ...|.|.++..+|+|.|+|.
T Consensus 244 ~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~ 323 (444)
T 1igt_B 244 FPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCK 323 (444)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEE
T ss_pred cCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEE
Confidence 3333333 58899999999999984 3599999999887643221 11111 23599999999999999999
Q ss_pred EEeCCCCceeEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCeeeccCC--cEEEeee-
Q psy11143 302 AQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDR--NHKIHRT- 374 (940)
Q Consensus 302 A~N~~Gs~~~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~i~~~~--~~~i~~~- 374 (940)
|.|..+.......+.+ ....+|.+...+.......+..++|.|.+.| .|.+ .|+|+|+|..+.... ......+
T Consensus 324 a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g 403 (444)
T 1igt_B 324 VNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDG 403 (444)
T ss_dssp EECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTS
T ss_pred EEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCC
Confidence 9999987744444433 4456888776554332233445999999998 5666 999999998774211 1111222
Q ss_pred -----ceEEEecCCCCCCeEEEEEEEeCC
Q psy11143 375 -----GSLRLYNIGPQDSGLYRCTASNLL 398 (940)
Q Consensus 375 -----~sL~I~~v~~~D~G~YtC~A~N~~ 398 (940)
+.|.|.....+|.|.|+|.|.|..
T Consensus 404 ~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 404 SYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp CEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred CEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 346666666678999999999974
No 41
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-32 Score=297.19 Aligned_cols=272 Identities=29% Similarity=0.518 Sum_probs=215.0
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE--eec--eEEEEccccc-CCCeEEEEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE--HDG--FVLVLNGVRE-SDAGVYNCV 117 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~--~~g--s~L~I~~v~~-~DsG~YtC~ 117 (940)
..+|.|...|.+..+.+|+.++|.|.+.|.|.+.|.|+|+|..+... +.... .++ ..|.|.+++. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46899999999999999999999999999999999999999988643 33332 222 6789999998 999999999
Q ss_pred EEeCCCceEEEEEEEEeccc-----CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccC---ceEEee
Q psy11143 118 AQNSEGSAESVAMIRINGHR-----APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR---NHKIHR 189 (940)
Q Consensus 118 a~n~~g~~~~~~~L~V~~~~-----~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~---~~~~~~ 189 (940)
|.|..|.....+.|.|.... .|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... +.....
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECT
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCC
Confidence 99999987778888887642 1677778888889999999999999999999999999998876432 333445
Q ss_pred eceEEEeecccCCCceEEEEEEcCCcceeee-eeeeec--CCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC
Q psy11143 190 TGSLRLYNIGPQDSGLYRCTASNLLGEDVAE-GYLTVT--GAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD 266 (940)
Q Consensus 190 ~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s-~~L~V~--~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~ 266 (940)
++.|.|.+++.+|+|.|+|.|.|..|..... ..+.|. ..+|.+...+....+.+|+.+.|.|.+.|.|.|.|+|+++
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~ 242 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQG 242 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEET
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEEC
Confidence 6689999999999999999999998876532 444443 3567777777778899999999999999999999999999
Q ss_pred CeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 267 GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 267 g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
+..+....... .....|.|.++ +|+|.|+|.|.|..|....++.|.|..
T Consensus 243 ~~~l~~~~~~~--~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 291 (304)
T 2yd9_A 243 AEDLTPEDDMP--VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKS 291 (304)
T ss_dssp TEECSCSSSCC--BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC---
T ss_pred CEECCCccccc--CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 99987664432 12223666555 689999999999999998888877763
No 42
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-32 Score=294.17 Aligned_cols=273 Identities=22% Similarity=0.450 Sum_probs=221.1
Q ss_pred CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEee-CCeeccccCceEEeeec---eEEEeecccCCCceEEEEEEcC
Q psy11143 138 APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK-DEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 138 ~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k-~g~~i~~~~~~~~~~~~---sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
.|.+...+.+..+.+|+.++|.|.+.+.|. .+.|++ ++..+....+..+...+ .|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~ 82 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDA 82 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecc
Confidence 577888889999999999999999999875 899999 67777666666665544 7999999999999999999998
Q ss_pred Ccce-eeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCC--CCceEEeecCeEEEEeee
Q psy11143 214 LGED-VAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS--DDHVTYEHDGFVLVLNGV 290 (940)
Q Consensus 214 ~g~~-s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~--~~~~~~~~~g~sL~I~~v 290 (940)
.|.. +..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++....++. |.|.++
T Consensus 83 ~g~~~~~~~~l~v~-~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~-L~i~~v 160 (291)
T 2wim_A 83 KGQTQEATVVLEIY-QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN-LQILNI 160 (291)
T ss_dssp SSCEEEEEEEEEEE-CCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSC-EEETTC
T ss_pred cCceEEEEEEEEec-CCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCC-EEEEec
Confidence 8875 456677776 556666667778899999999999999999999999999988764 34445444554 999999
Q ss_pred ccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCC--ceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCc
Q psy11143 291 RESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF--DMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRN 368 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~--~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~ 368 (940)
..+|+|.|+|.|.|..+.......+.+.+..+|.+...+. ...+.+|+.++|.|.+.|.|.|.|.|+++|..+....+
T Consensus 161 ~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 240 (291)
T 2wim_A 161 NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEK 240 (291)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTT
T ss_pred chhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCcc
Confidence 9999999999999998766555555555556777665443 34678999999999999999999999999999887777
Q ss_pred EEEee-eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 369 HKIHR-TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 369 ~~i~~-~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
+.+.. .++|.|.++..+|+|.|+|.|.|..|..++++.|.|..++
T Consensus 241 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 241 YILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred EEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 66544 4589999999999999999999999999999999998764
No 43
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.4e-31 Score=290.60 Aligned_cols=272 Identities=22% Similarity=0.413 Sum_probs=220.4
Q ss_pred CCeeEecCCceeecCCCcEEEEEEeCCCC-CCeEEEee-CCeecccc-CceEEe----eeceEEEeecccCCCceEEEEE
Q psy11143 138 APRLVVKPFDMRAPAGSSVEIPCKPDGEP-LPRISWSK-DEAEFVED-RNHKIH----RTGSLRLYNIGPQDSGLYRCTA 210 (940)
Q Consensus 138 ~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P-~p~ItW~k-~g~~i~~~-~~~~~~----~~~sL~I~~v~~~DsG~YtC~a 210 (940)
++.+.+.|.+..+.+|++++|.|.+.+.| .+.++|++ +|..+... .+..+. ..+.|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 35677888889999999999999999976 68999999 77766533 333332 2457999999999999999999
Q ss_pred EcCCcc-eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCC--CceEEeecCeEEEE
Q psy11143 211 SNLLGE-DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD--DHVTYEHDGFVLVL 287 (940)
Q Consensus 211 ~N~~g~-~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~--~~~~~~~~g~sL~I 287 (940)
.|..|. .+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++....++ .|.|
T Consensus 82 ~n~~g~~~~~~~~l~v~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-~L~i 159 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIF-QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN-YLQI 159 (291)
T ss_dssp ECTTSCEEEEEEEEEEE-CCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTS-CEEE
T ss_pred EcCCCCeeEEEEEEEee-ccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCC-cEEE
Confidence 998854 4566777777 6677777888888999999999999999999999999999887543 333444444 4999
Q ss_pred eeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCC--ceeecCCCeEEEEEeecCcCCCeEEEEeCCeeecc
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF--DMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE 365 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~--~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~ 365 (940)
.++..+|+|.|+|.|.|..+.......+.+.+..+|.+...+. ...+.+|+.++|.|.+.|.|.|.|.|++++..+..
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~ 239 (291)
T 1qz1_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIEN 239 (291)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred ccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcC
Confidence 9999999999999999987555444445554456777776543 45788999999999999999999999999998875
Q ss_pred CC----cEEEee-eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 366 DR----NHKIHR-TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 366 ~~----~~~i~~-~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
.. ++.+.. .++|.|.++..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 240 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 240 EEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp C--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 53 444433 34799999999999999999999999999999999875
No 44
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=2.7e-31 Score=288.33 Aligned_cols=271 Identities=22% Similarity=0.453 Sum_probs=218.5
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccC-CCeEEEEE-CCEeecCC-CCeEEE---eeceEEEEcccccCCCeEEEEEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHP-LPQMTWFH-DGNSLDSD-DHVTYE---HDGFVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P-~p~V~W~k-dg~~I~~~-~~~~~~---~~gs~L~I~~v~~~DsG~YtC~a 118 (940)
|+.+...|....+.+|+.++|.|.+.+.| .+.|.|++ +|..+... .+..+. .....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 57788889999999999999999999876 68999999 78777643 334333 23456899999999999999999
Q ss_pred EeCCCceE-EEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccc--cCceEEeeeceEEE
Q psy11143 119 QNSEGSAE-SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE--DRNHKIHRTGSLRL 195 (940)
Q Consensus 119 ~n~~g~~~-~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~--~~~~~~~~~~sL~I 195 (940)
.|..|... ..+.|.| ..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++....++.|.|
T Consensus 82 ~n~~g~~~~~~~~l~v--~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKI--FQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (291)
T ss_dssp ECTTSCEEEEEEEEEE--ECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEE
T ss_pred EcCCCCeeEEEEEEEe--eccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEE
Confidence 99886532 3444444 4567788888888999999999999999999999999999887753 23444555678999
Q ss_pred eecccCCCceEEEEEEcCCcce--eeeeeeeecCCCCeeeeCCC--eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecC
Q psy11143 196 YNIGPQDSGLYRCTASNLLGED--VAEGYLTVTGAPPIFIQRPV--STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD 271 (940)
Q Consensus 196 ~~v~~~DsG~YtC~a~N~~g~~--s~s~~L~V~~~~p~~~~~p~--~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~ 271 (940)
.+++.+|+|.|+|.+.|..+.. .....+.|. .+|.+...+. ...+..|+.+.|.|.+.|.|.|.+.|+++|..+.
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~-~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~ 238 (291)
T 1qz1_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQVIVN-VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIE 238 (291)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE-EEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECC
T ss_pred ccCccccCeEEEEEEEecCCCceeeEEEEEEEe-cCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECc
Confidence 9999999999999999876443 344556665 4555554433 4567889999999999999999999999999987
Q ss_pred CCC----ceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 272 SDD----HVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 272 ~~~----~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
... ++.....+..|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 239 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 239 NEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp CC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 664 55666666779999999999999999999999998888888875
No 45
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=290.85 Aligned_cols=272 Identities=22% Similarity=0.457 Sum_probs=221.2
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEE-CCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEe
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH-DGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~k-dg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n 120 (940)
.+|.+...|.++.+.+|+.++|.|.+.+.|. .|.|++ +|..+....+..+..++ ..|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4788999999999999999999999999875 999999 77777766677666544 5689999999999999999999
Q ss_pred CCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccc--cCceEEeeeceEEEee
Q psy11143 121 SEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE--DRNHKIHRTGSLRLYN 197 (940)
Q Consensus 121 ~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~--~~~~~~~~~~sL~I~~ 197 (940)
..|.... ...|.|. ..|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++....++.|.|.+
T Consensus 82 ~~g~~~~~~~~l~v~--~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 159 (291)
T 2wim_A 82 AKGQTQEATVVLEIY--QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILN 159 (291)
T ss_dssp SSSCEEEEEEEEEEE--CCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETT
T ss_pred ccCceEEEEEEEEec--CCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEe
Confidence 9887643 4455554 456666667778899999999999999999999999999887754 3445555667899999
Q ss_pred cccCCCceEEEEEEcCCcce--eeeeeeeecCCCCeeeeCCC--eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCC
Q psy11143 198 IGPQDSGLYRCTASNLLGED--VAEGYLTVTGAPPIFIQRPV--STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD 273 (940)
Q Consensus 198 v~~~DsG~YtC~a~N~~g~~--s~s~~L~V~~~~p~~~~~p~--~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~ 273 (940)
++.+|+|.|+|.+.|..+.. .....+.|. .+|.+...+. ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 160 v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~-~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 238 (291)
T 2wim_A 160 INKSDEGIYRCEGRVEARGEIDFRDIIVIVN-VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN 238 (291)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-BCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT
T ss_pred cchhhCEEEEEEEEECCCCeeEEeeEEEEec-cCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC
Confidence 99999999999999987543 344556665 4455544433 346778999999999999999999999999999888
Q ss_pred CceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 274 DHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 274 ~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
.++.+...+..|.|.++..+|+|.|+|.|.|..|..+.++.+.|..
T Consensus 239 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 239 EKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp TTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred ccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 8877776677799999999999999999999999999998888864
No 46
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=100.00 E-value=1.9e-35 Score=346.56 Aligned_cols=190 Identities=19% Similarity=0.293 Sum_probs=162.0
Q ss_pred cceeeeccchhhhhheeeEEEEeecccccccccccccccccCcccccccCCCCchhhccccCcCccCCCCccccHHHHHh
Q psy11143 484 ARTVVRAADVYERTLSHIKKHIQAGVKMNLSEDLSLGKAFFSPWRLVDEGGVDPLLRGFITSPAKRKRPTENLNKELTDK 563 (940)
Q Consensus 484 ~~~~~~Aa~~fg~t~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (940)
..+|+.| +|+|+++. ..+... .+.+.|.++||+|. ++.++|++++++||+.|+|++.+...++
T Consensus 347 s~eF~~a--~~~Hslip--~~~~~~-----~~~~~l~~~ff~p~-~~~~~gid~llrgl~~q~a~~~~~~~n~------- 409 (587)
T 3nt1_A 347 ASEFNTL--YHWHPLLP--DTFNIE-----DQEYSFKQFLYNNS-ILLEHGLTQFVESFTRQIAGRVAGGRNV------- 409 (587)
T ss_dssp BHHHHHH--TCCGGGSC--SSEEET-----TEEECHHHHTTCTH-HHHHHHHHHHHHHHHHSBCBCSSSSSCB-------
T ss_pred HHHHHHH--HhccccCC--cccccC-----CCcccHHHHhcCcc-ccchhhHHHHHHHHHHhhhhcccccccC-------
Confidence 5677766 58999853 222211 23688999999994 5566789999999999999887433332
Q ss_pred hhccccchhhhhhhhhhcccccCCCCcchhhhhHhCCCCcccHHHHHHHhhhHHHHHHHHHhhCCCCCccccCCChhHHH
Q psy11143 564 LFTTFHAVSLDLAAMNIQRGRDHGIPEYNAWREYCGLPRANTFEDLAREITDRRVRDKLQRLYGHPGFSYHDVLSPRQIE 643 (940)
Q Consensus 564 ~~~~~~~~~~d~~~~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (940)
...++||+|+|||||||||||+||+||++|||+++++|+||+. |++++++|+++|++|+
T Consensus 410 -----~~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~---~~~~~~~L~~lY~~~d------------- 468 (587)
T 3nt1_A 410 -----PIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG---EKEMAAELKALYSDID------------- 468 (587)
T ss_dssp -----CGGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS---SSHHHHHHHHHHSSGG-------------
T ss_pred -----chHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCC---CHHHHHHHHHHhCCHh-------------
Confidence 2356999999999999999999999999999999999999985 7899999999999887
Q ss_pred HHHhcccccccccccCCCcccccccccccCCcccCCCCCcccccchhhhccccccccCCCcCCCcCCCCCCCCCCCCccc
Q psy11143 644 LIANLSGCMEHQRTANCSDLCFHTKYRTIDGTCNNLQHPMWGASLTGFRRLLKPIYENGFSTPVAPILSSPMAGNIDPFV 723 (940)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (940)
+
T Consensus 469 --------------------------------------------------------------------------d----- 469 (587)
T 3nt1_A 469 --------------------------------------------------------------------------V----- 469 (587)
T ss_dssp --------------------------------------------------------------------------G-----
T ss_pred --------------------------------------------------------------------------h-----
Confidence 4
Q ss_pred ccccccccCCCCcCCccchhhhhhhhhcccCCCCccccceeecccCCCccccccchhhhhhhhccccCCCCccccceecc
Q psy11143 724 GAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILED 803 (940)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 803 (940)
||||||||+|+
T Consensus 470 ---------------------------------------------------------------------IDL~vGglaE~ 480 (587)
T 3nt1_A 470 ---------------------------------------------------------------------MELYPALLVEK 480 (587)
T ss_dssp ---------------------------------------------------------------------CCHHHHHHHSC
T ss_pred ---------------------------------------------------------------------eeeeccccccc
Confidence 45999999999
Q ss_pred ccCCCCCCcchhhhhhhh------hhhcccCCcccccCCCCCChhH-HhHhhhceeeeeeecCCCc
Q psy11143 804 QVDGGRVGPTMRCLLIDQ------FKRIRDGDRFWYENPSTFKPAQ-LTQIKQASLARVICDSGDR 862 (940)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 862 (940)
++||+++||||.|| ..| |+++|+||||| ++++|+.+| +++|++++|++|||+|++.
T Consensus 481 ~~pG~~vGpTf~ci-~~qf~l~~~~~~~r~gDrfw--~~~~Ft~~qgl~~I~~~sL~~lic~N~~~ 543 (587)
T 3nt1_A 481 PRPDAIFGETMVEL-GAPFSLKGLMGNPICSPQYW--KPSTFGGEVGFKIINTASIQSLICNNVKG 543 (587)
T ss_dssp CSTTCSSCHHHHHH-HHHHHHHHHHTSGGGSTTTS--SGGGGTSHHHHHHHHTCCHHHHHHHHSTT
T ss_pred CCCCccHHHHHHHH-HHHHHHHHHhcCcccCCccc--CcCccChHHHHHHHHHCCHHHHHHhCCCC
Confidence 99999999999999 666 59999999999 778999988 8999999999999999996
No 47
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=2.6e-31 Score=309.43 Aligned_cols=346 Identities=14% Similarity=0.251 Sum_probs=231.6
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEe---e--------------cCCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNS---L--------------DSDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~---I--------------~~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++++|.|.+.+.+ .+.|.|||+ +.. + ....++.+..+ ...|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 45567899999999999998876 678999984 221 1 01234444432 24689999
Q ss_pred cccCCCeEEEEEEEeCCC------------ceEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC-Ce
Q psy11143 106 VRESDAGVYNCVAQNSEG------------SAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PR 169 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g------------~~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p~ 169 (940)
++.+|+|.|+|.+.|..| .....+.|.|... .+|.+...+....+.+|+.++|.|.+.+. |. +.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (457)
T 1hzh_H 86 LRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (457)
T ss_dssp CCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCE
T ss_pred CCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeE
Confidence 999999999999998865 1223456666542 24555555545567899999999999986 64 79
Q ss_pred EEEeeCCeeccccC-------ceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC---------------
Q psy11143 170 ISWSKDEAEFVEDR-------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG--------------- 227 (940)
Q Consensus 170 ItW~k~g~~i~~~~-------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~--------------- 227 (940)
|+|++++..+.... .......+.|.|.++..+| |.|+|.|.|..+.......+.+..
T Consensus 166 v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 244 (457)
T 1hzh_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPEL 244 (457)
T ss_dssp EEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCC
T ss_pred EEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccc
Confidence 99999886542110 0111223479999999999 999999999877655444444321
Q ss_pred -CCCee-eeCCCeeE-EecCCeEEEEEEEeeeCCC----eEEEEECCeecCCCCce-EE-eecCeEEEEee---eccCC-
Q psy11143 228 -APPIF-IQRPVSTT-YSTGSTSRITCLVEGHPLP----QMTWFHDGNSLDSDDHV-TY-EHDGFVLVLNG---VRESD- 294 (940)
Q Consensus 228 -~~p~~-~~~p~~~~-v~~G~~v~L~C~v~G~P~p----~ItW~k~g~~l~~~~~~-~~-~~~g~sL~I~~---v~~~D- 294 (940)
.+|.+ ...+.... +.+|+.++|.|.+.|.|++ .|+|+|++..+...... .. ..++. +.+.. +...|
T Consensus 245 ~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~-~~~~~~l~i~~~d~ 323 (457)
T 1hzh_H 245 LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNST-YRVVSVLTVLHQDW 323 (457)
T ss_dssp SSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSC-EEEEEEECCCHHHH
T ss_pred cCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCc-EEEEEEEEECHHHc
Confidence 13443 33333322 5679999999999998653 99999999888643221 11 12233 44443 23444
Q ss_pred --CeEEEEEEEeCCCCceeEEEEEE--eeccCCeEEEcCCc-eeecCCCeEEEEEeecCcCCC--eEEEEeCCeeeccCC
Q psy11143 295 --AGVYNCVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFD-MRAPAGSSVEIPCKPDGEPLP--RISWSKDEAEFVEDR 367 (940)
Q Consensus 295 --sG~YtC~A~N~~Gs~~~s~~l~V--~~~~~P~i~~~p~~-~~v~~G~~vtL~C~v~g~P~p--~i~W~k~g~~i~~~~ 367 (940)
+|.|+|.|.|..+.......+.+ ....+|.+...+.. ..+..|+ ++|.|.+.|.|+| .|+|+|+|..+....
T Consensus 324 ~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 402 (457)
T 1hzh_H 324 LNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYK 402 (457)
T ss_dssp HHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEE
T ss_pred cCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECccee
Confidence 99999999988666544444433 34567877765543 2344555 9999999997544 999999998875322
Q ss_pred c--EEEeee------ceEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 368 N--HKIHRT------GSLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 368 ~--~~i~~~------~sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
. .....+ +.|.|.....+|.|.|+|.|.|..-
T Consensus 403 ~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 403 TTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 1 111122 2456666666789999999999754
No 48
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.98 E-value=7.4e-32 Score=296.19 Aligned_cols=273 Identities=20% Similarity=0.319 Sum_probs=218.4
Q ss_pred CCeeEecCCceeecCCCcEEEEEEeCCC-CCCeEEEeeCCeeccccCceEEe-eeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 138 APRLVVKPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHKIH-RTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 138 ~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p~ItW~k~g~~i~~~~~~~~~-~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
+|.+.. +.+..+.+|++++|.|.+.+. |.+.++|++++..+....++... ....|.|.+++.+|+|.|+|.+.|..|
T Consensus 7 ~P~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 85 (317)
T 2y25_A 7 GPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRG 85 (317)
T ss_dssp CCEEEE-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSC
T ss_pred CCcEee-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCC
Confidence 466664 446889999999999999887 78899999999988766555443 235899999999999999999999999
Q ss_pred ceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEee----------eCCCeEEEEECCeecCCCCceEEeecCe--
Q psy11143 216 EDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEG----------HPLPQMTWFHDGNSLDSDDHVTYEHDGF-- 283 (940)
Q Consensus 216 ~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G----------~P~p~ItW~k~g~~l~~~~~~~~~~~g~-- 283 (940)
.....+.|.|.. +|.+...+....+..|+.+.|.|.+.+ .|.+.++|++++..+..+.++.+...+.
T Consensus 86 ~~~~~~~l~v~~-~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 2y25_A 86 KDKSRLKLVDEA-FKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQI 164 (317)
T ss_dssp EEEEEECCSTHH-HHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEE
T ss_pred cEEEEEEEEEec-CccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEE
Confidence 887777776652 222222233344556777777777766 6899999999999998877777655543
Q ss_pred EEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee------------------ccCCeEEEc-CCceeecCCCeEEEEE
Q psy11143 284 VLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING------------------HRAPRLVVK-PFDMRAPAGSSVEIPC 344 (940)
Q Consensus 284 sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~------------------~~~P~i~~~-p~~~~v~~G~~vtL~C 344 (940)
.|.|.++..+|+|.|+|.|.|..|....+..+.|.. ..+|.+... +....+.+|+.++|.|
T Consensus 165 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C 244 (317)
T 2y25_A 165 WLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTC 244 (317)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEE
T ss_pred EEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEE
Confidence 499999999999999999999999887777666431 124555543 4557889999999999
Q ss_pred eecCcCCCeEEEEeCCeeeccCCcEEEeee-c---eEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 345 KPDGEPLPRISWSKDEAEFVEDRNHKIHRT-G---SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 345 ~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~-~---sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
.+.|.|.|.|.|++++..+..+.++.+... + +|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..|
T Consensus 245 ~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 245 NVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp EEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 999999999999999999988777777554 4 8999999999999999999999999999999999865
No 49
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.98 E-value=1e-31 Score=309.75 Aligned_cols=306 Identities=19% Similarity=0.288 Sum_probs=217.5
Q ss_pred ccEEEECCCCCCCCeEEEEEEEcCCceE-EEEEEEEEe---CCCeEEeCCCcEEEecCCeEEEEEEeec-cCCC-eEEEE
Q psy11143 7 STELVISGVQREHGGRYSCVAGNPAGVY-RGDLHVTVN---APPIFIQRPVSTTYSTGSTSRITCLVEG-HPLP-QMTWF 80 (940)
Q Consensus 7 ~~tL~I~~v~~sDsG~Y~C~a~n~~g~~-~~~v~l~V~---~pP~~~~~p~~~~V~eGesv~L~C~v~g-~P~p-~V~W~ 80 (940)
..+|+|.+++.+|+|.|+|.|.|..+.. .....|.|. .+|.+...+....+.+|+.++|.|.+.+ .|.+ .|+|+
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 153 (438)
T 1qgc_4 74 DFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWK 153 (438)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEE
T ss_pred cEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEE
Confidence 4689999999999999999999987632 233445554 3676666444433457889999999987 6777 99999
Q ss_pred ECCEeecCCCCeEEE----ee-----ceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeec
Q psy11143 81 HDGNSLDSDDHVTYE----HD-----GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAP 151 (940)
Q Consensus 81 kdg~~I~~~~~~~~~----~~-----gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~ 151 (940)
|+|..+......... .+ ...|.|.++..+|+|.|+|.|.|..+...... .+.....+.....+....+.
T Consensus 154 k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~ 231 (438)
T 1qgc_4 154 IDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK--SFNRNECEVMLVESGGGLVK 231 (438)
T ss_dssp ETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEE--EEETTC-CCEEEEECCEEEC
T ss_pred ECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceec--ccccccceeEEecCCceEEe
Confidence 999988654111111 11 23579999999999999999999988754333 33332333444556677899
Q ss_pred CCCcEEEEEEeCCCC--CCeEEEeeC--Ceecc-----------------ccCceEEee-----eceEEEeecccCCCce
Q psy11143 152 AGSSVEIPCKPDGEP--LPRISWSKD--EAEFV-----------------EDRNHKIHR-----TGSLRLYNIGPQDSGL 205 (940)
Q Consensus 152 ~Ge~vtL~C~v~g~P--~p~ItW~k~--g~~i~-----------------~~~~~~~~~-----~~sL~I~~v~~~DsG~ 205 (940)
+|++++|.|.+.|.| .+.+.|+++ +..+. ...++.+.. ...|.|.+++.+|+|.
T Consensus 232 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 311 (438)
T 1qgc_4 232 PGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAM 311 (438)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCE
T ss_pred cCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEE
Confidence 999999999999988 679999996 44331 123444433 2379999999999999
Q ss_pred EEEEEEcCCc-----ceeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEeee-CCC-eEEEEECCeecCCCCc
Q psy11143 206 YRCTASNLLG-----EDVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP-QMTWFHDGNSLDSDDH 275 (940)
Q Consensus 206 YtC~a~N~~g-----~~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p-~ItW~k~g~~l~~~~~ 275 (940)
|+|.|.|..+ .......+.|.. .+|.+...+....+.+|+.++|.|.+.|. |.| .|+|+++|..+.....
T Consensus 312 Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~ 391 (438)
T 1qgc_4 312 YYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTF 391 (438)
T ss_dssp EEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEEC
T ss_pred EEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeec
Confidence 9999998544 222344566653 23444444434456789999999999997 888 9999999987753211
Q ss_pred eEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEE
Q psy11143 276 VTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMI 315 (940)
Q Consensus 276 ~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l 315 (940)
..+...+ +.|.|.++..+| |.|+|.|.|..|.......+
T Consensus 392 ~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 392 PAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp CCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred CccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 1111122 248999999888 99999999999987655443
No 50
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=99.98 E-value=1.2e-34 Score=340.39 Aligned_cols=191 Identities=20% Similarity=0.300 Sum_probs=161.2
Q ss_pred cceeeeccchhhhhheeeEEEEeecccccccccccccccccCcccccccCCCCchhhccccCcCccCCCCccccHHHHHh
Q psy11143 484 ARTVVRAADVYERTLSHIKKHIQAGVKMNLSEDLSLGKAFFSPWRLVDEGGVDPLLRGFITSPAKRKRPTENLNKELTDK 563 (940)
Q Consensus 484 ~~~~~~Aa~~fg~t~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (940)
..||+.| +| +|+++.- .+... .+.+.|.++||+|.. +.+++++++++||+.|+|++.+...+.
T Consensus 347 s~EF~~a-yR-~Hslip~--~~~~~-----~~~~~l~~~ff~~~~-~~~~g~~~ll~g~~~q~a~~~~~~~n~------- 409 (553)
T 1q4g_A 347 AMEFNQL-YH-WHPLMPD--SFRVG-----PQDYSYEQFLFNTSM-LVDYGVEALVDAFSRQPAGRIGGGRNI------- 409 (553)
T ss_dssp BHHHHHH-TC-CGGGSCS--SEEET-----TEEECHHHHTTCSSH-HHHHCHHHHHHHHHHSBCBCSSSSSCB-------
T ss_pred hHHHHHH-hc-ccccCCc--ccccC-----CCcccHHHHhcCchh-hhcccHHHHHHHhhhchhhcccccccC-------
Confidence 5678754 66 8998632 22211 235788999999954 556789999999999999886311111
Q ss_pred hhccccchhhhhhhhhhcccccCCCCcchhhhhHhCCCCcccHHHHHHHhhhHHHHHHHHHhhCCCCCccccCCChhHHH
Q psy11143 564 LFTTFHAVSLDLAAMNIQRGRDHGIPEYNAWREYCGLPRANTFEDLAREITDRRVRDKLQRLYGHPGFSYHDVLSPRQIE 643 (940)
Q Consensus 564 ~~~~~~~~~~d~~~~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (940)
....+||+|+|||||||||||+||+||++|||+++++|+||+. |++++++|+++|++|+
T Consensus 410 -----~~~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~---d~~~~~~L~~lY~~~d------------- 468 (553)
T 1q4g_A 410 -----DHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG---EKEMAAELEELYGDID------------- 468 (553)
T ss_dssp -----CTTTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS---SSHHHHHHHHHHSSGG-------------
T ss_pred -----cHHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhcC---CHHHHHHHHHHhcChh-------------
Confidence 1346999999999999999999999999999999999999985 8999999999999887
Q ss_pred HHHhcccccccccccCCCcccccccccccCCcccCCCCCcccccchhhhccccccccCCCcCCCcCCCCCCCCCCCCccc
Q psy11143 644 LIANLSGCMEHQRTANCSDLCFHTKYRTIDGTCNNLQHPMWGASLTGFRRLLKPIYENGFSTPVAPILSSPMAGNIDPFV 723 (940)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (940)
+
T Consensus 469 --------------------------------------------------------------------------d----- 469 (553)
T 1q4g_A 469 --------------------------------------------------------------------------A----- 469 (553)
T ss_dssp --------------------------------------------------------------------------G-----
T ss_pred --------------------------------------------------------------------------h-----
Confidence 4
Q ss_pred ccccccccCCCCcCCccchhhhhhhhhcccCCCCccccceeecccCCCccccccchhhhhhhhccccCCCCccccceecc
Q psy11143 724 GAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILED 803 (940)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 803 (940)
||||||||+|+
T Consensus 470 ---------------------------------------------------------------------iDL~vG~laE~ 480 (553)
T 1q4g_A 470 ---------------------------------------------------------------------LEFYPGLLLEK 480 (553)
T ss_dssp ---------------------------------------------------------------------CCHHHHHHHSC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 45999999999
Q ss_pred ccCCCCCCcchhhhhhh-hhhhcc---cCCcccccCCCCCChhHHhHhhh-ceeeeeeecCCC
Q psy11143 804 QVDGGRVGPTMRCLLID-QFKRIR---DGDRFWYENPSTFKPAQLTQIKQ-ASLARVICDSGD 861 (940)
Q Consensus 804 ~~~~~~~~~~~~~~~~~-~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 861 (940)
++||+++||||.||+++ ||+|++ .|||||| +++.|+++|+.||++ ++|++|||+|++
T Consensus 481 ~~~G~~~Gpt~~~ii~~~~~~~l~~~~~~d~~~~-~~~~ft~~ql~ei~~~~sla~iic~n~~ 542 (553)
T 1q4g_A 481 CHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYW-KASTFGGEVGFNLVKTATLKKLVCLNTK 542 (553)
T ss_dssp BCTTCSSBHHHHHHHHHHHHHHHHTSGGGSTTTC-SGGGGTSHHHHHHHHTCCHHHHHHTTSS
T ss_pred cCCCCCccHHHHHHHHHHHHHHHhhCcCCCcccc-CCCCcCHHHHHHHHHhCCHHHHHHHcCC
Confidence 99999999999999998 799997 5999888 789999999999976 699999999998
No 51
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.98 E-value=1.5e-31 Score=293.71 Aligned_cols=273 Identities=21% Similarity=0.355 Sum_probs=216.6
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeecc-CCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~-P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.|. .|.+..+.+|+.++|.|.+.+. |.+.|.|+|+|..+....+..+......|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~~P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 84 (317)
T 2y25_A 6 TGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDR 84 (317)
T ss_dssp SCCEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSS
T ss_pred CCCcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCC
Confidence 467776 4456899999999999999887 77899999999999877666666556778999999999999999999998
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCC----------CCCCeEEEeeCCeeccccCceEEeeec-
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG----------EPLPRISWSKDEAEFVEDRNHKIHRTG- 191 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g----------~P~p~ItW~k~g~~i~~~~~~~~~~~~- 191 (940)
|.......|.|. ..|.+...+....+.+|+.+.|.|.+.+ .|.+.++|++++..+....+......+
T Consensus 85 g~~~~~~~l~v~--~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 85 GKDKSRLKLVDE--AFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp CEEEEEECCSTH--HHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CcEEEEEEEEEe--cCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 876555444433 2333333344556678888888888776 789999999999988776665554332
Q ss_pred --eEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC-------------------CCCeeee-CCCeeEEecCCeEEE
Q psy11143 192 --SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG-------------------APPIFIQ-RPVSTTYSTGSTSRI 249 (940)
Q Consensus 192 --sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~-------------------~~p~~~~-~p~~~~v~~G~~v~L 249 (940)
.|.|.+++.+|+|.|+|.|.|..|.......+.+.. .+|.+.. .+....+..|+.+.|
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 242 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 242 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCE
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEE
Confidence 499999999999999999999998888777776531 1233333 456678999999999
Q ss_pred EEEEeeeCCCeEEEEECCeecCCCCceEEeec-C--eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 250 TCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD-G--FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 250 ~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~-g--~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
.|.+.|.|.|.+.|+++|..+....++.+... + ..|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 243 ~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 243 TCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 99999999999999999999988877777654 3 3699999999999999999999999998888888753
No 52
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.98 E-value=9.5e-32 Score=303.05 Aligned_cols=267 Identities=17% Similarity=0.198 Sum_probs=210.4
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEe
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNS 85 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~ 85 (940)
+..+|+|.+++.+|+|.|+|.+.|..+ .+.|.|.. +...|. ..+.+|+.++|.|.+.+.|.+.|.|++++..
T Consensus 65 ~~~~L~I~~v~~~D~G~Y~C~~~n~~~----~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~ 136 (363)
T 1wio_A 65 GNFPLIIKNLKIEDSDTYICEVEDQKE----EVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGK 136 (363)
T ss_dssp TCCCEEECSCCGGGCEEEEEEETTEEE----EEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSC
T ss_pred CeEEEEECCCCHHHCEEEEEEEEECCC----cEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCc
Confidence 466899999999999999999998643 45555553 233333 4678999999999999999999999999865
Q ss_pred ecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCC-
Q psy11143 86 LDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG- 164 (940)
Q Consensus 86 I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g- 164 (940)
+ ......|.|.+++.+|+|.|+|.|.|..+.....+.+.|...+. . +....+.+|+.+.|.|.+.+
T Consensus 137 ~--------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~--~---~~~~~~~~G~~v~l~C~~~~~ 203 (363)
T 1wio_A 137 N--------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK--A---SSIVYKKEGEQVEFSFPLAFT 203 (363)
T ss_dssp E--------EEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC--S---EEEEEEETBCCEEEECCCCCC
T ss_pred c--------cccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC--C---CCceEEecCCEEEEEEEEecc
Confidence 4 23445679999999999999999999866655555666653222 1 14567889999999998887
Q ss_pred ----CCCCeEEEeeCCeeccc--------cCceEEee-------------eceEEEeecccCCCceEEEEEEcC--Ccce
Q psy11143 165 ----EPLPRISWSKDEAEFVE--------DRNHKIHR-------------TGSLRLYNIGPQDSGLYRCTASNL--LGED 217 (940)
Q Consensus 165 ----~P~p~ItW~k~g~~i~~--------~~~~~~~~-------------~~sL~I~~v~~~DsG~YtC~a~N~--~g~~ 217 (940)
.|.+.++|+++|..+.. ...+.+.. ...|.|.+++.+|+|.|+|.|.|. .|..
T Consensus 204 ~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~ 283 (363)
T 1wio_A 204 VEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKL 283 (363)
T ss_dssp CCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCE
T ss_pred cccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeE
Confidence 78889999999987765 34443322 338999999999999999999999 8988
Q ss_pred eeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCe--EEEEECCeecCCCCceEEeecCeEEEEeeeccCCC
Q psy11143 218 VAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ--MTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDA 295 (940)
Q Consensus 218 s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~--ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~Ds 295 (940)
+..+.|.|.. ..|+.+.|.|.+.|.|.|. ++|++++..+..+ ..|.|.++..+|+
T Consensus 284 ~~~~~l~V~~--------------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~---------~~l~i~~v~~~d~ 340 (363)
T 1wio_A 284 HQEVNLVVMR--------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVS---------KREKAVWVLNPEA 340 (363)
T ss_dssp EEEEEEEEEE--------------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEE---------ESSSEEEESSCCS
T ss_pred EEEEeEEEEE--------------ecCCCeeEEEEEccccCCCccEEEEeCCCceeee---------eeeeeeeeccccc
Confidence 8888887761 1288999999999999988 9999999877632 2278899999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEE
Q psy11143 296 GVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 296 G~YtC~A~N~~Gs~~~s~~l~V 317 (940)
|.|+|.|.|. |....+..+.|
T Consensus 341 G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 341 GMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp EEEEEEECSS-SSCCEEEEEEE
T ss_pred eeEEEEEecC-CeEEEecceEe
Confidence 9999999965 55555666665
No 53
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=8.6e-30 Score=298.32 Aligned_cols=349 Identities=16% Similarity=0.266 Sum_probs=233.1
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---ec--------------CCCCeEEEee----ceEEEE
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---LD--------------SDDHVTYEHD----GFVLVL 103 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I~--------------~~~~~~~~~~----gs~L~I 103 (940)
+.+|..+.+.+|++++|.|.+.+.+ .+.|.|||+. .. +. ...++.+..+ ...|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (475)
T 1iga_A 5 LEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGL 84 (475)
T ss_pred eccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEE
Confidence 4557788999999999999998764 5689999853 21 10 0123333321 246899
Q ss_pred cccccCCCeEEEEEEEeCCCc------eEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC-C-eEEE
Q psy11143 104 NGVRESDAGVYNCVAQNSEGS------AESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-P-RISW 172 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~------~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p-~ItW 172 (940)
.+++.+|+|.|+|.+.+..|. ....+.|.|... ..|.+...+. ..+.+|+.++|.|.+.|. |. + .|+|
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~W 163 (475)
T 1iga_A 85 SSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSVTW 163 (475)
T ss_pred CCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEEEE
Confidence 999999999999999998652 122456666532 2344444332 233789999999999986 65 5 9999
Q ss_pred eeCCeecccc--------CceEEeeeceEEEeecccCCCceEEEEEEcCCcce-eeeeeeeecC----------------
Q psy11143 173 SKDEAEFVED--------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVTG---------------- 227 (940)
Q Consensus 173 ~k~g~~i~~~--------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~---------------- 227 (940)
++++...... ........+.|.|..+..+|+|.|+|.|.|..+.. ...+.+.|..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~ 243 (475)
T 1iga_A 164 SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPS 243 (475)
T ss_pred cCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCC
Confidence 9987532110 00112223468888888899999999999987642 2222322210
Q ss_pred -CCCee-eeCCCeeEEecCCeEEEEEEEeeeCC---CeEEEEECCeecCCCCc--eEEee-----cCeEEEEeeeccCCC
Q psy11143 228 -APPIF-IQRPVSTTYSTGSTSRITCLVEGHPL---PQMTWFHDGNSLDSDDH--VTYEH-----DGFVLVLNGVRESDA 295 (940)
Q Consensus 228 -~~p~~-~~~p~~~~v~~G~~v~L~C~v~G~P~---p~ItW~k~g~~l~~~~~--~~~~~-----~g~sL~I~~v~~~Ds 295 (940)
.+|.+ ...+....+.+|+.++|.|.+.|.++ +.|+| ++..+..... ..... ....|.|.++..+|+
T Consensus 244 ~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~ 321 (475)
T 1iga_A 244 CCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHG 321 (475)
T ss_pred CCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccC
Confidence 13333 33333334689999999999998754 69999 4444432111 01110 123499999999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEE-eeccCCeEEEcCCc-eeecCCCeEEEEEeecCcCC--CeEEEEeCCeeeccCCcE--
Q psy11143 296 GVYNCVAQNSEGSAESVAMIRI-NGHRAPRLVVKPFD-MRAPAGSSVEIPCKPDGEPL--PRISWSKDEAEFVEDRNH-- 369 (940)
Q Consensus 296 G~YtC~A~N~~Gs~~~s~~l~V-~~~~~P~i~~~p~~-~~v~~G~~vtL~C~v~g~P~--p~i~W~k~g~~i~~~~~~-- 369 (940)
|.|+|.|.|..+.......+.+ ....+|.+.+.+.. ..+..|+.++|.|.+.|.++ +.|.|+|+|..+......
T Consensus 322 G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 401 (475)
T 1iga_A 322 KTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTW 401 (475)
T ss_pred CcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeec
Confidence 9999999999988755555543 22467777665543 34678999999999998643 499999999887644211
Q ss_pred --EE---------eeeceEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 370 --KI---------HRTGSLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 370 --~i---------~~~~sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
.. ...+.|.|.....+|.|.|+|.|.|....
T Consensus 402 ~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 402 ASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred ccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 11 12235777777778899999999997654
No 54
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=6.8e-33 Score=320.57 Aligned_cols=349 Identities=15% Similarity=0.238 Sum_probs=237.1
Q ss_pred eCCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Eee----c-------------CCCCeEEEee----ceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL----D-------------SDDHVTYEHD----GFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~I----~-------------~~~~~~~~~~----gs~L~I~ 104 (940)
.++..+.+.+|++++|.|.+.+.+ .+.|.|+|++ ..+ . ...++.+..+ ...|.|.
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 345677899999999999998764 6789999863 221 0 0123333322 2358999
Q ss_pred ccccCCCeEEEEEEEeCCCceEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCeecc
Q psy11143 105 GVRESDAGVYNCVAQNSEGSAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFV 180 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~i~ 180 (940)
+++.+|+|.|+|.+.|..+.....+.|.|... .+|.+...+....+.+|+.++|.|.+.|. |.+ .|+|++++..+.
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~ 163 (434)
T 1igy_B 84 SLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 163 (434)
T ss_dssp SBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSS
T ss_pred CCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCC
Confidence 99999999999999986444334556777532 23555443434456899999999999985 776 999999886531
Q ss_pred cc------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC------------CCCeeeeCCCeeE-E
Q psy11143 181 ED------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG------------APPIFIQRPVSTT-Y 241 (940)
Q Consensus 181 ~~------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~------------~~p~~~~~p~~~~-v 241 (940)
.. ........+.|.|.++..+| |.|+|.|.|..+.......+.+.. .+..+...+.... +
T Consensus 164 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v 242 (434)
T 1igy_B 164 VHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTL 242 (434)
T ss_dssp EEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHH
T ss_pred eEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhc
Confidence 10 00112233569999999888 999999999988755444443320 1222233333222 7
Q ss_pred ecCCeEEEEEEEeeeC----CCeEEEEECCeecCCCCceEE--eec-----CeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 242 STGSTSRITCLVEGHP----LPQMTWFHDGNSLDSDDHVTY--EHD-----GFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 242 ~~G~~v~L~C~v~G~P----~p~ItW~k~g~~l~~~~~~~~--~~~-----g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
.+|+.++|.|.+.|.+ .+.|+|+|++..+........ ..+ ...|.|.++..+|+|.|+|.|.|..|...
T Consensus 243 ~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 322 (434)
T 1igy_B 243 LITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAP 322 (434)
T ss_dssp STTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSC
T ss_pred ccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCc
Confidence 8899999999999984 358999999987753321110 011 12499999999999999999999988764
Q ss_pred eEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeeccCCcEE--------EeeeceEE
Q psy11143 311 SVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVEDRNHK--------IHRTGSLR 378 (940)
Q Consensus 311 ~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~~~~~~~--------i~~~~sL~ 378 (940)
....+.+ ....+|.+...+.......|+.++|.|.+.|. |.+ .|+|+|+|..+....... ....+.|.
T Consensus 323 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~ 402 (434)
T 1igy_B 323 IEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLN 402 (434)
T ss_dssp CCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEE
T ss_pred eeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEE
Confidence 3333332 44567877766554434567789999999985 433 999999998774321111 11223567
Q ss_pred EecCCCCCCeEEEEEEEeCCe
Q psy11143 379 LYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 379 I~~v~~~D~G~YtC~A~N~~G 399 (940)
|.....+|.|.|+|.|.|...
T Consensus 403 i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 403 VQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp EEHHHHHTTCCEEEEEEETTS
T ss_pred ECchhccCCCEEEEEEEcCCC
Confidence 777777889999999999754
No 55
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=4.2e-30 Score=279.61 Aligned_cols=263 Identities=17% Similarity=0.265 Sum_probs=209.4
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcc
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
.+|.+...+....+.+|++++|.|.+.+ .++|++++..+ ......++.|.|.+++.+|+|.|+|.+.| |.
T Consensus 11 ~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~ 80 (290)
T 2o26_X 11 SPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----EMVENKKNEWIQEKAEATRTGTYTCSNSN--GL 80 (290)
T ss_dssp -CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS----CEEEECSSEEEETTCCGGGCEEEEEEESS--SC
T ss_pred CCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce----eeecCCCceEEEeccCHHhCeEEEEEeeC--Cc
Confidence 4577777778889999999999999988 89999998876 12222347899999999999999999999 44
Q ss_pred eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCC-CeEEEE-ECCeecCCCCceEEeecCeEEEEeeeccCC
Q psy11143 217 DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPL-PQMTWF-HDGNSLDSDDHVTYEHDGFVLVLNGVRESD 294 (940)
Q Consensus 217 ~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~-p~ItW~-k~g~~l~~~~~~~~~~~g~sL~I~~v~~~D 294 (940)
+..+.|.|.. +|.....+....+.+|+.+.|.|.+.+ |. +.++|+ ++|..+....++.....+ .|.|.++..+|
T Consensus 81 -~~~~~l~V~~-~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~-~L~i~~v~~~d 156 (290)
T 2o26_X 81 -TSSIYVFVRD-PAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKA-GITIKNVKRAY 156 (290)
T ss_dssp -EEEEEEEEEC-SSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTT-EEEEESCCGGG
T ss_pred -cEEEEEEEeC-CCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCC-CEEEecccHHH
Confidence 6677888874 333336667788889999999999996 77 899995 688888776666665555 49999999999
Q ss_pred Ce-EEEEEEEeCCCCcee-EEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecCcCCCe-EEEEeCCeee----cc
Q psy11143 295 AG-VYNCVAQNSEGSAES-VAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPR-ISWSKDEAEF----VE 365 (940)
Q Consensus 295 sG-~YtC~A~N~~Gs~~~-s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~-i~W~k~g~~i----~~ 365 (940)
+| .|+|.|.|..+.... .+.+.|. ...+|.+...+....+.+|++++|.|.+.|.|.|. |.|++++..+ ..
T Consensus 157 ~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~ 236 (290)
T 2o26_X 157 HRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQV 236 (290)
T ss_dssp TTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCE
T ss_pred CCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceee
Confidence 99 999999998554332 4566665 34788888888888899999999999999999996 9999998763 22
Q ss_pred CCcE------EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 366 DRNH------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 366 ~~~~------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
.... .....++|.|.++..+|+|.|+|.|.|..|..+..+.|.|.++|
T Consensus 237 ~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 237 KHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp ECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred cccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 2211 22345689999999999999999999999999999999987653
No 56
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=278.21 Aligned_cols=265 Identities=16% Similarity=0.292 Sum_probs=206.2
Q ss_pred CCcEEEecCCeEEEEEEee-ccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeCCCceEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGSAESV 128 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~-g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~ 128 (940)
+..+.|.+|+.+.|.|... +.|.+.|.|+|++..+....+..+...+ ..|.|.+++.+|+|.|+|.+.|..|... +
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s 86 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-S 86 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-E
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-E
Confidence 3457788999999999885 5788999999999999877787777655 6789999999999999999999888554 4
Q ss_pred EEEEEeccc----------CCeeEecCC-ceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeeccccCceEEeeec-----
Q psy11143 129 AMIRINGHR----------APRLVVKPF-DMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTG----- 191 (940)
Q Consensus 129 ~~L~V~~~~----------~P~~~~~p~-~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~~~~~~~~~~~~----- 191 (940)
..+.|.... .|.+...+. ...+.+|+.+.|.|.+. +.|.+.++|++++..+....++.+....
T Consensus 87 ~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~ 166 (312)
T 2y23_A 87 YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGII 166 (312)
T ss_dssp EEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEE
T ss_pred EEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEE
Confidence 445543210 344444333 77899999999999999 8999999999999998877666555433
Q ss_pred eEEEeecccCCCceEEEEEEcCCcceeeeeeee------------------ecCCCCeeeeCCCeeEEecCCeEEEEEEE
Q psy11143 192 SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT------------------VTGAPPIFIQRPVSTTYSTGSTSRITCLV 253 (940)
Q Consensus 192 sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~------------------V~~~~p~~~~~p~~~~v~~G~~v~L~C~v 253 (940)
.|.|.+++.+|+|.|+|.+.+..........+. +...+|.+... ....+.+|+.+.|.|.+
T Consensus 167 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~v~~G~~~~l~C~~ 245 (312)
T 2y23_A 167 EMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LSWEVTGECNVLLKCKV 245 (312)
T ss_dssp EEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-EEEEEETTTEEEEEEEE
T ss_pred EEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeec-ceEEEeCCCEEEEEEEE
Confidence 399999999999999999987554443333321 00123444432 23678899999999999
Q ss_pred eeeCCC-eEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 254 EGHPLP-QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 254 ~G~P~p-~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.|.|.| .++|++++..+..+.++.+......|.|.++..+|+|.|+|.|.|..|....++.|.++
T Consensus 246 ~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 246 ANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp ESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred cCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 999998 99999999999866666655444569999999999999999999999999888877654
No 57
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=276.69 Aligned_cols=261 Identities=16% Similarity=0.273 Sum_probs=206.0
Q ss_pred CceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeeccccCceEEeeec---eEEEeecccCCCceEEEEEEcCCcceeeee
Q psy11143 146 FDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNLLGEDVAEG 221 (940)
Q Consensus 146 ~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~~~~~~~~~~~~---sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~ 221 (940)
..+.+.+|+.+.|.|... +.|.+.++|++++..+....++.+...+ .|.|.+++.+|+|.|+|.+.|..|... +.
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~ 87 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SY 87 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EE
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EE
Confidence 356788999999999886 5789999999999999877777665543 799999999999999999999888544 45
Q ss_pred eeeecC-----------CCCeeeeCC-CeeEEecCCeEEEEEEEe-eeCCCeEEEEECCeecCCCCceEEeec----CeE
Q psy11143 222 YLTVTG-----------APPIFIQRP-VSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDSDDHVTYEHD----GFV 284 (940)
Q Consensus 222 ~L~V~~-----------~~p~~~~~p-~~~~v~~G~~v~L~C~v~-G~P~p~ItW~k~g~~l~~~~~~~~~~~----g~s 284 (940)
.+.|.. .+|.+...+ ....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+..+ ..+
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~ 167 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 167 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEE
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEE
Confidence 555542 044444333 377889999999999999 899999999999999988776665543 234
Q ss_pred EEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe-------------------eccCCeEEEcCCceeecCCCeEEEEEe
Q psy11143 285 LVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN-------------------GHRAPRLVVKPFDMRAPAGSSVEIPCK 345 (940)
Q Consensus 285 L~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~-------------------~~~~P~i~~~p~~~~v~~G~~vtL~C~ 345 (940)
|.|.++..+|+|.|+|.|.|..+.... .+.+. ...+|.+.... ...+.+|++++|.|.
T Consensus 168 L~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~ 244 (312)
T 2y23_A 168 MFMEKLQDEDEGTYTFQLQDGKATNHS--TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCK 244 (312)
T ss_dssp EEESCCCGGGCEEEEEEEESSSCEEEE--EEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEE
T ss_pred EEEccCCcccCEeEEEEEEeCCceEEE--EEEEcchhhhhhcccccccccchhhccCCceeecc-eEEEeCCCEEEEEEE
Confidence 999999999999999999875544433 33331 12346666433 367889999999999
Q ss_pred ecCcCCC-eEEEEeCCeeeccCCcEEEee-eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 346 PDGEPLP-RISWSKDEAEFVEDRNHKIHR-TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 346 v~g~P~p-~i~W~k~g~~i~~~~~~~i~~-~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
+.|.|.| .|.|+|++..+..+.++.+.. .++|.|.+++.+|+|.|+|.|.|..|....++.|.|+
T Consensus 245 ~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 245 VANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 9999998 999999999987665555543 3689999999999999999999999999999988765
No 58
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=3.1e-29 Score=276.32 Aligned_cols=269 Identities=18% Similarity=0.315 Sum_probs=208.4
Q ss_pred eEecCCceeecCCCcEEEEEEeCCCCCC-----eEEEeeCCeecc-------------ccCceEEe--------eeceEE
Q psy11143 141 LVVKPFDMRAPAGSSVEIPCKPDGEPLP-----RISWSKDEAEFV-------------EDRNHKIH--------RTGSLR 194 (940)
Q Consensus 141 ~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-----~ItW~k~g~~i~-------------~~~~~~~~--------~~~sL~ 194 (940)
++..|.++.+..|++++|.|.+.+.+.+ .|+|+|++.... ...+.... .+.+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 3456677888999999999999876655 499999775321 11222221 235799
Q ss_pred EeecccCCCceEEEEEEc-CCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEe-eeCCCeEEEEECCeecCC
Q psy11143 195 LYNIGPQDSGLYRCTASN-LLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDS 272 (940)
Q Consensus 195 I~~v~~~DsG~YtC~a~N-~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~-G~P~p~ItW~k~g~~l~~ 272 (940)
|.+++.+|+|.|+|.+.+ ..+..+..+.|.+. .+|.....+....+..|+.+.+.|.+. +.|.+.+.|++++..+..
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~-~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~ 161 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL-AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPN 161 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCB-BCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeec-cCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccc
Confidence 999999999999998864 45666777777777 455555555566677889999999875 789999999999887754
Q ss_pred CCceEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCC-ceeecCCCeEEEEEee
Q psy11143 273 DDHVTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPF-DMRAPAGSSVEIPCKP 346 (940)
Q Consensus 273 ~~~~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~-~~~v~~G~~vtL~C~v 346 (940)
........++ +.|.|.....+|+|.|+|.|.|..+.......+.+.+..+|.+...+. ...+..|+.++|.|.+
T Consensus 162 ~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~ 241 (313)
T 4fqp_A 162 TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDA 241 (313)
T ss_dssp EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEE
T ss_pred cceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEe
Confidence 3332222222 248888999999999999999998887777777776667888765543 4456778999999999
Q ss_pred cCcCCC-eEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 347 DGEPLP-RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 347 ~g~P~p-~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
.|+|.| .|+|+|++..+... ....+++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+.+|
T Consensus 242 ~g~P~p~~v~W~~~~~~l~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 242 RSNPEPTGYNWSTTMGPLPPF---AVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp EEESCCCEEEEEETTBSCCTT---EEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred cCCCCCcEEEEEECCEECCCc---eEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 999999 69999999887644 23456789999999999999999999999999999999998764
No 59
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.2e-29 Score=273.92 Aligned_cols=261 Identities=17% Similarity=0.227 Sum_probs=207.2
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
..+|.+...+....+.+|++++|.|.+.+ .|.|+|++..+ ......+..|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~-----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n-- 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN-----EMVENKKNEWIQEKAEATRTGTYTCSNSN-- 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS-----CEEEECSSEEEETTCCGGGCEEEEEEESS--
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce-----eeecCCCceEEEeccCHHhCeEEEEEeeC--
Confidence 45788888888999999999999999987 89999999876 12234457789999999999999999998
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCC-CeEEEe-eCCeeccccCceEEeeeceEEEeeccc
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL-PRISWS-KDEAEFVEDRNHKIHRTGSLRLYNIGP 200 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~-p~ItW~-k~g~~i~~~~~~~~~~~~sL~I~~v~~ 200 (940)
|. ...+.|.|...+.+ ...+....+.+|+.+.|.|.+.+ |. +.++|+ +++..+....++.....+.|.|.+++.
T Consensus 79 g~-~~~~~l~V~~~~~~--~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~ 154 (290)
T 2o26_X 79 GL-TSSIYVFVRDPAKL--FLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKR 154 (290)
T ss_dssp SC-EEEEEEEEECSSCC--BCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCG
T ss_pred Cc-cEEEEEEEeCCCcc--cccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccH
Confidence 43 55677777654333 35666788889999999999996 77 899995 688888766666666667899999999
Q ss_pred CCCc-eEEEEEEcCCcce-eeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCe-EEEEECCeec----
Q psy11143 201 QDSG-LYRCTASNLLGED-VAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ-MTWFHDGNSL---- 270 (940)
Q Consensus 201 ~DsG-~YtC~a~N~~g~~-s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k~g~~l---- 270 (940)
+|+| .|+|.|.|..+.. +..+.|.|.. .+|.+...+....+.+|+.++|.|.+.|.|.|. ++|++++..+
T Consensus 155 ~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~ 234 (290)
T 2o26_X 155 AYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIA 234 (290)
T ss_dssp GGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECC
T ss_pred HHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccce
Confidence 9999 9999999986553 3356676652 567777777778899999999999999999996 9999998873
Q ss_pred CCCCceEEe-----ecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 271 DSDDHVTYE-----HDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 271 ~~~~~~~~~-----~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
......... .....|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 287 (290)
T 2o26_X 235 QVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVV 287 (290)
T ss_dssp CEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred eecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEE
Confidence 322222111 223459999999999999999999999999777776664
No 60
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=2.5e-29 Score=272.48 Aligned_cols=270 Identities=18% Similarity=0.289 Sum_probs=211.6
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcc
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
++|.+...+....+.+|++++|.|.+.+ .++|++++...... ........|.|.+++.+|+|.|+|.+.|..+.
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 76 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTL--DPESPGSTLTTRNATFKNTGTYRCTELEDPMA 76 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEE--CCCSSCCEEEESSCCGGGCEEEEEECCC----
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEE--eccCCccEEEEeeeccccCEEEEEEEeccCCc
Confidence 4566777777889999999999999987 49999876432110 01123457999999999999999999998888
Q ss_pred eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCe-EEEEE-CCeecCCCCceEEeecCeEEEEeeeccCC
Q psy11143 217 DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ-MTWFH-DGNSLDSDDHVTYEHDGFVLVLNGVRESD 294 (940)
Q Consensus 217 ~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k-~g~~l~~~~~~~~~~~g~sL~I~~v~~~D 294 (940)
.+..+.|.|...+..+...+....+.+|+.+.|.|.+.+.+.+. ++|++ ++..+....++.+..++. |.|.++..+|
T Consensus 77 ~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~-L~i~~v~~~d 155 (289)
T 3ejj_X 77 GSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRG-FIIRKAKVLD 155 (289)
T ss_dssp -CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTE-EEESSCCGGG
T ss_pred ceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCC-EEEeeccccc
Confidence 88888899886554467777888999999999999999977765 99986 677777776776665555 9999999999
Q ss_pred CeEEEEEEE-eCCCCceeEEEEEEeec--cCCeEEEcCCceeecCCCeEEEEEeecC-cCCCeEEEEeCCeeeccCCcEE
Q psy11143 295 AGVYNCVAQ-NSEGSAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFVEDRNHK 370 (940)
Q Consensus 295 sG~YtC~A~-N~~Gs~~~s~~l~V~~~--~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p~i~W~k~g~~i~~~~~~~ 370 (940)
+|.|+|.|. +..+..+..+.|.|... .+|.+...+....+.+|++++|.|.+.+ .|.|.|.|++++..+.......
T Consensus 156 ~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~ 235 (289)
T 3ejj_X 156 SNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSD 235 (289)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEE
T ss_pred CEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcc
Confidence 999999999 44455555666766532 5788888888888889999999999998 7999999999998875432221
Q ss_pred -----EeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 371 -----IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 371 -----i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
....++|.|.+++.+|+|.|+|.|.|..|..++++.|.+..++
T Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 236 FQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp ECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred cccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 2235689999999999999999999999999999999887653
No 61
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=2e-29 Score=280.41 Aligned_cols=258 Identities=17% Similarity=0.256 Sum_probs=201.7
Q ss_pred CceeecCCCcEEEEEEeCCC---------CCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCc-eEEEEEEcCCc
Q psy11143 146 FDMRAPAGSSVEIPCKPDGE---------PLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSG-LYRCTASNLLG 215 (940)
Q Consensus 146 ~~~~v~~Ge~vtL~C~v~g~---------P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG-~YtC~a~N~~g 215 (940)
..+.+.+|+++.|.|.+.+. |.+.++|++++..+....+. ...++|.|.+++.+|+| .|+|.|.|..|
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g 114 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNGDLWIANYTSNDSHRRYLCTVTTKNG 114 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETTEEEESSCCGGGGGCCEEEEEECTTS
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecceEEEcCCChHhCCCcEEEEEEeCCC
Confidence 45678999999999998874 56799999998877654443 45778999999999999 99999999887
Q ss_pred ceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeC-CCeEEEEECCeecCCC-CceEEeecCeEEEEeeeccC
Q psy11143 216 EDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHP-LPQMTWFHDGNSLDSD-DHVTYEHDGFVLVLNGVRES 293 (940)
Q Consensus 216 ~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P-~p~ItW~k~g~~l~~~-~~~~~~~~g~sL~I~~v~~~ 293 (940)
.......+.+...+|.+...+....+.+|+.+.|.|.+.|.| .|.++|+|++..+... .++... +..|.|.++..+
T Consensus 115 ~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~~~L~I~~v~~~ 192 (329)
T 3oq3_B 115 DCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS--GQNLIIHNPELE 192 (329)
T ss_dssp CEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE--TTEEEECSCCGG
T ss_pred ceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC--CCEEEEeecChh
Confidence 654444334544555544444344566799999999999999 8999999999998633 333332 456999999999
Q ss_pred CCeEEEEEEEeC--CCCceeE----EEEEEeeccCC----eEEEcCCceeecCCCeEEEEEeecCcC---CC-eEEEEeC
Q psy11143 294 DAGVYNCVAQNS--EGSAESV----AMIRINGHRAP----RLVVKPFDMRAPAGSSVEIPCKPDGEP---LP-RISWSKD 359 (940)
Q Consensus 294 DsG~YtC~A~N~--~Gs~~~s----~~l~V~~~~~P----~i~~~p~~~~v~~G~~vtL~C~v~g~P---~p-~i~W~k~ 359 (940)
|+|.|+|.|.|. .|..... +.|.|. .+| .+. .|....+.+|++++|.|.+.|.| .| .+.|+++
T Consensus 193 D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~--~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~ 269 (329)
T 3oq3_B 193 DSGRYDCYVHYDDVRIKNDIVVSRCKILTVI--PSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENP 269 (329)
T ss_dssp GCEEEEEEEEECCTTSSSCEEEEEEEEEEEE--CCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECT
T ss_pred hCEEEEEEEEecccCCCceeEEEeeEEEEEE--CCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEEC
Confidence 999999999997 6655444 445554 333 333 67778899999999999999998 77 8999999
Q ss_pred Ceee-ccCCcEEEe-------eeceEEEecCCCCCCe-EEEEEEEeCCeeEEEEEEEEEe
Q psy11143 360 EAEF-VEDRNHKIH-------RTGSLRLYNIGPQDSG-LYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 360 g~~i-~~~~~~~i~-------~~~sL~I~~v~~~D~G-~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
+..+ ..+.+.... ..++|.|.+++.+|+| .|+|.|.|..|....++.|.|+
T Consensus 270 g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 270 SGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp TSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred CeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 9874 333332222 3568999999999999 9999999999999999988874
No 62
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=4.7e-30 Score=282.42 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=207.5
Q ss_pred CceeecCCCcEEEEEEeCCCC-CCeEEEeeCCeecc----ccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeee
Q psy11143 146 FDMRAPAGSSVEIPCKPDGEP-LPRISWSKDEAEFV----EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 220 (940)
Q Consensus 146 ~~~~v~~Ge~vtL~C~v~g~P-~p~ItW~k~g~~i~----~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s 220 (940)
....+.+|+++.|.|.+.+.| .+.++|++++..+. ...+.. ..++.|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIH-QHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSE-ECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEe-ccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 356788999999999999887 78999999886432 122333 335689999999999999999999998887777
Q ss_pred eeeeecCCCCeeeeCC---CeeEEecCCeEEEEEEE------eeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeec
Q psy11143 221 GYLTVTGAPPIFIQRP---VSTTYSTGSTSRITCLV------EGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVR 291 (940)
Q Consensus 221 ~~L~V~~~~p~~~~~p---~~~~v~~G~~v~L~C~v------~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~ 291 (940)
..+.+...+|.+...+ ....+..|+++.|.|.+ .|.|.+.++|++++..+....... ...+..|.|.++.
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~-~~~~~~L~i~~v~ 170 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF-SGVKDRLIVMNVA 170 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSE-EEETTEEEESSCC
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceE-eecCceEEEEece
Confidence 7777665566554332 23568899999999998 889999999999999987543332 3334469999999
Q ss_pred cCCCeEEEEEEE-eCCCCcee---EEEEEEee---ccCCeEEEcCCc-eeecCCCeEEEEEeecCcCCCeEEEEeCCeee
Q psy11143 292 ESDAGVYNCVAQ-NSEGSAES---VAMIRING---HRAPRLVVKPFD-MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEF 363 (940)
Q Consensus 292 ~~DsG~YtC~A~-N~~Gs~~~---s~~l~V~~---~~~P~i~~~p~~-~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i 363 (940)
.+|+|.|+|.|. |..|.... ...+.+.. ..+|.+...+.. ..+.+|++++|.|.+.|.|.|.|.|+++|..+
T Consensus 171 ~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i 250 (315)
T 1itb_B 171 EKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 250 (315)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEEC
T ss_pred ehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEEC
Confidence 999999999999 78887632 33333321 357777665553 57899999999999999999999999999988
Q ss_pred ccCCcEEE---------------eeeceEEEecCCCCC-CeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 364 VEDRNHKI---------------HRTGSLRLYNIGPQD-SGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 364 ~~~~~~~i---------------~~~~sL~I~~v~~~D-~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
........ ...+.|.|.++..+| +|.|+|.|.|..|....++.|.|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 76542211 123489999999999 9999999999999999999998764
No 63
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=5.6e-29 Score=269.79 Aligned_cols=267 Identities=16% Similarity=0.253 Sum_probs=211.9
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 123 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g 123 (940)
.+|.+...+....+.+|+.++|.|.+.+ .|.|++++.... .......+..|.|.+++.+|+|.|+|.+.|..+
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 75 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYW---TLDPESPGSTLTTRNATFKNTGTYRCTELEDPM 75 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSS---EECCCSSCCEEEESSCCGGGCEEEEEECCC---
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceE---EEeccCCccEEEEeeeccccCEEEEEEEeccCC
Confidence 4677777888899999999999999987 499998764321 112224456789999999999999999999888
Q ss_pred ceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCe-EEEee-CCeeccccCceEEeeeceEEEeecccC
Q psy11143 124 SAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPR-ISWSK-DEAEFVEDRNHKIHRTGSLRLYNIGPQ 201 (940)
Q Consensus 124 ~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~-ItW~k-~g~~i~~~~~~~~~~~~sL~I~~v~~~ 201 (940)
.....+.|.|...+.+ +...+....+.+|+++.|.|.+.+.+.+. ++|++ ++..+....++....++.|.|.+++.+
T Consensus 76 ~~~~~~~l~V~~~~~~-~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 154 (289)
T 3ejj_X 76 AGSTTIHLYVKDPAHS-WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVL 154 (289)
T ss_dssp --CEEEEEEECCSSCS-EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGG
T ss_pred cceeEEEEEEeCCCcc-eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccc
Confidence 8777888888764443 66677888999999999999999877665 99986 666666666677777788999999999
Q ss_pred CCceEEEEEE-cCCcceeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEee-eCCCeEEEEECCeecCCCCce
Q psy11143 202 DSGLYRCTAS-NLLGEDVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLDSDDHV 276 (940)
Q Consensus 202 DsG~YtC~a~-N~~g~~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G-~P~p~ItW~k~g~~l~~~~~~ 276 (940)
|+|.|+|.+. +..+..+..+.|.|.. .+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+......
T Consensus 155 d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 234 (289)
T 3ejj_X 155 DSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNS 234 (289)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEE
T ss_pred cCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCc
Confidence 9999999999 5556666777888874 5677777787788889999999999998 799999999999988754332
Q ss_pred EEe----ecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 277 TYE----HDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 277 ~~~----~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
... ..+..|.|.++..+|+|.|+|.|.|..|....++.|.+.
T Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 235 DFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280 (289)
T ss_dssp EECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC
T ss_pred ccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEE
Confidence 211 123459999999999999999999999999998888775
No 64
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.4e-30 Score=289.05 Aligned_cols=269 Identities=26% Similarity=0.474 Sum_probs=144.8
Q ss_pred cCCceeecCCCcEEEEEEeCCC-CCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeee
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGY 222 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~-P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~ 222 (940)
.+....+.+|+++.|.|.+.+. |.+.++|++++..+....++.. .++.|.|.+++.+|+|.|+|.+.|. +..+..+.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~ 91 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV-GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFS 91 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe-ccceEEEeecccccCEEEEEEEEeC-CeEEEEEE
Confidence 4777889999999999999986 6789999999988876555443 4568999999999999999999998 77777777
Q ss_pred eeecCC---------------------CCeeee----CCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCce-
Q psy11143 223 LTVTGA---------------------PPIFIQ----RPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV- 276 (940)
Q Consensus 223 L~V~~~---------------------~p~~~~----~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~- 276 (940)
|.|... +|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.
T Consensus 92 l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 171 (334)
T 1ry7_B 92 VRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG 171 (334)
T ss_dssp ---------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTT
T ss_pred EEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccccc
Confidence 777642 222221 123467889999999999999999999999999988765432
Q ss_pred --EEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeecc--CCeEEE-cCCceeecCCCeEEEEEeecCcCC
Q psy11143 277 --TYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHR--APRLVV-KPFDMRAPAGSSVEIPCKPDGEPL 351 (940)
Q Consensus 277 --~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~--~P~i~~-~p~~~~v~~G~~vtL~C~v~g~P~ 351 (940)
.......+|.|.++..+|+|.|+|.|.|..|.....+.|.|.... +|.+.. .+....+.+|+.++|.|.+.|.|.
T Consensus 172 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~ 251 (334)
T 1ry7_B 172 GIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQ 251 (334)
T ss_dssp CCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSC
T ss_pred ceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCC
Confidence 222334569999999999999999999999988888888886532 344433 345678899999999999999999
Q ss_pred CeEEEEe----CCeeeccCCc--EEEee----------eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 352 PRISWSK----DEAEFVEDRN--HKIHR----------TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 352 p~i~W~k----~g~~i~~~~~--~~i~~----------~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
|.|.|+| +|..+..+.. ..+.. .++|.|.++..+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 252 p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 252 PHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp EEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred CeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 9999999 6666654332 11111 13799999999999999999999999999999999987653
No 65
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=288.86 Aligned_cols=274 Identities=19% Similarity=0.287 Sum_probs=218.5
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeC-------CCCCCeEEEeeCCeec--ccc-CceEEeeeceEEEeecccCCCceE
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPD-------GEPLPRISWSKDEAEF--VED-RNHKIHRTGSLRLYNIGPQDSGLY 206 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~-------g~P~p~ItW~k~g~~i--~~~-~~~~~~~~~sL~I~~v~~~DsG~Y 206 (940)
..|.+...+....+.+|+++.|.|.+. +.|.+.|.|++++..+ ... .......+++|.|.+++.+|+|.|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 96 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTY 96 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEE
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEE
Confidence 357788888999999999999999998 8899999999998873 332 222334567899999999999999
Q ss_pred EEEEEcCCcceeeeeeeeecCCCCee-eeCCCeeEEecCCeEEEEEE-----EeeeCCCeEEEEECCeecCCC-CceEEe
Q psy11143 207 RCTASNLLGEDVAEGYLTVTGAPPIF-IQRPVSTTYSTGSTSRITCL-----VEGHPLPQMTWFHDGNSLDSD-DHVTYE 279 (940)
Q Consensus 207 tC~a~N~~g~~s~s~~L~V~~~~p~~-~~~p~~~~v~~G~~v~L~C~-----v~G~P~p~ItW~k~g~~l~~~-~~~~~~ 279 (940)
+|.+.|..|.....+.|.|...++.. ........+.+|+.+.|.|. +.|.|.+.+.|+++|..+... .++...
T Consensus 97 ~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~ 176 (339)
T 3o4o_C 97 VCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSV 176 (339)
T ss_dssp ECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEEC
T ss_pred EEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEc
Confidence 99999999988888888888544322 12233457889999999999 788999999999999998765 455555
Q ss_pred ecCeEEEEeeeccCCCeEEEEEEEeCCCC----ceeEEEEEEeec---cCCeEEEcCCceeecCCCeEEEEEee---cCc
Q psy11143 280 HDGFVLVLNGVRESDAGVYNCVAQNSEGS----AESVAMIRINGH---RAPRLVVKPFDMRAPAGSSVEIPCKP---DGE 349 (940)
Q Consensus 280 ~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs----~~~s~~l~V~~~---~~P~i~~~p~~~~v~~G~~vtL~C~v---~g~ 349 (940)
.....|.|.++..+|+|.|+|.|.|..|. ....+.|.|... .+|.+...+....+.+|++++|.|.+ .|.
T Consensus 177 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~ 256 (339)
T 3o4o_C 177 RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGT 256 (339)
T ss_dssp TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSC
T ss_pred CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCC
Confidence 44457999999999999999999999874 345566666543 26777777777788999999999999 899
Q ss_pred C-CCeEEEEeCCeeec---------cCCcEEEeeec------eEEEecCCCCCC-eEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 350 P-LPRISWSKDEAEFV---------EDRNHKIHRTG------SLRLYNIGPQDS-GLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 350 P-~p~i~W~k~g~~i~---------~~~~~~i~~~~------sL~I~~v~~~D~-G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
| .+.+.|++++..+. ...++.+..++ +|.|.++..+|. |.|+|.|.|..|+.+..+.+.+.
T Consensus 257 P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 257 PLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp CSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred CCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 9 88999999987643 22333333344 799999999997 99999999999999888776554
No 66
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=2.2e-30 Score=287.46 Aligned_cols=272 Identities=25% Similarity=0.418 Sum_probs=142.7
Q ss_pred EeCCCcEEEecCCeEEEEEEeecc-CCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEE
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAES 127 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~-P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~ 127 (940)
...|....+.+|+.++|.|.+.+. |.+.|.|+|+|..+....+..+ .+..|.|.+++.+|+|.|+|.+.|. |....
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~ 88 (334)
T 1ry7_B 12 PGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV--GPQRLQVLNASHEDSGAYSCRQRLT-QRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe--ccceEEEeecccccCEEEEEEEEeC-CeEEE
Confidence 334788899999999999999886 6789999999998875544433 3456899999999999999999998 66666
Q ss_pred EEEEEEeccc--------------------CCeeEe----cCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccC
Q psy11143 128 VAMIRINGHR--------------------APRLVV----KPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR 183 (940)
Q Consensus 128 ~~~L~V~~~~--------------------~P~~~~----~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~ 183 (940)
...|.|...+ +|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~ 168 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEH 168 (334)
T ss_dssp ------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTS
T ss_pred EEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccc
Confidence 6666665432 222221 1123578899999999999999999999999998876543
Q ss_pred ceE----EeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCC---Ceeee-CCCeeEEecCCeEEEEEEEee
Q psy11143 184 NHK----IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAP---PIFIQ-RPVSTTYSTGSTSRITCLVEG 255 (940)
Q Consensus 184 ~~~----~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~---p~~~~-~p~~~~v~~G~~v~L~C~v~G 255 (940)
+.. ......|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+ |.+.. .+....+..|+.+.|.|.+.|
T Consensus 169 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g 248 (334)
T 1ry7_B 169 RIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYS 248 (334)
T ss_dssp STTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBC
T ss_pred cccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEec
Confidence 321 1223479999999999999999999999988888888887532 33322 356778999999999999999
Q ss_pred eCCCeEEEEE----CCeecCCCCce--EEeec---------CeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeec
Q psy11143 256 HPLPQMTWFH----DGNSLDSDDHV--TYEHD---------GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGH 320 (940)
Q Consensus 256 ~P~p~ItW~k----~g~~l~~~~~~--~~~~~---------g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~ 320 (940)
.|.|.+.|++ +|..+...... .+... ...|.|.++..+|+|.|+|.|.|..|....++.|.|...
T Consensus 249 ~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 328 (334)
T 1ry7_B 249 DAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPA 328 (334)
T ss_dssp SSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECS
T ss_pred CCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEEC
Confidence 9999999999 77776544321 11111 125999999999999999999999999999999998764
Q ss_pred cCC
Q psy11143 321 RAP 323 (940)
Q Consensus 321 ~~P 323 (940)
.+|
T Consensus 329 ~~~ 331 (334)
T 1ry7_B 329 EEE 331 (334)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 67
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=8.1e-29 Score=275.57 Aligned_cols=260 Identities=16% Similarity=0.189 Sum_probs=198.7
Q ss_pred CcEEEecCCeEEEEEEeecc---------CCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCe-EEEEEEEeCC
Q psy11143 53 VSTTYSTGSTSRITCLVEGH---------PLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAG-VYNCVAQNSE 122 (940)
Q Consensus 53 ~~~~V~eGesv~L~C~v~g~---------P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG-~YtC~a~n~~ 122 (940)
..+.+.+|+++.|.|.+.+. |.+.|+|+|++..+....+. ..+..|.|.+++.+|+| .|+|.|.|..
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~---~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~ 113 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR---VKNGDLWIANYTSNDSHRRYLCTVTTKN 113 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT---EETTEEEESSCCGGGGGCCEEEEEECTT
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce---eecceEEEcCCChHhCCCcEEEEEEeCC
Confidence 45678999999999999874 55799999999876543332 23456799999999999 9999999998
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCC-CCeEEEeeCCeeccccCceEEeeeceEEEeecccC
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEP-LPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQ 201 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P-~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~ 201 (940)
|.......+.+... +|.+...+....+.+|+.+.|.|.+.|.| .+.++|++++..+..........++.|.|.+++.+
T Consensus 114 g~~~~~~~~~v~~~-~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~ 192 (329)
T 3oq3_B 114 GDCVQGIVRSHIRK-PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELE 192 (329)
T ss_dssp SCEEEEEEEEEECC-CCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGG
T ss_pred CceeeEEEEEEEcC-CCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChh
Confidence 87555443333332 34444443344577899999999999999 89999999999886433333333678999999999
Q ss_pred CCceEEEEEEcC--Ccceee----eeeeeecCCCC---eeeeCCCeeEEecCCeEEEEEEEeeeC---CC-eEEEEECCe
Q psy11143 202 DSGLYRCTASNL--LGEDVA----EGYLTVTGAPP---IFIQRPVSTTYSTGSTSRITCLVEGHP---LP-QMTWFHDGN 268 (940)
Q Consensus 202 DsG~YtC~a~N~--~g~~s~----s~~L~V~~~~p---~~~~~p~~~~v~~G~~v~L~C~v~G~P---~p-~ItW~k~g~ 268 (940)
|+|.|+|.|.|. .|.... .+.|.|...+. ... .+....+.+|+.++|.|.+.|.| .| .+.|+++|.
T Consensus 193 D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~ 271 (329)
T 3oq3_B 193 DSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSG 271 (329)
T ss_dssp GCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTS
T ss_pred hCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCe
Confidence 999999999987 554433 36677774441 222 67778899999999999999998 77 899999998
Q ss_pred ec-CCCCceEEe--e----cCeEEEEeeeccCCCe-EEEEEEEeCCCCceeEEEEEE
Q psy11143 269 SL-DSDDHVTYE--H----DGFVLVLNGVRESDAG-VYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 269 ~l-~~~~~~~~~--~----~g~sL~I~~v~~~DsG-~YtC~A~N~~Gs~~~s~~l~V 317 (940)
.+ ..+...... . ...+|.|.++..+|+| .|+|.|.|..|....++.|.|
T Consensus 272 ~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 272 WIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred eeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 84 433332221 1 2345999999999999 999999999999988877766
No 68
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=2.4e-29 Score=281.17 Aligned_cols=266 Identities=19% Similarity=0.252 Sum_probs=175.6
Q ss_pred CCceeecCCCcEEEEEEeCCCCC-----------CeEEEeeCCee------cc--ccCceEEeeeceEEEeecccCCCce
Q psy11143 145 PFDMRAPAGSSVEIPCKPDGEPL-----------PRISWSKDEAE------FV--EDRNHKIHRTGSLRLYNIGPQDSGL 205 (940)
Q Consensus 145 p~~~~v~~Ge~vtL~C~v~g~P~-----------p~ItW~k~g~~------i~--~~~~~~~~~~~sL~I~~v~~~DsG~ 205 (940)
...+.+.+|+++.|.|.+.+.|. +.++|++++.. +. .........++.|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 45677899999999999998765 89999997742 11 1122223446689999999999999
Q ss_pred EEEEEEcCCcceeeeeeeeecCCCCeee---eCCCeeEEecCCeEEEEEEE-----eeeCCCeEEEEECCeecCCCCceE
Q psy11143 206 YRCTASNLLGEDVAEGYLTVTGAPPIFI---QRPVSTTYSTGSTSRITCLV-----EGHPLPQMTWFHDGNSLDSDDHVT 277 (940)
Q Consensus 206 YtC~a~N~~g~~s~s~~L~V~~~~p~~~---~~p~~~~v~~G~~v~L~C~v-----~G~P~p~ItW~k~g~~l~~~~~~~ 277 (940)
|+|.|.|..+.....+.|.|...++... ..+....+.+|+.+.|.|.+ .|.|.+.++|+|++..+.... .
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~--~ 171 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN--N 171 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS--S
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc--c
Confidence 9999999998888888888885433222 22445678899999999985 778999999999999986543 3
Q ss_pred EeecCeEEEEeeeccCCCeEEEEEEEeCC-CCc---eeEEEEEEeecc----CCeEEEcCCce--eecCCCeEEEEEeec
Q psy11143 278 YEHDGFVLVLNGVRESDAGVYNCVAQNSE-GSA---ESVAMIRINGHR----APRLVVKPFDM--RAPAGSSVEIPCKPD 347 (940)
Q Consensus 278 ~~~~g~sL~I~~v~~~DsG~YtC~A~N~~-Gs~---~~s~~l~V~~~~----~P~i~~~p~~~--~v~~G~~vtL~C~v~ 347 (940)
+..++..|.|.++..+|+|.|+|.|.|.. |.. .....|.|.... +|.+...+... .+.+|++++|.|.+.
T Consensus 172 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~ 251 (349)
T 4dep_C 172 VIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVY 251 (349)
T ss_dssp EEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEE
T ss_pred eeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEE
Confidence 44455679999999999999999999987 443 344445554321 56665554432 788999999999999
Q ss_pred ----CcCCCeEEEEeCCeeecc-CCcEEE------------eeeceEEEecCCCCCC-eEEEEEEEeCCeeEEEEEEEEE
Q psy11143 348 ----GEPLPRISWSKDEAEFVE-DRNHKI------------HRTGSLRLYNIGPQDS-GLYRCTASNLLGEDVAEGYLTV 409 (940)
Q Consensus 348 ----g~P~p~i~W~k~g~~i~~-~~~~~i------------~~~~sL~I~~v~~~D~-G~YtC~A~N~~G~~~~s~~L~V 409 (940)
|.|.|.|.|+++|..+.. ..++.+ ...++|.|.++..+|. |.|+|.|.|..|....++.|.|
T Consensus 252 ~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 331 (349)
T 4dep_C 252 FSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQ 331 (349)
T ss_dssp ECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC---
T ss_pred EccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEee
Confidence 679999999999987765 222221 1234699999999999 9999999999999999999998
Q ss_pred ecC
Q psy11143 410 TGE 412 (940)
Q Consensus 410 ~~~ 412 (940)
+.+
T Consensus 332 ~~~ 334 (349)
T 4dep_C 332 KVP 334 (349)
T ss_dssp ---
T ss_pred ecC
Confidence 753
No 69
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=1.9e-29 Score=277.61 Aligned_cols=266 Identities=20% Similarity=0.327 Sum_probs=205.0
Q ss_pred CCcEEEecCCeEEEEEEeeccC-CCeEEEEECCEeecC--CCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHP-LPQMTWFHDGNSLDS--DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESV 128 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P-~p~V~W~kdg~~I~~--~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~ 128 (940)
...+.+.+|+.+.|.|.+.+.| .+.|.|+|+|..+.. ....++...+..|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 3467899999999999999877 789999999875432 2222333334467999999999999999999998877766
Q ss_pred EEEEEecccCCeeEecC---CceeecCCCcEEEEEEe------CCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecc
Q psy11143 129 AMIRINGHRAPRLVVKP---FDMRAPAGSSVEIPCKP------DGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 199 (940)
Q Consensus 129 ~~L~V~~~~~P~~~~~p---~~~~v~~Ge~vtL~C~v------~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~ 199 (940)
..+.+... +|.+...+ ....+.+|+++.|.|.+ .|.|.+.++|++++..+..........++.|.|.+++
T Consensus 92 ~~v~v~~~-~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~ 170 (315)
T 1itb_B 92 ISAKFVEN-EPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVA 170 (315)
T ss_dssp CCCEEECC-CTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCC
T ss_pred EEEEEeCC-CCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEece
Confidence 66665432 23332222 23568899999999998 8899999999999998865444445566789999999
Q ss_pred cCCCceEEEEEE-cCCcce---eeeeeeeec----CCCCeeeeCCCe-eEEecCCeEEEEEEEeeeCCCeEEEEECCeec
Q psy11143 200 PQDSGLYRCTAS-NLLGED---VAEGYLTVT----GAPPIFIQRPVS-TTYSTGSTSRITCLVEGHPLPQMTWFHDGNSL 270 (940)
Q Consensus 200 ~~DsG~YtC~a~-N~~g~~---s~s~~L~V~----~~~p~~~~~p~~-~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l 270 (940)
.+|+|.|+|.|. |..|.. ...+.+.+. ..+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|..+
T Consensus 171 ~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i 250 (315)
T 1itb_B 171 EKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 250 (315)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEEC
T ss_pred ehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEEC
Confidence 999999999999 777765 334444343 255666655543 57889999999999999999999999999999
Q ss_pred CCCCceEEe------e--------cCeEEEEeeeccCC-CeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 271 DSDDHVTYE------H--------DGFVLVLNGVRESD-AGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 271 ~~~~~~~~~------~--------~g~sL~I~~v~~~D-sG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
......... . ....|.|.++..+| +|.|+|.|.|..|....++.|.|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 865432211 1 12369999999999 999999999999999988887774
No 70
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=3.3e-29 Score=290.34 Aligned_cols=302 Identities=17% Similarity=0.220 Sum_probs=204.7
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCce---EEEEEEEEEeC----CCeEEeCCCcEEEecCCeEEEEEEeecc-CCC-e
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGV---YRGDLHVTVNA----PPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP-Q 76 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~---~~~~v~l~V~~----pP~~~~~p~~~~V~eGesv~L~C~v~g~-P~p-~ 76 (940)
+..+|+|.+++.+|+|.|+|.+.|..+. ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .
T Consensus 77 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 156 (444)
T 1igt_B 77 NTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 156 (444)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCE
T ss_pred CeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcE
Confidence 4579999999999999999999987654 22235666663 4555433333335899999999999884 776 9
Q ss_pred EEEEECCEeecC--CCCe----EEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEe----------------
Q psy11143 77 MTWFHDGNSLDS--DDHV----TYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN---------------- 134 (940)
Q Consensus 77 V~W~kdg~~I~~--~~~~----~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~---------------- 134 (940)
|+|+|++..+.. .... .+. ....|.|.++..+| |.|+|.|.|..+.......+.+.
T Consensus 157 v~W~~~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (444)
T 1igt_B 157 LTWNSGSLSSGVHTFPAVLQSDLYT-LSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPN 234 (444)
T ss_dssp EEEGGGTBCTTEEECCCEEETTEEE-EEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSC
T ss_pred EEEecCCCCCCeEecCccccCCcEE-EEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcc
Confidence 999999876321 1111 111 12357999999999 99999999999986655555431
Q ss_pred cccCCeeEecCCc-ee-ecCCCcEEEEEEeCCCC----CCeEEEeeCCeeccccCce--E------EeeeceEEEeeccc
Q psy11143 135 GHRAPRLVVKPFD-MR-APAGSSVEIPCKPDGEP----LPRISWSKDEAEFVEDRNH--K------IHRTGSLRLYNIGP 200 (940)
Q Consensus 135 ~~~~P~~~~~p~~-~~-v~~Ge~vtL~C~v~g~P----~p~ItW~k~g~~i~~~~~~--~------~~~~~sL~I~~v~~ 200 (940)
....|.+...+.. .. +.+|++++|.|.+.|.+ .+.|+|++++..+...... . ....+.|.|.+++.
T Consensus 235 ~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 314 (444)
T 1igt_B 235 LLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDW 314 (444)
T ss_dssp CCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHH
T ss_pred cCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHh
Confidence 1113554333333 33 58999999999999873 3699999999877532211 1 12345799999999
Q ss_pred CCCceEEEEEEcCCcceeeeeeeee---cCCCCeeeeCCCeeEEecCCeEEEEEEEee-eCCC-eEEEEECCeecCCCCc
Q psy11143 201 QDSGLYRCTASNLLGEDVAEGYLTV---TGAPPIFIQRPVSTTYSTGSTSRITCLVEG-HPLP-QMTWFHDGNSLDSDDH 275 (940)
Q Consensus 201 ~DsG~YtC~a~N~~g~~s~s~~L~V---~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G-~P~p-~ItW~k~g~~l~~~~~ 275 (940)
+|+|.|+|.|.|..+.......+.+ ...+|.+...+.......+..++|.|.+.| +|.+ .|+|+|+|..+.....
T Consensus 315 ~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 394 (444)
T 1igt_B 315 MSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKN 394 (444)
T ss_dssp HTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEE
T ss_pred ccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEcccccc
Confidence 9999999999998886633333322 124555544333222223445999999999 5665 9999999998843211
Q ss_pred e--EEeecCe-----EEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 276 V--TYEHDGF-----VLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 276 ~--~~~~~g~-----sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
. ....++. .|.|.....+|.|.|+|.|.|.....
T Consensus 395 ~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~~ 435 (444)
T 1igt_B 395 TEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLHN 435 (444)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSGG
T ss_pred ccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcCC
Confidence 1 1123332 25666666778999999999986543
No 71
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=4.9e-28 Score=258.14 Aligned_cols=240 Identities=17% Similarity=0.247 Sum_probs=194.4
Q ss_pred CeeEecCCceeecCCCcEEEEEEeCCCCCC-eEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
|.+...|....+.+|+.+.|.|.+.+.|.+ .++|++++..+... ...|.|.+++.+|+|.|+|.+.|..+.
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-------~~~l~i~~~~~~d~G~Y~C~~~~~~~s- 73 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------TPSYRITSASVNDSGEYRCQRGLSGRS- 73 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEESSSCCC-
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-------CCeEEEecCCcccCeEEEEEEecCCcc-
Confidence 667888888899999999999999998888 99999999887543 457999999999999999999886554
Q ss_pred eeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEE-eeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCe
Q psy11143 218 VAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLV-EGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAG 296 (940)
Q Consensus 218 s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v-~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG 296 (940)
..+.|.|.. ++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..+..|.|.++..+|+|
T Consensus 74 -~~~~l~v~~-~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~------~~~~~l~i~~~~~~d~G 144 (262)
T 3rjd_A 74 -DPIQLEIHR-GW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF------HWNSNLTILKTNISHNG 144 (262)
T ss_dssp -CCEEEEEEC-SS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE------EECCCEEESSCCGGGCE
T ss_pred -ccEEEEEec-cc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc------CCCCeEEEEECChhhCE
Confidence 345566663 33 3334455678899999999999 67888899999999887422 22345999999999999
Q ss_pred EEEEEEEeCCCCceeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCC-C----eEEEEeCCeeeccCCcEE
Q psy11143 297 VYNCVAQNSEGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL-P----RISWSKDEAEFVEDRNHK 370 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~-p----~i~W~k~g~~i~~~~~~~ 370 (940)
.|+|.|.|..+.....+.|.|... .+|.+...+ ...+.+|+.++|.|.+.+.|. | .+.|++++..+...
T Consensus 145 ~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~---- 219 (262)
T 3rjd_A 145 TYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR---- 219 (262)
T ss_dssp EEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE----
T ss_pred EEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc----
Confidence 999999999987777778888764 355555554 567889999999999999986 5 47899999876422
Q ss_pred EeeeceEEEecCCCCCCeEEEEEEEeCCeeE
Q psy11143 371 IHRTGSLRLYNIGPQDSGLYRCTASNLLGED 401 (940)
Q Consensus 371 i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~ 401 (940)
...+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 220 -~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 220 -NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred -CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 245689999999999999999999999965
No 72
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=4.7e-30 Score=285.70 Aligned_cols=276 Identities=17% Similarity=0.257 Sum_probs=216.0
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEee-------ccCCCeEEEEECCEe--ecCCCCeEEEeeceEEEEcccccCCCe
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVE-------GHPLPQMTWFHDGNS--LDSDDHVTYEHDGFVLVLNGVRESDAG 112 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~-------g~P~p~V~W~kdg~~--I~~~~~~~~~~~gs~L~I~~v~~~DsG 112 (940)
....|.+...|....+.+|+.+.|.|.+. +.|.+.|.|+|++.. +......++...+..|.|.+++.+|+|
T Consensus 15 ~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 94 (339)
T 3o4o_C 15 ARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSG 94 (339)
T ss_dssp ---CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCE
T ss_pred chhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCE
Confidence 34568888999999999999999999998 889999999999987 443334455445556899999999999
Q ss_pred EEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEE-----eCCCCCCeEEEeeCCeecccc-CceE
Q psy11143 113 VYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCK-----PDGEPLPRISWSKDEAEFVED-RNHK 186 (940)
Q Consensus 113 ~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~-----v~g~P~p~ItW~k~g~~i~~~-~~~~ 186 (940)
.|+|.+.|..|.....+.|.|...+.+..........+.+|+.+.|.|. +.+.|.+.+.|++++..+... .++.
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~ 174 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFL 174 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEE
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeE
Confidence 9999999998877778888887644322122233457889999999999 788999999999999888655 3343
Q ss_pred Eeee-ceEEEeecccCCCceEEEEEEcCCcc----eeeeeeeeecCC----CCeeeeCCCeeEEecCCeEEEEEEE---e
Q psy11143 187 IHRT-GSLRLYNIGPQDSGLYRCTASNLLGE----DVAEGYLTVTGA----PPIFIQRPVSTTYSTGSTSRITCLV---E 254 (940)
Q Consensus 187 ~~~~-~sL~I~~v~~~DsG~YtC~a~N~~g~----~s~s~~L~V~~~----~p~~~~~p~~~~v~~G~~v~L~C~v---~ 254 (940)
.... +.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|... +|.+...+....+..|+.+.|.|.+ .
T Consensus 175 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~ 254 (339)
T 3o4o_C 175 SVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGT 254 (339)
T ss_dssp ECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESS
T ss_pred EcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCC
Confidence 3332 47999999999999999999998773 456677777642 4566666677788999999999999 8
Q ss_pred eeC-CCeEEEEECCeecCCC---------CceEEeecCe-----EEEEeeeccCCC-eEEEEEEEeCCCCceeEEEEEE
Q psy11143 255 GHP-LPQMTWFHDGNSLDSD---------DHVTYEHDGF-----VLVLNGVRESDA-GVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 255 G~P-~p~ItW~k~g~~l~~~---------~~~~~~~~g~-----sL~I~~v~~~Ds-G~YtC~A~N~~Gs~~~s~~l~V 317 (940)
|.| .+.+.|++++..+... .+..+..++. +|.|.++..+|. |.|+|.|.|..|..+..+.+.+
T Consensus 255 g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 255 GTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp SCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred CCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 999 8899999999876422 2222333332 499999999997 9999999999999888766554
No 73
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=9.5e-29 Score=276.31 Aligned_cols=267 Identities=18% Similarity=0.247 Sum_probs=174.5
Q ss_pred CCcEEEecCCeEEEEEEeeccCC-----------CeEEEEECCEe------ec-CCCCeEEEeeceEEEEcccccCCCeE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHPL-----------PQMTWFHDGNS------LD-SDDHVTYEHDGFVLVLNGVRESDAGV 113 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P~-----------p~V~W~kdg~~------I~-~~~~~~~~~~gs~L~I~~v~~~DsG~ 113 (940)
...+.+.+|+.+.|.|.+.+.|. +.|.|+|++.. +. .....++...+..|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 45678999999999999987654 89999998842 21 01233444455678999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEecccCC--eeEecCCceeecCCCcEEEEEEe-----CCCCCCeEEEeeCCeeccccCceE
Q psy11143 114 YNCVAQNSEGSAESVAMIRINGHRAP--RLVVKPFDMRAPAGSSVEIPCKP-----DGEPLPRISWSKDEAEFVEDRNHK 186 (940)
Q Consensus 114 YtC~a~n~~g~~~~~~~L~V~~~~~P--~~~~~p~~~~v~~Ge~vtL~C~v-----~g~P~p~ItW~k~g~~i~~~~~~~ 186 (940)
|+|.|.|..+.....+.|.|...+.. .....+....+.+|+.+.|.|.+ .+.|.+.++|++++..+....+.
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~- 172 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNV- 172 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSE-
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccce-
Confidence 99999999888887888888764321 11123445678899999999985 77899999999999988554332
Q ss_pred EeeeceEEEeecccCCCceEEEEEEcCC-cce---eeeeeeeecCC-----CCeeeeCCCee--EEecCCeEEEEEEEe-
Q psy11143 187 IHRTGSLRLYNIGPQDSGLYRCTASNLL-GED---VAEGYLTVTGA-----PPIFIQRPVST--TYSTGSTSRITCLVE- 254 (940)
Q Consensus 187 ~~~~~sL~I~~v~~~DsG~YtC~a~N~~-g~~---s~s~~L~V~~~-----~p~~~~~p~~~--~v~~G~~v~L~C~v~- 254 (940)
......|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|... +|.+...+... .+..|+.++|.|.+.
T Consensus 173 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~ 252 (349)
T 4dep_C 173 IPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYF 252 (349)
T ss_dssp EEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEE
T ss_pred eecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEE
Confidence 2334579999999999999999999986 443 56666777643 45555444332 788999999999998
Q ss_pred ---eeCCCeEEEEECCeecCC-CCceEEee-----------cCeEEEEeeeccCCC-eEEEEEEEeCCCCceeEEEEEEe
Q psy11143 255 ---GHPLPQMTWFHDGNSLDS-DDHVTYEH-----------DGFVLVLNGVRESDA-GVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 255 ---G~P~p~ItW~k~g~~l~~-~~~~~~~~-----------~g~sL~I~~v~~~Ds-G~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
|.|.|.+.|+++|..+.. ..++.+.. ...+|.|.++..+|+ |.|+|.|.|..|....++.|.|.
T Consensus 253 ~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 253 SFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp CCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC----
T ss_pred ccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 568899999999988865 22222210 122399999999999 99999999999999888888875
Q ss_pred e
Q psy11143 319 G 319 (940)
Q Consensus 319 ~ 319 (940)
.
T Consensus 333 ~ 333 (349)
T 4dep_C 333 V 333 (349)
T ss_dssp -
T ss_pred c
Confidence 4
No 74
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=253.62 Aligned_cols=241 Identities=16% Similarity=0.285 Sum_probs=195.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCC-eEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCC
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLP-QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 123 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p-~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g 123 (940)
+|.+...|....+.+|+.++|.|.+.+.|.+ .|+|+|+|..+... +..|.|.+++.+|+|.|+|.+.|..+
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~--------~~~l~i~~~~~~d~G~Y~C~~~~~~~ 72 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS--------TPSYRITSASVNDSGEYRCQRGLSGR 72 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC--------SSEEEESSCCGGGCEEEEEEESSSCC
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc--------CCeEEEecCCcccCeEEEEEEecCCc
Confidence 4788889999999999999999999998887 99999999988643 34579999999999999999988665
Q ss_pred ceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCC
Q psy11143 124 SAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQD 202 (940)
Q Consensus 124 ~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~D 202 (940)
.. .+.|.|.. . .+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.+++.+|
T Consensus 73 s~--~~~l~v~~--~-~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~~~~l~i~~~~~~d 142 (262)
T 3rjd_A 73 SD--PIQLEIHR--G-WLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HWNSNLTILKTNISH 142 (262)
T ss_dssp CC--CEEEEEEC--S-SEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EECCCEEESSCCGGG
T ss_pred cc--cEEEEEec--c-ceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----CCCCeEEEEECChhh
Confidence 44 34455543 2 34455566778899999999999 67888899999999877432 235689999999999
Q ss_pred CceEEEEEEcCCcceeeeeeeeecCC--CCeeeeCCCeeEEecCCeEEEEEEEeeeCC-C----eEEEEECCeecCCCCc
Q psy11143 203 SGLYRCTASNLLGEDVAEGYLTVTGA--PPIFIQRPVSTTYSTGSTSRITCLVEGHPL-P----QMTWFHDGNSLDSDDH 275 (940)
Q Consensus 203 sG~YtC~a~N~~g~~s~s~~L~V~~~--~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~-p----~ItW~k~g~~l~~~~~ 275 (940)
+|.|+|.+.|..+..+..+.|.|... +|.+...+ ...+.+|+.+.|.|.+.+.|. | .+.|++++..+...
T Consensus 143 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~-- 219 (262)
T 3rjd_A 143 NGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR-- 219 (262)
T ss_dssp CEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE--
T ss_pred CEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc--
Confidence 99999999999988888888888753 45555544 567889999999999999876 5 37899999877522
Q ss_pred eEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 276 VTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 276 ~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
..+..|.|.++..+|+|.|+|.|.|..|...
T Consensus 220 ----~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~ 250 (262)
T 3rjd_A 220 ----NTSSEYQILTARREDSGLYWCEAATEDGNVL 250 (262)
T ss_dssp ----ESCCEEEESSCCGGGCEEEEEEEEETTSSCE
T ss_pred ----CCCceEEEEEechhhCeEEEEEEEcccCceE
Confidence 2344699999999999999999999999763
No 75
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=1.5e-26 Score=273.87 Aligned_cols=356 Identities=18% Similarity=0.240 Sum_probs=227.6
Q ss_pred eCCCcEEEecCCeEEEEEEeeccCC----CeEEEEEC--CEe---ec-------------CCCCeEEEee----ceEEEE
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHPL----PQMTWFHD--GNS---LD-------------SDDHVTYEHD----GFVLVL 103 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P~----p~V~W~kd--g~~---I~-------------~~~~~~~~~~----gs~L~I 103 (940)
.+|..+.+.+|++++|.|.+.+.+. ..|.|||. |.. +. ...++.+..+ ...|.|
T Consensus 5 ~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 84 (512)
T 1zvo_C 5 QESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNL 84 (512)
T ss_pred ECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEE
Confidence 3466788999999999999987543 68999985 221 10 0123333321 256899
Q ss_pred cccccCCCeEEEEEEEeCCC----------c---eEEEEEEEEecc--cCCeeEe-cCCceeecCCCcEEEEEEeCCC-C
Q psy11143 104 NGVRESDAGVYNCVAQNSEG----------S---AESVAMIRINGH--RAPRLVV-KPFDMRAPAGSSVEIPCKPDGE-P 166 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g----------~---~~~~~~L~V~~~--~~P~~~~-~p~~~~v~~Ge~vtL~C~v~g~-P 166 (940)
.+++.+|+|.|.|.+.+..+ . ....+.|.|... ..|.+.. .+.......|+.++|.|.+.+. |
T Consensus 85 ~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 85 RSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred CcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeec
Confidence 99999999999999988642 1 112345666532 2344432 2221112357899999999986 7
Q ss_pred CC-eEEEeeCCeecc--ccC-----ceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeee-----------eeeecC
Q psy11143 167 LP-RISWSKDEAEFV--EDR-----NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG-----------YLTVTG 227 (940)
Q Consensus 167 ~p-~ItW~k~g~~i~--~~~-----~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~-----------~L~V~~ 227 (940)
.+ .|+|++++.... ... ...+...+.|.|.....+ .|.|+|.|.|..+...... .+.+..
T Consensus 165 ~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~ 243 (512)
T 1zvo_C 165 TSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTA 243 (512)
T ss_pred CceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeC
Confidence 65 899999654321 000 011122345888888777 9999999999887654433 122220
Q ss_pred ---------------------------------------------------CCCee-eeCCCeeEEecCCeEEEEEEEee
Q psy11143 228 ---------------------------------------------------APPIF-IQRPVSTTYSTGSTSRITCLVEG 255 (940)
Q Consensus 228 ---------------------------------------------------~~p~~-~~~p~~~~v~~G~~v~L~C~v~G 255 (940)
.+|.+ ...+....+..|+.++|.|.+.|
T Consensus 244 pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g 323 (512)
T 1zvo_C 244 QPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVG 323 (512)
T ss_pred CCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEec
Confidence 12222 22333344667999999999998
Q ss_pred eCC--CeEEEEECCeecCCCC---ceEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe-e---cc
Q psy11143 256 HPL--PQMTWFHDGNSLDSDD---HVTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN-G---HR 321 (940)
Q Consensus 256 ~P~--p~ItW~k~g~~l~~~~---~~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~-~---~~ 321 (940)
.++ ..|+|+++|..+.... ......++ +.|.|..+..+|.|.|+|.|.|..+... ...+... . ..
T Consensus 324 ~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~ 402 (512)
T 1zvo_C 324 SDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPV 402 (512)
T ss_pred eECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCC
Confidence 633 3999999998865211 11111222 2488988889999999999999987654 3333221 1 24
Q ss_pred CCeEEEcCCceeecCCCeEE-EEEeecCcCCC--eEEEEeCCeeeccCCcE----EEeee-------ceEEEecCCCCCC
Q psy11143 322 APRLVVKPFDMRAPAGSSVE-IPCKPDGEPLP--RISWSKDEAEFVEDRNH----KIHRT-------GSLRLYNIGPQDS 387 (940)
Q Consensus 322 ~P~i~~~p~~~~v~~G~~vt-L~C~v~g~P~p--~i~W~k~g~~i~~~~~~----~i~~~-------~sL~I~~v~~~D~ 387 (940)
+|.+...+... .|+.++ |.|.+.|.+++ .|.|+|+|..+...... ....+ +.|.|.....+|.
T Consensus 403 ~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~ 479 (512)
T 1zvo_C 403 KLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQP 479 (512)
T ss_pred CCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCC
Confidence 67665544332 789999 99999986544 78999999987654211 11222 2466666666779
Q ss_pred eEEEEEEEeCCeeEE--EEEEEEEe
Q psy11143 388 GLYRCTASNLLGEDV--AEGYLTVT 410 (940)
Q Consensus 388 G~YtC~A~N~~G~~~--~s~~L~V~ 410 (940)
|.|+|.|.|...... ....|.|.
T Consensus 480 g~YtC~v~h~~l~~~~~~~~~~~v~ 504 (512)
T 1zvo_C 480 ATYTCVVSHEDSRTLLNASRSLEVS 504 (512)
T ss_pred CeEEEEEEecCCCCceEEEEEEEec
Confidence 999999999866533 34444443
No 76
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=1.2e-27 Score=263.59 Aligned_cols=265 Identities=18% Similarity=0.273 Sum_probs=197.6
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCC-----eEEEEECCEee-------------cCCCCeEEEe-------eceEEE
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLP-----QMTWFHDGNSL-------------DSDDHVTYEH-------DGFVLV 102 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p-----~V~W~kdg~~I-------------~~~~~~~~~~-------~gs~L~ 102 (940)
++..|..+.+..|++++|.|.+.+.+.+ .|+|+|++... ....+.++.. ....|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4556778888999999999999887655 49999987532 2222333321 123489
Q ss_pred EcccccCCCeEEEEEEEeC-CCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeecc
Q psy11143 103 LNGVRESDAGVYNCVAQNS-EGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFV 180 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~-~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~ 180 (940)
|.+++.+|+|.|+|.+.+. .+.....+.|. ....|.+...+....+..|+.+.+.|.+. +.|.+.++|++++..+.
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~--v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~ 160 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLR--VLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 160 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEEC--CBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeee--eccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccc
Confidence 9999999999999998654 33333344444 44466777767777788899999999876 68999999999887765
Q ss_pred ccCceE------EeeeceEEEeecccCCCceEEEEEEcCCccee--eeeeeeecCCCCeeee-CCCeeEEecCCeEEEEE
Q psy11143 181 EDRNHK------IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV--AEGYLTVTGAPPIFIQ-RPVSTTYSTGSTSRITC 251 (940)
Q Consensus 181 ~~~~~~------~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s--~s~~L~V~~~~p~~~~-~p~~~~v~~G~~v~L~C 251 (940)
...... ....+.|.|.++..+|+|.|+|.|.|..+... ..+.|.|. .+|.+.. ......+..|+.++|.|
T Consensus 161 ~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~v~~~~~~~~~~~~g~~v~l~C 239 (313)
T 4fqp_A 161 NTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY-YPPEVSISGYDNNWYLGQNEATLTC 239 (313)
T ss_dssp EEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC-EEEEEEEECCCSCEETTCCCEEEEE
T ss_pred ccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc-cCCccccccccceeecCCCeEEEEE
Confidence 432221 12233588999999999999999999876644 44455555 4555543 34455667789999999
Q ss_pred EEeeeCCC-eEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 252 LVEGHPLP-QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 252 ~v~G~P~p-~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
.+.|+|.| .|+|+|+|..+.... . ..+.+|.|.++..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 240 ~~~g~P~p~~v~W~~~~~~l~~~~---~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 304 (313)
T 4fqp_A 240 DARSNPEPTGYNWSTTMGPLPPFA---V-AQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKE 304 (313)
T ss_dssp EEEEESCCCEEEEEETTBSCCTTE---E-EETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EecCCCCCcEEEEEECCEECCCce---E-EeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999 699999999886542 1 2345699999999999999999999999998888888864
No 77
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=3e-28 Score=264.48 Aligned_cols=265 Identities=16% Similarity=0.276 Sum_probs=206.8
Q ss_pred CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe---eeceEEEeecccCCCceEEEEEEcCC
Q psy11143 138 APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH---RTGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 138 ~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~---~~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
+|.+...+....+.+|++++|.|.+.+. +.|++++... .... ..+.|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 74 (292)
T 4dkd_C 4 IPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPH-----WTLYSDGSSSILSTNNATFQNTGTYRCTEPGDP 74 (292)
T ss_dssp CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSS-----CEECCBTTEEEEEESSCCGGGCSCEEECCCC--
T ss_pred CceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCc-----eEEeccCceEEEEEcccccccCEEEEEEEccCC
Confidence 5777788888899999999999999874 8999755421 1121 23489999999999999999999988
Q ss_pred cceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCC--CeEEEEEC-CeecCCCCceEEeecCeEEEEeeec
Q psy11143 215 GEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPL--PQMTWFHD-GNSLDSDDHVTYEHDGFVLVLNGVR 291 (940)
Q Consensus 215 g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~--p~ItW~k~-g~~l~~~~~~~~~~~g~sL~I~~v~ 291 (940)
+..+..+.|.|...+..+...+....+.+|+.+.|.|.+.+ |. +.++|+++ +..+....++....++. |.|.++.
T Consensus 75 ~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~-L~i~~~~ 152 (292)
T 4dkd_C 75 LGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHG-FTIHRAK 152 (292)
T ss_dssp --CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSC-CEETTCC
T ss_pred CCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCce-EEECCCC
Confidence 88888889999865555566778889999999999999998 44 78999998 66666665665555555 9999999
Q ss_pred cCCCeEEEEEEEeCCCCcee-EEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCcCCC-eEEEEeCCeeeccCC
Q psy11143 292 ESDAGVYNCVAQNSEGSAES-VAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDR 367 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~~~-s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p-~i~W~k~g~~i~~~~ 367 (940)
.+|+|.|+|.|.|..+.... .+.|.|.. ..+|.+...+....+.+|+.++|.|.+.+.|.+ .+.|++++..+....
T Consensus 153 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~ 232 (292)
T 4dkd_C 153 FIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQ 232 (292)
T ss_dssp GGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCB
T ss_pred HHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCc
Confidence 99999999999998775533 56666653 138888888888778899999999999987764 789999887654332
Q ss_pred cEEE-----eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 368 NHKI-----HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 368 ~~~i-----~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
.... ...++|.|.++..+|+|.|+|.|.|..|..+.++.|.|....
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 233 QSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred cceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 2211 234589999999999999999999999999999999998764
No 78
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.96 E-value=2.3e-28 Score=284.52 Aligned_cols=303 Identities=17% Similarity=0.285 Sum_probs=199.3
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCc------------eEEEEEEEEEeC----CCeEEeCCCcEEEecCCeEEEEEEe
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAG------------VYRGDLHVTVNA----PPIFIQRPVSTTYSTGSTSRITCLV 69 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g------------~~~~~v~l~V~~----pP~~~~~p~~~~V~eGesv~L~C~v 69 (940)
+..+|+|.+++.+|+|.|+|.+.|..| .......|.|.. +|.+...+....+.+|+.++|.|.+
T Consensus 77 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 156 (457)
T 1hzh_H 77 NTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 156 (457)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEE
T ss_pred CEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEE
Confidence 456899999999999999999998765 222334566654 5665555444457899999999999
Q ss_pred ecc-CC-CeEEEEECCEeecCCCCeEE-Eeec-----eEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecc-----
Q psy11143 70 EGH-PL-PQMTWFHDGNSLDSDDHVTY-EHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGH----- 136 (940)
Q Consensus 70 ~g~-P~-p~V~W~kdg~~I~~~~~~~~-~~~g-----s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~----- 136 (940)
.|. |. +.|.|+|++..+........ ..++ ..|.|.++..+| |.|+|.|.|..+.......+.+...
T Consensus 157 ~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~ 235 (457)
T 1hzh_H 157 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHT 235 (457)
T ss_dssp ESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCS
T ss_pred eEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccc
Confidence 986 64 79999999965421100011 1111 357999999999 9999999998877655544443321
Q ss_pred ----------cCCee-EecCCcee-ecCCCcEEEEEEeCCCCCC----eEEEeeCCeeccccCce--EEeeeceEEEee-
Q psy11143 137 ----------RAPRL-VVKPFDMR-APAGSSVEIPCKPDGEPLP----RISWSKDEAEFVEDRNH--KIHRTGSLRLYN- 197 (940)
Q Consensus 137 ----------~~P~~-~~~p~~~~-v~~Ge~vtL~C~v~g~P~p----~ItW~k~g~~i~~~~~~--~~~~~~sL~I~~- 197 (940)
..|.+ ...+.... +.+|++++|.|.+.|.|++ .|+|++++..+...... ....++.+.+..
T Consensus 236 ~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~ 315 (457)
T 1hzh_H 236 CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSV 315 (457)
T ss_dssp CCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEE
Confidence 13444 33333332 6789999999999987543 99999999877532211 112233444443
Q ss_pred --cccCC---CceEEEEEEcCCcceeeeeeeee---cCCCCeeeeCCCe-eEEecCCeEEEEEEEeeeCCC--eEEEEEC
Q psy11143 198 --IGPQD---SGLYRCTASNLLGEDVAEGYLTV---TGAPPIFIQRPVS-TTYSTGSTSRITCLVEGHPLP--QMTWFHD 266 (940)
Q Consensus 198 --v~~~D---sG~YtC~a~N~~g~~s~s~~L~V---~~~~p~~~~~p~~-~~v~~G~~v~L~C~v~G~P~p--~ItW~k~ 266 (940)
+...| +|.|+|.|.|..+.......+.+ ...+|.+...+.. ..+..|+ +.|.|.+.|.+++ .|+|+|+
T Consensus 316 l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~ 394 (457)
T 1hzh_H 316 LTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESN 394 (457)
T ss_dssp ECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEET
T ss_pred EEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEEC
Confidence 23444 99999999987655433333332 1245555544333 3344455 9999999997554 9999999
Q ss_pred CeecCCCCc--eEEeecCe-----EEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 267 GNSLDSDDH--VTYEHDGF-----VLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 267 g~~l~~~~~--~~~~~~g~-----sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
|..+..... .....++. .|.|.....+|.|.|+|.|.|......
T Consensus 395 g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~~ 445 (457)
T 1hzh_H 395 GQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNH 445 (457)
T ss_dssp TEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGGG
T ss_pred CEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCCc
Confidence 998864322 11223332 255555556789999999999875543
No 79
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=6.6e-29 Score=272.59 Aligned_cols=266 Identities=21% Similarity=0.321 Sum_probs=199.2
Q ss_pred CceeecCCCcEEEEEEeCC-CCCCeEEEeeCCeeccc-----------------cCceEEe----eeceEEEeecccCCC
Q psy11143 146 FDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFVE-----------------DRNHKIH----RTGSLRLYNIGPQDS 203 (940)
Q Consensus 146 ~~~~v~~Ge~vtL~C~v~g-~P~p~ItW~k~g~~i~~-----------------~~~~~~~----~~~sL~I~~v~~~Ds 203 (940)
..+.+.+|++++|.|.+.+ .+.+.|+|+|++..... ..+.... .+++|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3577889999999999875 44557999985432211 0111111 235799999999999
Q ss_pred ceEEEEEEcC-CcceeeeeeeeecCCCCee-eeCCCeeEEecCCeEEEEEEE-eeeCCCeEEEEECCeecCCCCceEE--
Q psy11143 204 GLYRCTASNL-LGEDVAEGYLTVTGAPPIF-IQRPVSTTYSTGSTSRITCLV-EGHPLPQMTWFHDGNSLDSDDHVTY-- 278 (940)
Q Consensus 204 G~YtC~a~N~-~g~~s~s~~L~V~~~~p~~-~~~p~~~~v~~G~~v~L~C~v-~G~P~p~ItW~k~g~~l~~~~~~~~-- 278 (940)
|.|+|.|.|. .+..+....+.+...++.. ...+.......|+.+.|.|.+ .|.|.+.|+|++++..+........
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTS
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeee
Confidence 9999999885 5566666777776444332 334555556678999999975 6899999999999988754321110
Q ss_pred -eecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCc-eeecCCCeEEEEEeecCcCCC-eEE
Q psy11143 279 -EHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFD-MRAPAGSSVEIPCKPDGEPLP-RIS 355 (940)
Q Consensus 279 -~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~-~~v~~G~~vtL~C~v~g~P~p-~i~ 355 (940)
......|.|..+...|+|.|+|.|.|..+.......+.+.+..+|.+...+.+ ..+..|+.++|.|.+.|.|.| .|.
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~ 246 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSV 246 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEE
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEE
Confidence 00112499999999999999999999988877776677666677877655543 466788999999999999999 699
Q ss_pred EEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 356 WSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 356 W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
|+|++..+..... ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 247 W~k~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 247 WSRLDGQWPDGLL--ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp CCBSSSCCCSSCB--CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred EEECCeECCCcEE--EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 9999987754422 1223356788999999999999999999999999999999875
No 80
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=6.3e-28 Score=267.52 Aligned_cols=264 Identities=17% Similarity=0.200 Sum_probs=184.3
Q ss_pred eeEecCCceeecCCCcEEEEEEeCCC-CCCeEEEeeCCeeccc---------cCceEE--------eeeceEEEeecccC
Q psy11143 140 RLVVKPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVE---------DRNHKI--------HRTGSLRLYNIGPQ 201 (940)
Q Consensus 140 ~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p~ItW~k~g~~i~~---------~~~~~~--------~~~~sL~I~~v~~~ 201 (940)
.+...+.+..+.+|+++.|.|.+.+. |.+.|+|++++..... ..+... ....+|.|.+++.+
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 45566778899999999999999987 8889999998754210 112222 23457999999999
Q ss_pred CCceEEEEEEcCCcce-----eeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCC--eEEEEECCeecCCCC
Q psy11143 202 DSGLYRCTASNLLGED-----VAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSLDSDD 274 (940)
Q Consensus 202 DsG~YtC~a~N~~g~~-----s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p--~ItW~k~g~~l~~~~ 274 (940)
|+|.|+|.+.|..+.. ...+.|.|...+....+......+.+|+.+.|.|.+.|.|++ .++|+++|..+....
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~ 164 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQ 164 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEE
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccc
Confidence 9999999999986641 234566666433222222334677899999999999998876 899999999887543
Q ss_pred ceEEee--c-----CeEEEEeeeccCCCeEEEEEEEeCCCCc---eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEE
Q psy11143 275 HVTYEH--D-----GFVLVLNGVRESDAGVYNCVAQNSEGSA---ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPC 344 (940)
Q Consensus 275 ~~~~~~--~-----g~sL~I~~v~~~DsG~YtC~A~N~~Gs~---~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C 344 (940)
...... + ...|.|.....+|.|.|+|.|.|..+.. ..+..+.+....+|.+...+.. +.+|+.++|.|
T Consensus 165 ~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C 242 (327)
T 2wng_A 165 TNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTC 242 (327)
T ss_dssp EEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEE
T ss_pred cccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEE
Confidence 211110 1 1237777777777899999999998763 3344444455678888776554 78999999999
Q ss_pred eecCcC-CC-eEEEEeCCeeeccCC--cEEEee------eceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 345 KPDGEP-LP-RISWSKDEAEFVEDR--NHKIHR------TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 345 ~v~g~P-~p-~i~W~k~g~~i~~~~--~~~i~~------~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
.+.|.| .+ .|.|+|+|..+.... ...... ...|.|..+..+|+|.|+|.|.|..|......
T Consensus 243 ~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~ 313 (327)
T 2wng_A 243 QVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKS 313 (327)
T ss_dssp EEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEE
T ss_pred EEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhh
Confidence 999964 44 899999999875421 111111 23588899999999999999999999754433
No 81
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=1e-27 Score=265.32 Aligned_cols=270 Identities=20% Similarity=0.267 Sum_probs=198.1
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeecc----CCCeEEEEECC--E-------------ee--cCCCCeEEE---eeceE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGH----PLPQMTWFHDG--N-------------SL--DSDDHVTYE---HDGFV 100 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~----P~p~V~W~kdg--~-------------~I--~~~~~~~~~---~~gs~ 100 (940)
++.+...|..+.+.+|++++|.|.+.+. +.+.|.|+|++ . .+ ....+..+. .....
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3445566777899999999999999876 44589999954 1 11 112333332 12345
Q ss_pred EEEcccccCCCeEEEEE-EEeCCCceEEEEEEEEecccCCeeEecCCceeecCC---CcEEEEEE-eCCCCCCeEEEeeC
Q psy11143 101 LVLNGVRESDAGVYNCV-AQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAG---SSVEIPCK-PDGEPLPRISWSKD 175 (940)
Q Consensus 101 L~I~~v~~~DsG~YtC~-a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~G---e~vtL~C~-v~g~P~p~ItW~k~ 175 (940)
|.|.+++.+|+|.|+|. +.+..+.....+.|.|...+...+...+....+.+| +.+.|.|. +.+.|.+.++|+++
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 89999999999999998 555566666677777776433333445667788888 78999998 78899999999995
Q ss_pred Ceeccc-----cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeee-eCCCeeEEecCCeEEE
Q psy11143 176 EAEFVE-----DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFI-QRPVSTTYSTGSTSRI 249 (940)
Q Consensus 176 g~~i~~-----~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~-~~p~~~~v~~G~~v~L 249 (940)
+..... .....+.....|.|.++..+|+|.|+|.|.|..+..+..+.|.|.. +|.+. ..+....+.+|+.++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~-~P~~~~~~~~~~~~~~g~~~~l 252 (331)
T 3u83_A 174 LKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY-EPEVTIEGFDGNWYLQRMDVKL 252 (331)
T ss_dssp SCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE-EEEEEEECCCSCCBTTCCCEEE
T ss_pred CCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec-CCeEEEecCCCceEeCCCeEEE
Confidence 332211 1111222334688888999999999999999999888888888874 44444 4445566889999999
Q ss_pred EEEEeeeCCCe-EEEEECCeecCCCCceEEeecCeEEEEe-eeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 250 TCLVEGHPLPQ-MTWFHDGNSLDSDDHVTYEHDGFVLVLN-GVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 250 ~C~v~G~P~p~-ItW~k~g~~l~~~~~~~~~~~g~sL~I~-~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
.|.+.|.|.|. +.|++++..+..... . .+.+|.|. ++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 253 ~C~~~g~p~p~~i~W~~~~~~~~~~~~--~--~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 320 (331)
T 3u83_A 253 TCKADANPPATEYHWTTLNGSLPKGVE--A--QNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITE 320 (331)
T ss_dssp EEEEEEESCCCEEEEEETTBSCCTTEE--E--ETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC
T ss_pred EEeCcCCCCCCEEEEEECCCcccccce--e--cCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEec
Confidence 99999999998 999999998865422 1 33459999 9999999999999999999988877777754
No 82
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=1.4e-27 Score=264.38 Aligned_cols=267 Identities=18% Similarity=0.282 Sum_probs=198.7
Q ss_pred CeeEecCCceeecCCCcEEEEEEeCCC----CCCeEEEeeCCe--e-------------c--cccCceEEe----eeceE
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPDGE----PLPRISWSKDEA--E-------------F--VEDRNHKIH----RTGSL 193 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~g~----P~p~ItW~k~g~--~-------------i--~~~~~~~~~----~~~sL 193 (940)
+.+...+.++.+.+|++++|.|.+.+. +.+.+.|++++. . + ....+..+. .+++|
T Consensus 15 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L 94 (331)
T 3u83_A 15 SQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTI 94 (331)
T ss_dssp ------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCE
T ss_pred cceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceE
Confidence 344555667889999999999999876 445799999541 1 1 112333332 24579
Q ss_pred EEeecccCCCceEEEE-EEcCCcceeeeeeeeecCCCCee-eeCCCeeEEecC---CeEEEEEE-EeeeCCCeEEEEECC
Q psy11143 194 RLYNIGPQDSGLYRCT-ASNLLGEDVAEGYLTVTGAPPIF-IQRPVSTTYSTG---STSRITCL-VEGHPLPQMTWFHDG 267 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~-a~N~~g~~s~s~~L~V~~~~p~~-~~~p~~~~v~~G---~~v~L~C~-v~G~P~p~ItW~k~g 267 (940)
.|.+++.+|+|.|+|. +.+..+.....+.|.|...+... ...+....+.+| +.+.|.|. +.+.|.|.++|++++
T Consensus 95 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~ 174 (331)
T 3u83_A 95 RLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRL 174 (331)
T ss_dssp EECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESS
T ss_pred EEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCC
Confidence 9999999999999998 55667777888888888543332 235666778888 78999997 889999999999963
Q ss_pred eecC-------CCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcC-CceeecCCCe
Q psy11143 268 NSLD-------SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKP-FDMRAPAGSS 339 (940)
Q Consensus 268 ~~l~-------~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p-~~~~v~~G~~ 339 (940)
.... ......+ ...|.|..+..+|+|.|+|.|.|..|..+.++.|.|. .+|.+...+ ....+.+|++
T Consensus 175 ~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~--~~P~~~~~~~~~~~~~~g~~ 249 (331)
T 3u83_A 175 KGEAEYQEIRNPNGTVTV---ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQ--YEPEVTIEGFDGNWYLQRMD 249 (331)
T ss_dssp CCEEEEEEEECTTSCEEE---EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEE--EEEEEEEECCCSCCBTTCCC
T ss_pred CCccccceeECCCCcEEE---EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEe--cCCeEEEecCCCceEeCCCe
Confidence 2221 1111111 1248888889999999999999999887776666664 566666444 4456889999
Q ss_pred EEEEEeecCcCCCe-EEEEeCCeeeccCCcEEEeeeceEEEe-cCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 340 VEIPCKPDGEPLPR-ISWSKDEAEFVEDRNHKIHRTGSLRLY-NIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 340 vtL~C~v~g~P~p~-i~W~k~g~~i~~~~~~~i~~~~sL~I~-~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
++|.|.+.|.|.|. |.|++++..+.... ...+++|.|. ++..+|+|.|+|.|.|..|..+.++.|.|+..+
T Consensus 250 ~~l~C~~~g~p~p~~i~W~~~~~~~~~~~---~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 250 VKLTCKADANPPATEYHWTTLNGSLPKGV---EAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp EEEEEEEEEESCCCEEEEEETTBSCCTTE---EEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred EEEEEeCcCCCCCCEEEEEECCCcccccc---eecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 99999999999998 99999998875442 2356789999 999999999999999999999999999998764
No 83
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=1.2e-29 Score=293.43 Aligned_cols=302 Identities=15% Similarity=0.231 Sum_probs=204.9
Q ss_pred cccEEEECCCCCCCCeEEEEEEEcCCceEEEEEEEEEe----CCCeEEeCCCcEEEecCCeEEEEEEeecc-CCC-eEEE
Q psy11143 6 SSTELVISGVQREHGGRYSCVAGNPAGVYRGDLHVTVN----APPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP-QMTW 79 (940)
Q Consensus 6 s~~tL~I~~v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~----~pP~~~~~p~~~~V~eGesv~L~C~v~g~-P~p-~V~W 79 (940)
+..+|+|.+++.+|+|.|+|.+.|..+.......|.|. .+|.+...+....+.+|+.++|.|.+.|. |.+ .|.|
T Consensus 76 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W 155 (434)
T 1igy_B 76 NTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW 155 (434)
T ss_dssp CBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEE
T ss_pred CEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEE
Confidence 35689999999999999999999865443344556665 24555443333346899999999999985 766 9999
Q ss_pred EECCEeecCC--CC----eEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEec----------ccCCeeEe
Q psy11143 80 FHDGNSLDSD--DH----VTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING----------HRAPRLVV 143 (940)
Q Consensus 80 ~kdg~~I~~~--~~----~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~----------~~~P~~~~ 143 (940)
+|++..+... .. ..+. ....|.|.++..+| |.|+|.|.|..+.......+.+.+ ...|.+.+
T Consensus 156 ~k~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~ 233 (434)
T 1igy_B 156 NSGSLSSGVHTFPAVLQSDLYT-LSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFI 233 (434)
T ss_dssp TTTTBCSSEEECCCEECSSCEE-EEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEE
T ss_pred eeCCcCCCeEecCceecCCcEE-EEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEE
Confidence 9998753210 00 0111 12347999999999 999999999998865554443321 00144433
Q ss_pred cCCcee--ecCCCcEEEEEEeCCCC----CCeEEEeeCCeeccccCce--------EEeeeceEEEeecccCCCceEEEE
Q psy11143 144 KPFDMR--APAGSSVEIPCKPDGEP----LPRISWSKDEAEFVEDRNH--------KIHRTGSLRLYNIGPQDSGLYRCT 209 (940)
Q Consensus 144 ~p~~~~--v~~Ge~vtL~C~v~g~P----~p~ItW~k~g~~i~~~~~~--------~~~~~~sL~I~~v~~~DsG~YtC~ 209 (940)
.+.... +.+|+.++|.|.+.|.+ .+.|+|++++..+...... .....+.|.|.++..+|+|.|+|.
T Consensus 234 ~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 313 (434)
T 1igy_B 234 FPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCR 313 (434)
T ss_dssp ECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCC
T ss_pred eCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEE
Confidence 333322 88999999999999874 3589999998776432111 111234699999999999999999
Q ss_pred EEcCCcceeeeeeeee--c-CCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCC--eEEEEECCeecCCCCceEE--eecC
Q psy11143 210 ASNLLGEDVAEGYLTV--T-GAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSLDSDDHVTY--EHDG 282 (940)
Q Consensus 210 a~N~~g~~s~s~~L~V--~-~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p--~ItW~k~g~~l~~~~~~~~--~~~g 282 (940)
|.|..+.......+.+ . ..+|.+...+.......|+.++|.|.+.|.+++ .|+|+|+|..+........ ..+|
T Consensus 314 a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g 393 (434)
T 1igy_B 314 VNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDG 393 (434)
T ss_dssp BCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSS
T ss_pred EECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCC
Confidence 9998886533333322 1 135555444433334467789999999996433 8999999998853321111 2233
Q ss_pred -----eEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 283 -----FVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 283 -----~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
..|.|.....+|.|.|+|.|.|.....
T Consensus 394 ~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 425 (434)
T 1igy_B 394 SYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHN 425 (434)
T ss_dssp CEEEEEEEEEEHHHHHTTCCEEEEEEETTSGG
T ss_pred cEEEEEEEEECchhccCCCEEEEEEEcCCCCC
Confidence 236677777788999999999987553
No 84
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=5.5e-28 Score=265.21 Aligned_cols=262 Identities=18% Similarity=0.279 Sum_probs=193.6
Q ss_pred CcEEEecCCeEEEEEEeec-cCCCeEEEEECCEeec---------------C--CCCeEEE---eeceEEEEcccccCCC
Q psy11143 53 VSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLD---------------S--DDHVTYE---HDGFVLVLNGVRESDA 111 (940)
Q Consensus 53 ~~~~V~eGesv~L~C~v~g-~P~p~V~W~kdg~~I~---------------~--~~~~~~~---~~gs~L~I~~v~~~Ds 111 (940)
..+++.+|++++|.|.+.+ .+.+.|+|+|++.... . ..+..+. .....|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 4677899999999999865 4455899998653211 1 1112221 1224589999999999
Q ss_pred eEEEEEEEeCC-CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeeccccCc----e
Q psy11143 112 GVYNCVAQNSE-GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRN----H 185 (940)
Q Consensus 112 G~YtC~a~n~~-g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~~~~~----~ 185 (940)
|.|+|.|.|.. |.......+.+...+.+.+...+.......|+.+.|.|.+ .|.|.+.|+|++++..+..... .
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTS
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeee
Confidence 99999999864 4445566677766554455556666777789999999986 5799999999999887754321 1
Q ss_pred EEeeeceEEEeecccCCCceEEEEEEcCCcceee--eeeeeecCCCCeeee-CCCeeEEecCCeEEEEEEEeeeCCC-eE
Q psy11143 186 KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA--EGYLTVTGAPPIFIQ-RPVSTTYSTGSTSRITCLVEGHPLP-QM 261 (940)
Q Consensus 186 ~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~--s~~L~V~~~~p~~~~-~p~~~~v~~G~~v~L~C~v~G~P~p-~I 261 (940)
.....+.|.|..+..+|+|.|+|.|.|..+.... .+.|.|. .+|.+.. ......+..|+.++|.|.+.|.|.| .+
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v 245 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ-YAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKS 245 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC-EEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEE
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe-cCCeeEEcccceeeeeccccEEEEEEEecCCCCcEE
Confidence 1223346999999999999999999998776544 4455555 3444443 3444567788999999999999998 79
Q ss_pred EEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 262 TWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 262 tW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.|+|++..+..... ..++..|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 246 ~W~k~~~~~~~~~~---~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 246 VWSRLDGQWPDGLL---ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp ECCBSSSCCCSSCB---CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEE
T ss_pred EEEECCeECCCcEE---EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 99999988865422 2345557788999999999999999999998888777775
No 85
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.95 E-value=1.3e-26 Score=271.23 Aligned_cols=301 Identities=16% Similarity=0.248 Sum_probs=201.3
Q ss_pred CcccEEEECCCCCCCCeEEEEEEEcCCce------EEEEEEEEEeC----CCeEEeCCCcEEEecCCeEEEEEEeecc-C
Q psy11143 5 RSSTELVISGVQREHGGRYSCVAGNPAGV------YRGDLHVTVNA----PPIFIQRPVSTTYSTGSTSRITCLVEGH-P 73 (940)
Q Consensus 5 ~s~~tL~I~~v~~sDsG~Y~C~a~n~~g~------~~~~v~l~V~~----pP~~~~~p~~~~V~eGesv~L~C~v~g~-P 73 (940)
++..+|+|.+++.+|+|.|+|.+.|..|. ....+.|.|.. +|.+...+.. .+.+|+.++|.|.+.|. |
T Consensus 77 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~L~C~~~g~~P 155 (475)
T 1iga_A 77 ATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVVIACLVQGFFP 155 (475)
T ss_pred CCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEEEEEEEeeecC
Confidence 34578999999999999999999987652 22345666652 4555443322 23799999999999986 6
Q ss_pred C-C-eEEEEECCEeecCCCCe-EE-Eee-----ceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEec---------
Q psy11143 74 L-P-QMTWFHDGNSLDSDDHV-TY-EHD-----GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING--------- 135 (940)
Q Consensus 74 ~-p-~V~W~kdg~~I~~~~~~-~~-~~~-----gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~--------- 135 (940)
. + .|.|++++......... .. ..+ ...|.|..+..+|+|.|+|.|.|..+.. ....+.+.+
T Consensus 156 ~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~-~~~~v~l~V~~~~~~~~~ 234 (475)
T 1iga_A 156 QEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS-QDVTVPCPVPSTPPTPSP 234 (475)
T ss_pred CCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc-eeeeEecccccCcccccc
Confidence 5 4 99999988542211000 00 011 1347888999999999999999988642 223333211
Q ss_pred ---------ccCCeeEe-cCCceeecCCCcEEEEEEeCCCCC---CeEEEeeCCeeccccCc--------eEEeeeceEE
Q psy11143 136 ---------HRAPRLVV-KPFDMRAPAGSSVEIPCKPDGEPL---PRISWSKDEAEFVEDRN--------HKIHRTGSLR 194 (940)
Q Consensus 136 ---------~~~P~~~~-~p~~~~v~~Ge~vtL~C~v~g~P~---p~ItW~k~g~~i~~~~~--------~~~~~~~sL~ 194 (940)
...|.+.. .+....+.+|++++|.|.+.|.++ +.|+| + +..+..... ......+.|.
T Consensus 235 ~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~ 312 (475)
T 1iga_A 235 STPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLP 312 (475)
T ss_pred cccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEE
Confidence 01344423 333344689999999999998644 58999 4 333321110 0112345799
Q ss_pred EeecccCCCceEEEEEEcCCcceeeeeeeee--cCCCCeeeeCCC-eeEEecCCeEEEEEEEeee-CC-CeEEEEECCee
Q psy11143 195 LYNIGPQDSGLYRCTASNLLGEDVAEGYLTV--TGAPPIFIQRPV-STTYSTGSTSRITCLVEGH-PL-PQMTWFHDGNS 269 (940)
Q Consensus 195 I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V--~~~~p~~~~~p~-~~~v~~G~~v~L~C~v~G~-P~-p~ItW~k~g~~ 269 (940)
|.++..+|+|.|+|.|.|..+.......|.+ ...+|.+...+. ...+..|+.+.|.|.+.|. |+ +.|+|+|+|..
T Consensus 313 I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~ 392 (475)
T 1iga_A 313 GCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQE 392 (475)
T ss_pred EchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEE
Confidence 9999999999999999999887654444532 225565554433 3346789999999999996 43 49999999999
Q ss_pred cCCCCce----EEe---ecC-----eEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 270 LDSDDHV----TYE---HDG-----FVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 270 l~~~~~~----~~~---~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
+...... ... .+| ..|.|.....+|.|.|+|.|.|.....
T Consensus 393 l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~ 444 (475)
T 1iga_A 393 LPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL 444 (475)
T ss_pred CCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCC
Confidence 8755311 112 222 236677777788999999999987553
No 86
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=4.4e-28 Score=263.09 Aligned_cols=265 Identities=17% Similarity=0.254 Sum_probs=205.4
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE--eeceEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE--HDGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~--~~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.+...+....+.+|++++|.|.+.+. |.|++++.. ...+. .....|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 47889889999999999999999999873 999976542 22222 22357899999999999999999998
Q ss_pred CCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCC--CeEEEeeC-CeeccccCceEEeeeceEEEeec
Q psy11143 122 EGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL--PRISWSKD-EAEFVEDRNHKIHRTGSLRLYNI 198 (940)
Q Consensus 122 ~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~--p~ItW~k~-g~~i~~~~~~~~~~~~sL~I~~v 198 (940)
.+.....+.|.|...+. .+...+....+.+|+.+.|.|.+.+ |. +.++|+++ +..+....+......+.|.|.++
T Consensus 74 ~~~~~~~~~l~V~~~~~-~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~ 151 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPAR-PWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRA 151 (292)
T ss_dssp ---CCEEECCEECCSSC-CEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTC
T ss_pred CCCcceEEEEEEcCccc-cccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCC
Confidence 88777777788776433 3455667888999999999999998 54 78999996 55555555555555667999999
Q ss_pred ccCCCceEEEEEEcCCcce-eeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEeeeCC-CeEEEEECCeecCCC
Q psy11143 199 GPQDSGLYRCTASNLLGED-VAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEGHPL-PQMTWFHDGNSLDSD 273 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~-p~ItW~k~g~~l~~~ 273 (940)
+.+|+|.|+|.+.|..+.. +..+.|.|.. .+|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+...
T Consensus 152 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~ 231 (292)
T 4dkd_C 152 KFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIP 231 (292)
T ss_dssp CGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCC
T ss_pred CHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccC
Confidence 9999999999999887754 4467777774 3777777777777789999999999998765 478899998877654
Q ss_pred CceEEee----cCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 274 DHVTYEH----DGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 274 ~~~~~~~----~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
....... ...+|.|.++..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 232 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 281 (292)
T 4dkd_C 232 QQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVE 281 (292)
T ss_dssp BEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred ccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEee
Confidence 4333222 223599999999999999999999999988888887764
No 87
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=3.3e-27 Score=253.92 Aligned_cols=238 Identities=19% Similarity=0.260 Sum_probs=184.8
Q ss_pred eeecCCCcEEEEEEeCC-CCCC--eEEEeeCCeeccccCceEEeeeceEEEeec---ccCCCce--EEEEEEcCCcceee
Q psy11143 148 MRAPAGSSVEIPCKPDG-EPLP--RISWSKDEAEFVEDRNHKIHRTGSLRLYNI---GPQDSGL--YRCTASNLLGEDVA 219 (940)
Q Consensus 148 ~~v~~Ge~vtL~C~v~g-~P~p--~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v---~~~DsG~--YtC~a~N~~g~~s~ 219 (940)
..+.+|++++|.|.+.+ .|.+ .++|++++..+.. ........+.+..+ +.+|+|. |+|.+.|..+..+.
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~ 89 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 89 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC---EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc---eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEE
Confidence 36889999999999998 7776 9999999988754 22223345666555 7788885 99999999999888
Q ss_pred eeeeeecCCCC-eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEE
Q psy11143 220 EGYLTVTGAPP-IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVY 298 (940)
Q Consensus 220 s~~L~V~~~~p-~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~Y 298 (940)
.+.|.|...++ .+. +....+.+|+.+.|.|.+. |.+.|+| +|..+..... ...|.|..+..+|+|.|
T Consensus 90 ~~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~------~~~l~i~~~~~~~~g~Y 157 (265)
T 2oz4_A 90 LQTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGP------RAQLLLKATPEDNGRSF 157 (265)
T ss_dssp EEEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCSS------EECCEEECCGGGTTEEE
T ss_pred EEEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCC------cEEEEEccccccCCceE
Confidence 88999875443 333 3456788999999999998 8999999 8877743321 12388999999999999
Q ss_pred EEEEEeCC-CCce---eEEEEEEeeccCCeEEEc--CCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEe
Q psy11143 299 NCVAQNSE-GSAE---SVAMIRINGHRAPRLVVK--PFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH 372 (940)
Q Consensus 299 tC~A~N~~-Gs~~---~s~~l~V~~~~~P~i~~~--p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~ 372 (940)
+|.|.|.. |... ..+.|.|. .+|.+... |.+..+.+|+.++|.|.+.|+|.|.+.|+|++..+.
T Consensus 158 ~C~a~n~~~g~~~~~s~~~~l~V~--~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~-------- 227 (265)
T 2oz4_A 158 SCSATLEVAGQLIHKNQTRELRVL--YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL-------- 227 (265)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEEE--EEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEEC--------
T ss_pred EEEEEcCCCCCcccccccEEEEEE--eCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccC--------
Confidence 99998654 6654 44455554 56665443 446688999999999999999999999999987332
Q ss_pred eeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 373 RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 373 ~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
..+.+. .++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 228 ~~g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 228 PIGESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp CTTSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 223333 37889999999999999999999999999753
No 88
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=4.7e-27 Score=260.54 Aligned_cols=263 Identities=19% Similarity=0.329 Sum_probs=182.5
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeecc-CCCeEEEEECCEeec----C-----CCCeEEE-------eeceEEEEccccc
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGNSLD----S-----DDHVTYE-------HDGFVLVLNGVRE 108 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~-P~p~V~W~kdg~~I~----~-----~~~~~~~-------~~gs~L~I~~v~~ 108 (940)
..+...|..+.+.+|++++|.|.+.+. |.+.|.|+|++..+. . ..+.... .....|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 456667888999999999999999987 888999999875421 0 1122221 2234589999999
Q ss_pred CCCeEEEEEEEeCCCceE-----EEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCC--eEEEeeCCeeccc
Q psy11143 109 SDAGVYNCVAQNSEGSAE-----SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP--RISWSKDEAEFVE 181 (940)
Q Consensus 109 ~DsG~YtC~a~n~~g~~~-----~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p--~ItW~k~g~~i~~ 181 (940)
+|+|.|+|.|.|..+... ..+.|.|...+.+.....+ ...+.+|+.+.|.|.+.+.|++ .++|++++..+..
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 999999999999876422 2456777765544344333 4678899999999999987765 8999999988864
Q ss_pred cCce--------EEeeeceEEEeecccCCCceEEEEEEcCCcce---eeeeeeeec-CCCCeeeeCCCeeEEecCCeEEE
Q psy11143 182 DRNH--------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGED---VAEGYLTVT-GAPPIFIQRPVSTTYSTGSTSRI 249 (940)
Q Consensus 182 ~~~~--------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~---s~s~~L~V~-~~~p~~~~~p~~~~v~~G~~v~L 249 (940)
.... .+.....|.|.....+|.|.|+|.|.|..+.. .....+.+. ..+|.+...+.. +.+|+.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l 240 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNV 240 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEE
Confidence 3321 12223357777777777899999999987652 334444322 245665554433 779999999
Q ss_pred EEEEeeeCC-C-eEEEEECCeecCCC--CceEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCcee
Q psy11143 250 TCLVEGHPL-P-QMTWFHDGNSLDSD--DHVTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 250 ~C~v~G~P~-p-~ItW~k~g~~l~~~--~~~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~ 311 (940)
.|.+.|.|+ + .|+|+++|..+... .......++ ..|.|..+..+|+|.|+|.|.|..+....
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVS 311 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEE
T ss_pred EEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCch
Confidence 999999644 4 89999999988543 122223333 34888889999999999999999987644
No 89
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=99.95 E-value=3.7e-30 Score=302.63 Aligned_cols=149 Identities=29% Similarity=0.475 Sum_probs=128.0
Q ss_pred HhcccccccccccCCCcccccccccccCCcccCCCCCcccccchhhhccccccccCCCcCCCcCCCCCCCCCCCCccccc
Q psy11143 646 ANLSGCMEHQRTANCSDLCFHTKYRTIDGTCNNLQHPMWGASLTGFRRLLKPIYENGFSTPVAPILSSPMAGNIDPFVGA 725 (940)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (940)
+++|||..+....+|+.. .||||+||+|||+.||.||||+|||+|||||.|+||+++|.||+..+.++|.
T Consensus 1 ~~~~gc~~~~~~~~C~~~---~~yRt~DG~CNNl~~P~wGaa~t~f~R~lpp~Y~DGv~~Pr~~~~~~~~~g~------- 70 (595)
T 3q9k_A 1 SWEVGCGAPVPLVKCDEN---SPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTRNGF------- 70 (595)
T ss_dssp CCCSCCCSSCCCCCCCSS---CSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTB-------
T ss_pred CCCCCCCCCCCCCCCCCC---CCccCCCCCccCcCCcccCCCCCCccCCCCcccccccccccccccccccCCC-------
Confidence 478999999999999875 8999999999999999999999999999999999999999999998888775
Q ss_pred ccccccCCCCcCCccchhhhhhhhhcccCCCCccccceeecccCCCccccccchhhhhhhhccccCCCCccccceecccc
Q psy11143 726 ILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILEDQVDGGRVGPTMRCLLIDQFKRIRDGNIDPFVGAILEDQV 805 (940)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 805 (940)
. +
T Consensus 71 ---------------------------------------------------------------------~---------l 72 (595)
T 3q9k_A 71 ---------------------------------------------------------------------R---------V 72 (595)
T ss_dssp ---------------------------------------------------------------------C---------C
T ss_pred ---------------------------------------------------------------------C---------C
Confidence 2 5
Q ss_pred CCCCCCcchhhhhhhhhhhcccCCcccccCCCCCChhHHhHhhhceeeeeeecCCCceeeEEEeecCCCCccccCCCcee
Q psy11143 806 DGGRVGPTMRCLLIDQFKRIRDGDRFWYENPSTFKPAQLTQIKQASLARVICDSGDRLTEVRVCFSPRPTTSITPDPVIT 885 (940)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (940)
|.+|. +++.|.+ .++..+.+|+.+|
T Consensus 73 P~~R~-------------------------------------VS~~l~~------------------~~~~~~~~~~~~t 97 (595)
T 3q9k_A 73 PLARE-------------------------------------VSNKIVG------------------YLDEEGVLDQNRS 97 (595)
T ss_dssp CCHHH-------------------------------------HHHHHTC------------------CSCCTTCEEEEEE
T ss_pred CCHHH-------------------------------------HHHHHHh------------------cccccCCCCCCch
Confidence 66666 5554443 1233455788899
Q ss_pred cccccccceecCCCCCCccccccccc-cCCCcccccCCCCCccceecCCCCCC
Q psy11143 886 HMVMQWGQFLDHDLDHAIPATSLESW-EGIDCKKSCAFSPPCFPMEVPHDDPG 937 (940)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (940)
+|+||||||++||+.++....+...| .|++|+.+|...++||||+||++||.
T Consensus 98 ~~~~~wGQfi~HDi~~t~~~~~~~~~~~~~~C~~~c~~~~~C~pI~ip~~Dp~ 150 (595)
T 3q9k_A 98 LLFMQWGQIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPK 150 (595)
T ss_dssp HHHHHHHHHHHHHHCCCCBCCSCTTCSHHHHHHHHCCCBTTBCCEECCTTCHH
T ss_pred HHHHHHHHHHHhhhhccCccccccccCCCcCccccccCCCCceeeeCCCCCCc
Confidence 99999999999999988777665555 78899999999999999999999985
No 90
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=257.34 Aligned_cols=261 Identities=16% Similarity=0.225 Sum_probs=184.8
Q ss_pred eeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe----eeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 140 RLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH----RTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 140 ~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~----~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
.+........+.+|++++|.|.+.+. ++|++++..+.. +.... ..+.|.|.+++.+|+|.|+|.|.|..|
T Consensus 2 ~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (289)
T 3mjg_X 2 VVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRG 75 (289)
T ss_dssp CBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC---
T ss_pred eecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCC
Confidence 34444556788999999999999874 999999887632 11111 135799999999999999999999887
Q ss_pred c---eeeeeeeeecCCCCeeeeCCCe---eEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEee
Q psy11143 216 E---DVAEGYLTVTGAPPIFIQRPVS---TTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNG 289 (940)
Q Consensus 216 ~---~s~s~~L~V~~~~p~~~~~p~~---~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~ 289 (940)
. ....+.+.|......+...... ..+.+|+.+.|.|.+. .|.|.++|++++....... ....... +.
T Consensus 76 ~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~--~~~~~~~-~~--- 148 (289)
T 3mjg_X 76 LETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV--PYDHQRG-FS--- 148 (289)
T ss_dssp ---CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC--CEETTTE-EE---
T ss_pred CCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce--eecCCcC-ee---
Confidence 6 3344445444212222222222 6788999999999998 7888999998753222211 1111111 21
Q ss_pred eccCCCeEEEEEEEeCCCCcee-EEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCc
Q psy11143 290 VRESDAGVYNCVAQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRN 368 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs~~~-s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~ 368 (940)
...|+|.|+|.|.|..+.... ...+.|....+|.+...+....+.+|++++|.|.+.|.|.|.|.|++++........
T Consensus 149 -~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~ 227 (289)
T 3mjg_X 149 -GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVE 227 (289)
T ss_dssp -ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCC
T ss_pred -eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCccc
Confidence 357999999999987765543 345566544577777777777899999999999999999999999987754322111
Q ss_pred -E-E------EeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 369 -H-K------IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 369 -~-~------i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
. . ....++|.|.++..+|+|.|+|.|.|..|....++.|.|.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 228 PVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp CEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC-
T ss_pred ccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEec
Confidence 1 1 11346899999999999999999999999999999999998764
No 91
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=1.4e-26 Score=249.00 Aligned_cols=236 Identities=19% Similarity=0.322 Sum_probs=184.5
Q ss_pred EEecCCeEEEEEEeec-cCCC--eEEEEECCEeecCCCCeEEEeeceEEEEccc---ccCCCeE--EEEEEEeCCCceEE
Q psy11143 56 TYSTGSTSRITCLVEG-HPLP--QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGV---RESDAGV--YNCVAQNSEGSAES 127 (940)
Q Consensus 56 ~V~eGesv~L~C~v~g-~P~p--~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v---~~~DsG~--YtC~a~n~~g~~~~ 127 (940)
.+.+|+.++|.|.+.| .|.+ .|+|+|+|..+.. .+...+..+.+..+ +.+|+|. |+|.+.|..|....
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~ 89 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 89 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEE
Confidence 6889999999999998 7776 9999999998864 33333444566555 7788885 99999999998888
Q ss_pred EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEE
Q psy11143 128 VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYR 207 (940)
Q Consensus 128 ~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~Yt 207 (940)
.+.|.|...+.|.+.. ....+.+|+.++|.|.+. |.+.++| +|..+.... ..+.|.|..+..+|.|.|+
T Consensus 90 ~~~l~V~~~p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~-----~~~~l~i~~~~~~~~g~Y~ 158 (265)
T 2oz4_A 90 LQTVTIYSFPAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG-----PRAQLLLKATPEDNGRSFS 158 (265)
T ss_dssp EEEEEEECCCCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS-----SEECCEEECCGGGTTEEEE
T ss_pred EEEEEEeCCCCceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC-----CcEEEEEccccccCCceEE
Confidence 8888887765555553 456688899999999998 8899999 777663322 2346889999999999999
Q ss_pred EEEEcCC-ccee---eeeeeeecCCCCeeeeC--CCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeec
Q psy11143 208 CTASNLL-GEDV---AEGYLTVTGAPPIFIQR--PVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD 281 (940)
Q Consensus 208 C~a~N~~-g~~s---~s~~L~V~~~~p~~~~~--p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~ 281 (940)
|.|.|.. |... ..+.|.|. .+|.+... +....+.+|+.++|.|.+.|+|.|.++|++++..+.. .
T Consensus 159 C~a~n~~~g~~~~~s~~~~l~V~-~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~--------~ 229 (265)
T 2oz4_A 159 CSATLEVAGQLIHKNQTRELRVL-YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP--------I 229 (265)
T ss_dssp EEEEEECSSSEEEEEEEEEEEEE-EEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC--------T
T ss_pred EEEEcCCCCCcccccccEEEEEE-eCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCC--------C
Confidence 9998644 6544 56677776 34444332 5577899999999999999999999999999873222 2
Q ss_pred CeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 282 GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 282 g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
+. + ..+..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 230 g~-~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 230 GE-S--VTVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp TS-C--EECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred Cc-E--EEeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 33 2 2478899999999999999999888888875
No 92
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=9.5e-27 Score=252.72 Aligned_cols=261 Identities=16% Similarity=0.200 Sum_probs=180.8
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEee---ceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD---GFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~---gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
|.+...+....+.+|++++|.|.+.+. |+|+|++..+. .......+ ...|.|.+++.+|+|.|+|.|.|..
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 344555667889999999999999874 99999998873 12222222 2568999999999999999999988
Q ss_pred CceE-EEEEEEEecc--cCCeeEecCCc--eeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEee
Q psy11143 123 GSAE-SVAMIRINGH--RAPRLVVKPFD--MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYN 197 (940)
Q Consensus 123 g~~~-~~~~L~V~~~--~~P~~~~~p~~--~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~ 197 (940)
|... ....+.|.+. ..+.+...+.. ..+.+|+.+.|.|.+. .|.+.++|++.+........ ......+.
T Consensus 75 g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~--~~~~~~~~--- 148 (289)
T 3mjg_X 75 GLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVP--YDHQRGFS--- 148 (289)
T ss_dssp ----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCC--EETTTEEE---
T ss_pred CCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcccee--ecCCcCee---
Confidence 7622 2334444433 22222121111 6789999999999999 77889999886422211111 11111111
Q ss_pred cccCCCceEEEEEEcCCcce-eeeeeeeecC-CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCc
Q psy11143 198 IGPQDSGLYRCTASNLLGED-VAEGYLTVTG-APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH 275 (940)
Q Consensus 198 v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~-~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~ 275 (940)
...|+|.|+|.|.|..+.. +....+.|.. .+|.+...+....+.+|++++|.|.+.|.|.|.++|++++........
T Consensus 149 -~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~ 227 (289)
T 3mjg_X 149 -GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVE 227 (289)
T ss_dssp -ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCC
T ss_pred -eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCccc
Confidence 3679999999999876654 3344566654 456666666667899999999999999999999999988765433221
Q ss_pred eE-Ee------ecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 276 VT-YE------HDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 276 ~~-~~------~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
.. .. ....+|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 228 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~ 278 (289)
T 3mjg_X 228 PVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITV 278 (289)
T ss_dssp CEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred ccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEE
Confidence 11 11 1224599999999999999999999999999999998875
No 93
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=9.4e-25 Score=247.15 Aligned_cols=351 Identities=20% Similarity=0.294 Sum_probs=238.7
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEeecC-----CCCeEEEe--eceEEEEcccccCCCeEEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLDS-----DDHVTYEH--DGFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I~~-----~~~~~~~~--~gs~L~I~~v~~~DsG~Yt 115 (940)
+|.+.. +.+..+.+|+.++|.|.+.|.|.+.|+|+|+ |..+.. ..+..+.. ....|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 466665 6677888999999999999999999999999 888864 23444442 3456899999999999999
Q ss_pred EEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccC--ceEEee---e
Q psy11143 116 CVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR--NHKIHR---T 190 (940)
Q Consensus 116 C~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~--~~~~~~---~ 190 (940)
|.|.|..|.....+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... +..+.. .
T Consensus 80 C~a~n~~g~~~~~~~l~V~~--~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 157 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEY--APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRK 157 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEE--EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSC
T ss_pred EEEEeCCCCcceEEEEEEEe--CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCE
Confidence 99999999887788787764 4555555555578999999999999999999999999998886543 333332 2
Q ss_pred ceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCee--EEecCCeEEEEEEEee----eCCC--eEE
Q psy11143 191 GSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVST--TYSTGSTSRITCLVEG----HPLP--QMT 262 (940)
Q Consensus 191 ~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~--~v~~G~~v~L~C~v~G----~P~p--~It 262 (940)
..|.|.++..+|+|.|+|.|.|..|.......+.+...+. .|... ....+..+.|.|.... .|.. .+.
T Consensus 158 ~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~----~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~ 233 (389)
T 2jll_A 158 MILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPS----SPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVD 233 (389)
T ss_dssp EEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCC----CCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCC----CCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEE
Confidence 3699999999999999999999999988887777753322 11111 2234578899997422 2322 577
Q ss_pred EEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee-----ccCCeEEEcCCceeecCC
Q psy11143 263 WFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING-----HRAPRLVVKPFDMRAPAG 337 (940)
Q Consensus 263 W~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~-----~~~P~i~~~p~~~~v~~G 337 (940)
|.+++..... ..........+.|.++...+.|.|+|.|.|..|....+..+.+.. ..+|.+.. ....+
T Consensus 234 ~~~~~~~~~~--~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~~-----~~~~~ 306 (389)
T 2jll_A 234 VKEVASEIWK--IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHG-----QPSSG 306 (389)
T ss_dssp EEETTCSCCE--EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEEE-----EEETT
T ss_pred EEECCCcccE--EeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCcccc-----ccCcC
Confidence 8877642210 111111234699999999999999999999998765544333321 22232221 22356
Q ss_pred CeEEEEEeecC---cCCCeEE--EEeCCeeeccCCcEEEe-eeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 338 SSVEIPCKPDG---EPLPRIS--WSKDEAEFVEDRNHKIH-RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 338 ~~vtL~C~v~g---~P~p~i~--W~k~g~~i~~~~~~~i~-~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
..+.|.+.... .|.-.+. |...+..-.. ....+. ....+.|.++.......|++.|.|..|....+ .+.+..
T Consensus 307 ~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s-~~~~~T 384 (389)
T 2jll_A 307 KSFKLSITKQDDGGAPILEYIVKYRSKDKEDQW-LEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPT-VYEFSM 384 (389)
T ss_dssp TEEEEEECCCCCCSSCCCEEEEEEEC-----CC-BCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCE-EEEEEC
T ss_pred CEEEEEEECCCCCCCcccEEEEEEEeCCCCcce-eEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCce-eeEecC
Confidence 78888887532 2223333 3221111000 011111 12357888898888888999999999976554 334443
No 94
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=5.9e-27 Score=258.61 Aligned_cols=270 Identities=19% Similarity=0.249 Sum_probs=185.8
Q ss_pred cccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCC
Q psy11143 135 GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 135 ~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
..++|.+...|. ..+.+|++++|.|.+.+. .+.+.|+|++..+.... ......+.|.|.+++.+|+|.|+|.|.|..
T Consensus 21 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 97 (316)
T 3vh8_G 21 GQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIF-HGRIFQESFNMSPVTTAHAGNYTCRGSHPH 97 (316)
T ss_dssp ---CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHH-HHCCBSSCEEECSCCGGGCEEEEEEEBCSS
T ss_pred CCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceee-cCCcceEEEEECCCCcccCeEEEEEEEcCC
Confidence 345678887776 578899999999999987 67899999988754321 111235689999999999999999998642
Q ss_pred -----cceeeeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEE---eecCeE
Q psy11143 215 -----GEDVAEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTY---EHDGFV 284 (940)
Q Consensus 215 -----g~~s~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~---~~~g~s 284 (940)
+..+..+.|.|.. .+|.+...+... +.+|+.++|.|.+. .+.+.+.|++++..+........ ......
T Consensus 98 ~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3vh8_G 98 SPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKAN 175 (316)
T ss_dssp SSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEE
T ss_pred CCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEE
Confidence 2344556666654 245555544443 88999999999995 45679999999987753321111 113345
Q ss_pred EEEeeeccCCCeEEEEEEEeCCCCc-----eeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEe
Q psy11143 285 LVLNGVRESDAGVYNCVAQNSEGSA-----ESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK 358 (940)
Q Consensus 285 L~I~~v~~~DsG~YtC~A~N~~Gs~-----~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k 358 (940)
|.|.++..+|+|.|+|.|.|..|.. +....|.|... .+|.+...+. ..+.+|++++|.|.+. .|.+.+.|+|
T Consensus 176 L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k 253 (316)
T 3vh8_G 176 FSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSR 253 (316)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEE
T ss_pred EEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEE
Confidence 9999999999999999999998752 34455666542 4566766654 3678999999999997 5778999999
Q ss_pred CCeeeccCCcEEEe----eeceEEEecCCCCCCeEEEEEEEeCCee-----EEEEEEEEEecCC
Q psy11143 359 DEAEFVEDRNHKIH----RTGSLRLYNIGPQDSGLYRCTASNLLGE-----DVAEGYLTVTGEN 413 (940)
Q Consensus 359 ~g~~i~~~~~~~i~----~~~sL~I~~v~~~D~G~YtC~A~N~~G~-----~~~s~~L~V~~~~ 413 (940)
+|..+......... ..++|.|.+++ |+|.|+|.|.|..+. .+..+.|.|.++|
T Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 254 EGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp TTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred CCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 99866432211111 12579999999 999999999998763 3445667776653
No 95
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=5.9e-27 Score=258.64 Aligned_cols=263 Identities=14% Similarity=0.215 Sum_probs=181.5
Q ss_pred EEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEE
Q psy11143 36 GDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 36 ~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~Yt 115 (940)
..++..+..+|.+...|. ..|.+|++++|.|.+.+. .+.+.|+|+|..+... ......+..|.|.+++.+|+|.|+
T Consensus 15 ~~~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~ 90 (316)
T 3vh8_G 15 KGSHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI--FHGRIFQESFNMSPVTTAHAGNYT 90 (316)
T ss_dssp ---------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH--HHHCCBSSCEEECSCCGGGCEEEE
T ss_pred cccccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee--ecCCcceEEEEECCCCcccCeEEE
Confidence 334556667899988888 578899999999999887 5789999999876431 111123455799999999999999
Q ss_pred EEEEeCCC-----ceEEEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEE--
Q psy11143 116 CVAQNSEG-----SAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKI-- 187 (940)
Q Consensus 116 C~a~n~~g-----~~~~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~-- 187 (940)
|.|.+..+ .......|.|.... .|.+...+... +.+|++++|.|.+. .+.+.+.|++++..+........
T Consensus 91 C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~ 168 (316)
T 3vh8_G 91 CRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIH 168 (316)
T ss_dssp EEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEE
T ss_pred EEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeec
Confidence 99986432 22335667776543 45666655544 88999999999995 45668999999887643221111
Q ss_pred --eeeceEEEeecccCCCceEEEEEEcCCcce-----eeeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEeeeCC
Q psy11143 188 --HRTGSLRLYNIGPQDSGLYRCTASNLLGED-----VAEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEGHPL 258 (940)
Q Consensus 188 --~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~-----s~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~ 258 (940)
...+.|.|.+++.+|+|.|+|.|.|..+.. +....|.|.. .+|.+...+. ..+.+|+.++|.|.+. .|.
T Consensus 169 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~ 246 (316)
T 3vh8_G 169 DGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSR-SSY 246 (316)
T ss_dssp TTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-SCCCTTSCCEEEEEES-SCC
T ss_pred CCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-CeecCCCcEEEEEECC-CCC
Confidence 234579999999999999999999987742 4455566653 3455555443 3678999999999997 477
Q ss_pred CeEEEEECCeecCCCCceEEeecC---eEEEEeeeccCCCeEEEEEEEeCCCC
Q psy11143 259 PQMTWFHDGNSLDSDDHVTYEHDG---FVLVLNGVRESDAGVYNCVAQNSEGS 308 (940)
Q Consensus 259 p~ItW~k~g~~l~~~~~~~~~~~g---~sL~I~~v~~~DsG~YtC~A~N~~Gs 308 (940)
+.+.|+|+|..+...........+ ..|.|.+++ |+|.|+|.|.|..+.
T Consensus 247 ~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 247 DMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp SEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred cEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 899999999877533221111122 459999999 999999999997664
No 96
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.94 E-value=4.1e-25 Score=241.47 Aligned_cols=258 Identities=22% Similarity=0.346 Sum_probs=194.8
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC-CeEEEe-ec--eEEEEcccccCCCeEEEEEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD-HVTYEH-DG--FVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~-~~~~~~-~g--s~L~I~~v~~~DsG~YtC~a~ 119 (940)
.+|.|...|....+.+|+.++|.|.+.|.|.+.|.|+|+|..+.... +..+.. .+ ..|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 47899999999999999999999999999999999999999887542 344432 22 368999999999999999999
Q ss_pred eCCCceEEEEEEEEecccC---CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe---eeceE
Q psy11143 120 NSEGSAESVAMIRINGHRA---PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH---RTGSL 193 (940)
Q Consensus 120 n~~g~~~~~~~L~V~~~~~---P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~---~~~sL 193 (940)
|..|.....+.|.|...+. |.....+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+. ....|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l 162 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEE
T ss_pred cCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEE
Confidence 9988877777787764321 12222335677889999999999999999999999999888766665554 23579
Q ss_pred EEee-cccCCCceEEEEEEcCCcceeeeeeeeecCCCC--eee-e---CCCeeEE------ecCCeEEEEEEEeeeCCCe
Q psy11143 194 RLYN-IGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPP--IFI-Q---RPVSTTY------STGSTSRITCLVEGHPLPQ 260 (940)
Q Consensus 194 ~I~~-v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p--~~~-~---~p~~~~v------~~G~~v~L~C~v~G~P~p~ 260 (940)
.|.+ +..+|+|.|+|.|.|..|.....+.|.|...|. ... . ......+ ..|....+.|.+...+.+.
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~ 242 (305)
T 2nzi_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTA 242 (305)
T ss_dssp EETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTS
T ss_pred EEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCC
Confidence 9999 999999999999999999988888888874332 111 0 0111111 1133344555555555556
Q ss_pred EEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeE
Q psy11143 261 MTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESV 312 (940)
Q Consensus 261 ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s 312 (940)
..|.+.+... ...|.|.++...+.|.|+|.|.|..|....+
T Consensus 243 ~~w~~~~~~~-----------~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 243 ERWLRVGQAR-----------ETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp CCEEEEEEES-----------SSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred CccEECcccc-----------CceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 6666554322 3459999999999999999999999877654
No 97
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=238.17 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=193.1
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccC-ceEEee--e--ceEEEeecccCCCceEEEEEE
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR-NHKIHR--T--GSLRLYNIGPQDSGLYRCTAS 211 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~-~~~~~~--~--~sL~I~~v~~~DsG~YtC~a~ 211 (940)
.+|.+...+.+..+.+|++++|.|.+.|.|.+.++|++++..+.... ++.... + ..|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 46788888999999999999999999999999999999998886542 333321 2 279999999999999999999
Q ss_pred cCCcceeeeeeeeecCCCCeee-----eCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeec--CeE
Q psy11143 212 NLLGEDVAEGYLTVTGAPPIFI-----QRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD--GFV 284 (940)
Q Consensus 212 N~~g~~s~s~~L~V~~~~p~~~-----~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~--g~s 284 (940)
|..|..+..+.|.|. .+|.+. ..+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... ...
T Consensus 83 n~~g~~~~~~~l~V~-~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 2nzi_A 83 NQGGSVSGTASLEVE-VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (305)
T ss_dssp ETTEEEEEEEEEEEC-EEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEE
T ss_pred cCCCCccceEEEEEe-cCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceE
Confidence 999988888888887 333322 223567788999999999999999999999999999887776665432 345
Q ss_pred EEEee-eccCCCeEEEEEEEeCCCCceeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEe--------------ecC
Q psy11143 285 LVLNG-VRESDAGVYNCVAQNSEGSAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCK--------------PDG 348 (940)
Q Consensus 285 L~I~~-v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~--------------v~g 348 (940)
|.|.+ +...|.|.|+|.|.|..|....++.+.|.... +|.... .....+..+.|.|. +..
T Consensus 162 l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~----~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~ 237 (305)
T 2nzi_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVK----VSDVSRDSVNLTWTEPASDGGSKITNYIVEK 237 (305)
T ss_dssp EEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEE----EESCCSSCEEEEEECCSCCSBSCEEEEEEEE
T ss_pred EEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCce----eeeccCCEEEEEEcCCccCCCCceeEEEEEE
Confidence 99998 99999999999999999999888888886432 222111 11123445555554 444
Q ss_pred cCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEE
Q psy11143 349 EPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 404 (940)
Q Consensus 349 ~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s 404 (940)
.|.+...|.+.+.. ...+|.|.++...+.|.|+|.|.|..|....+
T Consensus 238 ~~~~~~~w~~~~~~----------~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 238 CATTAERWLRVGQA----------RETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp EETTSCCEEEEEEE----------SSSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred ecCCCCccEECccc----------cCceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 44444445443221 14579999999999999999999999976543
No 98
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=8.2e-24 Score=250.41 Aligned_cols=309 Identities=16% Similarity=0.207 Sum_probs=199.2
Q ss_pred CcccEEEECCCCCCCCeEEEEEEEcCCc-----------e--EEEEEEEEEeC----CCeEEe-CCCcEEEecCCeEEEE
Q psy11143 5 RSSTELVISGVQREHGGRYSCVAGNPAG-----------V--YRGDLHVTVNA----PPIFIQ-RPVSTTYSTGSTSRIT 66 (940)
Q Consensus 5 ~s~~tL~I~~v~~sDsG~Y~C~a~n~~g-----------~--~~~~v~l~V~~----pP~~~~-~p~~~~V~eGesv~L~ 66 (940)
++..+|+|.+++.+|+|.|+|.+.+..+ . ....+.|.|.. +|.+.. .+......+|+.++|.
T Consensus 77 ~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~ 156 (512)
T 1zvo_C 77 RNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLA 156 (512)
T ss_pred CCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEE
Confidence 4468999999999999999999987642 1 11234566652 454442 2222212357899999
Q ss_pred EEeecc-CCC-eEEEEECCEeecCC-CCeEEEeec-----eEEEEcccccCCCeEEEEEEEeCCCceEEEE---------
Q psy11143 67 CLVEGH-PLP-QMTWFHDGNSLDSD-DHVTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVA--------- 129 (940)
Q Consensus 67 C~v~g~-P~p-~V~W~kdg~~I~~~-~~~~~~~~g-----s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~--------- 129 (940)
|.+.+. |.+ .|+|++++...... .......++ +.|.|.....+ .|.|+|.|.|..+......
T Consensus 157 C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~ 235 (512)
T 1zvo_C 157 CLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKA 235 (512)
T ss_pred EEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCc
Confidence 999986 665 99999976432100 000111112 34788887777 9999999999988765543
Q ss_pred --EEEEecc--------------------------------------------------cCCeeE-ecCCceeecCCCcE
Q psy11143 130 --MIRINGH--------------------------------------------------RAPRLV-VKPFDMRAPAGSSV 156 (940)
Q Consensus 130 --~L~V~~~--------------------------------------------------~~P~~~-~~p~~~~v~~Ge~v 156 (940)
.+.|... .+|.+. ..+....+.+|+.+
T Consensus 236 ~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~ 315 (512)
T 1zvo_C 236 QASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKA 315 (512)
T ss_pred CCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCce
Confidence 2333211 123333 33344456789999
Q ss_pred EEEEEeCCCCC--CeEEEeeCCeeccccC---------ceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 157 EIPCKPDGEPL--PRISWSKDEAEFVEDR---------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 157 tL~C~v~g~P~--p~ItW~k~g~~i~~~~---------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
+|.|.+.|.++ ..|+|+++|..+.... ...+...+.|.|..+..+|.|.|+|.|.|..+... ...+..
T Consensus 316 ~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~ 394 (512)
T 1zvo_C 316 TFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALR 394 (512)
T ss_pred EEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEe
Confidence 99999998533 3899999988754210 11122234699999999999999999999877543 222322
Q ss_pred c-----CCCCeeeeCCCeeEEecCCeEE-EEEEEeeeCCC--eEEEEECCeecCCCCce----EEeecCe------EEEE
Q psy11143 226 T-----GAPPIFIQRPVSTTYSTGSTSR-ITCLVEGHPLP--QMTWFHDGNSLDSDDHV----TYEHDGF------VLVL 287 (940)
Q Consensus 226 ~-----~~~p~~~~~p~~~~v~~G~~v~-L~C~v~G~P~p--~ItW~k~g~~l~~~~~~----~~~~~g~------sL~I 287 (940)
. ..+|.+...+... .|+.+. |.|.+.|.+++ .|+|+|+|..+...... ....++. .|.|
T Consensus 395 ~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v 471 (512)
T 1zvo_C 395 EPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRV 471 (512)
T ss_pred ecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEE
Confidence 1 1345444333222 789999 99999996443 68999999998754211 1223342 3566
Q ss_pred eeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.....+|.|.|+|.|.|............+.
T Consensus 472 ~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~ 502 (512)
T 1zvo_C 472 PAPPSPQPATYTCVVSHEDSRTLLNASRSLE 502 (512)
T ss_pred CchhcCCCCeEEEEEEecCCCCceEEEEEEE
Confidence 6666677999999999997765544444444
No 99
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.93 E-value=1.3e-23 Score=237.83 Aligned_cols=264 Identities=21% Similarity=0.362 Sum_probs=200.6
Q ss_pred CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeC--Ceeccc-----cCceEEe---eeceEEEeecccCCCceEEE
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKD--EAEFVE-----DRNHKIH---RTGSLRLYNIGPQDSGLYRC 208 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~--g~~i~~-----~~~~~~~---~~~sL~I~~v~~~DsG~YtC 208 (940)
|.+.. +.+..+.+|+.++|.|.+.|.|.+.|+|+++ +..+.. ..++.+. ..+.|.|.+++.+|+|.|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 44444 5677788999999999999999999999998 777754 3444443 24589999999999999999
Q ss_pred EEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC--ceEEeec--CeE
Q psy11143 209 TASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTYEHD--GFV 284 (940)
Q Consensus 209 ~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~--~~~~~~~--g~s 284 (940)
.|.|..|..+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.++|+++|..+.... ++.+..+ ...
T Consensus 81 ~a~n~~g~~~~~~~l~V~-~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~ 159 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIE-YAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMI 159 (389)
T ss_dssp EEECSSCEEEEEEEEEEE-EEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEE
T ss_pred EEEeCCCCcceEEEEEEE-eCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEE
Confidence 999999999889999998 56666666666678899999999999999999999999999987654 4444433 346
Q ss_pred EEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeec----CcCCC--eEEEE
Q psy11143 285 LVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPD----GEPLP--RISWS 357 (940)
Q Consensus 285 L~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~----g~P~p--~i~W~ 357 (940)
|.|.++...|+|.|+|.|.|..|.......+.+.... +|.... .....+..+.|.|... |.|.. .+.|.
T Consensus 160 L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~----~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~ 235 (389)
T 2jll_A 160 LEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVK----IIELSQTTAKVSFNKPDSHGGVPIHHYQVDVK 235 (389)
T ss_dssp EEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEE----EEEECSSCEEEEEECCSCCTTSCEEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceE----EeeccCCEEEEEEeCCCCCCCcceEEEEEEEE
Confidence 9999999999999999999999998877777664322 221111 1223457889999742 23433 56788
Q ss_pred eCCeeeccCCcEEEe---eeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 358 KDEAEFVEDRNHKIH---RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 358 k~g~~i~~~~~~~i~---~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
+++.... ..+. ...++.|.++...+.|.|+|.|.|..|....+..+.+...
T Consensus 236 ~~~~~~~----~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~ 289 (389)
T 2jll_A 236 EVASEIW----KIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTL 289 (389)
T ss_dssp ETTCSCC----EEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECC
T ss_pred ECCCccc----EEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEec
Confidence 7764211 1111 1247999999999999999999999998766655555543
No 100
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.92 E-value=1e-24 Score=241.85 Aligned_cols=263 Identities=14% Similarity=0.204 Sum_probs=175.9
Q ss_pred CCeeEecCCceeecCC--CcEEEEEEeCCC-C-CCeEEEeeCCeeccccCce--E------EeeeceEEEeecccCCCce
Q psy11143 138 APRLVVKPFDMRAPAG--SSVEIPCKPDGE-P-LPRISWSKDEAEFVEDRNH--K------IHRTGSLRLYNIGPQDSGL 205 (940)
Q Consensus 138 ~P~~~~~p~~~~v~~G--e~vtL~C~v~g~-P-~p~ItW~k~g~~i~~~~~~--~------~~~~~sL~I~~v~~~DsG~ 205 (940)
+|.+.+.+.......| +++.|.|.+.+. | .+.|+|+++|..+...... . ....+.|.|.++..+|+|.
T Consensus 7 ~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 86 (323)
T 2wqr_A 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRT 86 (323)
T ss_dssp CCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCC
T ss_pred CCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCc
Confidence 3444444333333344 699999999885 4 4699999999887643211 1 1122357788888889999
Q ss_pred EEEEEEcCCcceeeeeeeee---cCCCCeeeeCCCeeEEecCCeEEEEEEEeee-CCC---eEEEEECC-eecCCCCceE
Q psy11143 206 YRCTASNLLGEDVAEGYLTV---TGAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP---QMTWFHDG-NSLDSDDHVT 277 (940)
Q Consensus 206 YtC~a~N~~g~~s~s~~L~V---~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p---~ItW~k~g-~~l~~~~~~~ 277 (940)
|+|.|.|..+.....+.+.+ ...++.+...+....+.+|+.++|.|.+.|. |.+ .|+|++++ ..+.......
T Consensus 87 Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~ 166 (323)
T 2wqr_A 87 YTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKE 166 (323)
T ss_dssp EEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEE
T ss_pred EEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCC
Confidence 99999998776554433211 1122333444555567889999999999986 556 99999975 4443222111
Q ss_pred E-eec-----CeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecCc
Q psy11143 278 Y-EHD-----GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE 349 (940)
Q Consensus 278 ~-~~~-----g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~ 349 (940)
. ..+ ...|.|.++..+|+|.|+|.|.|..+.......+.+. ...+|.+...+.......|+.++|.|.+.|.
T Consensus 167 ~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 246 (323)
T 2wqr_A 167 EKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNF 246 (323)
T ss_dssp EECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeee
Confidence 1 111 2259999999999999999999987544333333222 2357776654433333349999999999984
Q ss_pred -CCC-eEEEEeCCeeeccCCcE----------EEeeeceEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 350 -PLP-RISWSKDEAEFVEDRNH----------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 350 -P~p-~i~W~k~g~~i~~~~~~----------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
|.+ .|.|+|+|..+...... .....+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 247 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 247 MPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp BSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 544 89999999987543211 0112347999999999999999999998876
No 101
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=3.2e-23 Score=210.60 Aligned_cols=183 Identities=28% Similarity=0.480 Sum_probs=157.7
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC--ceEE--eecCeEEEEeeeccCCCeEEEEEEE
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTY--EHDGFVLVLNGVRESDAGVYNCVAQ 303 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~--~~~~--~~~g~sL~I~~v~~~DsG~YtC~A~ 303 (940)
.+|.+...+....+.+|+.++|.|.+.|.|.+.+.|+++|..+.... +..+ .....+|.|.++..+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 45677778888899999999999999999999999999999887553 3333 2333469999999999999999999
Q ss_pred eCCCCceeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEE
Q psy11143 304 NSEGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRL 379 (940)
Q Consensus 304 N~~Gs~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I 379 (940)
|..|.......+.|... .+|.+...+....+..|+.++|.|.+.|.|.|.+.|++++..+....++.+..++ +|.|
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLI 163 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEE
Confidence 99998887777777642 5677777777888999999999999999999999999999999877777776655 7999
Q ss_pred ecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 380 YNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 380 ~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 164 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 164 AEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999999999999999999999998874
No 102
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.91 E-value=1.7e-24 Score=240.06 Aligned_cols=264 Identities=18% Similarity=0.249 Sum_probs=172.1
Q ss_pred CCeEEeCCCcEEEecC--CeEEEEEEeecc-C-CCeEEEEECCEeecCCCCe--EEEeec-----eEEEEcccccCCCeE
Q psy11143 45 PPIFIQRPVSTTYSTG--STSRITCLVEGH-P-LPQMTWFHDGNSLDSDDHV--TYEHDG-----FVLVLNGVRESDAGV 113 (940)
Q Consensus 45 pP~~~~~p~~~~V~eG--esv~L~C~v~g~-P-~p~V~W~kdg~~I~~~~~~--~~~~~g-----s~L~I~~v~~~DsG~ 113 (940)
+|.+...+.......| +.++|.|.+.+. | .+.|+|+|+|..+...... ....++ +.|.|.++..+|+|.
T Consensus 7 ~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 86 (323)
T 2wqr_A 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRT 86 (323)
T ss_dssp CCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCC
T ss_pred CCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCc
Confidence 4544443332222334 699999999885 4 4699999999988643211 111122 246788888889999
Q ss_pred EEEEEEeCCCceEEEEEEEEe-cccCCee-EecCCceeecCCCcEEEEEEeCCC-CCC---eEEEeeCC-eeccccCc--
Q psy11143 114 YNCVAQNSEGSAESVAMIRIN-GHRAPRL-VVKPFDMRAPAGSSVEIPCKPDGE-PLP---RISWSKDE-AEFVEDRN-- 184 (940)
Q Consensus 114 YtC~a~n~~g~~~~~~~L~V~-~~~~P~~-~~~p~~~~v~~Ge~vtL~C~v~g~-P~p---~ItW~k~g-~~i~~~~~-- 184 (940)
|+|.|.|..+.....+.+.+. ....|.+ ...+....+.+|++++|.|.+.+. |.+ .|+|++++ ..+.....
T Consensus 87 Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~ 166 (323)
T 2wqr_A 87 YTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKE 166 (323)
T ss_dssp EEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEE
T ss_pred EEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCC
Confidence 999999987654433221111 1122333 444555568899999999999874 556 89999964 43322111
Q ss_pred -----eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeee---cCCCCeeeeCCCeeEEecCCeEEEEEEEeee
Q psy11143 185 -----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV---TGAPPIFIQRPVSTTYSTGSTSRITCLVEGH 256 (940)
Q Consensus 185 -----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V---~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~ 256 (940)
......+.|.|.+++.+|+|.|+|.|.|..+.......+.+ ...+|.+...+.......|+.++|.|.+.|.
T Consensus 167 ~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 246 (323)
T 2wqr_A 167 EKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNF 246 (323)
T ss_dssp EECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeee
Confidence 11223457999999999999999999998644333333322 1134554433222222349999999999984
Q ss_pred -CCC-eEEEEECCeecCCCCce----EEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCC
Q psy11143 257 -PLP-QMTWFHDGNSLDSDDHV----TYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGS 308 (940)
Q Consensus 257 -P~p-~ItW~k~g~~l~~~~~~----~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs 308 (940)
|.+ .|+|+|+|..+...... ....++ ..|.|..+..+|+|.|+|.|.|..+.
T Consensus 247 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 247 MPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp BSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 443 89999999988653211 111122 34899999999999999999999876
No 103
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=8.9e-24 Score=236.48 Aligned_cols=259 Identities=16% Similarity=0.284 Sum_probs=174.1
Q ss_pred eCCCcEEEecCCeEEEEEEeecc--CCCeEEEEEC--CEeec-----------------CCCCeEEEee----ceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kd--g~~I~-----------------~~~~~~~~~~----gs~L~I~ 104 (940)
.+|..+.+.+|++++|.|.+.+. +.+.|.|+|+ +..+. ...++.+..+ ...|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 34566789999999999999886 3679999997 33220 1234444432 2468999
Q ss_pred ccccCCCeEEEEEEEeCCCceEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC-CeEEEeeCCeecc
Q psy11143 105 GVRESDAGVYNCVAQNSEGSAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFV 180 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p~ItW~k~g~~i~ 180 (940)
+++.+|+|.|+|.+.|..+.....+.|.|... .+|.+...+....+.+|+.++|.|.+.|. |. +.|+|++++..+.
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 164 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG 164 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTT
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCc
Confidence 99999999999999985543334566777632 23555554444567899999999999986 65 6999999887532
Q ss_pred cc-------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeee--e---------------------cCCCC
Q psy11143 181 ED-------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT--V---------------------TGAPP 230 (940)
Q Consensus 181 ~~-------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~--V---------------------~~~~p 230 (940)
.. ........+.|.|.++..+| |.|+|.|.|..+.......+. | ...+|
T Consensus 165 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P 243 (344)
T 1za6_B 165 VHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREP 243 (344)
T ss_dssp EEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCC
T ss_pred eeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCC
Confidence 10 11112233479999998888 999999999887643332222 1 12345
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeee-C-CCeEEEEECCeecCCCCc--eEEeecCe-----EEEEeeeccCCCeEEEEE
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGH-P-LPQMTWFHDGNSLDSDDH--VTYEHDGF-----VLVLNGVRESDAGVYNCV 301 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~-P-~p~ItW~k~g~~l~~~~~--~~~~~~g~-----sL~I~~v~~~DsG~YtC~ 301 (940)
.+...+.......|..++|.|.+.|. | .+.|+|+|+|..+..... .....++. .|.|.....+|.|.|+|.
T Consensus 244 ~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~ 323 (344)
T 1za6_B 244 QVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCS 323 (344)
T ss_dssp EEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEE
T ss_pred EEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEE
Confidence 54433322223356679999999996 4 358999999988764322 12233332 255555556779999999
Q ss_pred EEeCCCCc
Q psy11143 302 AQNSEGSA 309 (940)
Q Consensus 302 A~N~~Gs~ 309 (940)
|.|.....
T Consensus 324 a~~~~l~~ 331 (344)
T 1za6_B 324 VMHEALHN 331 (344)
T ss_dssp EECTTSTT
T ss_pred EEcCCCCC
Confidence 99987654
No 104
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=7.2e-24 Score=237.24 Aligned_cols=257 Identities=17% Similarity=0.268 Sum_probs=173.4
Q ss_pred ecCCceeecCCCcEEEEEEeCCC--CCCeEEEeeC--Ceecc-----------------ccCceEEee-----eceEEEe
Q psy11143 143 VKPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKD--EAEFV-----------------EDRNHKIHR-----TGSLRLY 196 (940)
Q Consensus 143 ~~p~~~~v~~Ge~vtL~C~v~g~--P~p~ItW~k~--g~~i~-----------------~~~~~~~~~-----~~sL~I~ 196 (940)
..+....+.+|++++|.|.+.+. +.+.|.|+|+ +..+. ...++.+.. ..+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 34556789999999999999876 3678999986 33221 123454443 2479999
Q ss_pred ecccCCCceEEEEEEcCCcceeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEeee-CC-CeEEEEECCeecC
Q psy11143 197 NIGPQDSGLYRCTASNLLGEDVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEGH-PL-PQMTWFHDGNSLD 271 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~-p~ItW~k~g~~l~ 271 (940)
+++.+|+|.|+|.+.|..+.......|.|.. .+|.+...+....+.+|+.++|.|.+.|. |. +.|+|++++..+.
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 164 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG 164 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTT
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCc
Confidence 9999999999999998655444556677763 23444433333446789999999999997 65 6999999987642
Q ss_pred CCCc-eEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEE----------------------eeccCC
Q psy11143 272 SDDH-VTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRI----------------------NGHRAP 323 (940)
Q Consensus 272 ~~~~-~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V----------------------~~~~~P 323 (940)
.... .....++ ..|.|..+..+| |.|+|.|.|..+.......+.+ ....+|
T Consensus 165 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P 243 (344)
T 1za6_B 165 VHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREP 243 (344)
T ss_dssp EEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCC
T ss_pred eeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCC
Confidence 1100 0011111 248898888878 9999999999887544333321 123567
Q ss_pred eEEEcCCceeecCCCeEEEEEeecCc-C-CCeEEEEeCCeeeccCCc--EEEeee------ceEEEecCCCCCCeEEEEE
Q psy11143 324 RLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWSKDEAEFVEDRN--HKIHRT------GSLRLYNIGPQDSGLYRCT 393 (940)
Q Consensus 324 ~i~~~p~~~~v~~G~~vtL~C~v~g~-P-~p~i~W~k~g~~i~~~~~--~~i~~~------~sL~I~~v~~~D~G~YtC~ 393 (940)
.+...+.......|..++|.|.+.|. | .+.|+|+|+|..+..... .....+ +.|.|.....+|.|.|+|.
T Consensus 244 ~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~ 323 (344)
T 1za6_B 244 QVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCS 323 (344)
T ss_dssp EEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEE
T ss_pred EEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEE
Confidence 76655433323346679999999995 4 359999999987653211 111222 3466666666779999999
Q ss_pred EEeCCee
Q psy11143 394 ASNLLGE 400 (940)
Q Consensus 394 A~N~~G~ 400 (940)
|.|....
T Consensus 324 a~~~~l~ 330 (344)
T 1za6_B 324 VMHEALH 330 (344)
T ss_dssp EECTTST
T ss_pred EEcCCCC
Confidence 9997653
No 105
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=99.91 E-value=4.3e-26 Score=208.52 Aligned_cols=55 Identities=42% Similarity=0.564 Sum_probs=52.2
Q ss_pred cccccccccCCcccCCCCCcccccchhhhccccccccCCCcCCCcCCCCCCCCCC
Q psy11143 664 CFHTKYRTIDGTCNNLQHPMWGASLTGFRRLLKPIYENGFSTPVAPILSSPMAGN 718 (940)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (940)
|++.+|||+||+|||++||.||++.|+|+|+|||.|+||+++|.||+..+.++|.
T Consensus 2 ~~~~~yRt~DG~cNNl~~P~~G~a~t~f~R~lpp~Y~DG~~~p~~~~~~~~~~g~ 56 (104)
T 1d2v_A 2 PEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGF 56 (104)
T ss_dssp CSCCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTB
T ss_pred CCCCCccCCCCCccCCCCCccCcCCCccccccCcccccCcccccccccccccCCC
Confidence 6899999999999999999999999999999999999999999999998877764
No 106
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.90 E-value=4.2e-23 Score=209.38 Aligned_cols=184 Identities=27% Similarity=0.532 Sum_probs=158.1
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCC-CCceEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS-DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~-~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
.+|.+...+....+.+|+++.|.|.+.|.|.+.+.|++++..+.. ..++.+..++.+|.|.++..+|+|.|+|.+.|..
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 85 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGV 85 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCC
Confidence 345666677778899999999999999999999999999998865 4566777777789999999999999999999998
Q ss_pred CCc-eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCC
Q psy11143 307 GSA-ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQ 385 (940)
Q Consensus 307 Gs~-~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~ 385 (940)
|.. .....+.|. .+|.+...+....+..|+.++|.|.+.|.|.|.+.|++++..+....++.+..+++|.|.++..+
T Consensus 86 ~~~~~~~~~l~v~--~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 163 (192)
T 2iep_A 86 GGAVESCGALQVK--MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKE 163 (192)
T ss_dssp SCCEEEEEEEEEE--EEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGG
T ss_pred CceeEeEEEEEEE--eCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChh
Confidence 874 444555554 57888888888889999999999999999999999999999998888888877889999999999
Q ss_pred CCeEEEEEEEeCCeeEE-EEEEEEEecCC
Q psy11143 386 DSGLYRCTASNLLGEDV-AEGYLTVTGEN 413 (940)
Q Consensus 386 D~G~YtC~A~N~~G~~~-~s~~L~V~~~~ 413 (940)
|+|.|+|.|.|..|... ..+.|.|..+|
T Consensus 164 d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 164 DAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred hCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999884 46888888753
No 107
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.90 E-value=2.2e-22 Score=208.44 Aligned_cols=187 Identities=26% Similarity=0.483 Sum_probs=156.6
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecC-CCCceEEee--cC-eEEEEeeecc-CCCeEEEEEE
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD-SDDHVTYEH--DG-FVLVLNGVRE-SDAGVYNCVA 302 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~-~~~~~~~~~--~g-~sL~I~~v~~-~DsG~YtC~A 302 (940)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+. ...++.+.. ++ .+|.|.++.. +|+|.|+|.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 57888888999999999999999999999999999999999987 444554432 23 4699999999 9999999999
Q ss_pred EeCCCC-ceeEEEEEEeec-----cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeece
Q psy11143 303 QNSEGS-AESVAMIRINGH-----RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGS 376 (940)
Q Consensus 303 ~N~~Gs-~~~s~~l~V~~~-----~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~s 376 (940)
.|..|. ....+.|.|... .+|.+...+....+..|+.++|.|.+.|.|.|.|.|++++..+..........+++
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 164 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGF 164 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTE
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCe
Confidence 999998 667777777642 12788888888889999999999999999999999999999887643333345679
Q ss_pred EEEecCCCCCCeEEEEEEEeCCeeEEEE-EEEEEecCCC
Q psy11143 377 LRLYNIGPQDSGLYRCTASNLLGEDVAE-GYLTVTGENS 414 (940)
Q Consensus 377 L~I~~v~~~D~G~YtC~A~N~~G~~~~s-~~L~V~~~~~ 414 (940)
|.|.++..+|+|.|+|.|.|..|..... +.|.|+....
T Consensus 165 L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 165 LQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred EEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 9999999999999999999999999875 8999998643
No 108
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.89 E-value=4.2e-22 Score=202.31 Aligned_cols=182 Identities=23% Similarity=0.426 Sum_probs=156.1
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCe--EEEEeeeccCCCeEEEEEEEeC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGF--VLVLNGVRESDAGVYNCVAQNS 305 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~--sL~I~~v~~~DsG~YtC~A~N~ 305 (940)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+..++. +|.|.++..+|+|.|+|.+.|.
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 85 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNE 85 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECS
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECC
Confidence 56777788888999999999999999999999999999999998887777766653 5999999999999999999999
Q ss_pred CCCceeEEEEEEeeccCCeEEE---cCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeee---ceEEE
Q psy11143 306 EGSAESVAMIRINGHRAPRLVV---KPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT---GSLRL 379 (940)
Q Consensus 306 ~Gs~~~s~~l~V~~~~~P~i~~---~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~---~sL~I 379 (940)
.|.......+.|.. +|.+.. .+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... ++|.|
T Consensus 86 ~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (197)
T 3lcy_A 86 VGEVETSSKLLLQA--TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVM 163 (197)
T ss_dssp SCEEEEEEEEEEEE--EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEE
T ss_pred CCceeEEEEEEEEc--CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEE
Confidence 99888777777753 343332 12345678999999999999999999999999999987777776654 57999
Q ss_pred ecCCC-CCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 380 YNIGP-QDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 380 ~~v~~-~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
.++.. +|+|.|+|.|.|..|....++.|.|.+
T Consensus 164 ~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 164 KNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 99985 899999999999999999999999875
No 109
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.89 E-value=2.1e-22 Score=204.53 Aligned_cols=183 Identities=28% Similarity=0.480 Sum_probs=155.6
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC--CeEEE--eeceEEEEcccccCCCeEEEEEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTYE--HDGFVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~--~~~~~--~~gs~L~I~~v~~~DsG~YtC~a~ 119 (940)
.+|.+...|....+.+|+.++|.|.+.+.|.+.|.|+|+|..+.... +.++. .....|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 36788888899999999999999999999999999999999887553 33433 334568999999999999999999
Q ss_pred eCCCceEEEEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeec---eEEE
Q psy11143 120 NSEGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRL 195 (940)
Q Consensus 120 n~~g~~~~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~---sL~I 195 (940)
|..|.......|.|... .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.....+ +|.|
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLI 163 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEE
Confidence 99888777777888753 3456677777888999999999999999999999999999998877666665544 6999
Q ss_pred eecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 196 YNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 196 ~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 164 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 164 AEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999999999999999998888887763
No 110
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.89 E-value=9.7e-22 Score=203.79 Aligned_cols=185 Identities=26% Similarity=0.477 Sum_probs=151.8
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEee---cCeEEEEeee-ccCCCeEEEEEEE
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH---DGFVLVLNGV-RESDAGVYNCVAQ 303 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~---~g~sL~I~~v-~~~DsG~YtC~A~ 303 (940)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.|.|++++..+.......... .+..|.|.++ ..+|+|.|+|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 46777788888999999999999999999999999999999987654333321 3456999999 4999999999999
Q ss_pred eCCCCceeEEEEEEeec-----cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccC---CcEEEee--
Q psy11143 304 NSEGSAESVAMIRINGH-----RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVED---RNHKIHR-- 373 (940)
Q Consensus 304 N~~Gs~~~s~~l~V~~~-----~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~---~~~~i~~-- 373 (940)
|..|.....+.|.|... ..|.+...+....+..|++++|.|.+.|.|.|.|.|++++..+... .++....
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~ 164 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSE 164 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEET
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecC
Confidence 99998877888888642 2377888888888999999999999999999999999999988653 3444433
Q ss_pred -eceEEEecCCCCCCeEEEEEEEeCCeeEEE-EEEEEEecC
Q psy11143 374 -TGSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTGE 412 (940)
Q Consensus 374 -~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~~L~V~~~ 412 (940)
.+.|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..+
T Consensus 165 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 165 SIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 368999999999999999999999998765 577888765
No 111
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.89 E-value=7.5e-22 Score=204.43 Aligned_cols=184 Identities=27% Similarity=0.489 Sum_probs=155.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeec-CCCCeEEE--eec-eEEEEccccc-CCCeEEEEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD-SDDHVTYE--HDG-FVLVLNGVRE-SDAGVYNCVA 118 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~-~~~~~~~~--~~g-s~L~I~~v~~-~DsG~YtC~a 118 (940)
.||.+...|....+.+|+.++|.|.+.|.|.+.|.|+++|..+. ...+..+. .++ ..|.|.+++. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 58999999999999999999999999999999999999999986 34444444 223 5689999999 9999999999
Q ss_pred EeCCCc-eEEEEEEEEeccc-----CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeece
Q psy11143 119 QNSEGS-AESVAMIRINGHR-----APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGS 192 (940)
Q Consensus 119 ~n~~g~-~~~~~~L~V~~~~-----~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~s 192 (940)
.|..|. ....+.|.|.... .|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+..........++.
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 164 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGF 164 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTE
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCe
Confidence 999988 5667788887542 2677777888889999999999999999999999999999887644433445679
Q ss_pred EEEeecccCCCceEEEEEEcCCcceeee-eeeeecC
Q psy11143 193 LRLYNIGPQDSGLYRCTASNLLGEDVAE-GYLTVTG 227 (940)
Q Consensus 193 L~I~~v~~~DsG~YtC~a~N~~g~~s~s-~~L~V~~ 227 (940)
|.|.+++.+|+|.|+|.|.|..|..... +.|.|..
T Consensus 165 L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 165 LQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 9999999999999999999999988664 7888874
No 112
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.89 E-value=5.8e-22 Score=201.98 Aligned_cols=182 Identities=25% Similarity=0.407 Sum_probs=151.6
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCC-CceEEee-cC--eEEEEeeeccCCCeEEEEEEE
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD-DHVTYEH-DG--FVLVLNGVRESDAGVYNCVAQ 303 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~-~~~~~~~-~g--~sL~I~~v~~~DsG~YtC~A~ 303 (940)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.. .+ ..|.|.++..+|+|.|+|.|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 4678888888899999999999999999999999999999988754 3444432 22 269999999999999999999
Q ss_pred eCCCCceeEEEEEEeeccCCeEEE-----cCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee---ec
Q psy11143 304 NSEGSAESVAMIRINGHRAPRLVV-----KPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR---TG 375 (940)
Q Consensus 304 N~~Gs~~~s~~l~V~~~~~P~i~~-----~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~---~~ 375 (940)
|..|.....+.|.|.. +|.+.. .+....+.+|+.++|.|.+.|.|.|.+.|++++..+....++.+.. .+
T Consensus 83 n~~g~~~~~~~l~V~~--~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~ 160 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEV--PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFT 160 (197)
T ss_dssp ETTEEEEEEEEEEEEE--EEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEE
T ss_pred ECCCceeEEEEEEEcC--CCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCce
Confidence 9998887777777753 343322 2234578899999999999999999999999999988777766643 45
Q ss_pred eEEEec-CCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 376 SLRLYN-IGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 376 sL~I~~-v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
+|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 161 ~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 899999 999999999999999999999999998863
No 113
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=7.6e-22 Score=199.25 Aligned_cols=182 Identities=22% Similarity=0.429 Sum_probs=147.2
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCC--CCceEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS--DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~--~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++....++. |.|.++..+|+|.|+|.+.|..
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~-L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN-LQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSC-EEETTCCGGGCEEEEEEEEETT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCC-EEEeeCCHhHCcEEEEEEEEcC
Confidence 46677788889999999999999999999999999999988763 34555555554 9999999999999999999998
Q ss_pred CCceeEEEEEEeeccCCeEEEcCC--ceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee-eceEEEecCC
Q psy11143 307 GSAESVAMIRINGHRAPRLVVKPF--DMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR-TGSLRLYNIG 383 (940)
Q Consensus 307 Gs~~~s~~l~V~~~~~P~i~~~p~--~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~-~~sL~I~~v~ 383 (940)
+.......+.+.+..+|.+...+. ...+.+|+.++|.|.+.|.|.|.+.|+++|..+....++.+.. .++|.|.++.
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 160 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 160 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCC
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCC
Confidence 766544445555556677665544 3567889999999999999999999999999988777666544 4589999999
Q ss_pred CCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 384 PQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 384 ~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
.+|+|.|+|.|.|..|....++.|.|..
T Consensus 161 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 161 NSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999999999999999999999998863
No 114
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=2.6e-21 Score=196.52 Aligned_cols=175 Identities=21% Similarity=0.339 Sum_probs=146.1
Q ss_pred CCeeeeCCCeeEEec-CCeEEEEEEEeeeCC--CeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeC
Q psy11143 229 PPIFIQRPVSTTYST-GSTSRITCLVEGHPL--PQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 305 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~-G~~v~L~C~v~G~P~--p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~ 305 (940)
+|.+.. +....+.+ |+.+.|.|.+.+.|. +.+.|++++..+....... .+..|.|.++..+|+|.|+|.|.|.
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~ 78 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA---SNMEYRINKPRAEDSGEYHCVYHFV 78 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC---SEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe---ccEEEEEecCCcccCEEEEEEEEeC
Confidence 455555 44455666 999999999999887 7999999999987654432 3356999999999999999999999
Q ss_pred CCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEe--CCeeec---cCCcEEEeee---ceE
Q psy11143 306 EGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK--DEAEFV---EDRNHKIHRT---GSL 377 (940)
Q Consensus 306 ~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k--~g~~i~---~~~~~~i~~~---~sL 377 (940)
+.....+.|.|. .+|.+...+....+.+|+.++|.|.+.|.|.|.+.|++ ++..+. ...++.+... ++|
T Consensus 79 -~~~~~~~~l~V~--~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L 155 (190)
T 2wv3_A 79 -SAPKANATIEVK--AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTEL 155 (190)
T ss_dssp -TEEEEEEEEEEE--CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEE
T ss_pred -CcccccEEEEEe--cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEE
Confidence 777777777665 57888888888889999999999999999999999999 777664 4456665543 379
Q ss_pred EEecCC-CCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 378 RLYNIG-PQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 378 ~I~~v~-~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
.|.++. .+|+|.|+|.|.|..|....++.|.|+
T Consensus 156 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 156 NIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999 799999999999999999999999886
No 115
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.88 E-value=2.4e-22 Score=203.68 Aligned_cols=183 Identities=27% Similarity=0.547 Sum_probs=155.6
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC-CCCeEEEeeceEEEEcccccCCCeEEEEEEEe
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS-DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~-~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
+..+|.+...+..+.+.+|+.++|.|.+.+.|.+.|.|++++..+.. ..+..+..++..|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 34567788888889999999999999999999999999999998865 44566666777789999999999999999999
Q ss_pred CCCce-EEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecc
Q psy11143 121 SEGSA-ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 199 (940)
Q Consensus 121 ~~g~~-~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~ 199 (940)
..|.. .....+.|.. .|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.....++.|.|.+++
T Consensus 84 ~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~ 161 (192)
T 2iep_A 84 GVGGAVESCGALQVKM--KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQ 161 (192)
T ss_dssp SSSCCEEEEEEEEEEE--EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCC
T ss_pred CCCceeEeEEEEEEEe--CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCC
Confidence 88874 3456666654 45677777788899999999999999999999999999999887777777777889999999
Q ss_pred cCCCceEEEEEEcCCcce-eeeeeeeec
Q psy11143 200 PQDSGLYRCTASNLLGED-VAEGYLTVT 226 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g~~-s~s~~L~V~ 226 (940)
.+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 162 ~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 162 KEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred hhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 999999999999999887 445777776
No 116
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.88 E-value=1.6e-21 Score=202.09 Aligned_cols=184 Identities=26% Similarity=0.471 Sum_probs=150.2
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE---eeceEEEEccc-ccCCCeEEEEEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE---HDGFVLVLNGV-RESDAGVYNCVA 118 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~---~~gs~L~I~~v-~~~DsG~YtC~a 118 (940)
..+|.|...|.+..+.+|+.+.|.|.+.|.|.+.|.|+|++..+......... ..+..|.|.++ +.+|+|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 45788999999999999999999999999999999999999998754433322 23456899999 599999999999
Q ss_pred EeCCCceEEEEEEEEeccc-----CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeecccc---CceEEee-
Q psy11143 119 QNSEGSAESVAMIRINGHR-----APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVED---RNHKIHR- 189 (940)
Q Consensus 119 ~n~~g~~~~~~~L~V~~~~-----~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~---~~~~~~~- 189 (940)
.|..|.....+.|.|.... .|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... .+.....
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~ 163 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS 163 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEec
Confidence 9999987778888887532 267777778888999999999999999999999999999888653 2333332
Q ss_pred --eceEEEeecccCCCceEEEEEEcCCccee-eeeeeeec
Q psy11143 190 --TGSLRLYNIGPQDSGLYRCTASNLLGEDV-AEGYLTVT 226 (940)
Q Consensus 190 --~~sL~I~~v~~~DsG~YtC~a~N~~g~~s-~s~~L~V~ 226 (940)
.+.|.|.+++.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 164 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 164 ESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 36899999999999999999999999864 45666666
No 117
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=199.13 Aligned_cols=182 Identities=22% Similarity=0.409 Sum_probs=153.7
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeece--EEEEcccccCCCeEEEEEEEe
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGF--VLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs--~L~I~~v~~~DsG~YtC~a~n 120 (940)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.......+..++. .|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 457888899999999999999999999999999999999999998777777665443 689999999999999999999
Q ss_pred CCCceEEEEEEEEecccCCeeE---ecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeee---ceEE
Q psy11143 121 SEGSAESVAMIRINGHRAPRLV---VKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT---GSLR 194 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~~~~P~~~---~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~---~sL~ 194 (940)
..+.......+.|...+ .+. ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+...... ..|.
T Consensus 85 ~~~~~~~~~~l~v~~~p--~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 162 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATP--QFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLV 162 (197)
T ss_dssp SSCEEEEEEEEEEEEEE--EECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEE
T ss_pred CCCceeEEEEEEEEcCC--CCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEE
Confidence 99888777777776532 222 123455778999999999999999999999999999887766665544 5799
Q ss_pred Eeeccc-CCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 195 LYNIGP-QDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 195 I~~v~~-~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
|.++.. +|+|.|+|.|.|..|..+..+.|.|.
T Consensus 163 i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 163 MKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp ESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 999985 89999999999999999888888876
No 118
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.88 E-value=8.5e-22 Score=202.72 Aligned_cols=194 Identities=28% Similarity=0.527 Sum_probs=149.6
Q ss_pred eeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCc-----eEEeecCeE----EEEeeeccC
Q psy11143 223 LTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH-----VTYEHDGFV----LVLNGVRES 293 (940)
Q Consensus 223 L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~-----~~~~~~g~s----L~I~~v~~~ 293 (940)
|.+...+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .....++.. |.|.++...
T Consensus 3 l~~~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 82 (212)
T 2v9r_A 3 LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRP 82 (212)
T ss_dssp ---CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCC
T ss_pred cCcccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcc
Confidence 44555678888888889999999999999999999999999999998864421 222233331 344567899
Q ss_pred CCeEEEEEEEeCCCCc-eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeCCeeeccCCcEEE
Q psy11143 294 DAGVYNCVAQNSEGSA-ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRNHKI 371 (940)
Q Consensus 294 DsG~YtC~A~N~~Gs~-~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~g~~i~~~~~~~i 371 (940)
|+|.|+|.|.|..|.. ...+.+.|.. .+|.+...+....+..|+.++|.|.+ .+.|.|.|.|++++..+........
T Consensus 83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~-~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~ 161 (212)
T 2v9r_A 83 DEGVYVCVARNYLGEAVSHDASLEVAI-LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT 161 (212)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEECE-ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEE
T ss_pred cCeEEEEEEECCCCceeecceEEEEEe-ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEE
Confidence 9999999999998765 3456666654 34555566677789999999999998 8999999999999999876554444
Q ss_pred eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEE-EEEEEecCCCCCC
Q psy11143 372 HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE-GYLTVTGENSVEP 417 (940)
Q Consensus 372 ~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s-~~L~V~~~~~~~~ 417 (940)
..+++|.|.++..+|+|.|+|.|.|..|..... +.|.|..+|....
T Consensus 162 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 162 IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVK 208 (212)
T ss_dssp EETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred ccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhh
Confidence 567799999999999999999999999987664 8999998776443
No 119
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.88 E-value=2.7e-21 Score=197.09 Aligned_cols=175 Identities=22% Similarity=0.422 Sum_probs=146.9
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEe-eeCCCeEEEEECCeecCCCC--ceEEeec---------CeEEEEeeeccCCCe
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDSDD--HVTYEHD---------GFVLVLNGVRESDAG 296 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~-G~P~p~ItW~k~g~~l~~~~--~~~~~~~---------g~sL~I~~v~~~DsG 296 (940)
+|.+...|....+.+|+++.|.|.+. |.|.+.+.|+++|..+.... +..+... ..+|.|.++..+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 56778888999999999999999999 99999999999999988663 2333222 246999999999999
Q ss_pred EEEEEEEeCCCCceeE-EEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCC-eEEEEeCCeeeccCCcEEEeee
Q psy11143 297 VYNCVAQNSEGSAESV-AMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRT 374 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~~s-~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p-~i~W~k~g~~i~~~~~~~i~~~ 374 (940)
.|+|.|.|..|..... +.|.| ..+|.+...+....+.+|+.++|.|.+.|.|.| .|.|++++..+...... ...
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V--~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--~~~ 157 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGL--EGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--GPQ 157 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEE--CCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--SCC
T ss_pred EEEEEEEeCCCceecccEEEEE--ecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--CCC
Confidence 9999999987764332 55555 467889888888899999999999999999999 99999999988655443 456
Q ss_pred ceEEEecCCCCCCeEEEEEEEeCCeeEE-EEEEEEE
Q psy11143 375 GSLRLYNIGPQDSGLYRCTASNLLGEDV-AEGYLTV 409 (940)
Q Consensus 375 ~sL~I~~v~~~D~G~YtC~A~N~~G~~~-~s~~L~V 409 (940)
++|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 158 ~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 158 RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 689999987 78999999999999986 6888988
No 120
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=3.1e-21 Score=195.48 Aligned_cols=176 Identities=22% Similarity=0.444 Sum_probs=145.9
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEE-CCeecCCCCceEEeecC--eEEEEeeeccCCCeEEEEEEEeCCCC
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH-DGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGS 308 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k-~g~~l~~~~~~~~~~~g--~sL~I~~v~~~DsG~YtC~A~N~~Gs 308 (940)
+...+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+..++ .+|.|.++..+|+|.|+|.+.|..|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 455677888999999999999999887 999999 78888877777776655 46999999999999999999999887
Q ss_pred c-eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeec--cCCcEEEeeeceEEEecCCCC
Q psy11143 309 A-ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV--EDRNHKIHRTGSLRLYNIGPQ 385 (940)
Q Consensus 309 ~-~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~--~~~~~~i~~~~sL~I~~v~~~ 385 (940)
. ...+.|.| ..+|.+...+....+.+|++++|.|.+.|.|.|.++|++++..+. ...++.+..+++|.|.++..+
T Consensus 84 ~~~~~~~l~v--~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 161 (189)
T 2v44_A 84 TQEATVVLEI--YQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKS 161 (189)
T ss_dssp EEEEEEEEEE--ECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGG
T ss_pred cEEEEEEEEE--ecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcc
Confidence 6 34444554 467888777777889999999999999999999999999998775 356777777889999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 386 DSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 386 D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
|+|.|+|.|.|..|.......+.|.
T Consensus 162 d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 162 DEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp GCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cCeEEEEEEEccccCceeeeeEEEE
Confidence 9999999999999776655555443
No 121
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=204.13 Aligned_cols=172 Identities=17% Similarity=0.284 Sum_probs=139.5
Q ss_pred CCeeEEecCCeEEEEEEEee-eCCCeEEEEECCeecCCCCceEEeecC----eEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 236 PVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLDSDDHVTYEHDG----FVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G-~P~p~ItW~k~g~~l~~~~~~~~~~~g----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
+.+..+.+|+.+.|.|.+.+ .|.|.|+|+|||.++..+.++.+..++ .+|.|.++..+|+|.|+|.|.| |...
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~ 86 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKAT 86 (207)
T ss_dssp EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEE
T ss_pred CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeE
Confidence 34678899999999999865 799999999999999887776665443 2599999999999999999999 5554
Q ss_pred eEEEEEEee-------------------ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCCeEEEEeCCeeeccCCcEE
Q psy11143 311 SVAMIRING-------------------HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHK 370 (940)
Q Consensus 311 ~s~~l~V~~-------------------~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p~i~W~k~g~~i~~~~~~~ 370 (940)
....+.+.. ..+|.+...+ ...+.+|++++|.|.+.|. |.|.|+|+|+|..+..+.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~ 165 (207)
T 3rbs_A 87 NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD 165 (207)
T ss_dssp EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC
T ss_pred EEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE
Confidence 444433210 1267777655 4788999999999999999 999999999999997665543
Q ss_pred Ee-eeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 371 IH-RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 371 i~-~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
.. ...+|.|.++..+|+|.|+|.|.|..|...+++.|+++
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 166 FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 32 23479999999999999999999999999999988654
No 122
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.88 E-value=1.7e-21 Score=198.43 Aligned_cols=183 Identities=26% Similarity=0.410 Sum_probs=150.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCC-CCeEEEe-ec--eEEEEcccccCCCeEEEEEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD-DHVTYEH-DG--FVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~-~~~~~~~-~g--s~L~I~~v~~~DsG~YtC~a~ 119 (940)
.+|.+...|....+.+|+.++|.|.+.+.|.+.|.|+|++..+... .+.++.. .+ ..|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 4789999999999999999999999999999999999999988754 3444432 22 268999999999999999999
Q ss_pred eCCCceEEEEEEEEecccC---CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe---eeceE
Q psy11143 120 NSEGSAESVAMIRINGHRA---PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH---RTGSL 193 (940)
Q Consensus 120 n~~g~~~~~~~L~V~~~~~---P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~---~~~sL 193 (940)
|..|.....+.|.|...+. |.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+. ..+.|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L 162 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEE
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEE
Confidence 9988877777777765321 22222334567889999999999999999999999999988766666553 23579
Q ss_pred EEee-cccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 194 RLYN-IGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 194 ~I~~-v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.|.+ ++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999 99999999999999999998888888775
No 123
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=5.9e-21 Score=193.22 Aligned_cols=179 Identities=25% Similarity=0.536 Sum_probs=148.2
Q ss_pred CCeeeeCCC--eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 229 PPIFIQRPV--STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 229 ~p~~~~~p~--~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
||.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+.+|.|.++..+|+|.|+|.+.|..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 455555443 467789999999999999999999999999999888888777777789999999999999999999999
Q ss_pred CCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeC--Ceeecc-----CCcEEEee---ece
Q psy11143 307 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKD--EAEFVE-----DRNHKIHR---TGS 376 (940)
Q Consensus 307 Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~--g~~i~~-----~~~~~i~~---~~s 376 (940)
+.....+.|.|. .+|.+...+ ...+.+|+.++|.|.+.|.|.|.+.|+++ +..+.. ..++.+.. .++
T Consensus 82 ~~~~~~~~l~V~--~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 82 GEDEKQAFLQVF--VQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp EEEEEEEEEEEE--EEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred cccceEEEEEEE--ccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 888777766664 466665544 45677899999999999999999999998 555543 23444433 357
Q ss_pred EEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 377 LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 377 L~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999999999998874
No 124
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=2.9e-21 Score=194.40 Aligned_cols=174 Identities=24% Similarity=0.464 Sum_probs=142.5
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecC----eEEEEeeeccCCCeEEEEEEEe
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG----FVLVLNGVRESDAGVYNCVAQN 304 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g----~sL~I~~v~~~DsG~YtC~A~N 304 (940)
+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+....+..+...+ ..|.|.++..+|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 345666778889999999999999999999999999999999877665554433 4699999999999999999999
Q ss_pred CCCCc-eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCC-eEEEEeCCeeeccCCcEEEeeeceEEEecC
Q psy11143 305 SEGSA-ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRTGSLRLYNI 382 (940)
Q Consensus 305 ~~Gs~-~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p-~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v 382 (940)
..+.. ...+.|.|. .+|.+...+....+.+|+.++|.|.+.|.|.| .|.|++++..+..... ...+|.|.++
T Consensus 82 ~~~~~~~~~~~l~V~--~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----~~~~L~i~~~ 155 (182)
T 1rhf_A 82 GGETEISQPVWLTVE--GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----SPSVLNVTGV 155 (182)
T ss_dssp CTTCEECCCEEEEEE--CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----SSEEEEECCC
T ss_pred CCCcEEEEEEEEEEe--cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----CceEEEEecc
Confidence 87653 345556665 68889888888899999999999999999999 9999999988754322 4568999988
Q ss_pred CCCCCeEEEEEEEeCCeeEEE-EEEEEEe
Q psy11143 383 GPQDSGLYRCTASNLLGEDVA-EGYLTVT 410 (940)
Q Consensus 383 ~~~D~G~YtC~A~N~~G~~~~-s~~L~V~ 410 (940)
+|+|.|+|.|.|..|.... ++.|.|+
T Consensus 156 --~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 156 --TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp --SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred --ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 5899999999999998864 7788774
No 125
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.87 E-value=5.2e-21 Score=193.91 Aligned_cols=181 Identities=21% Similarity=0.376 Sum_probs=147.1
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeC-CCeEEEEE-CCeecC-CCCceEEe---ecCeEEEEeeeccCCCeEEEEEE
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHP-LPQMTWFH-DGNSLD-SDDHVTYE---HDGFVLVLNGVRESDAGVYNCVA 302 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P-~p~ItW~k-~g~~l~-~~~~~~~~---~~g~sL~I~~v~~~DsG~YtC~A 302 (940)
++.+...|....+.+|+.+.|.|.+.+.| .+.+.|++ +|..+. ...++.+. .....|.|.++..+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 34566677888899999999999999987 78999999 888776 34444443 23356999999999999999999
Q ss_pred EeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeecc--CCcEEEeeeceEEEe
Q psy11143 303 QNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE--DRNHKIHRTGSLRLY 380 (940)
Q Consensus 303 ~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~--~~~~~i~~~~sL~I~ 380 (940)
.|..+. ..+..+.+.+..+|.+...+....+.+|++++|.|.+.|.|.|.|.|++++..+.. ..++.+..+++|.|.
T Consensus 82 ~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (191)
T 1epf_A 82 TAEDGT-QSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 160 (191)
T ss_dssp EETTTE-EEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEET
T ss_pred EcCCCc-ceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEEC
Confidence 999853 23344445545788888888888999999999999999999999999999998753 346666677799999
Q ss_pred cCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 381 NIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 381 ~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
++..+|+|.|+|.|.|..|.......+.|.
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred CCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 999999999999999999866666666553
No 126
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.87 E-value=2e-21 Score=201.39 Aligned_cols=189 Identities=29% Similarity=0.534 Sum_probs=150.1
Q ss_pred eeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC--ceEE-eecCeE---EEEeeeccCCCe
Q psy11143 223 LTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTY-EHDGFV---LVLNGVRESDAG 296 (940)
Q Consensus 223 L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~--~~~~-~~~g~s---L~I~~v~~~DsG 296 (940)
+.+...+|.+...+....+.+|+.+.|.|.+.|.|.+.|.|+++|..+.... ...+ ..++.. |.|.+++.+|+|
T Consensus 3 ~~~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 82 (217)
T 2vr9_A 3 LAGQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGG 82 (217)
T ss_dssp ---CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCE
T ss_pred cccccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCc
Confidence 3445578888888989999999999999999999999999999999887542 1122 223332 267889999999
Q ss_pred EEEEEEEeCCCCce-eEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeCCeeec--------cC
Q psy11143 297 VYNCVAQNSEGSAE-SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFV--------ED 366 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~-~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~g~~i~--------~~ 366 (940)
.|+|.+.|..|... ....+.|.. .+|.+...+....+.+|+.++|.|.+ .|.|.|.|.|++++..+. ..
T Consensus 83 ~Y~C~~~n~~g~~~~~~~~l~v~~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 161 (217)
T 2vr9_A 83 EYWCVAKNRVGQAVSRHASLQIAV-LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGAS 161 (217)
T ss_dssp EEEEEEEETTEEEECCCEEEEECE-ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CC
T ss_pred eEEEEEecCCCccccccceEEEEE-eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccC
Confidence 99999999988663 345666654 35556666777889999999999999 899999999999999886 34
Q ss_pred CcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 367 RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 367 ~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
.++.+...++|.|.++..+|+|.|+|.|.|..|....+..+.+...
T Consensus 162 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 162 SRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp CSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred CcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 4555566779999999999999999999999999888766665543
No 127
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.87 E-value=4.6e-21 Score=201.81 Aligned_cols=187 Identities=27% Similarity=0.519 Sum_probs=146.0
Q ss_pred CCCeeeeC----CCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCc---eEEeecCeEEEEeeeccCCCeEEEE
Q psy11143 228 APPIFIQR----PVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH---VTYEHDGFVLVLNGVRESDAGVYNC 300 (940)
Q Consensus 228 ~~p~~~~~----p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~---~~~~~~g~sL~I~~v~~~DsG~YtC 300 (940)
.+|.+... +....+.+|+++.|.|.+.|.|.+.+.|++++..+..... ........+|.|.++..+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 45555432 4567899999999999999999999999999998875433 2444455569999999999999999
Q ss_pred EEEeCCCCceeEEEEEEeecc--CCeEEE-cCCceeecCCCeEEEEEeecCcCCCeEEEEe----CCeeeccCCcEEE--
Q psy11143 301 VAQNSEGSAESVAMIRINGHR--APRLVV-KPFDMRAPAGSSVEIPCKPDGEPLPRISWSK----DEAEFVEDRNHKI-- 371 (940)
Q Consensus 301 ~A~N~~Gs~~~s~~l~V~~~~--~P~i~~-~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k----~g~~i~~~~~~~i-- 371 (940)
.+.|..|.......+.|.... +|.+.. .+....+.+|+.++|.|.+.|.|.|.+.|++ ++..+..+.....
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 999999988888888876532 333333 4566788999999999999999999999999 7777654432211
Q ss_pred ---------eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 372 ---------HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 372 ---------~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
...++|.|.++..+|+|.|+|.|.|..|....++.|.|.++|.
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 221 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRA 221 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-----
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCC
Confidence 1245799999999999999999999999999999999998765
No 128
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.86 E-value=7.6e-21 Score=193.75 Aligned_cols=175 Identities=23% Similarity=0.450 Sum_probs=145.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEee-ccCCCeEEEEECCEeecCCC--CeEEE--ee-------ceEEEEcccccCCCe
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDSDD--HVTYE--HD-------GFVLVLNGVRESDAG 112 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~-g~P~p~V~W~kdg~~I~~~~--~~~~~--~~-------gs~L~I~~v~~~DsG 112 (940)
+|.|...|....+.+|+.++|.|.+. +.|.+.|.|+|+|..+.... +.++. .+ ...|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 68899999999999999999999999 99999999999999987653 23333 11 356899999999999
Q ss_pred EEEEEEEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCC-eEEEeeCCeeccccCceEEeee
Q psy11143 113 VYNCVAQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRT 190 (940)
Q Consensus 113 ~YtC~a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-~ItW~k~g~~i~~~~~~~~~~~ 190 (940)
.|+|.+.|..+.... .+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.+ .+.|++++..+...... ...
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--~~~ 157 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEG--LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--GPQ 157 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECC--SCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--SCC
T ss_pred EEEEEEEeCCCceecccEEEEEec--CCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--CCC
Confidence 999999998766444 36666654 5778888888899999999999999999999 99999999888655433 345
Q ss_pred ceEEEeecccCCCceEEEEEEcCCccee-eeeeeee
Q psy11143 191 GSLRLYNIGPQDSGLYRCTASNLLGEDV-AEGYLTV 225 (940)
Q Consensus 191 ~sL~I~~v~~~DsG~YtC~a~N~~g~~s-~s~~L~V 225 (940)
+.|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 158 ~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 158 RSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 679999887 79999999999999875 6777777
No 129
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.86 E-value=3e-21 Score=194.83 Aligned_cols=181 Identities=22% Similarity=0.423 Sum_probs=141.1
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCC--CCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD--DHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~--~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
+|.|...|.+..+.+|+.++|.|.+.+.|.+.+.|++++..+... .+.....++ .|.|.+++.+|+|.|+|.+.+..
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN-NLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS-CEEETTCCGGGCEEEEEEEEETT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC-CEEEeeCCHhHCcEEEEEEEEcC
Confidence 678888999999999999999999999999999999999887643 333333333 47999999999999999999988
Q ss_pred CceEEEEEEEEecccCCeeEecCC--ceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEee-eceEEEeecc
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPF--DMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR-TGSLRLYNIG 199 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~--~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~-~~sL~I~~v~ 199 (940)
+.......+.+....+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..... .+.|.|.++.
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 160 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 160 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCC
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCC
Confidence 665543333333333444544433 4577889999999999999999999999999887766655443 4579999999
Q ss_pred cCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 200 PQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.+|+|.|+|.|.|..|....++.|.|.
T Consensus 161 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 161 NSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 999999999999999998888888775
No 130
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.86 E-value=4.3e-21 Score=199.93 Aligned_cols=178 Identities=25% Similarity=0.519 Sum_probs=144.4
Q ss_pred CeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCce---EEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEE
Q psy11143 237 VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV---TYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVA 313 (940)
Q Consensus 237 ~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~---~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~ 313 (940)
....+.+|+++.|.|.+.+.|.+.+.|++++..+....+. .......+|.|.++..+|+|.|+|.+.|..|......
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 6778999999999999999999999999999998755432 3444455699999999999999999999999888788
Q ss_pred EEEEeecc--CCeEEE-cCCceeecCCCeEEEEEeecCcCCCeEEEEe----CCeeeccCCcEE--Ee--------eece
Q psy11143 314 MIRINGHR--APRLVV-KPFDMRAPAGSSVEIPCKPDGEPLPRISWSK----DEAEFVEDRNHK--IH--------RTGS 376 (940)
Q Consensus 314 ~l~V~~~~--~P~i~~-~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k----~g~~i~~~~~~~--i~--------~~~s 376 (940)
.+.|.... +|.+.. .+....+.+|+.++|.|.+.+.|.|.+.|++ +|..+..+.... .. ..++
T Consensus 107 ~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEV 186 (231)
T ss_dssp EEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTE
T ss_pred EEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccE
Confidence 88776532 333332 2456788999999999999999999999999 777665433211 11 1346
Q ss_pred EEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 377 LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 377 L~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
|.|.++..+|+|.|+|.|.|..|....++.|.|..++.
T Consensus 187 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 224 (231)
T 3ojm_B 187 LALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQ 224 (231)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-
T ss_pred EEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCC
Confidence 99999999999999999999999999999999998765
No 131
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.86 E-value=1.4e-20 Score=190.51 Aligned_cols=176 Identities=22% Similarity=0.439 Sum_probs=143.1
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEE-CCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeCCC
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH-DGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEG 123 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~k-dg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~~g 123 (940)
.+...|.+..+.+|+.++|.|.+.+.|. .|.|++ ++..+....+..+..++ ..|.|.+++.+|+|.|+|.+.|..|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 4566778889999999999999999887 999999 78888777777766554 5689999999999999999999988
Q ss_pred ceE-EEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccc--cCceEEeeeceEEEeeccc
Q psy11143 124 SAE-SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE--DRNHKIHRTGSLRLYNIGP 200 (940)
Q Consensus 124 ~~~-~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~--~~~~~~~~~~sL~I~~v~~ 200 (940)
... ..+.|.|. .+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. ..++....++.|.|.+++.
T Consensus 83 ~~~~~~~~l~v~--~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 160 (189)
T 2v44_A 83 QTQEATVVLEIY--QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINK 160 (189)
T ss_dssp CEEEEEEEEEEE--CCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCG
T ss_pred CcEEEEEEEEEe--cCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCc
Confidence 763 35555554 456677677778899999999999999999999999999887753 4556666677899999999
Q ss_pred CCCceEEEEEEcCCcceeeeeeeee
Q psy11143 201 QDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 201 ~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
+|+|.|+|.|.|..+.......+.|
T Consensus 161 ~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 161 SDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ccCeEEEEEEEccccCceeeeeEEE
Confidence 9999999999999876654444443
No 132
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.86 E-value=1.6e-20 Score=190.76 Aligned_cols=176 Identities=23% Similarity=0.365 Sum_probs=146.4
Q ss_pred CCeeEecCCceeecC-CCcEEEEEEeCCCCC--CeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCC
Q psy11143 138 APRLVVKPFDMRAPA-GSSVEIPCKPDGEPL--PRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 138 ~P~~~~~p~~~~v~~-Ge~vtL~C~v~g~P~--p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
+|.+.. +....+.+ |+.+.|.|.+.+.|. +.+.|++++..+....... .++.|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~n~- 78 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA--SNMEYRINKPRAEDSGEYHCVYHFV- 78 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC--SEEEEEESSCCGGGCEEEEEEEEET-
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe--ccEEEEEecCCcccCEEEEEEEEeC-
Confidence 355554 44566666 999999999998876 7899999999887654332 4578999999999999999999999
Q ss_pred cceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEE--CCeecC---CCCceEEeecC--eEEEE
Q psy11143 215 GEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH--DGNSLD---SDDHVTYEHDG--FVLVL 287 (940)
Q Consensus 215 g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k--~g~~l~---~~~~~~~~~~g--~sL~I 287 (940)
+..+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++ ++..+. ...++.+..++ .+|.|
T Consensus 79 ~~~~~~~~l~V~-~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i 157 (190)
T 2wv3_A 79 SAPKANATIEVK-AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNI 157 (190)
T ss_dssp TEEEEEEEEEEE-CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEE
T ss_pred CcccccEEEEEe-cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEE
Confidence 888888889998 56777777888889999999999999999999999999 777664 44555555443 35999
Q ss_pred eeec-cCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 288 NGVR-ESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 288 ~~v~-~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.++. .+|+|.|+|.|.|..|....++.|.|+
T Consensus 158 ~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 158 VNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp CSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999 799999999999999999888888875
No 133
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.86 E-value=1.7e-20 Score=193.10 Aligned_cols=171 Identities=19% Similarity=0.314 Sum_probs=142.4
Q ss_pred ecCCeEEEEEEEeee-CCCeEEEEECCeecCCCCceEEeecC--eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 242 STGSTSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 242 ~~G~~v~L~C~v~G~-P~p~ItW~k~g~~l~~~~~~~~~~~g--~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
..++.+.|.|.+.+. |.+.++|+|+|..+....++.+...+ ..|.|.++..+|+|.|+|.|.|..|....+..+.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367888999999885 58899999999999888777766554 349999999999999999999988877766555443
Q ss_pred e------------------ccCCeEE-EcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeee----c
Q psy11143 319 G------------------HRAPRLV-VKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT----G 375 (940)
Q Consensus 319 ~------------------~~~P~i~-~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~----~ 375 (940)
. ...|.+. ..+....+.+|+.++|.|.+.|.|.|.+.|+|++..+....++.+... .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 1 1134444 445567899999999999999999999999999999987777776554 3
Q ss_pred eEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 376 SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 376 sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
+|.|.++..+|+|.|+|.|.|..|....++.|.|..|
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 8999999999999999999999999999999999854
No 134
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.86 E-value=1.8e-20 Score=189.86 Aligned_cols=180 Identities=21% Similarity=0.370 Sum_probs=143.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccC-CCeEEEEE-CCEeecC-CCCeEEE---eeceEEEEcccccCCCeEEEEEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHP-LPQMTWFH-DGNSLDS-DDHVTYE---HDGFVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P-~p~V~W~k-dg~~I~~-~~~~~~~---~~gs~L~I~~v~~~DsG~YtC~a 118 (940)
|+.+...|....+.+|+.++|.|.+.+.| .+.|.|++ +|..+.. ..+..+. .....|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 56778888999999999999999999876 78999999 8888763 3344443 23456899999999999999999
Q ss_pred EeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeecccc--CceEEeeeceEEEe
Q psy11143 119 QNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVED--RNHKIHRTGSLRLY 196 (940)
Q Consensus 119 ~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~--~~~~~~~~~sL~I~ 196 (940)
.+..+. .....+.+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++....++.|.|.
T Consensus 82 ~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (191)
T 1epf_A 82 TAEDGT-QSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 160 (191)
T ss_dssp EETTTE-EEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEET
T ss_pred EcCCCc-ceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEEC
Confidence 998853 233334444445678888888889999999999999999999999999999888643 34555566789999
Q ss_pred ecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 197 NIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
+++.+|+|.|+|.|.|..+.......+.|
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 99999999999999998876555554444
No 135
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.86 E-value=1.2e-20 Score=189.91 Aligned_cols=173 Identities=24% Similarity=0.465 Sum_probs=139.3
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEee----ceEEEEcccccCCCeEEEEEEEe
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD----GFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~----gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
+|.+...|....+.+|+.++|.|.+.+.|.+.|.|+|++..+.......+... ...|.|.+++.+|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 56778888899999999999999999999999999999999876655544433 25689999999999999999999
Q ss_pred CCCceE-EEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCC-eEEEeeCCeeccccCceEEeeeceEEEeec
Q psy11143 121 SEGSAE-SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRTGSLRLYNI 198 (940)
Q Consensus 121 ~~g~~~-~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v 198 (940)
..+... ..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.|.++
T Consensus 82 ~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----~~~~L~i~~~ 155 (182)
T 1rhf_A 82 GGETEISQPVWLTVEG--VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----SPSVLNVTGV 155 (182)
T ss_dssp CTTCEECCCEEEEEEC--SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----SSEEEEECCC
T ss_pred CCCcEEEEEEEEEEec--CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----CceEEEEecc
Confidence 866544 356666654 6778888888899999999999999999999 9999999988754322 4567899888
Q ss_pred ccCCCceEEEEEEcCCccee-eeeeeee
Q psy11143 199 GPQDSGLYRCTASNLLGEDV-AEGYLTV 225 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~g~~s-~s~~L~V 225 (940)
+|+|.|+|.|.|..|... ..+.|.|
T Consensus 156 --~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 156 --TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp --SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --ccCeEEEEEEECCCCCcccceEEEEe
Confidence 589999999999999874 3666665
No 136
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.85 E-value=6.9e-21 Score=197.99 Aligned_cols=170 Identities=15% Similarity=0.299 Sum_probs=135.6
Q ss_pred CCceeecCCCcEEEEEEeCC-CCCCeEEEeeCCeeccccCceEEeeec-----eEEEeecccCCCceEEEEEEcCCccee
Q psy11143 145 PFDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFVEDRNHKIHRTG-----SLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 145 p~~~~v~~Ge~vtL~C~v~g-~P~p~ItW~k~g~~i~~~~~~~~~~~~-----sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
+.+..+.+|+.+.|.|.+.+ .|.|.|+|+++|..+..+.++.+..+. +|.|.+++.+|+|.|+|.|.| |...
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~ 86 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKAT 86 (207)
T ss_dssp EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEE
T ss_pred CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeE
Confidence 33678899999999999974 799999999999999877666554332 699999999999999999999 4433
Q ss_pred eeeeeeec--------------------CCCCeeeeCCCeeEEecCCeEEEEEEEeee-CCCeEEEEECCeecCCCCceE
Q psy11143 219 AEGYLTVT--------------------GAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVT 277 (940)
Q Consensus 219 ~s~~L~V~--------------------~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p~ItW~k~g~~l~~~~~~~ 277 (940)
....+.+. ..+|.+...+ ...+.+|+.+.|.|.+.|. |.|.|+|+|+|..+..+.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~ 165 (207)
T 3rbs_A 87 NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD 165 (207)
T ss_dssp EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC
T ss_pred EEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE
Confidence 33332211 0256665544 4788899999999999998 999999999999998766554
Q ss_pred EeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEE
Q psy11143 278 YEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 278 ~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V 317 (940)
......+|.|.++..+|+|.|+|.|.|..|....++.|.+
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 166 FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 3333345999999999999999999999999988887765
No 137
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.85 E-value=2.8e-20 Score=188.25 Aligned_cols=179 Identities=25% Similarity=0.529 Sum_probs=144.7
Q ss_pred CCeEEeCCC--cEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 45 PPIFIQRPV--STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 45 pP~~~~~p~--~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
||.+...+. .+.+.+|+.++|.|.+.+.|.+.|.|++++..+....+..+...+..|.|.+++.+|+|.|+|.+.+..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 677766544 467889999999999999999999999999999877777776666778999999999999999999998
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeC--Ceeccc-----cCceEEee---ece
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKD--EAEFVE-----DRNHKIHR---TGS 192 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~--g~~i~~-----~~~~~~~~---~~s 192 (940)
+.......|.|.. .|.+... ....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++.... ...
T Consensus 82 ~~~~~~~~l~V~~--~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 82 GEDEKQAFLQVFV--QPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp EEEEEEEEEEEEE--EEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred cccceEEEEEEEc--cCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 8877777777754 3444433 345677899999999999999999999997 444432 22333322 357
Q ss_pred EEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 193 LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 193 L~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999998888887763
No 138
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.85 E-value=1.9e-21 Score=201.75 Aligned_cols=164 Identities=19% Similarity=0.263 Sum_probs=127.1
Q ss_pred eeEEecCCeEEEEEE---EeeeCCCeEEEEECCeecCC-----------------CCceEE--eecCeEEEEeeeccCCC
Q psy11143 238 STTYSTGSTSRITCL---VEGHPLPQMTWFHDGNSLDS-----------------DDHVTY--EHDGFVLVLNGVRESDA 295 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~---v~G~P~p~ItW~k~g~~l~~-----------------~~~~~~--~~~g~sL~I~~v~~~Ds 295 (940)
.+++..|+.++|.|. +.+.|.+.|+|+|+|..+.. ..++.+ ..+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 457789999999995 56789999999998753321 111121 22234599999999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeec----cCCcEEE
Q psy11143 296 GVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV----EDRNHKI 371 (940)
Q Consensus 296 G~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~----~~~~~~i 371 (940)
|.|+|.|.|..|.....+.|.|. .||.+...+.+..+.+|++++|.|.+.|.|.|.|+|++++..+. .+.++.+
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~--~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~ 159 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVV--KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMK 159 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE--EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEec--CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEE
Confidence 99999999999988887777775 57888888888889999999999999999999999998765442 3456666
Q ss_pred eeeceEEE---ecCCCCCCeEEEEEEEeCCeeEEE
Q psy11143 372 HRTGSLRL---YNIGPQDSGLYRCTASNLLGEDVA 403 (940)
Q Consensus 372 ~~~~sL~I---~~v~~~D~G~YtC~A~N~~G~~~~ 403 (940)
..+++|.| .++..+|+|.|+|.|.|..|.+..
T Consensus 160 ~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 160 EKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred eCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 66776544 689999999999999999998775
No 139
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.85 E-value=7.7e-21 Score=202.57 Aligned_cols=200 Identities=18% Similarity=0.296 Sum_probs=125.4
Q ss_pred CCCCCCeEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccC-----CCeEEEEECC--Eee-
Q psy11143 15 VQREHGGRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHP-----LPQMTWFHDG--NSL- 86 (940)
Q Consensus 15 v~~sDsG~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P-----~p~V~W~kdg--~~I- 86 (940)
++.+|+|.|+|.|. |.....+.+.+..++.+...|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~ 87 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPK 87 (254)
T ss_dssp ------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCce
Confidence 78999999999998 444444445555577788888999999999999999999887 4899999843 221
Q ss_pred ---------c--CCCCeEEEee--ceEEEEcccccCCCeEEEEEEEeCCCceEE-EEEEEEeccc-CCeeEecCCceeec
Q psy11143 87 ---------D--SDDHVTYEHD--GFVLVLNGVRESDAGVYNCVAQNSEGSAES-VAMIRINGHR-APRLVVKPFDMRAP 151 (940)
Q Consensus 87 ---------~--~~~~~~~~~~--gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~-~~~L~V~~~~-~P~~~~~p~~~~v~ 151 (940)
. ...++..... ...|.|.+++.+|+|.|+|.|.|..+.... .+.+.|.... +|.+...+....+.
T Consensus 88 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~ 167 (254)
T 2c1o_A 88 RLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQL 167 (254)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHH
T ss_pred EEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhc
Confidence 1 1234444332 236899999999999999999987654332 3456665432 46666655444445
Q ss_pred CCCcEEEEEEeCC-CCC-CeEEEeeCCeecccc-C---------ceEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 152 AGSSVEIPCKPDG-EPL-PRISWSKDEAEFVED-R---------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 152 ~Ge~vtL~C~v~g-~P~-p~ItW~k~g~~i~~~-~---------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
.|+.++|.|.+.| .|. +.++|+++|..+... . .......+.|.|.++..+|+|.|+|.|.|.....
T Consensus 168 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 168 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 6889999999988 444 469999999877544 0 1111234579999999999999999999976543
No 140
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=1.2e-20 Score=193.77 Aligned_cols=180 Identities=21% Similarity=0.360 Sum_probs=138.4
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeec------------CCCCceEEeecCeEEEEeeeccCCCeEE
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSL------------DSDDHVTYEHDGFVLVLNGVRESDAGVY 298 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l------------~~~~~~~~~~~g~sL~I~~v~~~DsG~Y 298 (940)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++... +.+|.|.++..+|+|.|
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS--SSGITFSSVTRKDNGEY 80 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE--TTEEEESCCCGGGCEEE
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee--ceeEEEcccCcccCeEE
Confidence 4556677888999999999999999999999999987652 223344433 25699999999999999
Q ss_pred EEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEe-ecCcCCCeEEEEeCCe-eeccCCc--------
Q psy11143 299 NCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCK-PDGEPLPRISWSKDEA-EFVEDRN-------- 368 (940)
Q Consensus 299 tC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~-v~g~P~p~i~W~k~g~-~i~~~~~-------- 368 (940)
+|.|.|..|.......+.+.+..+|.+...+....+.+|+.++|.|. +.+.|.|.|.|++++. .+.....
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~ 160 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNS 160 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSS
T ss_pred EEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCc
Confidence 99999998844444444444445666655555567899999999999 7999999999999998 7754322
Q ss_pred -EEE-eeeceEEEecCCCCCCeEEEEEEEeCCeeE--EEEEEEEEecC
Q psy11143 369 -HKI-HRTGSLRLYNIGPQDSGLYRCTASNLLGED--VAEGYLTVTGE 412 (940)
Q Consensus 369 -~~i-~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~--~~s~~L~V~~~ 412 (940)
+.. ...++|.|.++..+|+|.|+|.|.|..|.. +..+.|.|++.
T Consensus 161 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 161 SFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp CEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred eeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 222 235689999999999999999999999988 45666777653
No 141
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.85 E-value=8.3e-21 Score=195.31 Aligned_cols=190 Identities=29% Similarity=0.556 Sum_probs=146.0
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCC----eEEE-eeceE----EEEcccccCCCeEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH----VTYE-HDGFV----LVLNGVRESDAGVY 114 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~----~~~~-~~gs~----L~I~~v~~~DsG~Y 114 (940)
.||.+...|....+.+|+.++|.|.+.+.|.+.|.|++++..+..... .+.. .++.+ |.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 368888899999999999999999999999999999999998864331 1222 33332 34556799999999
Q ss_pred EEEEEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeeccccCceEEeeece
Q psy11143 115 NCVAQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRNHKIHRTGS 192 (940)
Q Consensus 115 tC~a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~~~~~~~~~~~~s 192 (940)
+|.+.|..|.... .+.|.|... ++.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+..........++.
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~-~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~ 166 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAIL-RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGK 166 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEE-CSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTE
T ss_pred EEEEECCCCceeecceEEEEEec-cccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCe
Confidence 9999998876533 566666543 3345556677789999999999999 889999999999999887655555556778
Q ss_pred EEEeecccCCCceEEEEEEcCCcceee-eeeeeecCCCCeeeeC
Q psy11143 193 LRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTGAPPIFIQR 235 (940)
Q Consensus 193 L~I~~v~~~DsG~YtC~a~N~~g~~s~-s~~L~V~~~~p~~~~~ 235 (940)
|.|.+++.+|+|.|+|.|.|..|.... .+.|.|. .+|.+...
T Consensus 167 L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~-~~P~~~~~ 209 (212)
T 2v9r_A 167 LMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL-ERPSFVKA 209 (212)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE-C-------
T ss_pred EEEeeCCHhhCeeEEEEEecccCceecceEEEEEE-eCchHhhh
Confidence 999999999999999999999998654 4788887 45555443
No 142
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.84 E-value=1.7e-20 Score=194.30 Aligned_cols=182 Identities=30% Similarity=0.584 Sum_probs=146.4
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC--CeEEE-eeceE---EEEcccccCCCeEEEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTYE-HDGFV---LVLNGVRESDAGVYNCV 117 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~--~~~~~-~~gs~---L~I~~v~~~DsG~YtC~ 117 (940)
.+|.+...|....+.+|+.++|.|.+.+.|.+.|.|+|+|..+.... ..++. .++.+ |.|.+++.+|+|.|+|.
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEE
Confidence 57899999999999999999999999999999999999999887542 22333 23333 36888999999999999
Q ss_pred EEeCCCceEE-EEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeeccc--------cCceEE
Q psy11143 118 AQNSEGSAES-VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVE--------DRNHKI 187 (940)
Q Consensus 118 a~n~~g~~~~-~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~~--------~~~~~~ 187 (940)
+.|..|.... ...+.|... +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ..+...
T Consensus 88 ~~n~~g~~~~~~~~l~v~~~-~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 166 (217)
T 2vr9_A 88 AKNRVGQAVSRHASLQIAVL-RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166 (217)
T ss_dssp EEETTEEEECCCEEEEECEE-CCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE
T ss_pred EecCCCccccccceEEEEEe-CCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe
Confidence 9998886543 556666543 3455566777889999999999999 8899999999999988862 344445
Q ss_pred eeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 188 HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 188 ~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
...++|.|.+++.+|+|.|+|.|.|..|....+..+.+.
T Consensus 167 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 167 VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp ETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 556789999999999999999999999987766555544
No 143
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.84 E-value=1.7e-20 Score=191.06 Aligned_cols=177 Identities=21% Similarity=0.322 Sum_probs=142.1
Q ss_pred eCCCeeEEecCCeEEEEEE-EeeeCC-CeEEEEECCeecC--CCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 234 QRPVSTTYSTGSTSRITCL-VEGHPL-PQMTWFHDGNSLD--SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~-v~G~P~-p~ItW~k~g~~l~--~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
..+....+.+|+.+.|.|. +.+.|. +.++|++++..+. ...+......+.+|.|.++..+|+|.|+|.+.|..+..
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTE
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCc
Confidence 3456778999999999999 899999 9999999998774 33334444444559999999999999999999977655
Q ss_pred ee---EEEEEEee-----ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEec
Q psy11143 310 ES---VAMIRING-----HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYN 381 (940)
Q Consensus 310 ~~---s~~l~V~~-----~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~ 381 (940)
.. ...+.+.. ..+|.+...+....+.+|++++|.|.+.|.|.|.|.|++++..+....+. ....++|.|.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~-~~~~~~L~i~~ 171 (201)
T 3s97_C 93 SVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI-STSGAVLKIFN 171 (201)
T ss_dssp EEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEE-ETTTTEEEECS
T ss_pred chhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceee-cCCCCEEEEcc
Confidence 43 22223321 24566776666788999999999999999999999999999877654322 23456899999
Q ss_pred CCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 382 IGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 382 v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
+..+|+|.|+|.|.|..|....++.|.|++
T Consensus 172 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 172 IQLEDEGIYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CChhhCEEEEEEEEecCCceeeeEEEEEeC
Confidence 999999999999999999999999999863
No 144
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=1.4e-21 Score=219.13 Aligned_cols=201 Identities=20% Similarity=0.225 Sum_probs=156.2
Q ss_pred CCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeec
Q psy11143 202 DSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD 281 (940)
Q Consensus 202 DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~ 281 (940)
+.|.|+|.+.+.. ....+.+ ..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...........
T Consensus 136 ~~~~~~C~~~~~l----~~l~~~~-c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 210 (347)
T 2ifg_A 136 PEQKLQCHGQGPL----AHMPNAS-CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLP 210 (347)
T ss_dssp GGGCCCCSSSSCS----SCCCCTT-CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSS
T ss_pred cccCCCCCCChHH----hcCCccc-CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecc
Confidence 4689999876621 1122222 2567788888888999999999999999999999999999876543221111223
Q ss_pred CeEEEEeeeccCCCe-EEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCC
Q psy11143 282 GFVLVLNGVRESDAG-VYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE 360 (940)
Q Consensus 282 g~sL~I~~v~~~DsG-~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g 360 (940)
..+|.|.++..+|+| .|+|.|.|..|.....+.+.|. .+|.+ ....+.+|+.++|.|.+.|.|.|.|+|+|+|
T Consensus 211 ~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~--~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g 284 (347)
T 2ifg_A 211 SLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS--FPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNG 284 (347)
T ss_dssp EEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCB--EEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETT
T ss_pred cceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEc--CCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCC
Confidence 345999999999999 9999999999888776655554 56665 1123457899999999999999999999999
Q ss_pred eeeccCCcEEE----------eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 361 AEFVEDRNHKI----------HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 361 ~~i~~~~~~~i----------~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
..+........ ...++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 285 SVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred EECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 98875544332 125679999999999999999999999999999999887653
No 145
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=5.8e-20 Score=191.50 Aligned_cols=173 Identities=21% Similarity=0.388 Sum_probs=144.1
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 307 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~G 307 (940)
..+.+...|....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... +..|.|.++..+|+|.|+|.+.|..|
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~~~n~~~ 89 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN-------TSELIFNAVHVKDAGFYVCRVNNNFT 89 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC-------SSEEEETTCCGGGCEEEEEEEECTTC
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC-------CCEEEEccCChhhCeEeEEEEEcCCC
Confidence 45677788889999999999999999999999999999999886542 34599999999999999999999987
Q ss_pred Cc-eeEEEEEEeec-------------cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee
Q psy11143 308 SA-ESVAMIRINGH-------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR 373 (940)
Q Consensus 308 s~-~~s~~l~V~~~-------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~ 373 (940)
.. ...+.+.|... .+|.+...+....+.+|+.++|.|.+.|.|.|.|.|++++..+....
T Consensus 90 ~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~------ 163 (218)
T 3k0w_A 90 FEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------ 163 (218)
T ss_dssp CEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC------
T ss_pred CceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC------
Confidence 55 34466666532 22778888888899999999999999999999999999998876543
Q ss_pred eceEEEecCCCCCCeEEEEEEEeCCee-EEEEEEEEEecCC
Q psy11143 374 TGSLRLYNIGPQDSGLYRCTASNLLGE-DVAEGYLTVTGEN 413 (940)
Q Consensus 374 ~~sL~I~~v~~~D~G~YtC~A~N~~G~-~~~s~~L~V~~~~ 413 (940)
.++|.|.++..+|+|.|+|.|.|..|. .+..+.|.|.+.+
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 164 KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 357999999999999999999999997 5557778887654
No 146
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.84 E-value=8.7e-20 Score=192.01 Aligned_cols=184 Identities=28% Similarity=0.522 Sum_probs=145.5
Q ss_pred CCCeEEeC----CCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCC---eEEEeeceEEEEcccccCCCeEEEE
Q psy11143 44 APPIFIQR----PVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH---VTYEHDGFVLVLNGVRESDAGVYNC 116 (940)
Q Consensus 44 ~pP~~~~~----p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~---~~~~~~gs~L~I~~v~~~DsG~YtC 116 (940)
.+|.+... +....+.+|+++.|.|.+.+.|.+.|.|+|+|..+..... .........|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35655433 4568899999999999999999999999999998864432 2444455578999999999999999
Q ss_pred EEEeCCCceEEEEEEEEecccC--CeeE-ecCCceeecCCCcEEEEEEeCCCCCCeEEEee----CCeeccccCceEE--
Q psy11143 117 VAQNSEGSAESVAMIRINGHRA--PRLV-VKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK----DEAEFVEDRNHKI-- 187 (940)
Q Consensus 117 ~a~n~~g~~~~~~~L~V~~~~~--P~~~-~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k----~g~~i~~~~~~~~-- 187 (940)
.+.|..+.......+.|..... |.+. ..+....+.+|+.++|.|.+.+.|.+.+.|++ ++..+........
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 9999988887788888876432 3333 34567788999999999999999999999999 7777654433211
Q ss_pred ---------eeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC
Q psy11143 188 ---------HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 227 (940)
Q Consensus 188 ---------~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~ 227 (940)
...+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 1345799999999999999999999999999999998874
No 147
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=3.4e-20 Score=190.45 Aligned_cols=178 Identities=21% Similarity=0.366 Sum_probs=135.0
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeec------------CCCCeEEEeeceEEEEcccccCCCe
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD------------SDDHVTYEHDGFVLVLNGVRESDAG 112 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~------------~~~~~~~~~~gs~L~I~~v~~~DsG 112 (940)
|..+...+..+.+.+|+.+.|.|.+.+.|.+.|.|+|++..+. ...+.. ..+..|.|.+++.+|+|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~L~i~~v~~~D~G 78 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT--FSSSGITFSSVTRKDNG 78 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEE--EETTEEEESCCCGGGCE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEE--eeceeEEEcccCcccCe
Confidence 3456777888999999999999999999999999999876531 122333 23366899999999999
Q ss_pred EEEEEEEeCCCce--EEEEEEEEecccCCeeEecCCceeecCCCcEEEEEE-eCCCCCCeEEEeeCCe-eccccCc----
Q psy11143 113 VYNCVAQNSEGSA--ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCK-PDGEPLPRISWSKDEA-EFVEDRN---- 184 (940)
Q Consensus 113 ~YtC~a~n~~g~~--~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~-v~g~P~p~ItW~k~g~-~i~~~~~---- 184 (940)
.|+|.+.+..|.. ...+.|.|.. +|.+...+....+.+|+.++|.|. +.+.|.+.+.|++++. .+.....
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~ 156 (212)
T 1f97_A 79 EYTCMVSEEGGQNYGEVSIHLTVLV--PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRA 156 (212)
T ss_dssp EEEEEEEETTSSSEEEEEEEEEEEB--CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBS
T ss_pred EEEEEEEccCCCcccEEEEEEEEEc--CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccccc
Confidence 9999999987743 3355555554 444444444567889999999999 7899999999999998 7764322
Q ss_pred -----eEE-eeeceEEEeecccCCCceEEEEEEcCCcce--eeeeeeeec
Q psy11143 185 -----HKI-HRTGSLRLYNIGPQDSGLYRCTASNLLGED--VAEGYLTVT 226 (940)
Q Consensus 185 -----~~~-~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~--s~s~~L~V~ 226 (940)
+.. ...+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 157 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 157 FMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred ccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 112 234579999999999999999999999987 445555554
No 148
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.83 E-value=5.2e-20 Score=191.72 Aligned_cols=184 Identities=25% Similarity=0.516 Sum_probs=146.1
Q ss_pred CCeEEeCC----CcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCe---EEEeeceEEEEcccccCCCeEEEEE
Q psy11143 45 PPIFIQRP----VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV---TYEHDGFVLVLNGVRESDAGVYNCV 117 (940)
Q Consensus 45 pP~~~~~p----~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~---~~~~~gs~L~I~~v~~~DsG~YtC~ 117 (940)
+|.|...+ ....+.+|+.++|.|.+.+.|.+.|.|+|++..+...... ........|.|.+++.+|+|.|+|.
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 94 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEE
Confidence 56665544 7788999999999999999999999999999988654332 4444555789999999999999999
Q ss_pred EEeCCCceEEEEEEEEecccC--CeeEe-cCCceeecCCCcEEEEEEeCCCCCCeEEEee----CCeeccccCceEE--e
Q psy11143 118 AQNSEGSAESVAMIRINGHRA--PRLVV-KPFDMRAPAGSSVEIPCKPDGEPLPRISWSK----DEAEFVEDRNHKI--H 188 (940)
Q Consensus 118 a~n~~g~~~~~~~L~V~~~~~--P~~~~-~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k----~g~~i~~~~~~~~--~ 188 (940)
+.|..+.......|.|...+. |.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+........ .
T Consensus 95 ~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~ 174 (231)
T 3ojm_B 95 VENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVL 174 (231)
T ss_dssp EEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEE
T ss_pred EecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEe
Confidence 999988887788888876433 22222 3466788999999999999999999999999 7766643322111 1
Q ss_pred --------eeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCC
Q psy11143 189 --------RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGA 228 (940)
Q Consensus 189 --------~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~ 228 (940)
..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...
T Consensus 175 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 175 KHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp EECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecC
Confidence 1246999999999999999999999999998999988843
No 149
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.83 E-value=1.8e-19 Score=185.44 Aligned_cols=168 Identities=21% Similarity=0.326 Sum_probs=139.8
Q ss_pred cCCCcEEEEEEeCCC-CCCeEEEeeCCeeccccCceEEeeec---eEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 151 PAGSSVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 151 ~~Ge~vtL~C~v~g~-P~p~ItW~k~g~~i~~~~~~~~~~~~---sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
..++.+.|.|.+.+. |.+.++|++++..+....++.+...+ .|.|.+++.+|+|.|+|.+.|..+.....+.|.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367888999998884 58899999999998877776654433 49999999999999999999988887777777654
Q ss_pred C--------------------CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeec-C--e
Q psy11143 227 G--------------------APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD-G--F 283 (940)
Q Consensus 227 ~--------------------~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~-g--~ 283 (940)
. .++.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+... + .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 2 334444556678899999999999999999999999999999988777766544 2 3
Q ss_pred EEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 284 VLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 284 sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 69999999999999999999999998888777775
No 150
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=2.4e-20 Score=193.46 Aligned_cols=164 Identities=21% Similarity=0.228 Sum_probs=127.5
Q ss_pred ceeecCCCcEEEEEE---eCCCCCCeEEEeeCCeeccc-----------------cCceEEe---eeceEEEeecccCCC
Q psy11143 147 DMRAPAGSSVEIPCK---PDGEPLPRISWSKDEAEFVE-----------------DRNHKIH---RTGSLRLYNIGPQDS 203 (940)
Q Consensus 147 ~~~v~~Ge~vtL~C~---v~g~P~p~ItW~k~g~~i~~-----------------~~~~~~~---~~~sL~I~~v~~~Ds 203 (940)
++++..|++++|.|. +.+.|.+.|+|+|+|..+.. ..++... ....|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 467889999999995 66789999999997643321 0111111 234699999999999
Q ss_pred ceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecC----CCCceEEe
Q psy11143 204 GLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD----SDDHVTYE 279 (940)
Q Consensus 204 G~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~----~~~~~~~~ 279 (940)
|.|+|.|.|..|..+..+.|.|. .||.+...+....+.+|+.++|.|.+.|.|.|.|+|++++..+. .+.++.+.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~-~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVV-KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE-EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred eEEEEEEEcCCCcEEEEEEEEec-CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 99999999999999999999988 67777777777888999999999999999999999998765443 34456666
Q ss_pred ecCe--EEEEeeeccCCCeEEEEEEEeCCCCcee
Q psy11143 280 HDGF--VLVLNGVRESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 280 ~~g~--sL~I~~v~~~DsG~YtC~A~N~~Gs~~~ 311 (940)
.+|. .+.|.++..+|+|.|+|.|.|..|....
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 6664 2556789999999999999999998765
No 151
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.83 E-value=1e-19 Score=188.35 Aligned_cols=168 Identities=15% Similarity=0.238 Sum_probs=132.6
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeCCCe-EEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCC
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ-MTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 307 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~G 307 (940)
.|.+...|....+.+|++++|.|.+.+.|.+. +.|+|+|..+.... .+|.|.+++.+|+|.|+|.|.|..
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~--------~~L~i~~v~~~D~G~Y~C~a~n~~- 77 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA--------SSYFIDAATVDDSGEYRCQTQLST- 77 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS--------SEEEESSCCGGGCEEEEEEETTSB-
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc--------cEEEEecccccCCEEEEEEeCCCc-
Confidence 35566667778899999999999999998875 99999999886543 459999999999999999998743
Q ss_pred CceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCc-CCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCC
Q psy11143 308 SAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQD 386 (940)
Q Consensus 308 s~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D 386 (940)
.+..+.|.|. .+|.+...+. ..+.+|++++|.|.+.+. |.+.|.|+|+|..+.. ....++|.|.+++.+|
T Consensus 78 -~s~~~~l~V~--~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~-----~~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 78 -LSDPVQLEVH--IGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY-----FHHNSDFYIPKATLKD 148 (204)
T ss_dssp -CCCCEEEEEE--CSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-----EEECCCEEESSCCGGG
T ss_pred -ccccEEEEEe--cCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-----ccCCceEEECcCCccc
Confidence 3334455554 4566665554 678899999999999766 5579999999987632 2345689999999999
Q ss_pred CeEEEEEEEe-CCeeEEEEEEEEEecCCC
Q psy11143 387 SGLYRCTASN-LLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 387 ~G~YtC~A~N-~~G~~~~s~~L~V~~~~~ 414 (940)
+|.|+|.|.| ..+..+..+.|.|.+++.
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 149 SGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred CEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 9999999999 555666788899987654
No 152
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.83 E-value=1e-19 Score=189.07 Aligned_cols=177 Identities=16% Similarity=0.249 Sum_probs=130.5
Q ss_pred CCeeEEecC--CeEEEEEEEeeeCCCeEEEEEC---CeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 236 PVSTTYSTG--STSRITCLVEGHPLPQMTWFHD---GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 236 p~~~~v~~G--~~v~L~C~v~G~P~p~ItW~k~---g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
+....+.+| +++.|.|.+.+ |.+.++|++. +..+....++.....+ .|.|.++..+|+|.|+|.|.|..+...
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~-~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK-GFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT-EEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc-cEEEccCChhcCceEEEEEEECCeeEE
Confidence 467788999 99999999986 7799999884 6666655555544444 499999999999999999998544332
Q ss_pred e-EEEEEEeeccCCeEEEcCCc-eeecCCCeEEEEEeecCcCC--CeEEEEeCCeeeccCCc-E-E---------Eeeec
Q psy11143 311 S-VAMIRINGHRAPRLVVKPFD-MRAPAGSSVEIPCKPDGEPL--PRISWSKDEAEFVEDRN-H-K---------IHRTG 375 (940)
Q Consensus 311 ~-s~~l~V~~~~~P~i~~~p~~-~~v~~G~~vtL~C~v~g~P~--p~i~W~k~g~~i~~~~~-~-~---------i~~~~ 375 (940)
. ...|.|....+|.+...+.. +.+.+|++++|.|.+.|.|. +.|.|++++..+..... . . ....+
T Consensus 92 s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
T 2x1w_L 92 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLS 171 (213)
T ss_dssp CCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEE
T ss_pred EEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeE
Confidence 2 24566644345556555544 48999999999999998654 48999999875422111 0 0 12245
Q ss_pred eEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 376 SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 376 sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|.
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 172 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred EEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 799999999999999999999999999999999998754
No 153
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.82 E-value=2.7e-19 Score=186.48 Aligned_cols=170 Identities=21% Similarity=0.389 Sum_probs=142.7
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 123 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g 123 (940)
..+.+...|..+.+.+|+.+.|.|.+.+.|.+.|.|+|++..+... .+..|.|.+++.+|+|.|+|.+.|..+
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~n~~~ 89 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVNNNFT 89 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEECTTC
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-------CCCEEEEccCChhhCeEeEEEEEcCCC
Confidence 3578889999999999999999999999999999999999988654 245679999999999999999999877
Q ss_pred ceEE-EEEEEEeccc-------------CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEee
Q psy11143 124 SAES-VAMIRINGHR-------------APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR 189 (940)
Q Consensus 124 ~~~~-~~~L~V~~~~-------------~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~ 189 (940)
.... .+.|.|...+ .|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+....
T Consensus 90 ~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~------ 163 (218)
T 3k0w_A 90 FEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------ 163 (218)
T ss_dssp CEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC------
T ss_pred CceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC------
Confidence 6533 5667776431 2677778888899999999999999999999999999998876543
Q ss_pred eceEEEeecccCCCceEEEEEEcCCcc-eeeeeeeeec
Q psy11143 190 TGSLRLYNIGPQDSGLYRCTASNLLGE-DVAEGYLTVT 226 (940)
Q Consensus 190 ~~sL~I~~v~~~DsG~YtC~a~N~~g~-~s~s~~L~V~ 226 (940)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 164 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 164 KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 347999999999999999999998887 5556667666
No 154
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=5.9e-19 Score=177.95 Aligned_cols=163 Identities=22% Similarity=0.397 Sum_probs=130.3
Q ss_pred eEEecCCeEEEEEEEeeeCCC--eEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEE
Q psy11143 239 TTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIR 316 (940)
Q Consensus 239 ~~v~~G~~v~L~C~v~G~P~p--~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~ 316 (940)
..+.+|+.++|.|.+.+.|.| .+.|++++..+....... ....|.|. +.+|+|.|+|.|.|. ....+.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~---~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~ 79 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG---QKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQ 79 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC---SEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC---CcEEEEEe--chhhCeEEEEEEECC---cCcEEEEE
Confidence 467889999999999998877 999999999887554321 12236555 689999999999983 23455566
Q ss_pred EeeccCCeEEEcCCceeecCCCeEEEEEeecCcC-CCeEEEEe---CCee-ecc--CCcEEEeeec---eEEEecCC-CC
Q psy11143 317 INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEP-LPRISWSK---DEAE-FVE--DRNHKIHRTG---SLRLYNIG-PQ 385 (940)
Q Consensus 317 V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P-~p~i~W~k---~g~~-i~~--~~~~~i~~~~---sL~I~~v~-~~ 385 (940)
|. .+|.+...+....+.+|++++|.|.+.|.| .|.|.|++ ++.. +.. ..++.+...+ +|.|.++. .+
T Consensus 80 V~--~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~ 157 (184)
T 3b5h_A 80 LH--GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 157 (184)
T ss_dssp EC--CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTT
T ss_pred Ee--cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccc
Confidence 64 688888888778899999999999999999 79999999 4543 332 2566665544 89999999 99
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 386 DSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 386 D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
|+|.|+|.|.|..|....++.|.|++
T Consensus 158 d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 158 DPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp SSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCceEEEEEEeCCCcceEEEEEEEec
Confidence 99999999999999999999998864
No 155
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.82 E-value=3.5e-20 Score=190.44 Aligned_cols=175 Identities=19% Similarity=0.320 Sum_probs=134.7
Q ss_pred CCCeeEEecCCeEEEEEEEeeeC----CCeEEEEE----------------CCeecCC-----CCceEEee-----cCeE
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHP----LPQMTWFH----------------DGNSLDS-----DDHVTYEH-----DGFV 284 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P----~p~ItW~k----------------~g~~l~~-----~~~~~~~~-----~g~s 284 (940)
.+....+.+|++++|.|.+.+.| .+.+.|++ ++..+.. ..+..+.. ...+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34567889999999999999877 46999998 4444432 33444433 2345
Q ss_pred EEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeCC--e
Q psy11143 285 LVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDE--A 361 (940)
Q Consensus 285 L~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~g--~ 361 (940)
|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+ .|.|.|.|.|++++ .
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~ 163 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV--KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQ 163 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC--CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEc--CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCC
Confidence 99999999999999999999988877777777753 4554443444457899999999999 89999999999954 3
Q ss_pred eeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 362 EFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 362 ~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
.+.... ......++|.|.++..+|+|.|+|.|.|..|....++.|.|..|
T Consensus 164 ~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 164 TMPTPW-LAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCCGGG-GGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred ccCccc-eeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 332221 11223568999999999999999999999999999999988754
No 156
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.82 E-value=1.3e-19 Score=193.07 Aligned_cols=199 Identities=18% Similarity=0.294 Sum_probs=122.5
Q ss_pred cccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCC-----CCeEEEeeCC--ee
Q psy11143 106 VRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEP-----LPRISWSKDE--AE 178 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P-----~p~ItW~k~g--~~ 178 (940)
++.+|+|.|+|.|. |.......+.+. ..+.+...+....+.+|++++|.|.+.+.| .+.+.|++++ ..
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~--~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~ 85 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWL--RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQS 85 (254)
T ss_dssp --------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhee--eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCC
Confidence 78999999999998 433333333332 256677778889999999999999999987 4899999832 22
Q ss_pred cc------------ccCceEEeee---ceEEEeecccCCCceEEEEEEcCCccee-eeeeeeecC--CCCeeeeCCCeeE
Q psy11143 179 FV------------EDRNHKIHRT---GSLRLYNIGPQDSGLYRCTASNLLGEDV-AEGYLTVTG--APPIFIQRPVSTT 240 (940)
Q Consensus 179 i~------------~~~~~~~~~~---~sL~I~~v~~~DsG~YtC~a~N~~g~~s-~s~~L~V~~--~~p~~~~~p~~~~ 240 (940)
+. ...++..... .+|.|.+++.+|+|.|+|.+.|..+... ....+.|.. .+|.+...+....
T Consensus 86 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~ 165 (254)
T 2c1o_A 86 PKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSE 165 (254)
T ss_dssp CEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHH
T ss_pred ceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChh
Confidence 20 1234444333 3799999999999999999998765422 223455542 2455555444333
Q ss_pred EecCCeEEEEEEEeee-CC-CeEEEEECCeecCCCC--ceEE--eec-----CeEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 241 YSTGSTSRITCLVEGH-PL-PQMTWFHDGNSLDSDD--HVTY--EHD-----GFVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 241 v~~G~~v~L~C~v~G~-P~-p~ItW~k~g~~l~~~~--~~~~--~~~-----g~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
...|+.++|.|.+.|. |+ +.|+|+|+|..+.... .... ..+ ...|.|.++..+|+|.|+|.|.|.....
T Consensus 166 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 166 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 4468899999999985 44 3699999999886551 1111 011 2359999999999999999999987764
No 157
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.82 E-value=6.3e-20 Score=187.80 Aligned_cols=168 Identities=18% Similarity=0.245 Sum_probs=127.9
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEe-ecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE-HDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~-~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
.+|.+...|.. .+.+|++++|.|.+.+ |.+.+.|+|++..+......... ..+..|.|.+++.+|+|.|+|.|.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 34566666665 7889999999999998 77899999999887643221111 233469999999999999999999998
Q ss_pred CC--ceeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcE----EEeeeceEEE
Q psy11143 307 GS--AESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNH----KIHRTGSLRL 379 (940)
Q Consensus 307 Gs--~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~----~i~~~~sL~I 379 (940)
|. .+..+.|.|... .+|.+...+.. .+.+|++++|.|.+.+. .+.+.|+|+|..+...... .....+.|.|
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 159 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPM 159 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEe
Confidence 83 344556666543 35666666553 67899999999999874 4699999999876543322 1234568999
Q ss_pred ecCCCCCCeEEEEEEEeCCe
Q psy11143 380 YNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 380 ~~v~~~D~G~YtC~A~N~~G 399 (940)
.+++.+|+|.|+|.|.|..+
T Consensus 160 ~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 160 SPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CSCCGGGCEEEEEEEECGGG
T ss_pred CCCcccCCCeEEEEEEcCCC
Confidence 99999999999999999886
No 158
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.82 E-value=1e-19 Score=186.26 Aligned_cols=168 Identities=18% Similarity=0.258 Sum_probs=128.1
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE-eeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE-HDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~-~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|.. .|.+|++++|.|.+.+ +.+.+.|+|+|..+......... .....|.|.+++.+|+|.|+|.|.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 46788888877 8999999999999988 67899999999877532111111 234568999999999999999999988
Q ss_pred Cc--eEEEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCce----EEeeeceEEE
Q psy11143 123 GS--AESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNH----KIHRTGSLRL 195 (940)
Q Consensus 123 g~--~~~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~----~~~~~~sL~I 195 (940)
|. ....+.|.|.... .|.+...+.. .+.+|++++|.|.+.+ +.+.+.|++++..+...... .....+.|.|
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 159 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPM 159 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEe
Confidence 73 2335667776543 4555555543 7889999999999987 44689999998876543221 1234567999
Q ss_pred eecccCCCceEEEEEEcCCc
Q psy11143 196 YNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 196 ~~v~~~DsG~YtC~a~N~~g 215 (940)
.+++.+|+|.|+|.|.|..+
T Consensus 160 ~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 160 SPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CSCCGGGCEEEEEEEECGGG
T ss_pred CCCcccCCCeEEEEEEcCCC
Confidence 99999999999999999876
No 159
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.82 E-value=1.5e-20 Score=192.65 Aligned_cols=179 Identities=19% Similarity=0.374 Sum_probs=136.8
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeec------------CCCCceEEeecCeEEEEeeeccCCCe
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSL------------DSDDHVTYEHDGFVLVLNGVRESDAG 296 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l------------~~~~~~~~~~~g~sL~I~~v~~~DsG 296 (940)
+..+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.... .+|.|.++..+|+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP--TGITFKSVTREDTG 81 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET--TEEECSCCCTTSCS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec--cEEEEeeCCHHHCc
Confidence 344556677788999999999999999999999999987652 1223344332 56999999999999
Q ss_pred EEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeCCeeeccCCc-------
Q psy11143 297 VYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRN------- 368 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~g~~i~~~~~------- 368 (940)
.|+|.+.|..|....+..+.+.+..+|.+...+....+.+|+.++|.|.+ .+.|.|.|.|++++..+.....
T Consensus 82 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 161 (209)
T 1nbq_A 82 TYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSN 161 (209)
T ss_dssp EEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTT
T ss_pred EEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeec
Confidence 99999999977444434444444456766555556678899999999997 8999999999999987765432
Q ss_pred --EEEe-eeceEEEecCCCCCCeEEEEEEEeCCeeEEEE--EEEEE
Q psy11143 369 --HKIH-RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE--GYLTV 409 (940)
Q Consensus 369 --~~i~-~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s--~~L~V 409 (940)
+.+. ..++|.|.++..+|+|.|+|.|.|..|....+ +.|.|
T Consensus 162 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 162 SSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred cceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 1221 34689999999999999999999999988444 44444
No 160
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.81 E-value=2.8e-19 Score=183.68 Aligned_cols=174 Identities=16% Similarity=0.231 Sum_probs=133.8
Q ss_pred CCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecC-------------------CCCceEEeecCeEEEEeeeccCCCe
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLD-------------------SDDHVTYEHDGFVLVLNGVRESDAG 296 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~-------------------~~~~~~~~~~g~sL~I~~v~~~DsG 296 (940)
+....+.+|+++.|.|.+.+.|.+.+.|++++.... ...+..+..++. |.|.+++.+|+|
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~-L~i~~v~~~D~G 84 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGS-LLFQMITMKDMG 84 (208)
T ss_dssp EESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSC-EEECSCCGGGCE
T ss_pred CccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCe-EEEccccccCCe
Confidence 344678899999999998888999999999754221 122344444444 999999999999
Q ss_pred EEEEEEEeCC-CCceeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeee
Q psy11143 297 VYNCVAQNSE-GSAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT 374 (940)
Q Consensus 297 ~YtC~A~N~~-Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~ 374 (940)
.|+|.+.|.. +.......|.|.... .|.+...+.. +.+|++++|.|.+.+.| |.|.|++++..+..+.++.+...
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~ 161 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQN 161 (208)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETT
T ss_pred EEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCC
Confidence 9999999985 444556666665432 3555554443 88999999999999977 89999999999887777776654
Q ss_pred -ceEEEecCCCCCCeEEEEEEEeCCeeEEE-EEEEEEecCC
Q psy11143 375 -GSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTGEN 413 (940)
Q Consensus 375 -~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~~L~V~~~~ 413 (940)
++|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..++
T Consensus 162 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 162 NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred CCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 68999999999999999999999998665 5666666554
No 161
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=184.62 Aligned_cols=180 Identities=21% Similarity=0.321 Sum_probs=140.7
Q ss_pred CeEEeCCCcEEEecCCeEEEEEE-eeccCC-CeEEEEECCEeecC--CCCeEEEeeceEEEEcccccCCCeEEEEEEEeC
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCL-VEGHPL-PQMTWFHDGNSLDS--DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~-v~g~P~-p~V~W~kdg~~I~~--~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
+.....+..+.+.+|+.+.|.|. +.+.|. +.|.|+|++..+.. .........+..|.|.+++.+|+|.|+|.+.+.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 88 (201)
T 3s97_C 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP 88 (201)
T ss_dssp CCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEG
T ss_pred ccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEec
Confidence 33344567889999999999999 888888 99999999987742 233333344556899999999999999999997
Q ss_pred CCceEE---EEEEEEecc-----cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceE
Q psy11143 122 EGSAES---VAMIRINGH-----RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSL 193 (940)
Q Consensus 122 ~g~~~~---~~~L~V~~~-----~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL 193 (940)
.+.... ...+.+... .+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.... ......+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~-~~~~~~~~L 167 (201)
T 3s97_C 89 SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA-EISTSGAVL 167 (201)
T ss_dssp GGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC-EEETTTTEE
T ss_pred CCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce-eecCCCCEE
Confidence 766554 233333211 23456666667889999999999999999999999999998776442 222345689
Q ss_pred EEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 194 RLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 168 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 168 KIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 999999999999999999999999888888875
No 162
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.81 E-value=5.1e-19 Score=177.76 Aligned_cols=167 Identities=14% Similarity=0.222 Sum_probs=132.2
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCe-EEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ-MTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
.+|.+...+....+.+|+.++|.|.+.+.|.+. +.|++++..+.. .+.+|.|.++..+|+|.|+|.+.|..
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~~~n~~ 77 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS--------QASSYFIDAATVNDSGEYRCQTNLST 77 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES--------SCSEEEESSCCGGGCEEEEEECSSSC
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC--------CceEEEEeCCCcccCEEEEEEeeCCc
Confidence 456667777777899999999999999998776 889999987753 23459999999999999999999865
Q ss_pred CCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCC-eEEEEeCCeeeccCCcEEEeeeceEEEecCCCC
Q psy11143 307 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQ 385 (940)
Q Consensus 307 Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p-~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~ 385 (940)
++ ....+.|. .+|.+... ....+.+|+.++|.|.+.+.|.+ .|.|+|+|..+.. ....+.|.|.+++.+
T Consensus 78 ~s--~~~~l~V~--~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-----~~~~~~L~i~~v~~~ 147 (175)
T 1fnl_A 78 LS--DPVQLEVH--IGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-----FHHNSDFHIPKATLK 147 (175)
T ss_dssp CC--CCEEEEEE--CSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-----EEECCCEEESSCCGG
T ss_pred cc--ccEEEEEe--CCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-----CCCCCEEEEcccChh
Confidence 53 34455565 34444443 44678899999999999988765 9999999987732 234578999999999
Q ss_pred CCeEEEEEEEeCCee-EEEEEEEEEecC
Q psy11143 386 DSGLYRCTASNLLGE-DVAEGYLTVTGE 412 (940)
Q Consensus 386 D~G~YtC~A~N~~G~-~~~s~~L~V~~~ 412 (940)
|+|.|+|.|.|..|. .+..+.|.|.++
T Consensus 148 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 148 DSGSYFCRGLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred hCeEEEEEEEcCCCCccCccEEEEEeCC
Confidence 999999999997664 555777888753
No 163
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.81 E-value=4e-20 Score=189.52 Aligned_cols=179 Identities=17% Similarity=0.325 Sum_probs=134.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEee----------cCCCCeEEEeeceEEEEcccccCCCeEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSL----------DSDDHVTYEHDGFVLVLNGVRESDAGVY 114 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I----------~~~~~~~~~~~gs~L~I~~v~~~DsG~Y 114 (940)
++.+...|....+.+|+++.|.|.+.+.|.+.|.|+|++..+ ......++...+..|.|.+++.+|+|.|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y 83 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTY 83 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEE
Confidence 456677788889999999999999999999999999987652 1111112222236689999999999999
Q ss_pred EEEEEeCCCceEE--EEEEEEecccCCeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeeccccCce------
Q psy11143 115 NCVAQNSEGSAES--VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRNH------ 185 (940)
Q Consensus 115 tC~a~n~~g~~~~--~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~~~~~~------ 185 (940)
+|.+.+..|.... ...|.|.. +|.+...+.+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 84 ~C~~~~~~g~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 161 (209)
T 1nbq_A 84 TCMVSEEGGNSYGEVKVKLIVLV--PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSN 161 (209)
T ss_dssp EEEEEETTSSCEECCEEECCEEB--CCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTT
T ss_pred EEEEecCCCCccceEEEEEEEec--CCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeec
Confidence 9999998764444 44455543 4444444555678899999999997 89999999999999877653321
Q ss_pred ---EE-eeeceEEEeecccCCCceEEEEEEcCCcceee--eeeeee
Q psy11143 186 ---KI-HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA--EGYLTV 225 (940)
Q Consensus 186 ---~~-~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~--s~~L~V 225 (940)
.. ...+.|.|.+++.+|+|.|+|.|.|..|.... .+.|.|
T Consensus 162 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 162 SSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred cceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 11 13457999999999999999999999998744 444444
No 164
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.81 E-value=2.3e-19 Score=182.17 Aligned_cols=161 Identities=18% Similarity=0.203 Sum_probs=126.5
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeC
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
+..+|.+...|.. .+.+|++++|.|.+.+ |.+.+.|+|+|.. ....+..|.|.+++.+|+|.|+|.+.|.
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc--------ccCcccEEEECcCChhhCceEEEEEEcC
Confidence 3457888888775 7999999999999988 7789999999875 1234556799999999999999999998
Q ss_pred CCceE--EEEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeec
Q psy11143 122 EGSAE--SVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNI 198 (940)
Q Consensus 122 ~g~~~--~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v 198 (940)
.|... ..+.|.|... ..|.+...+ ...+.+|++++|.|.+.+.| +.+.|++++..+..... .....+.|.|.++
T Consensus 75 ~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~-~~~~~~~L~i~~v 151 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP-ERWYRASFPIITV 151 (184)
T ss_dssp TEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC-CEEEEESSSEEEE
T ss_pred CCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec-CCCceEEEEEccC
Confidence 76322 3466676553 345666665 56788999999999987655 69999999987765322 2334568999999
Q ss_pred ccCCCceEEEEEEcCCc
Q psy11143 199 GPQDSGLYRCTASNLLG 215 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~g 215 (940)
+.+|+|.|+|.|.|..+
T Consensus 152 ~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 152 TAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TTCCSEEEEEEEECTTS
T ss_pred CccCCeEEEEEEEeCCC
Confidence 99999999999999754
No 165
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=185.90 Aligned_cols=168 Identities=16% Similarity=0.221 Sum_probs=116.3
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCe-EEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV-TYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~-~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|.. .+.+|++|+|.|.+.+.|. .|.|+|+|..+...... .....+..|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 56888888774 7899999999999988776 99999999876432110 011334568999999999999999999987
Q ss_pred CceE--EEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCce-EE----eeeceEE
Q psy11143 123 GSAE--SVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNH-KI----HRTGSLR 194 (940)
Q Consensus 123 g~~~--~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~-~~----~~~~sL~ 194 (940)
|... ..+.|.|.... .|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|++..+...... .. ...+.|.
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~ 159 (196)
T 2d3v_A 82 GWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFP 159 (196)
T ss_dssp EECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEE
T ss_pred CcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEE
Confidence 6433 35667776533 45554443 35788999999999999988 899999999876432111 11 1236899
Q ss_pred EeecccCCCceEEEEEEcCCc
Q psy11143 195 LYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 195 I~~v~~~DsG~YtC~a~N~~g 215 (940)
|.+++.+|+|.|+|.|.|..+
T Consensus 160 I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 160 VGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp CCCCBTTBCEEEEEEEEETTE
T ss_pred eeecCcccCeeEEEEEEccCC
Confidence 999999999999999998754
No 166
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.81 E-value=2.9e-19 Score=183.30 Aligned_cols=173 Identities=14% Similarity=0.253 Sum_probs=128.7
Q ss_pred CCCeeEEecCCeEEEEEEEeeeCC-----CeEEEEE-CCeecCCCCceEEeec-----CeEEEEeeeccCCCeEEEEEEE
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHPL-----PQMTWFH-DGNSLDSDDHVTYEHD-----GFVLVLNGVRESDAGVYNCVAQ 303 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P~-----p~ItW~k-~g~~l~~~~~~~~~~~-----g~sL~I~~v~~~DsG~YtC~A~ 303 (940)
.+....+.+|+++.|.|.+.+.|. +.+.|+| ++.......+..+..+ ..+|.|.+++.+|+|.|+|.|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 445678899999999999999886 8999999 5554444555555443 2569999999999999999999
Q ss_pred eCCCCceeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeee---ceEEE
Q psy11143 304 NSEGSAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT---GSLRL 379 (940)
Q Consensus 304 N~~Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~---~sL~I 379 (940)
|..+.....+.|.|.... .|.+.. ..+.+|+.++|.|.+.|.|.|.|.|++++..+.. ....... ..+.|
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSV 161 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEE
T ss_pred eCCCcceEEEEEEecCCCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEE
Confidence 999877777777776422 222221 2457899999999999999999999998875432 1111112 24667
Q ss_pred ecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 380 YNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 380 ~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
..+..+|.|.|+|.|.|..|....++.|.|.++.
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 7899999999999999999999999988886653
No 167
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=3.3e-19 Score=188.47 Aligned_cols=176 Identities=15% Similarity=0.256 Sum_probs=130.4
Q ss_pred eCCCeeEEecCCeEEEEEEEee---eCCCeEEEEECCeecC------------------------------CCCceEEee
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEG---HPLPQMTWFHDGNSLD------------------------------SDDHVTYEH 280 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G---~P~p~ItW~k~g~~l~------------------------------~~~~~~~~~ 280 (940)
..+....+.+|++++|.|.+.+ .|.+.|.|++++.... ...+..+..
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 3455778899999999999998 8889999999875431 112222222
Q ss_pred c-CeEEEEeeeccCCCeEEEEEEEeCCCCc-----eeEEEEEEeecc-CCeEEE-cCCceeecCCCeEEEEEeecCcCCC
Q psy11143 281 D-GFVLVLNGVRESDAGVYNCVAQNSEGSA-----ESVAMIRINGHR-APRLVV-KPFDMRAPAGSSVEIPCKPDGEPLP 352 (940)
Q Consensus 281 ~-g~sL~I~~v~~~DsG~YtC~A~N~~Gs~-----~~s~~l~V~~~~-~P~i~~-~p~~~~v~~G~~vtL~C~v~g~P~p 352 (940)
+ ..+|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|.... +|.+.. .+....+.+|++++|.|.+.+.|.|
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 1 2359999999999999999999988754 346666665431 344443 3445677889999999999999999
Q ss_pred eEEEEeCCeeeccC------------------------CcEEEeeeceEEEecCCCCCCeEEEEEEEe---CCeeEEEEE
Q psy11143 353 RISWSKDEAEFVED------------------------RNHKIHRTGSLRLYNIGPQDSGLYRCTASN---LLGEDVAEG 405 (940)
Q Consensus 353 ~i~W~k~g~~i~~~------------------------~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N---~~G~~~~s~ 405 (940)
.|.|+|++..+... .+......++|.|.+++.+|+|.|+|.|.| ..|....++
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 99999998766432 112222336899999999999999999999 666667666
Q ss_pred EEEE
Q psy11143 406 YLTV 409 (940)
Q Consensus 406 ~L~V 409 (940)
.|.|
T Consensus 247 ~l~V 250 (250)
T 2fbo_J 247 ILKV 250 (250)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 6654
No 168
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.80 E-value=2.8e-19 Score=187.34 Aligned_cols=181 Identities=15% Similarity=0.170 Sum_probs=132.1
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEE-Eeece--EEEEcccccCCCeEEEEEEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTY-EHDGF--VLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~-~~~gs--~L~I~~v~~~DsG~YtC~a~ 119 (940)
..+|.+...|. ..+.+|++|+|.|.+.+ +.+.|.|+|+|..+........ ..++. .|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 35788888887 57899999999999987 6789999999876643221111 12333 67999999999999999999
Q ss_pred eCCCceEE--EEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEe
Q psy11143 120 NSEGSAES--VAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLY 196 (940)
Q Consensus 120 n~~g~~~~--~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~ 196 (940)
|..+.... ...|.|.+. +.|.+...+ ...+.+|++++|.|.+.+.|.+.+.|+|+|..+... .......+.|.|.
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~~~~~~~~~L~I~ 162 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-HQSGEHPANFSLG 162 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-EEECSSSEEEECC
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-ccCCCccCEEEEc
Confidence 98764433 456666653 345665555 567899999999997777788899999999876542 1112235679999
Q ss_pred ecccCCCceEEEEEEcCCc-----ceeeeeeeeecC
Q psy11143 197 NIGPQDSGLYRCTASNLLG-----EDVAEGYLTVTG 227 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g-----~~s~s~~L~V~~ 227 (940)
+++.+|+|.|+|.|.|... ..+..+.|.|..
T Consensus 163 ~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 163 PVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp SCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred cCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 9999999999999998532 233445566653
No 169
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.80 E-value=4.9e-19 Score=181.86 Aligned_cols=177 Identities=18% Similarity=0.295 Sum_probs=136.7
Q ss_pred ecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccc-------------------cCceEEeeeceEEEeecccCCC
Q psy11143 143 VKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE-------------------DRNHKIHRTGSLRLYNIGPQDS 203 (940)
Q Consensus 143 ~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~-------------------~~~~~~~~~~sL~I~~v~~~Ds 203 (940)
+.+.+..+.+|++++|.|.+.+.+.+.+.|++++..... ..+..+..+++|.|.+++.+|+
T Consensus 4 i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~ 83 (208)
T 3r4d_A 4 IEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDM 83 (208)
T ss_dssp EEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGC
T ss_pred ccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCC
Confidence 344456788999999999988888899999986542211 2233444456899999999999
Q ss_pred ceEEEEEEcCC-cceeeeeeeeecCCC--CeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEee
Q psy11143 204 GLYRCTASNLL-GEDVAEGYLTVTGAP--PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH 280 (940)
Q Consensus 204 G~YtC~a~N~~-g~~s~s~~L~V~~~~--p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~ 280 (940)
|.|+|.+.+.. +.......|.|...+ |.+...+.. +..|+.+.|.|.+.+.| |.+.|++++..+....++.+..
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~ 160 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQ 160 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEET
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcC
Confidence 99999999984 556667777776432 444444433 88999999999999976 7999999999999888888877
Q ss_pred cCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCC
Q psy11143 281 DGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAP 323 (940)
Q Consensus 281 ~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P 323 (940)
.+.+|.|.++..+|+|.|+|.|.|..|..... .+.+.+..+|
T Consensus 161 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~-~~~l~v~~~~ 202 (208)
T 3r4d_A 161 NNSILRIDPIKREDAGEYQCEISNPVSVRRSN-SIKLDIIFDP 202 (208)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEECTTCCEECC-CEEECCC---
T ss_pred CCCEEEEeccCHHhCeEEEEEEecCCCcccCC-ceeeeEEeCC
Confidence 76779999999999999999999999987643 3455443444
No 170
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.80 E-value=9.4e-19 Score=180.89 Aligned_cols=172 Identities=17% Similarity=0.147 Sum_probs=126.0
Q ss_pred eEEecCCeEEEEEEEeeeCCCeEEEEECC-eecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEE
Q psy11143 239 TTYSTGSTSRITCLVEGHPLPQMTWFHDG-NSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 239 ~~v~~G~~v~L~C~v~G~P~p~ItW~k~g-~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V 317 (940)
..+.+|+.++|.|.+.|.|.|.|.|++.. ..+ .........+..|.|.+++.+|+|.|+|.|.|..|..+..+.|.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V 88 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEE
Confidence 34459999999999999999999999843 222 122222333445999999999999999999999887777777777
Q ss_pred eeccCCeEEEcCCceeecCCCeEEEEEeecCcCC---CeEEEEeCCeeeccCCcE-------EEeeeceEEEecCCCCCC
Q psy11143 318 NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL---PRISWSKDEAEFVEDRNH-------KIHRTGSLRLYNIGPQDS 387 (940)
Q Consensus 318 ~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~---p~i~W~k~g~~i~~~~~~-------~i~~~~sL~I~~v~~~D~ 387 (940)
.. .|+.+...+. ..+.+|+.++|.|.+.|.|+ +.|+|+|++..+...... .......|.|.....+|.
T Consensus 89 ~~-~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~ 166 (202)
T 1vca_A 89 YS-FPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166 (202)
T ss_dssp EB-CCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTT
T ss_pred Ee-CCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCC
Confidence 64 2222333333 56889999999999998643 379999999877532110 011234578888888899
Q ss_pred eEEEEEEEeCCee-------EEEEEEEEEecCCC
Q psy11143 388 GLYRCTASNLLGE-------DVAEGYLTVTGENS 414 (940)
Q Consensus 388 G~YtC~A~N~~G~-------~~~s~~L~V~~~~~ 414 (940)
|.|+|.|.|..|. .+.+..|.|..+|.
T Consensus 167 g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 167 KVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 9999999999886 45677888887653
No 171
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.80 E-value=4.3e-19 Score=184.33 Aligned_cols=175 Identities=17% Similarity=0.252 Sum_probs=129.0
Q ss_pred CCCcEEEecC--CeEEEEEEeeccCCCeEEEEEC---CEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCce
Q psy11143 51 RPVSTTYSTG--STSRITCLVEGHPLPQMTWFHD---GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSA 125 (940)
Q Consensus 51 ~p~~~~V~eG--esv~L~C~v~g~P~p~V~W~kd---g~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~ 125 (940)
+|..+.+.+| +.++|.|.+.+ |.+.|+|+++ +..+.......+...+ .|.|.+++.+|+|.|+|.|.|..+..
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~-~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK-GFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT-EEEEEGGGTTTCSEEEEEEC----CE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc-cEEEccCChhcCceEEEEEEECCeeE
Confidence 4578899999 99999999986 7789999884 6666655444444333 46999999999999999999855443
Q ss_pred EE-EEEEEEecccCCeeEecCCc-eeecCCCcEEEEEEeCCCC--CCeEEEeeCCeeccccCc-e-E---------Eeee
Q psy11143 126 ES-VAMIRINGHRAPRLVVKPFD-MRAPAGSSVEIPCKPDGEP--LPRISWSKDEAEFVEDRN-H-K---------IHRT 190 (940)
Q Consensus 126 ~~-~~~L~V~~~~~P~~~~~p~~-~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~g~~i~~~~~-~-~---------~~~~ 190 (940)
.+ ...|.|.....|.+...+.. ..+.+|++++|.|.+.|.| .+.+.|++++..+..... . . ....
T Consensus 91 ~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (213)
T 2x1w_L 91 QSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 170 (213)
T ss_dssp ECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEE
T ss_pred EEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeee
Confidence 33 25666654334555555544 4899999999999999854 458999998876432111 0 0 2224
Q ss_pred ceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC
Q psy11143 191 GSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 227 (940)
Q Consensus 191 ~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~ 227 (940)
++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 171 ~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 171 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEec
Confidence 4799999999999999999999999999999999883
No 172
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.80 E-value=2.2e-19 Score=184.10 Aligned_cols=168 Identities=14% Similarity=0.237 Sum_probs=122.3
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCe-EEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV-TYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~-~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|.. .+.+|++++|.|.+.+.|. .|.|+|+|..+...... .....+..|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 46788877774 7999999999999998776 79999999876421111 111334567999999999999999999987
Q ss_pred -C--ceEEEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCce-EEe----eeceE
Q psy11143 123 -G--SAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNH-KIH----RTGSL 193 (940)
Q Consensus 123 -g--~~~~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~-~~~----~~~sL 193 (940)
| .....+.|.|...+ .|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|++..+...... ... ..+.|
T Consensus 82 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L 159 (198)
T 1ugn_A 82 AGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIF 159 (198)
T ss_dssp TEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEE
T ss_pred CCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEE
Confidence 4 22345667776633 45555444 4678899999999999988 7799999998876432211 111 13689
Q ss_pred EEeecccCCCceEEEEEEcCCc
Q psy11143 194 RLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~a~N~~g 215 (940)
.|.+++.+|+|.|+|.|.|..+
T Consensus 160 ~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 160 SVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EECCCCTTSCEEEEEEEECTTS
T ss_pred EecccCcccCeEEEEEEEeCCC
Confidence 9999999999999999999765
No 173
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.80 E-value=4e-19 Score=178.55 Aligned_cols=169 Identities=18% Similarity=0.206 Sum_probs=130.9
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCC-eEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLP-QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p-~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
.+|.+...+....+.+|++++|.|.+.+.|.+ .+.|++++..+... +.+|.|.+++.+|+|.|+|.+.|..
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~~~~~~ 74 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET--------NSSLNIVNAKFEDSGEYKCQHQQVN 74 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC--------SSEEEECSCCGGGCEEEEEECTTSS
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC--------ceEEEEeccceecCEEEEEEcCCcc
Confidence 35666777777889999999999999998876 79999999987643 3459999999999999999999866
Q ss_pred CCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeec-CcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCC
Q psy11143 307 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQ 385 (940)
Q Consensus 307 Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~-g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~ 385 (940)
++. .+.+.|. .++.+... ....+.+|++++|.|.+. +.|.+.+.|+++|..+... ...+.|.|.++..+
T Consensus 75 ~s~--~~~l~V~--~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-----~~~~~L~i~~v~~~ 144 (176)
T 1f2q_A 75 ESE--PVYLEVF--SDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-----YENHNISITNATVE 144 (176)
T ss_dssp CCC--CEEEEEE--CSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-----CCSSEEEESSCCGG
T ss_pred ccc--cEEEEEe--CcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-----cCCCeEEECCCCcc
Confidence 544 3455554 34444433 345788999999999995 6677799999999887422 13568999999999
Q ss_pred CCeEEEEEEEeCCe-eEEEEEEEEEecCCC
Q psy11143 386 DSGLYRCTASNLLG-EDVAEGYLTVTGENS 414 (940)
Q Consensus 386 D~G~YtC~A~N~~G-~~~~s~~L~V~~~~~ 414 (940)
|+|.|+|.|.|..| ..+..+.|.|..+|.
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999999755 445568899988753
No 174
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.80 E-value=9.3e-19 Score=180.93 Aligned_cols=181 Identities=16% Similarity=0.190 Sum_probs=127.0
Q ss_pred EecCCcee-ecCCCcEEEEEEeCCCCCCeEEEeeCC-eeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceee
Q psy11143 142 VVKPFDMR-APAGSSVEIPCKPDGEPLPRISWSKDE-AEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA 219 (940)
Q Consensus 142 ~~~p~~~~-v~~Ge~vtL~C~v~g~P~p~ItW~k~g-~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~ 219 (940)
.+.|.+.. +.+|++++|.|.+.|.|.|.+.|++.. ..+. .........+.|.|.+++.+|+|.|+|.|.|..+..+.
T Consensus 4 ~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 4 ETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN-GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS-SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc-ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 34444444 459999999999999999999999843 2221 11111112346999999999999999999999888888
Q ss_pred eeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCC---CeEEEEECCeecCCCCceE------EeecCeEEEEeee
Q psy11143 220 EGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPL---PQMTWFHDGNSLDSDDHVT------YEHDGFVLVLNGV 290 (940)
Q Consensus 220 s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~---p~ItW~k~g~~l~~~~~~~------~~~~g~sL~I~~v 290 (940)
.+.|.|...+......+. ..+.+|+.++|.|.+.|.++ ++|+|+|++..+....... .......|.|...
T Consensus 83 ~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~ 161 (202)
T 1vca_A 83 GIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPV 161 (202)
T ss_dssp EEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCC
T ss_pred EEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEee
Confidence 888999855544444333 66889999999999998643 3799999998875321100 0111223678888
Q ss_pred ccCCCeEEEEEEEeCCCCce-----eEEEEEEeeccCCe
Q psy11143 291 RESDAGVYNCVAQNSEGSAE-----SVAMIRINGHRAPR 324 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs~~-----~s~~l~V~~~~~P~ 324 (940)
..+|.|.|+|+|.|..+... ....+.+.+.++|.
T Consensus 162 ~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 162 IEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp GGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 88999999999999987632 33344444446664
No 175
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.80 E-value=1.4e-18 Score=174.59 Aligned_cols=165 Identities=13% Similarity=0.229 Sum_probs=129.8
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCe-EEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQ-MTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~-V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|....+.+|+.++|.|.+.+.|.+. +.|+|+|..+.. ....|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~~~n~~ 77 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS--------QASSYFIDAATVNDSGEYRCQTNLST 77 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES--------SCSEEEESSCCGGGCEEEEEECSSSC
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC--------CceEEEEeCCCcccCEEEEEEeeCCc
Confidence 467888888888999999999999999988765 889999988763 34467999999999999999999855
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCC-eEEEeeCCeeccccCceEEeeeceEEEeecccC
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQ 201 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~ 201 (940)
+. ....|.|. ..+. ...+....+.+|+.++|.|.+.+.+++ .+.|++++..+.. ......|.|.+++.+
T Consensus 78 ~s--~~~~l~V~--~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-----~~~~~~L~i~~v~~~ 147 (175)
T 1fnl_A 78 LS--DPVQLEVH--IGWL-LLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-----FHHNSDFHIPKATLK 147 (175)
T ss_dssp CC--CCEEEEEE--CSSE-EEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-----EEECCCEEESSCCGG
T ss_pred cc--ccEEEEEe--CCCc-eeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-----CCCCCEEEEcccChh
Confidence 53 34455554 2333 333445678899999999999987665 9999999987732 224568999999999
Q ss_pred CCceEEEEEEcCCcc-eeeeeeeeec
Q psy11143 202 DSGLYRCTASNLLGE-DVAEGYLTVT 226 (940)
Q Consensus 202 DsG~YtC~a~N~~g~-~s~s~~L~V~ 226 (940)
|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 148 d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 148 DSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred hCeEEEEEEEcCCCCccCccEEEEEe
Confidence 999999999997554 4555666664
No 176
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.80 E-value=2.6e-19 Score=183.50 Aligned_cols=179 Identities=14% Similarity=0.188 Sum_probs=126.9
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCc-eEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH-VTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~-~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
.+|.+...|. ..+.+|++++|.|.+.+.|. .+.|+|+|..+..... ......+..|.|.++..+|+|.|+|.|.|..
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 4566666565 47889999999999998875 7999999987742111 1112234569999999999999999999987
Q ss_pred -C--CceeEEEEEEee-ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCc-EEEe----eeceE
Q psy11143 307 -G--SAESVAMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRN-HKIH----RTGSL 377 (940)
Q Consensus 307 -G--s~~~s~~l~V~~-~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~-~~i~----~~~sL 377 (940)
| ..+..+.|.|.. ..+|.+...+ ...+.+|++++|.|.+.+. .+.|.|+|+|..+..... .... ..+.|
T Consensus 82 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L 159 (198)
T 1ugn_A 82 AGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIF 159 (198)
T ss_dssp TEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEE
T ss_pred CCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEE
Confidence 5 334556677765 2356666554 3578899999999999988 789999999987643321 1111 13689
Q ss_pred EEecCCCCCCeEEEEEEEeCCeeE-----EEEEEEEEe
Q psy11143 378 RLYNIGPQDSGLYRCTASNLLGED-----VAEGYLTVT 410 (940)
Q Consensus 378 ~I~~v~~~D~G~YtC~A~N~~G~~-----~~s~~L~V~ 410 (940)
.|.+++.+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 160 ~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 160 SVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 999999999999999999987622 344555554
No 177
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.80 E-value=2.4e-19 Score=181.99 Aligned_cols=159 Identities=18% Similarity=0.226 Sum_probs=124.3
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 307 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~G 307 (940)
.+|.+...+.. .+.+|++++|.|.+.+ |.+.+.|+|+|.. ....+..|.|.++..+|+|.|+|.|.|..|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 76 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSL 76 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc--------ccCcccEEEECcCChhhCceEEEEEEcCCC
Confidence 45666666654 7899999999999988 7889999999875 122344699999999999999999999876
Q ss_pred Cc--eeEEEEEEee-ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCC
Q psy11143 308 SA--ESVAMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGP 384 (940)
Q Consensus 308 s~--~~s~~l~V~~-~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~ 384 (940)
.. +..+.|.|.. ..+|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+..... .....+.|.|.+++.
T Consensus 77 ~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~-~~~~~~~L~i~~v~~ 153 (184)
T 2gi7_A 77 WSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP-ERWYRASFPIITVTA 153 (184)
T ss_dssp EBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC-CEEEEESSSEEEETT
T ss_pred ccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec-CCCceEEEEEccCCc
Confidence 33 3345666654 2467777666 45788999999999988665 69999999987654322 233466899999999
Q ss_pred CCCeEEEEEEEeCCe
Q psy11143 385 QDSGLYRCTASNLLG 399 (940)
Q Consensus 385 ~D~G~YtC~A~N~~G 399 (940)
+|+|.|+|.|.|..+
T Consensus 154 ~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 154 AHSGTYRCYSFSSRD 168 (184)
T ss_dssp CCSEEEEEEEECTTS
T ss_pred cCCeEEEEEEEeCCC
Confidence 999999999999754
No 178
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.79 E-value=1e-18 Score=180.92 Aligned_cols=166 Identities=18% Similarity=0.259 Sum_probs=130.6
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCe-EEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPR-ISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~-ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
+.|.+...|....+.+|++++|.|.+.+.|.+. +.|++++..+.... +.|.|.+++.+|+|.|+|.+.|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-------~~L~i~~v~~~D~G~Y~C~a~n~-- 76 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-------SSYFIDAATVDDSGEYRCQTQLS-- 76 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-------SEEEESSCCGGGCEEEEEEETTS--
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-------cEEEEecccccCCEEEEEEeCCC--
Confidence 456777888778899999999999999988775 99999998876542 68999999999999999999874
Q ss_pred ceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeee-CCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCC
Q psy11143 216 EDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESD 294 (940)
Q Consensus 216 ~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~D 294 (940)
..+..+.|.|. .++.+...+. ..+.+|+.++|.|.+.+. |.+.++|+|+|..+.. ...+..|.|.++..+|
T Consensus 77 ~~s~~~~l~V~-~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~------~~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 77 TLSDPVQLEVH-IGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY------FHHNSDFYIPKATLKD 148 (204)
T ss_dssp BCCCCEEEEEE-CSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE------EEECCCEEESSCCGGG
T ss_pred cccccEEEEEe-cCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec------ccCCceEEECcCCccc
Confidence 44556677777 3444444443 778899999999999765 5689999999987632 2233459999999999
Q ss_pred CeEEEEEEEeC-CCCceeEEEEEEee
Q psy11143 295 AGVYNCVAQNS-EGSAESVAMIRING 319 (940)
Q Consensus 295 sG~YtC~A~N~-~Gs~~~s~~l~V~~ 319 (940)
+|.|+|.|.|. .+..+..+.|.|..
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (204)
T 3sgj_C 149 SGSYFCRGLVGSKNVSSETVQITITQ 174 (204)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEEEeCCCceecCcEEEEEeC
Confidence 99999999994 34444556666654
No 179
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.79 E-value=3.1e-19 Score=183.27 Aligned_cols=174 Identities=20% Similarity=0.291 Sum_probs=130.8
Q ss_pred cCCceeecCCCcEEEEEEeCCCC----CCeEEEeeC----------------Ceeccc-----cCceEEee------ece
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGEP----LPRISWSKD----------------EAEFVE-----DRNHKIHR------TGS 192 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~P----~p~ItW~k~----------------g~~i~~-----~~~~~~~~------~~s 192 (940)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+++ +..+.. ..+..+.. +.+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34566788999999999999876 469999983 322221 22333322 457
Q ss_pred EEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEE-eeeCCCeEEEEECCeecC
Q psy11143 193 LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLV-EGHPLPQMTWFHDGNSLD 271 (940)
Q Consensus 193 L~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v-~G~P~p~ItW~k~g~~l~ 271 (940)
|.|.+++.+|+|.|+|.+.|..+..+..+.|.|.. +|.+...+....+..|+.+.|.|.+ .|.|.|.++|++++....
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~ 164 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV-KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQT 164 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEc-CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCc
Confidence 99999999999999999999998888888899884 4444333344457889999999999 899999999999643322
Q ss_pred CCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 272 SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 272 ~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
..........+.+|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 165 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 165 MPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp CCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred cCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 22121222233469999999999999999999999999877777664
No 180
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=4.4e-20 Score=206.88 Aligned_cols=198 Identities=21% Similarity=0.265 Sum_probs=154.8
Q ss_pred CCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccC-ceEEe
Q psy11143 110 DAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR-NHKIH 188 (940)
Q Consensus 110 DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~-~~~~~ 188 (940)
+.|.|+|.+.+.... +.+..-.+|.+...+....+.+|+++.|.|.+.|.|.+.+.|++++..+.... .....
T Consensus 136 ~~~~~~C~~~~~l~~------l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~ 209 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH------MPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGL 209 (347)
T ss_dssp GGGCCCCSSSSCSSC------CCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCS
T ss_pred cccCCCCCCChHHhc------CCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceec
Confidence 578999988762221 11223346788888888999999999999999999999999999887653321 12233
Q ss_pred eeceEEEeecccCCCc-eEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC
Q psy11143 189 RTGSLRLYNIGPQDSG-LYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG 267 (940)
Q Consensus 189 ~~~sL~I~~v~~~DsG-~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g 267 (940)
..++|.|.+++.+|+| .|+|.|.|..|..+..+.|.|. .+|.+ ....+.+|+.++|.|.+.|.|.|.|+|+++|
T Consensus 210 ~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~-~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g 284 (347)
T 2ifg_A 210 PSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS-FPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNG 284 (347)
T ss_dssp SEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCB-EEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETT
T ss_pred ccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEc-CCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCC
Confidence 4568999999999999 9999999999988888888887 44443 1223457999999999999999999999999
Q ss_pred eecCCCCceEEe--e-------cCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 268 NSLDSDDHVTYE--H-------DGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 268 ~~l~~~~~~~~~--~-------~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
..+......... . ...+|.|.++..+|+|.|+|.|.|..|..+.++.+.|.
T Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 285 SVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred EECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 999865543321 1 13359999999999999999999999988877766664
No 181
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.79 E-value=2.6e-19 Score=183.40 Aligned_cols=169 Identities=15% Similarity=0.217 Sum_probs=116.2
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCce-EEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV-TYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~-~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
.+|.+...|. ..+.+|++++|.|.+.+.|. .+.|+|++..+...... .....+..|.|.++..+|+|.|+|.|.|..
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 3456666565 47889999999999988765 99999999877532111 112234569999999999999999999987
Q ss_pred CCce--eEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcE-EE----eeeceEE
Q psy11143 307 GSAE--SVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNH-KI----HRTGSLR 378 (940)
Q Consensus 307 Gs~~--~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~-~i----~~~~sL~ 378 (940)
|... ..+.|.|... .+|.+...+ ...+.+|++++|.|.+.+.| +.|.|+|+|..+...... .. ...++|.
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~ 159 (196)
T 2d3v_A 82 GWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFP 159 (196)
T ss_dssp EECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEE
T ss_pred CcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEE
Confidence 6443 4456666542 256665544 35788999999999999999 999999999876432111 11 1236899
Q ss_pred EecCCCCCCeEEEEEEEeCCee
Q psy11143 379 LYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 379 I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
|.+++.+|+|.|+|.|.|..+.
T Consensus 160 I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 160 VGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp CCCCBTTBCEEEEEEEEETTEE
T ss_pred eeecCcccCeeEEEEEEccCCC
Confidence 9999999999999999998764
No 182
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.79 E-value=4e-19 Score=178.50 Aligned_cols=167 Identities=19% Similarity=0.234 Sum_probs=128.0
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCC-eEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEe
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLP-QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p-~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
|..+|.+...|....+.+|++++|.|.+.+.|.+ .+.|++++..+.. .+..|.|.+++.+|+|.|+|.+.|
T Consensus 1 v~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 1 VPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE--------TNSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp ---CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC--------CSSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC--------CceEEEEeccceecCEEEEEEcCC
Confidence 3457888889999899999999999999988775 7999999998763 245679999999999999999987
Q ss_pred CCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeeccccCceEEeeeceEEEeecc
Q psy11143 121 SEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 199 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~ 199 (940)
..+.. .+.|.|. ..+ +...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... .++.|.|.+++
T Consensus 73 ~~~s~--~~~l~V~--~~~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-----~~~~L~i~~v~ 142 (176)
T 1f2q_A 73 VNESE--PVYLEVF--SDW-LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY-----ENHNISITNAT 142 (176)
T ss_dssp SSCCC--CEEEEEE--CSS-EEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC-----CSSEEEESSCC
T ss_pred ccccc--cEEEEEe--Ccc-eeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec-----CCCeEEECCCC
Confidence 65543 3445554 233 33334456788999999999995 67777999999998774321 24689999999
Q ss_pred cCCCceEEEEEEcCCc-ceeeeeeeeec
Q psy11143 200 PQDSGLYRCTASNLLG-EDVAEGYLTVT 226 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g-~~s~s~~L~V~ 226 (940)
.+|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 143 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 143 VEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 9999999999999644 34556777776
No 183
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.79 E-value=3.6e-19 Score=186.49 Aligned_cols=181 Identities=15% Similarity=0.177 Sum_probs=131.4
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceE-EeecCe--EEEEeeeccCCCeEEEEEEEe
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVT-YEHDGF--VLVLNGVRESDAGVYNCVAQN 304 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~-~~~~g~--sL~I~~v~~~DsG~YtC~A~N 304 (940)
.+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....... ...++. .|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 85 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRI 85 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEc
Confidence 4566666666 57899999999999987 678999999987664322111 112233 699999999999999999999
Q ss_pred CCCCce--eEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEec
Q psy11143 305 SEGSAE--SVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYN 381 (940)
Q Consensus 305 ~~Gs~~--~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~ 381 (940)
..|... ....|.|... .+|.+...+ ...+.+|++++|.|.+.+.|.+.+.|+|+|..+... .......+.|.|.+
T Consensus 86 ~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~~~~~~~~~L~I~~ 163 (218)
T 1uct_A 86 GHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-HQSGEHPANFSLGP 163 (218)
T ss_dssp TTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-EEECSSSEEEECCS
T ss_pred CCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-ccCCCccCEEEEcc
Confidence 876433 3355666542 356676666 457899999999997777888999999999876542 22223456899999
Q ss_pred CCCCCCeEEEEEEEeCCe-----eEEEEEEEEEecC
Q psy11143 382 IGPQDSGLYRCTASNLLG-----EDVAEGYLTVTGE 412 (940)
Q Consensus 382 v~~~D~G~YtC~A~N~~G-----~~~~s~~L~V~~~ 412 (940)
++.+|+|.|+|.|.|..+ ..+..+.|.|.+.
T Consensus 164 v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 164 VDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp CCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 999999999999998632 2334566777664
No 184
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.79 E-value=5.5e-19 Score=181.18 Aligned_cols=177 Identities=17% Similarity=0.211 Sum_probs=128.4
Q ss_pred ecCCceeecCCCcEEEEEEeCCCCC-----CeEEEee-CCeeccccCceEEee------eceEEEeecccCCCceEEEEE
Q psy11143 143 VKPFDMRAPAGSSVEIPCKPDGEPL-----PRISWSK-DEAEFVEDRNHKIHR------TGSLRLYNIGPQDSGLYRCTA 210 (940)
Q Consensus 143 ~~p~~~~v~~Ge~vtL~C~v~g~P~-----p~ItW~k-~g~~i~~~~~~~~~~------~~sL~I~~v~~~DsG~YtC~a 210 (940)
..+..+.+.+|+++.|.|.+.+.|. +.+.|++ ++.......+..+.. ..+|.|.+++.+|+|.|+|.+
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEE
Confidence 3445678899999999999999876 7899999 444433344444433 257999999999999999999
Q ss_pred EcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecC--eEEEEe
Q psy11143 211 SNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLN 288 (940)
Q Consensus 211 ~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g--~sL~I~ 288 (940)
.|..+..+..+.|.|...+..... ....+.+|+.+.|.|.+.|+|.|.|+|++++..+.. ......++ ..+.|.
T Consensus 87 ~~~~~~~~~~~~l~V~~~~~~p~~--~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~ 162 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKASYMRIDT--RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVL 162 (202)
T ss_dssp EETTEEEEEEEEEEEEBCCCCEEE--EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEE
T ss_pred EeCCCcceEEEEEEecCCCCcccE--EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEE
Confidence 999888888888888743211111 112456799999999999999999999998876532 12222233 346788
Q ss_pred eeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCC
Q psy11143 289 GVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAP 323 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P 323 (940)
.+..+|.|.|+|.|.|..|....++.|.|.....|
T Consensus 163 ~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~~p 197 (202)
T 3bp6_B 163 RLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRMEP 197 (202)
T ss_dssp EECCCTTCCEEEEEEETTTTEEEEEEECC------
T ss_pred EEEcCCCCEEEEEEEcCCcccccEEEEEecCcCCC
Confidence 99999999999999999999988888777554333
No 185
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.79 E-value=9e-19 Score=176.95 Aligned_cols=160 Identities=17% Similarity=0.247 Sum_probs=127.3
Q ss_pred eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCC--------------CCceEEee-----cCeEEEEeeeccCCCeEE
Q psy11143 238 STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS--------------DDHVTYEH-----DGFVLVLNGVRESDAGVY 298 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~--------------~~~~~~~~-----~g~sL~I~~v~~~DsG~Y 298 (940)
...+.+|++++|.|.+.+.|.+.+.|++++..+.. ..+..... ...+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45788999999999999999999999999863211 12222221 133499999999999999
Q ss_pred EEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEE
Q psy11143 299 NCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLR 378 (940)
Q Consensus 299 tC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~ 378 (940)
+|.+.|..+ .+.+.|.. +.. +....+.+|++++|.|.+.+.|.|.+.|++++..+ ....++|.
T Consensus 84 ~C~~~~~~~----~~~l~V~~-----~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~~L~ 146 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG-----LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGKTLS 146 (184)
T ss_dssp EEEETTEEE----EEEEEEEE-----EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE-------EEESSEEE
T ss_pred EEEEEcCCC----cEEEEEEE-----ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc-------ccCceEEE
Confidence 999988754 34455542 222 44457899999999999999999999999987654 23567899
Q ss_pred EecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 379 LYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 379 I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
|.+++.+|+|.|+|.|.|..|..+.++.|.|.+.|.
T Consensus 147 i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 147 VSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred EecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 999999999999999999999999999999998753
No 186
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.79 E-value=9.1e-19 Score=185.03 Aligned_cols=175 Identities=15% Similarity=0.259 Sum_probs=127.0
Q ss_pred eCCCcEEEecCCeEEEEEEeec---cCCCeEEEEECCEeec------------------------------CCCCeEEEe
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEG---HPLPQMTWFHDGNSLD------------------------------SDDHVTYEH 96 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g---~P~p~V~W~kdg~~I~------------------------------~~~~~~~~~ 96 (940)
..+..+.+.+|+.++|.|.+.+ .|.+.|.|+|++.... ...+..+..
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 3445788999999999999987 7888999999875420 011121111
Q ss_pred -eceEEEEcccccCCCeEEEEEEEeCCCce-----EEEEEEEEeccc-CCeeEe-cCCceeecCCCcEEEEEEeCCCCCC
Q psy11143 97 -DGFVLVLNGVRESDAGVYNCVAQNSEGSA-----ESVAMIRINGHR-APRLVV-KPFDMRAPAGSSVEIPCKPDGEPLP 168 (940)
Q Consensus 97 -~gs~L~I~~v~~~DsG~YtC~a~n~~g~~-----~~~~~L~V~~~~-~P~~~~-~p~~~~v~~Ge~vtL~C~v~g~P~p 168 (940)
....|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|...+ +|.+.. .+....+.+|+.+.|.|.+.+.|.|
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 12358999999999999999999987753 346777776642 233333 3445778899999999999999999
Q ss_pred eEEEeeCCeeccccC------------------------ceEEeeeceEEEeecccCCCceEEEEEEcCCc---ceeeee
Q psy11143 169 RISWSKDEAEFVEDR------------------------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLG---EDVAEG 221 (940)
Q Consensus 169 ~ItW~k~g~~i~~~~------------------------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g---~~s~s~ 221 (940)
.|+|++++..+.... +......+.|.|.+++.+|+|.|+|.|.|..| ....++
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 999999887664321 11111336899999999999999999999555 444444
Q ss_pred eee
Q psy11143 222 YLT 224 (940)
Q Consensus 222 ~L~ 224 (940)
.|.
T Consensus 247 ~l~ 249 (250)
T 2fbo_J 247 ILK 249 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 187
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.1e-18 Score=177.85 Aligned_cols=166 Identities=16% Similarity=0.194 Sum_probs=123.3
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC-CeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD-HVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~-~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|.. .+.+|++|+|.|.+.+. .+.+.|+|+|..+.... .......+..|.|.+++.+|+|.|+|.+.|..
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 36788888877 79999999999999764 46899999998764211 11111334568999999999999999999865
Q ss_pred Cce--EEEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecc
Q psy11143 123 GSA--ESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 199 (940)
Q Consensus 123 g~~--~~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~ 199 (940)
+.. ...+.|.|.+.. .|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|++..+... .......+.|.|.+++
T Consensus 81 ~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~-~~~~~~~~~L~I~~v~ 157 (188)
T 1oll_A 81 LWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ-RGYGKVQAEFPLGPVT 157 (188)
T ss_dssp EECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEE-EEECSSEEEEEEEECC
T ss_pred CCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCcccccc-ccCCCceeEEEECCCC
Confidence 432 235667776533 46666555 4568899999999998764 5689999998766541 1112235689999999
Q ss_pred cCCCceEEEEEEcCC
Q psy11143 200 PQDSGLYRCTASNLL 214 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~ 214 (940)
.+|+|.|+|.|.|..
T Consensus 158 ~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 158 TAHRGTYRCFGSYNN 172 (188)
T ss_dssp GGGCEEEEEECEEET
T ss_pred cCCCcEEEEEEEcCC
Confidence 999999999999864
No 188
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.78 E-value=8.5e-19 Score=177.10 Aligned_cols=154 Identities=12% Similarity=0.163 Sum_probs=119.4
Q ss_pred eEEecCCeEEEEEEEee--eCCCeEEEEECCeecC----------CCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCC
Q psy11143 239 TTYSTGSTSRITCLVEG--HPLPQMTWFHDGNSLD----------SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 306 (940)
Q Consensus 239 ~~v~~G~~v~L~C~v~G--~P~p~ItW~k~g~~l~----------~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~ 306 (940)
+.+.+|++++|.|...+ .|.+.|.|+|++..+. ...++.+..++. |.|.+++.+|+|.|+|.|.|..
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gs-L~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD-LKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSC-EEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCc-EEEcccccccCEEEEEEEEeCC
Confidence 46778999999995433 5567999999986542 345666666666 9999999999999999999999
Q ss_pred CCc--eeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCC
Q psy11143 307 GSA--ESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 383 (940)
Q Consensus 307 Gs~--~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~ 383 (940)
|.. ...+.|.|.... .|.+.. .+.+++|.|.+.|.|.|.|.|+|+|..+..+.+ +.|..+.
T Consensus 85 g~~~~~~~~~l~V~~~~~~p~i~~--------~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~--------~~i~~~~ 148 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSKPMIYW--------ECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ--------KTMSYQW 148 (176)
T ss_dssp CCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEETTEEEEEESS--------SEEEEEC
T ss_pred CCEEEEEEEEEEEeCCCCCCEEEe--------cCCcEEEEEEecCCCCcEEEEEECCEECCCCCc--------EEEEEEE
Confidence 987 555666665422 233322 244699999999999999999999988754433 4455778
Q ss_pred CCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy11143 384 PQDSGLYRCTASNLLGEDVAEGYLTV 409 (940)
Q Consensus 384 ~~D~G~YtC~A~N~~G~~~~s~~L~V 409 (940)
.+|+|.|+|.|.|..|...+.+.|.+
T Consensus 149 ~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 149 TNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred ccCCeEEEEEEEecCCCceecccccC
Confidence 99999999999999999988877654
No 189
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=6.9e-19 Score=179.21 Aligned_cols=177 Identities=16% Similarity=0.176 Sum_probs=126.8
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC-ceEEeecCeEEEEeeeccCCCeEEEEEEEeCCC
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD-HVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 307 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~-~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~G 307 (940)
+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+.... .......+..|.|.+++.+|+|.|+|.+.|..+
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 4566666655 7899999999999875 346899999998764211 111112334599999999999999999998754
Q ss_pred Cc--eeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCC
Q psy11143 308 SA--ESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGP 384 (940)
Q Consensus 308 s~--~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~ 384 (940)
.. +..+.|.|... .+|.+...| ...+.+|++++|.|.+.+ +.+.+.|+|+|..+... .......++|.|.+++.
T Consensus 82 ~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~~~~~~~~~L~I~~v~~ 158 (188)
T 1oll_A 82 WSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ-RGYGKVQAEFPLGPVTT 158 (188)
T ss_dssp ECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE-EEECSSEEEEEEEECCG
T ss_pred CCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCcccccc-ccCCCceeEEEECCCCc
Confidence 33 34456666542 367777666 456889999999999876 45799999998766431 11223456899999999
Q ss_pred CCCeEEEEEEEeCCe---eEEEEEEEEEe
Q psy11143 385 QDSGLYRCTASNLLG---EDVAEGYLTVT 410 (940)
Q Consensus 385 ~D~G~YtC~A~N~~G---~~~~s~~L~V~ 410 (940)
+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 159 ~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 159 AHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp GGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 999999999999641 22334555554
No 190
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.78 E-value=2.6e-18 Score=176.12 Aligned_cols=178 Identities=13% Similarity=0.184 Sum_probs=131.3
Q ss_pred eCCCeeEEecCCeEEEEEEEeeeCCC---eEEEEECCeecCCCC------------------ceEEee-----cCeEEEE
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSLDSDD------------------HVTYEH-----DGFVLVL 287 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~P~p---~ItW~k~g~~l~~~~------------------~~~~~~-----~g~sL~I 287 (940)
..|..+.+..|++++|.|.+.+.|.+ .|+|+|++..+.... ++.... ...+|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 34667889999999999999998876 489999876543211 111111 1134999
Q ss_pred eeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCC
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR 367 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~ 367 (940)
.+++.+|+|.|+|.+.+..+.........+....++.....+....+..|+.+.+.|.+.|.|.|.|+|++++..+....
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc
Confidence 99999999999999998777655443333322234444445556678889999999999999999999999988765433
Q ss_pred cEEE----eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 368 NHKI----HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 368 ~~~i----~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
.... ...+.|.|.++..+|+|.|+|.|+|..|.....+.|.|..
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V 211 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHV 211 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCE
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEE
Confidence 2221 2245799999999999999999999999888777776643
No 191
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=9.5e-18 Score=169.04 Aligned_cols=162 Identities=22% Similarity=0.387 Sum_probs=126.9
Q ss_pred EEEecCCeEEEEEEeeccCCC--eEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEE
Q psy11143 55 TTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIR 132 (940)
Q Consensus 55 ~~V~eGesv~L~C~v~g~P~p--~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~ 132 (940)
..+.+|+.++|.|.+.+.|.+ .+.|+|+|..+...... .....|.|. +.+|+|.|+|.+.|.. ...+.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~---~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~l~ 79 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP---GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTANIQ 79 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC---CSEEEEEEC--GGGCCEEEEEEEESTT---SCEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc---CCcEEEEEe--chhhCeEEEEEEECCc---CcEEEEE
Confidence 567899999999999987777 99999999988754322 123345666 6999999999999832 2345566
Q ss_pred EecccCCeeEecCCceeecCCCcEEEEEEeCCCC-CCeEEEee---CCeecc-c--cCceEEeeec---eEEEeecc-cC
Q psy11143 133 INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEP-LPRISWSK---DEAEFV-E--DRNHKIHRTG---SLRLYNIG-PQ 201 (940)
Q Consensus 133 V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P-~p~ItW~k---~g~~i~-~--~~~~~~~~~~---sL~I~~v~-~~ 201 (940)
|. .+|.+...+....+.+|+.++|.|.+.+.| .+.+.|++ ++..+. . ..++.+...+ .|.|.+++ .+
T Consensus 80 V~--~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~ 157 (184)
T 3b5h_A 80 LH--GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 157 (184)
T ss_dssp EC--CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTT
T ss_pred Ee--cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccc
Confidence 64 456777777778899999999999999999 79999999 444332 2 2445444333 79999999 89
Q ss_pred CCceEEEEEEcCCcceeeeeeeeec
Q psy11143 202 DSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 202 DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
|+|.|+|.|.|..|.....+.|.|.
T Consensus 158 d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 158 DPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp SSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCceEEEEEEeCCCcceEEEEEEEe
Confidence 9999999999999998888888775
No 192
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.78 E-value=1.4e-18 Score=186.02 Aligned_cols=197 Identities=17% Similarity=0.297 Sum_probs=126.8
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEee---ccCCCeEEEEECCEeecCC------------------CCeEEEe----eceE
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVE---GHPLPQMTWFHDGNSLDSD------------------DHVTYEH----DGFV 100 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~---g~P~p~V~W~kdg~~I~~~------------------~~~~~~~----~gs~ 100 (940)
+.+...+..+.+.+|+.++|.|.+. +.|.+.|.|+|++...... .+..+.. ....
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4556677788999999999999997 6777899999966432211 2222211 1145
Q ss_pred EEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEe---CCCCCCeEEEeeCCe
Q psy11143 101 LVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP---DGEPLPRISWSKDEA 177 (940)
Q Consensus 101 L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v---~g~P~p~ItW~k~g~ 177 (940)
|.|.+++.+|+|.|+|.+.+..+.......+.+.+.+ ..|....+.+|++++|.|.+ .+.|.+.++|++++.
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~ 160 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSG 160 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECT
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCC
Confidence 7999999999999999999987665444444443321 23446778899999999999 678999999999432
Q ss_pred ec-ccc---------------------CceEE-----eeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCCC
Q psy11143 178 EF-VED---------------------RNHKI-----HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPP 230 (940)
Q Consensus 178 ~i-~~~---------------------~~~~~-----~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p 230 (940)
.. ... .+..+ ...++|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p 240 (268)
T 3mj6_A 161 SHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEF 240 (268)
T ss_dssp TCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC--
T ss_pred CCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCC
Confidence 11 100 01111 2345799999999999999999999999999999999977888
Q ss_pred eeeeCCCeeEEecCCeE
Q psy11143 231 IFIQRPVSTTYSTGSTS 247 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v 247 (940)
.+...|....+..|+.+
T Consensus 241 ~~~~~p~~~~~~~~q~~ 257 (268)
T 3mj6_A 241 QRTISPTPPTDKGQQGI 257 (268)
T ss_dssp -----------------
T ss_pred eeeeCCCCCCCCcceec
Confidence 88888887777777654
No 193
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.77 E-value=4.8e-18 Score=168.92 Aligned_cols=163 Identities=17% Similarity=0.286 Sum_probs=126.5
Q ss_pred CeeeeCCCeeEEecCCeEEEEEEEeeeC-CCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCC
Q psy11143 230 PIFIQRPVSTTYSTGSTSRITCLVEGHP-LPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGS 308 (940)
Q Consensus 230 p~~~~~p~~~~v~~G~~v~L~C~v~G~P-~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs 308 (940)
|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+++|..+..... .+.|.++..+|+|.|+|.+.|...+
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~--------~~~~~~~~~~d~G~Y~C~~~~~~~s 76 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ--------PSYRFKANNNDSGEYTCQTGQTSLS 76 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS--------SEEEEECCGGGCEEEEEEETTSBCC
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc--------ceEEEecccccCeEEEEEEeCCCce
Confidence 4555667777889999999999999987 579999999998875422 2678899999999999999975444
Q ss_pred ceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeec-CcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCC
Q psy11143 309 AESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDS 387 (940)
Q Consensus 309 ~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~-g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~ 387 (940)
. .+.|.|. .+|.+...+ ...+.+|++++|.|.+. +.|.+.+.|++++..+... ...+.|.|.++..+|+
T Consensus 77 ~--~~~l~v~--~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-----~~~~~L~i~~v~~~d~ 146 (170)
T 3ry4_A 77 D--PVHLTVL--FEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS-----HLDPTFSIPQANHSHS 146 (170)
T ss_dssp C--CEEEEEE--CCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE-----SSCCEEEESSCCGGGC
T ss_pred E--eEEEEEE--CCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc-----CCCCeEEEEeccccCC
Confidence 3 3455554 355444443 56788999999999995 5577899999999876421 2356899999999999
Q ss_pred eEEEEEEEeCCee-EEEEEEEEEe
Q psy11143 388 GLYRCTASNLLGE-DVAEGYLTVT 410 (940)
Q Consensus 388 G~YtC~A~N~~G~-~~~s~~L~V~ 410 (940)
|.|+|.|.|..|. .+..+.|.|+
T Consensus 147 G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 147 GDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEEeCcCccccccEEEEEC
Confidence 9999999999997 4445666653
No 194
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.77 E-value=3.9e-18 Score=174.81 Aligned_cols=177 Identities=14% Similarity=0.193 Sum_probs=129.7
Q ss_pred eCCCcEEEecCCeEEEEEEeeccCCC---eEEEEECCEeecCCC------------------CeEEE-----eeceEEEE
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSLDSDD------------------HVTYE-----HDGFVLVL 103 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P~p---~V~W~kdg~~I~~~~------------------~~~~~-----~~gs~L~I 103 (940)
..|..++|.+|++++|.|.+.+.|.+ .|+|+|++..+.... +..+. .....|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 45677889999999999999987765 489999875432111 11111 01234799
Q ss_pred cccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccC
Q psy11143 104 NGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR 183 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~ 183 (940)
.+++.+|+|.|+|.+.+..+.........+...+.+..........+..|+.+.+.|.+.+.|.|.|+|++++..+....
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc
Confidence 99999999999999998777655533333323333444555666778899999999999999999999999988775433
Q ss_pred ceE----EeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 184 NHK----IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 184 ~~~----~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
... ....+.|.|.++..+|+|.|+|.|+|..|..+..+.+.|.
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 222 1224579999999999999999999999987766666554
No 195
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.77 E-value=3.5e-18 Score=176.52 Aligned_cols=173 Identities=16% Similarity=0.263 Sum_probs=128.8
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--CeecC------------CCCceEEee--cCeEEEEeeeccCCC
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD------------SDDHVTYEH--DGFVLVLNGVRESDA 295 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l~------------~~~~~~~~~--~g~sL~I~~v~~~Ds 295 (940)
+...+ ...+.+|++++|.|.+.+.|.+.+.|+|. +.... ...++.+.. ...+|.|.+++.+|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDE 82 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhC
Confidence 33445 77899999999999999999999999983 22110 223444322 234599999999999
Q ss_pred eEEEEEEEeCCC---CceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CC-CeEEEEeCCeeeccCC-
Q psy11143 296 GVYNCVAQNSEG---SAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFVEDR- 367 (940)
Q Consensus 296 G~YtC~A~N~~G---s~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~-p~i~W~k~g~~i~~~~- 367 (940)
|.|+|.|.|..+ .......|.|.. ..+|.+...+....+.+|+.++|.|.+.|. |. +.|.|+|+|..+..+.
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 162 (213)
T 3mj8_L 83 ADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVK 162 (213)
T ss_dssp EEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcc
Confidence 999999999988 334445666653 257888777766666689999999999986 44 3999999999886421
Q ss_pred -------cEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 368 -------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 368 -------~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
.......+.|.|..+..+|.|.|+|.|.|..|....++
T Consensus 163 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 163 TTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp ECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 11112245699999999999999999999998776654
No 196
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.77 E-value=3.9e-18 Score=176.14 Aligned_cols=174 Identities=17% Similarity=0.265 Sum_probs=127.8
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEeec------------CCCCeEEE--eeceEEEEcccccCC
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD------------SDDHVTYE--HDGFVLVLNGVRESD 110 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I~------------~~~~~~~~--~~gs~L~I~~v~~~D 110 (940)
.+...| .+.+.+|++++|.|.+.+.|.+.|.|+|. +.... ...++.+. .....|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344555 78899999999999999999999999982 22110 12233332 223458999999999
Q ss_pred CeEEEEEEEeCCCc---eEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC-CeEEEeeCCeecccc-
Q psy11143 111 AGVYNCVAQNSEGS---AESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFVED- 182 (940)
Q Consensus 111 sG~YtC~a~n~~g~---~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p~ItW~k~g~~i~~~- 182 (940)
+|.|+|.|.+..+. ....+.|.|... .+|.+...+....+.+|+.++|.|.+.+. |+ +.|+|+++|..+...
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 161 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGV 161 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCc
Confidence 99999999998873 233566666633 35677777766666799999999999984 44 499999999887542
Q ss_pred -------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeee
Q psy11143 183 -------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 221 (940)
Q Consensus 183 -------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~ 221 (940)
........+.|.|.++..+|+|.|+|.|.|..+....++
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 162 KTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred ccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 111222345699999999999999999999887655443
No 197
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=1.4e-18 Score=176.89 Aligned_cols=146 Identities=18% Similarity=0.291 Sum_probs=113.7
Q ss_pred EEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEee-eccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 240 TYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNG-VRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 240 ~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~-v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
....|+++.|.|.+.+ |. .|+|+|+|..+... .+.+|.|.+ +..+|+|.|+|.|.|..|.......+.|.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~ 80 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVG 80 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 3467999999999987 44 49999999998764 223599999 99999999999999999986666655554
Q ss_pred eccCCeEEE------------------cC--Cc---eeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec
Q psy11143 319 GHRAPRLVV------------------KP--FD---MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG 375 (940)
Q Consensus 319 ~~~~P~i~~------------------~p--~~---~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~ 375 (940)
...+|.... .+ .. ..+.+|++++|.|.+ |.|.|+|+|+|..+..... ..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~----~~~ 153 (186)
T 1jbj_A 81 SADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA----TKN 153 (186)
T ss_dssp SCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC----CSS
T ss_pred cccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC----Ccc
Confidence 433332100 00 00 123499999999998 8899999999998864332 456
Q ss_pred eEEEecCCCCCCeEEEEEEEeCCeeE
Q psy11143 376 SLRLYNIGPQDSGLYRCTASNLLGED 401 (940)
Q Consensus 376 sL~I~~v~~~D~G~YtC~A~N~~G~~ 401 (940)
+|.|.++..+|+|.|+|.|.|..|..
T Consensus 154 ~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 154 TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999999999999999999976
No 198
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.76 E-value=5.5e-18 Score=171.14 Aligned_cols=156 Identities=12% Similarity=0.163 Sum_probs=119.6
Q ss_pred cEEEecCCeEEEEEEeec--cCCCeEEEEECCEeec----------CCCCeEEEeeceEEEEcccccCCCeEEEEEEEeC
Q psy11143 54 STTYSTGSTSRITCLVEG--HPLPQMTWFHDGNSLD----------SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 54 ~~~V~eGesv~L~C~v~g--~P~p~V~W~kdg~~I~----------~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+.+.+|+.|+|.|...+ .|.+.|.|+|++..|. ...+..+..+++ |.|.+++.+|+|.|+|.|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gs-L~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD-LKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSC-EEESSCCGGGCEEEEEEEEET
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCc-EEEcccccccCEEEEEEEEeC
Confidence 456789999999995433 5667999999997552 334555545555 799999999999999999999
Q ss_pred CCce--EEEEEEEEecccC-CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeec
Q psy11143 122 EGSA--ESVAMIRINGHRA-PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNI 198 (940)
Q Consensus 122 ~g~~--~~~~~L~V~~~~~-P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v 198 (940)
.|.. ...+.|.|..... |.+. ..+..++|.|.+.|.|.|.|+|++++..+....+ +.|.++
T Consensus 84 ~g~~~~~~~~~l~V~~~~~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~--------~~i~~~ 147 (176)
T 1hng_A 84 NGTRILNKALDLRILEMVSKPMIY--------WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ--------KTMSYQ 147 (176)
T ss_dssp TCCEEEEEEEEEEEECCCCCCEEE--------EETTTTEEEEECSSCSSCEEEEEETTEEEEEESS--------SEEEEE
T ss_pred CCCEEEEEEEEEEEeCCCCCCEEE--------ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc--------EEEEEE
Confidence 9986 4456666654322 2222 2345699999999999999999999987754432 455678
Q ss_pred ccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 199 GPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
..+|+|.|+|.|.|..|..+....|.+.
T Consensus 148 ~~~d~G~Y~C~a~N~~g~~~~~~~l~~~ 175 (176)
T 1hng_A 148 WTNLRAPFKCKAVNRVSQESEMEVVNCP 175 (176)
T ss_dssp CSCCSSCEEEEEEETTEEEEEEECCCCC
T ss_pred EccCCeEEEEEEEecCCCceecccccCC
Confidence 8999999999999999998888777653
No 199
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.76 E-value=9.3e-18 Score=166.86 Aligned_cols=163 Identities=17% Similarity=0.259 Sum_probs=125.6
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccC-CCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCC
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHP-LPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 123 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P-~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g 123 (940)
+|.+...|....+.+|+.+.|.|.+.+.| .+.+.|+|+|..+.... ..+.|.+++.+|+|.|+|.+.+...
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~--------~~~~~~~~~~~d~G~Y~C~~~~~~~ 75 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT--------QPSYRFKANNNDSGEYTCQTGQTSL 75 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC--------SSEEEEECCGGGCEEEEEEETTSBC
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc--------cceEEEecccccCeEEEEEEeCCCc
Confidence 46677788888899999999999999876 67999999999987542 2246788999999999999987544
Q ss_pred ceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCC
Q psy11143 124 SAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQD 202 (940)
Q Consensus 124 ~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~D 202 (940)
.. .+.|.|.. .+. ...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+... .....|.|.+++.+|
T Consensus 76 s~--~~~l~v~~--~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-----~~~~~L~i~~v~~~d 145 (170)
T 3ry4_A 76 SD--PVHLTVLF--EWL-VLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS-----HLDPTFSIPQANHSH 145 (170)
T ss_dssp CC--CEEEEEEC--CSE-EEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE-----SSCCEEEESSCCGGG
T ss_pred eE--eEEEEEEC--Cce-EecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc-----CCCCeEEEEeccccC
Confidence 33 44555554 333 3344456788999999999995 5677899999998876432 134579999999999
Q ss_pred CceEEEEEEcCCcc-eeeeeeeee
Q psy11143 203 SGLYRCTASNLLGE-DVAEGYLTV 225 (940)
Q Consensus 203 sG~YtC~a~N~~g~-~s~s~~L~V 225 (940)
+|.|+|.|.|..|. .+..+.|.|
T Consensus 146 ~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 146 SGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CEEEEEEEEeCcCccccccEEEEE
Confidence 99999999999886 444455544
No 200
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=3.8e-18 Score=183.50 Aligned_cols=217 Identities=17% Similarity=0.205 Sum_probs=127.7
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCe---EEEeeceEEEEcccccCCCeEEEEEEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV---TYEHDGFVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~---~~~~~gs~L~I~~v~~~DsG~YtC~a~ 119 (940)
..+|.+...|. ..|.+|++|+|.|.+.+ +.+.|.|+|+|..+...... ........|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 45678877776 67899999999999975 56799999998754311000 001233567999999999999999998
Q ss_pred eCCC-----ceEEEEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEE----ee
Q psy11143 120 NSEG-----SAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKI----HR 189 (940)
Q Consensus 120 n~~g-----~~~~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~----~~ 189 (940)
+... .....+.|.|.+. ..|.+...+. ..+.+|++++|.|.+.+.+ +.+.|+|+|..+........ ..
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~ 160 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTF 160 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCC
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCce
Confidence 6532 1223566777764 3456665554 4688999999999998754 68999999987654322111 12
Q ss_pred eceEEEeecccCCCceEEEEEEcCCc-----ceeeeeeeeecCCCCeeee-CCCeeEEecCCeEEEEEEEeeeCCCeEEE
Q psy11143 190 TGSLRLYNIGPQDSGLYRCTASNLLG-----EDVAEGYLTVTGAPPIFIQ-RPVSTTYSTGSTSRITCLVEGHPLPQMTW 263 (940)
Q Consensus 190 ~~sL~I~~v~~~DsG~YtC~a~N~~g-----~~s~s~~L~V~~~~p~~~~-~p~~~~v~~G~~v~L~C~v~G~P~p~ItW 263 (940)
+..|.|.+++ |+|.|+|.+.+... ..+..+.|.|... |.+.. .+.......|..+.|.|.+ |.+.+.|.|
T Consensus 161 ~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~-p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~ 236 (257)
T 1b6u_A 161 QADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN-PSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEED 236 (257)
T ss_dssp BEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC-C----------------------------------
T ss_pred eEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEecc-CCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHH
Confidence 4579999998 99999999997532 2345567777743 33332 2223345678899999754 667778889
Q ss_pred EECC
Q psy11143 264 FHDG 267 (940)
Q Consensus 264 ~k~g 267 (940)
...+
T Consensus 237 ~~~~ 240 (257)
T 1b6u_A 237 LNLD 240 (257)
T ss_dssp ----
T ss_pred hhhh
Confidence 7543
No 201
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.76 E-value=4.3e-18 Score=171.96 Aligned_cols=159 Identities=17% Similarity=0.246 Sum_probs=123.7
Q ss_pred CcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC--------------CCCeEEEe-----eceEEEEcccccCCCeE
Q psy11143 53 VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS--------------DDHVTYEH-----DGFVLVLNGVRESDAGV 113 (940)
Q Consensus 53 ~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~--------------~~~~~~~~-----~gs~L~I~~v~~~DsG~ 113 (940)
..+.+.+|++++|.|.+.+.|.+.|.|+|++..+.. ..+..... ....|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 356789999999999999999999999999863211 11122211 13348999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceE
Q psy11143 114 YNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSL 193 (940)
Q Consensus 114 YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL 193 (940)
|+|.+.+..+ .+.|.|.. +. .+....+.+|++++|.|.+.+.|.+.+.|++++..+ ....+.|
T Consensus 83 Y~C~~~~~~~----~~~l~V~~-----~~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~~L 145 (184)
T 2ny1_B 83 YICEVEDQKE----EVQLLVFG-----LT-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGKTL 145 (184)
T ss_dssp EEEEETTEEE----EEEEEEEE-----EE-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE-------EEESSEE
T ss_pred EEEEEEcCCC----cEEEEEEE-----ec-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc-------ccCceEE
Confidence 9999987644 34455542 12 244567889999999999999999999999987654 2345689
Q ss_pred EEeecccCCCceEEEEEEcCCcceeeeeeeeecCC
Q psy11143 194 RLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGA 228 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~ 228 (940)
.|.+++.+|+|.|+|.|.|..+..+..+.|.|...
T Consensus 146 ~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~ 180 (184)
T 2ny1_B 146 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF 180 (184)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEecCCcCCCeEEEEEEEECCceEEEEEEEEEEec
Confidence 99999999999999999999998888888888743
No 202
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.76 E-value=4.4e-18 Score=175.76 Aligned_cols=170 Identities=18% Similarity=0.305 Sum_probs=125.8
Q ss_pred eeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec------------CCCCceEEeecC--eEEEEeeeccCCCe
Q psy11143 233 IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL------------DSDDHVTYEHDG--FVLVLNGVRESDAG 296 (940)
Q Consensus 233 ~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l------------~~~~~~~~~~~g--~sL~I~~v~~~DsG 296 (940)
...|....+.+|+++.|.|.+.+.|.+.|.|+|++ ..+ ....++.....+ .+|.|.+++.+|+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3d9a_L 5 TQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG 84 (213)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCE
Confidence 44567788999999999999999998999999853 211 112345544332 36999999999999
Q ss_pred EEEEEEEeCCCCcee-EEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCeeeccCCcE---
Q psy11143 297 VYNCVAQNSEGSAES-VAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDRNH--- 369 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~~-s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~i~~~~~~--- 369 (940)
.|+|.|.|..+.... ...+.|... .+|.+...+.......|+.++|.|.+.| .|.+ .|+|+|+|..+......
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 164 (213)
T 3d9a_L 85 MYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWT 164 (213)
T ss_dssp EEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEEC
T ss_pred EEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCC
Confidence 999999998775432 335666542 3677776554444557899999999987 6666 89999999887654111
Q ss_pred -------EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEE
Q psy11143 370 -------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 370 -------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~ 402 (940)
.....++|.|.++..+|+|.|+|.|.|......
T Consensus 165 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 165 DQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred CccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 111244899999999999999999999877643
No 203
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.75 E-value=5e-18 Score=185.47 Aligned_cols=266 Identities=14% Similarity=0.173 Sum_probs=106.2
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCce
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSA 125 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~ 125 (940)
+.+.|+++.|.+|++++|+|.+....+..+.|.-. ...+... ......+.|.+++.+ |.|+|.+.......
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~-----g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~ 74 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLP-----GNNRKVYELSNVQED--SQPMCYSNCPDGQS 74 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCS-----CSSEEEEEEESCCSC--CCCEEEEECSSCEE
T ss_pred eEEeCCccEEcCCCeEEEEEeCCCCCCccceEEecCCCcccccC-----CCceEEEEEEecccC--CeEEEEEEcCCccE
Confidence 34557788999999999999996433335888531 1111000 011124688888743 56999997543333
Q ss_pred EEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCC-CCC--eEEEeeCCeeccccCceEEeeeceEEEeecccCC
Q psy11143 126 ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP--RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQD 202 (940)
Q Consensus 126 ~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p--~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~D 202 (940)
+..+.|.|...+. .+.+.+....+.+|+.++|.|.+.+. |.. +|+|+|++..+............+|.+.....++
T Consensus 75 ~~~v~l~V~~~P~-~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~ 153 (291)
T 1mq8_A 75 TAKTFLTVYWTPE-RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHH 153 (291)
T ss_dssp EEECEEEECBCCS-CCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCS
T ss_pred EEEEEEEEecCCC-CCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccC
Confidence 3455666655433 23333434558899999999999874 444 5899999987754321110122346665555566
Q ss_pred CceEEEEEEcCCcc--------eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCC---eEEEEECCeecC
Q psy11143 203 SGLYRCTASNLLGE--------DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSLD 271 (940)
Q Consensus 203 sG~YtC~a~N~~g~--------~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p---~ItW~k~g~~l~ 271 (940)
.+.|+|.|.|..+. .+....|.|...|+..........+.+|+.++|.|.+.|.|++ .|.|+++|..+.
T Consensus 154 g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~ 233 (291)
T 1mq8_A 154 GANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (291)
T ss_dssp SCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------------
T ss_pred CceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecC
Confidence 66999999987552 3455677787554332211112367889999999999997554 699999999887
Q ss_pred CCCceEEeecCeEEEEeee---cc--CCCeEEEEEEEeCCCCceeEEEEEEeeccCCeE
Q psy11143 272 SDDHVTYEHDGFVLVLNGV---RE--SDAGVYNCVAQNSEGSAESVAMIRINGHRAPRL 325 (940)
Q Consensus 272 ~~~~~~~~~~g~sL~I~~v---~~--~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i 325 (940)
... . .+|..+.+... .. ++.+.|+|.|.|.....+....|.|....+|.+
T Consensus 234 ~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~~~ 288 (291)
T 1mq8_A 234 PTV--T--YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNV 288 (291)
T ss_dssp -----------------------------------------------------------
T ss_pred cee--e--ecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCccE
Confidence 531 1 12333444433 23 335677899988666666667777765445543
No 204
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=7.9e-18 Score=173.86 Aligned_cols=171 Identities=18% Similarity=0.285 Sum_probs=125.5
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Eee----------c--CCCCeEEEee--ceEEEEcccccCCC
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL----------D--SDDHVTYEHD--GFVLVLNGVRESDA 111 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~I----------~--~~~~~~~~~~--gs~L~I~~v~~~Ds 111 (940)
+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+ . ...++..... ...|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 445577889999999999999999988899999853 211 1 1134444422 23689999999999
Q ss_pred eEEEEEEEeCCCceEE-EEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeeccccCc---
Q psy11143 112 GVYNCVAQNSEGSAES-VAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDRN--- 184 (940)
Q Consensus 112 G~YtC~a~n~~g~~~~-~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i~~~~~--- 184 (940)
|.|+|.+.|..+.... .+.|.|.... +|.+...+....+.+|+.++|.|.+.+ .|.+ .++|+++|..+.....
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 163 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW 163 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecC
Confidence 9999999998775433 3466765433 566666555444558999999999987 6665 8999999988765411
Q ss_pred -------eEEeeeceEEEeecccCCCceEEEEEEcCCccee
Q psy11143 185 -------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 185 -------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
......+.|.|.++..+|+|.|+|.|.|......
T Consensus 164 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 164 TDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred CCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 1112234799999999999999999999766543
No 205
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.75 E-value=8e-18 Score=180.10 Aligned_cols=177 Identities=16% Similarity=0.320 Sum_probs=127.5
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEe---eeCCCeEEEEECCeecCCC------------------CceEEee----cCeEE
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVE---GHPLPQMTWFHDGNSLDSD------------------DHVTYEH----DGFVL 285 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~---G~P~p~ItW~k~g~~l~~~------------------~~~~~~~----~g~sL 285 (940)
.+...+....+.+|++++|.|.+. +.|.+.|.|++++...... .+..+.. ...+|
T Consensus 7 ~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 86 (268)
T 3mj6_A 7 GLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSL 86 (268)
T ss_dssp -----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCE
T ss_pred ccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEE
Confidence 445566778899999999999987 6778899999976533221 2333321 11459
Q ss_pred EEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEee---cCcCCCeEEEEeCCee
Q psy11143 286 VLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP---DGEPLPRISWSKDEAE 362 (940)
Q Consensus 286 ~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v---~g~P~p~i~W~k~g~~ 362 (940)
.|.+++.+|+|.|+|.|.|..+.......+.+.+.. ..|....+.+|++++|.|.+ .+.|.|.|.|++++..
T Consensus 87 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~ 161 (268)
T 3mj6_A 87 LLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGS 161 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTT
T ss_pred EECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCC
Confidence 999999999999999999987666444444443311 13445678899999999999 6789999999994321
Q ss_pred e-c-----------------cC----CcEEE-----eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 363 F-V-----------------ED----RNHKI-----HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 363 i-~-----------------~~----~~~~i-----~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
. . .. .+..+ ...++|.|.++..+|+|.|+|.|.|..|....++.|.|...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 162 HTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp CSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 1 0 00 12222 23568999999999999999999999999999999999654
No 206
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.75 E-value=5.5e-18 Score=176.79 Aligned_cols=175 Identities=21% Similarity=0.323 Sum_probs=131.3
Q ss_pred eCCCeeEEecCCeEEEEEEEeeeCC-CeEEEEECCeecC-------------CCCceE----------EeecCeEEEEee
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGHPL-PQMTWFHDGNSLD-------------SDDHVT----------YEHDGFVLVLNG 289 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~P~-p~ItW~k~g~~l~-------------~~~~~~----------~~~~g~sL~I~~ 289 (940)
..|....+.+|+++.|.|.+.+.|. +.+.|++++.... ...++. +..++. |.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-L~i~~ 83 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGR-LVLAE 83 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCC-EEESS
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCce-EEEcc
Confidence 3466788999999999999999985 8999998654321 012222 444455 99999
Q ss_pred eccCCCeEEEEEEEeCC-CCceeEEEEEEeec-cCCeEEEcCCceeecCCCeE-EEEEee-cCcCCCeEEEEeCCeeecc
Q psy11143 290 VRESDAGVYNCVAQNSE-GSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSV-EIPCKP-DGEPLPRISWSKDEAEFVE 365 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~-Gs~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~v-tL~C~v-~g~P~p~i~W~k~g~~i~~ 365 (940)
++.+|+|.|+|.|.|.. +.....+.|.|... ..|.+...+....+.+|+.+ +|.|.+ .+.|.|.|.|++++..+..
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~ 163 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEV 163 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCC
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcc
Confidence 99999999999999987 77777777777642 23666666666778899988 999999 8999999999999998865
Q ss_pred CC----cEEEee------------eceEEEecCCCCCCeEEEEEEEe-----CCee-EEEEEEEEE
Q psy11143 366 DR----NHKIHR------------TGSLRLYNIGPQDSGLYRCTASN-----LLGE-DVAEGYLTV 409 (940)
Q Consensus 366 ~~----~~~i~~------------~~sL~I~~v~~~D~G~YtC~A~N-----~~G~-~~~s~~L~V 409 (940)
.. ++.+.. .+.|.|.....+|.|.|+|.|.| ..|. .+..+.|.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 164 PVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred ccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 54 444332 15688876666679999999999 5555 444444443
No 207
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.75 E-value=1.1e-17 Score=175.04 Aligned_cols=172 Identities=14% Similarity=0.233 Sum_probs=117.4
Q ss_pred CeeEEecCCeEEEEEEEeeeCCC---eEEEEECCeec-----------CC------CCceEEee-----cCeEEEEeeec
Q psy11143 237 VSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSL-----------DS------DDHVTYEH-----DGFVLVLNGVR 291 (940)
Q Consensus 237 ~~~~v~~G~~v~L~C~v~G~P~p---~ItW~k~g~~l-----------~~------~~~~~~~~-----~g~sL~I~~v~ 291 (940)
..+.+.+|++++|.|.+.+.+.+ .|.|+|++... .. ..+..... ...+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34678899999999999876655 79999876421 10 11222221 12469999999
Q ss_pred cCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecC-cCCCeEEEEeCCeeeccCC--c
Q psy11143 292 ESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFVEDR--N 368 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p~i~W~k~g~~i~~~~--~ 368 (940)
.+|+|.|+|.|.|..|..+....+.+.. .+...+....+.+|+.+.|.|.+.| .|.|.|+|+|++..+.... .
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~----~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~ 167 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAA----LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAP 167 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEB----CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecc----ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceE
Confidence 9999999999999887766554444432 2222233456778999999999998 5999999999765443222 2
Q ss_pred EEEeeece---EEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 369 HKIHRTGS---LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 369 ~~i~~~~s---L~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
.....++. +.+..++.+|+|.|+|.|+|..|....++.|.|.+|
T Consensus 168 ~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 168 VVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 22222332 345567889999999999999999999999888654
No 208
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.75 E-value=1.9e-17 Score=171.80 Aligned_cols=177 Identities=16% Similarity=0.268 Sum_probs=122.9
Q ss_pred CCCeeEEecCCeEEEEEEEeeeCC-----CeEEEEECCeec---------CC------CCceEEeec-----CeEEEEee
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHPL-----PQMTWFHDGNSL---------DS------DDHVTYEHD-----GFVLVLNG 289 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P~-----p~ItW~k~g~~l---------~~------~~~~~~~~~-----g~sL~I~~ 289 (940)
.+....+..|+++.|.|.+.+.|. +.+.|+|++..+ .. ..+..+..+ ..+|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 345567889999999999988774 389999975332 10 123333322 23699999
Q ss_pred eccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeC-CeeeccCCc
Q psy11143 290 VRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKD-EAEFVEDRN 368 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~-g~~i~~~~~ 368 (940)
++.+|+|.|+|.|.| .+.....+.|.|.. +|..........+.+|+.++|.|.+.|.|.|.|.|+++ +..+.....
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~--~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNA--PYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEB--CCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEEC--CCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc
Confidence 999999999999999 56666666676653 33222111123577899999999999999999999998 555443322
Q ss_pred EEE--eeeceEE---EecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 369 HKI--HRTGSLR---LYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 369 ~~i--~~~~sL~---I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
... ..++.+. +..+..+|.|.|+|.|.|..|....++.|.|.++|.
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 211 1122222 224567899999999999999999999999887654
No 209
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.75 E-value=6.1e-18 Score=176.41 Aligned_cols=176 Identities=20% Similarity=0.319 Sum_probs=130.2
Q ss_pred eCCCcEEEecCCeEEEEEEeeccCC-CeEEEEECCEeec----------C---CCCeE----------EEeeceEEEEcc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHPL-PQMTWFHDGNSLD----------S---DDHVT----------YEHDGFVLVLNG 105 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P~-p~V~W~kdg~~I~----------~---~~~~~----------~~~~gs~L~I~~ 105 (940)
..|..+.+.+|+.+.|.|.+.+.|. +.|.|+|++.... . ..+.. +..++. |.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-L~i~~ 83 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGR-LVLAE 83 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCC-EEESS
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCce-EEEcc
Confidence 4567888999999999999999885 8999998654311 0 11111 233344 79999
Q ss_pred cccCCCeEEEEEEEeCC-CceEEEEEEEEecccC-CeeEecCCceeecCCCcE-EEEEEe-CCCCCCeEEEeeCCeeccc
Q psy11143 106 VRESDAGVYNCVAQNSE-GSAESVAMIRINGHRA-PRLVVKPFDMRAPAGSSV-EIPCKP-DGEPLPRISWSKDEAEFVE 181 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~-g~~~~~~~L~V~~~~~-P~~~~~p~~~~v~~Ge~v-tL~C~v-~g~P~p~ItW~k~g~~i~~ 181 (940)
++.+|+|.|+|.+.+.. +.....+.|.|...+. |.+...+....+.+|+.+ .|.|.+ .+.|.+.++|++++..+..
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~ 163 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEV 163 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCC
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcc
Confidence 99999999999999987 6666678888876543 566666677778899998 999999 8899999999999988865
Q ss_pred cC----ceEEee------------eceEEEeecccCCCceEEEEEEcC-----Ccc-eeeeeeeeec
Q psy11143 182 DR----NHKIHR------------TGSLRLYNIGPQDSGLYRCTASNL-----LGE-DVAEGYLTVT 226 (940)
Q Consensus 182 ~~----~~~~~~------------~~sL~I~~v~~~DsG~YtC~a~N~-----~g~-~s~s~~L~V~ 226 (940)
.. +..+.. .+.|.|.....+|.|.|+|.|.|. .+. .+..+.|.|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V~ 230 (231)
T 2pet_A 164 PVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTLH 230 (231)
T ss_dssp CSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCCC
T ss_pred ccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEEe
Confidence 54 333322 145888766666699999999994 444 4445555543
No 210
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.75 E-value=1.8e-17 Score=170.48 Aligned_cols=166 Identities=17% Similarity=0.231 Sum_probs=120.5
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCe-EEE--eeceEEEEcccccCCCeEEEEEE
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV-TYE--HDGFVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~-~~~--~~gs~L~I~~v~~~DsG~YtC~a 118 (940)
+..+|.+...|. ..+.+|++|+|.|.+.+ +.+.|.|+|+|..+...... ... ..+..|.|.+++.+|+|.|+|.+
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a 82 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYG 82 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeE
Confidence 345778877776 67899999999999974 77899999999765321100 111 23456899999999999999999
Q ss_pred EeCCC-----ceEEEEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEe----
Q psy11143 119 QNSEG-----SAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH---- 188 (940)
Q Consensus 119 ~n~~g-----~~~~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~---- 188 (940)
.+... .....+.|.|.+. +.|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+.........
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~ 160 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGT 160 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTE
T ss_pred ecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCc
Confidence 87531 1223566777654 3466666664 57899999999999986 56789999998876543211111
Q ss_pred eeceEEEeecccCCCceEEEEEEcC
Q psy11143 189 RTGSLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 189 ~~~sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
..+.|.|.+++ |+|.|+|.|.+.
T Consensus 161 ~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 161 FQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EEEEEEEEECC--SCEEEEEEEEET
T ss_pred eEEEEEeCCcC--CCeeEEEEEEcC
Confidence 25679999998 999999999865
No 211
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.75 E-value=4.1e-18 Score=173.45 Aligned_cols=147 Identities=18% Similarity=0.291 Sum_probs=113.1
Q ss_pred EEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcc-cccCCCeEEEEEEEeCCCceEEEEEEEE
Q psy11143 55 TTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNG-VRESDAGVYNCVAQNSEGSAESVAMIRI 133 (940)
Q Consensus 55 ~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~-v~~~DsG~YtC~a~n~~g~~~~~~~L~V 133 (940)
..+.+|++++|.|.+.+ |. .|+|+|+|..+... .+..|.|.+ ++.+|+|.|+|.|.|..|.......+.|
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 44578999999999987 44 49999999998753 233579999 9999999999999999888655555555
Q ss_pred ecccCCeeEe----------------c--C--Cc---eeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeee
Q psy11143 134 NGHRAPRLVV----------------K--P--FD---MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRT 190 (940)
Q Consensus 134 ~~~~~P~~~~----------------~--p--~~---~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~ 190 (940)
.....+.... . + .. ..+.+|+++.|.|.+ |.|.|+|+|+|..+..... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~----~~ 152 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA----TK 152 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC----CS
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC----Cc
Confidence 4433221100 0 0 01 234499999999998 7889999999998864332 45
Q ss_pred ceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 191 GSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 191 ~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 153 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 153 NTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 689999999999999999999988765
No 212
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.74 E-value=5.2e-18 Score=176.24 Aligned_cols=175 Identities=17% Similarity=0.331 Sum_probs=123.7
Q ss_pred eeEEecCCeEEEEEEEeeeCC-----CeEEEEECCeec-------------CCCCceEEee-----cCeEEEEeeeccCC
Q psy11143 238 STTYSTGSTSRITCLVEGHPL-----PQMTWFHDGNSL-------------DSDDHVTYEH-----DGFVLVLNGVRESD 294 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~P~-----p~ItW~k~g~~l-------------~~~~~~~~~~-----~g~sL~I~~v~~~D 294 (940)
...+.+|++++|.|.+.+.|. +.+.|++++... ....+..+.. ...+|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 356778999999999988764 689999987443 1123333322 13459999999999
Q ss_pred CeEEEEEEEeCCCCceeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeC-CeeeccCCcEEE
Q psy11143 295 AGVYNCVAQNSEGSAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKD-EAEFVEDRNHKI 371 (940)
Q Consensus 295 sG~YtC~A~N~~Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~-g~~i~~~~~~~i 371 (940)
+|.|+|.+.|. +..+..+.|.|.... +|.+...+ ...+.+|++++|.|.+ .+.|.|.+.|+++ +..+........
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 99999999986 344455556665432 35555444 4467889999999999 8999999999994 444433222222
Q ss_pred ee--ec---eEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 372 HR--TG---SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 372 ~~--~~---sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
.. .+ .|.|.++..+|.|.|+|.|.|..|....++.|.|.++|.
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 11 22 378999999999999999999999999999999988764
No 213
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=2e-17 Score=176.28 Aligned_cols=180 Identities=17% Similarity=0.181 Sum_probs=131.1
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC-CeEEEeeceEEEEcccccCCCeEEEEEEEeC
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD-HVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~-~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
..+|.+...|.. .|.+|++|+|.|.+.+ +.+.+.|+|+|..+.... ..........|.|.+++.+|+|.|+|.+.+.
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 457888888877 8999999999999875 456899999998764210 0001123456799999999999999999886
Q ss_pred CCce--EEEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeec
Q psy11143 122 EGSA--ESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNI 198 (940)
Q Consensus 122 ~g~~--~~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v 198 (940)
.+.. ...+.|.|.+.. .|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+... .........|.|.++
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~-~~~~~~~~~l~I~~v 159 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ-RGYGKVQAEFPLGPV 159 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE-EEECSSEEEEEEEEC
T ss_pred CccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc-ccCCCceEEEEeCCC
Confidence 4432 235667776533 46666555 4568899999999998865 4599999998766531 111223467999999
Q ss_pred ccCCCceEEEEEEcCC---cceeeeeeeeecC
Q psy11143 199 GPQDSGLYRCTASNLL---GEDVAEGYLTVTG 227 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~---g~~s~s~~L~V~~ 227 (940)
+.+|+|.|+|.+.|.. ...+..+.|.|..
T Consensus 160 ~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 160 TTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp CGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred ccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 9999999999999864 2345566777775
No 214
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.74 E-value=2.2e-17 Score=170.45 Aligned_cols=166 Identities=18% Similarity=0.321 Sum_probs=124.1
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--E---eec---------CCCCeEEEe--eceEEEEcccccC
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--N---SLD---------SDDHVTYEH--DGFVLVLNGVRES 109 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~---~I~---------~~~~~~~~~--~gs~L~I~~v~~~ 109 (940)
|.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++ . .+. ...++.+.. ....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 45566678899999999999999999999999999842 1 110 023444332 2246899999999
Q ss_pred CCeEEEEEEEeCCCc---eEEEEEEEEec-ccCCeeEecCCceeecCCCcEEEEEEeCC-CCCCeEEEeeCCeeccccC-
Q psy11143 110 DAGVYNCVAQNSEGS---AESVAMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFVEDR- 183 (940)
Q Consensus 110 DsG~YtC~a~n~~g~---~~~~~~L~V~~-~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p~ItW~k~g~~i~~~~- 183 (940)
|+|.|+|.|.|..+. ....+.+.|.. ...|.+...+....+.+|+.++|.|.+.+ .|.+.++|++++..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~ 161 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIE 161 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCee
Confidence 999999999998763 22244566644 33466666666666778999999999998 8999999999998875321
Q ss_pred ---------ceEEeeeceEEEeecccCCCceEEEEEE
Q psy11143 184 ---------NHKIHRTGSLRLYNIGPQDSGLYRCTAS 211 (940)
Q Consensus 184 ---------~~~~~~~~sL~I~~v~~~DsG~YtC~a~ 211 (940)
...+...+.|.|.++..+|+|.|+|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 162 NSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 1222334679999999999999999998
No 215
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.73 E-value=3.5e-17 Score=168.87 Aligned_cols=166 Identities=17% Similarity=0.310 Sum_probs=121.4
Q ss_pred CCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Eee------------cCCCCeEEEee--ceEEEEcccccCCCeEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL------------DSDDHVTYEHD--GFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~I------------~~~~~~~~~~~--gs~L~I~~v~~~DsG~Yt 115 (940)
|..+.+.+|+.++|.|.+.+.|.+.|.|+|++ ..+ ....++.+... ...|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 78889999999999999999888899999842 221 11234443322 246899999999999999
Q ss_pred EEEEeCCCceEE-EEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeecccc-C-------
Q psy11143 116 CVAQNSEGSAES-VAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVED-R------- 183 (940)
Q Consensus 116 C~a~n~~g~~~~-~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i~~~-~------- 183 (940)
|.+.|..+.... ...|.|.... +|.+...+....+.+|+.++|.|.+.| .|.+ .|+|+++|..+... .
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 999988765433 3456665432 466666555444568999999999987 4554 89999999887544 1
Q ss_pred --ceEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 184 --NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 184 --~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
.......+.|.|.++..+|+|.|+|.|.|.....
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 1111223479999999999999999999976543
No 216
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.73 E-value=2.3e-17 Score=170.30 Aligned_cols=165 Identities=18% Similarity=0.339 Sum_probs=123.8
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec------------CCCCceEEeecC--eEEEEeeeccCC
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL------------DSDDHVTYEHDG--FVLVLNGVRESD 294 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l------------~~~~~~~~~~~g--~sL~I~~v~~~D 294 (940)
.+...|....+.+|++++|.|.+.+.|.+.+.|+|+. ..+ ....++.+...+ .+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECAD 82 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHH
Confidence 3455577788999999999999999999999999852 211 012344444322 359999999999
Q ss_pred CeEEEEEEEeCCCC---ceeEEEEEEee-ccCCeEEEcCCceeecCCCeEEEEEeecC-cCCCeEEEEeCCeeeccCC--
Q psy11143 295 AGVYNCVAQNSEGS---AESVAMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFVEDR-- 367 (940)
Q Consensus 295 sG~YtC~A~N~~Gs---~~~s~~l~V~~-~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p~i~W~k~g~~i~~~~-- 367 (940)
+|.|+|.|.|..+. ......+.|.. ..+|.+...+....+.+|+.++|.|.+.| .|.|.|.|+|+|..+..+.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~ 162 (213)
T 3nl4_L 83 AATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIEN 162 (213)
T ss_dssp CEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEE
T ss_pred CEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeec
Confidence 99999999998763 22334555543 45677776565556778999999999998 8999999999998875321
Q ss_pred --------cEEEeeeceEEEecCCCCCCeEEEEEEE
Q psy11143 368 --------NHKIHRTGSLRLYNIGPQDSGLYRCTAS 395 (940)
Q Consensus 368 --------~~~i~~~~sL~I~~v~~~D~G~YtC~A~ 395 (940)
.......++|.|..+..+|.|.|+|.|.
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 163 SKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 1112234679999999999999999999
No 217
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.73 E-value=5.3e-17 Score=166.93 Aligned_cols=166 Identities=16% Similarity=0.211 Sum_probs=120.5
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCce---EEeecCeEEEEeeeccCCCeEEEEEEEe
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHV---TYEHDGFVLVLNGVRESDAGVYNCVAQN 304 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~---~~~~~g~sL~I~~v~~~DsG~YtC~A~N 304 (940)
.+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+...... .....+..|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4555655554 67889999999999974 77899999998766422111 1112234599999999999999999987
Q ss_pred CCC-----CceeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEe----ee
Q psy11143 305 SEG-----SAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH----RT 374 (940)
Q Consensus 305 ~~G-----s~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~----~~ 374 (940)
... ..+..+.|.|... .+|.+...|. ..+.+|++++|.|.+.+ |.+.|.|+|+|..+......... ..
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~ 162 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQ 162 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEE
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceE
Confidence 532 2234556777643 4577777665 47899999999999986 56899999999866433211111 25
Q ss_pred ceEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 375 GSLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 375 ~sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
++|.|.+++ |+|.|+|.|.+...
T Consensus 163 ~~L~i~~v~--d~G~Y~C~a~~~~~ 185 (201)
T 1nkr_A 163 ADFPLGPAT--HGGTYRCFGSFHDS 185 (201)
T ss_dssp EEEEEEECC--SCEEEEEEEEETTE
T ss_pred EEEEeCCcC--CCeeEEEEEEcCCC
Confidence 689999998 99999999998643
No 218
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.73 E-value=6.6e-18 Score=184.54 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=109.2
Q ss_pred EecCCceeecCCCcEEEEEEeCCCCCC-eEEEee--CCeec-cccCceEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 142 VVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSK--DEAEF-VEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 142 ~~~p~~~~v~~Ge~vtL~C~v~g~P~p-~ItW~k--~g~~i-~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
.+.|....|.+|+++.|.|.+.. +.+ .+.|.- .+..+ ..... ...+.+.+++. .|.|+|.+.......
T Consensus 3 ~v~P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~~-----~~~~~l~~v~~--~~~y~C~~~~~~~~~ 74 (291)
T 1mq8_A 3 SVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNN-----RKVYELSNVQE--DSQPMCYSNCPDGQS 74 (291)
T ss_dssp EEECSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCSS-----EEEEEEESCCS--CCCCEEEEECSSCEE
T ss_pred EEeCCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCCCc-----eEEEEEEeccc--CCeEEEEEEcCCccE
Confidence 34566788999999999999974 444 488864 22222 11111 12477888874 357999997654456
Q ss_pred eeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeee-CCC--eEEEEECCeecCCCCceEEeecCeEEEEeeeccCC
Q psy11143 218 VAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP--QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESD 294 (940)
Q Consensus 218 s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p--~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~D 294 (940)
+..+.|.|...|..+.+.+....+.+|+.++|.|.+.|. |.. +|+|+|++..+....... .....+|.+.....++
T Consensus 75 ~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~-~~~~~~l~~~~~~~D~ 153 (291)
T 1mq8_A 75 TAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG-EPAEVTTTVLVRRDHH 153 (291)
T ss_dssp EEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCB-TTEEEEEECCCSSSCS
T ss_pred EEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCC-CCceEEEEeeeeeccC
Confidence 677788888666555555555568899999999999885 444 599999998775322110 0011236666666677
Q ss_pred CeEEEEEEEeCCCC--------ceeEEEEEEeeccCCeE--E-EcCCceeecCCCeEEEEEeecCcCCC---eEEEEeCC
Q psy11143 295 AGVYNCVAQNSEGS--------AESVAMIRINGHRAPRL--V-VKPFDMRAPAGSSVEIPCKPDGEPLP---RISWSKDE 360 (940)
Q Consensus 295 sG~YtC~A~N~~Gs--------~~~s~~l~V~~~~~P~i--~-~~p~~~~v~~G~~vtL~C~v~g~P~p---~i~W~k~g 360 (940)
.+.|+|+|.|..+. .+....+.|. ++|.. . ..| ..+.+|+.++|.|.+.|.|++ .++|+++|
T Consensus 154 g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~--~~P~~~~~~~~p--~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g 229 (291)
T 1mq8_A 154 GANFSCRTELDLRPQGLELFENTSAPYQLQTF--VLPATPPQLVSP--RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGD 229 (291)
T ss_dssp SCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------------
T ss_pred CceEEEEEEecCCccCCccccccccceEEEEE--ecCCCCceecCC--cCccCCCeEEEEEEcCCCCCCcccEEEEEECC
Confidence 77999999998653 1233344443 44321 1 112 257899999999999998664 69999999
Q ss_pred eeeccCCcEEEeeeceEEEecC---CCCC--CeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 361 AEFVEDRNHKIHRTGSLRLYNI---GPQD--SGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 361 ~~i~~~~~~~i~~~~sL~I~~v---~~~D--~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
..+.... . .....+++... .+++ .+.|+|.|.|.....+....|+|...
T Consensus 230 ~~l~~~~--~-~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~ 283 (291)
T 1mq8_A 230 QRLNPTV--T-YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSF 283 (291)
T ss_dssp ---------------------------------------------------------
T ss_pred EecCcee--e-ecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcC
Confidence 8875421 1 11223333333 3434 56678998885555666777887764
No 219
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.73 E-value=3.5e-17 Score=171.09 Aligned_cols=171 Identities=20% Similarity=0.237 Sum_probs=117.8
Q ss_pred CceeecCCCcEEEEEEeCCCCCC---eEEEeeCCeecc-----------c------cCceEEe------eeceEEEeecc
Q psy11143 146 FDMRAPAGSSVEIPCKPDGEPLP---RISWSKDEAEFV-----------E------DRNHKIH------RTGSLRLYNIG 199 (940)
Q Consensus 146 ~~~~v~~Ge~vtL~C~v~g~P~p---~ItW~k~g~~i~-----------~------~~~~~~~------~~~sL~I~~v~ 199 (940)
.++.+.+|++++|.|.+.+.+.+ .|.|+|++.... . ..+.... .+.+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 45678899999999999876544 699998654211 0 0111111 13479999999
Q ss_pred cCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEee-eCCCeEEEEECCeec-CCCCce-
Q psy11143 200 PQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSL-DSDDHV- 276 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G-~P~p~ItW~k~g~~l-~~~~~~- 276 (940)
.+|+|.|+|.|.|..+.....+.+.+.. .....+....+.+|+.+.|.|.+.| .|.|.|+|++++..+ ......
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~---~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAA---LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEB---CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecc---ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE
Confidence 9999999999999888776665555442 2223344567788999999999998 599999999975444 332222
Q ss_pred EEeecCe--EEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 277 TYEHDGF--VLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 277 ~~~~~g~--sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
....++. .+.+..++.+|+|.|+|.|.|..|..++++.|.|..
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred EECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 2222332 244557888999999999999999998888877743
No 220
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.72 E-value=6.3e-17 Score=166.97 Aligned_cols=167 Identities=19% Similarity=0.269 Sum_probs=120.5
Q ss_pred CCceeecCCCcEEEEEEeCCCCCCeEEEeeC--Ceec------------cccCceEEeee---ceEEEeecccCCCceEE
Q psy11143 145 PFDMRAPAGSSVEIPCKPDGEPLPRISWSKD--EAEF------------VEDRNHKIHRT---GSLRLYNIGPQDSGLYR 207 (940)
Q Consensus 145 p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~--g~~i------------~~~~~~~~~~~---~sL~I~~v~~~DsG~Yt 207 (940)
|....+.+|++++|.|.+.+.|.+.|.|+++ +..+ ....++..... .+|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 7788899999999999999998889999984 2221 01234443322 37999999999999999
Q ss_pred EEEEcCCccee-eeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEeee-CCC-eEEEEECCeecCCC-Cc---eEE
Q psy11143 208 CTASNLLGEDV-AEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP-QMTWFHDGNSLDSD-DH---VTY 278 (940)
Q Consensus 208 C~a~N~~g~~s-~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p-~ItW~k~g~~l~~~-~~---~~~ 278 (940)
|.+.|..+... ....|.|.. .+|.+...+....+..|+.++|.|.+.|. |.+ .|+|+|+|..+... .. ...
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 99998776432 233566653 24555554443344589999999999984 554 89999999988655 11 111
Q ss_pred eecC-----eEEEEeeeccCCCeEEEEEEEeCCCCcee
Q psy11143 279 EHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 279 ~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~ 311 (940)
..++ ..|.|..+..+|+|.|+|.|.|.......
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPV 204 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCE
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCee
Confidence 1122 25999999999999999999998765543
No 221
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.72 E-value=5.4e-17 Score=168.00 Aligned_cols=173 Identities=14% Similarity=0.282 Sum_probs=122.5
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeee-CCCeEEEEECC--eec--------------C--CCCceEEee--cCeEEEEeee
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDG--NSL--------------D--SDDHVTYEH--DGFVLVLNGV 290 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~-P~p~ItW~k~g--~~l--------------~--~~~~~~~~~--~g~sL~I~~v 290 (940)
+...+ ...+.+|++++|.|.+.+. |.+.+.|+|.. ... . ...++.+.. ...+|.|.++
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNI 82 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccC
Confidence 34445 7789999999999999998 89999999832 110 0 112444322 2245999999
Q ss_pred ccCCCeEEEEEEEeCCC-----CceeEEEEEEeec--cCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCe
Q psy11143 291 RESDAGVYNCVAQNSEG-----SAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEA 361 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~G-----s~~~s~~l~V~~~--~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~ 361 (940)
+.+|+|.|+|.|.|..| .......|.|... .+|.+...+.......|+.++|.|.+.| .|.| .|.|+|+|.
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~ 162 (218)
T 3s96_B 83 QPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGT 162 (218)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCE
Confidence 99999999999999887 2233445666532 5677776555555566799999999998 5777 999999999
Q ss_pred eeccCCcE--------EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 362 EFVEDRNH--------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 362 ~i~~~~~~--------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
.+..+... .....+.|.|.....+|.|.|+|.|.|..|....++
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 163 PITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred ECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 87642110 011124588888888899999999999998766543
No 222
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=4.1e-17 Score=174.58 Aligned_cols=177 Identities=18% Similarity=0.262 Sum_probs=125.3
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEEC--CeecC----------------CCCceEEeec----CeEEEEeeec
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD----------------SDDHVTYEHD----GFVLVLNGVR 291 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~--g~~l~----------------~~~~~~~~~~----g~sL~I~~v~ 291 (940)
+....+.+|++++|.|.+.|.| .+.|.|+|+ +..+. ...++.+..+ ..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3445788999999999999985 689999986 22110 1245555432 2369999999
Q ss_pred cCCCeEEEEEEEeCCCC------c---eeEEEEEEeecc-------------CCeEEEcCCceeecCCCeEEEEEeecCc
Q psy11143 292 ESDAGVYNCVAQNSEGS------A---ESVAMIRINGHR-------------APRLVVKPFDMRAPAGSSVEIPCKPDGE 349 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs------~---~~s~~l~V~~~~-------------~P~i~~~p~~~~v~~G~~vtL~C~v~g~ 349 (940)
.+|+|.|+|.|.|..|. . .....|.|.... ++.+...|..+.+.+|++++|.|.+.+.
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 166 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQN 166 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSC
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCc
Confidence 99999999999998641 1 123456665421 2334455666788999999999999999
Q ss_pred CCCeEEEEe--CCeeec------------cCCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 350 PLPRISWSK--DEAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 350 P~p~i~W~k--~g~~i~------------~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
|.+.+.|+| ++..+. ...++.+.. ..+|.|.++..+|+|.|+|.|.|....-...+.|.|++.
T Consensus 167 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp CBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSS
T ss_pred CCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCC
Confidence 999999999 554321 124555432 337999999999999999999997522222446666554
No 223
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.72 E-value=1.7e-16 Score=162.54 Aligned_cols=160 Identities=13% Similarity=0.206 Sum_probs=116.0
Q ss_pred CCCeeEEecCCeEEEEEEEee-eCCCeEEEEECCeecC---CC---------------CceEEeecCeEEEEeeeccCCC
Q psy11143 235 RPVSTTYSTGSTSRITCLVEG-HPLPQMTWFHDGNSLD---SD---------------DHVTYEHDGFVLVLNGVRESDA 295 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G-~P~p~ItW~k~g~~l~---~~---------------~~~~~~~~g~sL~I~~v~~~Ds 295 (940)
.|....+.+|++++|.|.+.+ .+.+.|.|++++..+. .. .+..+..+ .+|+|.+++.+|+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~sL~I~~v~~~D~ 82 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQS-YSLQLSNLKMEDT 82 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTT-CCEEECSCCGGGC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCC-eEEEECCCCcccC
Confidence 456678889999999999875 4557999999976542 10 13344433 4499999999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEEeecc-CCeEEEcCCceeecCCC-eEEEEEeecCc-CCCeEEEEeCCeeeccCCcEEEe
Q psy11143 296 GVYNCVAQNSEGSAESVAMIRINGHR-APRLVVKPFDMRAPAGS-SVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHKIH 372 (940)
Q Consensus 296 G~YtC~A~N~~Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~-~vtL~C~v~g~-P~p~i~W~k~g~~i~~~~~~~i~ 372 (940)
|.|+|.+.|..+.....+.|.|.... .|.+...+ .....|. +++|.|.+.|. |.|.|+|+++|..+..
T Consensus 83 G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~------- 153 (193)
T 2if7_A 83 GSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS------- 153 (193)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------
T ss_pred ceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------
Confidence 99999999998877666677775422 24444433 1234465 89999999985 5789999999976543
Q ss_pred eeceEEEecCCCC-CCeEEEEEEEeCCeeEEEEE
Q psy11143 373 RTGSLRLYNIGPQ-DSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 373 ~~~sL~I~~v~~~-D~G~YtC~A~N~~G~~~~s~ 405 (940)
.+.|.|.....+ |.|.|+|.|.|..|..+..+
T Consensus 154 -~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 154 -QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp -SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred -CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 235666544454 89999999999999886543
No 224
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.71 E-value=2.3e-16 Score=163.60 Aligned_cols=173 Identities=19% Similarity=0.331 Sum_probs=121.5
Q ss_pred cCCceeecCCCcEEEEEEeCCCCC-----CeEEEeeCCeeccc---------------cCceEEee------eceEEEee
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGEPL-----PRISWSKDEAEFVE---------------DRNHKIHR------TGSLRLYN 197 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~P~-----p~ItW~k~g~~i~~---------------~~~~~~~~------~~sL~I~~ 197 (940)
.+..+.+.+|+++.|.|.+.+.|. +.+.|++++..+.. ..+..+.. +.+|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 345567889999999999987663 48999997532210 12333322 24799999
Q ss_pred cccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC-CeecCCCCce
Q psy11143 198 IGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD-GNSLDSDDHV 276 (940)
Q Consensus 198 v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~-g~~l~~~~~~ 276 (940)
++.+|+|.|+|.+.| .+.....+.|.|.. ++..........+..|+.++|.|.+.|+|.|.|+|+++ +..+......
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~-~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNA-PYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEB-CCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEE
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEEC-CCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccce
Confidence 999999999999999 56666677788873 32221111123567899999999999999999999998 6655543322
Q ss_pred EEe--ecCe--EEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 277 TYE--HDGF--VLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 277 ~~~--~~g~--sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
... .++. ...+..+...|.|.|+|.|.|..|....++.|.|.
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 221 1221 12233556789999999999999999888888775
No 225
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.71 E-value=1.2e-17 Score=172.84 Aligned_cols=156 Identities=20% Similarity=0.341 Sum_probs=110.5
Q ss_pred EecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEee-
Q psy11143 241 YSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRING- 319 (940)
Q Consensus 241 v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~- 319 (940)
+.+|++++|.|.+ |.+.|+|+|+|..+... ...+.+|.|.++..+|+|.|+|.+.+... . ...|.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s-~--~~~v~v~~~ 83 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNKS-K--PLQVYYRMG 83 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSCC-C--CEEEEEEC-
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCCC-e--eEEEEEEEe
Confidence 3579999999998 78899999999887532 11233599999999999999999755322 2 23333330
Q ss_pred ---------------------------c-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccC--CcE
Q psy11143 320 ---------------------------H-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVED--RNH 369 (940)
Q Consensus 320 ---------------------------~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~--~~~ 369 (940)
. .+|.+...|. ....+|++++|.|. |.|.|.|.|+|++..+... .+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~ 160 (204)
T 1sy6_A 84 SADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKN 160 (204)
T ss_dssp -----------------------------------CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTT
T ss_pred ccccccccccccccccccccccccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCce
Confidence 0 0222222222 22238999999999 7899999999999987643 223
Q ss_pred EEeeeceEEEecC-CCCCCeEEEEEEEeCCeeE-EEEEEEEEe
Q psy11143 370 KIHRTGSLRLYNI-GPQDSGLYRCTASNLLGED-VAEGYLTVT 410 (940)
Q Consensus 370 ~i~~~~sL~I~~v-~~~D~G~YtC~A~N~~G~~-~~s~~L~V~ 410 (940)
....+++|.|.++ +.+|+|.|+|.|.|..|.. +...+|.|+
T Consensus 161 ~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 161 IGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp EEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred EecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 3335789999999 9999999999999999963 445555543
No 226
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=1.6e-16 Score=168.27 Aligned_cols=174 Identities=16% Similarity=0.308 Sum_probs=126.2
Q ss_pred CeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eec-----------------CCCCceEEeec----CeEEEEeeec
Q psy11143 237 VSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL-----------------DSDDHVTYEHD----GFVLVLNGVR 291 (940)
Q Consensus 237 ~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l-----------------~~~~~~~~~~~----g~sL~I~~v~ 291 (940)
....+.+|++++|.|.+.+.| .+.|.|+|+. ..+ ....++.+..+ ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 457888999999999999987 6789999842 111 12245555432 2359999999
Q ss_pred cCCCeEEEEEEEeCCCCc--eeEEEEEEeec-------------cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEE
Q psy11143 292 ESDAGVYNCVAQNSEGSA--ESVAMIRINGH-------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISW 356 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~--~~s~~l~V~~~-------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W 356 (940)
.+|+|.|+|.|.|..+.. .....|.|... .+|.+...+..+.+.+|++++|.|.+.+.|.|.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 999999999999983221 22345666542 245566667778899999999999999999999999
Q ss_pred Ee--CCeeec------------cCCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeEE-EEEEEEEe
Q psy11143 357 SK--DEAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDV-AEGYLTVT 410 (940)
Q Consensus 357 ~k--~g~~i~------------~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~~-~s~~L~V~ 410 (940)
+| ++..+. ...++.+.. ..+|.|.+++.+|+|.|+|.|.|..+... ..+.|.|.
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99 554321 124554432 34699999999999999999999654332 24467776
No 227
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.71 E-value=1.7e-17 Score=172.40 Aligned_cols=175 Identities=18% Similarity=0.348 Sum_probs=121.8
Q ss_pred CcEEEecCCeEEEEEEeeccCC-----CeEEEEECCEee-------------cCCCCeEEEe-----eceEEEEcccccC
Q psy11143 53 VSTTYSTGSTSRITCLVEGHPL-----PQMTWFHDGNSL-------------DSDDHVTYEH-----DGFVLVLNGVRES 109 (940)
Q Consensus 53 ~~~~V~eGesv~L~C~v~g~P~-----p~V~W~kdg~~I-------------~~~~~~~~~~-----~gs~L~I~~v~~~ 109 (940)
+.+.+.+|+.++|.|.+.+.|. +.|.|++++... ....+..+.. ....|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 4566889999999999988754 689999987432 1122222221 1345799999999
Q ss_pred CCeEEEEEEEeCCCceEEEEEEEEecccC-CeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEee-CCeeccccCceE
Q psy11143 110 DAGVYNCVAQNSEGSAESVAMIRINGHRA-PRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSK-DEAEFVEDRNHK 186 (940)
Q Consensus 110 DsG~YtC~a~n~~g~~~~~~~L~V~~~~~-P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k-~g~~i~~~~~~~ 186 (940)
|+|.|+|.+.+. +.....+.|.|...+. |.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|++ ++..+.......
T Consensus 83 D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~ 160 (222)
T 4i0k_A 83 DEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS 160 (222)
T ss_dssp GCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEE
T ss_pred cCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCccee
Confidence 999999999986 3334455566655433 4444433 4567899999999999 789999999999 454443322222
Q ss_pred Ee--eec---eEEEeecccCCCceEEEEEEcCCcceeeeeeeeecCCC
Q psy11143 187 IH--RTG---SLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGAP 229 (940)
Q Consensus 187 ~~--~~~---sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~ 229 (940)
.. ..+ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|...|
T Consensus 161 ~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 161 QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred EEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 21 112 37899999999999999999999999999999988433
No 228
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.71 E-value=1.3e-16 Score=164.77 Aligned_cols=169 Identities=14% Similarity=0.206 Sum_probs=122.9
Q ss_pred CCeeEEecCCeEEEEEEEeeeC---CCeEEEEECC--eec------------CCCCceEEeecC--eEEEEeeeccCCCe
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP---LPQMTWFHDG--NSL------------DSDDHVTYEHDG--FVLVLNGVRESDAG 296 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P---~p~ItW~k~g--~~l------------~~~~~~~~~~~g--~sL~I~~v~~~DsG 296 (940)
|....+.+|++++|.|.+.+.| .+.|.|+|++ ..+ ....++.....+ .+|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6778899999999999999887 4789999863 222 112344443322 36999999999999
Q ss_pred EEEEEEEeCCCCce-eEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCcCC-C-eEEEEeCCeeeccCCcE--
Q psy11143 297 VYNCVAQNSEGSAE-SVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL-P-RISWSKDEAEFVEDRNH-- 369 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~-~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~-p-~i~W~k~g~~i~~~~~~-- 369 (940)
.|+|.|.|..+... ....+.|.. ..+|.+...+....+..|+.++|.|.+.|.++ + .|.|+|+|..+..+...
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 166 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ 166 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC
Confidence 99999999876422 234555632 25777776555444567999999999998644 3 89999999887644211
Q ss_pred -E------EeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEE
Q psy11143 370 -K------IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 404 (940)
Q Consensus 370 -~------i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s 404 (940)
. ....+.|.|..+..+|.|.|+|.|.|.......+
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 167 PSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred ceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 1 1123468999999999999999999988765443
No 229
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.71 E-value=8.5e-17 Score=166.51 Aligned_cols=174 Identities=14% Similarity=0.290 Sum_probs=122.5
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeecc-CCCeEEEEECC---Ee------------e-c--CCCCeEEE--eeceEEEEc
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDG---NS------------L-D--SDDHVTYE--HDGFVLVLN 104 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~-P~p~V~W~kdg---~~------------I-~--~~~~~~~~--~~gs~L~I~ 104 (940)
+.+...| .+.+.+|++++|.|.+.+. |.+.|.|+|.. .. . . ...++.+. .....|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 3455555 8889999999999999998 88999999832 10 0 0 01233332 123458999
Q ss_pred ccccCCCeEEEEEEEeCCCc-----eEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeC
Q psy11143 105 GVRESDAGVYNCVAQNSEGS-----AESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKD 175 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g~-----~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~ 175 (940)
+++.+|+|.|+|.+.+..|. ....+.|.|... .+|.+...+....+..|+.++|.|.+.+ .|.+ .|+|+++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 99999999999999998762 122456676643 3466666555556667899999999998 5766 8999999
Q ss_pred CeeccccCc--------eEEeeeceEEEeecccCCCceEEEEEEcCCcceeee
Q psy11143 176 EAEFVEDRN--------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 220 (940)
Q Consensus 176 g~~i~~~~~--------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s 220 (940)
|..+..... ..+.....|.|.....+|+|.|+|.|.|..+.....
T Consensus 161 g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 161 GTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp TEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred CEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 988864211 111223458888888889999999999988765544
No 230
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.71 E-value=6e-17 Score=167.12 Aligned_cols=166 Identities=16% Similarity=0.236 Sum_probs=123.3
Q ss_pred eeEEecCCeEEEEEEEeeeCCCeEEEEEC--CeecC------------CCCceEEee--cCeEEEEeeeccCCCeEEEEE
Q psy11143 238 STTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD------------SDDHVTYEH--DGFVLVLNGVRESDAGVYNCV 301 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l~------------~~~~~~~~~--~g~sL~I~~v~~~DsG~YtC~ 301 (940)
...+.+|++++|.|.+. |.+.+.|+|+ +..+. ...++.... ...+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 77889999999999998 8889999994 32221 223444332 234599999999999999999
Q ss_pred EEeCCC--CceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCcC--CCeEEEEeCCeeeccCCc-------
Q psy11143 302 AQNSEG--SAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKDEAEFVEDRN------- 368 (940)
Q Consensus 302 A~N~~G--s~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p~i~W~k~g~~i~~~~~------- 368 (940)
|.|..+ .......|.|.. ..+|.+...+....+..|+.++|.|.+.|.+ .+.+.|+|+|..+.....
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 166 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ 166 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceEC
Confidence 999887 334445666652 2578887777655556899999999999863 479999999988754210
Q ss_pred --EEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 369 --HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 369 --~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
......+.|.|..+..+|.|.|+|.|.|..|....++
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 167 SNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp TTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 0111234689999998999999999999998766654
No 231
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.71 E-value=1.8e-16 Score=166.66 Aligned_cols=166 Identities=21% Similarity=0.363 Sum_probs=119.7
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--Ceec---------------CCCCceEEee---cCeEEEEeeec
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSL---------------DSDDHVTYEH---DGFVLVLNGVR 291 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l---------------~~~~~~~~~~---~g~sL~I~~v~ 291 (940)
+...|....+.+|++++|.|. .+.|.+.|.|+|+ +..+ ....++.+.. ...+|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 344567788999999999999 7888999999995 2111 1123454442 23469999999
Q ss_pred cCCCeEEEEEEEeCCCCce-----eEEEEEEeeccC----------CeEEEcCCceeecCCCeEEEEEeecCcCCCeEEE
Q psy11143 292 ESDAGVYNCVAQNSEGSAE-----SVAMIRINGHRA----------PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISW 356 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~~-----~s~~l~V~~~~~----------P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W 356 (940)
.+|+|.|+|.|.|..|... ....+.|....+ +.+...|....+.+|++++|.|.+.+.|.|.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 9999999999999865311 233556643221 1566667778899999999999999999999999
Q ss_pred EeCCe-----ee---------ccCCcEEEee-----eceEEEecCCCCCCeEEEEEEEeCC
Q psy11143 357 SKDEA-----EF---------VEDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNLL 398 (940)
Q Consensus 357 ~k~g~-----~i---------~~~~~~~i~~-----~~sL~I~~v~~~D~G~YtC~A~N~~ 398 (940)
+|++. .+ ....++.+.. ..+|.|.+++.+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99631 11 1234555542 3589999999999999999999983
No 232
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.71 E-value=7.3e-17 Score=165.15 Aligned_cols=166 Identities=14% Similarity=0.248 Sum_probs=117.2
Q ss_pred eeEEecCCeEEEEEEEe----eeCCCeEEEEECCeecCC------------CCceEEe-ecCeEEEEeeeccCCCeEEEE
Q psy11143 238 STTYSTGSTSRITCLVE----GHPLPQMTWFHDGNSLDS------------DDHVTYE-HDGFVLVLNGVRESDAGVYNC 300 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~----G~P~p~ItW~k~g~~l~~------------~~~~~~~-~~g~sL~I~~v~~~DsG~YtC 300 (940)
...+..|+++.|.|.+. +.|.+.+.|++++..+.. ..+..+. ....+|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 46788999999999985 457789999999987620 1122221 223469999999999999999
Q ss_pred EEEeCCCCce-----eEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeec-CcCCCeEEEEeCCeeeccCCcEE-Ee
Q psy11143 301 VAQNSEGSAE-----SVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHK-IH 372 (940)
Q Consensus 301 ~A~N~~Gs~~-----~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~-g~P~p~i~W~k~g~~i~~~~~~~-i~ 372 (940)
.|.|..|... ..+.|.|.... .|.+... ....|+.++|.|.+. |.|.|.|+|+++|..+....... ..
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 9999877653 34455554321 2443332 224588999999995 99999999999998886443222 22
Q ss_pred ee-ceE---EEecCCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy11143 373 RT-GSL---RLYNIGPQDSGLYRCTASNLLGEDVAEGYL 407 (940)
Q Consensus 373 ~~-~sL---~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L 407 (940)
.. +.+ .+..+..+|.|.|+|.|.|..|..++.+.+
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 22 222 234556789999999999999988776544
No 233
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=5.7e-17 Score=174.31 Aligned_cols=217 Identities=13% Similarity=0.144 Sum_probs=124.0
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCc----eEEeeeceEEEeecccCCCceEEEEEEc
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRN----HKIHRTGSLRLYNIGPQDSGLYRCTASN 212 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N 212 (940)
+.|.+...|. ..+.+|++|+|.|.+.+ +.+.+.|+|++..+..... ......+.|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 3466666664 67889999999999975 5678999998875532110 0012356799999999999999999986
Q ss_pred CCc-----ceeeeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEe---ecC
Q psy11143 213 LLG-----EDVAEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE---HDG 282 (940)
Q Consensus 213 ~~g-----~~s~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~---~~g 282 (940)
... ..+..+.|.|.. .+|.+...+. ..+.+|++++|.|.+.+.+ +.+.|+|+|..+......... ..+
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~ 161 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQ 161 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCB
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCcee
Confidence 432 234556677764 3455555444 4688999999999998764 699999999877543221111 123
Q ss_pred eEEEEeeeccCCCeEEEEEEEeCCCC---ceeEEEEEEeeccCCeEEEcC-CceeecCCCeEEEEEeecCcCCCeEEEEe
Q psy11143 283 FVLVLNGVRESDAGVYNCVAQNSEGS---AESVAMIRINGHRAPRLVVKP-FDMRAPAGSSVEIPCKPDGEPLPRISWSK 358 (940)
Q Consensus 283 ~sL~I~~v~~~DsG~YtC~A~N~~Gs---~~~s~~l~V~~~~~P~i~~~p-~~~~v~~G~~vtL~C~v~g~P~p~i~W~k 358 (940)
..|.|.+++ |+|.|+|.|.|.... ...+..+.+.+..+|.+...+ .......|..+.|.|.+ |.+.+.|.|..
T Consensus 162 ~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (257)
T 1b6u_A 162 ADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLN 238 (257)
T ss_dssp EEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC------------------------------------
T ss_pred EEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhh
Confidence 469999998 999999999976431 122223444444566655222 12245678899999876 57888999976
Q ss_pred CC
Q psy11143 359 DE 360 (940)
Q Consensus 359 ~g 360 (940)
.+
T Consensus 239 ~~ 240 (257)
T 1b6u_A 239 LD 240 (257)
T ss_dssp --
T ss_pred hh
Confidence 54
No 234
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.70 E-value=1.2e-16 Score=164.90 Aligned_cols=170 Identities=15% Similarity=0.236 Sum_probs=121.4
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccC---CCeEEEEECC--Eee------------cCCCCeEEEe--eceEEEEccccc
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHP---LPQMTWFHDG--NSL------------DSDDHVTYEH--DGFVLVLNGVRE 108 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P---~p~V~W~kdg--~~I------------~~~~~~~~~~--~gs~L~I~~v~~ 108 (940)
+.. |..+.+.+|+.++|.|.+.+.| .+.|.|+|++ ..+ ....++.... ....|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 344 7888999999999999999877 4789999863 222 1123444332 224689999999
Q ss_pred CCCeEEEEEEEeCCCceEE-EEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCeeccccC
Q psy11143 109 SDAGVYNCVAQNSEGSAES-VAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVEDR 183 (940)
Q Consensus 109 ~DsG~YtC~a~n~~g~~~~-~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~i~~~~ 183 (940)
+|+|.|+|.+.|..+.... ...|.|... .+|.+...+....+..|+.++|.|.+.+. |.+ .|+|+++|..+....
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 162 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGM 162 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCe
Confidence 9999999999997764322 345666432 35666665555556689999999999984 443 899999998875431
Q ss_pred ce---------EEeeeceEEEeecccCCCceEEEEEEcCCccee
Q psy11143 184 NH---------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 184 ~~---------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
.. .......|.|.++..+|+|.|+|.|.|......
T Consensus 163 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 163 ETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp EECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred ecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 10 112234689999999999999999999765533
No 235
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.70 E-value=3e-16 Score=161.87 Aligned_cols=170 Identities=16% Similarity=0.257 Sum_probs=118.1
Q ss_pred EeCCCcEEEecCCeEEEEEEeecc-------CCCeEEEEECCEe------ec-----------CCCCeEEEee----ceE
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGH-------PLPQMTWFHDGNS------LD-----------SDDHVTYEHD----GFV 100 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~-------P~p~V~W~kdg~~------I~-----------~~~~~~~~~~----gs~ 100 (940)
...|..+.+.+|++|+|.|.+.+. +.+.|.|+|++.. +. ...++.+..+ ...
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 345678889999999999999754 5679999998752 10 1123343321 235
Q ss_pred EEEcccccCCCeEEEEEEEeCCCceE----EEEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCC----CCCeEE
Q psy11143 101 LVLNGVRESDAGVYNCVAQNSEGSAE----SVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGE----PLPRIS 171 (940)
Q Consensus 101 L~I~~v~~~DsG~YtC~a~n~~g~~~----~~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~----P~p~It 171 (940)
|.|.+++.+|+|.|+|.+.+..+... ..+.|.|...+ .|.+.. +. .+.+|+.++|.|.+.+. |.|.++
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEE
Confidence 89999999999999999998764322 24667776543 344433 22 36799999999999874 888999
Q ss_pred EeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeee
Q psy11143 172 WSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 224 (940)
Q Consensus 172 W~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~ 224 (940)
|++++....... ....+.|.|..+..+|.|.|+|.|.|..+....+..+.
T Consensus 161 W~~~~~~~~~~~---~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 161 WTGNALSPLDPE---TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp EESSTTSSSCSS---CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred EeCCCCccCCCC---ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 999886543221 13456799999999999999999999765544333333
No 236
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.70 E-value=1.3e-16 Score=164.55 Aligned_cols=172 Identities=15% Similarity=0.234 Sum_probs=124.1
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC---Ee--e---------cCCCCeEEEe--eceEEEEcccccC
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG---NS--L---------DSDDHVTYEH--DGFVLVLNGVRES 109 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg---~~--I---------~~~~~~~~~~--~gs~L~I~~v~~~ 109 (940)
+.+...|..+.+.+|+.++|.|.+.+.|.+.|.|+|.+ .. + ....++.+.. ....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 45566678899999999999999999988999999832 11 0 0122333332 2346899999999
Q ss_pred CCeEEEEEEEeCCCceEE-EEEEEEec-ccCCeeEecCCceeecCCCcEEEEEEeCCCCC--CeEEEeeCCeeccccC--
Q psy11143 110 DAGVYNCVAQNSEGSAES-VAMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL--PRISWSKDEAEFVEDR-- 183 (940)
Q Consensus 110 DsG~YtC~a~n~~g~~~~-~~~L~V~~-~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~--p~ItW~k~g~~i~~~~-- 183 (940)
|+|.|+|.+.+..+.... ...|.|.. ..+|.+...+....+..|+.++|.|.+.+.++ +.++|+++|..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 161 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQ 161 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEe
Confidence 999999999987653332 44566633 34567777676666778999999999998554 3899999998875421
Q ss_pred --------ceEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 184 --------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 184 --------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
...+.....|.|.....+|+|.|+|.|.|.....
T Consensus 162 ~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 162 SVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred ccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 1112223468888888899999999999976443
No 237
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.70 E-value=1.5e-16 Score=166.77 Aligned_cols=176 Identities=16% Similarity=0.283 Sum_probs=126.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Ee---e---------cCCCCeEEEe--eceEEEEccccc
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NS---L---------DSDDHVTYEH--DGFVLVLNGVRE 108 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~---I---------~~~~~~~~~~--~gs~L~I~~v~~ 108 (940)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++ .. + ....++.... ....|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 445666688899999999999999999888899999842 10 0 1123333332 234589999999
Q ss_pred CCCeEEEEEEEeCCCceEE-EEEEEEec-ccCCeeEecCCceeecCCCcEEEEEEeCC-CC-CCeEEEeeCCeeccccC-
Q psy11143 109 SDAGVYNCVAQNSEGSAES-VAMIRING-HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EP-LPRISWSKDEAEFVEDR- 183 (940)
Q Consensus 109 ~DsG~YtC~a~n~~g~~~~-~~~L~V~~-~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P-~p~ItW~k~g~~i~~~~- 183 (940)
+|+|.|+|.+.+..+.... ...+.|.. ...|.+...+....+.+|+.++|.|.+.+ .| .+.++|++++..+....
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ 183 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCcee
Confidence 9999999999887653322 34566654 34566666665555667999999999987 45 58999999998876421
Q ss_pred ---------ceEEeeeceEEEeecccCCCceEEEEEEcCCcceeee
Q psy11143 184 ---------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 220 (940)
Q Consensus 184 ---------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s 220 (940)
...+.....|.|..+..+|+|.|+|.|.|........
T Consensus 184 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 184 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 1122234468899999999999999999987654433
No 238
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.70 E-value=2e-16 Score=163.18 Aligned_cols=170 Identities=16% Similarity=0.253 Sum_probs=119.4
Q ss_pred eCCCeeEEecCCeEEEEEEEeee-------CCCeEEEEECCeec-----------------CCCCceEEeec----CeEE
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGH-------PLPQMTWFHDGNSL-----------------DSDDHVTYEHD----GFVL 285 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~-------P~p~ItW~k~g~~l-----------------~~~~~~~~~~~----g~sL 285 (940)
..|....+.+|++++|.|.+.+. +.+.+.|+|++... ....++.+..+ ..+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 44667889999999999998754 56799999986521 11234444332 2359
Q ss_pred EEeeeccCCCeEEEEEEEeCCCCce----eEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeecCc----CCCeEEE
Q psy11143 286 VLNGVRESDAGVYNCVAQNSEGSAE----SVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGE----PLPRISW 356 (940)
Q Consensus 286 ~I~~v~~~DsG~YtC~A~N~~Gs~~----~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~g~----P~p~i~W 356 (940)
.|.+++.+|+|.|+|.+.+..+... ..+.|.|.... +|.+.. +. .+.+|+.++|.|.+.+. |.|.|+|
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W 161 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSW 161 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEE
Confidence 9999999999999999999863221 34566665432 455543 32 36789999999999874 8899999
Q ss_pred EeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy11143 357 SKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 409 (940)
Q Consensus 357 ~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V 409 (940)
++++....... . ...+.|.|..+..+|.|.|+|.|.|..|....+..+.+
T Consensus 162 ~~~~~~~~~~~-~--~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 162 TGNALSPLDPE-T--TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp ESSTTSSSCSS-C--CCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred eCCCCccCCCC-c--eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 99986543221 1 34668999999999999999999998765444444443
No 239
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=2.1e-16 Score=164.19 Aligned_cols=174 Identities=16% Similarity=0.263 Sum_probs=121.0
Q ss_pred eCCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEeec-----------------CCCCeEEEee----ceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~I~-----------------~~~~~~~~~~----gs~L~I~ 104 (940)
.+|..+.+.+|++++|.|.+.+.| .+.|.|+|+ +..+. ...++.+..+ ...|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 345677899999999999999865 679999997 33221 1234444322 2468999
Q ss_pred ccccCCCeEEEEEEEeCCCce--E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCC
Q psy11143 105 GVRESDAGVYNCVAQNSEGSA--E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDE 176 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g~~--~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g 176 (940)
+++.+|+|.|+|.+.+..+.. . ..+.|.|... ..|.+...+....+.+|+.++|.|.+.| .|.| .|+|++++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 999999999999999986432 1 2456666652 2355655554456779999999999998 8988 99999988
Q ss_pred eecccc--Cc----eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeee
Q psy11143 177 AEFVED--RN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 224 (940)
Q Consensus 177 ~~i~~~--~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~ 224 (940)
..+... .. ......+.|.|... ..|.|.|+|.|.|..+.......+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp BCTTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEECC
T ss_pred cccceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEecC
Confidence 764211 00 11122346888444 4466999999999888765554443
No 240
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=163.21 Aligned_cols=157 Identities=21% Similarity=0.302 Sum_probs=115.5
Q ss_pred cCCceeecCCCcEEEEEEeCC-CCCCeEEEeeCCeecc---c-c--------------CceEEeeeceEEEeecccCCCc
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDG-EPLPRISWSKDEAEFV---E-D--------------RNHKIHRTGSLRLYNIGPQDSG 204 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g-~P~p~ItW~k~g~~i~---~-~--------------~~~~~~~~~sL~I~~v~~~DsG 204 (940)
.|..+.+.+|++++|.|.+.+ .+.+.|.|++++..+. . . .+..+..+++|.|.+++.+|+|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCc
Confidence 345677889999999999875 4557999999876442 0 0 1333444678999999999999
Q ss_pred eEEEEEEcCCcceeeeeeeeecCCC--CeeeeCCCeeEEecCC-eEEEEEEEeee-CCCeEEEEECCeecCCCCceEEee
Q psy11143 205 LYRCTASNLLGEDVAEGYLTVTGAP--PIFIQRPVSTTYSTGS-TSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVTYEH 280 (940)
Q Consensus 205 ~YtC~a~N~~g~~s~s~~L~V~~~~--p~~~~~p~~~~v~~G~-~v~L~C~v~G~-P~p~ItW~k~g~~l~~~~~~~~~~ 280 (940)
.|+|.+.+..+.....+.|.|...+ |.+...+ .....|. .++|.|.+.|. |.|.|+|+++|..+..
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------- 153 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS-------- 153 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES--------
T ss_pred eEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC--------
Confidence 9999999988876677788887443 2222222 2233465 89999999995 5889999999986632
Q ss_pred cCeEEEEeeeccC-CCeEEEEEEEeCCCCcee
Q psy11143 281 DGFVLVLNGVRES-DAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 281 ~g~sL~I~~v~~~-DsG~YtC~A~N~~Gs~~~ 311 (940)
+..|.|.....+ |+|.|+|.|.|..|..+.
T Consensus 154 -~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 154 -QPNLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp -SSEEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred -CCeEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 234777655554 899999999999988744
No 241
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.70 E-value=3e-16 Score=166.43 Aligned_cols=167 Identities=19% Similarity=0.290 Sum_probs=118.5
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCE-----ee---------cCCCCeEEEee--ceEEEEcccccC
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGN-----SL---------DSDDHVTYEHD--GFVLVLNGVRES 109 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~-----~I---------~~~~~~~~~~~--gs~L~I~~v~~~ 109 (940)
..+...|..+.+.+|++|+|.|.+.+.|.+.|.|+|+.. .+ ....++..... ...|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 345566778889999999999999999999999998531 11 11223333322 235899999999
Q ss_pred CCeEEEEEEEeCCCceEE-EEEEEEecc-----------------cCCeeEecCCceeecCCCcEEEEEEeCCCC--CCe
Q psy11143 110 DAGVYNCVAQNSEGSAES-VAMIRINGH-----------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPR 169 (940)
Q Consensus 110 DsG~YtC~a~n~~g~~~~-~~~L~V~~~-----------------~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P--~p~ 169 (940)
|+|.|+|.+.|..+.... ...|.|... ..+.+...+....+.+|++++|.|.+.+.| .+.
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSW 164 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSE
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCE
Confidence 999999999987654332 345666542 123445556677899999999999999876 789
Q ss_pred EEEeeC--Ceeccc-----------------cCceEEeeec-----eEEEeecccCCCceEEEEEEc
Q psy11143 170 ISWSKD--EAEFVE-----------------DRNHKIHRTG-----SLRLYNIGPQDSGLYRCTASN 212 (940)
Q Consensus 170 ItW~k~--g~~i~~-----------------~~~~~~~~~~-----sL~I~~v~~~DsG~YtC~a~N 212 (940)
+.|+++ +..+.. ..++.+..+. +|.|.+++.+|+|.|+|.+.+
T Consensus 165 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 165 MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 999996 433211 1344443332 699999999999999999997
No 242
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.70 E-value=2.9e-16 Score=168.22 Aligned_cols=176 Identities=16% Similarity=0.297 Sum_probs=127.9
Q ss_pred CCCeeEEecCCeEEEEEEEeeeC--CCeEEEEEC--CeecC-----------------CCCceEEeec----CeEEEEee
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLNG 289 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~--g~~l~-----------------~~~~~~~~~~----g~sL~I~~ 289 (940)
.|....+.+|++++|.|.+.+.| .+.|.|+|+ +..+. ...++.+..+ ..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 35567889999999999999875 679999994 22210 1245555432 24699999
Q ss_pred eccCCCeEEEEEEEeCCCC---ce--eEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCC-----eEEEEe-
Q psy11143 290 VRESDAGVYNCVAQNSEGS---AE--SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-----RISWSK- 358 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs---~~--~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p-----~i~W~k- 358 (940)
++.+|+|.|+|.|.|..|. .. ....|.|. .+|.+...|....+.+|++++|.|.+.+.|.+ .|.|+|
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~--~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS--SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQ 163 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC--CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeec--ccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEE
Confidence 9999999999999998763 11 23445554 56777777888889999999999999999876 999999
Q ss_pred -CCeeec------------cCCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeE-EEEEEEEEecC
Q psy11143 359 -DEAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVTGE 412 (940)
Q Consensus 359 -~g~~i~------------~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~-~~s~~L~V~~~ 412 (940)
++..+. ...++.+.. ..+|.|.+++.+|+|.|+|.|.|..+.. .....|.|..+
T Consensus 164 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 164 KPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp CTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred CCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 554331 124555433 3479999999999999999999964422 22446777644
No 243
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=1.3e-16 Score=169.89 Aligned_cols=177 Identities=16% Similarity=0.202 Sum_probs=128.4
Q ss_pred cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCc--eEEeeeceEEEeecccCCCceEEEEEEcCC
Q psy11143 137 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRN--HKIHRTGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 137 ~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~--~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
+.|.+...|.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+..... ......+.|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 83 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 83 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCC
Confidence 45777777766 8899999999999875 4568999999877642110 111234579999999999999999998864
Q ss_pred cc--eeeeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecCeEEEEeee
Q psy11143 215 GE--DVAEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGV 290 (940)
Q Consensus 215 g~--~s~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v 290 (940)
+. .+..+.|.|.. .+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+.. .......+..|.|.++
T Consensus 84 ~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~--~~~~~~~~~~l~I~~v 159 (242)
T 1p6f_A 84 LWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV--QRGYGKVQAEFPLGPV 159 (242)
T ss_dssp EECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE--EEEECSSEEEEEEEEC
T ss_pred ccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc--cccCCCceEEEEeCCC
Confidence 43 34556666763 245555444 3568899999999998764 469999999987653 1122233456999999
Q ss_pred ccCCCeEEEEEEEeCC---CCceeEEEEEEee
Q psy11143 291 RESDAGVYNCVAQNSE---GSAESVAMIRING 319 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~---Gs~~~s~~l~V~~ 319 (940)
+.+|+|.|+|.+.|.. ...+....|.|..
T Consensus 160 ~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 160 TTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp CGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred ccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 9999999999999874 2334456666764
No 244
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=3.3e-16 Score=165.79 Aligned_cols=180 Identities=16% Similarity=0.310 Sum_probs=126.3
Q ss_pred cCCceeecCCCcEEEEEEeCCCC--CCeEEEeeCC--eec-----------------cccCceEEee-----eceEEEee
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKDE--AEF-----------------VEDRNHKIHR-----TGSLRLYN 197 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~g--~~i-----------------~~~~~~~~~~-----~~sL~I~~ 197 (940)
.+....+.+|++++|.|.+.+.| .+.|.|+++. ..+ ....++.+.. ..+|.|.+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNS 87 (247)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECc
Confidence 34567899999999999999877 6789999832 111 0123444433 23699999
Q ss_pred cccCCCceEEEEEEcCCcc--eeeeeeeeecCC--------------CCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeE
Q psy11143 198 IGPQDSGLYRCTASNLLGE--DVAEGYLTVTGA--------------PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQM 261 (940)
Q Consensus 198 v~~~DsG~YtC~a~N~~g~--~s~s~~L~V~~~--------------~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~I 261 (940)
++.+|+|.|+|.+.|..+. ......|.|... ++.+...+....+.+|++++|.|.+.+.|.+.+
T Consensus 88 v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v 167 (247)
T 2ghw_B 88 LRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNL 167 (247)
T ss_dssp CCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCE
T ss_pred CCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceE
Confidence 9999999999999997332 233456777643 344555667778999999999999999999999
Q ss_pred EEEE--CCeecC------------CCCceEEeec--CeEEEEeeeccCCCeEEEEEEEeCCCCce-eEEEEEEeeccCC
Q psy11143 262 TWFH--DGNSLD------------SDDHVTYEHD--GFVLVLNGVRESDAGVYNCVAQNSEGSAE-SVAMIRINGHRAP 323 (940)
Q Consensus 262 tW~k--~g~~l~------------~~~~~~~~~~--g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~-~s~~l~V~~~~~P 323 (940)
.|+| ++..+. ...++..... ..+|+|.++..+|+|.|+|.|.|...... ....|.|....+|
T Consensus 168 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~~~~~p 246 (247)
T 2ghw_B 168 AWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVKSGLVP 246 (247)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEECCSCCC
T ss_pred EEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEECCCCCC
Confidence 9999 555431 1234444322 23599999999999999999998643322 2345666543333
No 245
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.70 E-value=8e-17 Score=171.67 Aligned_cols=184 Identities=15% Similarity=0.223 Sum_probs=128.4
Q ss_pred eeCCCeeEEecCCeEEEEEEEeeeC--CCeEEEEEC--Ceec-----------------CCCCceEEeec----CeEEEE
Q psy11143 233 IQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSL-----------------DSDDHVTYEHD----GFVLVL 287 (940)
Q Consensus 233 ~~~p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~--g~~l-----------------~~~~~~~~~~~----g~sL~I 287 (940)
...+....+.+|++++|.|.+.+.+ .+.+.|+|. +..+ ....++.+..+ ..+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3446677889999999999998854 779999982 2111 11234444432 234999
Q ss_pred eeeccCCCeEEEEEEEeCCCCce-eEEEEEEee-------------ccCCeEEEcCCceeecCCCeEEEEEeecCcCCC-
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSAE-SVAMIRING-------------HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP- 352 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~~-~s~~l~V~~-------------~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p- 352 (940)
.+++.+|+|.|+|.+.|..+... ....+.|.. ..+|.+...|....+.+|++|+|.|.+.+.|.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 99999999999999999665542 345566653 135677777888899999999999999999887
Q ss_pred ---eEEEEeC--Ceeec------------cCCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeEEE-EEEEEEec
Q psy11143 353 ---RISWSKD--EAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTG 411 (940)
Q Consensus 353 ---~i~W~k~--g~~i~------------~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~~L~V~~ 411 (940)
.+.|+|+ +.... ...++.... ..+|.|.+++.+|+|.|+|.|.|..+.... ...|.|.+
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 9999984 22111 123444433 236999999999999999999996543322 45688887
Q ss_pred CCCCC
Q psy11143 412 ENSVE 416 (940)
Q Consensus 412 ~~~~~ 416 (940)
.+..+
T Consensus 245 ~~~~~ 249 (253)
T 3uzq_A 245 PLEHH 249 (253)
T ss_dssp C----
T ss_pred CCCCc
Confidence 65443
No 246
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.70 E-value=5.7e-17 Score=167.28 Aligned_cols=170 Identities=17% Similarity=0.259 Sum_probs=123.0
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEeec------------CCCCeEEE--eeceEEEEcccccCCCe
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD------------SDDHVTYE--HDGFVLVLNGVRESDAG 112 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I~------------~~~~~~~~--~~gs~L~I~~v~~~DsG 112 (940)
...| .+.+.+|++++|.|.+. |.+.|.|+|+ +..+. ...++.+. .....|.|.+++.+|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 81 (211)
T 3tv3_L 5 TQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEA 81 (211)
T ss_dssp BCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCE
T ss_pred EeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCE
Confidence 3344 78899999999999998 8889999994 22211 12233333 22346899999999999
Q ss_pred EEEEEEEeCCCc--eEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC--CCCeEEEeeCCeeccccC---
Q psy11143 113 VYNCVAQNSEGS--AESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKDEAEFVEDR--- 183 (940)
Q Consensus 113 ~YtC~a~n~~g~--~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~--P~p~ItW~k~g~~i~~~~--- 183 (940)
.|+|.+.+..+. ....+.|.|... .+|.+...+....+.+|+.++|.|.+.+. |.+.+.|+++|..+....
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 161 (211)
T 3tv3_L 82 VYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETT 161 (211)
T ss_dssp EEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccC
Confidence 999999998873 333556666632 35677776666666689999999999984 357999999998875411
Q ss_pred ------ceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeee
Q psy11143 184 ------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 221 (940)
Q Consensus 184 ------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~ 221 (940)
.........|.|.++..+|+|.|+|.|.|..+....++
T Consensus 162 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 162 TPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 11112234689999999999999999999877655443
No 247
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.70 E-value=1.3e-16 Score=169.15 Aligned_cols=173 Identities=17% Similarity=0.253 Sum_probs=116.9
Q ss_pred CCCeeEEecCCeEEEEEEEeeeCCCe-----EEEEECCeecCCC--------C-------ceEE-----eecCeEEEEee
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHPLPQ-----MTWFHDGNSLDSD--------D-------HVTY-----EHDGFVLVLNG 289 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P~p~-----ItW~k~g~~l~~~--------~-------~~~~-----~~~g~sL~I~~ 289 (940)
.+....+..|++++|.|.+.|.|.+. |.|++++...... . +..+ .....+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45567888999999999999988775 9999974322110 0 0000 01122499999
Q ss_pred eccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCeeeccC-
Q psy11143 290 VRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVED- 366 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~i~~~- 366 (940)
++.+|+|.|+|.+.|..+.....+.|.|. .+|.+...+. .....|+.++|.|.+.| .|.| .|+|++++..+...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~--~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~ 165 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVV--ASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPI 165 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE--BCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEe--cCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcc
Confidence 99999999999999988877666677765 4777776665 34556788899999999 8999 99999998533211
Q ss_pred --------------CcEEEeeeceEEEecCCCCCCeEEEEEEEeCCee--EEEEEEEEEe
Q psy11143 367 --------------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE--DVAEGYLTVT 410 (940)
Q Consensus 367 --------------~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~--~~~s~~L~V~ 410 (940)
........+.|.|.....+|.|.|+|.|.|..+. ...++.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 166 EISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp EECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred ccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 1111122346888899999999999999999986 5556666663
No 248
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=8.1e-17 Score=167.32 Aligned_cols=172 Identities=16% Similarity=0.261 Sum_probs=120.8
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEEC--CeecC-----------------CCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~--g~~l~-----------------~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.| .+.|.|+|+ +..+. ...++.+..+ ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 4566788999999999999875 679999997 33221 1235554432 246999999
Q ss_pred ccCCCeEEEEEEEeCCCCc----eeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCee
Q psy11143 291 RESDAGVYNCVAQNSEGSA----ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAE 362 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs~----~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~ 362 (940)
+.+|+|.|+|.+.|..+.. ...+.|.|.. ..+|.+...+....+.+|+.++|.|.+.| .|.| .|+|++++..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 9999999999999987422 1244566654 23466665554446778999999999998 8999 9999999875
Q ss_pred ecc--CCc----EEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy11143 363 FVE--DRN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 408 (940)
Q Consensus 363 i~~--~~~----~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~ 408 (940)
+.. ... -.....+.|.|... ..|.|.|+|.|.|..|.......|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 167 SGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp TTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEECC
T ss_pred cceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEecC
Confidence 421 110 01112346888444 4466999999999998766555443
No 249
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=2e-16 Score=169.22 Aligned_cols=176 Identities=18% Similarity=0.275 Sum_probs=122.2
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEe---ec-------------CCCCeEEEee----ceEEEEccc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNS---LD-------------SDDHVTYEHD----GFVLVLNGV 106 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~---I~-------------~~~~~~~~~~----gs~L~I~~v 106 (940)
+|..+.+.+|++|+|.|.+.+.| .+.|.|+|+ +.. +. ...++.+..+ ...|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 34556799999999999999875 679999986 221 10 1234444432 246899999
Q ss_pred ccCCCeEEEEEEEeCCC------ceE---EEEEEEEeccc-------------CCeeEecCCceeecCCCcEEEEEEeCC
Q psy11143 107 RESDAGVYNCVAQNSEG------SAE---SVAMIRINGHR-------------APRLVVKPFDMRAPAGSSVEIPCKPDG 164 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g------~~~---~~~~L~V~~~~-------------~P~~~~~p~~~~v~~Ge~vtL~C~v~g 164 (940)
+.+|+|.|+|.|.|..| ... ..+.|.|...+ .+.+...+....+.+|++++|.|.+.+
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 165 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQ 165 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSS
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECC
Confidence 99999999999999854 111 23466776532 122344466778999999999999999
Q ss_pred CCCCeEEEee--CCeecc------------ccCceEEee---eceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 165 EPLPRISWSK--DEAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 165 ~P~p~ItW~k--~g~~i~------------~~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.|.+.+.|++ ++..+. ...++.... ..+|.|.+++.+|+|.|+|.|.|........+.|.|.
T Consensus 166 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~ 244 (257)
T 1f3r_B 166 NINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELK 244 (257)
T ss_dssp CCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCS
T ss_pred cCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEe
Confidence 8888999999 554331 023333322 2379999999999999999999865222233455554
No 250
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.69 E-value=3.1e-16 Score=159.53 Aligned_cols=156 Identities=13% Similarity=0.239 Sum_probs=118.0
Q ss_pred CCeeEEecCCeEEEEEEEe--eeCCCeEEEEE--CCeec----------CCCCceEEeecCeEEEEeeeccCCCeEEEEE
Q psy11143 236 PVSTTYSTGSTSRITCLVE--GHPLPQMTWFH--DGNSL----------DSDDHVTYEHDGFVLVLNGVRESDAGVYNCV 301 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~--G~P~p~ItW~k--~g~~l----------~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~ 301 (940)
........|++|+|.|... +.+.+.|.|++ ++..+ ....++.+..+|+ |.|.+++.+|+|.|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngs-L~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGT-LKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSC-EEECSCCGGGCEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCC-EEECCCChhhCEEEEEE
Confidence 3456678999999999542 34567999999 88776 3456777777775 99999999999999999
Q ss_pred EEeCCCCcee--EEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEE
Q psy11143 302 AQNSEGSAES--VAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLR 378 (940)
Q Consensus 302 A~N~~Gs~~~--s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~ 378 (940)
|.|..|.... .+.|.|... .+|.+... +.+++|.|.+.+.|.|.|.|+++|..+ .. ....|.
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~--------~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~------~~~~i~ 149 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQERVSKPKISWT--------CINTTLTCEVMNGTDPELNLYQDGKHL-KL------SQRVIT 149 (182)
T ss_dssp EEETTSCEEEEEEEEEEEECCCCCCEEEEE--------TTTTEEEEECSSCSSCEEEEEESSCEE-EE------ESSCEE
T ss_pred EEeCCCceeEEEEEEEEEcCcCCCCEEEEc--------cCcEEEEeEccCCCCCEEEEEECCEEC-CC------CCcEEE
Confidence 9999887654 445666532 23444432 237999999999999999999999877 11 222444
Q ss_pred EecCCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy11143 379 LYNIGPQDSGLYRCTASNLLGEDVAEGYLT 408 (940)
Q Consensus 379 I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~ 408 (940)
+.. ..+|+|.|+|.|.|..|.......+.
T Consensus 150 ~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 150 HKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp EEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred Eec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 433 57899999999999999988877664
No 251
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.69 E-value=3.8e-16 Score=164.27 Aligned_cols=166 Identities=20% Similarity=0.341 Sum_probs=118.2
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEee---------------cCCCCeEEEe---eceEEEEcccc
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSL---------------DSDDHVTYEH---DGFVLVLNGVR 107 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I---------------~~~~~~~~~~---~gs~L~I~~v~ 107 (940)
+...|..+.+.+|++|+|.|. .+.|.+.|.|+|+ +..+ ....++.+.. ....|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 455678889999999999999 7888899999995 2111 1123444432 23468999999
Q ss_pred cCCCeEEEEEEEeCCCce---E--EEEEEEEecccC----------CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEE
Q psy11143 108 ESDAGVYNCVAQNSEGSA---E--SVAMIRINGHRA----------PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISW 172 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g~~---~--~~~~L~V~~~~~----------P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW 172 (940)
.+|+|.|+|.+.|..|.. . ....|.|..... +.+...+....+.+|++++|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 999999999999876521 1 134566654321 1556667788899999999999999999999999
Q ss_pred eeCCe--ec------------cccCceEEee-----eceEEEeecccCCCceEEEEEEcCC
Q psy11143 173 SKDEA--EF------------VEDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 173 ~k~g~--~i------------~~~~~~~~~~-----~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
++++. .. ....++.... ..+|.|.+++.+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99531 11 1123343331 2479999999999999999999863
No 252
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.69 E-value=6.2e-16 Score=165.58 Aligned_cols=176 Identities=16% Similarity=0.287 Sum_probs=124.9
Q ss_pred eCCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEeec-----------------CCCCeEEEee----ceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD-----------------SDDHVTYEHD----GFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~I~-----------------~~~~~~~~~~----gs~L~I~ 104 (940)
.+|..+.+.+|++|+|.|.+.+.| .+.|.|+|+ +..+. ...++.+..+ ...|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 446678899999999999998875 579999994 22210 1234444432 2468999
Q ss_pred ccccCCCeEEEEEEEeCCCc---eEE--EEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCC-----eEEEee
Q psy11143 105 GVRESDAGVYNCVAQNSEGS---AES--VAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-----RISWSK 174 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g~---~~~--~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-----~ItW~k 174 (940)
+++.+|+|.|+|.+.|..|. ... .+.|.|. ..|.+...|....+.+|++++|.|.+.+.|.+ .+.|+|
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~--~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS--SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC--CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeec--ccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 99999999999999998663 111 3455554 45666677778889999999999999998765 999999
Q ss_pred --CCeecc------------ccCceEEee---eceEEEeecccCCCceEEEEEEcCCcc-eeeeeeeeecC
Q psy11143 175 --DEAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGE-DVAEGYLTVTG 227 (940)
Q Consensus 175 --~g~~i~------------~~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~g~-~s~s~~L~V~~ 227 (940)
++..+. ...++.... ..+|.|.+++.+|+|.|+|.+.+.... -...+.|.|..
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 163 QKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp ECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred ECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 555431 022333322 346999999999999999999885332 22334566653
No 253
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.69 E-value=1.8e-16 Score=168.01 Aligned_cols=172 Identities=17% Similarity=0.241 Sum_probs=114.7
Q ss_pred CCCcEEEecCCeEEEEEEeeccCCCe-----EEEEECCEeecC---------------CCCeEEE-----eeceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHPLPQ-----MTWFHDGNSLDS---------------DDHVTYE-----HDGFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P~p~-----V~W~kdg~~I~~---------------~~~~~~~-----~~gs~L~I~~ 105 (940)
.|..+.+.+|+.++|.|.+.+.|.+. |.|+|++..... ..+.++. .....|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45567899999999999999887765 999996432210 0011111 1122389999
Q ss_pred cccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeecccc-
Q psy11143 106 VRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVED- 182 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i~~~- 182 (940)
++.+|+|.|+|.+.+..+.....+.|.|.. +|.+...+. ..+..|+.+.|.|.+.+ .|.+ .|+|++++..+...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~--~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~ 165 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVA--SPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPI 165 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEB--CCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEec--CCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcc
Confidence 999999999999999887766677777765 566665554 34556788889999998 8988 99999988643211
Q ss_pred --------------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceee--eeeeee
Q psy11143 183 --------------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA--EGYLTV 225 (940)
Q Consensus 183 --------------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~--s~~L~V 225 (940)
....+.....|.|.....+|.|.|+|.|.|..+.... .+.|.|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 166 EISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp EECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 1112223346888888899999999999999887444 444444
No 254
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.69 E-value=3.7e-16 Score=169.07 Aligned_cols=183 Identities=17% Similarity=0.298 Sum_probs=127.5
Q ss_pred CeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCe-----ec---------CCCCceEEeecC--eEEEEeeeccC
Q psy11143 230 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGN-----SL---------DSDDHVTYEHDG--FVLVLNGVRES 293 (940)
Q Consensus 230 p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~-----~l---------~~~~~~~~~~~g--~sL~I~~v~~~ 293 (940)
+.+...|....+.+|++++|.|.+.+.|.+.|.|+|++. .+ ....++.+..++ .+|.|.+++.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 345556778889999999999999999999999998642 11 113355544332 35999999999
Q ss_pred CCeEEEEEEEeCCCCc-eeEEEEEEeec------------cCCeEEEcCCceeecCCCeEEEEEeecCcC--CCeEEEEe
Q psy11143 294 DAGVYNCVAQNSEGSA-ESVAMIRINGH------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWSK 358 (940)
Q Consensus 294 DsG~YtC~A~N~~Gs~-~~s~~l~V~~~------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p~i~W~k 358 (940)
|+|.|+|.|.|..+.. .....|.|... .++..+..|....+.+|++++|.|.+.+.| .+.|.|+|
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k 172 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVR 172 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEE
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEE
Confidence 9999999999976542 22345665542 122334456678899999999999999887 48999999
Q ss_pred CC--eee-----------------ccCCcEEEeee-----ceEEEecCCCCCCeEEEEEEEeCC---ee--EEEEEEEEE
Q psy11143 359 DE--AEF-----------------VEDRNHKIHRT-----GSLRLYNIGPQDSGLYRCTASNLL---GE--DVAEGYLTV 409 (940)
Q Consensus 359 ~g--~~i-----------------~~~~~~~i~~~-----~sL~I~~v~~~D~G~YtC~A~N~~---G~--~~~s~~L~V 409 (940)
++ ... ....++.+..+ .+|.|.+++.+|+|.|+|.|.|.. +. -.....|.|
T Consensus 173 ~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V 252 (276)
T 3auv_A 173 QAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTV 252 (276)
T ss_dssp ECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEE
T ss_pred cCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEE
Confidence 63 111 01346666543 279999999999999999999983 21 112356777
Q ss_pred ecC
Q psy11143 410 TGE 412 (940)
Q Consensus 410 ~~~ 412 (940)
...
T Consensus 253 ~~~ 255 (276)
T 3auv_A 253 SSA 255 (276)
T ss_dssp C--
T ss_pred ccc
Confidence 643
No 255
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.69 E-value=4.7e-16 Score=164.99 Aligned_cols=166 Identities=19% Similarity=0.299 Sum_probs=118.9
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCe-----e---------cCCCCceEEeecC--eEEEEeeeccCC
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGN-----S---------LDSDDHVTYEHDG--FVLVLNGVRESD 294 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~-----~---------l~~~~~~~~~~~g--~sL~I~~v~~~D 294 (940)
.+...|....+.+|++++|.|.+.+.|.+.+.|+|+.. . .....++.....+ .+|.|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 34455677889999999999999999999999998531 0 1112344433322 359999999999
Q ss_pred CeEEEEEEEeCCCCce-eEEEEEEeec-----------------cCCeEEEcCCceeecCCCeEEEEEeecCcC--CCeE
Q psy11143 295 AGVYNCVAQNSEGSAE-SVAMIRINGH-----------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRI 354 (940)
Q Consensus 295 sG~YtC~A~N~~Gs~~-~s~~l~V~~~-----------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p~i 354 (940)
+|.|+|.|.|..+... ....|.|... .+|.+...+....+.+|++++|.|.+.+.| .+.+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 165 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWM 165 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEE
Confidence 9999999998765432 2345666532 233444556667899999999999999877 7899
Q ss_pred EEEeC--Ceeec-----------------cCCcEEEeeec-----eEEEecCCCCCCeEEEEEEEe
Q psy11143 355 SWSKD--EAEFV-----------------EDRNHKIHRTG-----SLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 355 ~W~k~--g~~i~-----------------~~~~~~i~~~~-----sL~I~~v~~~D~G~YtC~A~N 396 (940)
.|+|+ +..+. ...++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 166 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 166 NWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 99997 33221 12456655433 699999999999999999997
No 256
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.68 E-value=4.5e-16 Score=166.13 Aligned_cols=179 Identities=17% Similarity=0.270 Sum_probs=126.8
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eec-----------------CCCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL-----------------DSDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l-----------------~~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.+ .+.+.|++.. ..+ ....++.+..+ ..+|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3446688999999999999866 6799999842 111 01234444432 234999999
Q ss_pred ccCCCeEEEEEEEeC----CCCceeEEEEEEeec--------------cCCeEEEcCCceeecCCCeEEEEEeecCcCCC
Q psy11143 291 RESDAGVYNCVAQNS----EGSAESVAMIRINGH--------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP 352 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~----~Gs~~~s~~l~V~~~--------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p 352 (940)
+.+|+|.|.|.+.|. .+.......|.|... .+|.+...|....+.+|++|+|.|.+.+.|.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 168 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS 168 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc
Confidence 999999999999987 233333456666532 26778888888899999999999999999999
Q ss_pred eEEEEeC--Ceeec------------cCCcEEEeee---ceEEEecCCCCCCeEEEEEEEeCCeeEEE-EEEEEEecCCC
Q psy11143 353 RISWSKD--EAEFV------------EDRNHKIHRT---GSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTGENS 414 (940)
Q Consensus 353 ~i~W~k~--g~~i~------------~~~~~~i~~~---~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~~L~V~~~~~ 414 (940)
.+.|+|. +.... ...++.+... .+|.|.+++.+|+|.|+|.|.|..+.... .+.|.|++.+.
T Consensus 169 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 169 NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 9999984 22111 1245554433 35999999999999999999996554333 46788887643
No 257
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.68 E-value=1.6e-15 Score=162.17 Aligned_cols=181 Identities=20% Similarity=0.302 Sum_probs=128.3
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec-------------CCCCceEEe----ecCeEEEEeeec
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL-------------DSDDHVTYE----HDGFVLVLNGVR 291 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l-------------~~~~~~~~~----~~g~sL~I~~v~ 291 (940)
.+...|....+.+|++++|.|.+.+.|.+.+.|+|.. ... ....++.+. ....+|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3455677788999999999999999999999999832 111 112233332 122359999999
Q ss_pred cCCCeEEEEEEEeCCCCce----eEEEEEEee------------------ccCCeEEEcCCceeecCCCeEEEEEeecCc
Q psy11143 292 ESDAGVYNCVAQNSEGSAE----SVAMIRING------------------HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE 349 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~~----~s~~l~V~~------------------~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~ 349 (940)
.+|+|.|+|.+.|..+... ....|.|.. ..+|.+...|....+.+|++++|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 9999999999999865322 234566653 246778888888888999999999999987
Q ss_pred CCCeEEEEeCC--ee---ec------------cCCcEEEee----eceEEEecCCCCCCeEEEEEEEeCCeeEEE--EEE
Q psy11143 350 PLPRISWSKDE--AE---FV------------EDRNHKIHR----TGSLRLYNIGPQDSGLYRCTASNLLGEDVA--EGY 406 (940)
Q Consensus 350 P~p~i~W~k~g--~~---i~------------~~~~~~i~~----~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~--s~~ 406 (940)
.|.+.|+|.. .. +. ...++.+.. ..+|.|.+++.+|+|.|+|.|.|..|.... ...
T Consensus 165 -~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~ 243 (256)
T 3tf7_C 165 -HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSK 243 (256)
T ss_dssp -CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEE
T ss_pred -ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeE
Confidence 6799999832 11 10 022333322 337999999999999999999998775543 345
Q ss_pred EEEecC
Q psy11143 407 LTVTGE 412 (940)
Q Consensus 407 L~V~~~ 412 (940)
|.|...
T Consensus 244 l~v~~~ 249 (256)
T 3tf7_C 244 LTVLEL 249 (256)
T ss_dssp EEEECG
T ss_pred EEEEcc
Confidence 666643
No 258
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=4.7e-17 Score=168.01 Aligned_cols=166 Identities=16% Similarity=0.273 Sum_probs=120.0
Q ss_pred CCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEeec------------CCCCeEEEe--eceEEEEcccccCCCeEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD------------SDDHVTYEH--DGFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I~------------~~~~~~~~~--~gs~L~I~~v~~~DsG~Yt 115 (940)
|..+.+.+|+.++|.|.+.+.|.+.|.|+|+ |..+. ...++.+.. ....|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 7788999999999999998888788999985 33221 023444432 2246899999999999999
Q ss_pred EEEEeCCCce-E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC-CeEEEeeCCeeccccCceE--
Q psy11143 116 CVAQNSEGSA-E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFVEDRNHK-- 186 (940)
Q Consensus 116 C~a~n~~g~~-~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p~ItW~k~g~~i~~~~~~~-- 186 (940)
|.+.|..+.. . ....+.|... .+|.+...+....+.+|+.++|.|.+.|. |. +.|+|+++|..+.......
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 9999732222 1 1345666432 34666665555556689999999999986 54 7999999998875432100
Q ss_pred ------EeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 187 ------IHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 187 ------~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
....+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 2223569999999999999999999987653
No 259
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=3.9e-17 Score=168.61 Aligned_cols=165 Identities=16% Similarity=0.288 Sum_probs=120.7
Q ss_pred CCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--CeecC------------CCCceEEeec--CeEEEEeeeccCCCeEEE
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD------------SDDHVTYEHD--GFVLVLNGVRESDAGVYN 299 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l~------------~~~~~~~~~~--g~sL~I~~v~~~DsG~Yt 299 (940)
|....+.+|++++|.|.+.+.|.+.|.|+|+ +..+. ...++.+... ..+|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 6677899999999999998888889999985 33221 1244544433 236999999999999999
Q ss_pred EEEEeCCCCc---eeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CC-CeEEEEeCCeeeccCCcEE--
Q psy11143 300 CVAQNSEGSA---ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFVEDRNHK-- 370 (940)
Q Consensus 300 C~A~N~~Gs~---~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~-p~i~W~k~g~~i~~~~~~~-- 370 (940)
|.|.|..+.. .....+.|.. ..+|.+...+....+.+|+.++|.|.+.|. |. |.|+|+|+|..+.......
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 9999842221 1223455532 356777765554455679999999999987 55 7999999998875432100
Q ss_pred ------EeeeceEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 371 ------IHRTGSLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 371 ------i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
....++|.|.++..+|+|.|+|.|.|..+.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 122357999999999999999999998765
No 260
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.68 E-value=2.4e-16 Score=163.30 Aligned_cols=169 Identities=15% Similarity=0.274 Sum_probs=117.7
Q ss_pred CCCcEEEecCCeEEEEEEee-ccC-CCeEEEEECC--Eeec------------CCCCeEEEe--eceEEEEcccccCCCe
Q psy11143 51 RPVSTTYSTGSTSRITCLVE-GHP-LPQMTWFHDG--NSLD------------SDDHVTYEH--DGFVLVLNGVRESDAG 112 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~-g~P-~p~V~W~kdg--~~I~------------~~~~~~~~~--~gs~L~I~~v~~~DsG 112 (940)
+|..+.+.+|++++|.|.+. +.+ .+.|.|+|++ ..+. ...++.... ....|.|.+++.+|+|
T Consensus 6 qp~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 6 QPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 36778899999999999964 442 5799999954 2110 122344332 2346899999999999
Q ss_pred EEEEEEEeCCCce--EEEEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeecccc-Cc--
Q psy11143 113 VYNCVAQNSEGSA--ESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVED-RN-- 184 (940)
Q Consensus 113 ~YtC~a~n~~g~~--~~~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i~~~-~~-- 184 (940)
.|+|.+.|..+.. .....|.|... .+|.+...+....+..|+.++|.|.+.| .|.+ .|+|+++|..+... ..
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 165 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESV 165 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEE
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEec
Confidence 9999999987621 12445666543 3466665444333446899999999998 5554 89999999877543 10
Q ss_pred -------eEEeeeceEEEeecccCCCceEEEEEEcCCcceee
Q psy11143 185 -------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA 219 (940)
Q Consensus 185 -------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~ 219 (940)
..+...+.|.|..+..+|+|.|+|.|.|.......
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 166 TEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred CcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 11122346999999999999999999997755443
No 261
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.68 E-value=7.5e-16 Score=166.68 Aligned_cols=170 Identities=17% Similarity=0.298 Sum_probs=121.1
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCE-----eec---------CCCCeEEEee--ceEEEEccccc
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGN-----SLD---------SDDHVTYEHD--GFVLVLNGVRE 108 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~-----~I~---------~~~~~~~~~~--gs~L~I~~v~~ 108 (940)
.+.+...|..+.+.+|++|+|.|.+.+.|.+.|.|+|++. .+. ...++..... ...|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4556777888999999999999999998889999998642 121 1234444322 23689999999
Q ss_pred CCCeEEEEEEEeCCCceE-EEEEEEEeccc------------CCeeEecCCceeecCCCcEEEEEEeCCCC--CCeEEEe
Q psy11143 109 SDAGVYNCVAQNSEGSAE-SVAMIRINGHR------------APRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWS 173 (940)
Q Consensus 109 ~DsG~YtC~a~n~~g~~~-~~~~L~V~~~~------------~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~ 173 (940)
+|+|.|+|.+.|..+... ..+.|.|...+ ++.+...+....+.+|++++|.|.+.+.| .+.+.|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 999999999998755422 23456665432 12334455678899999999999999876 5899999
Q ss_pred eCC--eec-----------------cccCceEEeee-----ceEEEeecccCCCceEEEEEEcCC
Q psy11143 174 KDE--AEF-----------------VEDRNHKIHRT-----GSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 174 k~g--~~i-----------------~~~~~~~~~~~-----~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
+++ ..+ ....++.+..+ .+|.|.+++.+|+|.|+|.+.|..
T Consensus 172 k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 172 RQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 953 211 01234444432 279999999999999999999973
No 262
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.68 E-value=2.5e-16 Score=162.14 Aligned_cols=173 Identities=17% Similarity=0.216 Sum_probs=119.3
Q ss_pred CCeeEEecCCeEEEEEEEeeeCCC---eEEEEECCeecC----------------CCCceEE---------eecCeEEEE
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSLD----------------SDDHVTY---------EHDGFVLVL 287 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P~p---~ItW~k~g~~l~----------------~~~~~~~---------~~~g~sL~I 287 (940)
|....+..|++++|.|.+.+.+.+ .|+|+|++..+. ...+... .....+|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 445678899999999999987766 489999865431 0011111 011234999
Q ss_pred eeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeCCeeeccC
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVED 366 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~g~~i~~~ 366 (940)
.+++.+|+|.|+|.|.|..+.........+ ...+|.+...+.......++.+.+.|.+ .+.|.+.+.|++++..+...
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLR-VIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEE-EEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeee-eecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 999999999999999998776655433222 2345555555555566677777777764 56788899999987654332
Q ss_pred CcEEE------eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEE
Q psy11143 367 RNHKI------HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 409 (940)
Q Consensus 367 ~~~~i------~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V 409 (940)
..... ...+.|.|.++..+|+|.|+|.|+|..|....++.+++
T Consensus 167 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 167 TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 22211 12346999999999999999999999887655554444
No 263
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.68 E-value=1.9e-16 Score=164.95 Aligned_cols=172 Identities=15% Similarity=0.252 Sum_probs=122.8
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eecC-------------------CCCceEEeec----CeEEEEe
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD-------------------SDDHVTYEHD----GFVLVLN 288 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l~-------------------~~~~~~~~~~----g~sL~I~ 288 (940)
+....+.+|++++|.|.+.+.| .+.+.|+|+. ..+. ...++.+..+ ..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 3456788999999999999865 6799999853 2110 1235555432 2369999
Q ss_pred eeccCCCeEEEEEEEeCCC-----CceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeC
Q psy11143 289 GVRESDAGVYNCVAQNSEG-----SAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKD 359 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~G-----s~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~ 359 (940)
+++.+|+|.|.|.+.|..+ .......|.|.. ..+|.+...+....+.+|+.++|.|.+.|. |.| .|+|+++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 166 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 166 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecC
Confidence 9999999999999999764 222334666654 245666655444456789999999999986 988 9999999
Q ss_pred CeeeccCCcE------EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy11143 360 EAEFVEDRNH------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 408 (940)
Q Consensus 360 g~~i~~~~~~------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~ 408 (940)
|..+...... .....+.|.|..+..+| |.|+|.|.|..|.......|.
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 167 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp TBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred CeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 8754321100 11223579999999899 999999999999766555443
No 264
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=5.5e-16 Score=163.22 Aligned_cols=165 Identities=18% Similarity=0.345 Sum_probs=121.7
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeC----CCeEEEEECC--eec------------CCCCceEEeecC--eEEEEeeec
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHP----LPQMTWFHDG--NSL------------DSDDHVTYEHDG--FVLVLNGVR 291 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P----~p~ItW~k~g--~~l------------~~~~~~~~~~~g--~sL~I~~v~ 291 (940)
+...|....+.+|++++|.|.+.+.| .+.|.|+|+. ..+ ....++.+...+ .+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 44556778899999999999999988 7899999962 211 012345544332 359999999
Q ss_pred cCCCeEEEEEEEeCCCC-ceeEEEEEEeecc----CCeEEEcCCceeecCCCeEEEEEeecCcCC--CeEEEEeC--Cee
Q psy11143 292 ESDAGVYNCVAQNSEGS-AESVAMIRINGHR----APRLVVKPFDMRAPAGSSVEIPCKPDGEPL--PRISWSKD--EAE 362 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs-~~~s~~l~V~~~~----~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~--p~i~W~k~--g~~ 362 (940)
.+|+|.|+|.|.|..+. ....+.|.|.... ++.+...+....+.+|++++|.|.+.+.|. +.|.|+|+ +..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~ 163 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQG 163 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCC
Confidence 99999999999998664 3344567776532 234555677788999999999999999874 59999995 221
Q ss_pred e------c-----------cCCcEEEeee-----ceEEEecCCCCCCeEEEEEEEe
Q psy11143 363 F------V-----------EDRNHKIHRT-----GSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 363 i------~-----------~~~~~~i~~~-----~sL~I~~v~~~D~G~YtC~A~N 396 (940)
. . ...++.+..+ .+|.|.+++.+|+|.|+|.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 164 LEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred cEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 1 0 1235555443 4799999999999999999985
No 265
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.68 E-value=7.8e-16 Score=158.78 Aligned_cols=172 Identities=17% Similarity=0.254 Sum_probs=122.8
Q ss_pred eeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCC--eec------------cccCceEEee---eceEEEeecccCC
Q psy11143 140 RLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE--AEF------------VEDRNHKIHR---TGSLRLYNIGPQD 202 (940)
Q Consensus 140 ~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g--~~i------------~~~~~~~~~~---~~sL~I~~v~~~D 202 (940)
.+...+....+.+|++++|.|.+.+.|.+.+.|++.+ ... ....++.... ..+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 4555677889999999999999999999999999832 111 0123443332 3379999999999
Q ss_pred CceEEEEEEcCCcc-eeeeeeeeec--CCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCC--eEEEEECCeecCCCC--c
Q psy11143 203 SGLYRCTASNLLGE-DVAEGYLTVT--GAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSLDSDD--H 275 (940)
Q Consensus 203 sG~YtC~a~N~~g~-~s~s~~L~V~--~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p--~ItW~k~g~~l~~~~--~ 275 (940)
+|.|+|.+.|..+. ......|.|. ..+|.+...+....+..|+.++|.|.+.|.+++ .++|+++|..+.... .
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 162 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQS 162 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEE
T ss_pred CEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEec
Confidence 99999999987543 2334455553 245666665655566678899999999987643 899999999887531 1
Q ss_pred eEE--eecC-----eEEEEeeeccCCCeEEEEEEEeCCCCcee
Q psy11143 276 VTY--EHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 276 ~~~--~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~ 311 (940)
... ..++ ..|.|.....+|+|.|+|.|.|.......
T Consensus 163 ~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~ 205 (213)
T 3r06_A 163 VTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAI 205 (213)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE
T ss_pred cCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcce
Confidence 111 1112 24778888888999999999998765443
No 266
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.67 E-value=3.1e-16 Score=167.01 Aligned_cols=173 Identities=17% Similarity=0.292 Sum_probs=123.3
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccC-----CCeEEEEECCE--ee------------cCCCCeEEEee--ceEEEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHP-----LPQMTWFHDGN--SL------------DSDDHVTYEHD--GFVLVL 103 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P-----~p~V~W~kdg~--~I------------~~~~~~~~~~~--gs~L~I 103 (940)
.+.+...|..+.+.+|++|+|.|.+.+.| .+.|.|+|++. .+ ....++.+... ...|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 45566668889999999999999999887 68999999641 11 01234443322 236899
Q ss_pred cccccCCCeEEEEEEEeCCCceEE-EEEEEEecc-cCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeec
Q psy11143 104 NGVRESDAGVYNCVAQNSEGSAES-VAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEF 179 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~~~~-~~~L~V~~~-~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i 179 (940)
.+++.+|+|.|+|.+.+..+.... ...|.|... .+|.+...+....+.+|+.++|.|.+.+ .|.+ .|+|+++|..+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 999999999999999987654322 345666543 2466666554444557999999999988 4554 79999999877
Q ss_pred ccc-C---------ceEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 180 VED-R---------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 180 ~~~-~---------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
... . .........|.|.++..+|+|.|+|.|.|.....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 543 0 0111223469999999999999999999976543
No 267
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.67 E-value=8.9e-17 Score=166.34 Aligned_cols=155 Identities=19% Similarity=0.264 Sum_probs=108.7
Q ss_pred ecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC--
Q psy11143 150 APAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG-- 227 (940)
Q Consensus 150 v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~-- 227 (940)
+.+|++++|.|.+ |.+.|+|+|+|..+... ...+++|.|.+++.+|+|.|+|.+.+.. +....|.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~v~~~~ 84 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL----TEDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVYYRMGS 84 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE----ESSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEEEEC--
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC----CCCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEEEEEec
Confidence 4589999999998 78899999999887532 1234679999999999999999975432 2223333330
Q ss_pred ----------------------------CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCC-ceEE
Q psy11143 228 ----------------------------APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD-HVTY 278 (940)
Q Consensus 228 ----------------------------~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~-~~~~ 278 (940)
.++.+...+ .....+|++++|.|. |.|.|.|+|+|++..+.... ...+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~ 161 (204)
T 1sy6_A 85 ADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNI 161 (204)
T ss_dssp ----------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTE
T ss_pred cccccccccccccccccccccccccccccccceecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceE
Confidence 011122222 222338999999998 88999999999999886542 1122
Q ss_pred eecCeEEEEeee-ccCCCeEEEEEEEeCCCCc-eeEEEEEE
Q psy11143 279 EHDGFVLVLNGV-RESDAGVYNCVAQNSEGSA-ESVAMIRI 317 (940)
Q Consensus 279 ~~~g~sL~I~~v-~~~DsG~YtC~A~N~~Gs~-~~s~~l~V 317 (940)
...+.+|.|.++ ..+|+|.|+|.|.|..|.. +....|.+
T Consensus 162 ~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 162 GSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 223445999999 9999999999999999963 33444443
No 268
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.67 E-value=3.8e-16 Score=160.73 Aligned_cols=173 Identities=18% Similarity=0.271 Sum_probs=119.3
Q ss_pred CCcEEEecCCeEEEEEEeeccCCC---eEEEEECCEeecC----------------CCCeEEE---------eeceEEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHPLP---QMTWFHDGNSLDS----------------DDHVTYE---------HDGFVLVL 103 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P~p---~V~W~kdg~~I~~----------------~~~~~~~---------~~gs~L~I 103 (940)
|.++.+.+|++|+|.|.+.+.+.+ .|+|+|++..+.. ..+..+. .....|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 345678999999999999887765 4899998754310 0111111 12234899
Q ss_pred cccccCCCeEEEEEEEeCCCceEEE-EEEEEecccCCeeEecCCceeecCCCcEEEEEEeC-CCCCCeEEEeeCCeeccc
Q psy11143 104 NGVRESDAGVYNCVAQNSEGSAESV-AMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVE 181 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~~~~~-~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P~p~ItW~k~g~~i~~ 181 (940)
.+++.+|+|.|+|.+.+..+..... ..+.+. .+|.....+.......++.+.+.|.+. +.|.+.+.|++++..+..
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~ 165 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI--AQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAK 165 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE--BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeee--cCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccC
Confidence 9999999999999999987765553 333333 344555555556677788888877765 578889999998765543
Q ss_pred cCceE------EeeeceEEEeecccCCCceEEEEEEcCCcceee--eeeeeec
Q psy11143 182 DRNHK------IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA--EGYLTVT 226 (940)
Q Consensus 182 ~~~~~------~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~--s~~L~V~ 226 (940)
..... ....+.|.|.++..+|+|.|+|.|+|..+.... ++.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 166 DTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred CcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 22111 122346999999999999999999998877544 4455554
No 269
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.67 E-value=5e-16 Score=161.80 Aligned_cols=173 Identities=15% Similarity=0.245 Sum_probs=122.1
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---e---c-------------CCCCeEEEee----ceEEEE
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L---D-------------SDDHVTYEHD----GFVLVL 103 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I---~-------------~~~~~~~~~~----gs~L~I 103 (940)
+|..+.+.+|++++|.|.+.+.| .+.|.|+|+. .. + . ...++.+..+ ...|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 34566789999999999998865 6799999853 21 1 0 1234444432 246899
Q ss_pred cccccCCCeEEEEEEEeCCC-----ceEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEee
Q psy11143 104 NGVRESDAGVYNCVAQNSEG-----SAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSK 174 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g-----~~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k 174 (940)
.+++.+|+|.|.|.+.+..+ .....+.|.|... ..|.+...+....+.+|+.++|.|.+.|. |.| .|+|++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 86 NTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 165 (222)
T ss_dssp CSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEec
Confidence 99999999999999998764 1222456666642 34666555444456789999999999984 888 999999
Q ss_pred CCeeccccCce------EEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeee
Q psy11143 175 DEAEFVEDRNH------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 224 (940)
Q Consensus 175 ~g~~i~~~~~~------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~ 224 (940)
++..+...... .....+.|.|.++..+| |.|+|.|.|..+.......+.
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 166 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp GTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred CCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 98765321100 12223468999999889 999999999988766555443
No 270
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=6.2e-16 Score=162.83 Aligned_cols=166 Identities=19% Similarity=0.344 Sum_probs=120.5
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccC----CCeEEEEECC--Ee---ec---------CCCCeEEEee--ceEEEEccc
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHP----LPQMTWFHDG--NS---LD---------SDDHVTYEHD--GFVLVLNGV 106 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P----~p~V~W~kdg--~~---I~---------~~~~~~~~~~--gs~L~I~~v 106 (940)
.+...|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ .. +. ...++.+... ...|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 355667888999999999999999987 7899999952 21 10 1234444322 236899999
Q ss_pred ccCCCeEEEEEEEeCCCc-eEEEEEEEEeccc----CCeeEecCCceeecCCCcEEEEEEeCCCC--CCeEEEeeC--Ce
Q psy11143 107 RESDAGVYNCVAQNSEGS-AESVAMIRINGHR----APRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKD--EA 177 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g~-~~~~~~L~V~~~~----~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~--g~ 177 (940)
+.+|+|.|+|.+.|..+. ....+.|.|...+ ++.+...+....+.+|++++|.|.+.+.| .+.+.|+++ +.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 999999999999998654 2235567776543 23345567778899999999999999877 359999995 22
Q ss_pred ecc-----------------ccCceEEeee-----ceEEEeecccCCCceEEEEEEc
Q psy11143 178 EFV-----------------EDRNHKIHRT-----GSLRLYNIGPQDSGLYRCTASN 212 (940)
Q Consensus 178 ~i~-----------------~~~~~~~~~~-----~sL~I~~v~~~DsG~YtC~a~N 212 (940)
.+. ...++....+ .+|.|.+++.+|+|.|+|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 220 1223444332 4699999999999999999985
No 271
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.67 E-value=8.7e-16 Score=160.85 Aligned_cols=176 Identities=17% Similarity=0.257 Sum_probs=124.1
Q ss_pred CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCC--eec------------cccCceEEe---eeceEEEeecccC
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE--AEF------------VEDRNHKIH---RTGSLRLYNIGPQ 201 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g--~~i------------~~~~~~~~~---~~~sL~I~~v~~~ 201 (940)
+.+...|....+.+|++++|.|.+.+.|.+.+.|++.+ ... ....++... .+.+|.|.+++.+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 34555677789999999999999999988999999832 111 112344333 2447999999999
Q ss_pred CCceEEEEEEcCCcc-eeeeeeeeec--CCCCeeeeCCCeeEEecCCeEEEEEEEeee-C-CCeEEEEECCeecCCCC--
Q psy11143 202 DSGLYRCTASNLLGE-DVAEGYLTVT--GAPPIFIQRPVSTTYSTGSTSRITCLVEGH-P-LPQMTWFHDGNSLDSDD-- 274 (940)
Q Consensus 202 DsG~YtC~a~N~~g~-~s~s~~L~V~--~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P-~p~ItW~k~g~~l~~~~-- 274 (940)
|+|.|+|.+.+..+. ......+.|. ..+|.+...+....+..|+.++|.|.+.+. | .+.|+|+++|..+....
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~ 184 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE 184 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceee
Confidence 999999999887653 2223345553 245555554554455578999999999984 4 57999999999887531
Q ss_pred --ceEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEE
Q psy11143 275 --HVTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAM 314 (940)
Q Consensus 275 --~~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~ 314 (940)
......++ ..|.|.....+|+|.|+|.|.|..........
T Consensus 185 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 185 SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEE
T ss_pred cccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeee
Confidence 00111111 24889999999999999999999876544433
No 272
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=7.6e-16 Score=167.28 Aligned_cols=178 Identities=19% Similarity=0.321 Sum_probs=127.1
Q ss_pred eCCCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eecC-----------------CCCceEEeec----CeEEEEe
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD-----------------SDDHVTYEHD----GFVLVLN 288 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l~-----------------~~~~~~~~~~----g~sL~I~ 288 (940)
..|....+.+|++++|.|.+.+.| .+.+.|+|++ ..+. ...++.+..+ ..+|.|.
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 345677889999999999998875 6799999963 1110 1235555432 2469999
Q ss_pred eeccCCCeEEEEEEEeCCCC---c--eeEEEEEEeec-------------cCCeEEEcCCceeecCCCeEEEEEeecCcC
Q psy11143 289 GVRESDAGVYNCVAQNSEGS---A--ESVAMIRINGH-------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEP 350 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~Gs---~--~~s~~l~V~~~-------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P 350 (940)
+++.+|+|.|+|.+.|..|. . ...+.|.|... .+|.+...|....+.+|++++|.|.+.+.|
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 190 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV 190 (282)
T ss_dssp SCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC
T ss_pred cCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC
Confidence 99999999999999998762 1 12345666542 234566667778899999999999999999
Q ss_pred CCeEEEEe--CCeeec------------cCCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeE-EEEEEEEEecC
Q psy11143 351 LPRISWSK--DEAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVTGE 412 (940)
Q Consensus 351 ~p~i~W~k--~g~~i~------------~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~-~~s~~L~V~~~ 412 (940)
+.+.|+| ++..+. ...++.+.. ..+|+|.++..+|+|.|+|.|.|..+.. ...+.|.|.+.
T Consensus 191 -~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 269 (282)
T 1qok_A 191 -SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKRA 269 (282)
T ss_dssp -SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred -ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEecc
Confidence 9999999 554331 134555432 3479999999999999999999864322 23456777654
No 273
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.67 E-value=1.5e-15 Score=162.14 Aligned_cols=168 Identities=18% Similarity=0.292 Sum_probs=117.9
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--E---ee-------------cCCCCeEEEee----ceEEE
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--N---SL-------------DSDDHVTYEHD----GFVLV 102 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~---~I-------------~~~~~~~~~~~----gs~L~ 102 (940)
..+.+|..+.+.+|++|+|.|.+.+. +.+.|.|+|.. . .+ ....++.+..+ ...|.
T Consensus 10 v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 89 (257)
T 3gkz_A 10 VQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQ 89 (257)
T ss_dssp EEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEE
Confidence 34455667789999999999999884 47799999832 1 11 01234444422 23589
Q ss_pred EcccccCCCeEEEEEEEeCCCc--e--EEEEEEEEecc------------cCCeeEecCCceeecCCCcEEEEEEeCCCC
Q psy11143 103 LNGVRESDAGVYNCVAQNSEGS--A--ESVAMIRINGH------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEP 166 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g~--~--~~~~~L~V~~~------------~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P 166 (940)
|.+++.+|+|.|+|.+.|..+. . ...+.|.|... +.+.+...+....+.+|++++|.|.+.+.+
T Consensus 90 I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 169 (257)
T 3gkz_A 90 LKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSV 169 (257)
T ss_dssp ECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCC
T ss_pred ECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCc
Confidence 9999999999999999987322 1 12456777654 235666677778999999999999999988
Q ss_pred CC-eEEEeeC--Ceeccc------------cCceEEee---eceEEEeecccCCCceEEEEEEcCC
Q psy11143 167 LP-RISWSKD--EAEFVE------------DRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 167 ~p-~ItW~k~--g~~i~~------------~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
.+ .+.|++. +..+.. ..++.... ..+|.|.+++.+|+|.|+|.+.+..
T Consensus 170 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 170 SSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp CGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred cceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 77 9999983 322210 12333222 2359999999999999999998753
No 274
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.67 E-value=1.1e-15 Score=162.98 Aligned_cols=180 Identities=17% Similarity=0.265 Sum_probs=125.1
Q ss_pred eeCCCeeEEecCCeEEEEEEEeee--CCCeEEEEECC--ee---c-------------CCCCceEEeecC----eEEEEe
Q psy11143 233 IQRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---L-------------DSDDHVTYEHDG----FVLVLN 288 (940)
Q Consensus 233 ~~~p~~~~v~~G~~v~L~C~v~G~--P~p~ItW~k~g--~~---l-------------~~~~~~~~~~~g----~sL~I~ 288 (940)
...+....+.+|++++|.|.+.+. +.+.+.|+|.. .. + ....++.+..++ .+|.|.
T Consensus 12 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 12 LQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp EEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred EECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 334556678999999999999984 47899999832 11 1 112345544322 259999
Q ss_pred eeccCCCeEEEEEEEeCCCC----ceeEEEEEEeec------------cCCeEEEcCCceeecCCCeEEEEEeecCcCCC
Q psy11143 289 GVRESDAGVYNCVAQNSEGS----AESVAMIRINGH------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP 352 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~Gs----~~~s~~l~V~~~------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p 352 (940)
+++.+|+|.|+|.|.|..+. ......|.|... .+|.+...+....+.+|++|+|.|.+.+.|.+
T Consensus 92 ~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 171 (257)
T 3gkz_A 92 SVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSS 171 (257)
T ss_dssp SCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCG
T ss_pred CCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccc
Confidence 99999999999999997322 123345666543 24667777777889999999999999999888
Q ss_pred -eEEEEeC--Ceeec------------cCCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeEEE-EEEEEEecC
Q psy11143 353 -RISWSKD--EAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYLTVTGE 412 (940)
Q Consensus 353 -~i~W~k~--g~~i~------------~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~~L~V~~~ 412 (940)
.+.|+|. +.... ...++.+.. ..+|.|.+++.+|+|.|+|.|.|.....-. ...|.|...
T Consensus 172 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~ 250 (257)
T 3gkz_A 172 SHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRA 250 (257)
T ss_dssp GGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred eEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeC
Confidence 9999983 22111 023444433 236999999999999999999985443222 335666654
No 275
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=162.95 Aligned_cols=172 Identities=15% Similarity=0.293 Sum_probs=124.8
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEee--eCCCeEEEEECC--eec-----------------CCCCceEEeec----C
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEG--HPLPQMTWFHDG--NSL-----------------DSDDHVTYEHD----G 282 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G--~P~p~ItW~k~g--~~l-----------------~~~~~~~~~~~----g 282 (940)
.++.+...+....+.+|++++|.|.+.+ .+.+.+.|+|.. ..+ ....++.+..+ .
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 3455667788889999999999999988 367799999742 111 01235555422 2
Q ss_pred eEEEEeeeccCCCeEEEEEEEeC------------CCCceeEEEEEEeecc-------------CCeEEEcCCceeecCC
Q psy11143 283 FVLVLNGVRESDAGVYNCVAQNS------------EGSAESVAMIRINGHR-------------APRLVVKPFDMRAPAG 337 (940)
Q Consensus 283 ~sL~I~~v~~~DsG~YtC~A~N~------------~Gs~~~s~~l~V~~~~-------------~P~i~~~p~~~~v~~G 337 (940)
.+|.|.+++.+|+|.|.|.+.|. .+.......|.|.... +|.+...|....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 35999999999999999999987 2223334556665421 4567777888899999
Q ss_pred CeEEEEEeecCcCC-CeEEEEeC--Ceeec------------cCCcEEEeee---ceEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 338 SSVEIPCKPDGEPL-PRISWSKD--EAEFV------------EDRNHKIHRT---GSLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 338 ~~vtL~C~v~g~P~-p~i~W~k~--g~~i~------------~~~~~~i~~~---~sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
++|+|.|.+.+.|. +.+.|+|. +.... ...++.+... .+|.|.+++.+|+|.|+|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999999887 89999983 22111 2245554433 3599999999999999999999654
No 276
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.67 E-value=6.6e-16 Score=164.55 Aligned_cols=180 Identities=15% Similarity=0.234 Sum_probs=125.5
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEee-----------------cCCCCeEEEee----ceEEE
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSL-----------------DSDDHVTYEHD----GFVLV 102 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~I-----------------~~~~~~~~~~~----gs~L~ 102 (940)
+..+|..+.+.+|++|+|.|.+.+.+ .+.|.|+|. +..+ ....++.+..+ ...|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 34567788899999999999998854 679999982 2111 01134444422 23489
Q ss_pred EcccccCCCeEEEEEEEeCCCceE-EEEEEEEecc-------------cCCeeEecCCceeecCCCcEEEEEEeCCCCCC
Q psy11143 103 LNGVRESDAGVYNCVAQNSEGSAE-SVAMIRINGH-------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP 168 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g~~~-~~~~L~V~~~-------------~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p 168 (940)
|.+++.+|+|.|+|.+.|..+... ..+.|.|... ..+.+...+....+.+|++++|.|.+.+.+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc
Confidence 999999999999999998665543 2556666642 24567777778899999999999999998876
Q ss_pred ----eEEEeeC--Ceecc------------ccCceEEee---eceEEEeecccCCCceEEEEEEcCCcce-eeeeeeeec
Q psy11143 169 ----RISWSKD--EAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVT 226 (940)
Q Consensus 169 ----~ItW~k~--g~~i~------------~~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~ 226 (940)
.+.|+++ +..+. ...++.... ..+|.|.+++.+|+|.|+|.+.|..+.. ..-+.|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 8999984 22211 012333222 2359999999999999999999865432 233455565
Q ss_pred C
Q psy11143 227 G 227 (940)
Q Consensus 227 ~ 227 (940)
.
T Consensus 244 ~ 244 (253)
T 3uzq_A 244 R 244 (253)
T ss_dssp C
T ss_pred C
Confidence 3
No 277
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.67 E-value=3.2e-16 Score=160.37 Aligned_cols=164 Identities=16% Similarity=0.323 Sum_probs=115.9
Q ss_pred ceeecCCCcEEEEEEeCC----CCCCeEEEeeCCeeccc------------cCceEE--eeeceEEEeecccCCCceEEE
Q psy11143 147 DMRAPAGSSVEIPCKPDG----EPLPRISWSKDEAEFVE------------DRNHKI--HRTGSLRLYNIGPQDSGLYRC 208 (940)
Q Consensus 147 ~~~v~~Ge~vtL~C~v~g----~P~p~ItW~k~g~~i~~------------~~~~~~--~~~~sL~I~~v~~~DsG~YtC 208 (940)
.+.+.+|++++|.|.+.+ .|.+.+.|++++..+.. ..+..+ ..+.+|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 457889999999999863 46679999998876621 112222 124579999999999999999
Q ss_pred EEEcCCcce-----eeeeeeeecCCC--CeeeeCCCeeEEecCCeEEEEEEEe-eeCCCeEEEEECCeecCCCCceEEe-
Q psy11143 209 TASNLLGED-----VAEGYLTVTGAP--PIFIQRPVSTTYSTGSTSRITCLVE-GHPLPQMTWFHDGNSLDSDDHVTYE- 279 (940)
Q Consensus 209 ~a~N~~g~~-----s~s~~L~V~~~~--p~~~~~p~~~~v~~G~~v~L~C~v~-G~P~p~ItW~k~g~~l~~~~~~~~~- 279 (940)
.+.|..|.. ...+.|.|...+ |.+.. .....|+.+.|.|.+. |+|.|.|+|+++|..+.........
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISD----FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE----EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEe----ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 999977653 345666666432 22221 1124588999999995 9999999999999988754332222
Q ss_pred ecCeEE---EEeeeccCCCeEEEEEEEeCCCCceeEEE
Q psy11143 280 HDGFVL---VLNGVRESDAGVYNCVAQNSEGSAESVAM 314 (940)
Q Consensus 280 ~~g~sL---~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~ 314 (940)
.++..+ .+..+...|.|.|+|.|.|..|..+..+.
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 222212 33456678999999999999998766543
No 278
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.66 E-value=1.4e-15 Score=162.23 Aligned_cols=178 Identities=17% Similarity=0.271 Sum_probs=123.0
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---e--------------cCCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L--------------DSDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I--------------~~~~~~~~~~~----gs~L~I~~ 105 (940)
++..+.+.+|++|+|.|.+.+.+ .+.|.|||.. .. + ....++.+..+ ...|.|.+
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRS 87 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECC
Confidence 34556799999999999998866 6799999832 11 1 01234444422 23489999
Q ss_pred cccCCCeEEEEEEEeCC----CceEEEEEEEEecc--------------cCCeeEecCCceeecCCCcEEEEEEeCCCCC
Q psy11143 106 VRESDAGVYNCVAQNSE----GSAESVAMIRINGH--------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL 167 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~----g~~~~~~~L~V~~~--------------~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~ 167 (940)
++.+|+|.|+|.+.+.. +.....+.|.|... ..|.+...+....+.+|++++|.|.+.+.|.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 167 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIG 167 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCT
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCC
Confidence 99999999999999872 22223456777642 2456777777889999999999999999888
Q ss_pred CeEEEeeC--Ceecc------------ccCceEEeee---ceEEEeecccCCCceEEEEEEcCCcce-eeeeeeeecCC
Q psy11143 168 PRISWSKD--EAEFV------------EDRNHKIHRT---GSLRLYNIGPQDSGLYRCTASNLLGED-VAEGYLTVTGA 228 (940)
Q Consensus 168 p~ItW~k~--g~~i~------------~~~~~~~~~~---~sL~I~~v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~~ 228 (940)
+.+.|++. +..+. ...++..... .+|.|.+++.+|+|.|+|.+.+..... ...+.|.|...
T Consensus 168 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 168 SNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp TCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred cEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 89999984 22221 1133333222 359999999999999999999854332 23455666643
No 279
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.66 E-value=7.9e-16 Score=159.43 Aligned_cols=167 Identities=19% Similarity=0.246 Sum_probs=115.9
Q ss_pred CCceeecCCCcEEEEEEeC-CCC-CCeEEEeeCC--eecc------------ccCceEEeee---ceEEEeecccCCCce
Q psy11143 145 PFDMRAPAGSSVEIPCKPD-GEP-LPRISWSKDE--AEFV------------EDRNHKIHRT---GSLRLYNIGPQDSGL 205 (940)
Q Consensus 145 p~~~~v~~Ge~vtL~C~v~-g~P-~p~ItW~k~g--~~i~------------~~~~~~~~~~---~sL~I~~v~~~DsG~ 205 (940)
|....+.+|++++|.|.+. +.+ .+.+.|++++ ..+. ...++..... .+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 6678899999999999954 443 5799999943 2210 1234444322 379999999999999
Q ss_pred EEEEEEcCCc--ceeeeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEee-eCCC-eEEEEECCeecCCCCce--E
Q psy11143 206 YRCTASNLLG--EDVAEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEG-HPLP-QMTWFHDGNSLDSDDHV--T 277 (940)
Q Consensus 206 YtC~a~N~~g--~~s~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G-~P~p-~ItW~k~g~~l~~~~~~--~ 277 (940)
|+|.+.|..+ .......|.|.. .+|.+...+.......|+.++|.|.+.| .|.+ .|+|+|+|..+...... .
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 9999999876 222334566643 3455554333333346899999999998 4554 89999999988654111 1
Q ss_pred --EeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCcee
Q psy11143 278 --YEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 278 --~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~ 311 (940)
...++ ..|.|..+..+|+|.|+|.|.|.......
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 11122 25899999999999999999998766543
No 280
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.66 E-value=6.3e-17 Score=169.67 Aligned_cols=172 Identities=16% Similarity=0.290 Sum_probs=102.1
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCE--ee---c---------CCCCeEEE--eeceEEEEccccc
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGN--SL---D---------SDDHVTYE--HDGFVLVLNGVRE 108 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~--~I---~---------~~~~~~~~--~~gs~L~I~~v~~ 108 (940)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++. .+ . ...++... .....|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 4555666888899999999999999988878899998532 11 0 01122222 2233689999999
Q ss_pred CCCeEEEEEEEeCCCceEE-EEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCeecccc--
Q psy11143 109 SDAGVYNCVAQNSEGSAES-VAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVED-- 182 (940)
Q Consensus 109 ~DsG~YtC~a~n~~g~~~~-~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~i~~~-- 182 (940)
+|+|.|+|.+.|..+.... ...|.|.... +|.+...+....+.+|++++|.|.+.+. |.+ .++|+++|..+...
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 182 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 182 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCce
Confidence 9999999999987653322 2345555432 4666665544445579999999999984 444 79999998876543
Q ss_pred --------CceEEeeeceEEEeecccCCCceEEEEEEcCCcc
Q psy11143 183 --------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 183 --------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
........+.|.|..+..+|+|.|+|.|.|....
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 183 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 1111223346899999999999999999996544
No 281
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.66 E-value=1.6e-14 Score=178.12 Aligned_cols=336 Identities=15% Similarity=0.183 Sum_probs=209.7
Q ss_pred CCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCC-CeEEEEEEEeCCCceEEEEEEEEecc--
Q psy11143 60 GSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESD-AGVYNCVAQNSEGSAESVAMIRINGH-- 136 (940)
Q Consensus 60 Gesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~D-sG~YtC~a~n~~g~~~~~~~L~V~~~-- 136 (940)
+..+.|.|.+.|.|.|.+.|.|+|..+..... ..+.|..+...+ .+.|+|.+.+..|..... .+.+...
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~-------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~~ 162 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWNR-------AELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHPC 162 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCEE-------EEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSCC
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCceeE-------EEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeeccc
Confidence 45899999999999999999999987643211 123555442333 478888777777765442 2223221
Q ss_pred -cCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEE-Ee--eCCeeccccCceEE---eeeceEEEeecccCCCceEEEE
Q psy11143 137 -RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRIS-WS--KDEAEFVEDRNHKI---HRTGSLRLYNIGPQDSGLYRCT 209 (940)
Q Consensus 137 -~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~It-W~--k~g~~i~~~~~~~~---~~~~sL~I~~v~~~DsG~YtC~ 209 (940)
.+|.+. .+.+..+.+|++++|.|.+.|.|.|.+. |+ +++..+.......+ ...++|.|.++...|.|.|+|.
T Consensus 163 ~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~ 241 (731)
T 2v5y_A 163 TRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCM 241 (731)
T ss_dssp SSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEE
T ss_pred ccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEE
Confidence 335555 6678899999999999999999999988 77 57766643321111 1236899999999999999999
Q ss_pred EEcCCcc-eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeee----CCC--eEEEEECCeecCCCCceEEeecC
Q psy11143 210 ASNLLGE-DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGH----PLP--QMTWFHDGNSLDSDDHVTYEHDG 282 (940)
Q Consensus 210 a~N~~g~-~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~----P~p--~ItW~k~g~~l~~~~~~~~~~~g 282 (940)
|.|..|. .+..+.|.|. .+|.....+... ......+.|.|..... |.. .|.|...+... ........
T Consensus 242 A~n~~G~~~s~~~~l~V~-~~P~~~~~p~~~-~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~----~~~~~~~~ 315 (731)
T 2v5y_A 242 IRTEGGVGISNYAELVVK-EPPVPIAPPQLA-SVGATYLWIQLNANSINGDGPIVAREVEYCTASGSW----NDRQPVDS 315 (731)
T ss_dssp EEETTEEEECCCEEEEEE-CCCCBSSCCEEE-EECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSC----EEEEECCS
T ss_pred EECCCCCcceeeEEEEEe-cCCCCCCCccee-ccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCc----eEEeccCc
Confidence 9999998 6777778887 444433333332 3345678898876432 222 56676543211 11112234
Q ss_pred eEEEEeeeccCCCeEEEEEEE--eCCCCceeEEEEEEee--ccCCeEEEcCCce--eecCCCeEEEEEeecCc-----CC
Q psy11143 283 FVLVLNGVRESDAGVYNCVAQ--NSEGSAESVAMIRING--HRAPRLVVKPFDM--RAPAGSSVEIPCKPDGE-----PL 351 (940)
Q Consensus 283 ~sL~I~~v~~~DsG~YtC~A~--N~~Gs~~~s~~l~V~~--~~~P~i~~~p~~~--~v~~G~~vtL~C~v~g~-----P~ 351 (940)
..+.|.++...+...|+|.|. |..|....+..+.+.. ..||. .|.++ .......+.|.+..... +.
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~---~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~ 392 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMR---GPRKLEVVEVKSRQITIRWEPFGYNVTRCHS 392 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSC---CCEEEEEEEECSSCEEEEEECCCHHHHCSSS
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCC---CCceeEEEeccCCeEEEEEECCCccccccee
Confidence 569999999999899999999 9998876443333322 11111 11121 22344567787775321 11
Q ss_pred C--eEEEEeCCeeeccCCcE-EE---eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 352 P--RISWSKDEAEFVEDRNH-KI---HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 352 p--~i~W~k~g~~i~~~~~~-~i---~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
- .|.|...+......... .+ .....+.|.++.......|++.|.|..|... +..+.+.....
T Consensus 393 ~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~ 460 (731)
T 2v5y_A 393 YNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDED 460 (731)
T ss_dssp CEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCC
T ss_pred eeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCC
Confidence 1 34454322100000000 00 1123688899988888889999999999864 55666665443
No 282
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=1.2e-15 Score=161.71 Aligned_cols=171 Identities=16% Similarity=0.267 Sum_probs=120.1
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec------------CCCCceEEeec--CeEEEEeeeccCCC
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL------------DSDDHVTYEHD--GFVLVLNGVRESDA 295 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l------------~~~~~~~~~~~--g~sL~I~~v~~~Ds 295 (940)
+...|....+.+|++++|.|.+.+.|.+.+.|+|+. ..+ ....++.+... ..+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 445577788999999999999999999999999953 111 01335554432 23699999999999
Q ss_pred eEEEEEEEeCCCCc-eeEEEEEEeecc-----------CCeEEEcCCceeecCCCeEEEEEeecCcC--CCeEEEEeC--
Q psy11143 296 GVYNCVAQNSEGSA-ESVAMIRINGHR-----------APRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKD-- 359 (940)
Q Consensus 296 G~YtC~A~N~~Gs~-~~s~~l~V~~~~-----------~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p~i~W~k~-- 359 (940)
|.|+|.+.|..+.. .....|.|.... ++..+..+....+.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~ 163 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFP 163 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCC
Confidence 99999999985432 123456665321 12233444445689999999999999886 479999984
Q ss_pred Ceeec----------------cCCcEEEee-----eceEEEecCCCCCCeEEEEEEEeC--CeeEE
Q psy11143 360 EAEFV----------------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL--LGEDV 402 (940)
Q Consensus 360 g~~i~----------------~~~~~~i~~-----~~sL~I~~v~~~D~G~YtC~A~N~--~G~~~ 402 (940)
+..+. ...++.+.. ..+|.|.+++.+|+|.|+|.|.|. +|..+
T Consensus 164 ~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~gt 229 (242)
T 2znx_A 164 GNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQGT 229 (242)
T ss_dssp TSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCCE
T ss_pred CCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCCe
Confidence 22210 134565543 238999999999999999999983 44433
No 283
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.66 E-value=3.3e-16 Score=161.72 Aligned_cols=167 Identities=17% Similarity=0.281 Sum_probs=119.5
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEEC--CeecC----------------CCCceEEeec----CeEEEEeeec
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD----------------SDDHVTYEHD----GFVLVLNGVR 291 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~--g~~l~----------------~~~~~~~~~~----g~sL~I~~v~ 291 (940)
|....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.+..+ ..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4556788999999999999875 479999985 22210 1345555432 1369999999
Q ss_pred cCCCeEEEEEEEeCCCCceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeecc--
Q psy11143 292 ESDAGVYNCVAQNSEGSAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVE-- 365 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~~-- 365 (940)
.+|+|.|+|.+.|.. .......+.|.. ..+|.+...+....+..|+.++|.|.+.|. |.| .|.|++++..+..
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 999999999999864 222234566653 245766655544567889999999999987 888 9999999875321
Q ss_pred CCcE----EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEE
Q psy11143 366 DRNH----KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 404 (940)
Q Consensus 366 ~~~~----~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s 404 (940)
.... .....+.|.|..+..+| |.|+|.|.|..|.....
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 1111 11234579999988877 99999999999976544
No 284
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.66 E-value=2.4e-15 Score=160.50 Aligned_cols=172 Identities=15% Similarity=0.288 Sum_probs=122.7
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--Ee---e--------------cCCCCeEEEee----c
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---L--------------DSDDHVTYEHD----G 98 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~~---I--------------~~~~~~~~~~~----g 98 (940)
.++.+...+..+++.+|++|+|.|.+.+. +.+.|.|+|.. .. + ....++.+..+ .
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 35677788889999999999999999883 66799999732 11 0 01124444422 2
Q ss_pred eEEEEcccccCCCeEEEEEEEeC------------CCceEEEEEEEEeccc-------------CCeeEecCCceeecCC
Q psy11143 99 FVLVLNGVRESDAGVYNCVAQNS------------EGSAESVAMIRINGHR-------------APRLVVKPFDMRAPAG 153 (940)
Q Consensus 99 s~L~I~~v~~~DsG~YtC~a~n~------------~g~~~~~~~L~V~~~~-------------~P~~~~~p~~~~v~~G 153 (940)
..|.|.+++.+|+|.|.|.+.+. .+.....+.|.|.... ++.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 35899999999999999999986 2222224566665531 3466777888899999
Q ss_pred CcEEEEEEeCCCCC-CeEEEeeC--Ceecc------------ccCceEEee---eceEEEeecccCCCceEEEEEEcCCc
Q psy11143 154 SSVEIPCKPDGEPL-PRISWSKD--EAEFV------------EDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 154 e~vtL~C~v~g~P~-p~ItW~k~--g~~i~------------~~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
++++|.|.+.+.+. +.+.|++. +..+. ...++.... ..+|.|.+++.+|+|.|+|.+.|...
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999998776 89999982 22221 123333332 23599999999999999999988543
No 285
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=9.8e-16 Score=162.32 Aligned_cols=167 Identities=16% Similarity=0.252 Sum_probs=117.3
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--E---eec---------CCCCeEEEee--ceEEEEcccccCC
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--N---SLD---------SDDHVTYEHD--GFVLVLNGVRESD 110 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~---~I~---------~~~~~~~~~~--gs~L~I~~v~~~D 110 (940)
.+...|..+.+.+|++|+|.|.+.+.|.+.|.|+|+. . .+. ...++.+... ...|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4566678889999999999999999888999999853 1 110 1234444322 3468999999999
Q ss_pred CeEEEEEEEeCCCceE-EEEEEEEecccC-----------CeeEecCCceeecCCCcEEEEEEeCCCC--CCeEEEeeC-
Q psy11143 111 AGVYNCVAQNSEGSAE-SVAMIRINGHRA-----------PRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKD- 175 (940)
Q Consensus 111 sG~YtC~a~n~~g~~~-~~~~L~V~~~~~-----------P~~~~~p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~- 175 (940)
+|.|+|.+.|..+... ..+.|.|...+. +.....+....+.+|++++|.|.+.+.| .+.+.|+++
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 9999999998754322 234566654321 2233444456799999999999999876 478999984
Q ss_pred -Ceecc----------------ccCceEEee-----eceEEEeecccCCCceEEEEEEcC
Q psy11143 176 -EAEFV----------------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 176 -g~~i~----------------~~~~~~~~~-----~~sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
+..+. ...++.+.. ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 22221 123344432 237999999999999999999873
No 286
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.66 E-value=6.6e-16 Score=159.41 Aligned_cols=168 Identities=17% Similarity=0.294 Sum_probs=118.1
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEEC--CEeec----------------CCCCeEEEee----ceEEEEccc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNSLD----------------SDDHVTYEHD----GFVLVLNGV 106 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kd--g~~I~----------------~~~~~~~~~~----gs~L~I~~v 106 (940)
+|..+.+.+|++++|.|.+.+.| .+.|.|+|+ +.... ...++.+..+ ...|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 35667899999999999999865 479999985 22210 1234554432 236899999
Q ss_pred ccCCCeEEEEEEEeCCCceEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCeecccc
Q psy11143 107 RESDAGVYNCVAQNSEGSAESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVED 182 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~i~~~ 182 (940)
+.+|+|.|+|.+.|.. .......|.|... ..|.+...+....+.+|+.++|.|.+.+. |.| .++|++++..+...
T Consensus 86 ~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~ 164 (210)
T 3d9a_H 86 TTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 164 (210)
T ss_dssp CGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceE
Confidence 9999999999998863 1112345666532 34566555544567899999999999986 888 99999988754211
Q ss_pred --Cc----eEEeeeceEEEeecccCCCceEEEEEEcCCcceeee
Q psy11143 183 --RN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 220 (940)
Q Consensus 183 --~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s 220 (940)
.. ......+.|.|.++..+| |.|+|.|.|..+.....
T Consensus 165 ~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 165 TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp ECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred EcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 11 112234569999988867 99999999988876543
No 287
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.66 E-value=9.9e-16 Score=163.72 Aligned_cols=170 Identities=19% Similarity=0.334 Sum_probs=121.2
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Ee---e----------cCCCCeEEE----eeceEEEEccc
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NS---L----------DSDDHVTYE----HDGFVLVLNGV 106 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~---I----------~~~~~~~~~----~~gs~L~I~~v 106 (940)
..+...|..+.+.+|++|+|.|.+.+.|.+.|.|+|.. .. + ....++.+. .....|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 34566678889999999999999999999999999832 11 1 112233332 22345899999
Q ss_pred ccCCCeEEEEEEEeCCCceE----EEEEEEEec------------------ccCCeeEecCCceeecCCCcEEEEEEeCC
Q psy11143 107 RESDAGVYNCVAQNSEGSAE----SVAMIRING------------------HRAPRLVVKPFDMRAPAGSSVEIPCKPDG 164 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g~~~----~~~~L~V~~------------------~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g 164 (940)
+.+|+|.|+|.+.+..+... ..+.|.|.. ...|.+...+....+.+|++++|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 99999999999998765321 135566664 23466777788888899999999999987
Q ss_pred CCCCeEEEeeCC--eecc---------------ccCceEEe----eeceEEEeecccCCCceEEEEEEcCCcc
Q psy11143 165 EPLPRISWSKDE--AEFV---------------EDRNHKIH----RTGSLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 165 ~P~p~ItW~k~g--~~i~---------------~~~~~~~~----~~~sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
. .+.+.|++.. ..+. ...++... ...+|.|.+++.+|+|.|+|.|.|..|.
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 6 6799999832 1110 01122221 1236999999999999999999987665
No 288
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.8e-15 Score=164.24 Aligned_cols=178 Identities=19% Similarity=0.304 Sum_probs=125.3
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Eeec-----------------CCCCeEEEee----ceEEE
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD-----------------SDDHVTYEHD----GFVLV 102 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~I~-----------------~~~~~~~~~~----gs~L~ 102 (940)
+...|..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+. ...++.+..+ ...|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34567788999999999999998875 5799999964 1110 1234444431 25689
Q ss_pred EcccccCCCeEEEEEEEeCCC---ceE--EEEEEEEeccc-------------CCeeEecCCceeecCCCcEEEEEEeCC
Q psy11143 103 LNGVRESDAGVYNCVAQNSEG---SAE--SVAMIRINGHR-------------APRLVVKPFDMRAPAGSSVEIPCKPDG 164 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g---~~~--~~~~L~V~~~~-------------~P~~~~~p~~~~v~~Ge~vtL~C~v~g 164 (940)
|.+++.+|+|.|+|.+.|..| ... ..+.|.|...+ .+.+...+....+.+|++++|.|.+.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 188 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASS 188 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecC
Confidence 999999999999999999876 111 23467776542 344556677788999999999999999
Q ss_pred CCCCeEEEee--CCeecc------------ccCceEEe---eeceEEEeecccCCCceEEEEEEcCCcc-eeeeeeeeec
Q psy11143 165 EPLPRISWSK--DEAEFV------------EDRNHKIH---RTGSLRLYNIGPQDSGLYRCTASNLLGE-DVAEGYLTVT 226 (940)
Q Consensus 165 ~P~p~ItW~k--~g~~i~------------~~~~~~~~---~~~sL~I~~v~~~DsG~YtC~a~N~~g~-~s~s~~L~V~ 226 (940)
.| +.+.|+| ++..+. ...++... ...+|.|.+++.+|+|.|+|.+.+.... -...+.|.|.
T Consensus 189 ~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 189 SV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp CC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 88 8999999 555431 12334332 2346999999999999999999875332 2233455555
No 289
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.65 E-value=9.6e-16 Score=164.93 Aligned_cols=197 Identities=19% Similarity=0.269 Sum_probs=114.5
Q ss_pred cccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeC--Ceecc---
Q psy11143 106 VRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKD--EAEFV--- 180 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~--g~~i~--- 180 (940)
....|.+.|.|.+.+..|....... ..+...+..+.+.+|++++|.|.+.+ +.+.+.|+|. +....
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~--------~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~ 73 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGG--------MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLI 73 (270)
T ss_dssp ---------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccc--------eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEE
Confidence 3578999999999988775544332 23445566788999999999999876 6789999982 21110
Q ss_pred ---------cc---C-ceEEee----eceEEEeecccCCCceEEEEEEcCCc----ceeeeeeeeecCC-----CCeee-
Q psy11143 181 ---------ED---R-NHKIHR----TGSLRLYNIGPQDSGLYRCTASNLLG----EDVAEGYLTVTGA-----PPIFI- 233 (940)
Q Consensus 181 ---------~~---~-~~~~~~----~~sL~I~~v~~~DsG~YtC~a~N~~g----~~s~s~~L~V~~~-----~p~~~- 233 (940)
.. . ++.... +.+|.|.+++.+|+|.|+|.+.+... .......|.|... +|.+.
T Consensus 74 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~ 153 (270)
T 3qib_D 74 NFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAV 153 (270)
T ss_dssp EEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEE
T ss_pred EECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEE
Confidence 00 0 333322 34799999999999999999986422 2223345666531 34333
Q ss_pred eCCCeeEEecCCeEEEEEEEee-eCCC-eEEEEECCeecCCCCceEE--------eecC-----eEEEEeeeccCC-CeE
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEG-HPLP-QMTWFHDGNSLDSDDHVTY--------EHDG-----FVLVLNGVRESD-AGV 297 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G-~P~p-~ItW~k~g~~l~~~~~~~~--------~~~g-----~sL~I~~v~~~D-sG~ 297 (940)
..+....+..|+.++|.|.+.| .|.+ .++|+++|..+........ ..++ ..|.|.....+| .|.
T Consensus 154 ~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~ 233 (270)
T 3qib_D 154 FEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNH 233 (270)
T ss_dssp EECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCE
T ss_pred ECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCe
Confidence 2333344556999999999998 6767 8999999998865322110 0111 236777777777 999
Q ss_pred EEEEEEeCCCCcee
Q psy11143 298 YNCVAQNSEGSAES 311 (940)
Q Consensus 298 YtC~A~N~~Gs~~~ 311 (940)
|+|.|.|.......
T Consensus 234 YtC~v~~~~l~~~~ 247 (270)
T 3qib_D 234 FRCQVQFYGLSEND 247 (270)
T ss_dssp EEEEEEECCBCTTS
T ss_pred EEEEEEecCCCCcc
Confidence 99999998665543
No 290
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.65 E-value=5.2e-16 Score=160.48 Aligned_cols=166 Identities=16% Similarity=0.232 Sum_probs=115.4
Q ss_pred eeCCCeeE-EecCCeEEEEEEEeeeC---C-CeEEEEECCeecCCCCc--------eEEeecCeEEEEeeeccCCCeEEE
Q psy11143 233 IQRPVSTT-YSTGSTSRITCLVEGHP---L-PQMTWFHDGNSLDSDDH--------VTYEHDGFVLVLNGVRESDAGVYN 299 (940)
Q Consensus 233 ~~~p~~~~-v~~G~~v~L~C~v~G~P---~-p~ItW~k~g~~l~~~~~--------~~~~~~g~sL~I~~v~~~DsG~Yt 299 (940)
...|.... +.+|++++|.|.+.|.| . +.|.|+|++..+..... ..+.. ...|.|.+++.+|+|.|+
T Consensus 6 ~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~-~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 6 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRS-VSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEE-EEEEECCHHHHHTTCCEE
T ss_pred EeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEE-EEEEEEehhHcCCCCEEE
Confidence 33444444 78999999999999985 2 49999999987653210 01111 134999999999999999
Q ss_pred EEEEeCCCCceeEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeeccCC--cEEEee
Q psy11143 300 CVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVEDR--NHKIHR 373 (940)
Q Consensus 300 C~A~N~~Gs~~~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~~~~--~~~i~~ 373 (940)
|.|.|..+.......+.+ ....+|.+...+.......|+.++|.|.+.|. |.+ .|+|+|+|..+.... ......
T Consensus 85 C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 164 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDT 164 (207)
T ss_dssp EEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECT
T ss_pred EEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECC
Confidence 999999886533333332 44568887766554334469999999999985 553 999999998774321 111222
Q ss_pred ec------eEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 374 TG------SLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 374 ~~------sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
++ .|.|.....+|.|.|+|.|.|...
T Consensus 165 ~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 165 DGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp TSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 23 356666666789999999999754
No 291
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.65 E-value=5.9e-16 Score=155.60 Aligned_cols=152 Identities=10% Similarity=0.120 Sum_probs=111.4
Q ss_pred eeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCC------------CCceEEeecCeEEEEeeeccCCCeEEEEEEEeC
Q psy11143 238 STTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS------------DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 305 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~------------~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~ 305 (940)
...+..|++|+|.|.+.+ |.+.|.|+|++..+.. ..+..+...+.+|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456789999999999854 8889999998864421 123344323345999999999999999999998
Q ss_pred CCCceeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCC
Q psy11143 306 EGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGP 384 (940)
Q Consensus 306 ~Gs~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~ 384 (940)
.| ...+.|.|... ..|.+..... ..+|.|.+.+.|.|.|+|++++..+..... ..|.+. ..
T Consensus 83 ~~--~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~------~~l~~~--~~ 144 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLRSLRQ------KTMSYQ--WT 144 (171)
T ss_dssp CS--CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEEEESS------SEEEEE--CS
T ss_pred CC--cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECcCCcc------eEEEEe--cc
Confidence 87 56667777643 2344443222 137999999999999999999988753322 233343 36
Q ss_pred CCCeEEEEEEEeCCeeEEEEEEEE
Q psy11143 385 QDSGLYRCTASNLLGEDVAEGYLT 408 (940)
Q Consensus 385 ~D~G~YtC~A~N~~G~~~~s~~L~ 408 (940)
.|.|.|+|.|.|..|..+..+.|.
T Consensus 145 ~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 145 NLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp CCSSCEEEEEEETTEEEEEEECCC
T ss_pred CCCceEEEEEEcccCcccceeEEe
Confidence 789999999999999988776553
No 292
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.65 E-value=7.4e-16 Score=161.80 Aligned_cols=179 Identities=15% Similarity=0.231 Sum_probs=120.8
Q ss_pred CCCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eec------C-----------CCCceEEeec----CeEEEEee
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL------D-----------SDDHVTYEHD----GFVLVLNG 289 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l------~-----------~~~~~~~~~~----g~sL~I~~ 289 (940)
.+....+.+|++++|.|.+.+.+ .+.|.|+|+. ..+ . ...++.+..+ ..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 35567889999999999999876 6799999863 211 0 1245555432 34699999
Q ss_pred eccCCCeEEEEEEEeCCCCc-eeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeec
Q psy11143 290 VRESDAGVYNCVAQNSEGSA-ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFV 364 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs~-~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~ 364 (940)
++.+|+|.|.|.+.|..+.. .....|.|.. ..+|.+...+....+..|+.++|.|.+.|. |.| .|.|++++..+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 165 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSG 165 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCC
Confidence 99999999999999863211 1234666653 235666544333456789999999999986 877 999999987542
Q ss_pred c--CCcE----EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 365 E--DRNH----KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 365 ~--~~~~----~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
. .... .....+.|.|..+..+| |.|+|.|.|..+.......+.+.++|.
T Consensus 166 ~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~ 220 (227)
T 1mju_H 166 VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTI 220 (227)
T ss_dssp EEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC--
T ss_pred cEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCC
Confidence 1 1111 11234579999998888 999999999888777777776666543
No 293
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.65 E-value=5.5e-16 Score=166.80 Aligned_cols=195 Identities=17% Similarity=0.241 Sum_probs=114.8
Q ss_pred cccCCCceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--Ceec-----
Q psy11143 198 IGPQDSGLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSL----- 270 (940)
Q Consensus 198 v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l----- 270 (940)
.++.|.+.|.|.+.+..|.......+.| ...+....+.+|++++|.|.+.+ +.+.|.|+|. +...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v-------~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKV-------IQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp -------------------------CCC-------EEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeE-------EeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEE
Confidence 3578899999999988776554443333 34466778899999999999865 7789999982 2111
Q ss_pred -------CCC---C-ceEEee---cCeEEEEeeeccCCCeEEEEEEEeCCC----CceeEEEEEEee----ccCCeEEE-
Q psy11143 271 -------DSD---D-HVTYEH---DGFVLVLNGVRESDAGVYNCVAQNSEG----SAESVAMIRING----HRAPRLVV- 327 (940)
Q Consensus 271 -------~~~---~-~~~~~~---~g~sL~I~~v~~~DsG~YtC~A~N~~G----s~~~s~~l~V~~----~~~P~i~~- 327 (940)
... . ++.+.. ...+|.|.+++.+|+|.|+|.+.+... .......+.|.. ..+|.+..
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 000 0 333332 134699999999999999999997432 122234566643 12565543
Q ss_pred cCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCeeeccCCcE--------------EEeeeceEEEecCCCCC-CeEE
Q psy11143 328 KPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDRNH--------------KIHRTGSLRLYNIGPQD-SGLY 390 (940)
Q Consensus 328 ~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~i~~~~~~--------------~i~~~~sL~I~~v~~~D-~G~Y 390 (940)
.+....+..|+.++|.|.+.| .|.| .|.|+|+|..+...... .....+.|.|.....+| .|.|
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~Y 234 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 234 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEE
T ss_pred CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeE
Confidence 344445566999999999998 6767 89999999888543211 11123467888887777 9999
Q ss_pred EEEEEeCCee
Q psy11143 391 RCTASNLLGE 400 (940)
Q Consensus 391 tC~A~N~~G~ 400 (940)
+|.|.|....
T Consensus 235 tC~v~~~~l~ 244 (270)
T 3qib_D 235 RCQVQFYGLS 244 (270)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEecCCC
Confidence 9999997553
No 294
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.65 E-value=4e-16 Score=162.79 Aligned_cols=171 Identities=15% Similarity=0.233 Sum_probs=116.4
Q ss_pred CCeeeeCCCeeE--EecCCeEEEEEEEeee---CC-CeEEEEECCeecCCCCce--------EEeecCeEEEEeeeccCC
Q psy11143 229 PPIFIQRPVSTT--YSTGSTSRITCLVEGH---PL-PQMTWFHDGNSLDSDDHV--------TYEHDGFVLVLNGVRESD 294 (940)
Q Consensus 229 ~p~~~~~p~~~~--v~~G~~v~L~C~v~G~---P~-p~ItW~k~g~~l~~~~~~--------~~~~~g~sL~I~~v~~~D 294 (940)
+|.+...+.... +.+|++++|.|.+.|. |. +.|+|+|++..+...... .+.. ...|.|.+++.+|
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~-~~~L~I~~~~~~D 87 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRV-VSTLPIQHQDWMS 87 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEE-EEEEECCHHHHHT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEE-EEEEEEcHHHcCC
Confidence 344443344433 7899999999999987 44 799999999877543211 1111 1349999999999
Q ss_pred CeEEEEEEEeCCCCceeEEEEE--EeeccCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCeeeccCC--c
Q psy11143 295 AGVYNCVAQNSEGSAESVAMIR--INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDR--N 368 (940)
Q Consensus 295 sG~YtC~A~N~~Gs~~~s~~l~--V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~i~~~~--~ 368 (940)
+|.|+|.|.|..+.......+. +....+|.+...+.......|+.++|.|.+.| .|.+ .|+|+|+|..+.... .
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecc
Confidence 9999999999977652222332 23456788776554433346999999999998 6776 999999998774321 1
Q ss_pred EEEeeec------eEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 369 HKIHRTG------SLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 369 ~~i~~~~------sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
.....++ .|.|.....+|.|.|+|.|.|....
T Consensus 168 ~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 168 PVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 1112233 3455555555699999999997653
No 295
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.65 E-value=2.6e-15 Score=155.59 Aligned_cols=180 Identities=22% Similarity=0.319 Sum_probs=132.5
Q ss_pred CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCC--CceEEee--cCeEEEEeeeccCCCeEEEEEEE
Q psy11143 228 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD--DHVTYEH--DGFVLVLNGVRESDAGVYNCVAQ 303 (940)
Q Consensus 228 ~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~--~~~~~~~--~g~sL~I~~v~~~DsG~YtC~A~ 303 (940)
.+|.+ ..+....+..|+.+.|.|.+.|.|.|.|.|+|+|..+... .++.+.. ...+|.|.++..+|+|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 34555 4667788999999999999999999999999999999765 3444443 24569999999999999999999
Q ss_pred eCCCCceeEEEEEEeecc-CCeEEEcCCceeecCCCeEEEEEeec----CcCCC--eEEEEeCCeeeccCCcEEEee---
Q psy11143 304 NSEGSAESVAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPD----GEPLP--RISWSKDEAEFVEDRNHKIHR--- 373 (940)
Q Consensus 304 N~~Gs~~~s~~l~V~~~~-~P~i~~~p~~~~v~~G~~vtL~C~v~----g~P~p--~i~W~k~g~~i~~~~~~~i~~--- 373 (940)
|..|.....+.+.|.... +|.... ....+..+.|.|... +.|.. .+.|.+++..........+..
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~~~-----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~ 171 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSIDQ-----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 171 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEEEE-----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHH
T ss_pred ECCCceEEEEEEEECCCCCCCcceE-----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccc
Confidence 999999888877775422 222211 123467789999733 33444 478888775422111111111
Q ss_pred eceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 374 TGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 374 ~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
..+|.|.++...+.|.|+|.|.|..|....+..+.|+.++
T Consensus 172 ~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp HTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred cccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 2689999999999999999999999988887777777654
No 296
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.64 E-value=2.3e-15 Score=159.50 Aligned_cols=166 Identities=19% Similarity=0.319 Sum_probs=117.9
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeC-----CCeEEEEECC--eec---C---------CCCceEEeecC--eEEEEeee
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHP-----LPQMTWFHDG--NSL---D---------SDDHVTYEHDG--FVLVLNGV 290 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P-----~p~ItW~k~g--~~l---~---------~~~~~~~~~~g--~sL~I~~v 290 (940)
+...|....+.+|++++|.|.+.+.| .+.+.|+|+. ..+ . ...++.+...+ .+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 34556778899999999999999887 6899999852 211 0 12345444322 35999999
Q ss_pred ccCCCeEEEEEEEeCCCCc-eeEEEEEEeecc-----------CCeEEEcCCceeecCCCeEEEEEeecCcC--CCeEEE
Q psy11143 291 RESDAGVYNCVAQNSEGSA-ESVAMIRINGHR-----------APRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISW 356 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs~-~~s~~l~V~~~~-----------~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p~i~W 356 (940)
+.+|+|.|+|.+.|..+.. ...+.|.|.... ++.....+....+.+|++|+|.|.+.+.| .+.+.|
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEE
Confidence 9999999999999986542 223456665422 23334444455699999999999999885 569999
Q ss_pred EeCC--eee------c-----------cCCcEEEee-----eceEEEecCCCCCCeEEEEEEEeC
Q psy11143 357 SKDE--AEF------V-----------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 357 ~k~g--~~i------~-----------~~~~~~i~~-----~~sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
+|++ ... . ...++.+.. ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 164 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 164 VKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 9963 211 0 134555543 248999999999999999999995
No 297
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.64 E-value=1.2e-15 Score=162.31 Aligned_cols=171 Identities=18% Similarity=0.307 Sum_probs=120.4
Q ss_pred CeeEecCCceeecCCCcEEEEEEeCCCC-----CCeEEEeeCC--eec------------cccCceEEeeec---eEEEe
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPDGEP-----LPRISWSKDE--AEF------------VEDRNHKIHRTG---SLRLY 196 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~g~P-----~p~ItW~k~g--~~i------------~~~~~~~~~~~~---sL~I~ 196 (940)
+.+...|..+.+.+|++++|.|.+.+.| .+.|.|++++ ..+ ....++.....+ +|.|.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 3455557788899999999999999887 6899999954 111 012344443332 79999
Q ss_pred ecccCCCceEEEEEEcCCcce-eeeeeeeecC--CCCeeeeCCCeeEEecCCeEEEEEEEeee-CCC-eEEEEECCeecC
Q psy11143 197 NIGPQDSGLYRCTASNLLGED-VAEGYLTVTG--APPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP-QMTWFHDGNSLD 271 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g~~-s~s~~L~V~~--~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p-~ItW~k~g~~l~ 271 (940)
+++.+|+|.|+|.+.|..+.. .....|.|.. .+|.+...+....+..|+.++|.|.+.|. |.+ .|+|+|+|..+.
T Consensus 115 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 194 (252)
T 3bkj_L 115 RVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 194 (252)
T ss_dssp SCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecC
Confidence 999999999999999875532 2234566653 34555554443334579999999999985 544 799999999876
Q ss_pred CCCc----eEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 272 SDDH----VTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 272 ~~~~----~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
.... .....++ ..|.|..+..+|+|.|+|.|.|.....
T Consensus 195 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 195 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp SSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 5411 1111122 248999999999999999999987654
No 298
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.64 E-value=3.4e-15 Score=158.10 Aligned_cols=167 Identities=19% Similarity=0.317 Sum_probs=116.8
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccC-----CCeEEEEECC--Ee---ec---------CCCCeEEEee--ceEEEEcc
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHP-----LPQMTWFHDG--NS---LD---------SDDHVTYEHD--GFVLVLNG 105 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P-----~p~V~W~kdg--~~---I~---------~~~~~~~~~~--gs~L~I~~ 105 (940)
.+...|..+.+.+|++|+|.|.+.+.| .+.|.|+|+. .. +. ...++..... ...|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 345567888999999999999999887 6899999842 21 10 1234444322 24689999
Q ss_pred cccCCCeEEEEEEEeCCCceE-EEEEEEEeccc-----------CCeeEecCCceeecCCCcEEEEEEeCCCC--CCeEE
Q psy11143 106 VRESDAGVYNCVAQNSEGSAE-SVAMIRINGHR-----------APRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRIS 171 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g~~~-~~~~L~V~~~~-----------~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P--~p~It 171 (940)
++.+|+|.|+|.+.|..+... ..+.|.|...+ ++.....+....+.+|++++|.|.+.+.+ .+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 999999999999998755422 24567776532 22234444556799999999999999874 56899
Q ss_pred EeeCC--eecc-----------------ccCceEEee-----eceEEEeecccCCCceEEEEEEcC
Q psy11143 172 WSKDE--AEFV-----------------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 172 W~k~g--~~i~-----------------~~~~~~~~~-----~~sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
|++++ ..+. ...++.... ..+|.|.+++.+|+|.|+|.+.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99953 2110 023444432 247999999999999999999984
No 299
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.64 E-value=4.7e-16 Score=162.30 Aligned_cols=172 Identities=15% Similarity=0.235 Sum_probs=116.6
Q ss_pred CCCeEEeCCCcEE--EecCCeEEEEEEeecc---CC-CeEEEEECCEeecCCCCe--------EEEeeceEEEEcccccC
Q psy11143 44 APPIFIQRPVSTT--YSTGSTSRITCLVEGH---PL-PQMTWFHDGNSLDSDDHV--------TYEHDGFVLVLNGVRES 109 (940)
Q Consensus 44 ~pP~~~~~p~~~~--V~eGesv~L~C~v~g~---P~-p~V~W~kdg~~I~~~~~~--------~~~~~gs~L~I~~v~~~ 109 (940)
.+|.+...|.... +.+|+.++|.|.+.|. |. +.|+|+|++..+...... ++. ....|.|.+++.+
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIR-VVSTLPIQHQDWM 86 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEE-EEEEEECCHHHHH
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEE-EEEEEEEcHHHcC
Confidence 3566655555544 7899999999999986 33 799999999887532111 111 1235899999999
Q ss_pred CCeEEEEEEEeCCCceEEEEEEE--EecccCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCeeccccCc-
Q psy11143 110 DAGVYNCVAQNSEGSAESVAMIR--INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDRN- 184 (940)
Q Consensus 110 DsG~YtC~a~n~~g~~~~~~~L~--V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~~i~~~~~- 184 (940)
|+|.|+|.|.|..+.......+. +....+|.+.+.+......+|+.++|.|.+.| .|.+ .|+|+++|..+.....
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 166 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDT 166 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceec
Confidence 99999999999877542222222 13334566665554444446999999999998 6765 9999999987743211
Q ss_pred -eEEeeec------eEEEeecccCCCceEEEEEEcCCcc
Q psy11143 185 -HKIHRTG------SLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 185 -~~~~~~~------sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
.....++ .|.|.....+|.|.|+|.|.|....
T Consensus 167 ~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 167 APVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred ccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 1112222 3555555555799999999997654
No 300
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.64 E-value=3.6e-15 Score=158.81 Aligned_cols=163 Identities=17% Similarity=0.340 Sum_probs=114.7
Q ss_pred CCCeeEEecCCeEEEEEEEeee--CCCeEEEEECC--eecC------------CCCceEEeecC--eEEEEeeeccCCCe
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NSLD------------SDDHVTYEHDG--FVLVLNGVRESDAG 296 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~--P~p~ItW~k~g--~~l~------------~~~~~~~~~~g--~sL~I~~v~~~DsG 296 (940)
.+....+.+|++++|.|.+.+. |.+.+.|+|+. .... ...++.....+ .+|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 3456788999999999999887 78899999852 1110 12344443332 35999999999999
Q ss_pred EEEEEEEeCCCCc---eeEEEEEEeecc-------------------CCeEEEcCCceeecCCCeEEEEEeecCcC--CC
Q psy11143 297 VYNCVAQNSEGSA---ESVAMIRINGHR-------------------APRLVVKPFDMRAPAGSSVEIPCKPDGEP--LP 352 (940)
Q Consensus 297 ~YtC~A~N~~Gs~---~~s~~l~V~~~~-------------------~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p 352 (940)
.|+|.+.|..+.. .....|.|.... ++.+.. +....+.+|++++|.|.+.+.| .+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~ 166 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTFSSY 166 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-CCCeEEcCCCeEEEEEEEeCCccccc
Confidence 9999999976532 233456665422 113333 3445689999999999999877 68
Q ss_pred eEEEEeC--Ceee------c-----------cCCcEEEeeec-----eEEEecCCCCCCeEEEEEEEeCC
Q psy11143 353 RISWSKD--EAEF------V-----------EDRNHKIHRTG-----SLRLYNIGPQDSGLYRCTASNLL 398 (940)
Q Consensus 353 ~i~W~k~--g~~i------~-----------~~~~~~i~~~~-----sL~I~~v~~~D~G~YtC~A~N~~ 398 (940)
.+.|+|+ +..+ . ...++.+..++ +|.|.+++.+|+|.|+|.|.|..
T Consensus 167 ~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 167 AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9999986 3211 1 12356555432 59999999999999999999963
No 301
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.64 E-value=2.1e-16 Score=165.64 Aligned_cols=169 Identities=17% Similarity=0.300 Sum_probs=101.0
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec------------CCCCceEEee--cCeEEEEeeeccCC
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL------------DSDDHVTYEH--DGFVLVLNGVRESD 294 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l------------~~~~~~~~~~--~g~sL~I~~v~~~D 294 (940)
.+...|....+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ....++.... ...+|.|.+++.+|
T Consensus 25 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 104 (233)
T 3bqu_C 25 TVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSED 104 (233)
T ss_dssp CEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCC
T ss_pred eEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHH
Confidence 3444567778899999999999999988899999853 211 0112332221 22359999999999
Q ss_pred CeEEEEEEEeCCCCce-eEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeeccC-Cc-
Q psy11143 295 AGVYNCVAQNSEGSAE-SVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVED-RN- 368 (940)
Q Consensus 295 sG~YtC~A~N~~Gs~~-~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~~~-~~- 368 (940)
+|.|+|.+.|..+... ....+.|... .+|.+...+......+|+.++|.|.+.|. |.+ .|+|+|+|..+..+ ..
T Consensus 105 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 184 (233)
T 3bqu_C 105 VADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 184 (233)
T ss_dssp CSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEE
T ss_pred CEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEe
Confidence 9999999998765332 2234555432 36777765544444579999999999985 444 79999999876543 11
Q ss_pred --------EEEeeeceEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 369 --------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 369 --------~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
......+.|.|..+..+|+|.|+|.|.|...
T Consensus 185 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 185 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred cCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 0112234689999999999999999999744
No 302
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.64 E-value=4.4e-16 Score=161.98 Aligned_cols=171 Identities=18% Similarity=0.320 Sum_probs=121.7
Q ss_pred CCceeecCCCcEEEEEEeCC-CCCC----eEEEeeCCeeccc-------------cCceEEee--------eceEEEeec
Q psy11143 145 PFDMRAPAGSSVEIPCKPDG-EPLP----RISWSKDEAEFVE-------------DRNHKIHR--------TGSLRLYNI 198 (940)
Q Consensus 145 p~~~~v~~Ge~vtL~C~v~g-~P~p----~ItW~k~g~~i~~-------------~~~~~~~~--------~~sL~I~~v 198 (940)
+..+.+.+|++++|.|.+.+ .+.+ .+.|++++..... ..+..+.. +.+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 45667889999999999954 4444 4999998642210 23333332 557999999
Q ss_pred ccCCCceEEEEEEcCC-cceeeeeeeeecCCCCeeeeCCCeeEEecCCeE-EEEEEEe-eeCCCeEEEEECCeecCCCCc
Q psy11143 199 GPQDSGLYRCTASNLL-GEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTS-RITCLVE-GHPLPQMTWFHDGNSLDSDDH 275 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~-g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v-~L~C~v~-G~P~p~ItW~k~g~~l~~~~~ 275 (940)
+.+|+|.|+|.+.+.. +..+..+.|.|.. +|.+...+.... ..|+.+ .|.|.+. |+|.|.|+|++++........
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~-~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLA-KPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCC-CCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEE-CCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccce
Confidence 9999999999999876 7777888888884 555554333222 678888 5999987 899999999997544332211
Q ss_pred eEEeec-----CeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEE
Q psy11143 276 VTYEHD-----GFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 276 ~~~~~~-----g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V 317 (940)
.....+ ...|.|..+..+|.|.|+|.|.|..+.......+.+
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECC
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEE
Confidence 111111 135999999999999999999999987766555444
No 303
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.64 E-value=1.2e-15 Score=161.49 Aligned_cols=169 Identities=16% Similarity=0.239 Sum_probs=120.6
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEE----------------CCeecCCC---CceEEee---cCeEEEEee
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH----------------DGNSLDSD---DHVTYEH---DGFVLVLNG 289 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k----------------~g~~l~~~---~~~~~~~---~g~sL~I~~ 289 (940)
+...+....+.+|++++|.|.+.+.+.+.|.|+| ++...... .++.+.. ...+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4455677889999999999999999999999999 33322222 3444432 123699999
Q ss_pred eccCCCeEEEEEEEeCCCC----ceeEEEEEEee----ccCCeEE-EcCCceeecCCCeEEEEEeecCcCCC--eEEEEe
Q psy11143 290 VRESDAGVYNCVAQNSEGS----AESVAMIRING----HRAPRLV-VKPFDMRAPAGSSVEIPCKPDGEPLP--RISWSK 358 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs----~~~s~~l~V~~----~~~P~i~-~~p~~~~v~~G~~vtL~C~v~g~P~p--~i~W~k 358 (940)
++.+|+|.|+|.+.|..+. ......+.|.. ..+|.+. ..+....+.+|+.++|.|.+.|.|++ .|+|+|
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 163 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 163 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE
Confidence 9999999999999976541 12334566653 2356554 34445556779999999999997765 899999
Q ss_pred CCeeeccCCcEE--------------EeeeceEEEecCCCCC-CeEEEEEEEeCCee
Q psy11143 359 DEAEFVEDRNHK--------------IHRTGSLRLYNIGPQD-SGLYRCTASNLLGE 400 (940)
Q Consensus 359 ~g~~i~~~~~~~--------------i~~~~sL~I~~v~~~D-~G~YtC~A~N~~G~ 400 (940)
+|..+....... ....+.|.|.....+| .|.|+|.|.|....
T Consensus 164 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 164 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 998876432111 1122358888888888 99999999997654
No 304
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.64 E-value=8.5e-16 Score=158.87 Aligned_cols=167 Identities=16% Similarity=0.237 Sum_probs=114.9
Q ss_pred EeCCCcEE-EecCCeEEEEEEeeccC----CCeEEEEECCEeecCCC--------CeEEEeeceEEEEcccccCCCeEEE
Q psy11143 49 IQRPVSTT-YSTGSTSRITCLVEGHP----LPQMTWFHDGNSLDSDD--------HVTYEHDGFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 49 ~~~p~~~~-V~eGesv~L~C~v~g~P----~p~V~W~kdg~~I~~~~--------~~~~~~~gs~L~I~~v~~~DsG~Yt 115 (940)
+..|.... +.+|++++|.|.+.|.| .+.|.|+|++..+.... ..++. ....|.|.+++.+|+|.|+
T Consensus 6 ~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 6 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFR-SVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEE-EEEEEECCHHHHHTTCCEE
T ss_pred EeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEE-EEEEEEEehhHcCCCCEEE
Confidence 44455444 88999999999999874 24999999998775321 01111 1235799999999999999
Q ss_pred EEEEeCCCceEEEEEEEE--ecccCCeeEecCCceeecCCCcEEEEEEeCC-CCC-CeEEEeeCCeeccccCc--eEEee
Q psy11143 116 CVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPL-PRISWSKDEAEFVEDRN--HKIHR 189 (940)
Q Consensus 116 C~a~n~~g~~~~~~~L~V--~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~-p~ItW~k~g~~i~~~~~--~~~~~ 189 (940)
|.|.|..+.......+.+ ....+|.+.+.+......+|+.++|.|.+.| .|. +.|+|+++|..+..... .....
T Consensus 85 C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 164 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDT 164 (207)
T ss_dssp EEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECT
T ss_pred EEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECC
Confidence 999998886433333332 3344577666554444456999999999998 455 38999999987753221 11122
Q ss_pred ec------eEEEeecccCCCceEEEEEEcCCcc
Q psy11143 190 TG------SLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 190 ~~------sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
++ .|.|.....+|.|.|+|.|.|....
T Consensus 165 ~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 165 DGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp TSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred CCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 22 3566666667899999999997543
No 305
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.64 E-value=3e-15 Score=157.18 Aligned_cols=177 Identities=14% Similarity=0.222 Sum_probs=118.6
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---e---c-----------CCCCeEEEe----eceEEEE
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L---D-----------SDDHVTYEH----DGFVLVL 103 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I---~-----------~~~~~~~~~----~gs~L~I 103 (940)
..+|..+.+.+|++|+|.|.+.+.+ .+.|.|||++ .. + . ...++.+.. ....|.|
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (227)
T 1mju_H 4 LQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQL 83 (227)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEE
Confidence 3456778899999999999999876 6799999863 21 1 1 023444442 2356899
Q ss_pred cccccCCCeEEEEEEEeCCCceE-EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCee
Q psy11143 104 NGVRESDAGVYNCVAQNSEGSAE-SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAE 178 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~~~-~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~ 178 (940)
.+++.+|+|.|.|.+.+..+... ..+.|.|... ..|.+........+.+|+.++|.|.+.|. |.+ .|+|++++..
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 163 (227)
T 1mju_H 84 SSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLS 163 (227)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCc
Confidence 99999999999999998632211 2346777642 23555544333456789999999999984 776 9999998876
Q ss_pred ccc--cCc----eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 179 FVE--DRN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 179 i~~--~~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
+.. ... ......+.|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 164 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 164 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp TTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 421 111 112234579999988878 99999999987776666666655
No 306
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=2.5e-16 Score=164.99 Aligned_cols=169 Identities=16% Similarity=0.238 Sum_probs=117.9
Q ss_pred CCeeEEecCCeEEEEEEEeeeCC-C-eEEEEECC--eec------------CCCCceEEeec--CeEEEEeeeccCCCeE
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHPL-P-QMTWFHDG--NSL------------DSDDHVTYEHD--GFVLVLNGVRESDAGV 297 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P~-p-~ItW~k~g--~~l------------~~~~~~~~~~~--g~sL~I~~v~~~DsG~ 297 (940)
|....+.+|++++|.|.+.+.+. + .|.|+|++ ..+ ....++..... ..+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 56677889999999999988643 4 79999863 221 11234444332 2369999999999999
Q ss_pred EEEEEEeCCCC---ceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCcCCC--eEEEEeCCeeeccCCcE-
Q psy11143 298 YNCVAQNSEGS---AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP--RISWSKDEAEFVEDRNH- 369 (940)
Q Consensus 298 YtC~A~N~~Gs---~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p--~i~W~k~g~~i~~~~~~- 369 (940)
|+|.|.|..+. ......+.|.. ..+|.+...+.......|+.++|.|.+.|.+++ .|+|+|+|..+..+...
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 99999999873 11233444522 245666554443344568899999999986443 99999999887543111
Q ss_pred --------EEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEE
Q psy11143 370 --------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAE 404 (940)
Q Consensus 370 --------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s 404 (940)
.....+.|.|..+..+|.|.|+|.|.|..+....+
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 00122468899999999999999999998764443
No 307
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.64 E-value=3.5e-15 Score=155.10 Aligned_cols=170 Identities=16% Similarity=0.261 Sum_probs=120.2
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---e---cC-------------CCCeEEEee----ceEEEE
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L---DS-------------DDHVTYEHD----GFVLVL 103 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I---~~-------------~~~~~~~~~----gs~L~I 103 (940)
+|..+.+.+|++++|.|.+.+.+ .+.|.|+|++ .. + .. ..++.+..+ ...|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 35667899999999999998866 6799999853 11 1 00 234444422 236899
Q ss_pred cccccCCCeEEEEEEEeCCCce-E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCC
Q psy11143 104 NGVRESDAGVYNCVAQNSEGSA-E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDE 176 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~~-~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g 176 (940)
.+++.+|+|.|+|.+.+..+.. . ..+.|.|... ..|.+...+....+.+|+.++|.|.+.|. |.| .|+|++++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGA 165 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCC
Confidence 9999999999999999876432 1 2456666542 34565555544457889999999999986 888 99999987
Q ss_pred eecc--ccCc----eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeee
Q psy11143 177 AEFV--EDRN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 221 (940)
Q Consensus 177 ~~i~--~~~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~ 221 (940)
.... .... ......+.|.|.++..++ |.|+|.|.|..+.....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 166 LSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 6310 0000 122335679999988866 999999999988755543
No 308
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.64 E-value=2.8e-15 Score=152.46 Aligned_cols=155 Identities=13% Similarity=0.239 Sum_probs=115.2
Q ss_pred CCcEEEecCCeEEEEEEee--ccCCCeEEEEE--CCEee----------cCCCCeEEEeeceEEEEcccccCCCeEEEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVE--GHPLPQMTWFH--DGNSL----------DSDDHVTYEHDGFVLVLNGVRESDAGVYNCV 117 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~--g~P~p~V~W~k--dg~~I----------~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~ 117 (940)
+..+...+|++|+|.|... +.+.+.|.|+| ++..| ....+..+..++ .|.|.+++.+|+|.|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng-sL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG-TLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS-CEEECSCCGGGCEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC-CEEECCCChhhCEEEEEE
Confidence 3456788999999999542 34567999999 88876 344566666666 569999999999999999
Q ss_pred EEeCCCceEE--EEEEEEeccc-CCeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEE
Q psy11143 118 AQNSEGSAES--VAMIRINGHR-APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLR 194 (940)
Q Consensus 118 a~n~~g~~~~--~~~L~V~~~~-~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~ 194 (940)
+.|..|.... .+.|.|.... .|.+.. .+..++|.|.+.+.|.+.+.|++++..+ .. ....|.
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~------~~~~i~ 149 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHL-KL------SQRVIT 149 (182)
T ss_dssp EEETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEE-EE------ESSCEE
T ss_pred EEeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEEC-CC------CCcEEE
Confidence 9999887654 4556665432 233332 2347999999999999999999999877 21 122344
Q ss_pred EeecccCCCceEEEEEEcCCcceeeeeee
Q psy11143 195 LYNIGPQDSGLYRCTASNLLGEDVAEGYL 223 (940)
Q Consensus 195 I~~v~~~DsG~YtC~a~N~~g~~s~s~~L 223 (940)
+.. ..+|+|.|+|.|.|..+..+....+
T Consensus 150 ~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 150 HKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp EEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred Eec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 333 5789999999999999987776555
No 309
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.63 E-value=1.7e-15 Score=157.49 Aligned_cols=170 Identities=16% Similarity=0.261 Sum_probs=121.2
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--ee---c---C-------------CCCceEEeec----CeEEEEe
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L---D-------------SDDHVTYEHD----GFVLVLN 288 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~---l---~-------------~~~~~~~~~~----g~sL~I~ 288 (940)
+....+.+|++++|.|.+.+.+ .+.+.|+|++ .. + . ...++.+..+ ..+|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4556888999999999999876 6899999863 21 1 0 0245555432 2369999
Q ss_pred eeccCCCeEEEEEEEeCCCCc-e--eEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCe
Q psy11143 289 GVRESDAGVYNCVAQNSEGSA-E--SVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEA 361 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~Gs~-~--~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~ 361 (940)
+++.+|+|.|+|.+.|..+.. . ..+.|.|.. ..+|.+...+....+.+|+.++|.|.+.|. |.| .|+|++++.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 999999999999999976432 1 234566653 245666655544456789999999999997 999 999999886
Q ss_pred ee---ccCCc---EEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy11143 362 EF---VEDRN---HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGY 406 (940)
Q Consensus 362 ~i---~~~~~---~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~ 406 (940)
.+ ..... ......+.|.|..+..+| |.|+|.|.|..|....++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 31 00000 122235679999988866 9999999999997666543
No 310
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.63 E-value=2.8e-16 Score=164.58 Aligned_cols=168 Identities=17% Similarity=0.253 Sum_probs=116.5
Q ss_pred CCcEEEecCCeEEEEEEeeccC-CC-eEEEEECC--Eee------------cCCCCeEEEe--eceEEEEcccccCCCeE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHP-LP-QMTWFHDG--NSL------------DSDDHVTYEH--DGFVLVLNGVRESDAGV 113 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P-~p-~V~W~kdg--~~I------------~~~~~~~~~~--~gs~L~I~~v~~~DsG~ 113 (940)
|..+.+.+|++++|.|.+.+.+ .+ .|.|+|++ ..+ ....++.... ....|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 7788899999999999998754 34 79999863 211 0122343332 23468999999999999
Q ss_pred EEEEEEeCCCce---EEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC-CeEEEeeCCeeccccCce-
Q psy11143 114 YNCVAQNSEGSA---ESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFVEDRNH- 185 (940)
Q Consensus 114 YtC~a~n~~g~~---~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p~ItW~k~g~~i~~~~~~- 185 (940)
|+|.+.+..+.. ...+.|.|... .+|.+...+....+.+|+.++|.|.+.+. |. +.|+|+++|..+......
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 999999987731 11344555322 24555554444444578999999999985 44 389999999887543110
Q ss_pred --------EEeeeceEEEeecccCCCceEEEEEEcCCcceee
Q psy11143 186 --------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVA 219 (940)
Q Consensus 186 --------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~ 219 (940)
.....+.|.|.++..+|+|.|+|.|.|.......
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 1112246889999999999999999998765433
No 311
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.63 E-value=2.1e-15 Score=151.57 Aligned_cols=153 Identities=10% Similarity=0.122 Sum_probs=111.1
Q ss_pred CcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC------------CCCeEEEeeceEEEEcccccCCCeEEEEEEEe
Q psy11143 53 VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS------------DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 53 ~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~------------~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
+.+.+.+|++|+|.|.+.+ |.+.|.|+|++..+.. ..+..+......|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred cEEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 3567889999999999854 8889999999875421 11233332334579999999999999999998
Q ss_pred CCCceEEEEEEEEecccC-CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCCeeccccCceEEeeeceEEEeecc
Q psy11143 121 SEGSAESVAMIRINGHRA-PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIG 199 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~~~~-P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~ 199 (940)
..| ...+.|.|..... |.+...... ..|.|.+.+.|.|.++|++++..+...... .|.+. .
T Consensus 82 ~~~--~~~~~L~V~~~~~~p~i~~~~~~--------~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~------~l~~~--~ 143 (171)
T 1ccz_A 82 ITD--TMKFFLYVLEMVSKPMIYWECSN--------ATLTCEVLEGTDVELKLYQGKEHLRSLRQK------TMSYQ--W 143 (171)
T ss_dssp CCS--CEEEEEEEECCCCCCEEEEETTT--------TEEEEECSSCSSCEEEEEETTEEEEEESSS------EEEEE--C
T ss_pred CCC--cEEEEEEEECcCCCCEEEEecCC--------cEEEEEeCCCCCcEEEEEECCEECcCCcce------EEEEe--c
Confidence 877 5566777765422 444332211 279999999899999999999877643221 23333 3
Q ss_pred cCCCceEEEEEEcCCcceeeeeeee
Q psy11143 200 PQDSGLYRCTASNLLGEDVAEGYLT 224 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g~~s~s~~L~ 224 (940)
..|+|.|+|.|.|..+..+..+.|.
T Consensus 144 ~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 144 TNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp SCCSSCEEEEEEETTEEEEEEECCC
T ss_pred cCCCceEEEEEEcccCcccceeEEe
Confidence 6789999999999999877766554
No 312
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.63 E-value=4.2e-15 Score=157.21 Aligned_cols=171 Identities=20% Similarity=0.303 Sum_probs=120.3
Q ss_pred eeEecCCceeecCCCcEEEEEEeCCCCCCeEEEee----------------CCeecccc---CceEEee----eceEEEe
Q psy11143 140 RLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK----------------DEAEFVED---RNHKIHR----TGSLRLY 196 (940)
Q Consensus 140 ~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k----------------~g~~i~~~---~~~~~~~----~~sL~I~ 196 (940)
.+...+..+.+.+|++++|.|.+.+.+.+.|.|+| ++...... .++.+.. ..+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 34556777889999999999999999999999998 22222111 3444432 2379999
Q ss_pred ecccCCCceEEEEEEcCCc----ceeeeeeeeecC-----CCCeee-eCCCeeEEecCCeEEEEEEEeeeCCC--eEEEE
Q psy11143 197 NIGPQDSGLYRCTASNLLG----EDVAEGYLTVTG-----APPIFI-QRPVSTTYSTGSTSRITCLVEGHPLP--QMTWF 264 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~g----~~s~s~~L~V~~-----~~p~~~-~~p~~~~v~~G~~v~L~C~v~G~P~p--~ItW~ 264 (940)
+++.+|+|.|+|.+.+..+ .......|.|.. .+|.+. ..+....+..|+.++|.|.+.|.|++ .++|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 9999999999999987643 122344566653 234433 34444556679999999999997665 89999
Q ss_pred ECCeecCCCCceEEe--------ecC-----eEEEEeeeccCC-CeEEEEEEEeCCCCce
Q psy11143 265 HDGNSLDSDDHVTYE--------HDG-----FVLVLNGVRESD-AGVYNCVAQNSEGSAE 310 (940)
Q Consensus 265 k~g~~l~~~~~~~~~--------~~g-----~sL~I~~v~~~D-sG~YtC~A~N~~Gs~~ 310 (940)
++|..+......... .++ ..|.|.....+| .|.|+|.|.|......
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 999988754221110 122 237888887778 9999999999876554
No 313
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.63 E-value=3.5e-16 Score=162.74 Aligned_cols=172 Identities=19% Similarity=0.297 Sum_probs=121.0
Q ss_pred CCcEEEecCCeEEEEEEeec-cCCC----eEEEEECCEeecC-------------CCCeEEEe-------eceEEEEccc
Q psy11143 52 PVSTTYSTGSTSRITCLVEG-HPLP----QMTWFHDGNSLDS-------------DDHVTYEH-------DGFVLVLNGV 106 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g-~P~p----~V~W~kdg~~I~~-------------~~~~~~~~-------~gs~L~I~~v 106 (940)
|..+.+.+|++++|.|.+.+ .+.+ .|.|+|++..... ..+..+.. ....|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 45667889999999999954 4433 4999998642211 23334333 2456899999
Q ss_pred ccCCCeEEEEEEEeCC-CceEEEEEEEEecccCCeeEecCCceeecCCCcE-EEEEEeC-CCCCCeEEEeeCCeeccccC
Q psy11143 107 RESDAGVYNCVAQNSE-GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSV-EIPCKPD-GEPLPRISWSKDEAEFVEDR 183 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~-g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~v-tL~C~v~-g~P~p~ItW~k~g~~i~~~~ 183 (940)
+.+|+|.|+|.+.+.. +.....+.|.|.. +|.+...+.... .+|+.+ .|.|.+. +.|.+.|+|++++.......
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~--~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~ 162 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLA--KPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTS 162 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCC--CCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEE--CCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccc
Confidence 9999999999999976 6666666666654 555554443333 678888 4999987 89999999998644332111
Q ss_pred c------eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 184 N------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 184 ~------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
. ......+.|.|.++..+|.|.|+|.|.|..+.......|...
T Consensus 163 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 163 QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCC
T ss_pred eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEE
Confidence 1 111223469999999999999999999988876666555544
No 314
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.63 E-value=5.4e-15 Score=157.47 Aligned_cols=165 Identities=16% Similarity=0.306 Sum_probs=114.1
Q ss_pred eCCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--Ee---e-c--------CCCCeEEEee--ceEEEEcccccCCC
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---L-D--------SDDHVTYEHD--GFVLVLNGVRESDA 111 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~~---I-~--------~~~~~~~~~~--gs~L~I~~v~~~Ds 111 (940)
..|..+.+.+|++|+|.|.+.+. |.+.|.|+|++ .. + . ...++..... ...|.|.+++.+|+
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDE 86 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhC
Confidence 34567889999999999999886 77899999842 11 1 0 1224444322 23589999999999
Q ss_pred eEEEEEEEeCCCceE---EEEEEEEecccC------------------CeeEecCCceeecCCCcEEEEEEeCCCC--CC
Q psy11143 112 GVYNCVAQNSEGSAE---SVAMIRINGHRA------------------PRLVVKPFDMRAPAGSSVEIPCKPDGEP--LP 168 (940)
Q Consensus 112 G~YtC~a~n~~g~~~---~~~~L~V~~~~~------------------P~~~~~p~~~~v~~Ge~vtL~C~v~g~P--~p 168 (940)
|.|+|.+.+..+... ..+.|.|...+. +.....+....+.+|++++|.|.+.+.+ .+
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 166 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSY 166 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCccccc
Confidence 999999998765322 245666665331 1123344456699999999999999876 77
Q ss_pred eEEEeeC--Ceecc-----------------ccCceEEeee-----ceEEEeecccCCCceEEEEEEcCC
Q psy11143 169 RISWSKD--EAEFV-----------------EDRNHKIHRT-----GSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 169 ~ItW~k~--g~~i~-----------------~~~~~~~~~~-----~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
.+.|+++ +..+. ...++.+..+ .+|.|.+++.+|+|.|+|.+.|..
T Consensus 167 ~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 167 AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9999985 32220 1124444332 249999999999999999999853
No 315
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.62 E-value=7.5e-15 Score=152.06 Aligned_cols=178 Identities=21% Similarity=0.310 Sum_probs=130.9
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC--CeEEEe--eceEEEEcccccCCCeEEEEEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTYEH--DGFVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~--~~~~~~--~gs~L~I~~v~~~DsG~YtC~a~ 119 (940)
.+|.+ ..|..+.+.+|+.+.|.|.+.|.|.+.|.|+|+|..+.... ++.+.. ....|.|.+++.+|+|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 35666 57788999999999999999999999999999999987653 344442 34668999999999999999999
Q ss_pred eCCCceEEEEEEEEecccCCeeEecCCceeecCCCcEEEEEEeC----CCCCC--eEEEeeCCeeccccCceEEe---ee
Q psy11143 120 NSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD----GEPLP--RISWSKDEAEFVEDRNHKIH---RT 190 (940)
Q Consensus 120 n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~----g~P~p--~ItW~k~g~~i~~~~~~~~~---~~ 190 (940)
|..|.....+.|.|...+.+..... ....+..+.|.|... +.|.. .+.|.+++............ ..
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~~~----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~ 172 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSIDQ----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEEEE----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHH
T ss_pred ECCCceEEEEEEEECCCCCCCcceE----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccccccc
Confidence 9999988888888876544322211 123467789999743 23333 47788776532111110000 11
Q ss_pred ceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 191 GSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 191 ~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
..|.|.++.+.+.|.|+|.|.|..|....+..+.+.
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 579999999999999999999999987776666655
No 316
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.62 E-value=4.3e-15 Score=155.51 Aligned_cols=167 Identities=14% Similarity=0.256 Sum_probs=115.9
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Eeec-----------------CCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD-----------------SDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~I~-----------------~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++|+|.|.+.+.| .+.|.|+|+. ..+. ...++.+..+ ...|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 6 ESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp EECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 35567899999999999998876 6789999853 2110 1234444432 35689999
Q ss_pred cccCCCeEEEEEEEeCCC-----ce-E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEe
Q psy11143 106 VRESDAGVYNCVAQNSEG-----SA-E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWS 173 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g-----~~-~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~ 173 (940)
++.+|+|.|.|.+.+..| .. . ..+.|.|... ..|.+...+....+.+|+.++|.|.+.+. |.+ .|+|+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 999999999999998764 21 1 2456777652 23555443323346789999999999985 776 99999
Q ss_pred eCCeeccc--c-----CceEEeeeceEEEeecccCCCceEEEEEEcCCccee
Q psy11143 174 KDEAEFVE--D-----RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 174 k~g~~i~~--~-----~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
+++..+.. . ........+.|.|.++..+| |.|+|.|.|..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 98865321 0 00112223468999998888 999999999766544
No 317
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.61 E-value=5e-15 Score=150.09 Aligned_cols=153 Identities=16% Similarity=0.244 Sum_probs=110.4
Q ss_pred CeeEEecCCeEEEEEEEee-eCCCeEEEEEC-CeecC------------CC--CceEEeecCeEEEEeeeccCCCeEEEE
Q psy11143 237 VSTTYSTGSTSRITCLVEG-HPLPQMTWFHD-GNSLD------------SD--DHVTYEHDGFVLVLNGVRESDAGVYNC 300 (940)
Q Consensus 237 ~~~~v~~G~~v~L~C~v~G-~P~p~ItW~k~-g~~l~------------~~--~~~~~~~~g~sL~I~~v~~~DsG~YtC 300 (940)
....+.+|++++|.|.+.+ .+.+.|.|+|. +..+. .. .++.+...+.+|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4567889999999999854 34679999994 32211 11 355553333459999999999999999
Q ss_pred EEEeCCCCceeEEEEEEeec-cCCeEEEcCCceeecCCCeEEEEEee-cCcCCCeEEEEeCCeeeccCCcEEEeeeceEE
Q psy11143 301 VAQNSEGSAESVAMIRINGH-RAPRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRNHKIHRTGSLR 378 (940)
Q Consensus 301 ~A~N~~Gs~~~s~~l~V~~~-~~P~i~~~p~~~~v~~G~~vtL~C~v-~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~ 378 (940)
.+.+.. .....+.|.|... ..|.+.. .+.+++|.|.+ .| |.|.|.|++++..+.. ..+.+|.
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~------~~~~~l~ 150 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLRS------LRQKTMS 150 (180)
T ss_dssp EEESSS-EEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEEE------ESSSEEE
T ss_pred EEEcCC-eEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECcC------CCCCEEE
Confidence 998876 5555666777542 2244332 23679999999 66 9999999999987751 1234566
Q ss_pred EecCCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy11143 379 LYNIGPQDSGLYRCTASNLLGEDVAEGYL 407 (940)
Q Consensus 379 I~~v~~~D~G~YtC~A~N~~G~~~~s~~L 407 (940)
+.. .+|+|.|+|.|.|..|.......+
T Consensus 151 ~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 151 YQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEE--hhcCccEEEEEecCcCccccceeE
Confidence 633 789999999999999988766543
No 318
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.61 E-value=8.1e-15 Score=157.71 Aligned_cols=169 Identities=22% Similarity=0.340 Sum_probs=118.5
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccC------CCeEEEEEC--CEe---ec---------CCCCeEEEee--ceEEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHP------LPQMTWFHD--GNS---LD---------SDDHVTYEHD--GFVLV 102 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P------~p~V~W~kd--g~~---I~---------~~~~~~~~~~--gs~L~ 102 (940)
.+.+...|..+.+.+|++|+|.|.+.+.| .+.|.|+|+ +.. +. ...++.+... ...|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 45666778889999999999999998877 679999985 221 10 1234444322 34689
Q ss_pred EcccccCCCeEEEEEEEeCCCceE-EEEEEEEeccc----------------CCe-eEecCCceeecCCCcEEEEEEeCC
Q psy11143 103 LNGVRESDAGVYNCVAQNSEGSAE-SVAMIRINGHR----------------APR-LVVKPFDMRAPAGSSVEIPCKPDG 164 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g~~~-~~~~L~V~~~~----------------~P~-~~~~p~~~~v~~Ge~vtL~C~v~g 164 (940)
|.+++.+|+|.|.|.+.+..+... ..+.|.|...+ .|. ....+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 999999999999999998754322 23567776542 122 223344457999999999999998
Q ss_pred CCC--CeEEEeeCC--ee---cc---c-----------cCceEEee-----eceEEEeecccCCCceEEEEEEcC
Q psy11143 165 EPL--PRISWSKDE--AE---FV---E-----------DRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 165 ~P~--p~ItW~k~g--~~---i~---~-----------~~~~~~~~-----~~sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
.+. +.+.|+++. .. +. . ..++.+.. ..+|.|.+++.+|+|.|+|.+.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 764 799999953 21 11 0 22333321 347999999999999999999985
No 319
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.61 E-value=3.4e-15 Score=159.62 Aligned_cols=184 Identities=18% Similarity=0.272 Sum_probs=115.9
Q ss_pred CeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--CeecC-----C--C----------CceEE----eecCeEEE
Q psy11143 230 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSLD-----S--D----------DHVTY----EHDGFVLV 286 (940)
Q Consensus 230 p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l~-----~--~----------~~~~~----~~~g~sL~ 286 (940)
|.+...+....+.+|++++|.|.+.+.|.+.+.|+|. +.... . . .+... .....+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 3455567778899999999999999999999999983 21110 0 0 01111 11233599
Q ss_pred EeeeccCCCeEEEEEEEeCCCC---ceeEEEEEEeecc---------------CCeEEEcCCceeecCCCeEEEEEeecC
Q psy11143 287 LNGVRESDAGVYNCVAQNSEGS---AESVAMIRINGHR---------------APRLVVKPFDMRAPAGSSVEIPCKPDG 348 (940)
Q Consensus 287 I~~v~~~DsG~YtC~A~N~~Gs---~~~s~~l~V~~~~---------------~P~i~~~p~~~~v~~G~~vtL~C~v~g 348 (940)
|.+++.+|+|.|.|.+.|..+. ......|.|.... +|.+...|....+.+|++|+|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 9999999999999999998762 2334556665421 456777777789999999999999987
Q ss_pred c-CCCeEEEEeCCe--e---ec---------cCCcEEEee-----eceEEEecCCCCCCeEEEEEEEeCC---eeE--EE
Q psy11143 349 E-PLPRISWSKDEA--E---FV---------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNLL---GED--VA 403 (940)
Q Consensus 349 ~-P~p~i~W~k~g~--~---i~---------~~~~~~i~~-----~~sL~I~~v~~~D~G~YtC~A~N~~---G~~--~~ 403 (940)
. |.+.+.|+|.+. . +. ...++.+.. ..+|.|.+++.+|+|.|.|.|.+.. +.. ..
T Consensus 163 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~fg~ 242 (259)
T 3omz_A 163 SWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLIFGK 242 (259)
T ss_dssp CCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCEECC
T ss_pred ccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceEECC
Confidence 5 788999998431 1 10 123555442 2369999999999999999998532 111 12
Q ss_pred EEEEEEecCC
Q psy11143 404 EGYLTVTGEN 413 (940)
Q Consensus 404 s~~L~V~~~~ 413 (940)
...|.|++.+
T Consensus 243 GT~l~v~~~~ 252 (259)
T 3omz_A 243 GTRVTVEPRS 252 (259)
T ss_dssp CEEEEEEC--
T ss_pred CCEEEEeeCc
Confidence 3457777543
No 320
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=1.3e-14 Score=151.77 Aligned_cols=168 Identities=17% Similarity=0.274 Sum_probs=119.3
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--ee---c--------------CCCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L--------------DSDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~---l--------------~~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. + ....++.+..+ ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3467788999999999998865 4789999853 21 1 01235555432 246999999
Q ss_pred ccCCCeEEEEEEEeCCC---C---ceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEe-C
Q psy11143 291 RESDAGVYNCVAQNSEG---S---AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSK-D 359 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~G---s---~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k-~ 359 (940)
+.+|+|.|.|.+.+..| . ....+.|.|.. ..+|.+...+....+.+|+.++|.|.+.|. |.| .|.|++ +
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 99999999999998753 1 11234666753 245666543322345789999999999987 877 999999 8
Q ss_pred Ceeecc---------CCcEEEeeeceEEEecCCC--CCCeEEEEEEEeCCeeEEEEE
Q psy11143 360 EAEFVE---------DRNHKIHRTGSLRLYNIGP--QDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 360 g~~i~~---------~~~~~i~~~~sL~I~~v~~--~D~G~YtC~A~N~~G~~~~s~ 405 (940)
|..+.. +..+ ...+.|.|..... +|.|.|+|.|.|..|......
T Consensus 167 g~~l~~~~~~~~~~~~~~~--~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 167 NSDISSTRGFPSVLRGGKY--AATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp SCBCSCEEECCCEEETTEE--EEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCccceeEECCccccCCeE--EEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 877643 1112 2245688887776 789999999999999876654
No 321
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.61 E-value=2.9e-15 Score=160.15 Aligned_cols=168 Identities=20% Similarity=0.305 Sum_probs=107.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEe---ecC-C-------------CCeEEE----eeceEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNS---LDS-D-------------DHVTYE----HDGFVL 101 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~---I~~-~-------------~~~~~~----~~gs~L 101 (940)
+|.+...|..+.+.+|++|+|.|.+.+.|.+.|.|+|. +.. +.. . .+.... .....|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 35566778889999999999999999988889999982 111 100 0 011111 223458
Q ss_pred EEcccccCCCeEEEEEEEeCCCc---eEEEEEEEEeccc---------------CCeeEecCCceeecCCCcEEEEEEeC
Q psy11143 102 VLNGVRESDAGVYNCVAQNSEGS---AESVAMIRINGHR---------------APRLVVKPFDMRAPAGSSVEIPCKPD 163 (940)
Q Consensus 102 ~I~~v~~~DsG~YtC~a~n~~g~---~~~~~~L~V~~~~---------------~P~~~~~p~~~~v~~Ge~vtL~C~v~ 163 (940)
.|.+++.+|+|.|+|.+.+..+. ....+.|.|.... .|.+...+....+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 99999999999999999987663 2224566666532 34566677778999999999999988
Q ss_pred CC-CCCeEEEeeCC--eecc------------ccCceEEee-----eceEEEeecccCCCceEEEEEEc
Q psy11143 164 GE-PLPRISWSKDE--AEFV------------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASN 212 (940)
Q Consensus 164 g~-P~p~ItW~k~g--~~i~------------~~~~~~~~~-----~~sL~I~~v~~~DsG~YtC~a~N 212 (940)
+. |.+.+.|++.+ ..+. ...++.+.. ...|.|.+++.+|+|.|+|.+.+
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 74 78899999843 1110 012333321 23599999999999999999985
No 322
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=1.5e-14 Score=151.21 Aligned_cols=171 Identities=17% Similarity=0.268 Sum_probs=118.1
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--E---eec--------------CCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--N---SLD--------------SDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~---~I~--------------~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++|+|.|.+.+.+ .+.|.|||.. . .+. ...++.+..+ ...|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (223)
T 1dee_B 6 ESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNS 85 (223)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECC
Confidence 34567899999999999998765 4689999853 1 110 1234444432 24689999
Q ss_pred cccCCCeEEEEEEEeCCC---ce-E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEee-
Q psy11143 106 VRESDAGVYNCVAQNSEG---SA-E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSK- 174 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g---~~-~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k- 174 (940)
++.+|+|.|.|.+.+..| .. . ..+.|.|... .+|.+...+....+.+|+.++|.|.+.+. |.+ .++|++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 165 (223)
T 1dee_B 86 LRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYK 165 (223)
T ss_dssp CCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEcc
Confidence 999999999999998753 11 1 2346777632 24555443323346789999999999985 777 999999
Q ss_pred CCeecccc---C----ceEEeeeceEEEeeccc--CCCceEEEEEEcCCcceeeee
Q psy11143 175 DEAEFVED---R----NHKIHRTGSLRLYNIGP--QDSGLYRCTASNLLGEDVAEG 221 (940)
Q Consensus 175 ~g~~i~~~---~----~~~~~~~~sL~I~~v~~--~DsG~YtC~a~N~~g~~s~s~ 221 (940)
+|..+... . ...+...+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp TSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 88776430 0 01222345688887776 789999999999888765543
No 323
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.61 E-value=8e-15 Score=148.57 Aligned_cols=154 Identities=16% Similarity=0.238 Sum_probs=109.9
Q ss_pred CCcEEEecCCeEEEEEEeec-cCCCeEEEEEC-CEeec------------CC--CCeEEEeeceEEEEcccccCCCeEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEG-HPLPQMTWFHD-GNSLD------------SD--DHVTYEHDGFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g-~P~p~V~W~kd-g~~I~------------~~--~~~~~~~~gs~L~I~~v~~~DsG~Yt 115 (940)
...+.+.+|++|+|.|.+.+ .+.+.|.|+|+ +..+. .. .+..+......|.|.+++.+|+|.|+
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYY 85 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEE
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEE
Confidence 35678999999999999854 34679999994 33221 11 34444333445799999999999999
Q ss_pred EEEEeCCCceEEEEEEEEecccC-CeeEecCCceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeeccccCceEEeeeceE
Q psy11143 116 CVAQNSEGSAESVAMIRINGHRA-PRLVVKPFDMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFVEDRNHKIHRTGSL 193 (940)
Q Consensus 116 C~a~n~~g~~~~~~~L~V~~~~~-P~~~~~p~~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~~~~~~~~~~~~sL 193 (940)
|.+.+.. .....+.|.|..... |.+.. .++.++|.|.+ .+ |.|.++|++++..+.. ..+.+|
T Consensus 86 C~v~~~~-~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~------~~~~~l 149 (180)
T 2dru_A 86 MRMLHET-EDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLRS------LRQKTM 149 (180)
T ss_dssp EEEESSS-EEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEEE------ESSSEE
T ss_pred EEEEcCC-eEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECcC------CCCCEE
Confidence 9998776 444567777765322 33322 34679999999 56 9999999999987751 123355
Q ss_pred EEeecccCCCceEEEEEEcCCcceeeeeee
Q psy11143 194 RLYNIGPQDSGLYRCTASNLLGEDVAEGYL 223 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L 223 (940)
.+.. .+|+|.|+|.|.|..+.......+
T Consensus 150 ~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 150 SYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEE--hhcCccEEEEEecCcCccccceeE
Confidence 5532 789999999999999887665544
No 324
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.61 E-value=1.5e-14 Score=157.83 Aligned_cols=179 Identities=16% Similarity=0.297 Sum_probs=124.2
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eecC-----------------CCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD-----------------SDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l~-----------------~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.| .+.+.|+|+. ..+. ...++.+..+ ..+|.|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 4567889999999999998876 5799999953 2110 1134444321 246999999
Q ss_pred ccCCCeEEEEEEEeCC-CCce----eEEEEEEeec--------------cCCeEEEcCCceeecCCCeEEEEEeecCcCC
Q psy11143 291 RESDAGVYNCVAQNSE-GSAE----SVAMIRINGH--------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL 351 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~-Gs~~----~s~~l~V~~~--------------~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~ 351 (940)
+.+|+|.|.|.+.|.. |... ..+.|.|... .++.+...|..+.+.+|++++|.|.+.+.|.
T Consensus 109 ~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 109 TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 9999999999999975 2111 2235666541 1344555666778999999999999999887
Q ss_pred C------eEEEEeCC--ee---ecc---------CCcEEEee---eceEEEecCCCCCCeEEEEEEEeCCeeEEE-EEEE
Q psy11143 352 P------RISWSKDE--AE---FVE---------DRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLLGEDVA-EGYL 407 (940)
Q Consensus 352 p------~i~W~k~g--~~---i~~---------~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~-s~~L 407 (940)
+ .+.|+|+. .. +.. ..++.+.. ..+|.|.+++.+|+|.|+|.|.|.....-. ...|
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l 268 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKL 268 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred cccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEEE
Confidence 6 99999962 21 110 34555433 237999999999999999999996543222 3467
Q ss_pred EEecCCC
Q psy11143 408 TVTGENS 414 (940)
Q Consensus 408 ~V~~~~~ 414 (940)
.|+....
T Consensus 269 ~v~~~~~ 275 (291)
T 2gki_A 269 EIKHHHH 275 (291)
T ss_dssp EEECC--
T ss_pred EEEeeEc
Confidence 7777654
No 325
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.60 E-value=1.3e-14 Score=151.37 Aligned_cols=167 Identities=16% Similarity=0.294 Sum_probs=118.0
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---ec--------------CCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---LD--------------SDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I~--------------~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++|+|.|.+.+.+ .+.|.|||.. .. +. ...++.+..+ ...|.|.+
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 6 ESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred cCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 34567899999999999998865 5789999853 11 10 1234444432 24689999
Q ss_pred cccCCCeEEEEEEEeCCCce---EEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CC--CeEEEeeCCe
Q psy11143 106 VRESDAGVYNCVAQNSEGSA---ESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL--PRISWSKDEA 177 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g~~---~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~--p~ItW~k~g~ 177 (940)
++.+|+|.|.|.+.+..+.. ...+.|.|... .+|.+...+ ...+.+|+.++|.|.+.+. |. +.|.|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~ 164 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGK 164 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCS
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCE
Confidence 99999999999999875531 12356777643 245665554 4456799999999999885 76 6999999887
Q ss_pred eccc-cCc------eEEeeeceEEEeecccCCCceEEEEEEcCCccee
Q psy11143 178 EFVE-DRN------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 178 ~i~~-~~~------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
.+.. ... ..+...+.|.|......|.|.|+|.|.|..+...
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 165 DITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 6521 000 1112233588998888999999999999877643
No 326
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.60 E-value=1e-14 Score=152.23 Aligned_cols=164 Identities=16% Similarity=0.289 Sum_probs=119.4
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--ee---c--------------CCCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L--------------DSDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~---l--------------~~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. + ....++.+..+ ..+|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3457888999999999998865 5789999853 21 1 01245555532 246999999
Q ss_pred ccCCCeEEEEEEEeCCCC---ceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CC--CeEEEEeCCee
Q psy11143 291 RESDAGVYNCVAQNSEGS---AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL--PRISWSKDEAE 362 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs---~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~--p~i~W~k~g~~ 362 (940)
+.+|+|.|.|.+.|..+. ......|.|.. ..+|.+...+ ...+..|+.++|.|.+.+. |. +.|.|++++..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 999999999999997653 12234667753 2456766655 4456789999999999987 76 69999999876
Q ss_pred ec---------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEE
Q psy11143 363 FV---------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 363 i~---------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~ 402 (940)
+. .++.+. ..+.|.|......|.|.|+|.|.|..|...
T Consensus 166 ~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYT--MSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEECCCEECSSSCEE--EEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cceEecCceECCCCCEE--EEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 42 111222 234689998888999999999999998754
No 327
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.60 E-value=1.3e-14 Score=156.14 Aligned_cols=168 Identities=22% Similarity=0.343 Sum_probs=118.7
Q ss_pred CeeeeCCCeeEEecCCeEEEEEEEeeeC------CCeEEEEEC--CeecC------------CCCceEEeec--CeEEEE
Q psy11143 230 PIFIQRPVSTTYSTGSTSRITCLVEGHP------LPQMTWFHD--GNSLD------------SDDHVTYEHD--GFVLVL 287 (940)
Q Consensus 230 p~~~~~p~~~~v~~G~~v~L~C~v~G~P------~p~ItW~k~--g~~l~------------~~~~~~~~~~--g~sL~I 287 (940)
+.+...|....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.+... ..+|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 3445567778899999999999999887 679999985 32211 1345554432 236999
Q ss_pred eeeccCCCeEEEEEEEeCCCCc-eeEEEEEEeecc----------------CCeE-EEcCCceeecCCCeEEEEEeecCc
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSA-ESVAMIRINGHR----------------APRL-VVKPFDMRAPAGSSVEIPCKPDGE 349 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~-~~s~~l~V~~~~----------------~P~i-~~~p~~~~v~~G~~vtL~C~v~g~ 349 (940)
.+++.+|+|.|.|.+.|..+.. .....|.|.... +|.+ +..+....+.+|++|+|.|.+.+.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 165 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGY 165 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESS
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCC
Confidence 9999999999999999876432 223456665421 1222 233344578999999999999988
Q ss_pred CC--CeEEEEeCC--e---eec---c-----------CCcEEEee-----eceEEEecCCCCCCeEEEEEEEeC
Q psy11143 350 PL--PRISWSKDE--A---EFV---E-----------DRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 350 P~--p~i~W~k~g--~---~i~---~-----------~~~~~i~~-----~~sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
|. +.|.|+|+. . .+. . ..++.+.. ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 166 ~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 166 SFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp CGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred ccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 75 799999863 2 121 0 23454432 348999999999999999999995
No 328
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.60 E-value=8e-15 Score=153.80 Aligned_cols=171 Identities=15% Similarity=0.257 Sum_probs=115.5
Q ss_pred CCcEEEecCCeEEEEEEeeccCC----CeEEEEECC--Eee----c------------CCCCeEEEee----ceEEEEcc
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHPL----PQMTWFHDG--NSL----D------------SDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P~----p~V~W~kdg--~~I----~------------~~~~~~~~~~----gs~L~I~~ 105 (940)
|..+.+.+|++++|.|.+.+.|. +.|.|+|+. ..+ . ...++.+..+ ...|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 55678999999999999998774 799999852 211 0 0123443321 25689999
Q ss_pred cccCCCeEEEEEEEeCCC------ce-E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEE
Q psy11143 106 VRESDAGVYNCVAQNSEG------SA-E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISW 172 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g------~~-~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW 172 (940)
++.+|+|.|.|.+.+..| .. . ..+.|.|... ..|.+...+....+.+|+.++|.|.+.+. |.+ .|+|
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 999999999999998765 11 1 2356777632 24555554444456789999999999985 777 9999
Q ss_pred eeCCeeccccCc------eEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeee
Q psy11143 173 SKDEAEFVEDRN------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYL 223 (940)
Q Consensus 173 ~k~g~~i~~~~~------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L 223 (940)
++++..+..... ......+.|.|.++..++ |.|+|.|.|..+.......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~~ 222 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKKI 222 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEEc
Confidence 998765421100 112234568999888866 99999999988876544433
No 329
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.60 E-value=5.6e-15 Score=154.97 Aligned_cols=169 Identities=16% Similarity=0.281 Sum_probs=116.4
Q ss_pred CCeeEEecCCeEEEEEEEeeeCC----CeEEEEEC--CeecC----------------CCCceEEeec----CeEEEEee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHPL----PQMTWFHD--GNSLD----------------SDDHVTYEHD----GFVLVLNG 289 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P~----p~ItW~k~--g~~l~----------------~~~~~~~~~~----g~sL~I~~ 289 (940)
|....+.+|++++|.|.+.+.|. +.+.|+|. +..+. ...++.+..+ ..+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45567889999999999998775 89999985 22210 1234554432 24699999
Q ss_pred eccCCCeEEEEEEEeCCC------C---ceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEE
Q psy11143 290 VRESDAGVYNCVAQNSEG------S---AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISW 356 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~G------s---~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W 356 (940)
++.+|+|.|.|.+.|..| . ....+.|.|.. ..+|.+...+....+.+|+.++|.|.+.|. |.| .|.|
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 999999999999999765 1 11235666653 245666654433456789999999999986 888 9999
Q ss_pred EeCCeeeccCCc------EEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 357 SKDEAEFVEDRN------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 357 ~k~g~~i~~~~~------~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
++++..+..... -.....+.|.|..+..+| |.|+|.|.|..|......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 998865311100 011234578999888866 999999999998765543
No 330
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.60 E-value=4.1e-15 Score=155.65 Aligned_cols=164 Identities=14% Similarity=0.260 Sum_probs=116.3
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eec-----------------CCCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL-----------------DSDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l-----------------~~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.| .+.+.|+|+. ..+ ....++.+..+ ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456789999999999999876 6799999853 211 01245555432 246999999
Q ss_pred ccCCCeEEEEEEEeCCC-----C---ceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEe
Q psy11143 291 RESDAGVYNCVAQNSEG-----S---AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSK 358 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~G-----s---~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k 358 (940)
+.+|+|.|.|.+.|..| . ....+.|.|.. ..+|.+...+....+..|+.++|.|.+.|. |.| .|.|++
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 166 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 166 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCT
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEec
Confidence 99999999999999865 2 11234666754 234655543322245789999999999987 777 999999
Q ss_pred CCeeec---------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEE
Q psy11143 359 DEAEFV---------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 359 ~g~~i~---------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~ 402 (940)
++..+. .++.+. ..+.|.|..+..+| |.|+|.|.|..+...
T Consensus 167 ~~~~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 167 GALTSGVHTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp TSCCTTCEECCCEECTTSCEE--EEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred CCCcCCeEecCceeCCCCCEE--EEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 986531 111221 23468999998888 999999999776543
No 331
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.59 E-value=4.4e-14 Score=146.48 Aligned_cols=160 Identities=14% Similarity=0.167 Sum_probs=115.7
Q ss_pred eeecCCCcEEEEEEeCCCCCC--eEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 148 MRAPAGSSVEIPCKPDGEPLP--RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 148 ~~v~~Ge~vtL~C~v~g~P~p--~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
+.+..|++++|.|.+ +.|.| .|.|.+.+..+ ...........|.|.+++.+|+|.|.|.+.|..+.....+.|+|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV 93 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 93 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEE
Confidence 588999999999999 88888 99999965444 11112233457999999999999999999999888888999999
Q ss_pred cCCCCeeeeCCCeeEEecCCeEEEEEEEeee-CC----CeEEEEECCeecCCCCceE--Ee---------ecC-----eE
Q psy11143 226 TGAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PL----PQMTWFHDGNSLDSDDHVT--YE---------HDG-----FV 284 (940)
Q Consensus 226 ~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~----p~ItW~k~g~~l~~~~~~~--~~---------~~g-----~s 284 (940)
...|......+. .+..|+.+ |.|.+.+. |. ++|+|+|++.+|....... +. ... .+
T Consensus 94 ~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~ 170 (210)
T 1gsm_A 94 YAFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTER 170 (210)
T ss_dssp EBCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEE
T ss_pred EecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEE
Confidence 954444443432 66778888 99999985 64 4899999999996442111 10 011 11
Q ss_pred EEEeeeccCCCeEEEEEEEeCCCCceeEE
Q psy11143 285 LVLNGVRESDAGVYNCVAQNSEGSAESVA 313 (940)
Q Consensus 285 L~I~~v~~~DsG~YtC~A~N~~Gs~~~s~ 313 (940)
|.+.....++.+.|+|+|.+..-......
T Consensus 171 ~~~~~~~~D~~~~~tC~a~~~L~~~~~~~ 199 (210)
T 1gsm_A 171 WRLPPLGTPVPPALYCQATMRLPGLELSH 199 (210)
T ss_dssp EECCCCCSSCCSEEEEEEEEEETTEEEEE
T ss_pred EeecCCcccCCceEEEEEEeeCCCCcccc
Confidence 33335566777899999999875554433
No 332
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.59 E-value=1.5e-13 Score=144.21 Aligned_cols=240 Identities=17% Similarity=0.272 Sum_probs=165.8
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeec-cC---CCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEG-HP---LPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g-~P---~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+...|+...+..|+.++|+|.+.| .| +.+|+|+|||..+... ...|.|..+...|+|.|+|.+.+..
T Consensus 4 tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa--------T~tLti~s~t~sdSG~YqCvVTDa~ 75 (304)
T 3shs_A 4 TVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN--------TATLTVADATSENAGSYKVTVQDTD 75 (304)
T ss_dssp EEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC--------SSEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC--------cceEEeeeccccCCeEEEEEEEECC
Confidence 3455577777899999999999865 56 4489999999887632 2356899999999999999999988
Q ss_pred CceEEEEEEEEecccCCeeEe-cCCceeecCCCcEEEEEEe--CC-CC-----CCeEEEeeCCeeccccCceEEeeeceE
Q psy11143 123 GSAESVAMIRINGHRAPRLVV-KPFDMRAPAGSSVEIPCKP--DG-EP-----LPRISWSKDEAEFVEDRNHKIHRTGSL 193 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~-~p~~~~v~~Ge~vtL~C~v--~g-~P-----~p~ItW~k~g~~i~~~~~~~~~~~~sL 193 (940)
|.......+.|.....+.+.+ .|....+..|..+.|.+.+ .| .| ..+++|++++..+... ..|
T Consensus 76 Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA--------q~l 147 (304)
T 3shs_A 76 TMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT--------QDI 147 (304)
T ss_dssp TCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS--------SEE
T ss_pred CCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc--------ccc
Confidence 877765556665543333333 3555667778999999988 53 44 4699999999876432 246
Q ss_pred EEeecccCCCceEEEEEEcCCcc--eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEe--------eeCCC--eE
Q psy11143 194 RLYNIGPQDSGLYRCTASNLLGE--DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVE--------GHPLP--QM 261 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~a~N~~g~--~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~--------G~P~p--~I 261 (940)
.+...+..++|.|+|.+.|..+. .+.++.+.+. .-..-........+..|+.+.|...+. |.|.- ++
T Consensus 148 T~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (304)
T 3shs_A 148 TIQEFTADKNGVYTVKVWGESEDSAASASTKIMLA-TMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKY 226 (304)
T ss_dssp EECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEEC-EEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEE
T ss_pred ceeeEEecCCeEEEEEEEcCCCCcccccceEEEEE-ccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEE
Confidence 67778889999999999998764 3444444443 111222234456778899999887653 22222 56
Q ss_pred EEEEC--CeecC---------CCCceEEeecCeEEEEeeeccCCCeEEEEEEEe
Q psy11143 262 TWFHD--GNSLD---------SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQN 304 (940)
Q Consensus 262 tW~k~--g~~l~---------~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N 304 (940)
.||.. |..-+ .-..+.+..+|. |.-....-+|...|.|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 227 NWYLQREGQLSPTLIGSEVGEALEGFSITPDGH-LFKESATYDDTAKFWCVAKL 279 (304)
T ss_dssp EEEEECTTCCSCEEEESSSEECGGGEEECTTSC-EEESSCCGGGCEEEEEEEEE
T ss_pred EEEEeecCccCchhhhhhhhhhhccceeCCCcc-eeecccccccchheeeHHHH
Confidence 68853 32111 112355666666 66667778899999999864
No 333
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.59 E-value=3.1e-13 Score=166.51 Aligned_cols=395 Identities=11% Similarity=0.129 Sum_probs=228.2
Q ss_pred cEEEECCCCCCC-CeEEEEEEEcCCceEEEE-EEEEE---eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEE-EE-
Q psy11143 8 TELVISGVQREH-GGRYSCVAGNPAGVYRGD-LHVTV---NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMT-WF- 80 (940)
Q Consensus 8 ~tL~I~~v~~sD-sG~Y~C~a~n~~g~~~~~-v~l~V---~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~-W~- 80 (940)
..|.|..+...+ ++.|+|.+.+..|..... +.+.+ ..+|.+. .+.++.+.+|+.++|.|.+.|.|.|.|. |+
T Consensus 123 ~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~ 201 (731)
T 2v5y_A 123 AELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQ 201 (731)
T ss_dssp EEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEE
T ss_pred EEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEe
Confidence 457777663343 589999888888865432 22322 2567776 6778999999999999999999999888 88
Q ss_pred -ECCEeecCCCCeEEE--eeceEEEEcccccCCCeEEEEEEEeCCCc-eEEEEEEEEecccCCeeEecCCceeecCCCcE
Q psy11143 81 -HDGNSLDSDDHVTYE--HDGFVLVLNGVRESDAGVYNCVAQNSEGS-AESVAMIRINGHRAPRLVVKPFDMRAPAGSSV 156 (940)
Q Consensus 81 -kdg~~I~~~~~~~~~--~~gs~L~I~~v~~~DsG~YtC~a~n~~g~-~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~v 156 (940)
++|..+.......+. .....|.|.++...|+|.|+|.|.|..|. ....+.|.|...+. ....+. ........+
T Consensus 202 ~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~--~~~~p~-~~~~~~~~v 278 (731)
T 2v5y_A 202 GIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPV--PIAPPQ-LASVGATYL 278 (731)
T ss_dssp ESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCC--BSSCCE-EEEECSSCE
T ss_pred cCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCC--CCCCcc-eeccCCceE
Confidence 678776532211111 11356899999999999999999999997 45567777765432 222222 222345678
Q ss_pred EEEEEeCC----CCCC--eEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEE--cCCcceeeeeeeeecCC
Q psy11143 157 EIPCKPDG----EPLP--RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTAS--NLLGEDVAEGYLTVTGA 228 (940)
Q Consensus 157 tL~C~v~g----~P~p--~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~--N~~g~~s~s~~L~V~~~ 228 (940)
.|.|.... .|.. .|.|...+.... .........+.|.++.+.+...|+|.|. |..|....+..+.+...
T Consensus 279 ~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~ 355 (731)
T 2v5y_A 279 WIQLNANSINGDGPIVAREVEYCTASGSWN---DRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTK 355 (731)
T ss_dssp EEECCCSSBSSCSCCCEEEEEEEESSSSCE---EEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECC
T ss_pred EEEeCCcccCCCCccEEEEEEEEECCCCce---EEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeec
Confidence 99998642 2222 466765432111 1112234578999999988889999999 98887654444444321
Q ss_pred CCeeeeCCCeeEE--ecCCeEEEEEEEeeeC-------CCeEEEEECCeecCCCC---ceEEeecCeEEEEeeeccCCCe
Q psy11143 229 PPIFIQRPVSTTY--STGSTSRITCLVEGHP-------LPQMTWFHDGNSLDSDD---HVTYEHDGFVLVLNGVRESDAG 296 (940)
Q Consensus 229 ~p~~~~~p~~~~v--~~G~~v~L~C~v~G~P-------~p~ItW~k~g~~l~~~~---~~~~~~~g~sL~I~~v~~~DsG 296 (940)
.......|....+ .....+.|........ .-.|.|...+....... ..........+.|.++......
T Consensus 356 ~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 435 (731)
T 2v5y_A 356 CADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNV 435 (731)
T ss_dssp CCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEE
T ss_pred CCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEE
Confidence 1111122333322 2345677776653211 01344543321000000 0011123345889999988888
Q ss_pred EEEEEEEeCCCCceeEEEEEEeec-cCCeEEEcCCceeec-CCCeEEEEEeecCcC---CC--eEEEEeCCee---ecc-
Q psy11143 297 VYNCVAQNSEGSAESVAMIRINGH-RAPRLVVKPFDMRAP-AGSSVEIPCKPDGEP---LP--RISWSKDEAE---FVE- 365 (940)
Q Consensus 297 ~YtC~A~N~~Gs~~~s~~l~V~~~-~~P~i~~~p~~~~v~-~G~~vtL~C~v~g~P---~p--~i~W~k~g~~---i~~- 365 (940)
.|+..|.|..|... +..+.+.-. .+|... .+..+... ....+.|.......+ .- .|.|...+.. +..
T Consensus 436 ~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p-~~~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~ 513 (731)
T 2v5y_A 436 SVKLILMNPEGRKE-SQELIVQTDEDLPGAV-PTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLS 513 (731)
T ss_dssp EEEEEEECSSCEEE-CCCEEEECCCCCCCCC-CTTTCEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCC
T ss_pred EEEEEEEcCCCCCC-CceEEEEccCCCCCCC-CcceEEeeecCCeEEEEEcCCCCCCCCccceEEEEEECcCCCcccccc
Confidence 88999999998764 334444321 112110 00112221 245788877643222 12 3444332211 000
Q ss_pred CCcEEEe---eeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 366 DRNHKIH---RTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 366 ~~~~~i~---~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
.....+. ...++.|.++.......++..|.|..|....+. +.+...
T Consensus 514 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~ 562 (731)
T 2v5y_A 514 NQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT-NQFTTK 562 (731)
T ss_dssp CCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE-EEEECC
T ss_pred CcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc-cEEEcC
Confidence 1111111 123688899988888888999999999877763 555544
No 334
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.59 E-value=1.5e-14 Score=155.50 Aligned_cols=169 Identities=21% Similarity=0.350 Sum_probs=117.7
Q ss_pred CCeeeeCCCeeEEecCCeEEEEEEEeeeC-----CCeEEEEECC--eec---C---------CCCceEEeec--CeEEEE
Q psy11143 229 PPIFIQRPVSTTYSTGSTSRITCLVEGHP-----LPQMTWFHDG--NSL---D---------SDDHVTYEHD--GFVLVL 287 (940)
Q Consensus 229 ~p~~~~~p~~~~v~~G~~v~L~C~v~G~P-----~p~ItW~k~g--~~l---~---------~~~~~~~~~~--g~sL~I 287 (940)
.+.+...|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ . ...++.+... ..+|+|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 44555667778899999999999998887 5799999853 211 0 1345554432 236999
Q ss_pred eeeccCCCeEEEEEEEeCCCCc-eeEEEEEEeecc-------CC--------------eEEEcCCceeecCCCeEEEEEe
Q psy11143 288 NGVRESDAGVYNCVAQNSEGSA-ESVAMIRINGHR-------AP--------------RLVVKPFDMRAPAGSSVEIPCK 345 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs~-~~s~~l~V~~~~-------~P--------------~i~~~p~~~~v~~G~~vtL~C~ 345 (940)
.+++.+|+|.|+|.+.|..+.. .....|.|.... +| ..+..+....+.+|++++|.|.
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~ 174 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCV 174 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEE
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEE
Confidence 9999999999999999875432 123445554321 12 1233455678999999999999
Q ss_pred ecCcCC--CeEEEEeC--Cee---e----------------ccCCcEEEee-----eceEEEecCCCCCCeEEEEEEEeC
Q psy11143 346 PDGEPL--PRISWSKD--EAE---F----------------VEDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 346 v~g~P~--p~i~W~k~--g~~---i----------------~~~~~~~i~~-----~~sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
+.+.|. +.+.|+|+ +.. + ....++.+.. ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 175 ~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 175 TSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 998864 79999985 221 1 0234666543 247999999999999999999985
No 335
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.58 E-value=7.2e-14 Score=144.85 Aligned_cols=156 Identities=19% Similarity=0.235 Sum_probs=114.8
Q ss_pred eEEecCCeEEEEEEEeeeCCC--eEEEEECCeecCCCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEE
Q psy11143 239 TTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIR 316 (940)
Q Consensus 239 ~~v~~G~~v~L~C~v~G~P~p--~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~ 316 (940)
..+..|++++|.|.+ +.|.| .|.|++.+..+ .+......+..|.|.+++.+|+|.|.|.|.|..+.....+.|.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~lt 92 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLL 92 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEE
Confidence 588899999999999 98888 99999965544 3344444556799999999999999999999988777777777
Q ss_pred EeeccCCeEE-EcCCceeecCCCeEEEEEeecCc-CC----CeEEEEeCCeeeccCCc----E-------------EEee
Q psy11143 317 INGHRAPRLV-VKPFDMRAPAGSSVEIPCKPDGE-PL----PRISWSKDEAEFVEDRN----H-------------KIHR 373 (940)
Q Consensus 317 V~~~~~P~i~-~~p~~~~v~~G~~vtL~C~v~g~-P~----p~i~W~k~g~~i~~~~~----~-------------~i~~ 373 (940)
|. .+|... +.+. ....|+.+ |.|.+.|. |. ++|.|+|++.++..... . .+.-
T Consensus 93 V~--~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~v 167 (210)
T 1gsm_A 93 VY--AFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRV 167 (210)
T ss_dssp EE--BCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEE
T ss_pred EE--ecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEE
Confidence 76 456443 3343 66678888 99999985 74 48999999998853311 1 1111
Q ss_pred eceEEEecCCCCCCeEEEEEEEeCCeeEEE
Q psy11143 374 TGSLRLYNIGPQDSGLYRCTASNLLGEDVA 403 (940)
Q Consensus 374 ~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~ 403 (940)
+++|.+.....++.+.|+|.|.+..-....
T Consensus 168 ts~~~~~~~~~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 168 TERWRLPPLGTPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp EEEEECCCCCSSCCSEEEEEEEEEETTEEE
T ss_pred EEEEeecCCcccCCceEEEEEEeeCCCCcc
Confidence 234555566667778999999996544333
No 336
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.58 E-value=1.9e-14 Score=151.59 Aligned_cols=176 Identities=21% Similarity=0.288 Sum_probs=116.5
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eecC----------------CCCceEEeec----CeEEEEeeec
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD----------------SDDHVTYEHD----GFVLVLNGVR 291 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l~----------------~~~~~~~~~~----g~sL~I~~v~ 291 (940)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+. ...++.+..+ ..+|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 3456788999999999998865 5789999852 2110 1245555432 2369999999
Q ss_pred cCCCeEEEEEEEeCC--CC----ceeEEEEEEee--ccCCeEEEcCCceeecCC-CeEEEEEeecCc-CCC-eEEEEe-C
Q psy11143 292 ESDAGVYNCVAQNSE--GS----AESVAMIRING--HRAPRLVVKPFDMRAPAG-SSVEIPCKPDGE-PLP-RISWSK-D 359 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~--Gs----~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G-~~vtL~C~v~g~-P~p-~i~W~k-~ 359 (940)
.+|+|.|.|.+.+.. +. ......|.|.. ..+|.+........+..| +.++|.|.+.|. |.| .|.|++ +
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 999999999998422 11 11234677754 234655532222234578 999999999986 877 999999 8
Q ss_pred CeeeccC---Cc----EEEeeeceEEEecCCC--CCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 360 EAEFVED---RN----HKIHRTGSLRLYNIGP--QDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 360 g~~i~~~---~~----~~i~~~~sL~I~~v~~--~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
|..+... .. -.....++|.|..... +|.|.|+|.|.|..|.......+.|+.
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp SCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred CCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 8776430 00 1112245788988886 789999999999999877776666554
No 337
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.58 E-value=1.4e-14 Score=153.10 Aligned_cols=172 Identities=16% Similarity=0.264 Sum_probs=119.1
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEE--------------CCEeecCC----CCeEEEee---ceEEEEc
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH--------------DGNSLDSD----DHVTYEHD---GFVLVLN 104 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~k--------------dg~~I~~~----~~~~~~~~---gs~L~I~ 104 (940)
+.+...|..+.+.+|++++|.| ..+.+.+.|.|+| ++..+... .++.+... ...|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4556677888999999999999 6677888999998 22222111 34444422 3468999
Q ss_pred ccccCCCeEEEEEEEeCC----CceEEEEEEEEecc----cCCeeE-ecCCceeecCCCcEEEEEEeCC-CCCC-eEEEe
Q psy11143 105 GVRESDAGVYNCVAQNSE----GSAESVAMIRINGH----RAPRLV-VKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWS 173 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~----g~~~~~~~L~V~~~----~~P~~~-~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~ 173 (940)
+++.+|+|.|+|.+.+.. ......+.|.|... ..|.+. ..+....+.+|+.++|.|.+.+ .|.+ .++|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 999999999999999632 12222455666531 245444 3444555667999999999988 5555 89999
Q ss_pred eCCeeccccCc--------------eEEeeeceEEEeecccCC-CceEEEEEEcCCccee
Q psy11143 174 KDEAEFVEDRN--------------HKIHRTGSLRLYNIGPQD-SGLYRCTASNLLGEDV 218 (940)
Q Consensus 174 k~g~~i~~~~~--------------~~~~~~~sL~I~~v~~~D-sG~YtC~a~N~~g~~s 218 (940)
++|..+..... ..+.....|.|.....+| .|.|+|.|.|......
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 99988764211 112223458888888888 9999999998655433
No 338
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=155.31 Aligned_cols=170 Identities=21% Similarity=0.353 Sum_probs=116.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccC-----CCeEEEEECC--Ee---ec---------CCCCeEEEe--eceEEE
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHP-----LPQMTWFHDG--NS---LD---------SDDHVTYEH--DGFVLV 102 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P-----~p~V~W~kdg--~~---I~---------~~~~~~~~~--~gs~L~ 102 (940)
..+.+...|..+.+.+|++++|.|.+.+.+ .+.|.|+|+. .. +. ...++.... ....|.
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 345667778888999999999999998876 4799999853 21 11 123444432 234689
Q ss_pred EcccccCCCeEEEEEEEeCCCceE-EEEEEEEecccC-------C--------------eeEecCCceeecCCCcEEEEE
Q psy11143 103 LNGVRESDAGVYNCVAQNSEGSAE-SVAMIRINGHRA-------P--------------RLVVKPFDMRAPAGSSVEIPC 160 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g~~~-~~~~L~V~~~~~-------P--------------~~~~~p~~~~v~~Ge~vtL~C 160 (940)
|.+++.+|+|.|+|.+.|..+... ..+.|.|...+. | .....+....+.+|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 999999999999999998754322 234555554211 1 123345567899999999999
Q ss_pred EeCCCCC--CeEEEeeC--Ceecc-------------------ccCceEEee-----eceEEEeecccCCCceEEEEEEc
Q psy11143 161 KPDGEPL--PRISWSKD--EAEFV-------------------EDRNHKIHR-----TGSLRLYNIGPQDSGLYRCTASN 212 (940)
Q Consensus 161 ~v~g~P~--p~ItW~k~--g~~i~-------------------~~~~~~~~~-----~~sL~I~~v~~~DsG~YtC~a~N 212 (940)
.+.+.+. +.+.|+++ +..+. ...++.+.. ..+|.|.+++.+|+|.|+|.+.+
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 9998763 78999984 22210 123444432 24799999999999999999987
Q ss_pred C
Q psy11143 213 L 213 (940)
Q Consensus 213 ~ 213 (940)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 3
No 339
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=1.1e-14 Score=134.69 Aligned_cols=93 Identities=29% Similarity=0.485 Sum_probs=84.4
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.||.|...|.++.+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.++.+..++ +|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 5788999999999999999999999999999999999999999888888776544 7999999999999999999999
Q ss_pred CeeEEEEEEEEEecCC
Q psy11143 398 LGEDVAEGYLTVTGEN 413 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~~ 413 (940)
.|..+.++.|.|..+|
T Consensus 92 ~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCEEEEEEEEEEEcCC
Confidence 9999999999998764
No 340
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=2.8e-14 Score=151.13 Aligned_cols=177 Identities=15% Similarity=0.271 Sum_probs=119.1
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--Ee---ec--------------CCCCeEEEe----eceEE
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---LD--------------SDDHVTYEH----DGFVL 101 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~~---I~--------------~~~~~~~~~----~gs~L 101 (940)
.+...|..+.+.+|++|+|.|.+.+. +.+.|.|+|+. .. +. ...++.+.. ....|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 45556788899999999999999875 56799999843 21 10 123444442 23568
Q ss_pred EEcccccCCCeEEEEEEEeCCC-c----eE--EEEEEEEeccc-----CCeeEe-cCCceeecCCCcEEEEEEeCCC-CC
Q psy11143 102 VLNGVRESDAGVYNCVAQNSEG-S----AE--SVAMIRINGHR-----APRLVV-KPFDMRAPAGSSVEIPCKPDGE-PL 167 (940)
Q Consensus 102 ~I~~v~~~DsG~YtC~a~n~~g-~----~~--~~~~L~V~~~~-----~P~~~~-~p~~~~v~~Ge~vtL~C~v~g~-P~ 167 (940)
.|.+++.+|+|.|.|.+.+... . .. ..+.|.|...+ +|...+ .+....+.+|+.++|.|.+.+. |.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 9999999999999999998631 1 11 13567776532 122222 2444456789999999999985 64
Q ss_pred -CeEEEeeCCe-eccccC--ce-----EEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 168 -PRISWSKDEA-EFVEDR--NH-----KIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 168 -p~ItW~k~g~-~i~~~~--~~-----~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
+.|+|++++. .+.... .. .....+.|.|.++.. + |.|+|.|.|..+.......+.+
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 6999999886 453221 00 112234688887765 4 9999999998887655555544
No 341
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.57 E-value=2e-14 Score=151.93 Aligned_cols=169 Identities=16% Similarity=0.248 Sum_probs=117.5
Q ss_pred eeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEE--------------CCeecCC----CCceEEeec---CeEEEEee
Q psy11143 231 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFH--------------DGNSLDS----DDHVTYEHD---GFVLVLNG 289 (940)
Q Consensus 231 ~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k--------------~g~~l~~----~~~~~~~~~---g~sL~I~~ 289 (940)
.+...+....+.+|++++|.| ..+.+.+.+.|+| ++..... ..++.+... ..+|.|.+
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 82 (245)
T 4ei6_B 4 KVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQP 82 (245)
T ss_dssp CCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECS
T ss_pred ceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECC
Confidence 345567778899999999999 6778889999998 2221111 145555432 23699999
Q ss_pred eccCCCeEEEEEEEeCC----CCceeEEEEEEee----ccCCeEE-EcCCceeecCCCeEEEEEeecC-cCCC-eEEEEe
Q psy11143 290 VRESDAGVYNCVAQNSE----GSAESVAMIRING----HRAPRLV-VKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSK 358 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~----Gs~~~s~~l~V~~----~~~P~i~-~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k 358 (940)
++.+|+|.|+|.+.+.. ........+.|.. ..+|.+. ..+....+.+|+.++|.|.+.| .|.+ .|.|++
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~ 162 (245)
T 4ei6_B 83 TALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 162 (245)
T ss_dssp CCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEE
Confidence 99999999999999642 2222334566653 2456554 3444455667999999999998 4555 899999
Q ss_pred CCeeeccCCcE--------------EEeeeceEEEecCCCCC-CeEEEEEEEeCCee
Q psy11143 359 DEAEFVEDRNH--------------KIHRTGSLRLYNIGPQD-SGLYRCTASNLLGE 400 (940)
Q Consensus 359 ~g~~i~~~~~~--------------~i~~~~sL~I~~v~~~D-~G~YtC~A~N~~G~ 400 (940)
+|..+...... .....+.|.|.....+| .|.|+|.|.|....
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 163 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 99887643211 11123458888888888 99999999996543
No 342
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.57 E-value=3.2e-14 Score=150.37 Aligned_cols=171 Identities=20% Similarity=0.344 Sum_probs=117.5
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEee--------------cCCCCeEEEe---eceEEEEccccc
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSL--------------DSDDHVTYEH---DGFVLVLNGVRE 108 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~I--------------~~~~~~~~~~---~gs~L~I~~v~~ 108 (940)
+...|..+.+.+|+.|+|.|.+.+.|.+.|.|+|. +... ....++.+.. ....|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 45567788999999999999999989999999982 1110 0112333332 234689999999
Q ss_pred CCCeEEEEEEEeCCC-----ceE-EEEEEEEecc----cCCeeEe-cCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeC
Q psy11143 109 SDAGVYNCVAQNSEG-----SAE-SVAMIRINGH----RAPRLVV-KPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKD 175 (940)
Q Consensus 109 ~DsG~YtC~a~n~~g-----~~~-~~~~L~V~~~----~~P~~~~-~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~ 175 (940)
+|+|.|+|.+.+..| ... ....|.|... ..|.+.+ .+....+.+|+.++|.|.+.+ .|.+ .++|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999998332 111 2345666541 2455443 333444566999999999998 4544 7899999
Q ss_pred CeeccccC--------------ceEEeeeceEEEeecccCC-CceEEEEEEcCCccee
Q psy11143 176 EAEFVEDR--------------NHKIHRTGSLRLYNIGPQD-SGLYRCTASNLLGEDV 218 (940)
Q Consensus 176 g~~i~~~~--------------~~~~~~~~sL~I~~v~~~D-sG~YtC~a~N~~g~~s 218 (940)
|..+.... ...+.....|.|......| .|.|+|.|.|......
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 98875421 1122233468888888888 6699999998765544
No 343
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.57 E-value=2.1e-14 Score=151.38 Aligned_cols=170 Identities=14% Similarity=0.231 Sum_probs=117.2
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--------------CEeec---CCCCeEEEe---eceEEEEccc
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--------------GNSLD---SDDHVTYEH---DGFVLVLNGV 106 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--------------g~~I~---~~~~~~~~~---~gs~L~I~~v 106 (940)
.+...|..+.+.+|++|+|.|.+.+ +.+.|.|||. +.... ...++.+.. ....|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 4556677889999999999999976 7779999982 21111 113444432 2346899999
Q ss_pred ccCCCeEEEEEEEeCCC---ceEEEEEEEEec----ccCCeeEe-cCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCC
Q psy11143 107 RESDAGVYNCVAQNSEG---SAESVAMIRING----HRAPRLVV-KPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDE 176 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g---~~~~~~~L~V~~----~~~P~~~~-~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g 176 (940)
+.+|+|.|+|.+.+..+ .....+.|.|.. ...|.+.+ .+....+.+|+.++|.|.+.+ .|.+ .++|+++|
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 99999999999984322 112244566653 13455543 344456667999999999998 6666 79999999
Q ss_pred eeccccCce----------EEeeeceEEEeecccCC-CceEEEEEEcCCcce
Q psy11143 177 AEFVEDRNH----------KIHRTGSLRLYNIGPQD-SGLYRCTASNLLGED 217 (940)
Q Consensus 177 ~~i~~~~~~----------~~~~~~sL~I~~v~~~D-sG~YtC~a~N~~g~~ 217 (940)
..+...... .+...+.|.|..+..+| .|.|+|.|.|.....
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 887543221 11223358899998888 669999999875543
No 344
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.57 E-value=1.7e-14 Score=154.85 Aligned_cols=171 Identities=15% Similarity=0.225 Sum_probs=118.3
Q ss_pred CeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEEC--CEe------------ecCC----CCeEEEe---eceEEEEc
Q psy11143 46 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNS------------LDSD----DHVTYEH---DGFVLVLN 104 (940)
Q Consensus 46 P~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kd--g~~------------I~~~----~~~~~~~---~gs~L~I~ 104 (940)
+.+...|..+.+.+|++|+|.|.+. .+.+.|.|||. +.. .... .++.+.. ....|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 4556677888999999999999987 57789999982 211 1111 3444442 24568999
Q ss_pred ccccCCCeEEEEEEEeCC--CceEEEEEEEEecc----cCCeeEe-cCCceeecCCCcEEEEEEeCCCCC-C-eEEEeeC
Q psy11143 105 GVRESDAGVYNCVAQNSE--GSAESVAMIRINGH----RAPRLVV-KPFDMRAPAGSSVEIPCKPDGEPL-P-RISWSKD 175 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~--g~~~~~~~L~V~~~----~~P~~~~-~p~~~~v~~Ge~vtL~C~v~g~P~-p-~ItW~k~ 175 (940)
+++.+|+|.|+|.+.+.. ........|.|... ..|.+.+ .+....+.+|+.++|.|.+.+.++ + .++|+++
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 999999999999999742 22222445666541 2354443 444556667999999999998554 4 8999999
Q ss_pred CeeccccC--------------ceEEeeeceEEEeecccCC-CceEEEEEEcCCcce
Q psy11143 176 EAEFVEDR--------------NHKIHRTGSLRLYNIGPQD-SGLYRCTASNLLGED 217 (940)
Q Consensus 176 g~~i~~~~--------------~~~~~~~~sL~I~~v~~~D-sG~YtC~a~N~~g~~ 217 (940)
|..+.... ...+.....|.|.....+| .|.|+|.|.|.....
T Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 186 GKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp SSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred CEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 98875421 1112223467888887777 999999999875543
No 345
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.57 E-value=2.1e-14 Score=154.04 Aligned_cols=171 Identities=19% Similarity=0.271 Sum_probs=116.9
Q ss_pred CeeEecCCceeecCCCcEEEEEEeCCCCCCeEEEee--CCeecc------------c----cCceEEee----eceEEEe
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSK--DEAEFV------------E----DRNHKIHR----TGSLRLY 196 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k--~g~~i~------------~----~~~~~~~~----~~sL~I~ 196 (940)
+.+...+..+.+.+|++++|.|.+. .+.+.+.|+| .+.... . ..++.+.. +.+|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 3455566778899999999999987 5778999998 222110 0 03444443 4579999
Q ss_pred ecccCCCceEEEEEEcC--CcceeeeeeeeecC-----CCCeee-eCCCeeEEecCCeEEEEEEEeeeCCC--eEEEEEC
Q psy11143 197 NIGPQDSGLYRCTASNL--LGEDVAEGYLTVTG-----APPIFI-QRPVSTTYSTGSTSRITCLVEGHPLP--QMTWFHD 266 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~--~g~~s~s~~L~V~~-----~~p~~~-~~p~~~~v~~G~~v~L~C~v~G~P~p--~ItW~k~ 266 (940)
+++.+|+|.|+|.+.+. .........|.|.. .+|.+. ..+....+..|+.++|.|.+.|.+++ .|+|+++
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 99999999999999974 22333444566653 134333 34444556679999999999996654 8999999
Q ss_pred CeecCCCCceEE--------eecC-----eEEEEeeeccCC-CeEEEEEEEeCCCCce
Q psy11143 267 GNSLDSDDHVTY--------EHDG-----FVLVLNGVRESD-AGVYNCVAQNSEGSAE 310 (940)
Q Consensus 267 g~~l~~~~~~~~--------~~~g-----~sL~I~~v~~~D-sG~YtC~A~N~~Gs~~ 310 (940)
|..+........ ..++ ..|.|.....+| .|.|+|.|.|......
T Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~~ 243 (268)
T 3pl6_D 186 GKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 243 (268)
T ss_dssp SSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCCC
Confidence 998864321110 0111 236777777777 9999999999865543
No 346
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.57 E-value=5.2e-15 Score=155.90 Aligned_cols=167 Identities=14% Similarity=0.153 Sum_probs=113.9
Q ss_pred eCCCeeEEecCCeEEEEEEEeee-CC-C-eEEEEECCeec-CCCCceE-EeecC-----eEEEEeeeccCCCeEEEEEEE
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGH-PL-P-QMTWFHDGNSL-DSDDHVT-YEHDG-----FVLVLNGVRESDAGVYNCVAQ 303 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~-P~-p-~ItW~k~g~~l-~~~~~~~-~~~~g-----~sL~I~~v~~~DsG~YtC~A~ 303 (940)
..|....+..|+.++|.|.+.|. |. | .|+|+++|..+ ....... ...++ ..|.|.++..+|.|.|+|.|.
T Consensus 18 ~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~ 97 (231)
T 2w59_A 18 IPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQ 97 (231)
T ss_dssp ECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred eCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEE
Confidence 45556667899999999999995 64 5 99999999877 3322211 11222 249999999999999999999
Q ss_pred eCCCCceeEEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecCc-C-CCeEEEEeCCeeeccCCcE----EE----
Q psy11143 304 NSEGSAESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWSKDEAEFVEDRNH----KI---- 371 (940)
Q Consensus 304 N~~Gs~~~s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P-~p~i~W~k~g~~i~~~~~~----~i---- 371 (940)
|..+.......+.+. ...+|.+.+.+.......+..++|.|.+.|. | .+.|+|+|+|..+...... ..
T Consensus 98 ~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 177 (231)
T 2w59_A 98 HEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERT 177 (231)
T ss_dssp CTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTT
T ss_pred cCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCccc
Confidence 988654333333221 1246766543322112235579999999986 4 3699999999887544211 11
Q ss_pred -----------eeeceEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 372 -----------HRTGSLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 372 -----------~~~~sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
...+.|.|.....+|.|.|+|.|.|....
T Consensus 178 ~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 178 ANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp SCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 11235778888778899999999997654
No 347
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.56 E-value=2.8e-14 Score=150.37 Aligned_cols=168 Identities=14% Similarity=0.210 Sum_probs=116.6
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--------------Ceec---CCCCceEEeec---CeEEEEeeec
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--------------GNSL---DSDDHVTYEHD---GFVLVLNGVR 291 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--------------g~~l---~~~~~~~~~~~---g~sL~I~~v~ 291 (940)
+...+....+.+|++++|.|.+.+ +.+.|.|+|. +... ....++.+..+ ..+|.|.+++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 445567788999999999999876 7789999982 1111 11234544432 3469999999
Q ss_pred cCCCeEEEEEEEeCCC---CceeEEEEEEee----ccCCeEEE-cCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCe
Q psy11143 292 ESDAGVYNCVAQNSEG---SAESVAMIRING----HRAPRLVV-KPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEA 361 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~G---s~~~s~~l~V~~----~~~P~i~~-~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~ 361 (940)
.+|+|.|+|.+.+..+ .......+.|.. ..+|.+.. .+....+..|+.++|.|.+.| .|.| .+.|+++|.
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~ 163 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGK 163 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCE
Confidence 9999999999984322 222334566652 24566554 444445667999999999998 6666 899999999
Q ss_pred eeccCCcE----EEe------eeceEEEecCCCCC-CeEEEEEEEeCCee
Q psy11143 362 EFVEDRNH----KIH------RTGSLRLYNIGPQD-SGLYRCTASNLLGE 400 (940)
Q Consensus 362 ~i~~~~~~----~i~------~~~sL~I~~v~~~D-~G~YtC~A~N~~G~ 400 (940)
.+...... ... ..+.|.|.....+| .|.|+|.|.|....
T Consensus 164 ~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 164 EVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 87643221 111 22358899888888 77999999997553
No 348
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.56 E-value=2.1e-14 Score=148.74 Aligned_cols=175 Identities=13% Similarity=0.207 Sum_probs=111.7
Q ss_pred eCCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--E---ee---c----------CCCCeEEEe--eceEEEEcccc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--N---SL---D----------SDDHVTYEH--DGFVLVLNGVR 107 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~---~I---~----------~~~~~~~~~--~gs~L~I~~v~ 107 (940)
.+|..+.+.+|++|+|.|.+.+. +.+.|.|||.. . .+ . ...++.+.. ....|.|.+++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 34567789999999999999863 35689999742 1 11 0 122333332 22358999999
Q ss_pred cCCCeEEEEEEEeCCCc----eEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCCCC--CeEEEeeCCeec
Q psy11143 108 ESDAGVYNCVAQNSEGS----AESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL--PRISWSKDEAEF 179 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g~----~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~P~--p~ItW~k~g~~i 179 (940)
.+|+|.|.|.+.+..+. ....+.|.|... ..|.+...+....+.+|+.++|.|.+.+.++ ..+.|++++..+
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 163 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTN 163 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEEC
Confidence 99999999999987653 122345666522 3456654454556778999999999988533 368899988754
Q ss_pred cccCc-eEEeeeceEEE---eecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 180 VEDRN-HKIHRTGSLRL---YNIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 180 ~~~~~-~~~~~~~sL~I---~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
..... .....++.+.+ ..+...| |.|+|.|.|..+.......|.+
T Consensus 164 ~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 164 GVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp TEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred CeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 32211 11222334444 4566777 9999999999887666655543
No 349
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.56 E-value=6.1e-14 Score=145.95 Aligned_cols=163 Identities=15% Similarity=0.329 Sum_probs=115.7
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eec------C-------------CCCceEEeecC----eEEEEe
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL------D-------------SDDHVTYEHDG----FVLVLN 288 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l------~-------------~~~~~~~~~~g----~sL~I~ 288 (940)
+....+.+|++++|.|.+.+.+ .+.+.|++.. ... . ...++.+..++ .+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 4456788999999999998743 6799999742 111 0 12345554332 359999
Q ss_pred eeccCCCeEEEEEEEeCC--CCceeEEEEEEe--eccCCeEE-EcCCceeecCCCeEEEEEeecC-cCC-C-eEEEEeCC
Q psy11143 289 GVRESDAGVYNCVAQNSE--GSAESVAMIRIN--GHRAPRLV-VKPFDMRAPAGSSVEIPCKPDG-EPL-P-RISWSKDE 360 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~--Gs~~~s~~l~V~--~~~~P~i~-~~p~~~~v~~G~~vtL~C~v~g-~P~-p-~i~W~k~g 360 (940)
+++.+|+|.|.|.+.+.. ........+.|. ...+|.+. ..+... .+|+.++|.|.+.+ .|. + .|.|+++|
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g 164 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESG 164 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCS
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECC
Confidence 999999999999999874 222333456664 23456665 333333 78999999999998 776 4 99999998
Q ss_pred eeec----------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEE
Q psy11143 361 AEFV----------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 361 ~~i~----------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~ 402 (940)
..+. .+..+.+ .+.|.|.....+|.|.|+|.|.|..|...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 165 QGVTARNFPPSQDASGDLYTT--SSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp TTCEEEECCCEECSSSSCEEE--EEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EECceEEcCceeeCCCCcEEE--EEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 7652 2233332 34699999999999999999999887543
No 350
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.56 E-value=6.4e-14 Score=152.89 Aligned_cols=165 Identities=16% Similarity=0.298 Sum_probs=115.2
Q ss_pred eCCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---ec--------------CCCCeEEEe----eceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---LD--------------SDDHVTYEH----DGFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I~--------------~~~~~~~~~----~gs~L~I~ 104 (940)
.+|..+.+.+|++++|.|.+.+.| .+.|.|+|+. .. +. ...++.+.. ....|.|.
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 106 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELS 106 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEEC
T ss_pred EcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEEC
Confidence 346678899999999999998876 5789999853 11 10 012333332 13468999
Q ss_pred ccccCCCeEEEEEEEeCC-CceE----EEEEEEEecc--------------cCCeeEecCCceeecCCCcEEEEEEeCCC
Q psy11143 105 GVRESDAGVYNCVAQNSE-GSAE----SVAMIRINGH--------------RAPRLVVKPFDMRAPAGSSVEIPCKPDGE 165 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~-g~~~----~~~~L~V~~~--------------~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~ 165 (940)
+++.+|+|.|+|.+.+.. |... ..+.|.|... ..+.+...+....+.+|++++|.|.+.+.
T Consensus 107 ~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 186 (291)
T 2gki_A 107 SLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQS 186 (291)
T ss_dssp SCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSC
T ss_pred cCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCc
Confidence 999999999999999874 2111 1345666551 12344455667789999999999999988
Q ss_pred CCC------eEEEeeCC--eecc---c---------cCceEEee---eceEEEeecccCCCceEEEEEEcCC
Q psy11143 166 PLP------RISWSKDE--AEFV---E---------DRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 166 P~p------~ItW~k~g--~~i~---~---------~~~~~~~~---~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
|.+ .+.|+|+. ..+. . ..++.... ..+|.|.+++.+|+|.|+|.+.|..
T Consensus 187 ~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 187 LFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 765 89999952 2111 0 23333322 2379999999999999999999853
No 351
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.56 E-value=7.1e-14 Score=147.20 Aligned_cols=175 Identities=16% Similarity=0.231 Sum_probs=112.9
Q ss_pred cCCceeecCCCcEEEEEEeCCCC--CCeEEEeeCC--eecc----------------ccCceEEee-----eceEEEeec
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKDE--AEFV----------------EDRNHKIHR-----TGSLRLYNI 198 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~g--~~i~----------------~~~~~~~~~-----~~sL~I~~v 198 (940)
.+....+.+|++++|.|.+.+.+ .+.+.|++.. ..+. ...++.+.. ..+|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSV 85 (232)
T ss_dssp EECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCC
Confidence 34567889999999999998764 5789999842 2110 123454443 227999999
Q ss_pred ccCCCceEEEEEEcCC--cc----eeeeeeeeecC---CCCeeeeCCCeeEEecC-CeEEEEEEEeee-CCC-eEEEEE-
Q psy11143 199 GPQDSGLYRCTASNLL--GE----DVAEGYLTVTG---APPIFIQRPVSTTYSTG-STSRITCLVEGH-PLP-QMTWFH- 265 (940)
Q Consensus 199 ~~~DsG~YtC~a~N~~--g~----~s~s~~L~V~~---~~p~~~~~p~~~~v~~G-~~v~L~C~v~G~-P~p-~ItW~k- 265 (940)
+.+|+|.|.|.+.+.. +. ....+.|.|.. .+|.+........+..| +.++|.|.+.|. |.| .|+|++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~ 165 (232)
T 1dn0_B 86 TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYK 165 (232)
T ss_dssp CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEET
T ss_pred CcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcC
Confidence 9999999999998422 11 22345677764 23444322222234578 999999999986 776 999999
Q ss_pred CCeecCCC---Cce----EEeecCeEEEEeeecc--CCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 266 DGNSLDSD---DHV----TYEHDGFVLVLNGVRE--SDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 266 ~g~~l~~~---~~~----~~~~~g~sL~I~~v~~--~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
+|..+... ... .+.. ...|.|..... +|.|.|+|.|.|..+.......+.|..
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~-~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 166 NNSDISSTRGFPSVLRGGKYAA-TSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp TSCEECCEEECCCEEETTEEEE-EEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred CCCceeeEEECCccccCCcEEE-EEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 88877541 000 1111 12478887776 789999999999999876666655543
No 352
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.56 E-value=1.3e-14 Score=149.86 Aligned_cols=157 Identities=15% Similarity=0.243 Sum_probs=102.5
Q ss_pred ecCCeEEEEEEEeeeCC----CeEEEEECCeecCCCCc--eEEeecCeEEEEe------eeccCCCeEEEEEEEeCCCCc
Q psy11143 242 STGSTSRITCLVEGHPL----PQMTWFHDGNSLDSDDH--VTYEHDGFVLVLN------GVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 242 ~~G~~v~L~C~v~G~P~----p~ItW~k~g~~l~~~~~--~~~~~~g~sL~I~------~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
.+|++++|.|.+.|.++ +.|+|+|++..+..... .....++. +.+. .....|+|.|+|.|.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~-~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNST-YRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSC-EEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCc-EEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 68999999999999753 49999999987754311 11112232 4333 223345999999999998865
Q ss_pred eeEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeeccCC--cEEEeeec------eE
Q psy11143 310 ESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFVEDR--NHKIHRTG------SL 377 (940)
Q Consensus 310 ~~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~~~~--~~~i~~~~------sL 377 (940)
.....+.+ ....+|.+...+.......|..++|.|.+.|. |.+ .|+|+|+|..+.... ......++ .|
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 174 (207)
T 1l6x_A 95 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL 174 (207)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred ceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEE
Confidence 44333422 33467777655443322346669999999985 543 999999998775321 11112233 34
Q ss_pred EEecCCCCCCeEEEEEEEeCCe
Q psy11143 378 RLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 378 ~I~~v~~~D~G~YtC~A~N~~G 399 (940)
.|.....+|.|.|+|.|.|...
T Consensus 175 ~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 175 TVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEHHHHHTTCCEEEEEECTTS
T ss_pred EECHHHcCCCCEEEEEEEcCCc
Confidence 5555555679999999999754
No 353
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.56 E-value=2e-14 Score=155.99 Aligned_cols=177 Identities=18% Similarity=0.295 Sum_probs=119.7
Q ss_pred CCeeEEecCCeEEEEEEEeee--CCCeEEEEECC--eecC-----------------CCCceEEeecC----eEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NSLD-----------------SDDHVTYEHDG----FVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~--P~p~ItW~k~g--~~l~-----------------~~~~~~~~~~g----~sL~I~~v 290 (940)
|....+.+|++++|.|.+.+. +.+.+.|++.. .... ...++.+..++ .+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 667788999999999999875 56799999742 1110 11244444222 35999999
Q ss_pred ccCCCeEEEEEEEeCC---------CCceeEEEEEEee-------------ccCCeEEEcCCceeecCCCeEEEEEeecC
Q psy11143 291 RESDAGVYNCVAQNSE---------GSAESVAMIRING-------------HRAPRLVVKPFDMRAPAGSSVEIPCKPDG 348 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~---------Gs~~~s~~l~V~~-------------~~~P~i~~~p~~~~v~~G~~vtL~C~v~g 348 (940)
+.+|+|.|.|.+.|.. ........|.|.. ..+|.+...|. ..+.+|++|+|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 9999999999999871 1122234555543 12455555555 88999999999999998
Q ss_pred -cC-CCeEEEEeC--Ceeec------------cCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeCCee---EEEEEE
Q psy11143 349 -EP-LPRISWSKD--EAEFV------------EDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNLLGE---DVAEGY 406 (940)
Q Consensus 349 -~P-~p~i~W~k~--g~~i~------------~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~~G~---~~~s~~ 406 (940)
.+ .+.+.|+|. +.... ...++.+...+ +|.|.+++.+|+|.|.|.+.|..+. ....+.
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~ 245 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTK 245 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCE
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEE
Confidence 44 379999873 22111 12455554433 5999999999999999999998621 223446
Q ss_pred EEEecCC
Q psy11143 407 LTVTGEN 413 (940)
Q Consensus 407 L~V~~~~ 413 (940)
|.|...+
T Consensus 246 l~V~~~~ 252 (280)
T 3fku_X 246 LTVLGQP 252 (280)
T ss_dssp EEEC---
T ss_pred EEECCCC
Confidence 7776543
No 354
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.56 E-value=8.2e-15 Score=151.31 Aligned_cols=171 Identities=16% Similarity=0.244 Sum_probs=106.1
Q ss_pred CeEEeCCCcEEE--ecCCeEEEEEEeeccCC----CeEEEEECCEeecCCCC--eEEEeeceE-----EEEcccccCCCe
Q psy11143 46 PIFIQRPVSTTY--STGSTSRITCLVEGHPL----PQMTWFHDGNSLDSDDH--VTYEHDGFV-----LVLNGVRESDAG 112 (940)
Q Consensus 46 P~~~~~p~~~~V--~eGesv~L~C~v~g~P~----p~V~W~kdg~~I~~~~~--~~~~~~gs~-----L~I~~v~~~DsG 112 (940)
|.+...|....+ .+|+.++|.|.+.|.++ +.|+|+|++..+..... .....++.+ |.|.....+|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 334444433333 79999999999998652 49999999988754311 111122221 233333445599
Q ss_pred EEEEEEEeCCCceEEEEEEEE--ecccCCeeEecCCceeecCCCcEEEEEEeCC-CCC-CeEEEeeCCeeccccCc--eE
Q psy11143 113 VYNCVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPL-PRISWSKDEAEFVEDRN--HK 186 (940)
Q Consensus 113 ~YtC~a~n~~g~~~~~~~L~V--~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~-p~ItW~k~g~~i~~~~~--~~ 186 (940)
.|+|.|.|..+.......+.+ ....+|.+.+.+.......|..++|.|.+.| .|. +.|+|+++|..+..... ..
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 161 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV 161 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCE
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCce
Confidence 999999998876533333322 2334566555444333335666999999998 454 49999999987753211 11
Q ss_pred Eeeec------eEEEeecccCCCceEEEEEEcCCcc
Q psy11143 187 IHRTG------SLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 187 ~~~~~------sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
...++ .|.|......|.|.|+|.|.|....
T Consensus 162 ~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 162 LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 12222 3555555556799999999997543
No 355
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.55 E-value=6.5e-15 Score=155.20 Aligned_cols=172 Identities=15% Similarity=0.168 Sum_probs=115.7
Q ss_pred CCeE-EeCCCcEEEecCCeEEEEEEeecc-CC-C-eEEEEECCEee-cCCCCeE-EEeec-----eEEEEcccccCCCeE
Q psy11143 45 PPIF-IQRPVSTTYSTGSTSRITCLVEGH-PL-P-QMTWFHDGNSL-DSDDHVT-YEHDG-----FVLVLNGVRESDAGV 113 (940)
Q Consensus 45 pP~~-~~~p~~~~V~eGesv~L~C~v~g~-P~-p-~V~W~kdg~~I-~~~~~~~-~~~~g-----s~L~I~~v~~~DsG~ 113 (940)
+|.+ ...|....+.+|+.++|.|.+.|. |. + .|+|+++|..+ ....... ...++ ..|.|.+++.+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 4444 456777778899999999999984 64 4 99999999877 3222211 11222 358999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEe--cccCCeeEecCCceeecCCCcEEEEEEeCCC-C-CCeEEEeeCCeeccccCce----
Q psy11143 114 YNCVAQNSEGSAESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWSKDEAEFVEDRNH---- 185 (940)
Q Consensus 114 YtC~a~n~~g~~~~~~~L~V~--~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P-~p~ItW~k~g~~i~~~~~~---- 185 (940)
|+|.|.|..+.......+.+. ...+|.+.+.+.......|..++|.|.+.|. | .+.|+|+++|..+......
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 171 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAV 171 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCC
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCcc
Confidence 999999987654333333221 1134555443322222235679999999984 4 3699999999887543211
Q ss_pred ---------------EEeeeceEEEeecccCCCceEEEEEEcCCcc
Q psy11143 186 ---------------KIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 186 ---------------~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
.+...+.|.|......|.|.|+|.|.|....
T Consensus 172 ~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 172 LPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp EECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 1112235778888888899999999997654
No 356
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.55 E-value=4.5e-14 Score=149.24 Aligned_cols=170 Identities=21% Similarity=0.344 Sum_probs=117.1
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--Ceec--------------CCCCceEEee---cCeEEEEeeecc
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSL--------------DSDDHVTYEH---DGFVLVLNGVRE 292 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l--------------~~~~~~~~~~---~g~sL~I~~v~~ 292 (940)
+...+....+.+|++++|.|.+.+.|.+.+.|+|. +... ....++.+.. ...+|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 34456778899999999999999999999999993 2110 1123444432 223599999999
Q ss_pred CCCeEEEEEEEeCCC------CceeEEEEEEee----ccCCeEEE-cCCceeecCCCeEEEEEeecCc-CCC-eEEEEeC
Q psy11143 293 SDAGVYNCVAQNSEG------SAESVAMIRING----HRAPRLVV-KPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKD 359 (940)
Q Consensus 293 ~DsG~YtC~A~N~~G------s~~~s~~l~V~~----~~~P~i~~-~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~ 359 (940)
+|+|.|+|.+.|..| .......+.|.. ..+|.+.. .+....+..|+.++|.|.+.|. |.+ .+.|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999999332 112234566653 23566554 3333445669999999999985 545 7999999
Q ss_pred CeeeccCCcE--------------EEeeeceEEEecCCCCC-CeEEEEEEEeCCeeE
Q psy11143 360 EAEFVEDRNH--------------KIHRTGSLRLYNIGPQD-SGLYRCTASNLLGED 401 (940)
Q Consensus 360 g~~i~~~~~~--------------~i~~~~sL~I~~v~~~D-~G~YtC~A~N~~G~~ 401 (940)
|..+...... .....+.|.|.....+| .|.|+|.|.|.....
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 9887543211 11223468888887777 679999999976543
No 357
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.55 E-value=4.3e-14 Score=150.83 Aligned_cols=174 Identities=13% Similarity=0.239 Sum_probs=116.9
Q ss_pred CCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--E---ee--------------cCCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--N---SL--------------DSDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~---~I--------------~~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++|+|.|.+.+. +...+.|||.. . .+ ....++.+..+ ...|.|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3556789999999999999763 35689999842 1 11 01134444422 23489999
Q ss_pred cccCCCeEEEEEEEeCC----CceEEEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCCe
Q psy11143 106 VRESDAGVYNCVAQNSE----GSAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEA 177 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~----g~~~~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g~ 177 (940)
++.+|+|.|.|.+.+.. ......+.|.|.. ...|.+...+....+..|+.++|.|.+.+ .|.+ .++|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 99999999999998763 1122234566652 23466654555556778999999999998 6766 899999886
Q ss_pred eccc-------cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 178 EFVE-------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 178 ~i~~-------~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.+.. .. ..+...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 166 ~~~~~~~~~~~~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 166 SSGVHTFPAVLQS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CTTEEECCCEEET-TEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ecceEeCCccccC-CeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 3210 11 123334679999999999 99999999998877766666554
No 358
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.55 E-value=6.9e-14 Score=150.45 Aligned_cols=168 Identities=18% Similarity=0.280 Sum_probs=115.4
Q ss_pred EeCCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Eee------c-----------CCCCeEEEee----ceEEEE
Q psy11143 49 IQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL------D-----------SDDHVTYEHD----GFVLVL 103 (940)
Q Consensus 49 ~~~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~I------~-----------~~~~~~~~~~----gs~L~I 103 (940)
..+|..+.+.+|++|+|.|.+.+.+ .+.|.|||+. ..+ . ...++.+..+ ...|.|
T Consensus 10 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 89 (261)
T 2xqy_G 10 LQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQL 89 (261)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred EECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEE
Confidence 3456778899999999999999876 5799999863 211 1 0234444432 346899
Q ss_pred cccccCCCeEEEEEEEeCCCce-E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCC-CCCC-eEEEeeCC
Q psy11143 104 NGVRESDAGVYNCVAQNSEGSA-E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDE 176 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~~g~~-~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~p-~ItW~k~g 176 (940)
.+++.+|+|.|.|.+.+..+.. . ..+.|.|... .+|.+...+....+.+|+.++|.|.+.+ .|.+ .|.|++++
T Consensus 90 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g 169 (261)
T 2xqy_G 90 SSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGS 169 (261)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCC
Confidence 9999999999999999864321 1 2346777642 2355554333345678999999999987 4766 99999988
Q ss_pred eecccc--Cc----eEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 177 AEFVED--RN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 177 ~~i~~~--~~----~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
..+... .. ......+.|.|.++..+| |.|+|.|.|.....
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 170 LSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 764211 10 122234579999888878 99999999965543
No 359
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.55 E-value=7.2e-15 Score=156.24 Aligned_cols=193 Identities=16% Similarity=0.252 Sum_probs=112.5
Q ss_pred eEEEEEEEcCCceEEEEEEEEEeCCCeEEeCCCcEE-EecCCeEEEEEEeeccC----CCeEEEEECCEeecCCCCe--E
Q psy11143 21 GRYSCVAGNPAGVYRGDLHVTVNAPPIFIQRPVSTT-YSTGSTSRITCLVEGHP----LPQMTWFHDGNSLDSDDHV--T 93 (940)
Q Consensus 21 G~Y~C~a~n~~g~~~~~v~l~V~~pP~~~~~p~~~~-V~eGesv~L~C~v~g~P----~p~V~W~kdg~~I~~~~~~--~ 93 (940)
|.|.|.+++..+. ..-...+..|+.++..|.... +..|+.++|.|.+.|.+ ..+|+|+|+|..+...... .
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~ 78 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE 78 (240)
T ss_dssp ------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCE
T ss_pred CceeeeeeecCCC--CCccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccce
Confidence 7899999987663 111111123445555666665 66799999999999853 3489999999988542110 0
Q ss_pred EEeec-----eEEEEcccccCCCeEEEEEEEeCCCceEEEEEEE--EecccCCeeEecCCceeecCCCcEEEEEEeCC-C
Q psy11143 94 YEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIR--INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-E 165 (940)
Q Consensus 94 ~~~~g-----s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~--V~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~ 165 (940)
...++ +.|.|.....+|.|.|+|.|.+..+.......+. +....+|.+.+.+......+|+.++|.|.+.+ +
T Consensus 79 ~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~ 158 (240)
T 4acp_A 79 EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFY 158 (240)
T ss_dssp EC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEB
T ss_pred ECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEe
Confidence 11111 3468888888899999999999876433333332 22334577776665544445999999999998 5
Q ss_pred CCC-eEEEeeCCeeccccC--------ceEEeeeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 166 PLP-RISWSKDEAEFVEDR--------NHKIHRTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 166 P~p-~ItW~k~g~~i~~~~--------~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
|.+ .|+|+++|..+.... ...+...+.|.|......+.|.|+|.|.+..-
T Consensus 159 P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 159 PSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp SSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 654 899999998764211 11122234567766666789999999998653
No 360
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.55 E-value=1e-14 Score=154.84 Aligned_cols=167 Identities=18% Similarity=0.239 Sum_probs=113.2
Q ss_pred eeCCCeeE-EecCCeEEEEEEEeee---CCC-eEEEEECCeecCCCCc---e-----EEeecCeEEEEeeeccCCCeEEE
Q psy11143 233 IQRPVSTT-YSTGSTSRITCLVEGH---PLP-QMTWFHDGNSLDSDDH---V-----TYEHDGFVLVLNGVRESDAGVYN 299 (940)
Q Consensus 233 ~~~p~~~~-v~~G~~v~L~C~v~G~---P~p-~ItW~k~g~~l~~~~~---~-----~~~~~g~sL~I~~v~~~DsG~Yt 299 (940)
...+.... +.+|++++|.|.+.|. |.+ .|+|+|++..+..... . .+. ....|.|.++..+|+|.|+
T Consensus 20 ~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~s~L~I~~~~~~D~g~Y~ 98 (239)
T 1i1c_A 20 IFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLR-SVSELPIVERDWLNGKTFK 98 (239)
T ss_dssp EECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEE-EEEEEECCHHHHHTTCCEE
T ss_pred EECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEE-EEEEEEEEhhHccCCCeEE
Confidence 33333333 6799999999999987 776 9999999876643210 0 011 1134999999999999999
Q ss_pred EEEEeCCCCceeEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCeeeccCC--cEEEee
Q psy11143 300 CVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEAEFVEDR--NHKIHR 373 (940)
Q Consensus 300 C~A~N~~Gs~~~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~~i~~~~--~~~i~~ 373 (940)
|.|.|..+.......+.+ ....+|.+.+.+.......|+.++|.|.+.| .|.+ .|+|+|+|..+.... ......
T Consensus 99 C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 178 (239)
T 1i1c_A 99 CKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDT 178 (239)
T ss_dssp EEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECT
T ss_pred EEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECC
Confidence 999999886544333322 3456787776655433345889999999998 4553 899999998774321 111122
Q ss_pred ece------EEEecCCCCCCeEEEEEEEeCCee
Q psy11143 374 TGS------LRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 374 ~~s------L~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
+++ |.|.....+|.|.|+|.|.|..-.
T Consensus 179 dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 179 DGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp TSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 333 444444445799999999997643
No 361
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.54 E-value=6.7e-15 Score=156.49 Aligned_cols=192 Identities=16% Similarity=0.263 Sum_probs=110.8
Q ss_pred ceEEEEEEcCCcceeeeeeeeecCCCCeeeeCCCeeE-EecCCeEEEEEEEeeeC----CCeEEEEECCeecCCCCce--
Q psy11143 204 GLYRCTASNLLGEDVAEGYLTVTGAPPIFIQRPVSTT-YSTGSTSRITCLVEGHP----LPQMTWFHDGNSLDSDDHV-- 276 (940)
Q Consensus 204 G~YtC~a~N~~g~~s~s~~L~V~~~~p~~~~~p~~~~-v~~G~~v~L~C~v~G~P----~p~ItW~k~g~~l~~~~~~-- 276 (940)
|.|.|..++..+. ...... ...|..++..|.... +..|+.++|.|.+.|.+ ...|+|+++|..+......
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~-~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPEL-LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp -------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC--CCcccc-CCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 7899999987664 111111 113444455555555 55799999999999964 2389999999988543111
Q ss_pred EEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEE--EeeccCCeEEEcCCceeecCCCeEEEEEeecC-
Q psy11143 277 TYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIR--INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG- 348 (940)
Q Consensus 277 ~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~--V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g- 348 (940)
....++ +.|.|.....+|.|.|+|.|.|..+.......+. +....+|.+.+.+.......|+.++|.|.+.|
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf 157 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGF 157 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEE
Confidence 011122 2377777777789999999999887543333332 33456788777665443345899999999998
Q ss_pred cCCC-eEEEEeCCeeeccCC--cE------EEeeeceEEEecCCCCCCeEEEEEEEeCC
Q psy11143 349 EPLP-RISWSKDEAEFVEDR--NH------KIHRTGSLRLYNIGPQDSGLYRCTASNLL 398 (940)
Q Consensus 349 ~P~p-~i~W~k~g~~i~~~~--~~------~i~~~~sL~I~~v~~~D~G~YtC~A~N~~ 398 (940)
+|.+ .|.|+|+|..+.... .. .....+.|.|......+.|.|+|.|.|..
T Consensus 158 ~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 158 YPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred eCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 5665 899999998764211 11 11123356666665567899999999964
No 362
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.54 E-value=6.3e-13 Score=139.45 Aligned_cols=242 Identities=14% Similarity=0.190 Sum_probs=169.8
Q ss_pred CeeEecCCceeecCCCcEEEEEEeC-CCC---CCeEEEeeCCeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCC
Q psy11143 139 PRLVVKPFDMRAPAGSSVEIPCKPD-GEP---LPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 139 P~~~~~p~~~~v~~Ge~vtL~C~v~-g~P---~p~ItW~k~g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
+.+.+.|....+..|+.++|+|.+. |.| ...++|+|++..+... .+.|.+..+...++|.|+|.+.+..
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-------T~tLti~s~t~sdSG~YqCvVTDa~ 75 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-------TATLTVADATSENAGSYKVTVQDTD 75 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEEEETT
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-------cceEEeeeccccCCeEEEEEEEECC
Confidence 3456677778899999999999987 456 3479999999876542 3478888999999999999999988
Q ss_pred cceeeeeeeeecCCCC-eee-eCCCeeEEecCCeEEEEEEE--ee-eC-----CCeEEEEECCeecCCCCceEEeecCeE
Q psy11143 215 GEDVAEGYLTVTGAPP-IFI-QRPVSTTYSTGSTSRITCLV--EG-HP-----LPQMTWFHDGNSLDSDDHVTYEHDGFV 284 (940)
Q Consensus 215 g~~s~s~~L~V~~~~p-~~~-~~p~~~~v~~G~~v~L~C~v--~G-~P-----~p~ItW~k~g~~l~~~~~~~~~~~g~s 284 (940)
|....+..+.|..... .+. ..|....+..|..+.|.+.+ .| .| ..++.|+|++..+... ..
T Consensus 76 Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA---------q~ 146 (304)
T 3shs_A 76 TMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT---------QD 146 (304)
T ss_dssp TCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS---------SE
T ss_pred CCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc---------cc
Confidence 8765555555553222 222 23555666678899999987 43 44 4599999999876432 23
Q ss_pred EEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeec--------CcCCC--eE
Q psy11143 285 LVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPD--------GEPLP--RI 354 (940)
Q Consensus 285 L~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~--------g~P~p--~i 354 (940)
|++......++|.|+|.+.|..+....+..+.|...-.+.-........+..|+.+.|...+. |.|.. .+
T Consensus 147 lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (304)
T 3shs_A 147 ITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKY 226 (304)
T ss_dssp EEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEE
T ss_pred cceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEE
Confidence 777788889999999999999886666555555432222212222345678899999887653 34443 56
Q ss_pred EEEe--CCe----eecc-----CCcEEEeeeceEEEecCCCCCCeEEEEEEEe
Q psy11143 355 SWSK--DEA----EFVE-----DRNHKIHRTGSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 355 ~W~k--~g~----~i~~-----~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N 396 (940)
.|+. +|. .|.. -..+.+..++.|.-....-+|...|.|.|.-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 227 NWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKL 279 (304)
T ss_dssp EEEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHHH
Confidence 7874 332 1111 1356677788888888899999999999864
No 363
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.54 E-value=1.4e-14 Score=153.75 Aligned_cols=170 Identities=18% Similarity=0.249 Sum_probs=113.0
Q ss_pred eEEeCCCcEE-EecCCeEEEEEEeecc---CCC-eEEEEECCEeecCCCC---eEEE----eeceEEEEcccccCCCeEE
Q psy11143 47 IFIQRPVSTT-YSTGSTSRITCLVEGH---PLP-QMTWFHDGNSLDSDDH---VTYE----HDGFVLVLNGVRESDAGVY 114 (940)
Q Consensus 47 ~~~~~p~~~~-V~eGesv~L~C~v~g~---P~p-~V~W~kdg~~I~~~~~---~~~~----~~gs~L~I~~v~~~DsG~Y 114 (940)
.+...|.... +.+|+.++|.|.+.+. |.+ .|+|+|++..+..... .+.. .....|.|.+++.+|+|.|
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y 97 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTF 97 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeE
Confidence 3334444444 7899999999999886 766 9999999877643210 0100 1223589999999999999
Q ss_pred EEEEEeCCCceEEEEEEEE--ecccCCeeEecCCceeecCCCcEEEEEEeCC-CCC-CeEEEeeCCeeccccCc--eEEe
Q psy11143 115 NCVAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPL-PRISWSKDEAEFVEDRN--HKIH 188 (940)
Q Consensus 115 tC~a~n~~g~~~~~~~L~V--~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~-p~ItW~k~g~~i~~~~~--~~~~ 188 (940)
+|.+.|..+.......+.+ ....+|.+.+.+.......|+.++|.|.+.| .|. ..|+|+++|..+..... ....
T Consensus 98 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 177 (239)
T 1i1c_A 98 KCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMD 177 (239)
T ss_dssp EEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEEC
T ss_pred EEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceEC
Confidence 9999998886533333322 2334566665554443445889999999998 555 48999999987753211 1112
Q ss_pred eec------eEEEeecccCCCceEEEEEEcCCcc
Q psy11143 189 RTG------SLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 189 ~~~------sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
.++ .|.|......|.|.|+|.|.|....
T Consensus 178 ~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 178 TDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp TTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 222 3445544455799999999997644
No 364
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.54 E-value=4.1e-14 Score=152.19 Aligned_cols=167 Identities=18% Similarity=0.274 Sum_probs=116.0
Q ss_pred CCCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eec------C-----------CCCceEEeec----CeEEEEee
Q psy11143 235 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL------D-----------SDDHVTYEHD----GFVLVLNG 289 (940)
Q Consensus 235 ~p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l------~-----------~~~~~~~~~~----g~sL~I~~ 289 (940)
.+....+.+|++++|.|.+.+.| .+.|.|+|+. ..+ . ...++.+..+ ..+|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 35567889999999999999876 6799999863 211 0 1235555432 34699999
Q ss_pred eccCCCeEEEEEEEeCCCCc---eeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCee
Q psy11143 290 VRESDAGVYNCVAQNSEGSA---ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAE 362 (940)
Q Consensus 290 v~~~DsG~YtC~A~N~~Gs~---~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~ 362 (940)
++.+|+|.|.|.+.|..+.. ...+.|.|.. ..+|.+...+....+..|+.++|.|.+.+. |.| .|.|++++..
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~ 171 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 171 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCc
Confidence 99999999999999864311 1234666653 235666543433346789999999999985 777 9999999865
Q ss_pred eccC--Cc----EEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEE
Q psy11143 363 FVED--RN----HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 363 i~~~--~~----~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~ 402 (940)
+... .. -.....+.|.|..+..+| |.|+|.|.|......
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~ 216 (261)
T 2xqy_G 172 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 216 (261)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred CceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc
Confidence 4211 11 112234579999988888 999999999766544
No 365
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.54 E-value=2.8e-14 Score=154.50 Aligned_cols=174 Identities=17% Similarity=0.270 Sum_probs=119.0
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Ee---e----------c----CCCCeEEEe---eceEEE
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NS---L----------D----SDDHVTYEH---DGFVLV 102 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~---I----------~----~~~~~~~~~---~gs~L~ 102 (940)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++ .. + . ...++.+.. ....|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 345666788899999999999999988888899999864 11 0 0 122444432 234689
Q ss_pred EcccccCCCeEEEEEEEeCCC----ce--EEEEEEEEecc----cCCeeEec-CCceeecCCCcEEEEEEeCCC-CC-Ce
Q psy11143 103 LNGVRESDAGVYNCVAQNSEG----SA--ESVAMIRINGH----RAPRLVVK-PFDMRAPAGSSVEIPCKPDGE-PL-PR 169 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g----~~--~~~~~L~V~~~----~~P~~~~~-p~~~~v~~Ge~vtL~C~v~g~-P~-p~ 169 (940)
|.+++.+|+|.|+|.+.+..+ .. ...+.|.|... .+|.+.+. +....+.+|+.++|.|.+.+. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998432 11 12345666642 24555443 334455679999999999985 54 69
Q ss_pred EEEeeCCeeccccCc--------------eEEeeeceEEEeecccCC-CceEEEEEEcCCccee
Q psy11143 170 ISWSKDEAEFVEDRN--------------HKIHRTGSLRLYNIGPQD-SGLYRCTASNLLGEDV 218 (940)
Q Consensus 170 ItW~k~g~~i~~~~~--------------~~~~~~~sL~I~~v~~~D-sG~YtC~a~N~~g~~s 218 (940)
|+|++++..+..... ..+.....|.|.+....| .|.|+|.|.|......
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 999999987754311 112223357777777665 6789999999765443
No 366
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.54 E-value=3.6e-14 Score=151.45 Aligned_cols=173 Identities=19% Similarity=0.277 Sum_probs=113.6
Q ss_pred cCCceeecCCCcEEEEEEeCCC--CCCeEEEeeCC--eec--c---------------ccCceEEeee-----ceEEEee
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKDE--AEF--V---------------EDRNHKIHRT-----GSLRLYN 197 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~--P~p~ItW~k~g--~~i--~---------------~~~~~~~~~~-----~sL~I~~ 197 (940)
.+..+.+.+|++++|.|.+.+. +...+.|++.. ... . ...++.+..+ .+|.|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3456788999999999999763 35689999832 110 0 1134444432 2499999
Q ss_pred cccCCCceEEEEEEcCC----cceeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEee-eCCC-eEEEEECCe
Q psy11143 198 IGPQDSGLYRCTASNLL----GEDVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEG-HPLP-QMTWFHDGN 268 (940)
Q Consensus 198 v~~~DsG~YtC~a~N~~----g~~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G-~P~p-~ItW~k~g~ 268 (940)
++.+|+|.|.|.+.+.. ........|.|.. .+|.+...+....+..|+.++|.|.+.| +|.+ .++|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 99999999999998752 2223334566652 3455544444455668999999999998 6767 899999987
Q ss_pred ecCCCC--c----eEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy11143 269 SLDSDD--H----VTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 318 (940)
Q Consensus 269 ~l~~~~--~----~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V~ 318 (940)
.+.... . -.+... ..|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 166 ~~~~~~~~~~~~~g~~~~~-s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 166 SSGVHTFPAVLQSDLYTLS-SSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CTTEEECCCEEETTEEEEE-EEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ecceEeCCccccCCeEEEE-EEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 432110 0 011111 348899998889 99999999998877666555543
No 367
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.54 E-value=1.7e-13 Score=142.60 Aligned_cols=162 Identities=20% Similarity=0.342 Sum_probs=111.9
Q ss_pred cCCceeecCCCcEEEEEEeCCCC--CCeEEEeeCC--eecc-------------------ccCceEEeeec-----eEEE
Q psy11143 144 KPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKDE--AEFV-------------------EDRNHKIHRTG-----SLRL 195 (940)
Q Consensus 144 ~p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~g--~~i~-------------------~~~~~~~~~~~-----sL~I 195 (940)
.+....+.+|++++|.|.+.+.+ .+.+.|++.. .... ...++.+..+. +|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 34567789999999999998743 5789999732 1110 12344444332 5999
Q ss_pred eecccCCCceEEEEEEcCC--cceeeeeeeeecC---CCCeee-eCCCeeEEecCCeEEEEEEEee-eCC-C-eEEEEEC
Q psy11143 196 YNIGPQDSGLYRCTASNLL--GEDVAEGYLTVTG---APPIFI-QRPVSTTYSTGSTSRITCLVEG-HPL-P-QMTWFHD 266 (940)
Q Consensus 196 ~~v~~~DsG~YtC~a~N~~--g~~s~s~~L~V~~---~~p~~~-~~p~~~~v~~G~~v~L~C~v~G-~P~-p-~ItW~k~ 266 (940)
.+++.+|+|.|.|.+.+.. ........|.|.. .+|.+. ..+... .+|+.++|.|.+.+ .|. + .++|+++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~ 163 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSES 163 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEEC
Confidence 9999999999999999863 1223334566642 234443 223322 68999999999998 676 4 9999999
Q ss_pred CeecC----------CCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 267 GNSLD----------SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 267 g~~l~----------~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
|..+. .+..+... ..|.|.....+|+|.|+|.|.|..+...
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~---s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 164 GQGVTARNFPPSQDASGDLYTTS---SQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp STTCEEEECCCEECSSSSCEEEE---EEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred CEECceEEcCceeeCCCCcEEEE---EEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 87763 12222211 2488999999999999999999876543
No 368
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.54 E-value=5.5e-14 Score=152.54 Aligned_cols=162 Identities=17% Similarity=0.296 Sum_probs=111.1
Q ss_pred CCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--Eeec-----------------CCCCeEEEeec----eEEEEccc
Q psy11143 52 PVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NSLD-----------------SDDHVTYEHDG----FVLVLNGV 106 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~~I~-----------------~~~~~~~~~~g----s~L~I~~v 106 (940)
|..+.+.+|++|+|.|.+.+. +.+.+.|||.. .... ...++.+..+. ..|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 778889999999999999875 56799999742 1100 01234443222 46899999
Q ss_pred ccCCCeEEEEEEEeCC-------Cc--eEEEEEEEEec-------------ccCCeeEecCCceeecCCCcEEEEEEeCC
Q psy11143 107 RESDAGVYNCVAQNSE-------GS--AESVAMIRING-------------HRAPRLVVKPFDMRAPAGSSVEIPCKPDG 164 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~-------g~--~~~~~~L~V~~-------------~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g 164 (940)
+.+|+|.|.|.+.+.. .. ....+.|.|.. ...+.+...+. ..+.+|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 9999999999999861 11 11244566654 12334444444 88999999999999998
Q ss_pred -CC-CCeEEEeeC--Ceecc------------ccCceEEeee---ceEEEeecccCCCceEEEEEEcCC
Q psy11143 165 -EP-LPRISWSKD--EAEFV------------EDRNHKIHRT---GSLRLYNIGPQDSGLYRCTASNLL 214 (940)
Q Consensus 165 -~P-~p~ItW~k~--g~~i~------------~~~~~~~~~~---~sL~I~~v~~~DsG~YtC~a~N~~ 214 (940)
.+ .+.+.|++. +..+. ...++..... .+|.|.+++.+|+|.|+|.+.+..
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 44 478999882 22221 0233333322 259999999999999999999865
No 369
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.54 E-value=2.5e-14 Score=148.25 Aligned_cols=171 Identities=15% Similarity=0.202 Sum_probs=108.5
Q ss_pred ecCCceeecCCCcEEEEEEeCCC--CCCeEEEeeCC--eecc----------------ccCceEEeee---ceEEEeecc
Q psy11143 143 VKPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKDE--AEFV----------------EDRNHKIHRT---GSLRLYNIG 199 (940)
Q Consensus 143 ~~p~~~~v~~Ge~vtL~C~v~g~--P~p~ItW~k~g--~~i~----------------~~~~~~~~~~---~sL~I~~v~ 199 (940)
..+....+.+|++++|.|.+.+. +.+.+.|++.. .... ...++.+... .+|.|.+++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 34556789999999999999763 46789998732 1110 1233333322 259999999
Q ss_pred cCCCceEEEEEEcCCcc----eeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEeeeCCC--eEEEEECCeec
Q psy11143 200 PQDSGLYRCTASNLLGE----DVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEGHPLP--QMTWFHDGNSL 270 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g~----~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p--~ItW~k~g~~l 270 (940)
.+|+|.|.|.+.+..+. ......|.|.. .+|.+...+....+..|+.++|.|.+.+.+++ .+.|++++..+
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 163 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTN 163 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEEC
Confidence 99999999999987542 23344566652 34444433444456689999999999996543 67899998765
Q ss_pred CCCCce-EEeecCeEEEE---eeeccCCCeEEEEEEEeCCCCceeEEEE
Q psy11143 271 DSDDHV-TYEHDGFVLVL---NGVRESDAGVYNCVAQNSEGSAESVAMI 315 (940)
Q Consensus 271 ~~~~~~-~~~~~g~sL~I---~~v~~~DsG~YtC~A~N~~Gs~~~s~~l 315 (940)
...... ....++. +.+ ..+...| |.|+|.|.|..+.......+
T Consensus 164 ~~~~~~~~~~~~g~-~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 164 GVRTFPSVRQSSGL-YSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp TEEECCCEECTTSC-EEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred CeEecCceECCCCC-EEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 422211 1222332 444 4566777 99999999998876555443
No 370
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.53 E-value=6.6e-14 Score=148.25 Aligned_cols=176 Identities=15% Similarity=0.224 Sum_probs=118.1
Q ss_pred eeEecCCceeecCCCcEEEEEEeCCC--CCCeEEEeeCC--eec---c--------------ccCceEEee-----eceE
Q psy11143 140 RLVVKPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKDE--AEF---V--------------EDRNHKIHR-----TGSL 193 (940)
Q Consensus 140 ~~~~~p~~~~v~~Ge~vtL~C~v~g~--P~p~ItW~k~g--~~i---~--------------~~~~~~~~~-----~~sL 193 (940)
.+...|..+.+.+|++++|.|.+.+. +.+.+.|+|.. ..+ . ...++.+.. ..+|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 34455677889999999999999875 66799999842 211 0 123444432 3479
Q ss_pred EEeecccCCCceEEEEEEcCCc-----c--eeeeeeeeecCC------CCeeee-CCCeeEEecCCeEEEEEEEeee-CC
Q psy11143 194 RLYNIGPQDSGLYRCTASNLLG-----E--DVAEGYLTVTGA------PPIFIQ-RPVSTTYSTGSTSRITCLVEGH-PL 258 (940)
Q Consensus 194 ~I~~v~~~DsG~YtC~a~N~~g-----~--~s~s~~L~V~~~------~p~~~~-~p~~~~v~~G~~v~L~C~v~G~-P~ 258 (940)
.|.+++.+|+|.|.|.+.+... . ......|.|... +|...+ .+....+..|+.++|.|.+.|. |.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 9999999999999999987531 1 123456777642 232222 2333445679999999999986 64
Q ss_pred -CeEEEEECCe-ecCCCCc-eEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEE
Q psy11143 259 -PQMTWFHDGN-SLDSDDH-VTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 259 -p~ItW~k~g~-~l~~~~~-~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V 317 (940)
+.|+|++++. .+..... .....++ ..|.|..+.. + |.|+|.|.|..+.......+.+
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 6999999987 5643210 0111222 2478877665 4 9999999999988766555554
No 371
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.53 E-value=6.4e-14 Score=151.67 Aligned_cols=171 Identities=18% Similarity=0.275 Sum_probs=118.5
Q ss_pred CeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec--------------C---CCCceEEeec---CeEEEE
Q psy11143 230 PIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL--------------D---SDDHVTYEHD---GFVLVL 287 (940)
Q Consensus 230 p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l--------------~---~~~~~~~~~~---g~sL~I 287 (940)
+.+...+....+.+|++++|.|.+.+.|.+.+.|+|++ ... . ...++.+..+ ..+|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 34555677888999999999999988888899999863 111 0 1235555432 236999
Q ss_pred eeeccCCCeEEEEEEEeCCCC------ceeEEEEEEee----ccCCeEEEc-CCceeecCCCeEEEEEeecCc-CC-CeE
Q psy11143 288 NGVRESDAGVYNCVAQNSEGS------AESVAMIRING----HRAPRLVVK-PFDMRAPAGSSVEIPCKPDGE-PL-PRI 354 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~Gs------~~~s~~l~V~~----~~~P~i~~~-p~~~~v~~G~~vtL~C~v~g~-P~-p~i 354 (940)
.+++.+|+|.|+|.+.|..+. ......|.|.. ..+|.+... +....+.+|+.++|.|.+.|. |. +.|
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 184 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 184 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEE
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEE
Confidence 999999999999999995321 11234566654 246766543 344455679999999999987 54 699
Q ss_pred EEEeCCeeeccCCcE--------------EEeeeceEEEecCCCC-CCeEEEEEEEeCCee
Q psy11143 355 SWSKDEAEFVEDRNH--------------KIHRTGSLRLYNIGPQ-DSGLYRCTASNLLGE 400 (940)
Q Consensus 355 ~W~k~g~~i~~~~~~--------------~i~~~~sL~I~~v~~~-D~G~YtC~A~N~~G~ 400 (940)
+|+++|..+...... .....+.|.|...... +.|.|+|.|.|....
T Consensus 185 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 185 SWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 999999877543211 1112235777777665 478899999997654
No 372
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.53 E-value=4.5e-14 Score=146.65 Aligned_cols=167 Identities=16% Similarity=0.298 Sum_probs=112.1
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eecC----------------CCCceEEeec----CeEEEEeeec
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD----------------SDDHVTYEHD----GFVLVLNGVR 291 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l~----------------~~~~~~~~~~----g~sL~I~~v~ 291 (940)
|....+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...++.+..+ ..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4556788999999999998865 4789999862 2110 1234554432 2369999999
Q ss_pred cCCCeEEEEEEEeCCCC---ceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCeeec
Q psy11143 292 ESDAGVYNCVAQNSEGS---AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEFV 364 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs---~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~~i~ 364 (940)
.+|+|.|.|.+.|..+. ....+.|.|.. ..+|.+...+....+..|+.++|.|.+.|. |.| .|.|++++..+.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCS
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCc
Confidence 99999999999987532 12235667753 235666554433446789999999999987 888 999999886542
Q ss_pred cCC-cEEE-----eeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEE
Q psy11143 365 EDR-NHKI-----HRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 405 (940)
Q Consensus 365 ~~~-~~~i-----~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~ 405 (940)
... .... ...+.|. ....+| |.|+|.|.|..|......
T Consensus 167 ~~~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 167 VHTFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp CCBCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eEecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEE
Confidence 111 1111 1112233 344356 999999999998765443
No 373
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.52 E-value=7.6e-14 Score=144.90 Aligned_cols=168 Identities=16% Similarity=0.279 Sum_probs=110.7
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Eee----c------------CCCCeEEEee----ceEEEEccc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSL----D------------SDDHVTYEHD----GFVLVLNGV 106 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~I----~------------~~~~~~~~~~----gs~L~I~~v 106 (940)
+|..+.+.+|++++|.|.+.+.+ .+.|.|+|+. ..+ . ...++.+..+ ...|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 35667899999999999998764 4789999863 211 0 1123343321 246899999
Q ss_pred ccCCCeEEEEEEEeCCCc---eEEEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCCeec
Q psy11143 107 RESDAGVYNCVAQNSEGS---AESVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEAEF 179 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g~---~~~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g~~i 179 (940)
+.+|+|.|.|.+.+..+. ....+.|.|... ..|.+...+....+.+|+.++|.|.+.+. |.+ .|+|++++..+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 999999999999986422 112356777632 23555544434456789999999999985 877 99999987654
Q ss_pred cccCc-eE-----EeeeceEEEeecccCCCceEEEEEEcCCcceeeee
Q psy11143 180 VEDRN-HK-----IHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEG 221 (940)
Q Consensus 180 ~~~~~-~~-----~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~ 221 (940)
..... .. +.....|. ....+| |.|+|.|.|..+......
T Consensus 166 ~~~~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 166 DVHTFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp SCCBCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ceEecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEE
Confidence 21111 11 11111233 444455 999999999887755443
No 374
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.51 E-value=4.7e-14 Score=151.47 Aligned_cols=167 Identities=14% Similarity=0.302 Sum_probs=99.8
Q ss_pred CCCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--Ee---e---c-----------CCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NS---L---D-----------SDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~~---I---~-----------~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++|+|.|.+.+.+ .+.|.|||.. .. + . ...++.+..+ ...|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 6 QSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp EECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred ccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 34567899999999999998865 5789999853 11 1 0 1234444432 34689999
Q ss_pred cccCCCeEEEEEEEeCCCc---------e--E--EEEEEEEecc--cCCeeEecCCceeecCCCcEEEEEEeCCC-CCC-
Q psy11143 106 VRESDAGVYNCVAQNSEGS---------A--E--SVAMIRINGH--RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP- 168 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~g~---------~--~--~~~~L~V~~~--~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~p- 168 (940)
++.+|+|.|.|.+.+..|. . . ..+.|.|... .+|.+........+.+|+.++|.|.+.+. |.+
T Consensus 86 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi 165 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 165 (257)
T ss_dssp CCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCC
T ss_pred CChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCc
Confidence 9999999999999987651 1 1 1346777642 23555443333346789999999999984 777
Q ss_pred eEEEeeCCeecccc-------CceEEeeeceEEEeecccCCCceEEEEEEcCCccee
Q psy11143 169 RISWSKDEAEFVED-------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 169 ~ItW~k~g~~i~~~-------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
.|+|++++..+... ....+...+.|.|.++...| |.|+|.|.|......
T Consensus 166 ~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 166 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp EEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred EEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 99999988753211 00111223457888887777 999999999655443
No 375
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.51 E-value=6.5e-14 Score=129.46 Aligned_cols=92 Identities=30% Similarity=0.648 Sum_probs=82.7
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.||.|...|.++.+.+|+.+.|.|.+.|.|.|+|+|+|+|..|..+.++++..++ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 3789999999999999999999999999999999999999999888777766443 46899999999999999999999
Q ss_pred CCceEEEEEEEEec
Q psy11143 122 EGSAESVAMIRING 135 (940)
Q Consensus 122 ~g~~~~~~~L~V~~ 135 (940)
.|.....+.|.|..
T Consensus 92 ~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 92 AGEAYAAAAVTVLE 105 (107)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEc
Confidence 99988888888865
No 376
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.51 E-value=9.1e-14 Score=166.22 Aligned_cols=162 Identities=20% Similarity=0.309 Sum_probs=117.4
Q ss_pred CcEEEecCCeEEEEEEe-eccCCCeEEEEECCEeecC------------CCCeEEEeeceEEEEcccccCCCeEEEEEEE
Q psy11143 53 VSTTYSTGSTSRITCLV-EGHPLPQMTWFHDGNSLDS------------DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 53 ~~~~V~eGesv~L~C~v-~g~P~p~V~W~kdg~~I~~------------~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~ 119 (940)
....+.+|++++|.|.+ .+.|.+.|+|+|++..+.. ..+..+..++ .|.|.+++.+|+|.|+|.+.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG-SLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS-CEEESSCCGGGCEEEEEEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc-eEEEeccccccCeEEEEEEE
Confidence 45678999999999999 7889999999998763211 1233333444 57999999999999999999
Q ss_pred eCCCce-EEEEEEEEecccCCeeEecCCceeecCCCc-EEEEEEeCC-CCCCeEEEeeCCeeccccCce-EE--------
Q psy11143 120 NSEGSA-ESVAMIRINGHRAPRLVVKPFDMRAPAGSS-VEIPCKPDG-EPLPRISWSKDEAEFVEDRNH-KI-------- 187 (940)
Q Consensus 120 n~~g~~-~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge~-vtL~C~v~g-~P~p~ItW~k~g~~i~~~~~~-~~-------- 187 (940)
|..+.. ...+.|.|...+.+.....+.. .+.+|+. +.|.|.+.+ +|.+.|+|++++..+...... .+
T Consensus 453 n~~~~~~~~~~~l~V~~~~~~p~i~~~~~-~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIPGKPEIVDSAS-ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCCCCCEEESCCS-EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred cCCCceeEEEEEEEEEcCCCCCEEEcCCc-ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 999887 5578888876544333333333 3555555 567999998 699999999999887643221 11
Q ss_pred -----eeeceEEEeecccC-CCceEEEEEEcCCcc
Q psy11143 188 -----HRTGSLRLYNIGPQ-DSGLYRCTASNLLGE 216 (940)
Q Consensus 188 -----~~~~sL~I~~v~~~-DsG~YtC~a~N~~g~ 216 (940)
...++|.|.+++.+ +.|.|+|.|+|..+.
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 12246999998844 488999999998654
No 377
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.50 E-value=9.4e-14 Score=166.08 Aligned_cols=165 Identities=23% Similarity=0.400 Sum_probs=121.6
Q ss_pred ceeecCCCcEEEEEEe-CCCCCCeEEEeeCCeecc------------ccCceEEeeeceEEEeecccCCCceEEEEEEcC
Q psy11143 147 DMRAPAGSSVEIPCKP-DGEPLPRISWSKDEAEFV------------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNL 213 (940)
Q Consensus 147 ~~~v~~Ge~vtL~C~v-~g~P~p~ItW~k~g~~i~------------~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~ 213 (940)
...+.+|++++|.|.+ .+.|.+.|+|++++..+. ...+..+..+++|.|.+++.+|+|.|+|.+.|.
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~ 454 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNR 454 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECT
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcC
Confidence 4678899999999999 788999999999765221 123445556678999999999999999999999
Q ss_pred Ccce-eeeeeeeecCCCCeeeeCCCeeEEecCCe-EEEEEEEee-eCCCeEEEEECCeecCCCCc-eEEe-------ecC
Q psy11143 214 LGED-VAEGYLTVTGAPPIFIQRPVSTTYSTGST-SRITCLVEG-HPLPQMTWFHDGNSLDSDDH-VTYE-------HDG 282 (940)
Q Consensus 214 ~g~~-s~s~~L~V~~~~p~~~~~p~~~~v~~G~~-v~L~C~v~G-~P~p~ItW~k~g~~l~~~~~-~~~~-------~~g 282 (940)
.+.. ...+.|.|...+....+.+....+..|.. +.|.|.+.+ +|.|.|+|+++|..+..... ..+. ..|
T Consensus 455 ~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g 534 (581)
T 3o3u_N 455 NGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETG 534 (581)
T ss_dssp TSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTC
T ss_pred CCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCc
Confidence 8886 67788888754433333333334555555 467999998 69999999999999875432 2221 111
Q ss_pred -----eEEEEeeec-cCCCeEEEEEEEeCCCCcee
Q psy11143 283 -----FVLVLNGVR-ESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 283 -----~sL~I~~v~-~~DsG~YtC~A~N~~Gs~~~ 311 (940)
++|.|..++ .++.|.|+|.|+|..+....
T Consensus 535 ~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~~~ 569 (581)
T 3o3u_N 535 LFTLQSELMVTPARGGDPRPTFSCSFSPGLPRHRA 569 (581)
T ss_dssp CEEEEEEEEECCCTTSCSCCCEEEEEECSSCSSCC
T ss_pred eEEEEEEEEEEeccccCCCceEEEEEeccCCCCCc
Confidence 348898888 55588999999999765443
No 378
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.50 E-value=9.9e-14 Score=126.50 Aligned_cols=91 Identities=25% Similarity=0.503 Sum_probs=80.5
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCC--cEEEeee---ceEEEecCCCCCCeEEEEEEE
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR--NHKIHRT---GSLRLYNIGPQDSGLYRCTAS 395 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~--~~~i~~~---~sL~I~~v~~~D~G~YtC~A~ 395 (940)
.||.|...|.++.+.+|++++|.|.+.|.|.|.|+|+|+|..+.... ++.+... .+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 47888888888999999999999999999999999999999886543 5555443 379999999999999999999
Q ss_pred eCCeeEEEEEEEEEec
Q psy11143 396 NLLGEDVAEGYLTVTG 411 (940)
Q Consensus 396 N~~G~~~~s~~L~V~~ 411 (940)
|..|..+.++.|.|++
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 9999999999999974
No 379
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.49 E-value=4.6e-14 Score=151.56 Aligned_cols=164 Identities=15% Similarity=0.310 Sum_probs=100.5
Q ss_pred CCeeEEecCCeEEEEEEEeeeC--CCeEEEEECC--eecC-----------------CCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--NSLD-----------------SDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~g--~~l~-----------------~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+. ...++.+..+ ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 3456788999999999999875 6789999853 1110 1235555432 246999999
Q ss_pred ccCCCeEEEEEEEeCCCC---------c----eeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-e
Q psy11143 291 RESDAGVYNCVAQNSEGS---------A----ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-R 353 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~Gs---------~----~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~ 353 (940)
+.+|+|.|.|.+.|..|. . .....|.|.. ..+|.+...+....+..|+.++|.|.+.|. |.| .
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~ 166 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 166 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCE
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcE
Confidence 999999999999997651 1 1234666653 235666543333346789999999999986 887 9
Q ss_pred EEEEeCCeeec---------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEE
Q psy11143 354 ISWSKDEAEFV---------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 354 i~W~k~g~~i~---------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~ 402 (940)
|.|++++..+. .++.+. ..+.|.|..+..+| |.|+|.|.|......
T Consensus 167 v~W~k~g~~~~~~~~~~~~~~~g~y~--~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 167 VSWNSGALTSGVHTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp EEETTTTCCSSCEECCCEECTTSCEE--EEEECCCC--------CEEEEEEEGGGTEE
T ss_pred EEEeeCCCcCCcEecCCeEcCCCCEE--EEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 99999987532 111221 23467888887777 999999999765433
No 380
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=3.7e-13 Score=125.09 Aligned_cols=98 Identities=24% Similarity=0.334 Sum_probs=86.8
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee---eceEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.|...+.++.+.+|++++|.|.+.|.|.|.|.|+|++..+....++.+.. .++|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 57888888888999999999999999999999999999999988777777654 458999999999999999999999
Q ss_pred CeeEEEEEEEEEecCCCCCCC
Q psy11143 398 LGEDVAEGYLTVTGENSVEPA 418 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~~~~~~~ 418 (940)
.|.....+.|.|...|..+..
T Consensus 86 ~g~~~~~~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPDPPAG 106 (114)
T ss_dssp SCEEECCEEEEEECSCSCCCC
T ss_pred CCcEEEEEEEEEECCCCCCCC
Confidence 999999999999987664333
No 381
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.47 E-value=1.3e-13 Score=125.64 Aligned_cols=91 Identities=26% Similarity=0.512 Sum_probs=78.7
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCC--eEEEe--eceEEEEcccccCCCeEEEEEEEe
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH--VTYEH--DGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~--~~~~~--~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
||.|...|.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..+..... +.+.. +...|.|.+++.+|+|.|+|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 67888889999999999999999999999999999999999976543 44443 335689999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy11143 121 SEGSAESVAMIRING 135 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~ 135 (940)
..|..+..+.|.|..
T Consensus 85 ~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 85 EFGSDSATVNIHIRS 99 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEEEEE
Confidence 999988888888753
No 382
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.47 E-value=2.5e-13 Score=144.77 Aligned_cols=171 Identities=14% Similarity=0.234 Sum_probs=114.8
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Ee---ec------------CCCCeEEEe---eceEEEEccc
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NS---LD------------SDDHVTYEH---DGFVLVLNGV 106 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~---I~------------~~~~~~~~~---~gs~L~I~~v 106 (940)
.+...|..+.+.+|++++|.|.+. .+.+.|.|+|+. .. +. ...++.+.. ....|.|.++
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 455667888999999999999985 457899999853 11 10 123344332 1245899999
Q ss_pred ccCCCeEEEEEEEeCC---CceEEEEEEEEec----ccCCeeEec-CCceeecCCCcEEEEEEeCCC-CCC-eEEEeeCC
Q psy11143 107 RESDAGVYNCVAQNSE---GSAESVAMIRING----HRAPRLVVK-PFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDE 176 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~---g~~~~~~~L~V~~----~~~P~~~~~-p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~g 176 (940)
+.+|+|.|.|.+.+.. ........|.|.. ..+|.+.+. +....+.+|+.++|.|.+.+. |.+ .|+|+++|
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 163 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 163 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 9999999999999862 1111234566654 134555543 444456679999999999984 654 99999999
Q ss_pred eeccccCc--------------eEEeeeceEEEeecccC-CCceEEEEEEcCCccee
Q psy11143 177 AEFVEDRN--------------HKIHRTGSLRLYNIGPQ-DSGLYRCTASNLLGEDV 218 (940)
Q Consensus 177 ~~i~~~~~--------------~~~~~~~sL~I~~v~~~-DsG~YtC~a~N~~g~~s 218 (940)
..+..... ..+.....|.|...... +.|.|+|.+.|......
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 164 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp EEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 87754321 11122234777776654 57789999999765543
No 383
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=145.48 Aligned_cols=165 Identities=16% Similarity=0.250 Sum_probs=111.9
Q ss_pred eCCCeeEEecCCeEEEEEEEeeeCCCeEEEEEC--Ceec------CC---------CC-ceEEeecCeE-EEEeeeccCC
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHD--GNSL------DS---------DD-HVTYEHDGFV-LVLNGVRESD 294 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~--g~~l------~~---------~~-~~~~~~~g~s-L~I~~v~~~D 294 (940)
..|....+.+|++++|.|.+.+.+.+.+.|+|. +... .. .. ++.+..++.. |.|.+++.+|
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~D 85 (253)
T 3to4_D 6 QNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQ 85 (253)
T ss_dssp EECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSS
T ss_pred eCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhh
Confidence 346678899999999999998888899999983 1110 00 01 3333322211 9999999999
Q ss_pred CeEEEEEEEeCCCC------ceeEEEEEEee----ccCCeEEEc-CCceeecCCCeEEEEEeecC-cCCC-eEEEEeCCe
Q psy11143 295 AGVYNCVAQNSEGS------AESVAMIRING----HRAPRLVVK-PFDMRAPAGSSVEIPCKPDG-EPLP-RISWSKDEA 361 (940)
Q Consensus 295 sG~YtC~A~N~~Gs------~~~s~~l~V~~----~~~P~i~~~-p~~~~v~~G~~vtL~C~v~g-~P~p-~i~W~k~g~ 361 (940)
+|.|.|.+.+..+. ......+.|.. ..+|.+... +....+..|+.++|.|.+.| .|.+ .++|+++|.
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~ 165 (253)
T 3to4_D 86 GRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 165 (253)
T ss_dssp CEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred CeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCE
Confidence 99999999976541 11223556642 245665543 33334446789999999998 6777 899999998
Q ss_pred eeccCCcE--------------EEeeeceEEEecCCCCC-CeEEEEEEEeCC
Q psy11143 362 EFVEDRNH--------------KIHRTGSLRLYNIGPQD-SGLYRCTASNLL 398 (940)
Q Consensus 362 ~i~~~~~~--------------~i~~~~sL~I~~v~~~D-~G~YtC~A~N~~ 398 (940)
.+...... .....+.|.|.....+| .|.|+|.|.|..
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 166 EVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred ECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 87542111 11223467888777777 779999999963
No 384
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.46 E-value=4.6e-13 Score=142.65 Aligned_cols=168 Identities=20% Similarity=0.278 Sum_probs=111.0
Q ss_pred EecCCceeecCCCcEEEEEEeCCCCCCeEEEeeC--Ceecc-----c----------cC-ceEEeeece--EEEeecccC
Q psy11143 142 VVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKD--EAEFV-----E----------DR-NHKIHRTGS--LRLYNIGPQ 201 (940)
Q Consensus 142 ~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~--g~~i~-----~----------~~-~~~~~~~~s--L~I~~v~~~ 201 (940)
...|..+.+.+|++++|.|.+.+.+.+.+.|+|. +.... . .. ++....... |.|.+++.+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~ 84 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMS 84 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCS
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChh
Confidence 3446678899999999999998888899999982 21110 0 01 333332222 999999999
Q ss_pred CCceEEEEEEcCCc------ceeeeeeeeecC-----CCCeeee-CCCeeEEecCCeEEEEEEEee-eCCC-eEEEEECC
Q psy11143 202 DSGLYRCTASNLLG------EDVAEGYLTVTG-----APPIFIQ-RPVSTTYSTGSTSRITCLVEG-HPLP-QMTWFHDG 267 (940)
Q Consensus 202 DsG~YtC~a~N~~g------~~s~s~~L~V~~-----~~p~~~~-~p~~~~v~~G~~v~L~C~v~G-~P~p-~ItW~k~g 267 (940)
|+|.|+|.+.+..+ .......|.|.. .+|.+.. .+....+..|+.++|.|.+.| +|.+ .++|+++|
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g 164 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 164 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECC
Confidence 99999999987543 112233555542 2333332 223333445789999999999 6666 89999999
Q ss_pred eecCCCCceEEe--------ecC-----eEEEEeeeccCC-CeEEEEEEEeCCCCc
Q psy11143 268 NSLDSDDHVTYE--------HDG-----FVLVLNGVRESD-AGVYNCVAQNSEGSA 309 (940)
Q Consensus 268 ~~l~~~~~~~~~--------~~g-----~sL~I~~v~~~D-sG~YtC~A~N~~Gs~ 309 (940)
..+......... .++ ..|.|.....+| .|.|+|.|.|.....
T Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~~ 220 (253)
T 3to4_D 165 KEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (253)
T ss_dssp EEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred EECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCCC
Confidence 988653221100 122 237777777777 779999999975443
No 385
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.45 E-value=6.3e-13 Score=141.58 Aligned_cols=168 Identities=15% Similarity=0.263 Sum_probs=114.8
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--ee---c------------CCCCceEEee---cCeEEEEeeec
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NS---L------------DSDDHVTYEH---DGFVLVLNGVR 291 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~---l------------~~~~~~~~~~---~g~sL~I~~v~ 291 (940)
+...|....+.+|++++|.|.+. .+.+.+.|+++. .. + ....++.+.. ...+|.|.+++
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 44557778899999999999985 457899999853 11 1 0124455442 12359999999
Q ss_pred cCCCeEEEEEEEeCCC---CceeEEEEEEee----ccCCeEEEc-CCceeecCCCeEEEEEeecCc-CCC-eEEEEeCCe
Q psy11143 292 ESDAGVYNCVAQNSEG---SAESVAMIRING----HRAPRLVVK-PFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDEA 361 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~G---s~~~s~~l~V~~----~~~P~i~~~-p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g~ 361 (940)
.+|+|.|.|.+.|..+ .......+.|.. ..+|.+... +....+..|+.++|.|.+.|. |.+ .|.|+|+|.
T Consensus 85 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~ 164 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 164 (252)
T ss_dssp SCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred hhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCE
Confidence 9999999999998621 111223466653 246776654 444455679999999999986 755 999999998
Q ss_pred eeccCCcE--------------EEeeeceEEEecCCCC-CCeEEEEEEEeCCee
Q psy11143 362 EFVEDRNH--------------KIHRTGSLRLYNIGPQ-DSGLYRCTASNLLGE 400 (940)
Q Consensus 362 ~i~~~~~~--------------~i~~~~sL~I~~v~~~-D~G~YtC~A~N~~G~ 400 (940)
.+...... .....+.|.|...... +.|.|+|.|.|....
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 165 EVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 77543211 1111234777766554 678999999997653
No 386
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.45 E-value=6.4e-13 Score=140.14 Aligned_cols=167 Identities=18% Similarity=0.302 Sum_probs=111.1
Q ss_pred EEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--Ee---e------------cCCCCeEEEe---eceEEEEcccc
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NS---L------------DSDDHVTYEH---DGFVLVLNGVR 107 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~---I------------~~~~~~~~~~---~gs~L~I~~v~ 107 (940)
+...|..+.+.+|+.|+|.|.+. .+.+.|.|+|++ .. + ....++.+.. ....|.|.+++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 34567788999999999999985 467899999863 11 1 0123344432 23468999999
Q ss_pred cCCCeEEEEEEEeCCC---ce--EEEEEEEEecc----cCCeeEe-cCCceeecCCCcEEEEEEeCCC-CCC-eEEEeeC
Q psy11143 108 ESDAGVYNCVAQNSEG---SA--ESVAMIRINGH----RAPRLVV-KPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKD 175 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g---~~--~~~~~L~V~~~----~~P~~~~-~p~~~~v~~Ge~vtL~C~v~g~-P~p-~ItW~k~ 175 (940)
.+|+|.|.|.+.+..+ .. .....|.|... .+|.+.+ .+....+.+|+.++|.|.+.|. |.+ .|+|+++
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 160 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 160 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEET
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEEC
Confidence 9999999999998742 11 12345667652 2455544 3444556789999999999985 655 9999999
Q ss_pred CeeccccCce----EEeeece------EEEeecccCC-CceEEEEEEcCCc
Q psy11143 176 EAEFVEDRNH----KIHRTGS------LRLYNIGPQD-SGLYRCTASNLLG 215 (940)
Q Consensus 176 g~~i~~~~~~----~~~~~~s------L~I~~v~~~D-sG~YtC~a~N~~g 215 (940)
|..+...... ....+++ |.|......| .|.|+|.|.|...
T Consensus 161 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 161 GKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred CEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 9887543211 1122233 4444444444 5789999999743
No 387
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.45 E-value=5.6e-13 Score=140.59 Aligned_cols=165 Identities=19% Similarity=0.307 Sum_probs=111.6
Q ss_pred eeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eec---------------CCCCceEEee---cCeEEEEeeecc
Q psy11143 233 IQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSL---------------DSDDHVTYEH---DGFVLVLNGVRE 292 (940)
Q Consensus 233 ~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l---------------~~~~~~~~~~---~g~sL~I~~v~~ 292 (940)
...|....+.+|++++|.|.+. .+.+.+.|+|++ ..+ ....++.+.. ...+|.|.+++.
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 3456778899999999999985 467899999863 111 0123444432 224699999999
Q ss_pred CCCeEEEEEEEeCCCC-----ceeEEEEEEeec----cCCeEEEc-CCceeecCCCeEEEEEeecCc-CCC-eEEEEeCC
Q psy11143 293 SDAGVYNCVAQNSEGS-----AESVAMIRINGH----RAPRLVVK-PFDMRAPAGSSVEIPCKPDGE-PLP-RISWSKDE 360 (940)
Q Consensus 293 ~DsG~YtC~A~N~~Gs-----~~~s~~l~V~~~----~~P~i~~~-p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k~g 360 (940)
+|+|.|.|.+.|..+. ......|.|... .+|.+... |....+..|+.++|.|.+.|. |.+ .|.|+++|
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 161 (238)
T 1bec_A 82 SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 161 (238)
T ss_dssp GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETT
T ss_pred ccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECC
Confidence 9999999999987531 112235666542 36766543 444556789999999999986 765 99999999
Q ss_pred eeeccCCcE----EEeeece------EEEecCCCCC-CeEEEEEEEeCC
Q psy11143 361 AEFVEDRNH----KIHRTGS------LRLYNIGPQD-SGLYRCTASNLL 398 (940)
Q Consensus 361 ~~i~~~~~~----~i~~~~s------L~I~~v~~~D-~G~YtC~A~N~~ 398 (940)
..+..+... ....+++ |.|......| .|.|+|.|.|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 162 KEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred EECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 887654221 1122333 3343333333 688999999963
No 388
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=6.4e-13 Score=139.65 Aligned_cols=167 Identities=14% Similarity=0.211 Sum_probs=110.2
Q ss_pred EEeCCCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--Ee---ec-------------CCCCeEEEe----eceEEEE
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---LD-------------SDDHVTYEH----DGFVLVL 103 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~~---I~-------------~~~~~~~~~----~gs~L~I 103 (940)
+...|..+.+.+|++|+|.|.+.+. +.+.+.|||.. .. +. ...++.+.. ....|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 3455778899999999999999764 56789999852 11 10 112333332 2246899
Q ss_pred cccccCCCeEEEEEEEeC--CCc-e-EEEEEEEEec---------ccCCeeEecCCceeecCCCcEEEEEEeCCC-CC-C
Q psy11143 104 NGVRESDAGVYNCVAQNS--EGS-A-ESVAMIRING---------HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-P 168 (940)
Q Consensus 104 ~~v~~~DsG~YtC~a~n~--~g~-~-~~~~~L~V~~---------~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P~-p 168 (940)
.+++.+|+|.|.|.+.+. ... . ...+.|.|.. .+.|.+. .+....+.+|+.++|.|.+.+. |. +
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~-~p~~~~v~~g~~~~L~C~~~g~~P~~~ 162 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIF-LPSVAETNLHKTGTYLCLLEAFFPDVI 162 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEE-CCCHHHHHHHSCEEEEEEEEEESSCCC
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEE-CCCchhhccCCcceEEEEEeeecCCCe
Confidence 999999999999999874 111 1 1234677752 1222222 2444456679999999999874 75 5
Q ss_pred eEEEee-CCeeccccCc-------eEEeeeceEEEeecccCCCceEEEEEEcCCcce
Q psy11143 169 RISWSK-DEAEFVEDRN-------HKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 217 (940)
Q Consensus 169 ~ItW~k-~g~~i~~~~~-------~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~ 217 (940)
.|+|++ +|..+..... ........|.|..... + |.|+|.+.|.....
T Consensus 163 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 163 RVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp EEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred EEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 999999 7766643210 1112234688888775 4 99999999976643
No 389
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.43 E-value=6.4e-13 Score=140.52 Aligned_cols=175 Identities=15% Similarity=0.244 Sum_probs=115.2
Q ss_pred CCCcEEEecCCeEEEEEEeeccC----CCeEEEEECC--E---ee---c----------------CCCCeEEEee----c
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHP----LPQMTWFHDG--N---SL---D----------------SDDHVTYEHD----G 98 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P----~p~V~W~kdg--~---~I---~----------------~~~~~~~~~~----g 98 (940)
+|..+.+.+|++|+|.|.+.+.+ ...+.|||.. . .+ . ...++.+..+ .
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 85 (239)
T 3tv3_H 6 ESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNL 85 (239)
T ss_dssp EESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTE
T ss_pred cCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCE
Confidence 34567799999999999998765 3489999842 1 11 1 0123333321 2
Q ss_pred eEEEEcccccCCCeEEEEEEEeCCCc-----------e--EEEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeC
Q psy11143 99 FVLVLNGVRESDAGVYNCVAQNSEGS-----------A--ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPD 163 (940)
Q Consensus 99 s~L~I~~v~~~DsG~YtC~a~n~~g~-----------~--~~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~ 163 (940)
..|.|.+++.+|+|.|.|.+.+..+. . .....|.|.. ...|.+...+....+..|+.++|.|.+.
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 165 (239)
T 3tv3_H 86 VFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 165 (239)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEe
Confidence 35899999999999999999875320 1 1123556642 2346666555555567899999999998
Q ss_pred C-CCCC-eEEEeeCCeeccc-------cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 164 G-EPLP-RISWSKDEAEFVE-------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 164 g-~P~p-~ItW~k~g~~i~~-------~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
+ .|.+ .+.|++++..+.. .....+...+.|.|......| |.|+|.|.|..+.......|.+.
T Consensus 166 ~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 236 (239)
T 3tv3_H 166 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 236 (239)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred eEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEeccc
Confidence 7 5544 5899998864321 111122233468899988888 99999999988776666665543
No 390
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.43 E-value=4.3e-13 Score=141.83 Aligned_cols=172 Identities=15% Similarity=0.250 Sum_probs=116.0
Q ss_pred CCeeEEecCCeEEEEEEEeeeCC----CeEEEEECC--ee---c---C----------------CCCceEEeec----Ce
Q psy11143 236 PVSTTYSTGSTSRITCLVEGHPL----PQMTWFHDG--NS---L---D----------------SDDHVTYEHD----GF 283 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~P~----p~ItW~k~g--~~---l---~----------------~~~~~~~~~~----g~ 283 (940)
+....+.+|++++|.|.+.+.+. ..+.|++.. .. + . ...++.+..+ ..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 44567889999999999988653 489999842 11 1 0 1134444322 23
Q ss_pred EEEEeeeccCCCeEEEEEEEeCCCC-------------ceeEEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecC
Q psy11143 284 VLVLNGVRESDAGVYNCVAQNSEGS-------------AESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDG 348 (940)
Q Consensus 284 sL~I~~v~~~DsG~YtC~A~N~~Gs-------------~~~s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g 348 (940)
+|.|.+++.+|+|.|.|.+.+..+. ......+.|. ...+|.+...+....+..|+.++|.|.+.+
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~ 166 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 166 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEee
Confidence 5999999999999999999876321 1122345553 234666665555555667999999999998
Q ss_pred -cCCC-eEEEEeCCeeec---------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 349 -EPLP-RISWSKDEAEFV---------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 349 -~P~p-~i~W~k~g~~i~---------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
.|.+ .+.|++++..+. .+..+. ..+.|.|......| |.|+|.|.|..+.......|.+.
T Consensus 167 ~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 236 (239)
T 3tv3_H 167 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 236 (239)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEE--EEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EeCCCeEEEEEECCccCceEecCceECCCCCEE--EEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEeccc
Confidence 4545 589999886321 122222 23578899988888 99999999998877766666543
No 391
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=118.48 Aligned_cols=92 Identities=26% Similarity=0.465 Sum_probs=83.2
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.+...+.+..+.+|+++.|.|.+.|.|.|.+.|+|++..+....++.+...+ +|.|.++..+|+|.|+|.|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 4688888888899999999999999999999999999999999877777765533 7999999999999999999999
Q ss_pred CeeEEEEEEEEEecC
Q psy11143 398 LGEDVAEGYLTVTGE 412 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~ 412 (940)
.|..+..+.|.|++.
T Consensus 87 ~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 87 KGEASDYATLDVTGG 101 (103)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CCcEEEEEEEEEECC
Confidence 999999999999875
No 392
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.42 E-value=9.9e-13 Score=120.29 Aligned_cols=93 Identities=29% Similarity=0.485 Sum_probs=84.5
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.+...+....+.+|++++|.|.+.|.|.|.|.|+|++..+....++.+..++ +|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 91 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcC
Confidence 5788888888899999999999999999999999999999999887888777766 8999999999999999999999
Q ss_pred CeeEEEEEEEEEecCC
Q psy11143 398 LGEDVAEGYLTVTGEN 413 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~~ 413 (940)
.|.....+.|.|.++|
T Consensus 92 ~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCcEEEEEEEEEEcCC
Confidence 9999999999998763
No 393
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.42 E-value=1.2e-12 Score=148.35 Aligned_cols=159 Identities=14% Similarity=0.156 Sum_probs=112.3
Q ss_pred EecCCeEEEEEEEeee-CCC---eEEEEECCeecCCCCc---eEE----eecCeEEEEeeeccCCCeEEEEEEEeCCCCc
Q psy11143 241 YSTGSTSRITCLVEGH-PLP---QMTWFHDGNSLDSDDH---VTY----EHDGFVLVLNGVRESDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 241 v~~G~~v~L~C~v~G~-P~p---~ItW~k~g~~l~~~~~---~~~----~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~ 309 (940)
+..|++++|.|.+.|. |.| .|+|++++..+..... ... ......|.|..+..+|.|.|+|.+.|..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 7889999999999987 333 7999999876532110 000 0112249999999999999999999987754
Q ss_pred eeEEEEEE--eeccCCeEEEcCCceeecCCCeEEEEEeecCcC--CCeEEEEeCCeeeccCCcE--EEee------eceE
Q psy11143 310 ESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEP--LPRISWSKDEAEFVEDRNH--KIHR------TGSL 377 (940)
Q Consensus 310 ~~s~~l~V--~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P--~p~i~W~k~g~~i~~~~~~--~i~~------~~sL 377 (940)
.....+.+ ....+|.+.+.+.......|+.++|.|.+.|.+ .+.|+|+|+|..+...... .... .+.|
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L 339 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKL 339 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEE
Confidence 44333332 445688888777666556789999999999863 3499999999876432111 1112 2357
Q ss_pred EEecCCCCCCeEEEEEEEeCCe
Q psy11143 378 RLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 378 ~I~~v~~~D~G~YtC~A~N~~G 399 (940)
.|.....+|.|.|+|.|.|..-
T Consensus 340 ~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 340 NVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEcHHHhCCCCcEEEEEEeCCC
Confidence 7777777789999999999643
No 394
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.41 E-value=3.3e-14 Score=147.79 Aligned_cols=165 Identities=18% Similarity=0.252 Sum_probs=110.4
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCC---CeEEEEECCeecCCCCc--------eEEeecCeEEEEeeeccCCCeEEEE
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPL---PQMTWFHDGNSLDSDDH--------VTYEHDGFVLVLNGVRESDAGVYNC 300 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~---p~ItW~k~g~~l~~~~~--------~~~~~~g~sL~I~~v~~~DsG~YtC 300 (940)
+...|....+.+|++++|.|.+.|.++ +.|.| ++..+..... -.+. ....|.|.++..+|+|.|+|
T Consensus 7 ~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~-~~~~L~I~~~~~~D~g~Y~C 83 (214)
T 1ow0_A 7 SLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYS-VSSVLPGCAEPWNHGKTFTC 83 (214)
T ss_dssp EEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCC-EEEECTTTHHHHHHTCEEEE
T ss_pred EEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEE-EEEEEEEeHHHcCCCCeEEE
Confidence 344566677889999999999998754 68999 4444321100 0001 12348888888999999999
Q ss_pred EEEeCCCCceeEEEEEE-eeccCCeEEEcC-CceeecCCCeEEEEEeecCc-CC-CeEEEEeCCeeeccCCc----EEEe
Q psy11143 301 VAQNSEGSAESVAMIRI-NGHRAPRLVVKP-FDMRAPAGSSVEIPCKPDGE-PL-PRISWSKDEAEFVEDRN----HKIH 372 (940)
Q Consensus 301 ~A~N~~Gs~~~s~~l~V-~~~~~P~i~~~p-~~~~v~~G~~vtL~C~v~g~-P~-p~i~W~k~g~~i~~~~~----~~i~ 372 (940)
.|.|..+.......+.+ ....+|.+.+.+ ....+..|+.++|.|.+.|. |. +.|+|+|+|..+..... ....
T Consensus 84 ~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~ 163 (214)
T 1ow0_A 84 TAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQE 163 (214)
T ss_dssp EECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEEC
T ss_pred EEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCccc
Confidence 99998876544444432 345678775544 33346789999999999985 54 49999999988765421 1223
Q ss_pred ---eeceE------EEecCCCCCCeEEEEEEEeCCe
Q psy11143 373 ---RTGSL------RLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 373 ---~~~sL------~I~~v~~~D~G~YtC~A~N~~G 399 (940)
.++++ .|......+.|.|+|.|.|..-
T Consensus 164 ~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 164 PSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp SCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred ccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 34443 3433333458999999999754
No 395
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=148.06 Aligned_cols=167 Identities=16% Similarity=0.178 Sum_probs=114.9
Q ss_pred EeCCCcEE-EecCCeEEEEEEeecc---CC-CeEEEEECCEeecCCCC---eEEE----eeceEEEEcccccCCCeEEEE
Q psy11143 49 IQRPVSTT-YSTGSTSRITCLVEGH---PL-PQMTWFHDGNSLDSDDH---VTYE----HDGFVLVLNGVRESDAGVYNC 116 (940)
Q Consensus 49 ~~~p~~~~-V~eGesv~L~C~v~g~---P~-p~V~W~kdg~~I~~~~~---~~~~----~~gs~L~I~~v~~~DsG~YtC 116 (940)
...|.... +.+|++++|.|.+.|. |. ..|+|+|++..+..... .+.. .....|.|..++.+|+|.|+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 33444344 7899999999999987 32 37999999976532110 0111 122357999999999999999
Q ss_pred EEEeCCCceEEEEEEEE--ecccCCeeEecCCceeecCCCcEEEEEEeCCC-C-CCeEEEeeCCeeccccCce-------
Q psy11143 117 VAQNSEGSAESVAMIRI--NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWSKDEAEFVEDRNH------- 185 (940)
Q Consensus 117 ~a~n~~g~~~~~~~L~V--~~~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P-~p~ItW~k~g~~i~~~~~~------- 185 (940)
.+.+..+.......+.+ ....+|.+.+.+....+.+|+.++|.|.+.|. | .+.|+|+++|..+......
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~d 330 (376)
T 2aty_A 251 RVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTN 330 (376)
T ss_pred EEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCC
Confidence 99998775444333322 33446777777766666679999999999985 3 4589999999876432111
Q ss_pred -EEeeeceEEEeecccCCCceEEEEEEcCCc
Q psy11143 186 -KIHRTGSLRLYNIGPQDSGLYRCTASNLLG 215 (940)
Q Consensus 186 -~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g 215 (940)
.+.....|.|.....+|.|.|+|.|.|..-
T Consensus 331 gty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 331 ESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 112223477777777789999999998654
No 396
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.41 E-value=6e-13 Score=139.72 Aligned_cols=174 Identities=13% Similarity=0.235 Sum_probs=109.8
Q ss_pred CCcEEEecCCeEEEEEEeeccC--CC--eEEEEECC--E---ee-----c-----------CCCCeEEEee----ceEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHP--LP--QMTWFHDG--N---SL-----D-----------SDDHVTYEHD----GFVLV 102 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P--~p--~V~W~kdg--~---~I-----~-----------~~~~~~~~~~----gs~L~ 102 (940)
|..+.+.+|++|+|.|.+.+.+ .. .|.|||.. . .+ . ...++.+..+ ...|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 3456789999999999997632 23 44999832 1 11 0 0124444322 23589
Q ss_pred EcccccCCCeEEEEEEEeCCC--------ceEEEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCCC-C-CCeE
Q psy11143 103 LNGVRESDAGVYNCVAQNSEG--------SAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRI 170 (940)
Q Consensus 103 I~~v~~~DsG~YtC~a~n~~g--------~~~~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g~-P-~p~I 170 (940)
|.+++.+|+|.|.|.+.+..+ .......|.|.. ...|.+...+....+..|+.++|.|.+.+. | ...+
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v 166 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 166 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEE
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEE
Confidence 999999999999999987631 111234566642 234666544445566789999999999874 4 3368
Q ss_pred EEeeCCeeccc-------cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 171 SWSKDEAEFVE-------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 171 tW~k~g~~i~~-------~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.|++++..+.. .....+...+.|.|......| |.|+|.|.|..+.......|.+.
T Consensus 167 ~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 167 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp EEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 89998864321 111122233468899998888 99999999988777766666554
No 397
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.41 E-value=4.8e-13 Score=140.46 Aligned_cols=171 Identities=13% Similarity=0.244 Sum_probs=110.8
Q ss_pred CeeEEecCCeEEEEEEEeeeC--CCeE--EEEECC--ee---c-----C-----------CCCceEEeecC----eEEEE
Q psy11143 237 VSTTYSTGSTSRITCLVEGHP--LPQM--TWFHDG--NS---L-----D-----------SDDHVTYEHDG----FVLVL 287 (940)
Q Consensus 237 ~~~~v~~G~~v~L~C~v~G~P--~p~I--tW~k~g--~~---l-----~-----------~~~~~~~~~~g----~sL~I 287 (940)
....+.+|++++|.|.+.+.+ ...+ .|++.. .. + . ...++.+..+. .+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 346788999999999998642 2444 999842 11 1 0 11344444322 35999
Q ss_pred eeeccCCCeEEEEEEEeCCC--------CceeEEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecCcCC-C-eEE
Q psy11143 288 NGVRESDAGVYNCVAQNSEG--------SAESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL-P-RIS 355 (940)
Q Consensus 288 ~~v~~~DsG~YtC~A~N~~G--------s~~~s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~-p-~i~ 355 (940)
.+++.+|+|.|.|.+.+..+ .......+.|. ...+|.+...+....+..|+.++|.|.+.+.++ + .+.
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 167 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 167 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEE
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEE
Confidence 99999999999999997631 12223456664 235666664444445667999999999998544 2 688
Q ss_pred EEeCCeeec---------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 356 WSKDEAEFV---------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 356 W~k~g~~i~---------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
|++++..+. .+..+. ..+.|.|......| |.|+|.|.|..+.......|.+.
T Consensus 168 W~~~g~~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 168 WNSGALTSGVHTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp EGGGTBCTTEEECCCEECTTSCEE--EEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEECCEecceeeccceeCCCCCEE--EEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 999886321 122222 23578899998888 99999999998887777666543
No 398
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.41 E-value=4.2e-14 Score=147.00 Aligned_cols=167 Identities=18% Similarity=0.259 Sum_probs=110.4
Q ss_pred eEEeCCCcEEEecCCeEEEEEEeeccCC---CeEEEEECCEeecCC--------CCeEEEeeceEEEEcccccCCCeEEE
Q psy11143 47 IFIQRPVSTTYSTGSTSRITCLVEGHPL---PQMTWFHDGNSLDSD--------DHVTYEHDGFVLVLNGVRESDAGVYN 115 (940)
Q Consensus 47 ~~~~~p~~~~V~eGesv~L~C~v~g~P~---p~V~W~kdg~~I~~~--------~~~~~~~~gs~L~I~~v~~~DsG~Yt 115 (940)
.+...|....+.+|+.++|.|.+.+.++ +.|.| ++..+... ...++. ....|.|.+++.+|+|.|+
T Consensus 6 v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~-~~~~L~I~~~~~~D~g~Y~ 82 (214)
T 1ow0_A 6 LSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYS-VSSVLPGCAEPWNHGKTFT 82 (214)
T ss_dssp CEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCC-EEEECTTTHHHHHHTCEEE
T ss_pred EEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEE-EEEEEEEeHHHcCCCCeEE
Confidence 3345578888899999999999998754 68999 44433211 000111 2235789999999999999
Q ss_pred EEEEeCCCceEEEEEEEE-ecccCCeeEecC-CceeecCCCcEEEEEEeCC-CCC-CeEEEeeCCeeccccCc----eEE
Q psy11143 116 CVAQNSEGSAESVAMIRI-NGHRAPRLVVKP-FDMRAPAGSSVEIPCKPDG-EPL-PRISWSKDEAEFVEDRN----HKI 187 (940)
Q Consensus 116 C~a~n~~g~~~~~~~L~V-~~~~~P~~~~~p-~~~~v~~Ge~vtL~C~v~g-~P~-p~ItW~k~g~~i~~~~~----~~~ 187 (940)
|.+.|..+.......+.+ ....+|.+.+.+ ....+..|+.++|.|.+.| +|. +.|+|+++|..+..... ...
T Consensus 83 C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 162 (214)
T 1ow0_A 83 CTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQ 162 (214)
T ss_dssp EEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEE
T ss_pred EEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcc
Confidence 999998765444344432 233456665443 3334678999999999998 454 49999999988765421 122
Q ss_pred e---eece------EEEeecccCCCceEEEEEEcCCcc
Q psy11143 188 H---RTGS------LRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 188 ~---~~~s------L~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
. .+++ |.|......+.|.|+|.|.|....
T Consensus 163 ~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 163 EPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp CSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred cccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 2 3333 334443334589999999997543
No 399
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=5.6e-13 Score=120.58 Aligned_cols=93 Identities=30% Similarity=0.551 Sum_probs=83.8
Q ss_pred ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeec-cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCC
Q psy11143 320 HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV-EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLL 398 (940)
Q Consensus 320 ~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~-~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~ 398 (940)
..+|.+...|....+.+|++++|.|.+.|.|.|.|.|+|++..+. ...++.+..+++|.|.++..+|+|.|+|.|.|..
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSS
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCC
Confidence 357888888888899999999999999999999999999998886 3456666677899999999999999999999999
Q ss_pred eeEEEEEEEEEecC
Q psy11143 399 GEDVAEGYLTVTGE 412 (940)
Q Consensus 399 G~~~~s~~L~V~~~ 412 (940)
|....++.|.|.++
T Consensus 86 g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 86 GETSWSAVLDVTES 99 (100)
T ss_dssp CCCBCCEEEEEESC
T ss_pred CCEEEEEEEEEecC
Confidence 99999999999875
No 400
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=1.4e-12 Score=117.38 Aligned_cols=91 Identities=20% Similarity=0.299 Sum_probs=80.5
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee----eceEEEecCCCCCCeEEEEEEEe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR----TGSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~----~~sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.|...+.+..+.+|++++|.|.+.|.|.|.|.|+|++..+....++.+.. ..+|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 46888888888999999999999999999999999999999988766655432 23799999999999999999999
Q ss_pred CCeeEEEEEEEEEec
Q psy11143 397 LLGEDVAEGYLTVTG 411 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~ 411 (940)
..|....++.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999999975
No 401
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=1.6e-12 Score=136.61 Aligned_cols=169 Identities=19% Similarity=0.286 Sum_probs=110.6
Q ss_pred eEecCCceeecCCCcEEEEEEeCCC--CCCeEEEeeCC--eec---c-------------ccCceEEee-----eceEEE
Q psy11143 141 LVVKPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKDE--AEF---V-------------EDRNHKIHR-----TGSLRL 195 (940)
Q Consensus 141 ~~~~p~~~~v~~Ge~vtL~C~v~g~--P~p~ItW~k~g--~~i---~-------------~~~~~~~~~-----~~sL~I 195 (940)
+...|..+.+.+|++++|.|.+.+. +.+.+.|++.. ..+ . ...++.+.. ..+|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 3445667889999999999999874 56789999842 211 0 123444432 237999
Q ss_pred eecccCCCceEEEEEEcC--Cc--ceeeeeeeeecC--------CCCee-eeCCCeeEEecCCeEEEEEEEeee-CC-Ce
Q psy11143 196 YNIGPQDSGLYRCTASNL--LG--EDVAEGYLTVTG--------APPIF-IQRPVSTTYSTGSTSRITCLVEGH-PL-PQ 260 (940)
Q Consensus 196 ~~v~~~DsG~YtC~a~N~--~g--~~s~s~~L~V~~--------~~p~~-~~~p~~~~v~~G~~v~L~C~v~G~-P~-p~ 260 (940)
.+++.+|+|.|.|.+.+. .. .....+.|.|.. .+|.. ...+....+..|+.++|.|.+.|. |. +.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~ 163 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIR 163 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCE
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeE
Confidence 999999999999999874 11 112334566651 12222 222333445578999999999986 75 59
Q ss_pred EEEEE-CCeecCCCCc-eEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCcee
Q psy11143 261 MTWFH-DGNSLDSDDH-VTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAES 311 (940)
Q Consensus 261 ItW~k-~g~~l~~~~~-~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~ 311 (940)
|+|++ +|..+..... .....++ ..|.|..... + |.|+|.|.|..+....
T Consensus 164 v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~~ 219 (230)
T 1ypz_F 164 VYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGGA 219 (230)
T ss_dssp EEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTTS
T ss_pred EEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCce
Confidence 99999 8877653211 1112222 2477877765 4 9999999998875443
No 402
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.40 E-value=6.7e-12 Score=131.67 Aligned_cols=174 Identities=13% Similarity=0.302 Sum_probs=115.9
Q ss_pred CCCcEEEecCCeEEEEEEeec--cCCCeEEEEECC--E---ee---c-----------CCCCeEEEee----ceEEEEcc
Q psy11143 51 RPVSTTYSTGSTSRITCLVEG--HPLPQMTWFHDG--N---SL---D-----------SDDHVTYEHD----GFVLVLNG 105 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g--~P~p~V~W~kdg--~---~I---~-----------~~~~~~~~~~----gs~L~I~~ 105 (940)
+|..+.+.+|++|+|.|.+.+ .+...+.|||.. . .+ . ...++.+..+ ...|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (230)
T 3n9g_H 6 QSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSS 85 (230)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 344678999999999999975 234589999732 1 11 0 0124444322 23489999
Q ss_pred cccCCCeEEEEEEEeCC-----CceE---EEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCC-CC-CCeEEEe
Q psy11143 106 VRESDAGVYNCVAQNSE-----GSAE---SVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EP-LPRISWS 173 (940)
Q Consensus 106 v~~~DsG~YtC~a~n~~-----g~~~---~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P-~p~ItW~ 173 (940)
++.+|+|.|.|.+.+.. +... ..+.|.|.. ...|.+...+....+.+|+.++|.|.+.+ .| .+.+.|
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W- 164 (230)
T 3n9g_H 86 LRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 164 (230)
T ss_dssp CCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE-
T ss_pred CChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE-
Confidence 99999999999998754 1111 134566643 23455554444555678999999999987 44 347999
Q ss_pred eCCeecccc---------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeecC
Q psy11143 174 KDEAEFVED---------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 227 (940)
Q Consensus 174 k~g~~i~~~---------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~~ 227 (940)
++..+... ....+...+.|.|.....+| |.|+|.|.+..+.......+.|..
T Consensus 165 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 165 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred -CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 44443211 11122233478999999999 999999999888777777776653
No 403
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=7.3e-13 Score=123.88 Aligned_cols=110 Identities=27% Similarity=0.529 Sum_probs=92.4
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC-CCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS-DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~-~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|....+.+|+.++|.|.+.|.|.+.|.|+|+|..+.. ..+..+..++ .|.|.+++.+|+|.|+|.|.|..
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~-~L~i~~v~~~D~G~Y~C~a~n~~ 85 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG-VLQIRYAKLGDTGRYTCIASTPS 85 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT-EEEEESCCGGGCCCEEEEEECSS
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC-EEEEccCCcCCCEEEEEEEEcCC
Confidence 478888889999999999999999999999999999999998864 3344444444 57999999999999999999999
Q ss_pred CceEEEEEEEEecccCCeeEecCCceeecCCC
Q psy11143 123 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGS 154 (940)
Q Consensus 123 g~~~~~~~L~V~~~~~P~~~~~p~~~~v~~Ge 154 (940)
|.....+.|.|...+.|.+...+.+..+.+|.
T Consensus 86 g~~~~~~~l~V~~~~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 86 GEATWSAYIEVQEFGVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp CEEEEECCEEEECCSCCCCCCCCCCCCCCCCC
T ss_pred CcEEEEEEEEEEeCCCCccCCCCCCCccCCCC
Confidence 99888888999877667666667777777764
No 404
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=120.98 Aligned_cols=94 Identities=23% Similarity=0.445 Sum_probs=83.7
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeecc-CCcEEEeeec----eEEEecCCCCCCeEEEEEEE
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE-DRNHKIHRTG----SLRLYNIGPQDSGLYRCTAS 395 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~-~~~~~i~~~~----sL~I~~v~~~D~G~YtC~A~ 395 (940)
.+|.|+..|.++.+.+|++++|.|.+.|.|.|.|.|+|++..+.. ..++.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 578888889999999999999999999999999999999998874 4566665443 79999999999999999999
Q ss_pred eCCeeEEEEEEEEEecCCC
Q psy11143 396 NLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 396 N~~G~~~~s~~L~V~~~~~ 414 (940)
|..|.....+.|.|..+|.
T Consensus 94 N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp ETTEEEEEEEEEEEECCSC
T ss_pred cCCCeEEEEEEEEEeCCCC
Confidence 9999999999999998764
No 405
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.39 E-value=3e-12 Score=115.19 Aligned_cols=91 Identities=27% Similarity=0.438 Sum_probs=82.5
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.+...+.+..+.+|++++|.|.+.|.|.|.+.|+|++..+....++.+...+ +|.|.++..+|+|.|+|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 4678888888889999999999999999999999999999999877777776554 7999999999999999999999
Q ss_pred CeeEEEEEEEEEec
Q psy11143 398 LGEDVAEGYLTVTG 411 (940)
Q Consensus 398 ~G~~~~s~~L~V~~ 411 (940)
.|....++.|.|++
T Consensus 85 ~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSSCKLTIKA 98 (99)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEeEEEEEEEEe
Confidence 99999999999874
No 406
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.38 E-value=7e-13 Score=121.53 Aligned_cols=101 Identities=29% Similarity=0.525 Sum_probs=74.3
Q ss_pred EEEEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEE
Q psy11143 37 DLHVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNC 116 (940)
Q Consensus 37 ~v~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC 116 (940)
.+.|.+..+|.+...+....+.+|+.++|.|.+.|.|.+.|.|+|++..+.......+...+..|.|.+++.+|+|.|+|
T Consensus 2 ~~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 81 (108)
T 3kvq_A 2 QLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTC 81 (108)
T ss_dssp ---------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEE
T ss_pred ceeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEE
Confidence 35567778899999999999999999999999999999999999999998776666666666678999999999999999
Q ss_pred EEEeCCCceEEEEEEEEeccc
Q psy11143 117 VAQNSEGSAESVAMIRINGHR 137 (940)
Q Consensus 117 ~a~n~~g~~~~~~~L~V~~~~ 137 (940)
.|.|..|.....+.|.|.+.+
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 82 QACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp EEC----CEEEEEEEEEEC--
T ss_pred EEEeCCCceEEEEEEEEeCCC
Confidence 999999999888888887643
No 407
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.38 E-value=4.9e-12 Score=134.81 Aligned_cols=176 Identities=13% Similarity=0.242 Sum_probs=112.5
Q ss_pred eCCCcEEEecCCeEEEEEEeec--cCCCeEEEEECC--E---ee---c-----------CCCCeEEEee----ceEEEEc
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEG--HPLPQMTWFHDG--N---SL---D-----------SDDHVTYEHD----GFVLVLN 104 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g--~P~p~V~W~kdg--~---~I---~-----------~~~~~~~~~~----gs~L~I~ 104 (940)
.+|..+.+.+|++|+|.|.+.+ .+...+.|||.. . .+ . ...++.+..+ ...|.|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 4556788999999999999975 234689999742 1 11 0 1134444322 2358999
Q ss_pred ccccCCCeEEEEEEEeCCC--------------------c--eEEEEEEEEec--ccCCeeEecCCceeecCCCcEEEEE
Q psy11143 105 GVRESDAGVYNCVAQNSEG--------------------S--AESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPC 160 (940)
Q Consensus 105 ~v~~~DsG~YtC~a~n~~g--------------------~--~~~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C 160 (940)
+++.+|+|.|.|.+.+..+ . ....+.|.|.. ...|.+...+....+..|+.++|.|
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C 163 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 163 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEE
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEE
Confidence 9999999999999987421 0 11134566652 2345665555555566799999999
Q ss_pred EeCC-CC-CCeEEEeeCCeeccc-------cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 161 KPDG-EP-LPRISWSKDEAEFVE-------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 161 ~v~g-~P-~p~ItW~k~g~~i~~-------~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
.+.+ .| ...++|++++..+.. .........+.|.|......| |.|+|.|.|..+.......+.+.
T Consensus 164 ~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 164 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred EEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEccC
Confidence 9987 45 457999998764321 111122233468888888888 99999999987776665555544
No 408
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=116.67 Aligned_cols=92 Identities=28% Similarity=0.448 Sum_probs=79.1
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcE--EEeeec--eEEEecCCCCCCeEEEEEEEe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNH--KIHRTG--SLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~--~i~~~~--sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.+...|....+.+|++++|.|.+.|.|.|.|.|+|++..+....+. .....+ +|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 4677777788889999999999999999999999999999988765432 222333 899999999999999999999
Q ss_pred CCeeEEEEEEEEEecC
Q psy11143 397 LLGEDVAEGYLTVTGE 412 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~~ 412 (940)
..|..+.++.|.|.+.
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999999999999864
No 409
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.37 E-value=3.5e-12 Score=114.84 Aligned_cols=91 Identities=29% Similarity=0.513 Sum_probs=79.4
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCC-cEEEeeec---eEEEecCCCCCCeEEEEEEEe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR-NHKIHRTG---SLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~-~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.+...+....+.+|++++|.|.+.|.|.|.|.|+|++..+.... ++.+..++ +|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 46888888888899999999999999999999999999999886554 34443333 699999999999999999999
Q ss_pred CCeeEEEEEEEEEec
Q psy11143 397 LLGEDVAEGYLTVTG 411 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~ 411 (940)
..|....++.|.|++
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999999999999975
No 410
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.37 E-value=2.7e-12 Score=116.59 Aligned_cols=94 Identities=23% Similarity=0.501 Sum_probs=82.6
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEE
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~ 119 (940)
+..+|.+...+....+.+|+.+.|.|.+.|.|.|.|.|+|++..+....+..+...+ ..|.|.+++.+|+|.|+|.|.
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 345688888899999999999999999999999999999999999877777666433 468999999999999999999
Q ss_pred eCCCceEEEEEEEEec
Q psy11143 120 NSEGSAESVAMIRING 135 (940)
Q Consensus 120 n~~g~~~~~~~L~V~~ 135 (940)
|..|.....+.|.|.+
T Consensus 85 N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 85 NYKGEASDYATLDVTG 100 (103)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEC
Confidence 9999988888888865
No 411
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=3.2e-12 Score=118.75 Aligned_cols=95 Identities=20% Similarity=0.355 Sum_probs=82.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEe--eceEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH--DGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~--~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.|...|..+.+.+|+.++|.|.+.|.|.+.|.|+|++..+....++.+.. ....|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 47888888999999999999999999999999999999999988766666653 2456899999999999999999999
Q ss_pred CCceEEEEEEEEecccC
Q psy11143 122 EGSAESVAMIRINGHRA 138 (940)
Q Consensus 122 ~g~~~~~~~L~V~~~~~ 138 (940)
.|.....+.|.|...+.
T Consensus 86 ~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp SCEEECCEEEEEECSCS
T ss_pred CCcEEEEEEEEEECCCC
Confidence 99888888888876543
No 412
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.37 E-value=4.7e-12 Score=132.82 Aligned_cols=171 Identities=13% Similarity=0.306 Sum_probs=116.0
Q ss_pred CCeeEEecCCeEEEEEEEee--eCCCeEEEEECC--ee---c---C-----------CCCceEEeecC----eEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEG--HPLPQMTWFHDG--NS---L---D-----------SDDHVTYEHDG----FVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G--~P~p~ItW~k~g--~~---l---~-----------~~~~~~~~~~g----~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+ .+...+.|++.. .. + . ...++.+..++ .+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 34577889999999999976 345689999742 11 1 0 12344443322 34999999
Q ss_pred ccCCCeEEEEEEEeCCC-----Cc---eeEEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecCc-C-CCeEEEEe
Q psy11143 291 RESDAGVYNCVAQNSEG-----SA---ESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWSK 358 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~G-----s~---~~s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P-~p~i~W~k 358 (940)
+.+|+|.|.|.+.+..+ .. .....|.|. ...+|.+...+....+..|+.++|.|.+.+. | .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W-- 164 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-- 164 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--
Confidence 99999999999988641 11 123356664 2356666654444456789999999999985 4 247999
Q ss_pred CCeeecc-----------CCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 359 DEAEFVE-----------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 359 ~g~~i~~-----------~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
++..+.. +..+ ...+.|.|.....+| |.|+|.|.|..+.......|.|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~g~~--~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 165 NSGALTSGVHTFPAVLQSSGLY--SLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp GGGTBCTTEEECCCEECTTSCE--EEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred CCcccCCCeEeCCceECCCCCE--EEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 5443321 1122 223479999999999 999999999988877777666654
No 413
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.37 E-value=2e-12 Score=115.38 Aligned_cols=89 Identities=24% Similarity=0.325 Sum_probs=75.4
Q ss_pred CCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCC--eeeccCCcEEEe-eeceEEEecCCCCCCeEEEEEEEeCC
Q psy11143 322 APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE--AEFVEDRNHKIH-RTGSLRLYNIGPQDSGLYRCTASNLL 398 (940)
Q Consensus 322 ~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g--~~i~~~~~~~i~-~~~sL~I~~v~~~D~G~YtC~A~N~~ 398 (940)
+|.|...+..+.+.+|+.+.|.|.+.|.|.|.|.|+|++ ..+......... ..++|.|.++..+|+|.|+|.|.|..
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 81 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNEL 81 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETT
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCC
Confidence 677777777889999999999999999999999999999 777554333221 23579999999999999999999999
Q ss_pred eeEEEEEEEEEe
Q psy11143 399 GEDVAEGYLTVT 410 (940)
Q Consensus 399 G~~~~s~~L~V~ 410 (940)
|..+.++.|.|+
T Consensus 82 G~~~~~~~l~V~ 93 (93)
T 1wit_A 82 GEDEAIFEVIVQ 93 (93)
T ss_dssp EEEEEEEEEEEC
T ss_pred CeEEEEEEEEEC
Confidence 999999988874
No 414
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=4.3e-12 Score=114.27 Aligned_cols=92 Identities=24% Similarity=0.414 Sum_probs=79.3
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE---eeceEEEEcccccCCCeEEEEEEEe
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE---HDGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~---~~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.|.|+|+|..+....+..+. .....|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 3678888899999999999999999999999999999999999876665543 2234689999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy11143 121 SEGSAESVAMIRING 135 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~ 135 (940)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999988888888754
No 415
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.36 E-value=9.5e-13 Score=120.63 Aligned_cols=100 Identities=27% Similarity=0.566 Sum_probs=72.8
Q ss_pred EEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEe-eeceEEEecCCCCCCeEEEEE
Q psy11143 315 IRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH-RTGSLRLYNIGPQDSGLYRCT 393 (940)
Q Consensus 315 l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~-~~~sL~I~~v~~~D~G~YtC~ 393 (940)
+.|.+..+|.+...+.+..+.+|++++|.|.+.|.|.|.+.|+|++..+....+..+. ..++|.|.++..+|+|.|+|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEE
Confidence 3444557888888888899999999999999999999999999999888766655544 346899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEecCCC
Q psy11143 394 ASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 394 A~N~~G~~~~s~~L~V~~~~~ 414 (940)
|.|..|....++.|.|.+++.
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EC----CEEEEEEEEEEC---
T ss_pred EEeCCCceEEEEEEEEeCCCc
Confidence 999999999999999998754
No 416
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.36 E-value=1.9e-12 Score=115.64 Aligned_cols=89 Identities=18% Similarity=0.296 Sum_probs=75.4
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECC--EeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg--~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
+|.|...+....+.+|+.+.|.|.+.|.|.|.|.|+|++ ..+..............|.|.+++.+|+|.|+|.|.|..
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 81 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNEL 81 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETT
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCC
Confidence 677877788899999999999999999999999999999 887655333333344668999999999999999999999
Q ss_pred CceEEEEEEEE
Q psy11143 123 GSAESVAMIRI 133 (940)
Q Consensus 123 g~~~~~~~L~V 133 (940)
|.....+.|.|
T Consensus 82 G~~~~~~~l~V 92 (93)
T 1wit_A 82 GEDEAIFEVIV 92 (93)
T ss_dssp EEEEEEEEEEE
T ss_pred CeEEEEEEEEE
Confidence 98777777766
No 417
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=2.2e-12 Score=120.57 Aligned_cols=94 Identities=26% Similarity=0.436 Sum_probs=85.0
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeecc-CCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE-DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLG 399 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~-~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G 399 (940)
.+|.+...+.+..+.+|++++|.|.+.|.|.|.|.|+|++..+.. ..++.+..+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSG 86 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSC
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCC
Confidence 578888888888999999999999999999999999999988864 5677777788999999999999999999999999
Q ss_pred eEEEEEEEEEecCCC
Q psy11143 400 EDVAEGYLTVTGENS 414 (940)
Q Consensus 400 ~~~~s~~L~V~~~~~ 414 (940)
....++.|.|..++.
T Consensus 87 ~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 87 EATWSAYIEVQEFGV 101 (118)
T ss_dssp EEEEECCEEEECCSC
T ss_pred cEEEEEEEEEEeCCC
Confidence 999999999998754
No 418
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=1.1e-12 Score=118.33 Aligned_cols=90 Identities=27% Similarity=0.461 Sum_probs=79.5
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
.+|.+...+.+..+.+|++++|.|.+.|.|.|.+.|+|++..+...........++|.|.++..+|+|.|+|.|.|..|.
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 89 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQ 89 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCE
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCe
Confidence 57888888888999999999999999999999999999998887665544444568999999999999999999999999
Q ss_pred EEEEEEEEEe
Q psy11143 401 DVAEGYLTVT 410 (940)
Q Consensus 401 ~~~s~~L~V~ 410 (940)
...++.|.|+
T Consensus 90 ~~~~~~l~V~ 99 (99)
T 2yr3_A 90 VSCSAWVTVH 99 (99)
T ss_dssp EEEECCEEEC
T ss_pred EEEEEEEEEC
Confidence 9988888874
No 419
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.35 E-value=5.4e-12 Score=113.45 Aligned_cols=92 Identities=27% Similarity=0.539 Sum_probs=80.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.+...|....+.+|+.+.|.|.+.+.|.+.|.|+|++..+....+..+..++ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 4678888889999999999999999999999999999999999877777666443 36899999999999999999999
Q ss_pred CCceEEEEEEEEec
Q psy11143 122 EGSAESVAMIRING 135 (940)
Q Consensus 122 ~g~~~~~~~L~V~~ 135 (940)
.|.....+.|.|.+
T Consensus 85 ~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSSCKLTIKA 98 (99)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEeEEEEEEEEe
Confidence 99988888887753
No 420
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.34 E-value=4.7e-12 Score=113.87 Aligned_cols=91 Identities=26% Similarity=0.510 Sum_probs=79.6
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeec--cCCcEEEeee---ceEEEecCCCCCCeEEEEEEE
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFV--EDRNHKIHRT---GSLRLYNIGPQDSGLYRCTAS 395 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~--~~~~~~i~~~---~sL~I~~v~~~D~G~YtC~A~ 395 (940)
.+|.+...+..+.+.+|++++|.|.+.|.|.|.+.|++++..+. ...++.+... ++|.|.++..+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 46777777778899999999999999999999999999999886 3456666554 689999999999999999999
Q ss_pred eCCeeEEEEEEEEEec
Q psy11143 396 NLLGEDVAEGYLTVTG 411 (940)
Q Consensus 396 N~~G~~~~s~~L~V~~ 411 (940)
|..|.....+.|.|++
T Consensus 84 n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999999999998874
No 421
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.34 E-value=3.9e-12 Score=125.15 Aligned_cols=99 Identities=29% Similarity=0.468 Sum_probs=85.4
Q ss_pred eeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee----eceEEEecCCCCCCeEEEEE
Q psy11143 318 NGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR----TGSLRLYNIGPQDSGLYRCT 393 (940)
Q Consensus 318 ~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~----~~sL~I~~v~~~D~G~YtC~ 393 (940)
.+..+|.|...+.++.+..|++++|.|.+.|.|.|.|.|+|++..+....++.+.. ..+|.|.++..+|+|.|+|.
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEE
Confidence 33467888888888999999999999999999999999999999988777777653 34899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEecCCCCC
Q psy11143 394 ASNLLGEDVAEGYLTVTGENSVE 416 (940)
Q Consensus 394 A~N~~G~~~~s~~L~V~~~~~~~ 416 (940)
|.|..|.....+.|.|..++.+.
T Consensus 117 a~N~~G~~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVETMGKEG 139 (154)
T ss_dssp EEETTEEEEEEEEEEEECC----
T ss_pred EEECCCeEEEEEEEEEeCcCcCC
Confidence 99999999999999999876543
No 422
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.34 E-value=5.1e-12 Score=134.67 Aligned_cols=174 Identities=16% Similarity=0.233 Sum_probs=109.0
Q ss_pred ecCCceeecCCCcEEEEEEeCC--CCCCeEEEeeC--Ceecc-----------------ccCceEEeee-----ceEEEe
Q psy11143 143 VKPFDMRAPAGSSVEIPCKPDG--EPLPRISWSKD--EAEFV-----------------EDRNHKIHRT-----GSLRLY 196 (940)
Q Consensus 143 ~~p~~~~v~~Ge~vtL~C~v~g--~P~p~ItW~k~--g~~i~-----------------~~~~~~~~~~-----~sL~I~ 196 (940)
..+..+.+.+|++++|.|.+.+ .+...+.|++. +..+. ...++....+ .+|.|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 3456778999999999999975 23468999873 21110 0134444332 259999
Q ss_pred ecccCCCceEEEEEEcCC----------------------cceeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEE
Q psy11143 197 NIGPQDSGLYRCTASNLL----------------------GEDVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITC 251 (940)
Q Consensus 197 ~v~~~DsG~YtC~a~N~~----------------------g~~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C 251 (940)
+++.+|+|.|.|.+.+.. ........|.|.. .+|.+...+....+..|+.++|.|
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C 163 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 163 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEE
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEE
Confidence 999999999999998742 1122234555542 234444344444556799999999
Q ss_pred EEeee-C-CCeEEEEECCeecCCCCc-eEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEEEEE
Q psy11143 252 LVEGH-P-LPQMTWFHDGNSLDSDDH-VTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRI 317 (940)
Q Consensus 252 ~v~G~-P-~p~ItW~k~g~~l~~~~~-~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~l~V 317 (940)
.+.+. | ...++|++++..+..... .....++ ..|.|.....++ |.|+|.|.|..+.......+.+
T Consensus 164 ~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 164 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 99984 5 347999999864421110 0111122 247888888888 9999999999877665544443
No 423
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.34 E-value=4.4e-12 Score=136.46 Aligned_cols=170 Identities=12% Similarity=0.240 Sum_probs=106.3
Q ss_pred CCcEEEecCCeEEEEEEeeccC--CCeEEEEECC--E---ee---c----------CCCCeEEEee----ceEEEEcccc
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHP--LPQMTWFHDG--N---SL---D----------SDDHVTYEHD----GFVLVLNGVR 107 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P--~p~V~W~kdg--~---~I---~----------~~~~~~~~~~----gs~L~I~~v~ 107 (940)
|..+.+.+|++|+|.|.+.+.+ ...|.|||.. . .+ . ...++.+..+ ...|.|.+++
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (263)
T 3iu4_H 7 SGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQ 86 (263)
T ss_dssp ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 3457799999999999997633 4589999742 1 11 0 0234444322 2348999999
Q ss_pred cCCCeEEEEEEEeCCC-----ce-E--EEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCC-CCC-CeEEEeeC
Q psy11143 108 ESDAGVYNCVAQNSEG-----SA-E--SVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EPL-PRISWSKD 175 (940)
Q Consensus 108 ~~DsG~YtC~a~n~~g-----~~-~--~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P~-p~ItW~k~ 175 (940)
.+|+|.|.|.+.+..+ .. . ..+.|.|.. ...|.+........+.+|+.++|.|.+.+ .|. +.++| +
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~ 164 (263)
T 3iu4_H 87 TDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--N 164 (263)
T ss_dssp GGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--G
T ss_pred HHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--C
Confidence 9999999999987641 01 1 134566643 23455554444445668999999999987 443 68999 3
Q ss_pred Ceeccc---------cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeee
Q psy11143 176 EAEFVE---------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 224 (940)
Q Consensus 176 g~~i~~---------~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~ 224 (940)
+..+.. .....+...+.|.|.....+| |.|+|.+.|..+.......+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 165 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred CcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 333211 011122233468898888888 999999999877655554444
No 424
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.33 E-value=4e-12 Score=114.69 Aligned_cols=92 Identities=35% Similarity=0.646 Sum_probs=78.0
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEE--eec-eEEEEcccccCCCeEEEEEEEe
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYE--HDG-FVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~--~~g-s~L~I~~v~~~DsG~YtC~a~n 120 (940)
.+|.+...|....+.+|+.++|.|.+.|.|.+.|.|+|+|..+.......+. .++ ..|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 4677888888999999999999999999999999999999998766543332 222 4689999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy11143 121 SEGSAESVAMIRING 135 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~ 135 (940)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 84 RAGEATFTVQLDVLA 98 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEEe
Confidence 999988888888764
No 425
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.32 E-value=6.6e-12 Score=114.75 Aligned_cols=94 Identities=30% Similarity=0.631 Sum_probs=81.6
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEE
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQ 119 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~ 119 (940)
+..+|.+...|....+.+|+.+.|.|.+.+.|.+.|.|+|++..+....+..+..++ ..|.|.+++.+|+|.|+|.|.
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 345788888999999999999999999999999999999999999877666665544 268999999999999999999
Q ss_pred eCCCceEEEEEEEEec
Q psy11143 120 NSEGSAESVAMIRING 135 (940)
Q Consensus 120 n~~g~~~~~~~L~V~~ 135 (940)
|..|.....+.|.|..
T Consensus 90 n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLE 105 (107)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEEc
Confidence 9999888788787764
No 426
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.32 E-value=2e-11 Score=130.32 Aligned_cols=172 Identities=13% Similarity=0.278 Sum_probs=109.7
Q ss_pred CCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--E---ee--------------cCCCCeEEEee----ceEEEEccc
Q psy11143 52 PVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--N---SL--------------DSDDHVTYEHD----GFVLVLNGV 106 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~---~I--------------~~~~~~~~~~~----gs~L~I~~v 106 (940)
|..+.+.+|++|+|.|.+.+. ....+.|||.. . .+ ....++.+..+ ...|.|.++
T Consensus 30 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (256)
T 3sob_H 30 SGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSL 109 (256)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCC
Confidence 345679999999999999753 24589999732 1 11 01124444322 234899999
Q ss_pred ccCCCeEEEEEEEeCCC---------ce--EEEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCC-CC-CCeEE
Q psy11143 107 RESDAGVYNCVAQNSEG---------SA--ESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EP-LPRIS 171 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g---------~~--~~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P-~p~It 171 (940)
+.+|+|.|.|.+.+..+ .. ...+.|.|.. ..+|.+...+....+.+|+.++|.|.+.+ .| .+.+.
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~ 189 (256)
T 3sob_H 110 RAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 189 (256)
T ss_dssp CGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEE
T ss_pred CcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEE
Confidence 99999999999987531 11 1134566653 23455554444445678999999999987 45 45799
Q ss_pred EeeCCeecccc---------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeeec
Q psy11143 172 WSKDEAEFVED---------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 226 (940)
Q Consensus 172 W~k~g~~i~~~---------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V~ 226 (940)
| ++..+... ....+.....|.|.....+| |.|+|.+.+..+.......+.+.
T Consensus 190 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 190 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred E--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 9 44333211 11112233468899998899 99999999988777666666554
No 427
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=111.49 Aligned_cols=92 Identities=26% Similarity=0.523 Sum_probs=77.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCC-eEEEeec--eEEEEcccccCCCeEEEEEEEe
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH-VTYEHDG--FVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~-~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n 120 (940)
.||.+...|....+.+|+.++|.|.+.|.|.+.|.|+|++..+..... .....++ ..|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 367888888899999999999999999999999999999999876543 2222233 3589999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy11143 121 SEGSAESVAMIRING 135 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~ 135 (940)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999988888888754
No 428
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2.6e-12 Score=118.22 Aligned_cols=94 Identities=29% Similarity=0.499 Sum_probs=82.2
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee--e--ceEEEecCCCCCCeEEEEEEEe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR--T--GSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~--~--~sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.|...+..+.+.+|++++|.|.+.|.|.|.|.|+|++..+.......+.. + .+|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 57888888888999999999999999999999999999998887655443322 2 3799999999999999999999
Q ss_pred CCeeEEEEEEEEEecCCC
Q psy11143 397 LLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~~~~ 414 (940)
..|..+..+.|.|..++.
T Consensus 88 ~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKES 105 (110)
T ss_dssp SSCEEEECCEEEEECCCC
T ss_pred CCCEEEEEEEEEEeCCCC
Confidence 999999999999998765
No 429
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.32 E-value=4.7e-12 Score=113.63 Aligned_cols=88 Identities=23% Similarity=0.411 Sum_probs=78.1
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
.+|.+...+....+.+|++++|.|.+.|.| |.|.|+|++..+..+.++.+. .++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 85 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT-GEEVEVRDSIPADSGLYACVTSSPSGS 85 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC-SSEEEESSCCGGGSEEEEEEEEETTEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe-CCEEEECCCChHHCEEEEEEeccCCCc
Confidence 466777777888999999999999999998 899999999988877776654 679999999999999999999999999
Q ss_pred EEEEEEEEEe
Q psy11143 401 DVAEGYLTVT 410 (940)
Q Consensus 401 ~~~s~~L~V~ 410 (940)
....+.|.|.
T Consensus 86 ~~~~~~l~V~ 95 (95)
T 2ckn_A 86 DTTYFSVNVS 95 (95)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEC
Confidence 9998888773
No 430
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.31 E-value=8.7e-12 Score=116.58 Aligned_cols=96 Identities=22% Similarity=0.491 Sum_probs=81.7
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC-CCCeEEEeec---eEEEEcccccCCCeEEEEEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS-DDHVTYEHDG---FVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~-~~~~~~~~~g---s~L~I~~v~~~DsG~YtC~a 118 (940)
..+|.|+..|..+.+.+|+.++|.|.+.|.|.+.|.|+|++..+.. ..++.+..++ ..|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 3578899999999999999999999999999999999999998874 3455555333 26899999999999999999
Q ss_pred EeCCCceEEEEEEEEecccC
Q psy11143 119 QNSEGSAESVAMIRINGHRA 138 (940)
Q Consensus 119 ~n~~g~~~~~~~L~V~~~~~ 138 (940)
.|..|.....+.|.|...+.
T Consensus 93 ~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp EETTEEEEEEEEEEEECCSC
T ss_pred EcCCCeEEEEEEEEEeCCCC
Confidence 99999888888888876443
No 431
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.31 E-value=1.8e-11 Score=126.65 Aligned_cols=163 Identities=16% Similarity=0.256 Sum_probs=104.6
Q ss_pred eEecCCceeecCCCcEEEEEEeCCCCCCeEEEeeCC--eecc----------ccCceEEeee------ceEEEeecccCC
Q psy11143 141 LVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE--AEFV----------EDRNHKIHRT------GSLRLYNIGPQD 202 (940)
Q Consensus 141 ~~~~p~~~~v~~Ge~vtL~C~v~g~P~p~ItW~k~g--~~i~----------~~~~~~~~~~------~sL~I~~v~~~D 202 (940)
+...|..+.+.+|++++|.|.+.+.+ +.+.|+|.. ..+. ...++.+..+ .+|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 34456678899999999999998654 489999842 2111 2344544432 479999999999
Q ss_pred CceEEEEEEcCCc---------c--eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeee-CC-CeEEEEECCee
Q psy11143 203 SGLYRCTASNLLG---------E--DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PL-PQMTWFHDGNS 269 (940)
Q Consensus 203 sG~YtC~a~N~~g---------~--~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~-p~ItW~k~g~~ 269 (940)
+|.|.|.+.+..+ . ....+.|.|..... ....| ...+..+ .+.|.|.+.|. |. +.|+|+++ ..
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~-~~~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~ 158 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ-PPAKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KK 158 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC-CCCCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCC-CCCCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Cc
Confidence 9999999998642 1 11235666663211 11112 2222222 37999999985 54 69999999 76
Q ss_pred cCCCCc-eEEeecCeEEEEeeecc-CCCeEEEEEEEeCCCCc
Q psy11143 270 LDSDDH-VTYEHDGFVLVLNGVRE-SDAGVYNCVAQNSEGSA 309 (940)
Q Consensus 270 l~~~~~-~~~~~~g~sL~I~~v~~-~DsG~YtC~A~N~~Gs~ 309 (940)
+..... .....++. +.+..... ++.|.|+|.|.|..+..
T Consensus 159 l~~~~~~~~~~~~g~-y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 159 IVEFDPAIVISPSGK-YSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp EEECCCEEEECTTSS-EEEEECEEESSTTTCEEEEEETTEEE
T ss_pred ccCCccceEEcCCCc-EEEEEeecccCCCcEEEEEEECCccE
Confidence 653322 22233444 55544443 67899999999987543
No 432
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=5.1e-12 Score=116.42 Aligned_cols=94 Identities=31% Similarity=0.433 Sum_probs=81.9
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeecc-CCcEEEeee--c--eEEEecCCCCCCeEEEEEEE
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVE-DRNHKIHRT--G--SLRLYNIGPQDSGLYRCTAS 395 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~-~~~~~i~~~--~--sL~I~~v~~~D~G~YtC~A~ 395 (940)
.+|.+...+....+.+|++++|.|.+.|.|.|.|.|+|++..+.. ..++.+... + +|.|.++..+|+|.|+|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 578888888888999999999999999999999999999988865 455555432 3 69999999999999999999
Q ss_pred eCCeeEEEEEEEEEecCCC
Q psy11143 396 NLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 396 N~~G~~~~s~~L~V~~~~~ 414 (940)
|..|.....+.|.|..++.
T Consensus 87 N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp CTTCCEEECCCEEEECCSC
T ss_pred ECCCeEEEEEEEEEECCCC
Confidence 9999999999999998754
No 433
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=4.2e-12 Score=115.62 Aligned_cols=90 Identities=17% Similarity=0.218 Sum_probs=79.6
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.|...+.+..+.+|++++|.|.+ .|.|.+.|+|+|..+..+.++.+..++ +|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 46778888888999999999999999 899999999999999888888876655 7999999999999999999998
Q ss_pred CeeEEEEEEEEEecCCC
Q psy11143 398 LGEDVAEGYLTVTGENS 414 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~~~ 414 (940)
..+.++.|.|.++|.
T Consensus 84 --~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 --NVTLPAKVHVISGPS 98 (100)
T ss_dssp --CCCEEEEEEEECCSC
T ss_pred --CeeEEEEEEEeCCCC
Confidence 567788999988753
No 434
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.30 E-value=2.7e-11 Score=126.82 Aligned_cols=169 Identities=14% Similarity=0.223 Sum_probs=108.9
Q ss_pred CCcEEEecCCeEEEEEEeecc--CCCeEEEEECC--E---ee---c-----------CCCCeEEEee----ceEEEEccc
Q psy11143 52 PVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--N---SL---D-----------SDDHVTYEHD----GFVLVLNGV 106 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~--P~p~V~W~kdg--~---~I---~-----------~~~~~~~~~~----gs~L~I~~v 106 (940)
|..+.+.+|++|+|.|.+.+. +...+.|||.. . .+ . ...++.+..+ ...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 446789999999999999763 34689999842 1 11 0 1124444322 244899999
Q ss_pred ccCCCeEEEEEEEeCCC-------ceE--EEEEEEEec--ccCCeeEecCCceeecCCCcEEEEEEeCC-CC-CCeEEEe
Q psy11143 107 RESDAGVYNCVAQNSEG-------SAE--SVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDG-EP-LPRISWS 173 (940)
Q Consensus 107 ~~~DsG~YtC~a~n~~g-------~~~--~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~C~v~g-~P-~p~ItW~ 173 (940)
+.+|+|.|.|.+.+..+ ... ..+.|.|.. ...|.+...+....+.+|+.++|.|.+.+ .| .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W- 165 (226)
T 3mlr_H 87 QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 165 (226)
T ss_dssp CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE-
T ss_pred CcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE-
Confidence 99999999999986531 001 123455543 23455554444455678999999999987 44 458999
Q ss_pred eCCeeccc---------cCceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeee
Q psy11143 174 KDEAEFVE---------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYL 223 (940)
Q Consensus 174 k~g~~i~~---------~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L 223 (940)
++..+.. .....+...+.|.|.....+| |.|+|.+.|..+.......+
T Consensus 166 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 166 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 222 (226)
T ss_dssp -GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred -CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEEc
Confidence 3332211 011112233468999998889 99999999987765544433
No 435
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.30 E-value=1.3e-11 Score=110.95 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=75.5
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.|...+.++.+.+|++++|.|.+.+ |.|.|.|+|+|..+..+.++.+..++ +|.|.++..+|+|.|+|.|.|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 5788888889999999999999999986 55889999999999888888877655 7999999999999999999884
Q ss_pred CeeEEEEEEEEEecC
Q psy11143 398 LGEDVAEGYLTVTGE 412 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~ 412 (940)
..++.|.|.++
T Consensus 83 ----~~sa~L~V~~~ 93 (93)
T 1waa_A 83 ----KSAANLKVKEL 93 (93)
T ss_dssp ----EEEEEEEEECC
T ss_pred ----cEEEEEEEEcC
Confidence 45778888753
No 436
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=8.2e-12 Score=112.82 Aligned_cols=91 Identities=32% Similarity=0.691 Sum_probs=77.8
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC-CCCeEEEeeceEEEEcccccCCCeEEEEEEEeCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS-DDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSE 122 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~-~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~ 122 (940)
.+|.+...|....+.+|+.++|.|.+.|.|.+.|.|+|++..+.. ..+..+..++ .|.|.+++.+|+|.|+|.|.|..
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG-TLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC-CEEEESCCTTTCCEEEEEEECSS
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC-EEEEccCCcccCEEEEEEEEcCC
Confidence 578888899999999999999999999999999999999998873 3334443344 57999999999999999999999
Q ss_pred CceEEEEEEEEec
Q psy11143 123 GSAESVAMIRING 135 (940)
Q Consensus 123 g~~~~~~~L~V~~ 135 (940)
|.....+.|.|..
T Consensus 86 g~~~~~~~l~V~~ 98 (100)
T 2edj_A 86 GETSWSAVLDVTE 98 (100)
T ss_dssp CCCBCCEEEEEES
T ss_pred CCEEEEEEEEEec
Confidence 9887788888764
No 437
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.29 E-value=2.7e-12 Score=118.04 Aligned_cols=91 Identities=26% Similarity=0.517 Sum_probs=82.3
Q ss_pred ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee---eceEEEecCCCCCCeEEEEEEEe
Q psy11143 320 HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR---TGSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 320 ~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A~N 396 (940)
..+|.|...|.++.+.+|++++|.|.+.|.|.|.|.|+|++..+..+.++.+.. .++|.|.++..+|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 357888888999999999999999999999999999999999888777777655 46899999999999999999999
Q ss_pred CCeeEEEEEEEEEe
Q psy11143 397 LLGEDVAEGYLTVT 410 (940)
Q Consensus 397 ~~G~~~~s~~L~V~ 410 (940)
..|..+.++.|.|+
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99999999999885
No 438
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.29 E-value=2.5e-11 Score=108.99 Aligned_cols=88 Identities=24% Similarity=0.365 Sum_probs=76.8
Q ss_pred EEEcCCceeecCCCeEEEEEeecCc-CCCeEEEEeCCeeeccCCcEEEee-ec--eEEEecCCCCCCeEEEEEEEeCCee
Q psy11143 325 LVVKPFDMRAPAGSSVEIPCKPDGE-PLPRISWSKDEAEFVEDRNHKIHR-TG--SLRLYNIGPQDSGLYRCTASNLLGE 400 (940)
Q Consensus 325 i~~~p~~~~v~~G~~vtL~C~v~g~-P~p~i~W~k~g~~i~~~~~~~i~~-~~--sL~I~~v~~~D~G~YtC~A~N~~G~ 400 (940)
+...|.+..+.+|++++|.|.+.|. |.|.+.|+|++..+....++.+.. .+ +|.|.++..+|+|.|+|.|.|..|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 3445667889999999999999997 999999999999988777777643 33 8999999999999999999999999
Q ss_pred EEEEEEEEEecC
Q psy11143 401 DVAEGYLTVTGE 412 (940)
Q Consensus 401 ~~~s~~L~V~~~ 412 (940)
...++.|.|.+.
T Consensus 84 ~~~~~~l~V~~~ 95 (97)
T 2bk8_A 84 DSSYAELFVKGV 95 (97)
T ss_dssp EEEEEEEEETTT
T ss_pred EeEEEEEEEEec
Confidence 999999998753
No 439
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.29 E-value=1.3e-11 Score=112.83 Aligned_cols=91 Identities=24% Similarity=0.295 Sum_probs=73.6
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEE--e------eeceEEEecCCCCCCeEEEE
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKI--H------RTGSLRLYNIGPQDSGLYRC 392 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i--~------~~~sL~I~~v~~~D~G~YtC 392 (940)
.||.+.... ....+..+.|.|.+.|.|.|.|+|+|+|..+..+.+... . ..++|.|.++..+|+|.|+|
T Consensus 3 ~pP~i~~~~---~~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 79 (103)
T 1wwb_X 3 FAPTITFLE---SPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTL 79 (103)
T ss_dssp CCCCCCCCC---CCCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEE
T ss_pred CCCEEEecc---CceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEE
Confidence 566654221 235688999999999999999999999999887655322 1 23459999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEecCCC
Q psy11143 393 TASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 393 ~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
.|.|..|....++.|.|..+|.
T Consensus 80 ~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 80 IAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp EEECSSCEEEEEEEECCSCCCC
T ss_pred EEEeCCCcEeEEEEEEECCCCC
Confidence 9999999999999999987653
No 440
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.28 E-value=2e-11 Score=126.17 Aligned_cols=161 Identities=19% Similarity=0.285 Sum_probs=107.6
Q ss_pred eeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECC--eecC----------CCCceEEeec-----CeEEEEeeeccCC
Q psy11143 232 FIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG--NSLD----------SDDHVTYEHD-----GFVLVLNGVRESD 294 (940)
Q Consensus 232 ~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g--~~l~----------~~~~~~~~~~-----g~sL~I~~v~~~D 294 (940)
+...|....+.+|++++|.|.+.+.+ +.+.|+|.. ..+. ...++.+..+ ..+|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 34456778899999999999998754 589999853 2111 2345555433 2469999999999
Q ss_pred CeEEEEEEEeCCCC-----------ceeEEEEEEeec----cCCeEEEcCCceeecCCCeEEEEEeecCc-CC-CeEEEE
Q psy11143 295 AGVYNCVAQNSEGS-----------AESVAMIRINGH----RAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PL-PRISWS 357 (940)
Q Consensus 295 sG~YtC~A~N~~Gs-----------~~~s~~l~V~~~----~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~-p~i~W~ 357 (940)
+|.|.|.+.+..+. ......|.|... .+|.+... . ..++|.|.+.+. |. +.|+|+
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~~-------~-~~~~l~C~~~g~~P~~~~v~W~ 154 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFIM-------K-NGTNVACLVKDFYPKEVTISLR 154 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEEE-------E-ETTEEEEEEEEESSSCCEEEEE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEEe-------C-CCCeEEEEEeeEeCCCeEEEEe
Confidence 99999999987431 112346666531 23433321 1 137999999875 54 699999
Q ss_pred eCCeeeccCC-cEEEeeeceEEEecCCC-CCCeEEEEEEEeCCeeEE
Q psy11143 358 KDEAEFVEDR-NHKIHRTGSLRLYNIGP-QDSGLYRCTASNLLGEDV 402 (940)
Q Consensus 358 k~g~~i~~~~-~~~i~~~~sL~I~~v~~-~D~G~YtC~A~N~~G~~~ 402 (940)
++ ..+.... ......++++.+..... +|.|.|+|.|.|..+...
T Consensus 155 ~~-~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~~~ 200 (207)
T 1ypz_E 155 SS-KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSETVH 200 (207)
T ss_dssp CS-SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTEEEE
T ss_pred cC-CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCccEe
Confidence 99 6665432 22223456666655554 678999999999987543
No 441
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.28 E-value=1.9e-11 Score=112.47 Aligned_cols=90 Identities=24% Similarity=0.359 Sum_probs=74.4
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCC---CeEEEEeCCeeecc---CCcEEEe---------eeceEEEecCCCC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPL---PRISWSKDEAEFVE---DRNHKIH---------RTGSLRLYNIGPQ 385 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~---p~i~W~k~g~~i~~---~~~~~i~---------~~~sL~I~~v~~~ 385 (940)
+.|.|+..|.++.+.+|++++|.|.+.|.|. |.|.|+|++..... ..++.+. ..++|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4577888888899999999999999999998 99999998732221 2344432 2468999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 386 DSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 386 D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
|+|.|+|.|.|..|..++++.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999999986
No 442
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.27 E-value=1.4e-11 Score=132.49 Aligned_cols=167 Identities=17% Similarity=0.276 Sum_probs=102.9
Q ss_pred CCceeecCCCcEEEEEEeCCCC--CCeEEEeeC--Ceecc----------------ccCceEEeeec-----eEEEeecc
Q psy11143 145 PFDMRAPAGSSVEIPCKPDGEP--LPRISWSKD--EAEFV----------------EDRNHKIHRTG-----SLRLYNIG 199 (940)
Q Consensus 145 p~~~~v~~Ge~vtL~C~v~g~P--~p~ItW~k~--g~~i~----------------~~~~~~~~~~~-----sL~I~~v~ 199 (940)
+..+.+.+|++++|.|.+.+.+ ...+.|++. +.... ...++.+..+. +|.|.+++
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (263)
T 3iu4_H 7 SGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQ 86 (263)
T ss_dssp ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 3457789999999999997533 468999873 21110 12344443322 49999999
Q ss_pred cCCCceEEEEEEcCCc--------ceeeeeeeeecC---CCCeeeeCCCeeEEecCCeEEEEEEEeee-CC-CeEEEEEC
Q psy11143 200 PQDSGLYRCTASNLLG--------EDVAEGYLTVTG---APPIFIQRPVSTTYSTGSTSRITCLVEGH-PL-PQMTWFHD 266 (940)
Q Consensus 200 ~~DsG~YtC~a~N~~g--------~~s~s~~L~V~~---~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~-p~ItW~k~ 266 (940)
.+|+|.|.|.+.+..+ .......|.|.. .+|.+........+..|+.++|.|.+.+. |. +.|+| +
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~ 164 (263)
T 3iu4_H 87 TDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--N 164 (263)
T ss_dssp GGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--G
T ss_pred HHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--C
Confidence 9999999999987531 112233566642 33444433333345689999999999885 43 58999 5
Q ss_pred CeecCCCC---ceEEeecC-----eEEEEeeeccCCCeEEEEEEEeCCCCceeEEE
Q psy11143 267 GNSLDSDD---HVTYEHDG-----FVLVLNGVRESDAGVYNCVAQNSEGSAESVAM 314 (940)
Q Consensus 267 g~~l~~~~---~~~~~~~g-----~sL~I~~v~~~DsG~YtC~A~N~~Gs~~~s~~ 314 (940)
+..+.... ......++ +.|.|.....+| |.|+|.|.|..+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 219 (263)
T 3iu4_H 165 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 219 (263)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEE
T ss_pred CcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEE
Confidence 54432210 01111122 248888887788 9999999999876544433
No 443
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.27 E-value=1.9e-11 Score=130.49 Aligned_cols=168 Identities=13% Similarity=0.288 Sum_probs=109.4
Q ss_pred eeEEecCCeEEEEEEEeee--CCCeEEEEECC--ee---c--------------CCCCceEEeec----CeEEEEeeecc
Q psy11143 238 STTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---L--------------DSDDHVTYEHD----GFVLVLNGVRE 292 (940)
Q Consensus 238 ~~~v~~G~~v~L~C~v~G~--P~p~ItW~k~g--~~---l--------------~~~~~~~~~~~----g~sL~I~~v~~ 292 (940)
...+.+|++++|.|.+.+. ....+.|++.. .. + ....++.+..+ ..+|.|.+++.
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (256)
T 3sob_H 32 GGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRA 111 (256)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCc
Confidence 4568899999999999763 34689999742 11 1 01234444332 23499999999
Q ss_pred CCCeEEEEEEEeCCC-----------CceeEEEEEEe--eccCCeEEEcCCceeecCCCeEEEEEeecCc-C-CCeEEEE
Q psy11143 293 SDAGVYNCVAQNSEG-----------SAESVAMIRIN--GHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWS 357 (940)
Q Consensus 293 ~DsG~YtC~A~N~~G-----------s~~~s~~l~V~--~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P-~p~i~W~ 357 (940)
+|+|.|.|.+.+..+ .......+.|. ...+|.+...+....+.+|+.++|.|.+.+. | .+.+.|
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W- 190 (256)
T 3sob_H 112 EDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 190 (256)
T ss_dssp GGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE-
T ss_pred ccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE-
Confidence 999999999987531 11122356664 2355666644444456789999999999874 5 347999
Q ss_pred eCCeeecc-----------CCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 358 KDEAEFVE-----------DRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 358 k~g~~i~~-----------~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
++..+.. +..+ ...++|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 191 -~~~~~~~~~~~~~~~~~~~g~~--~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 191 -NSGALTSGVHTFPAVLQSSGLY--SLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp -GGGTBCTTEEECCCEECTTSCE--EEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred -CCcccCCCeEeCCceeCCCCCE--EEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 4433321 1122 223478999999899 99999999998877776666554
No 444
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.27 E-value=8e-11 Score=119.43 Aligned_cols=158 Identities=18% Similarity=0.276 Sum_probs=110.5
Q ss_pred EecCCceeecCCCcEEEEEEeCCCCCCe-EEEeeC-Ceecc-ccCceEEeeeceEEEeecccCCCceEEEEEEcCCccee
Q psy11143 142 VVKPFDMRAPAGSSVEIPCKPDGEPLPR-ISWSKD-EAEFV-EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDV 218 (940)
Q Consensus 142 ~~~p~~~~v~~Ge~vtL~C~v~g~P~p~-ItW~k~-g~~i~-~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s 218 (940)
.+.|....|.+|+++.|.|.+.. +.|. +.|... ++... ... .....|.|.+++. .|.|.|.+.......+
T Consensus 3 ~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~----~~~~~l~l~~vs~--~g~y~C~~~c~~~~~~ 75 (185)
T 1iam_A 3 SVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPG----NNRKVYELSNVQE--DSQPMCYSNCPDGQST 75 (185)
T ss_dssp EEESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSS----SSEEEEEEEEECS--CBCCEEEEECSSCEEE
T ss_pred EEECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccC----CceeEEEEEecCc--CCEEEEEEECCCCceE
Confidence 45566778999999999999974 4454 777531 11111 110 1123588999973 3999999977656678
Q ss_pred eeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeee-CCC--eEEEEECCeecCCCCceEEeecCeEEEEeeeccCCC
Q psy11143 219 AEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGH-PLP--QMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDA 295 (940)
Q Consensus 219 ~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~-P~p--~ItW~k~g~~l~~~~~~~~~~~g~sL~I~~v~~~Ds 295 (940)
..+.|.|...|..+.+.+....+.+|+.++|.|.+.|. |.+ .|+|||++..+....... .....+|++.....+|.
T Consensus 76 ~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~-~~~~~tl~~~~~reD~g 154 (185)
T 1iam_A 76 AKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVG-EPAEVTTTVLVRRDHHG 154 (185)
T ss_dssp EECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT-TTEEEEEEEECCSSCSS
T ss_pred EEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCC-ccccEEEEEeceeccCC
Confidence 88899999777777777777779999999999999984 554 589999999885321000 00112366665555555
Q ss_pred eEEEEEEEeCCC
Q psy11143 296 GVYNCVAQNSEG 307 (940)
Q Consensus 296 G~YtC~A~N~~G 307 (940)
..|+|+|.|..+
T Consensus 155 ~~~sC~A~~~l~ 166 (185)
T 1iam_A 155 AQFSCRTELDLR 166 (185)
T ss_dssp CEEEEEEEEECG
T ss_pred CeEEEEEEecCc
Confidence 599999999876
No 445
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.27 E-value=4.2e-11 Score=107.57 Aligned_cols=88 Identities=19% Similarity=0.392 Sum_probs=75.8
Q ss_pred EEeCCCcEEEecCCeEEEEEEeecc-CCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeCCCc
Q psy11143 48 FIQRPVSTTYSTGSTSRITCLVEGH-PLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGS 124 (940)
Q Consensus 48 ~~~~p~~~~V~eGesv~L~C~v~g~-P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~~g~ 124 (940)
+...|.+..+.+|+.++|.|.+.|. |.+.|.|+|++..+....+..+...+ ..|.|.+++.+|+|.|+|.|.|..|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 4456778899999999999999997 89999999999999877777665333 36899999999999999999999999
Q ss_pred eEEEEEEEEec
Q psy11143 125 AESVAMIRING 135 (940)
Q Consensus 125 ~~~~~~L~V~~ 135 (940)
....+.|.|..
T Consensus 84 ~~~~~~l~V~~ 94 (97)
T 2bk8_A 84 DSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEETT
T ss_pred EeEEEEEEEEe
Confidence 88888888754
No 446
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.27 E-value=2.9e-11 Score=114.64 Aligned_cols=81 Identities=25% Similarity=0.289 Sum_probs=70.0
Q ss_pred ecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEe----------eeceEEEecCCCCCCeEEEEEEEeCCeeEEE
Q psy11143 334 APAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH----------RTGSLRLYNIGPQDSGLYRCTASNLLGEDVA 403 (940)
Q Consensus 334 v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~----------~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~ 403 (940)
...+..+.|.|.+.|+|.|.|+|+|+|..+..+.+..+. ..++|.|.++...|+|.|+|.|.|.+|...+
T Consensus 12 ~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 12 AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 346789999999999999999999999999877654322 2468999999999999999999999999999
Q ss_pred EEEEEEecCCC
Q psy11143 404 EGYLTVTGENS 414 (940)
Q Consensus 404 s~~L~V~~~~~ 414 (940)
++.|.|...|.
T Consensus 92 t~~l~v~~~P~ 102 (126)
T 1he7_A 92 SIMAAFMDNPF 102 (126)
T ss_dssp EEEECCCSCTT
T ss_pred EEEEEEEcCCC
Confidence 99998887654
No 447
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=112.25 Aligned_cols=89 Identities=15% Similarity=0.223 Sum_probs=76.6
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.|...+.++.+.+|+.+.|.|.+ .|.+.|+|+|+|..+..+.++.+..++ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 36788888999999999999999999 788899999999999888887777555 46899999999999999999997
Q ss_pred CCceEEEEEEEEecc
Q psy11143 122 EGSAESVAMIRINGH 136 (940)
Q Consensus 122 ~g~~~~~~~L~V~~~ 136 (940)
....++.|.|...
T Consensus 84 --~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 84 --NVTLPAKVHVISG 96 (100)
T ss_dssp --CCCEEEEEEEECC
T ss_pred --CeeEEEEEEEeCC
Confidence 4456777887653
No 448
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=7.1e-12 Score=113.04 Aligned_cols=91 Identities=24% Similarity=0.482 Sum_probs=76.8
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeC
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
+..+|.+...|....+.+|+.+.|.|.+.|.|.|.|.|+|++..+..... ........|.|.+++.+|+|.|+|.|.|.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS-TCEAGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC-EEETTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce-EeeCCeEEEEECCCChhhCEEEEEEEEEC
Confidence 44578888889999999999999999999999999999999998875433 33334456899999999999999999999
Q ss_pred CCceEEEEEEEE
Q psy11143 122 EGSAESVAMIRI 133 (940)
Q Consensus 122 ~g~~~~~~~L~V 133 (940)
.|.....+.|.|
T Consensus 87 ~g~~~~~~~l~V 98 (99)
T 2yr3_A 87 LGQVSCSAWVTV 98 (99)
T ss_dssp SCEEEEECCEEE
T ss_pred CCeEEEEEEEEE
Confidence 998777766665
No 449
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=2e-11 Score=114.03 Aligned_cols=92 Identities=16% Similarity=0.256 Sum_probs=76.8
Q ss_pred cCCeEEEc---CCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEee---eceEEEecCCCCCCeEEEEEE
Q psy11143 321 RAPRLVVK---PFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHR---TGSLRLYNIGPQDSGLYRCTA 394 (940)
Q Consensus 321 ~~P~i~~~---p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~---~~sL~I~~v~~~D~G~YtC~A 394 (940)
.+|.+... +....+.+|++++|.|.+.|.|.|.|.|+|++..+. ..++.+.. ..+|.|.++..+|+|.|+|.|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 46666542 456788999999999999999999999999999886 33444432 346999999999999999999
Q ss_pred EeCCeeEEEEEEEEEecCC
Q psy11143 395 SNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 395 ~N~~G~~~~s~~L~V~~~~ 413 (940)
.|..|.....+.|.|..+|
T Consensus 99 ~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp ECSSCEECCEEEEEEECCC
T ss_pred EeCCCeEEEEEEEEEEcCC
Confidence 9999999999999998764
No 450
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.26 E-value=1.6e-11 Score=120.64 Aligned_cols=97 Identities=28% Similarity=0.491 Sum_probs=83.9
Q ss_pred EEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEe---eceEEEEcccccCCCeEEEE
Q psy11143 40 VTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH---DGFVLVLNGVRESDAGVYNC 116 (940)
Q Consensus 40 l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~---~gs~L~I~~v~~~DsG~YtC 116 (940)
+.|..+|.+...+....+.+|+.++|.|.+.|.|.+.|.|+|++..+....+..+.. ....|.|.+++.+|+|.|+|
T Consensus 36 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 115 (154)
T 1fhg_A 36 EKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTC 115 (154)
T ss_dssp CCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEE
T ss_pred ccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEE
Confidence 455567899999999999999999999999999999999999999998777666652 23468999999999999999
Q ss_pred EEEeCCCceEEEEEEEEecc
Q psy11143 117 VAQNSEGSAESVAMIRINGH 136 (940)
Q Consensus 117 ~a~n~~g~~~~~~~L~V~~~ 136 (940)
.|.|..|.....+.|.|...
T Consensus 116 ~a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 116 KAVNSLGEATCTAELLVETM 135 (154)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEECCCeEEEEEEEEEeCc
Confidence 99999999888888888753
No 451
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=9.3e-12 Score=114.45 Aligned_cols=95 Identities=27% Similarity=0.527 Sum_probs=80.8
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEe---eceEEEEcccccCCCeEEEEEEEe
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH---DGFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~---~gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
.+|.+...|..+.+.+|+.++|.|.+.+.|.+.|.|+|++..+.......+.. ....|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 47889999999999999999999999999999999999999887665544331 234789999999999999999999
Q ss_pred CCCceEEEEEEEEecccC
Q psy11143 121 SEGSAESVAMIRINGHRA 138 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~~~~ 138 (940)
..|.....+.|.|...+.
T Consensus 88 ~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKES 105 (110)
T ss_dssp SSCEEEECCEEEEECCCC
T ss_pred CCCEEEEEEEEEEeCCCC
Confidence 999988888888876443
No 452
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.25 E-value=3.5e-11 Score=108.02 Aligned_cols=87 Identities=18% Similarity=0.229 Sum_probs=73.5
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.|...+.++.+.+|+.++|.|.+.+ +.+.|.|+|||..|..+.++++..++ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 4678889999999999999999999976 45789999999999887788777555 46899999999999999999763
Q ss_pred CCceEEEEEEEEec
Q psy11143 122 EGSAESVAMIRING 135 (940)
Q Consensus 122 ~g~~~~~~~L~V~~ 135 (940)
..++.|.|..
T Consensus 83 ----~~sa~L~V~~ 92 (93)
T 1waa_A 83 ----KSAANLKVKE 92 (93)
T ss_dssp ----EEEEEEEEEC
T ss_pred ----cEEEEEEEEc
Confidence 4566777653
No 453
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.25 E-value=2.6e-11 Score=108.92 Aligned_cols=90 Identities=26% Similarity=0.487 Sum_probs=75.6
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCC--CCeEEEee--ceEEEEcccccCCCeEEEEEEEe
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSD--DHVTYEHD--GFVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~--~~~~~~~~--gs~L~I~~v~~~DsG~YtC~a~n 120 (940)
||.+...|....+.+|+.+.|.|.+.+.|.+.|.|+|++..+... .++.+... ...|.|.+++.+|+|.|+|.|.|
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 84 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEe
Confidence 567777788899999999999999999999999999999988643 34444432 25689999999999999999999
Q ss_pred CCCceEEEEEEEEe
Q psy11143 121 SEGSAESVAMIRIN 134 (940)
Q Consensus 121 ~~g~~~~~~~L~V~ 134 (940)
..|.....+.|.|.
T Consensus 85 ~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 85 EFGSDSATVNIHIR 98 (100)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99987777777775
No 454
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.24 E-value=2.5e-11 Score=127.03 Aligned_cols=167 Identities=14% Similarity=0.235 Sum_probs=109.8
Q ss_pred CCeeEEecCCeEEEEEEEeee--CCCeEEEEECC--ee---c--------------CCCCceEEeec----CeEEEEeee
Q psy11143 236 PVSTTYSTGSTSRITCLVEGH--PLPQMTWFHDG--NS---L--------------DSDDHVTYEHD----GFVLVLNGV 290 (940)
Q Consensus 236 p~~~~v~~G~~v~L~C~v~G~--P~p~ItW~k~g--~~---l--------------~~~~~~~~~~~----g~sL~I~~v 290 (940)
+....+.+|++++|.|.+.+. +...+.|++.. .. + ....++.+..+ ..+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 335778899999999999763 35689999842 11 1 01134444322 234999999
Q ss_pred ccCCCeEEEEEEEeCCC---------CceeEEEEEEee--ccCCeEEEcCCceeecCCCeEEEEEeecCc-C-CCeEEEE
Q psy11143 291 RESDAGVYNCVAQNSEG---------SAESVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-P-LPRISWS 357 (940)
Q Consensus 291 ~~~DsG~YtC~A~N~~G---------s~~~s~~l~V~~--~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P-~p~i~W~ 357 (940)
+.+|+|.|.|.+.+..+ .......+.|.. ..+|.+...+....+..|..++|.|.+.+. | .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W- 165 (226)
T 3mlr_H 87 QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 165 (226)
T ss_dssp CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE-
T ss_pred CcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE-
Confidence 99999999999987531 001123455532 356666644444456789999999999885 4 348999
Q ss_pred eCCeeec-----------cCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy11143 358 KDEAEFV-----------EDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYL 407 (940)
Q Consensus 358 k~g~~i~-----------~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L 407 (940)
++..+. .++.+. ..++|.|.....+| |.|+|.|.|..+.......|
T Consensus 166 -~~~~~~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 166 -NSGALTSGVHTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 222 (226)
T ss_dssp -GGGTCCTTEEECCCEECTTSCEE--EEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred -CCccccCCeEeCCcEECCCCCEE--EEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEEc
Confidence 333221 112222 23478999998889 99999999998876554443
No 455
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.24 E-value=1.8e-11 Score=109.77 Aligned_cols=87 Identities=18% Similarity=0.347 Sum_probs=74.6
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEG 123 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g 123 (940)
.||.+...|....+.+|+.+.|.|.+.|.| +.|.|+|+|..+....+..+. +..|.|.+++.+|+|.|+|.|.|..|
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~--~~~L~i~~~~~~D~G~Y~C~a~n~~g 84 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT--GEEVEVRDSIPADSGLYACVTSSPSG 84 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC--SSEEEESSCCGGGSEEEEEEEEETTE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe--CCEEEECCCChHHCEEEEEEeccCCC
Confidence 466777788889999999999999999987 799999999998766655443 55789999999999999999999999
Q ss_pred ceEEEEEEEE
Q psy11143 124 SAESVAMIRI 133 (940)
Q Consensus 124 ~~~~~~~L~V 133 (940)
.....+.|.|
T Consensus 85 ~~~~~~~l~V 94 (95)
T 2ckn_A 85 SDTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 8777777765
No 456
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.24 E-value=1.7e-12 Score=122.23 Aligned_cols=102 Identities=25% Similarity=0.347 Sum_probs=83.7
Q ss_pred eeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCe-EEEEeCCeeecc--CCcEEEe--e-----eceEEE
Q psy11143 310 ESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPR-ISWSKDEAEFVE--DRNHKIH--R-----TGSLRL 379 (940)
Q Consensus 310 ~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~-i~W~k~g~~i~~--~~~~~i~--~-----~~sL~I 379 (940)
+..+.|.| ..+|.+.. +....+.+|+.+.|.|.+.|.|.|. |.|++++..+.. ..++.+. . .++|.|
T Consensus 4 ~~~~~l~V--~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I 80 (122)
T 2cry_A 4 GSSGTLTV--NGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTI 80 (122)
T ss_dssp SCCCCCCC--CSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEEC
T ss_pred ceEEEEEE--ecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEE
Confidence 33444444 47888888 7788899999999999999999997 999999988864 3555552 1 338999
Q ss_pred ecCCCCCC-eEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 380 YNIGPQDS-GLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 380 ~~v~~~D~-G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
.++..+|. |.|+|.|.|..|.....+.|.|++++.
T Consensus 81 ~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 116 (122)
T 2cry_A 81 SNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEM 116 (122)
T ss_dssp TTCCHHHHHSCEEEEEECSSCEEEEEECCCCSCSSC
T ss_pred cCCChhhCCceEEEEEECCCCeEEEEEEEEECCCCC
Confidence 99999999 999999999999999999999887643
No 457
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.2e-11 Score=112.13 Aligned_cols=95 Identities=26% Similarity=0.505 Sum_probs=80.2
Q ss_pred eCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecC-CCCeEEEe--ec-eEEEEcccccCCCeEEEEEE
Q psy11143 43 NAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDS-DDHVTYEH--DG-FVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 43 ~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~-~~~~~~~~--~g-s~L~I~~v~~~DsG~YtC~a 118 (940)
..+|.+...+....+.+|+.++|.|.+.|.|.+.|.|+|++..+.. ..++.+.. ++ ..|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 3578888888999999999999999999999999999999998875 34455542 23 26899999999999999999
Q ss_pred EeCCCceEEEEEEEEeccc
Q psy11143 119 QNSEGSAESVAMIRINGHR 137 (940)
Q Consensus 119 ~n~~g~~~~~~~L~V~~~~ 137 (940)
.|..|.....+.|.|...+
T Consensus 86 ~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp ECTTCCEEECCCEEEECCS
T ss_pred EECCCeEEEEEEEEEECCC
Confidence 9999998888888887643
No 458
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.23 E-value=3.4e-11 Score=111.49 Aligned_cols=101 Identities=20% Similarity=0.401 Sum_probs=85.0
Q ss_pred CCceeEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCC
Q psy11143 307 GSAESVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIG 383 (940)
Q Consensus 307 Gs~~~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~ 383 (940)
|....++.|.|.. .||.+...+.+..+.+|++++|.|.+.+. |.+.|+|++..+..+.++.+..++ +|.|.++.
T Consensus 5 g~~~~~~~l~V~~-~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~ 81 (113)
T 2edh_A 5 SSGRTSAMLTVRA-LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLV 81 (113)
T ss_dssp CCCCCCCCCCCCC-SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCC
T ss_pred CCCcEEEEEEEEc-CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCC
Confidence 4444555666653 46788888888999999999999999875 789999999999888888887777 89999999
Q ss_pred CCCCeEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 384 PQDSGLYRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 384 ~~D~G~YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
.+|+|.|+|.| |....++.|.|..+|.
T Consensus 82 ~~D~G~Y~C~a----~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 82 AEDAGEYLCMC----GKERTSAMLTVRAMPS 108 (113)
T ss_dssp STTCEEEEEEE----TTEEEEEEEEECCCCC
T ss_pred hhhCEEEEEEe----CCCCEEEEEEEeCCCC
Confidence 99999999999 7788889999988754
No 459
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.23 E-value=1e-11 Score=114.20 Aligned_cols=91 Identities=27% Similarity=0.534 Sum_probs=79.8
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEee--ceEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHD--GFVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~--gs~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.|...|..+.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+....+..+... ...|.|.+++.+|+|.|+|.|.|.
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 92 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENS 92 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCS
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeC
Confidence 467888999999999999999999999999999999999999877766666532 456899999999999999999999
Q ss_pred CCceEEEEEEEEe
Q psy11143 122 EGSAESVAMIRIN 134 (940)
Q Consensus 122 ~g~~~~~~~L~V~ 134 (940)
.|.....+.|.|.
T Consensus 93 ~G~~~~~~~l~V~ 105 (106)
T 1nct_A 93 EGKQEAEFTLTIQ 105 (106)
T ss_dssp SCBCCEEEEEEEC
T ss_pred CCeEEEEEEEEEE
Confidence 9998888877764
No 460
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.9e-11 Score=112.14 Aligned_cols=91 Identities=22% Similarity=0.329 Sum_probs=74.8
Q ss_pred CCCeEEe---CCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEe--eceEEEEcccccCCCeEEEEEE
Q psy11143 44 APPIFIQ---RPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH--DGFVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 44 ~pP~~~~---~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~--~gs~L~I~~v~~~DsG~YtC~a 118 (940)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.|.|.|+|+|..+. ..+..+.. ....|.|.+++.+|+|.|+|.|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 4566654 3567889999999999999999999999999999987 34444442 2345899999999999999999
Q ss_pred EeCCCceEEEEEEEEec
Q psy11143 119 QNSEGSAESVAMIRING 135 (940)
Q Consensus 119 ~n~~g~~~~~~~L~V~~ 135 (940)
.|..|.....+.|.|..
T Consensus 99 ~N~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVE 115 (118)
T ss_dssp ECSSCEECCEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEEc
Confidence 99999877788787765
No 461
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.22 E-value=4.5e-11 Score=111.70 Aligned_cols=95 Identities=19% Similarity=0.175 Sum_probs=75.5
Q ss_pred EeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEe-------eeceEEEecCCCCCCeE
Q psy11143 317 INGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH-------RTGSLRLYNIGPQDSGL 389 (940)
Q Consensus 317 V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~-------~~~sL~I~~v~~~D~G~ 389 (940)
+.+..||.+...+. . .......|.|.+.|.|.|.+.|+|+|..+..+.+..+. ..++|.|.++..+|+|.
T Consensus 3 L~V~~pP~i~~~~~-~--~~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 79 (118)
T 1wwc_A 3 LTVYYPPRVVSLEE-P--ELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGN 79 (118)
T ss_dssp -CCCCCCCCCCCCC-C--CCCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred EEEecCCceeccCC-C--eeccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEE
Confidence 34446777655432 1 23367889999999999999999999998877655543 35689999999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEecCCC
Q psy11143 390 YRCTASNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 390 YtC~A~N~~G~~~~s~~L~V~~~~~ 414 (940)
|+|.|.|..|...+++.|.|...|.
T Consensus 80 Y~C~a~N~~G~~~~~~~l~v~~~P~ 104 (118)
T 1wwc_A 80 YTLIAKNPLGTANQTINGHFLKEPF 104 (118)
T ss_dssp EEEEEEETTEEEEEEEEECCSCCCC
T ss_pred EEEEEECCCCeEeeEEEEEEccCCC
Confidence 9999999999999999998887653
No 462
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.21 E-value=3.1e-11 Score=108.92 Aligned_cols=88 Identities=28% Similarity=0.482 Sum_probs=72.4
Q ss_pred CCeEEEcC----CceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCc---EEEe-eeceEEEecCCCCCCeEEEEE
Q psy11143 322 APRLVVKP----FDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRN---HKIH-RTGSLRLYNIGPQDSGLYRCT 393 (940)
Q Consensus 322 ~P~i~~~p----~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~---~~i~-~~~sL~I~~v~~~D~G~YtC~ 393 (940)
+|.+...+ ..+.+.+|++++|.|.+.|.|.|.+.|+|++..+....+ +... ..++|.|.++..+|+|.|+|.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 83 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 83 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEE
Confidence 55565444 346788999999999999999999999999998865432 2222 345899999999999999999
Q ss_pred EEeCCeeEEEEEEEEE
Q psy11143 394 ASNLLGEDVAEGYLTV 409 (940)
Q Consensus 394 A~N~~G~~~~s~~L~V 409 (940)
|.|..|....++.|.|
T Consensus 84 a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 84 VENEYGSINHTYHLDV 99 (100)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEeCCCEEEEEEEEEE
Confidence 9999999999888877
No 463
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=2.4e-11 Score=117.69 Aligned_cols=82 Identities=22% Similarity=0.389 Sum_probs=70.1
Q ss_pred CCceeecCCCeEEEEEeecCcCCCeEEEEeCC----------------------------eee-ccCCcEEEeeec---e
Q psy11143 329 PFDMRAPAGSSVEIPCKPDGEPLPRISWSKDE----------------------------AEF-VEDRNHKIHRTG---S 376 (940)
Q Consensus 329 p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g----------------------------~~i-~~~~~~~i~~~~---s 376 (940)
|.++.+.+|++++|.|.+.|.|.|.|+|+|++ ..+ ....++.+...+ +
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 56778999999999999999999999999998 444 234555555443 6
Q ss_pred EEEecCCCCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy11143 377 LRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTVT 410 (940)
Q Consensus 377 L~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~V~ 410 (940)
|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999999999885
No 464
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.21 E-value=2.4e-10 Score=115.85 Aligned_cols=157 Identities=15% Similarity=0.246 Sum_probs=104.9
Q ss_pred eCCCeeEEecCCeEEEEEEEeeeCCCe-EEEEEC-CeecC-CCCceEEeecCeEEEEeeeccCCCeEEEEEEEeCCCCce
Q psy11143 234 QRPVSTTYSTGSTSRITCLVEGHPLPQ-MTWFHD-GNSLD-SDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGSAE 310 (940)
Q Consensus 234 ~~p~~~~v~~G~~v~L~C~v~G~P~p~-ItW~k~-g~~l~-~~~~~~~~~~g~sL~I~~v~~~DsG~YtC~A~N~~Gs~~ 310 (940)
+.|....|.+|+++.|.|.+.. +.|. +.|.-. ++... ... .....|.|.+++. | |.|.|.+.+.....+
T Consensus 4 v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~-----~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~ 75 (185)
T 1iam_A 4 VSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPG-----NNRKVYELSNVQE-D-SQPMCYSNCPDGQST 75 (185)
T ss_dssp EESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSS-----SSEEEEEEEEECS-C-BCCEEEEECSSCEEE
T ss_pred EECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccC-----CceeEEEEEecCc-C-CEEEEEEECCCCceE
Confidence 4466678999999999999964 4454 677521 11111 100 1113489999984 3 999999977655566
Q ss_pred eEEEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC--eEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCC
Q psy11143 311 SVAMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP--RISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDS 387 (940)
Q Consensus 311 ~s~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p--~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~ 387 (940)
..+.|.|.. .|..+.+.+....+.+|+.++|.|.+.|. |.+ .|+|+|++..+..........+.+|.+.....+|.
T Consensus 76 ~~~~l~V~~-~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~~~~reD~g 154 (185)
T 1iam_A 76 AKTFLTVYW-TPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHG 154 (185)
T ss_dssp EECEEEEEB-CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSS
T ss_pred EEEEEEEeC-CCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEEeceeccCC
Confidence 666677764 34455666665669999999999999985 543 59999999887532100001122577665555555
Q ss_pred eEEEEEEEeCCe
Q psy11143 388 GLYRCTASNLLG 399 (940)
Q Consensus 388 G~YtC~A~N~~G 399 (940)
..|+|.|.|..+
T Consensus 155 ~~~sC~A~~~l~ 166 (185)
T 1iam_A 155 AQFSCRTELDLR 166 (185)
T ss_dssp CEEEEEEEEECG
T ss_pred CeEEEEEEecCc
Confidence 599999999876
No 465
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=4.9e-11 Score=113.12 Aligned_cols=90 Identities=19% Similarity=0.235 Sum_probs=74.4
Q ss_pred CCeEEEcCCceeecCCCeEEEEEeecCc---CCCeEEEEeCCee-ec--cCCcEEEe---------eeceEEEecCCCCC
Q psy11143 322 APRLVVKPFDMRAPAGSSVEIPCKPDGE---PLPRISWSKDEAE-FV--EDRNHKIH---------RTGSLRLYNIGPQD 386 (940)
Q Consensus 322 ~P~i~~~p~~~~v~~G~~vtL~C~v~g~---P~p~i~W~k~g~~-i~--~~~~~~i~---------~~~sL~I~~v~~~D 386 (940)
.|.|+..|.++.+.+|++++|.|.+.|. |.|.|.|+|++.. +. ...++.+. ...+|.|.+++.+|
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 4667888889999999999999999875 8999999997421 11 12344442 14689999999999
Q ss_pred CeEEEEEEEeCCeeEEEEEEEEEec
Q psy11143 387 SGLYRCTASNLLGEDVAEGYLTVTG 411 (940)
Q Consensus 387 ~G~YtC~A~N~~G~~~~s~~L~V~~ 411 (940)
+|.|+|+|.|..|..++.+.|.|..
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999999999999999998
No 466
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.20 E-value=5.4e-11 Score=108.27 Aligned_cols=88 Identities=17% Similarity=0.233 Sum_probs=74.6
Q ss_pred CCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCC--cEEEeee---ceEEEecCCCCCCeEEEEEEEe
Q psy11143 322 APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR--NHKIHRT---GSLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 322 ~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~--~~~i~~~---~sL~I~~v~~~D~G~YtC~A~N 396 (940)
|+.|...+.++.+.+|++++|.|.+.+ |.+.+.|+|++..+.... ++.+... .+|.|.++..+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 444677778889999999999999988 779999999999988776 5566654 4799999999999999999998
Q ss_pred CCeeEEEEEEEEEecCCC
Q psy11143 397 LLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~~~~ 414 (940)
...++.|.|..++.
T Consensus 86 ----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSG 99 (103)
T ss_dssp ----EEEEEEEEEECCCS
T ss_pred ----CcEEEEEEEeCCCC
Confidence 56778899988754
No 467
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=4.2e-11 Score=108.81 Aligned_cols=89 Identities=19% Similarity=0.328 Sum_probs=78.1
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.||.+...+.+..+.+|++++|.|.+.+ |.+.+.|+|++..+....++.+..++ +|.|.++..+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 5788888888899999999999999997 88899999999998877788777665 699999999999999999999
Q ss_pred CeeEEEEEEEEEecCCC
Q psy11143 398 LGEDVAEGYLTVTGENS 414 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~~~ 414 (940)
...++.|.|..+|.
T Consensus 85 ---~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 85 ---SKSTASLHVEEKAS 98 (103)
T ss_dssp ---CEEEEEEEECCCSS
T ss_pred ---CCcEEEEEEeCCCC
Confidence 36678899987754
No 468
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.19 E-value=3.8e-11 Score=108.25 Aligned_cols=89 Identities=22% Similarity=0.547 Sum_probs=72.2
Q ss_pred CCeEEeCC----CcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCC---eEEEeeceEEEEcccccCCCeEEEEE
Q psy11143 45 PPIFIQRP----VSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDH---VTYEHDGFVLVLNGVRESDAGVYNCV 117 (940)
Q Consensus 45 pP~~~~~p----~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~---~~~~~~gs~L~I~~v~~~DsG~YtC~ 117 (940)
+|.|...| ....+.+|+.+.|.|.+.|.|.+.|.|+|+|..+..... ......+..|.|.+++.+|+|.|+|.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 83 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 83 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEE
Confidence 45555443 467889999999999999999999999999998865432 34444555789999999999999999
Q ss_pred EEeCCCceEEEEEEEE
Q psy11143 118 AQNSEGSAESVAMIRI 133 (940)
Q Consensus 118 a~n~~g~~~~~~~L~V 133 (940)
|.|..|.....+.|.|
T Consensus 84 a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 84 VENEYGSINHTYHLDV 99 (100)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEeCCCEEEEEEEEEE
Confidence 9999998777777765
No 469
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.19 E-value=9.1e-11 Score=107.16 Aligned_cols=93 Identities=22% Similarity=0.315 Sum_probs=71.6
Q ss_pred EeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEE--E-----eeceEEEEcccccCCCeEE
Q psy11143 42 VNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTY--E-----HDGFVLVLNGVRESDAGVY 114 (940)
Q Consensus 42 V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~--~-----~~gs~L~I~~v~~~DsG~Y 114 (940)
|..||.+..... ...|+.+.|.|.+.|.|.|.|+|+|+|..+........ . .....|.|.+++.+|+|.|
T Consensus 1 V~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 77 (103)
T 1wwb_X 1 VHFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDY 77 (103)
T ss_dssp CCCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred CCCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEE
Confidence 345666532221 24688999999999999999999999999987655322 1 1123489999999999999
Q ss_pred EEEEEeCCCceEEEEEEEEeccc
Q psy11143 115 NCVAQNSEGSAESVAMIRINGHR 137 (940)
Q Consensus 115 tC~a~n~~g~~~~~~~L~V~~~~ 137 (940)
+|.|.|..|....++.|.|...+
T Consensus 78 ~C~A~N~~G~~~~~~~l~V~~~P 100 (103)
T 1wwb_X 78 TLIAKNEYGKDEKQISAHFMGWP 100 (103)
T ss_dssp EEEEECSSCEEEEEEEECCSCCC
T ss_pred EEEEEeCCCcEeEEEEEEECCCC
Confidence 99999999998888888876543
No 470
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.18 E-value=1.3e-10 Score=106.84 Aligned_cols=90 Identities=19% Similarity=0.325 Sum_probs=72.1
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCC---CeEEEEECCEeec---CCCCeEEEe--------eceEEEEcccccCC
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPL---PQMTWFHDGNSLD---SDDHVTYEH--------DGFVLVLNGVRESD 110 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~---p~V~W~kdg~~I~---~~~~~~~~~--------~gs~L~I~~v~~~D 110 (940)
.|.|...|..+.+.+|+.++|.|.+.|.|. |.|.|+|++.... ...++.+.. ....|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 578888999999999999999999999988 9999999873221 112333321 23568999999999
Q ss_pred CeEEEEEEEeCCCceEEEEEEEEe
Q psy11143 111 AGVYNCVAQNSEGSAESVAMIRIN 134 (940)
Q Consensus 111 sG~YtC~a~n~~g~~~~~~~L~V~ 134 (940)
+|.|+|.|.|..|.....+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999998888888874
No 471
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=5.8e-11 Score=107.39 Aligned_cols=83 Identities=22% Similarity=0.409 Sum_probs=72.7
Q ss_pred CCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEEE
Q psy11143 329 PFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLT 408 (940)
Q Consensus 329 p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L~ 408 (940)
|..+.+.+|+.++|.|.+.|.| |.|.|+|++..+....++.+. .++|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 87 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT-GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC-SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEEC
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE-CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEE
Confidence 4456788999999999999987 799999999988777676665 67999999999999999999999999998888888
Q ss_pred EecCC
Q psy11143 409 VTGEN 413 (940)
Q Consensus 409 V~~~~ 413 (940)
|...+
T Consensus 88 V~~~~ 92 (99)
T 2cr3_A 88 VSDAL 92 (99)
T ss_dssp BCSCC
T ss_pred EecCC
Confidence 87654
No 472
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.17 E-value=1.8e-10 Score=124.00 Aligned_cols=171 Identities=12% Similarity=0.275 Sum_probs=108.5
Q ss_pred CCcEEEecCCeEEEEEEeec--cCCCeEEEEECC--E---ee---cC-----------CCCeEEEe----eceEEEEccc
Q psy11143 52 PVSTTYSTGSTSRITCLVEG--HPLPQMTWFHDG--N---SL---DS-----------DDHVTYEH----DGFVLVLNGV 106 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g--~P~p~V~W~kdg--~---~I---~~-----------~~~~~~~~----~gs~L~I~~v 106 (940)
|..+.+.+|++|+|.|.+.+ .....+.|||.. . .+ .. ..++.+.. ....|.|.++
T Consensus 30 ~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (267)
T 3u1s_H 30 SGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGL 109 (267)
T ss_dssp CCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSC
T ss_pred eCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 34577999999999999965 344689999742 1 11 00 12344332 2245899999
Q ss_pred ccCCCeEEEEEEEe------CCC------------c-eE------EEEEEEEec--ccCCeeEecCCceeecCCCcEEEE
Q psy11143 107 RESDAGVYNCVAQN------SEG------------S-AE------SVAMIRING--HRAPRLVVKPFDMRAPAGSSVEIP 159 (940)
Q Consensus 107 ~~~DsG~YtC~a~n------~~g------------~-~~------~~~~L~V~~--~~~P~~~~~p~~~~v~~Ge~vtL~ 159 (940)
+.+|+|.|.|.+.+ ..+ . .. ..+.|.|.. ...|.+...+....+.+|+.++|.
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l~ 189 (267)
T 3u1s_H 110 TADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALG 189 (267)
T ss_dssp CGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEEEEE
T ss_pred ChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcEEEE
Confidence 99999999999962 101 0 10 134566642 234555543333344679999999
Q ss_pred EEeCC-CC-CCeEEEeeCCeecccc---------CceEEeeeceEEEeecccCCCceEEEEEEcCCcceeeeeeeee
Q psy11143 160 CKPDG-EP-LPRISWSKDEAEFVED---------RNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYLTV 225 (940)
Q Consensus 160 C~v~g-~P-~p~ItW~k~g~~i~~~---------~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~~s~s~~L~V 225 (940)
|.+.+ .| .+.++| ++..+... ....+...+.|.|.....+| +.|+|.+.+..+.......+.+
T Consensus 190 C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 190 CLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 99987 45 458999 44433211 11122233468898888888 9999999998766555555544
No 473
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=4.7e-11 Score=108.67 Aligned_cols=89 Identities=22% Similarity=0.353 Sum_probs=75.5
Q ss_pred cCCeEEEcCCc---eeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEE
Q psy11143 321 RAPRLVVKPFD---MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTA 394 (940)
Q Consensus 321 ~~P~i~~~p~~---~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A 394 (940)
.+|.+...|.. +.+.+|++++|.|.+.+.|.| +.|+|++..+....++.+...+ +|.|.+++.+|+|.|+|.|
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 46777777766 788999999999999999999 9999999998877777766544 6999999999999999999
Q ss_pred EeCCeeEEEEEEEEEecCCC
Q psy11143 395 SNLLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 395 ~N~~G~~~~s~~L~V~~~~~ 414 (940)
.|..+ .+.|.|..+|.
T Consensus 85 ~n~~~----~~~l~V~~~P~ 100 (104)
T 2e6p_A 85 EGVSA----FFGVTVQDPSG 100 (104)
T ss_dssp SSCCC----CEEEEEECCCC
T ss_pred CCceE----EEEEEEcCCCC
Confidence 99754 67788887764
No 474
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=3.4e-11 Score=112.95 Aligned_cols=91 Identities=20% Similarity=0.236 Sum_probs=74.2
Q ss_pred CCeEEEcCCceeecCCCeEEEEEeecCc---CCCeEEEEeCCe-eecc--CCcEEEe---------eeceEEEecCCCCC
Q psy11143 322 APRLVVKPFDMRAPAGSSVEIPCKPDGE---PLPRISWSKDEA-EFVE--DRNHKIH---------RTGSLRLYNIGPQD 386 (940)
Q Consensus 322 ~P~i~~~p~~~~v~~G~~vtL~C~v~g~---P~p~i~W~k~g~-~i~~--~~~~~i~---------~~~sL~I~~v~~~D 386 (940)
.+.|+..|.++.+.+|++++|.|.+.|. |.|.|.|+|++. .+.. ..++.+. .+.+|.|.++..+|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4567777888999999999999999875 789999999742 1111 2333432 14689999999999
Q ss_pred CeEEEEEEEeCCeeEEEEEEEEEecC
Q psy11143 387 SGLYRCTASNLLGEDVAEGYLTVTGE 412 (940)
Q Consensus 387 ~G~YtC~A~N~~G~~~~s~~L~V~~~ 412 (940)
+|.|+|+|+|..|..++.+.|.|.++
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEECC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 99999999999999999999999875
No 475
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.17 E-value=5e-11 Score=104.90 Aligned_cols=78 Identities=22% Similarity=0.385 Sum_probs=66.9
Q ss_pred CceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy11143 330 FDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNLLGEDVAEGY 406 (940)
Q Consensus 330 ~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~ 406 (940)
.++.+.+|++++|.|.+.+ |.|.|+|+|+|..+..+.++.+...+ +|.|.++..+|+|.|+|.|.|. ..++.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~ 78 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFL 78 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEE
Confidence 4678899999999999976 99999999999999888888776654 6999999999999999998664 55677
Q ss_pred EEEecC
Q psy11143 407 LTVTGE 412 (940)
Q Consensus 407 L~V~~~ 412 (940)
|.|.+|
T Consensus 79 l~V~eP 84 (84)
T 2lu7_A 79 VSVEEP 84 (84)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 888754
No 476
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=103.48 Aligned_cols=84 Identities=18% Similarity=0.362 Sum_probs=71.4
Q ss_pred CCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeE
Q psy11143 322 APRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGED 401 (940)
Q Consensus 322 ~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~ 401 (940)
++.+...|....+.+|++++|.|.+.|.|.|.|.|+|++..+.... .++|.|.+++.+|+|.|+|.|.|..|..
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 76 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------KKLYMVPYVDLEHQGTYWCHVYNDRDSQ 76 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC------SSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC------CCeEEECCCCHHhCEEEEEEEEcCCCCE
Confidence 4667777888889999999999999999999999999998876543 3589999999999999999999999975
Q ss_pred E-EEEEEEEec
Q psy11143 402 V-AEGYLTVTG 411 (940)
Q Consensus 402 ~-~s~~L~V~~ 411 (940)
. ..+.|.|.+
T Consensus 77 ~s~~~~l~V~~ 87 (91)
T 3bfo_A 77 DSKKVEIIIDE 87 (91)
T ss_dssp ECCCEEEEEC-
T ss_pred EeeeEEEEEeh
Confidence 5 456777754
No 477
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.16 E-value=1.3e-10 Score=104.61 Aligned_cols=81 Identities=25% Similarity=0.466 Sum_probs=68.2
Q ss_pred cCCceeecCCCeEEEEEeec-CcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEE
Q psy11143 328 KPFDMRAPAGSSVEIPCKPD-GEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGY 406 (940)
Q Consensus 328 ~p~~~~v~~G~~vtL~C~v~-g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~ 406 (940)
.+....+.+|++++|.|.+. +.|.|.+.|+|++....... ....+++|.|.+++.+|+|.|+|.|.|..|....++.
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTAT 93 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--eecCCCEEEEeCCChhhCEEEEEEecCCCCccccEEE
Confidence 34567899999999999998 78999999999764433222 3345679999999999999999999999999999999
Q ss_pred EEEe
Q psy11143 407 LTVT 410 (940)
Q Consensus 407 L~V~ 410 (940)
|.|+
T Consensus 94 l~V~ 97 (98)
T 1gl4_B 94 LHVQ 97 (98)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9886
No 478
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1.4e-10 Score=110.09 Aligned_cols=91 Identities=18% Similarity=0.344 Sum_probs=72.9
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeecc---CCCeEEEEECCEe-ec--CCCCeEEEe--------eceEEEEcccccCC
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGH---PLPQMTWFHDGNS-LD--SDDHVTYEH--------DGFVLVLNGVRESD 110 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~---P~p~V~W~kdg~~-I~--~~~~~~~~~--------~gs~L~I~~v~~~D 110 (940)
.+.|...|.++.|.+|+.++|.|.+.+. |.|.|+|||+... +. ...++.+.. ....|.|.+++.+|
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 3678889999999999999999999874 8899999997421 11 123344321 13568999999999
Q ss_pred CeEEEEEEEeCCCceEEEEEEEEec
Q psy11143 111 AGVYNCVAQNSEGSAESVAMIRING 135 (940)
Q Consensus 111 sG~YtC~a~n~~g~~~~~~~L~V~~ 135 (940)
+|.|+|+|.|..|..+..+.|+|.+
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999999888889999987
No 479
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1.1e-10 Score=106.10 Aligned_cols=89 Identities=18% Similarity=0.379 Sum_probs=72.6
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCC--CeEEEeec--eEEEEcccccCCCeEEEEEEEe
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDD--HVTYEHDG--FVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~--~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n 120 (940)
|+.|...+.++.+.+|+.++|.|.+.+ |.+.|.|+|++..+.... ++++..++ ..|.|.+++.+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 445777888999999999999999987 668999999999998776 44666443 5689999999999999999976
Q ss_pred CCCceEEEEEEEEecccC
Q psy11143 121 SEGSAESVAMIRINGHRA 138 (940)
Q Consensus 121 ~~g~~~~~~~L~V~~~~~ 138 (940)
....+.|.|...+.
T Consensus 86 ----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSG 99 (103)
T ss_dssp ----EEEEEEEEEECCCS
T ss_pred ----CcEEEEEEEeCCCC
Confidence 45677788776443
No 480
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.16 E-value=4.8e-11 Score=106.75 Aligned_cols=84 Identities=24% Similarity=0.326 Sum_probs=67.0
Q ss_pred cCCeEEEcCCce--eecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEE
Q psy11143 321 RAPRLVVKPFDM--RAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTAS 395 (940)
Q Consensus 321 ~~P~i~~~p~~~--~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~ 395 (940)
.||.|+.++.+. .+.+|++++|.|.+.+ |.|.++|+|+|..+..+.++.+..++ +|.|.++..+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 456565555544 4568999999999976 88999999999999888888877665 79999999999999999997
Q ss_pred eCCeeEEEEEEEEE
Q psy11143 396 NLLGEDVAEGYLTV 409 (940)
Q Consensus 396 N~~G~~~~s~~L~V 409 (940)
|. ..++.|+|
T Consensus 82 n~----~~~~~ltV 91 (91)
T 2lvc_A 82 DE----CAYFTVTI 91 (91)
T ss_dssp SC----EEEEEEEC
T ss_pred ce----EEEEEEEC
Confidence 75 44555543
No 481
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.15 E-value=8.3e-11 Score=103.50 Aligned_cols=79 Identities=27% Similarity=0.521 Sum_probs=65.8
Q ss_pred CCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeCCCceEEEE
Q psy11143 52 PVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNSEGSAESVA 129 (940)
Q Consensus 52 p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~ 129 (940)
..++.+.+|+.+.|.|.+.+ |.|.|+|+|||.+|..+.++.+..++ ..|.|.+++.+|+|.|+|.|.| ....+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEE
Confidence 46788999999999999966 88899999999999888888777544 4689999999999999999843 45567
Q ss_pred EEEEec
Q psy11143 130 MIRING 135 (940)
Q Consensus 130 ~L~V~~ 135 (940)
.|.|..
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 777753
No 482
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.15 E-value=2e-09 Score=121.25 Aligned_cols=163 Identities=13% Similarity=0.225 Sum_probs=105.5
Q ss_pred eCCCcEEEecCCeEEEEEEeeccC--------------CCeEEEEEC--CE--e--ec-CC---------CC-eEE----
Q psy11143 50 QRPVSTTYSTGSTSRITCLVEGHP--------------LPQMTWFHD--GN--S--LD-SD---------DH-VTY---- 94 (940)
Q Consensus 50 ~~p~~~~V~eGesv~L~C~v~g~P--------------~p~V~W~kd--g~--~--I~-~~---------~~-~~~---- 94 (940)
.++..+.+.+|++++|.|..+..+ ...|.||+. |+ . +. .+ .. ..+
T Consensus 163 tq~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~ 242 (401)
T 3f8u_B 163 THTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWD 242 (401)
T ss_dssp ESCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEES
T ss_pred CCCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeec
Confidence 356678899999999999986433 347999863 31 1 11 10 01 112
Q ss_pred -------EeeceEEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEecccCCeeEecCCcee-ecCCC-cEEEEEEeCC-
Q psy11143 95 -------EHDGFVLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRINGHRAPRLVVKPFDMR-APAGS-SVEIPCKPDG- 164 (940)
Q Consensus 95 -------~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~~~~~P~~~~~p~~~~-v~~Ge-~vtL~C~v~g- 164 (940)
......|.|.+++.+|+|.|+|.+.+..+..+..+.|.|.. +|.+.+.+.... +..|+ .++|.|.+.+
T Consensus 243 ~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~--pP~V~v~p~~~~~~~~G~~~vtL~C~a~Gf 320 (401)
T 3f8u_B 243 DDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK--PPKVSLMPATLARAAPGEAPPELLCLVSHF 320 (401)
T ss_dssp CCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB--CCEEEEESSSCCCCCTTCCCCCEEEEEEEE
T ss_pred ccccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc--CCeEeeccCcceeecCCCccEEEEEEecCC
Confidence 12335689999999999999999999877666666677664 566766655544 45786 8999999998
Q ss_pred CCC--CeEEEe-eCCe---ecccc-----------CceEEeeeceEEEeecccCCC-ceEEEEEEcCC
Q psy11143 165 EPL--PRISWS-KDEA---EFVED-----------RNHKIHRTGSLRLYNIGPQDS-GLYRCTASNLL 214 (940)
Q Consensus 165 ~P~--p~ItW~-k~g~---~i~~~-----------~~~~~~~~~sL~I~~v~~~Ds-G~YtC~a~N~~ 214 (940)
+|. +.|+|. +++. .+... ....+.....|.+...+.++. +.|+|.+.+..
T Consensus 321 yP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 321 YPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp BSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred cCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 465 799995 7651 11111 011122223455555433344 59999999875
No 483
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=4.9e-11 Score=109.19 Aligned_cols=89 Identities=17% Similarity=0.261 Sum_probs=77.3
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEeC
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASNL 397 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N~ 397 (940)
.+|.|...+.++.+.+|++++|.|.+.+.|.+ +.|+|++..+....++.+..++ +|.|.++..+|+|.|+|.|.|.
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 57888888889999999999999999999988 9999999998877777777665 8999999999999999999998
Q ss_pred CeeEEEEEEEEEecC
Q psy11143 398 LGEDVAEGYLTVTGE 412 (940)
Q Consensus 398 ~G~~~~s~~L~V~~~ 412 (940)
....++.|.|...
T Consensus 86 --~~~~~~~l~V~~~ 98 (106)
T 2dlt_A 86 --ALSLSAKLNFLEI 98 (106)
T ss_dssp --CCCCCBCEEEECC
T ss_pred --CceEEEEEEEEEE
Confidence 4556667777743
No 484
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.15 E-value=1.3e-10 Score=105.78 Aligned_cols=92 Identities=17% Similarity=0.345 Sum_probs=74.8
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCe-eec-------cCCcEEEe----eeceEEEecCCCCCCe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEA-EFV-------EDRNHKIH----RTGSLRLYNIGPQDSG 388 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~-~i~-------~~~~~~i~----~~~sL~I~~v~~~D~G 388 (940)
.+|.+...+.++.+.+|++++|.|.+.+.|.+.+.|++++. .+. .+.++.+. ...+|.|.+++.+|+|
T Consensus 5 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 5 GSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp ---CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred cCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 45667777888999999999999999999999999999875 221 22355554 3558999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEecCC
Q psy11143 389 LYRCTASNLLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 389 ~YtC~A~N~~G~~~~s~~L~V~~~~ 413 (940)
.|+|.|.| .|..+..+.|.|.++|
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEECCC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999 8999999999998764
No 485
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=5.6e-11 Score=108.86 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=77.2
Q ss_pred cCCeEEEcCCceeecCCCeEEEEEeecCcCCC-eEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEe
Q psy11143 321 RAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p-~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.|...+.+..+.+|++++|.|.+.+.|.+ .+.|+|+|..+..+.++.+..++ +|.|.++..+|+|.|+|.|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 45667777888999999999999999998864 89999999999887788776655 799999999999999999855
Q ss_pred CCeeEEEEEEEEEecCCC
Q psy11143 397 LLGEDVAEGYLTVTGENS 414 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~~~~ 414 (940)
...++.|.|.++|.
T Consensus 87 ----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 87 ----LTSKASLIVRERSG 100 (104)
T ss_dssp ----EEEEECEEEECCCS
T ss_pred ----eeEEEEEEEeCCCc
Confidence 56788999998764
No 486
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.15 E-value=2.3e-10 Score=103.42 Aligned_cols=88 Identities=18% Similarity=0.220 Sum_probs=76.7
Q ss_pred cCCeEEEcCCc-eeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeec---eEEEecCCCCCCeEEEEEEEe
Q psy11143 321 RAPRLVVKPFD-MRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTG---SLRLYNIGPQDSGLYRCTASN 396 (940)
Q Consensus 321 ~~P~i~~~p~~-~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~---sL~I~~v~~~D~G~YtC~A~N 396 (940)
.+|.|...+.+ ..+.+|++++|.|.+. .|.|.+.|+|++..+..+.++.+...+ +|.|.++..+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 47888877776 6788999999999998 799999999999998877777776654 6999999999999999999
Q ss_pred CCeeEEEEEEEEEecCC
Q psy11143 397 LLGEDVAEGYLTVTGEN 413 (940)
Q Consensus 397 ~~G~~~~s~~L~V~~~~ 413 (940)
|....++.|.|.++|
T Consensus 83 --g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGP 97 (100)
T ss_dssp --TTEEEEEEEEECCSC
T ss_pred --CCceEEEEEEEecCC
Confidence 778888999998875
No 487
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.15 E-value=9.9e-11 Score=109.33 Aligned_cols=95 Identities=23% Similarity=0.363 Sum_probs=74.0
Q ss_pred EEEEeCCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEe------eceEEEEcccccCCCe
Q psy11143 39 HVTVNAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEH------DGFVLVLNGVRESDAG 112 (940)
Q Consensus 39 ~l~V~~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~------~gs~L~I~~v~~~DsG 112 (940)
.|.|..||.+...+... ..+...|.|.+.|+|.|.|+|+|+|..+.......+.. ....|.|.+++.+|+|
T Consensus 2 ~L~V~~pP~i~~~~~~~---~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 78 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEPE---LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNG 78 (118)
T ss_dssp --CCCCCCCCCCCCCCC---CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred EEEEecCCceeccCCCe---eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCE
Confidence 56788888765553322 23678899999999999999999999998766555441 3456899999999999
Q ss_pred EEEEEEEeCCCceEEEEEEEEecc
Q psy11143 113 VYNCVAQNSEGSAESVAMIRINGH 136 (940)
Q Consensus 113 ~YtC~a~n~~g~~~~~~~L~V~~~ 136 (940)
.|+|.|.|..|.....+.|.|...
T Consensus 79 ~Y~C~a~N~~G~~~~~~~l~v~~~ 102 (118)
T 1wwc_A 79 NYTLIAKNPLGTANQTINGHFLKE 102 (118)
T ss_dssp EEEEEEEETTEEEEEEEEECCSCC
T ss_pred EEEEEEECCCCeEeeEEEEEEccC
Confidence 999999999998888877766543
No 488
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=8.4e-11 Score=106.82 Aligned_cols=89 Identities=19% Similarity=0.412 Sum_probs=75.2
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeece--EEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGF--VLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs--~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.||.+...+....+.+|+.++|.|.+.+ |.+.|.|+|++..+....++.+..++. .|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 4778888889999999999999999987 778999999999998777777775553 689999999999999999988
Q ss_pred CCceEEEEEEEEeccc
Q psy11143 122 EGSAESVAMIRINGHR 137 (940)
Q Consensus 122 ~g~~~~~~~L~V~~~~ 137 (940)
....+.|.|...+
T Consensus 85 ---~~~~~~l~V~~~p 97 (103)
T 2edf_A 85 ---SKSTASLHVEEKA 97 (103)
T ss_dssp ---CEEEEEEEECCCS
T ss_pred ---CCcEEEEEEeCCC
Confidence 3556777776543
No 489
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.14 E-value=7.3e-11 Score=114.33 Aligned_cols=84 Identities=20% Similarity=0.435 Sum_probs=69.9
Q ss_pred CCCcEEEecCCeEEEEEEeeccCCCeEEEEECC----------------------------Eee-cCCCCeEEEeec--e
Q psy11143 51 RPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDG----------------------------NSL-DSDDHVTYEHDG--F 99 (940)
Q Consensus 51 ~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg----------------------------~~I-~~~~~~~~~~~g--s 99 (940)
.|..+++.+|+.++|.|.+.|.|.|.|+|+|++ ..+ ....++.+...+ +
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 367889999999999999999999999999998 444 233455555333 4
Q ss_pred EEEEcccccCCCeEEEEEEEeCCCceEEEEEEEEe
Q psy11143 100 VLVLNGVRESDAGVYNCVAQNSEGSAESVAMIRIN 134 (940)
Q Consensus 100 ~L~I~~v~~~DsG~YtC~a~n~~g~~~~~~~L~V~ 134 (940)
.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 68999999999999999999999988878777764
No 490
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.14 E-value=2e-10 Score=101.97 Aligned_cols=83 Identities=25% Similarity=0.434 Sum_probs=70.0
Q ss_pred CCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeeceEEEEcccccCCCeEEEEEEEeCCCc
Q psy11143 45 PPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDGFVLVLNGVRESDAGVYNCVAQNSEGS 124 (940)
Q Consensus 45 pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~gs~L~I~~v~~~DsG~YtC~a~n~~g~ 124 (940)
++.+...|....+.+|+.+.|.|.+.|.|.+.|.|+|++..+.... ...|.|.+++.+|+|.|+|.|.|..|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 75 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET-------KKLYMVPYVDLEHQGTYWCHVYNDRDS 75 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC-------SSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC-------CCeEEECCCCHHhCEEEEEEEEcCCCC
Confidence 5677788888999999999999999999999999999999886543 246799999999999999999999986
Q ss_pred eEE-EEEEEEe
Q psy11143 125 AES-VAMIRIN 134 (940)
Q Consensus 125 ~~~-~~~L~V~ 134 (940)
..+ .+.|.|.
T Consensus 76 ~~s~~~~l~V~ 86 (91)
T 3bfo_A 76 QDSKKVEIIID 86 (91)
T ss_dssp EECCCEEEEEC
T ss_pred EEeeeEEEEEe
Confidence 553 4555553
No 491
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=104.45 Aligned_cols=83 Identities=24% Similarity=0.457 Sum_probs=65.2
Q ss_pred CCeEEeCCCcEEE--ecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEe
Q psy11143 45 PPIFIQRPVSTTY--STGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQN 120 (940)
Q Consensus 45 pP~~~~~p~~~~V--~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n 120 (940)
|+.+...+.+..+ .+|+.+.|.|.+.+ |.+.|+|+|||..|..+.++++..++ ..|.|.+++.+|+|.|+|.|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 5555555555544 58999999999966 88899999999999888888877555 3589999999999999999855
Q ss_pred CCCceEEEEEEE
Q psy11143 121 SEGSAESVAMIR 132 (940)
Q Consensus 121 ~~g~~~~~~~L~ 132 (940)
. ...+.|+
T Consensus 83 ~----~~~~~lt 90 (91)
T 2lvc_A 83 E----CAYFTVT 90 (91)
T ss_dssp C----EEEEEEE
T ss_pred e----EEEEEEE
Confidence 3 4455544
No 492
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.13 E-value=2.3e-10 Score=102.35 Aligned_cols=83 Identities=27% Similarity=0.431 Sum_probs=72.0
Q ss_pred cCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEeeeceEEEecCCCCCCeEEEEEEEeCCeeEEEEEEE
Q psy11143 328 KPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGEDVAEGYL 407 (940)
Q Consensus 328 ~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~~~~sL~I~~v~~~D~G~YtC~A~N~~G~~~~s~~L 407 (940)
.|.+..+.+|++++|.|.+.+ .|.+.|+|+|..+....++.+ ..++|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 83 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVL-IGEYLQIKGATPRDSGLYACTAARTVDSETWIFMV 83 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEE-ETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEE-eCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEE
Confidence 355678899999999999987 579999999999877777665 46799999999999999999999999999999999
Q ss_pred EEecCC
Q psy11143 408 TVTGEN 413 (940)
Q Consensus 408 ~V~~~~ 413 (940)
.|..++
T Consensus 84 ~V~~~~ 89 (95)
T 4hwu_A 84 NVTDAA 89 (95)
T ss_dssp EECCC-
T ss_pred EEeCCc
Confidence 998764
No 493
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.13 E-value=2.8e-10 Score=105.23 Aligned_cols=100 Identities=23% Similarity=0.447 Sum_probs=84.6
Q ss_pred CcceeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEeeeCCCeEEEEECCeecCCCCceEEeecC--eEEEEeeec
Q psy11143 214 LGEDVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVR 291 (940)
Q Consensus 214 ~g~~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G~P~p~ItW~k~g~~l~~~~~~~~~~~g--~sL~I~~v~ 291 (940)
.|..+.++.|.|...+|.+...+....+.+|+++.|.|.+.+. |.+.|+|++..+..+.++.+..++ ..|.|.++.
T Consensus 4 ~g~~~~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~ 81 (113)
T 2edh_A 4 GSSGRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLV 81 (113)
T ss_dssp CCCCCCCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCC
T ss_pred CCCCcEEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCC
Confidence 4556677888888777788888888999999999999999775 689999999999888888877666 359999999
Q ss_pred cCCCeEEEEEEEeCCCCceeEEEEEEee
Q psy11143 292 ESDAGVYNCVAQNSEGSAESVAMIRING 319 (940)
Q Consensus 292 ~~DsG~YtC~A~N~~Gs~~~s~~l~V~~ 319 (940)
.+|+|.|+|.| +....++.|.|..
T Consensus 82 ~~D~G~Y~C~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 82 AEDAGEYLCMC----GKERTSAMLTVRA 105 (113)
T ss_dssp STTCEEEEEEE----TTEEEEEEEEECC
T ss_pred hhhCEEEEEEe----CCCCEEEEEEEeC
Confidence 99999999999 6667777777764
No 494
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=107.85 Aligned_cols=93 Identities=32% Similarity=0.620 Sum_probs=73.0
Q ss_pred ccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCC-----cEEEeeeceEEEe-----cCCCCCCeE
Q psy11143 320 HRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDR-----NHKIHRTGSLRLY-----NIGPQDSGL 389 (940)
Q Consensus 320 ~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~-----~~~i~~~~sL~I~-----~v~~~D~G~ 389 (940)
..||.+...|.+..+.+|++++|.|.+.|.|.|.|+|+|++..+.... ......++.+.+. +++.+|+|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 357888888888999999999999999999999999999998876442 2334445555554 457899999
Q ss_pred EEEEEEeCCeeEEE-EEEEEEecC
Q psy11143 390 YRCTASNLLGEDVA-EGYLTVTGE 412 (940)
Q Consensus 390 YtC~A~N~~G~~~~-s~~L~V~~~ 412 (940)
|+|.|.|..|...+ .+.|.|..+
T Consensus 87 Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 87 YVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEEEETTEEEECCCEEEEEC--
T ss_pred EEEEEEeCccceEeeeEEEEhhhh
Confidence 99999999998766 556666543
No 495
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=3.7e-11 Score=111.89 Aligned_cols=100 Identities=22% Similarity=0.298 Sum_probs=81.4
Q ss_pred EEEEEeeccCCeEEEcCCceeecCCCeEEEEEeecCcCCCeEEEEeCCeeeccCCcEEEe-e---eceEEEecCCCCCCe
Q psy11143 313 AMIRINGHRAPRLVVKPFDMRAPAGSSVEIPCKPDGEPLPRISWSKDEAEFVEDRNHKIH-R---TGSLRLYNIGPQDSG 388 (940)
Q Consensus 313 ~~l~V~~~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~P~p~i~W~k~g~~i~~~~~~~i~-~---~~sL~I~~v~~~D~G 388 (940)
+.|.|.. .++.+...+.+..+.+|++++|.|.+.|.|.|.+.|+|++..+..+.++.+. . ..+|.|.++..+|+|
T Consensus 5 a~l~V~~-~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (115)
T 2cr6_A 5 SSGLVQG-RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSG 83 (115)
T ss_dssp CCCCCCS-SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCE
T ss_pred EEEEEcC-CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCE
Confidence 3445543 3457888888899999999999999999999999999999998877666554 2 237999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEecCCCCCC
Q psy11143 389 LYRCTASNLLGEDVAEGYLTVTGENSVEP 417 (940)
Q Consensus 389 ~YtC~A~N~~G~~~~s~~L~V~~~~~~~~ 417 (940)
.|+|. .|....++.|.|..+|.+..
T Consensus 84 ~Y~C~----~g~~~~~~~L~V~~~p~~~~ 108 (115)
T 2cr6_A 84 TIYFE----AGDQRASAALRVTEKPSVFS 108 (115)
T ss_dssp EEEEE----ETTEECCEEEEEECCSSCCS
T ss_pred EEEEE----ECCeeEEEEEEEECCCceec
Confidence 99999 46777889999998775433
No 496
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.12 E-value=5.2e-10 Score=114.37 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=110.4
Q ss_pred eeEecCCceeecCCCcEEEEEEeCCCCCC-eEEEeeC--CeeccccCceEEeeeceEEEeecccCCCceEEEEEEcCCcc
Q psy11143 140 RLVVKPFDMRAPAGSSVEIPCKPDGEPLP-RISWSKD--EAEFVEDRNHKIHRTGSLRLYNIGPQDSGLYRCTASNLLGE 216 (940)
Q Consensus 140 ~~~~~p~~~~v~~Ge~vtL~C~v~g~P~p-~ItW~k~--g~~i~~~~~~~~~~~~sL~I~~v~~~DsG~YtC~a~N~~g~ 216 (940)
.+.+.|....|.+|+++.|.|.+.. +.+ .+.|.-. +...... .....+.|.+++ +|.+.|.|.+......
T Consensus 4 ~v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~g-----~~~~~~~ls~vs-~d~~~~~C~~~c~~~~ 76 (196)
T 3bn3_B 4 WADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLRRNGTQRG-----LRWLARQLVDIR-EPETQPVCFFRCARRT 76 (196)
T ss_dssp CEEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSEEEEEEEE-----TTEEEEEEEEEC-SSEECCEEEEEETTEE
T ss_pred EEEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccCCeeEccc-----cCceEEEEEEEc-cCCCceEEEEECCCCc
Confidence 3456677788999999999999974 444 6788542 1111000 011238899998 8888899998776666
Q ss_pred eeeeeeeeecCCCCeeeeCCCeeEEecCCeEEEEEEEee-eCCC--eEEEEECCeecCCCCceEEee-----cCeEEEEe
Q psy11143 217 DVAEGYLTVTGAPPIFIQRPVSTTYSTGSTSRITCLVEG-HPLP--QMTWFHDGNSLDSDDHVTYEH-----DGFVLVLN 288 (940)
Q Consensus 217 ~s~s~~L~V~~~~p~~~~~p~~~~v~~G~~v~L~C~v~G-~P~p--~ItW~k~g~~l~~~~~~~~~~-----~g~sL~I~ 288 (940)
.+..+.|.|...|....+.+....+.+|+.++|+|.+.+ +|.. +|+|+|++..+..... .... ....+++.
T Consensus 77 ~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~-~~~~~~~~~~t~~~~~~ 155 (196)
T 3bn3_B 77 LQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSF-AGEPPRARGAVLTATVL 155 (196)
T ss_dssp EEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEEC-TTSCTTCCCEEEEEEEE
T ss_pred eEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeecccc-ccccccccceeEEEEEe
Confidence 778889999876666666666556889999999999988 4554 4899999988742210 0000 01235666
Q ss_pred eeccCCCeEEEEEEEeCCC
Q psy11143 289 GVRESDAGVYNCVAQNSEG 307 (940)
Q Consensus 289 ~v~~~DsG~YtC~A~N~~G 307 (940)
....++...|+|.|.|..+
T Consensus 156 ~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 156 ARREDHGANFSCRAELDLR 174 (196)
T ss_dssp CCGGGTTCEEEEEEEEECG
T ss_pred eeeccCCCeEEEEEEccCC
Confidence 5556565699999999876
No 497
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=105.97 Aligned_cols=88 Identities=22% Similarity=0.520 Sum_probs=72.7
Q ss_pred CCCeEEeCCCc---EEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEE
Q psy11143 44 APPIFIQRPVS---TTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVA 118 (940)
Q Consensus 44 ~pP~~~~~p~~---~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a 118 (940)
.+|.+...|.. +.+.+|+.++|.|.+.+.|.+ |.|+|++..+....++.+..++ ..|.|.+++.+|+|.|+|.+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 46777777777 789999999999999999988 9999999999877777776444 46899999999999999999
Q ss_pred EeCCCceEEEEEEEEecc
Q psy11143 119 QNSEGSAESVAMIRINGH 136 (940)
Q Consensus 119 ~n~~g~~~~~~~L~V~~~ 136 (940)
.|..+ .+.|.|...
T Consensus 85 ~n~~~----~~~l~V~~~ 98 (104)
T 2e6p_A 85 EGVSA----FFGVTVQDP 98 (104)
T ss_dssp SSCCC----CEEEEEECC
T ss_pred CCceE----EEEEEEcCC
Confidence 88743 455666553
No 498
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.12 E-value=1e-10 Score=107.02 Aligned_cols=88 Identities=20% Similarity=0.352 Sum_probs=74.0
Q ss_pred CCCeEEeCCCcEEEecCCeEEEEEEeeccCCCeEEEEECCEeecCCCCeEEEeec--eEEEEcccccCCCeEEEEEEEeC
Q psy11143 44 APPIFIQRPVSTTYSTGSTSRITCLVEGHPLPQMTWFHDGNSLDSDDHVTYEHDG--FVLVLNGVRESDAGVYNCVAQNS 121 (940)
Q Consensus 44 ~pP~~~~~p~~~~V~eGesv~L~C~v~g~P~p~V~W~kdg~~I~~~~~~~~~~~g--s~L~I~~v~~~DsG~YtC~a~n~ 121 (940)
.+|.|...+.++.+.+|+.+.|.|.+.+.|.+ |.|+|++..+....++.+..++ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 47888899999999999999999999998877 9999999999877777777555 56899999999999999999987
Q ss_pred CCceEEEEEEEEe
Q psy11143 122 EGSAESVAMIRIN 134 (940)
Q Consensus 122 ~g~~~~~~~L~V~ 134 (940)
.....+.|.|.
T Consensus 86 --~~~~~~~l~V~ 96 (106)
T 2dlt_A 86 --ALSLSAKLNFL 96 (106)
T ss_dssp --CCCCCBCEEEE
T ss_pred --CceEEEEEEEE
Confidence 33344555554
No 499
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.11 E-value=4.5e-10 Score=102.42 Aligned_cols=90 Identities=26% Similarity=0.446 Sum_probs=73.1
Q ss_pred ccCCeEEEcCCceeecCCCeEEEEEeecCc--CCCeEEEEeCCeeeccCCcEEE-----------eeeceEEEecCCCCC
Q psy11143 320 HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE--PLPRISWSKDEAEFVEDRNHKI-----------HRTGSLRLYNIGPQD 386 (940)
Q Consensus 320 ~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~--P~p~i~W~k~g~~i~~~~~~~i-----------~~~~sL~I~~v~~~D 386 (940)
..+|.+...|....+.+|++++|.|.+.+. |.+.+.|+|++..+........ ...++|.|.+++.+|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 468889988888999999999999999965 4579999999988764421111 124689999999999
Q ss_pred CeEEEEEEEeCCee-EEEEEEEEE
Q psy11143 387 SGLYRCTASNLLGE-DVAEGYLTV 409 (940)
Q Consensus 387 ~G~YtC~A~N~~G~-~~~s~~L~V 409 (940)
+|.|+|.|.|..|. .+..+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999998 457777776
No 500
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.11 E-value=6.7e-10 Score=116.86 Aligned_cols=159 Identities=19% Similarity=0.318 Sum_probs=105.1
Q ss_pred eeCCCeeEEecCCeEEEEEEEeeeC--CCeEEEEEC--Cee---cC---------CCCceEEeec----CeEEEEeeecc
Q psy11143 233 IQRPVSTTYSTGSTSRITCLVEGHP--LPQMTWFHD--GNS---LD---------SDDHVTYEHD----GFVLVLNGVRE 292 (940)
Q Consensus 233 ~~~p~~~~v~~G~~v~L~C~v~G~P--~p~ItW~k~--g~~---l~---------~~~~~~~~~~----g~sL~I~~v~~ 292 (940)
...|....+.+|++++|.|.+.+.+ ...+.|++. |.. +. ...++.+..+ ..+|.|.+++.
T Consensus 5 ~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 84 (229)
T 1hxm_A 5 VPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSE 84 (229)
T ss_dssp EESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCG
T ss_pred EeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCH
Confidence 4456778899999999999998654 468999985 221 10 1345555432 23699999999
Q ss_pred CCCeEEEEEEEeCCC------C--ceeEEEEEEee----ccCCeEEEcCCceeecCCCeEEEEEeecCc-CCC-eEEEEe
Q psy11143 293 SDAGVYNCVAQNSEG------S--AESVAMIRING----HRAPRLVVKPFDMRAPAGSSVEIPCKPDGE-PLP-RISWSK 358 (940)
Q Consensus 293 ~DsG~YtC~A~N~~G------s--~~~s~~l~V~~----~~~P~i~~~p~~~~v~~G~~vtL~C~v~g~-P~p-~i~W~k 358 (940)
+|+|.|.|.+.+..+ . ......|.|.. ..+|.+.... ..++|.|.+.|. |.+ .|.|++
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~~--------~~~~L~C~~~g~~P~~i~v~W~~ 156 (229)
T 1hxm_A 85 RDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMK--------NGTNVACLVKEFYPKDIRINLVS 156 (229)
T ss_dssp GGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEEE--------ETTEEEEEEESCBSSCCEEEEEC
T ss_pred hHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEcC--------CCCeEEEEEEEEeCCCEEEEEec
Confidence 999999999988631 1 11223566653 1245444321 125899999875 555 899999
Q ss_pred CCeeeccCCc-EEEeeeceEEEecCCC-CCCeEEEEEEEeCCee
Q psy11143 359 DEAEFVEDRN-HKIHRTGSLRLYNIGP-QDSGLYRCTASNLLGE 400 (940)
Q Consensus 359 ~g~~i~~~~~-~~i~~~~sL~I~~v~~-~D~G~YtC~A~N~~G~ 400 (940)
+ ..+..... .....++++.+..... .+.|.|+|.|.|..+.
T Consensus 157 ~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~~ 199 (229)
T 1hxm_A 157 S-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNKT 199 (229)
T ss_dssp S-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTEE
T ss_pred C-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCCCC
Confidence 9 66654322 2223345666654443 6789999999998754
Done!