BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11147
(279 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 247 bits (630), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 167/240 (69%), Gaps = 13/240 (5%)
Query: 18 RTMEVQRTAGVSTTDLVGRMLSMTSQHNAS-DVARPYERKA---------RSPYTTCSSQ 67
R E +RT GVSTTDLVGRML +T H++S +++ Y A R+P+T S Q
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGVS-Q 192
Query: 68 FLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGD--YLIVGIHPD 125
FL T++KI QF+ G++P+P + ++YV GA+DLFH GH+DFLEK + + Y+I G+H D
Sbjct: 193 FLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFD 252
Query: 126 HVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAV 185
V YKG YPIMNLHER LSVLAC+YV EVVIGAPY +TA++LS +VD+VC G +
Sbjct: 253 QEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEI 312
Query: 186 LPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEKENKEMKLIE 245
+PD G DPY E K+ G F+ IDSG+ TT+ IV RI+ +RLE+E RN +KE KE+ +E
Sbjct: 313 IPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARNQKKEAKELAFLE 372
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 83 QPKPTDRI---VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIM 139
QP P R V+ DG YD+ H GH + L +A+ GDYLIVG+H D +A +K G P+
Sbjct: 14 QPGPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHK--GPPVF 71
Query: 140 NLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAK 199
ER V A K+VDEVV APY T + L + D G L + GRD Y E K
Sbjct: 72 TQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLTVD-GRDTYEEVK 130
Query: 200 KLGKFKLIDSGNTTTTEKIVDRIVF 224
+ G+++ +T +V R++
Sbjct: 131 QAGRYRECKRTQGVSTTDLVGRMLL 155
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/242 (51%), Positives = 166/242 (68%), Gaps = 13/242 (5%)
Query: 18 RTMEVQRTAGVSTTDLVGRMLSMTSQHNAS-DVARPYERKA---------RSPYTTCSSQ 67
R E +RT GVSTTDLVGRML +T H++S +++ Y A R+P+T S Q
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGVS-Q 192
Query: 68 FLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGD--YLIVGIHPD 125
FL T++KI QF+ G++P+P + ++YV GA+DLFH GH+DFLEK + Y+I G+H D
Sbjct: 193 FLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFD 252
Query: 126 HVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAV 185
V YKG YPIMNLHER LSVLAC+YV EVVIGAPY++TA++L +VD+VC G V
Sbjct: 253 QEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLDHFKVDLVCHGKTEV 312
Query: 186 LPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEKENKEMKLIE 245
+PD+ G DPY E K+ G F +DSGN TT+ IV RI+ +RLE+E RN +KE KE+ E
Sbjct: 313 VPDKDGSDPYEEPKRRGIFCQVDSGNDLTTDLIVQRIIKNRLEYEARNQKKEAKELAFQE 372
Query: 246 LI 247
+
Sbjct: 373 AM 374
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 82 RQPKPTDRI---VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPI 138
++P P R V+ DG YD+ H GH + L +A+ GD+LIVG+H D +A +K G P+
Sbjct: 13 KRPGPRARRAVRVWCDGCYDMVHYGHSNQLRQARAMGDHLIVGVHTDEEIAKHK--GPPV 70
Query: 139 MNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEA 198
ER V A K+VDEVV APY T + L + D G L + GRD Y E
Sbjct: 71 FTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLTVD-GRDTYEEV 129
Query: 199 KKLGKFKLIDSGNTTTTEKIVDRIVF 224
K+ G+++ +T +V R++
Sbjct: 130 KQAGRYRECKRTQGVSTTDLVGRMLL 155
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 169/269 (62%), Gaps = 31/269 (11%)
Query: 18 RTMEVQRTAGVSTTDLVGRMLSMTSQHNAS-DVARPYERKA------------------- 57
R E +RT GVSTTDLVGRML +T H++S +++ Y A
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSE 193
Query: 58 --------RSPYTTCSSQFLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLE 109
+SP+T S QFL T++KI QF+ G++P+P + ++YV GA+DLFH GH+DFL+
Sbjct: 194 VSSQCPGGQSPWTGVS-QFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQ 252
Query: 110 KAKQAGD--YLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITA 167
+ + Y+I G+H D V YKG YPIMNLHER LSVLAC+YV EVVIGAPY++TA
Sbjct: 253 EVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTA 312
Query: 168 DMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRL 227
++L+ +VD+VC G ++PD G DPY E K+ G F IDSG+ TT+ IV RI+ +RL
Sbjct: 313 ELLNHFKVDLVCHGKTEIVPDRDGSDPYEEPKRRGIFCQIDSGSDLTTDLIVQRIIKNRL 372
Query: 228 EFERRNFEKENKEMKLIELIESSKTGATG 256
E+E RN +KE KE+ +E + + G
Sbjct: 373 EYEARNQKKEAKELAFLEALRQQEAQPRG 401
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
V+ DG YD+ H GH + L +A+ GDYLIVG+H D +A +K G P+ ER V A
Sbjct: 25 VWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHK--GPPVFTQEERYKMVQA 82
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSG 210
K+VDEVV APY T + L + D G L + GRD Y E K+ G+++
Sbjct: 83 IKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLTVD-GRDTYEEVKQAGRYRECKRT 141
Query: 211 NTTTTEKIVDRIVF 224
+T +V R++
Sbjct: 142 QGVSTTDLVGRMLL 155
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 170/271 (62%), Gaps = 31/271 (11%)
Query: 18 RTMEVQRTAGVSTTDLVGRMLSMTSQHNAS-DVARPYERKA------------------- 57
R E +RT GVSTTDLVGRML +T H++S +++ Y A
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSE 193
Query: 58 --------RSPYTTCSSQFLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLE 109
+SP+T S QFL T++KI QF+ G++P+P + ++YV GA+DLFH GH+DFL+
Sbjct: 194 VSSQCPGGQSPWTGVS-QFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQ 252
Query: 110 KAKQAGD--YLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITA 167
+ + Y+I G+H D V YKG YPIMNLHER LSVLAC+YV EVVIGAPY++TA
Sbjct: 253 EVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTA 312
Query: 168 DMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRL 227
++L+ +VD+VC G ++PD G DPY E K+ G F IDSG+ TT+ IV RI+ +RL
Sbjct: 313 ELLNHFKVDLVCHGKTEIVPDRDGSDPYQEPKRRGIFYQIDSGSDLTTDLIVQRIIKNRL 372
Query: 228 EFERRNFEKENKEMKLIELIESSKTGATGMV 258
E+E RN +KE KE+ +E + + G +
Sbjct: 373 EYEARNQKKEAKELAFLEATKQQEAPPGGEI 403
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
V+ DG YD+ H GH + L +A+ GDYLIVG+H D +A +K G P+ ER V A
Sbjct: 25 VWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHK--GPPVFTQEERYKMVQA 82
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSG 210
K+VDEVV APY T + L + D G L + GRD Y E K+ G+++
Sbjct: 83 IKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLTVD-GRDTYEEVKQAGRYRECKRT 141
Query: 211 NTTTTEKIVDRIVF 224
+T +V R++
Sbjct: 142 QGVSTTDLVGRMLL 155
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 224 bits (572), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 155/234 (66%), Gaps = 11/234 (4%)
Query: 22 VQRTAGVSTTDLVGRMLSMTSQH--NASDV-------ARPYERKARSPYTTCSSQFLLTT 72
++RT GVSTT+LVGRML T H N S P +SPYT+ S FL TT
Sbjct: 125 IKRTEGVSTTELVGRMLLCTKDHLQNVSGEQTSPLGGVNPNVLHKQSPYTSLS-HFLPTT 183
Query: 73 EKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYK 132
KI QFSEGR PKP D+I+Y+DG +DLFH GH + L++A+ GDYLIVG+H D VV K
Sbjct: 184 RKIVQFSEGRSPKPNDKIIYMDGGFDLFHVGHTEALKQARALGDYLIVGVHDDRVVHEQK 243
Query: 133 GYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG-LAAVLPDETG 191
G +PIMNLHERVLSVL+C+YVDEVVIGAP+++T DM+ L +++V G VL E G
Sbjct: 244 GSNFPIMNLHERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHGDDQVVLGPEGG 303
Query: 192 RDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEKENKEMKLIE 245
DPY ++LG +K + T +IV RI+ +RL++E RN +KE KE+ IE
Sbjct: 304 VDPYKLPRELGIYKEVKHTEGLTATEIVKRIIDNRLQYEARNRKKEAKEINFIE 357
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 3/134 (2%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
VYVDG +DL H GH + L +A++ GD L+VG+H D +A K G P+MN ER +V A
Sbjct: 12 VYVDGCFDLMHFGHANALRQARELGDILVVGVHTDEEIA--KNKGPPVMNEQERYKAVRA 69
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSG 210
CK+ DEV GAPYT+T + L L D G + G+D Y KK GKF+ I
Sbjct: 70 CKWADEVAEGAPYTLTEEYLDSLNCDFCVHG-EDISVGADGKDVYEGIKKSGKFRFIKRT 128
Query: 211 NTTTTEKIVDRIVF 224
+T ++V R++
Sbjct: 129 EGVSTTELVGRMLL 142
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 37/229 (16%)
Query: 21 EVQRTAGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCSSQFLLTTEKIRQFSE 80
EV+RT G+STT++VGRM+ + ++ + D K + S F+ S
Sbjct: 121 EVERTFGISTTEIVGRMM-LKNRGSWLDGENGESSKDSGYHDRLLSLFMS--------SM 171
Query: 81 GRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMN 140
GR+ + ++V++DG +DLFH GH+ L A+ GDYLIVGIH D Y YP+++
Sbjct: 172 GREKRG--KVVFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDDETTKEYT-RSYPVLS 228
Query: 141 LHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKK 200
ER+L+++AC+YVDE+V+ +PY + ++ + + +D+V P ++K
Sbjct: 229 TKERMLTLMACRYVDEIVV-SPYLVGSEFIKRHGIDVVA--------------PSFDSKD 273
Query: 201 LGKFKLI----------DSGNTTTTEKIVDRIVFHRLEFERRNFEKENK 239
L ++ I + N + E IV+RI+ + ++ R ++ K
Sbjct: 274 LSRYDGIKDVVEHSYAENRFNYLSAEHIVNRIISNYQDYANRQKKRTGK 322
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
V+ DG +D+FH GH + L ++K GDYLI G+H + K G P+M ER V
Sbjct: 9 VWADGCFDMFHYGHANALRQSKALGDYLIAGVHSSLSINQEK--GLPVMEDEERYEVVEG 66
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSG 210
C+YVDEVV AP+ M+ + V IV G VL D +G+D Y + +++G F+ ++
Sbjct: 67 CRYVDEVVRDAPFVTQTSMIKEYGVSIVAHGNDIVL-DSSGQDSYCQVRRMGIFREVERT 125
Query: 211 NTTTTEKIVDRIVF 224
+T +IV R++
Sbjct: 126 FGISTTEIVGRMML 139
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQ--AGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
VY DG +DLFH GH L +AK YLIVG+ D + +KG+ +MN +ER +V
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFT--VMNENERYDAV 136
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETG--RDPYSEAKKLGKFKL 206
C+YVDEVV AP+T+T + L++ R+D V +P + D Y K+ G F
Sbjct: 137 QHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHD---DIPYSSAGSDDVYKHIKEAGMFAP 193
Query: 207 IDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
+T I+ RIV + RRN ++
Sbjct: 194 TQRTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
VY DG +DLFH GH L +AK YLIVG+ D + +KG+ +MN +ER +V
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGF--TVMNENERYDAV 136
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLID 208
C+YVDEVV AP+T+T + L++ R+D V D Y K+ G F
Sbjct: 137 QHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHD-DIPYSSAGSDDVYKHIKEAGMFAPTQ 195
Query: 209 SGNTTTTEKIVDRIVFHRLEFERRNFEK 236
+T I+ RIV + RRN ++
Sbjct: 196 RTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
VY DG +DLFH GH L +AK YLIVG+ D + +KG+ +MN +ER +V
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGF--TVMNENERYDAV 136
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRG---LAAVLPDETGRDPYSEAKKLGKFK 205
C+YVDEVV AP+T+T + L++ R+D V ++ D D Y K G F
Sbjct: 137 QHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSD----DVYKHIKDAGMFA 192
Query: 206 LIDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
+T I+ RIV + RRN ++
Sbjct: 193 PTQRTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
VY DG +DLFH GH+ LE+AK+ +LIVG+ D + KG +MN ER ++
Sbjct: 104 VYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLT--VMNDKERAEAL 161
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLID 208
CK+VDEV+ AP+ IT + L + ++D V D++G D Y KK+GKF
Sbjct: 162 RHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYASDDSG-DIYLPVKKVGKFIPTK 220
Query: 209 SGNTTTTEKIVDRIVFHRLEFERRNFEK 236
+T ++ RI+ ++ RN +
Sbjct: 221 RTEGVSTSDLITRIIRDYDQYVMRNLAR 248
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
VY DG +DLFH GH L +AK Y IVG+ D + +KG+ +MN +ER +V
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGF--TVMNENERYDAV 136
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRG---LAAVLPDETGRDPYSEAKKLGKFK 205
C+YVDEVV AP+T+T + L++ R+D V ++ D D Y K+ G F
Sbjct: 137 QHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSD----DVYKHIKEAGMFA 192
Query: 206 LIDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
+T I+ RIV + RRN ++
Sbjct: 193 PTQRTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
+++DG D FH GH + + +AKQ G+ L++GIH D + K G P+M L ER LS
Sbjct: 11 LWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNK--GPPVMTLEERCLSANT 68
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSG 210
CK+VDEVV APY + + + V G + D G D Y AK ++ +
Sbjct: 69 CKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG-DDISTDANGDDCYRFAKAADQYLEVKRT 127
Query: 211 NTTTTEKIVDRIV 223
+T +++DR++
Sbjct: 128 EGVSTTELLDRLL 140
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 25/160 (15%)
Query: 20 MEVQRTAGVSTTDLVGRMLS----------MTSQHNASDVARPY--ERKARSPYTTCSSQ 67
+EV+RT GVSTT+L+ R+LS ++ + D+ R + + +P+T
Sbjct: 122 LEVKRTEGVSTTELLDRLLSSVPLEIYSTPVSVLSSQIDLLRRFATDSDGLTPFTDV--- 178
Query: 68 FLLTTEKIRQFSEGR---QPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGI 122
F+ TEK G + P I+Y+DG +DLF H+ LE + G ++ GI
Sbjct: 179 FIYNTEKPETLISGTTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIMAGI 238
Query: 123 HPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAP 162
D K + P++NL ER+L++L CKY+ +++G P
Sbjct: 239 FADE-----KCFEKPMLNLLERILNLLQCKYISSILVGPP 273
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 79 SEGRQPKPTDR--IVYVDGAYDLFHPGHLDFLEKAKQ--AGDYLIVGIHPDHVVAWYKGY 134
++ R P DR VY DG +DLFH GH L +AK YL+VG+ D + +KG+
Sbjct: 65 AQARLGTPADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGF 124
Query: 135 GYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETG--R 192
+MN ER ++ C+YVDEV+ AP+T+T + L + ++D V +P +
Sbjct: 125 T--VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHD---DIPYSSAGSD 179
Query: 193 DPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
D Y K+ G F +T I+ RIV + RRN ++
Sbjct: 180 DVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 79 SEGRQPKPTDR--IVYVDGAYDLFHPGHLDFLEKAKQ--AGDYLIVGIHPDHVVAWYKGY 134
++ R P DR VY DG +DLFH GH L +AK YL+VG+ D + +KG+
Sbjct: 65 AQARLGTPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGF 124
Query: 135 GYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETG--R 192
+MN ER ++ C+YVDEV+ AP+T+T + L + ++D V +P +
Sbjct: 125 T--VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHD---DIPYSSAGSD 179
Query: 193 DPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
D Y K+ G F +T I+ RIV + RRN ++
Sbjct: 180 DVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 79 SEGRQPKPTDR--IVYVDGAYDLFHPGHLDFLEKAKQ--AGDYLIVGIHPDHVVAWYKGY 134
++ R P DR VY DG +DLFH GH L +AK YL+VG+ D + +KG+
Sbjct: 65 AQARLGTPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGF 124
Query: 135 GYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETG--R 192
+MN ER ++ C+YVDEV+ AP+T+T + L + ++D V +P +
Sbjct: 125 T--VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHD---DIPYSSAGSD 179
Query: 193 DPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
D Y K+ G F +T I+ RIV + RRN ++
Sbjct: 180 DVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQR 223
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 86 PTDR--IVYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNL 141
PTDR +Y DG +DLFH GH+ LE+ K+A LIVG+ D + +K G ++
Sbjct: 99 PTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKIT--HKLKGLTVLTD 156
Query: 142 HERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKL 201
+R ++ C++VDEVV AP+ +T + L + ++D V + ++ D Y K++
Sbjct: 157 KQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVSADSD-DIYKPIKEM 215
Query: 202 GKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNF 234
GKF N +T I+ +I+ ++ RNF
Sbjct: 216 GKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNF 248
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
+Y DG YDLFH GH + L + K+ YLIVG+ D YKG + + ER V
Sbjct: 83 IYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGR--TVTSEEERYDGV 140
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCR-GLAAVLPDETGRDPYSEAKKLGKFKLI 207
C+YVDEV AP+ T + L L+VD + + V P E D Y + ++ G F
Sbjct: 141 RHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYVAPGE--EDLYEKFRREGMFLET 198
Query: 208 DSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
+ +T +V RI+ ++ RRN ++
Sbjct: 199 ERTEGVSTSDVVCRIIRDYDKYVRRNLQR 227
>sp|Q4KJA9|HLDE_PSEF5 Bifunctional protein HldE OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=hldE PE=3 SV=1
Length = 477
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S S Q LL + R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLSLDQLLLAIDDARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV I+ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAINDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++LSQ+R D++ +G + G D G
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLSQVRPDVLVKGGDYSIDQVVGADIVGAYG--GTV 452
Query: 205 KLIDSGNTTTTEKIVDRI 222
K++ ++T IV++I
Sbjct: 453 KVLGLVENSSTTAIVEKI 470
>sp|C3KDB8|HLDE_PSEFS Bifunctional protein HldE OS=Pseudomonas fluorescens (strain SBW25)
GN=hldE PE=3 SV=1
Length = 474
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R S + Q LL + R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQRSEGSERGVLTIEQLLLAIDDARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----SIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++L+Q++ D++ +G + G D S GK
Sbjct: 395 RMAVLAGLGAVDWVISFPEATPENLLAQVKPDVLVKGGDYSVDQVVGADIVSAYG--GKV 452
Query: 205 KLIDSGNTTTTEKIVDRI 222
K++ ++T IV++I
Sbjct: 453 KVLGLVENSSTTAIVEKI 470
>sp|B7V388|HLDE_PSEA8 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain LESB58)
GN=hldE PE=3 SV=1
Length = 473
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL E R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAVQREQGSERGVLGLEQLLLAIEDARAHGE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIVG++ D V KG G PI ++ R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRR 395
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCR----GLAAVLPDETGRDPYSEAKK 200
+ + VD VV A T +L Q+R D++ + G+ V+ + + E +
Sbjct: 396 MAVLAGLGAVDWVVSFAEDT-PERLLEQVRPDVLVKGGDYGVEQVVGAQIVKAYGGEVRV 454
Query: 201 LGKFKLIDSGNTTTTEKIVDR 221
LG + +S T EKI R
Sbjct: 455 LGLVE--NSSTTAIVEKIRQR 473
>sp|B1J331|HLDE_PSEPW Bifunctional protein HldE OS=Pseudomonas putida (strain W619)
GN=hldE PE=3 SV=1
Length = 473
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAIDDARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++LSQ++ D++ +G + G D G
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLSQVKPDVLVKGGDYGIDQVVGADIVKGYG--GTV 452
Query: 205 KLIDSGNTTTTEKIVDRI 222
K++ ++T IV++I
Sbjct: 453 KVLGLVENSSTTAIVEKI 470
>sp|Q02F21|HLDE_PSEAB Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=hldE PE=3 SV=1
Length = 474
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL E R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAVQREQGSERGVLGLEQLLLAIEDARAHGE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIVG++ D V KG G PI ++ R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRR 395
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCR----GLAAVLPDETGRDPYSEAKK 200
+ + VD VV A T +L Q+R D++ + G+ V+ + + E +
Sbjct: 396 MAVLAGLGAVDWVVSFAEDT-PERLLEQVRPDVLVKGGDYGVEQVVGAQIVKAYGGEVRV 454
Query: 201 LGKFKLIDSGNTTTTEKI 218
LG + +S T EKI
Sbjct: 455 LGLVE--NSSTTAIVEKI 470
>sp|Q1I411|HLDE_PSEE4 Bifunctional protein HldE OS=Pseudomonas entomophila (strain L48)
GN=hldE PE=3 SV=1
Length = 473
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S S Q LL + R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLSLEQLLLAIDDARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
IV+ +G +D+ H GH+ +LE+A+ GD LIV I+ D V+ KG G PI N +R
Sbjct: 340 ----TIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAINDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++L Q++ D++ +G + G D G
Sbjct: 395 RMAVLAGLGAVDWVISFPEATPENLLRQVKPDVLVKGGDYGIDQVVGADIVKAYG--GTV 452
Query: 205 KLIDSGNTTTTEKIVDRIVFH 225
K++ ++T IV++I H
Sbjct: 453 KVLGLVENSSTTAIVEKIRKH 473
>sp|A6VDB5|HLDE_PSEA7 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain PA7)
GN=hldE PE=3 SV=1
Length = 474
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL E R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAVQREQGSERGVLGLEQLLLAIEDARAHGE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIVG++ D V KG G PI ++ R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDDASVTRLKGAGRPINSVDRR 395
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCR----GLAAVLPDETGRDPYSEAKK 200
+ + VD VV A T +L Q+R D++ + G+ V+ + + E +
Sbjct: 396 MAVLAGLGAVDWVVSFAEDT-PERLLEQVRPDVLVKGGDYGVEQVVGAQIVKAYGGEVRV 454
Query: 201 LGKFKLIDSGNTTTTEKI 218
LG + +S T EKI
Sbjct: 455 LGLVE--NSSTTAIVEKI 470
>sp|Q88D93|HLDE_PSEPK Bifunctional protein HldE OS=Pseudomonas putida (strain KT2440)
GN=hldE PE=3 SV=1
Length = 473
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAIDDARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++LSQ++ D++ +G + G D G
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLSQVKPDVLVKGGDYGIDQVVGADIVKGYG--GTV 452
Query: 205 KLIDSGNTTTTEKIVDRI 222
K++ ++T IV++I
Sbjct: 453 KVLGLVENSSTTAIVEKI 470
>sp|A5W9W6|HLDE_PSEP1 Bifunctional protein HldE OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=hldE PE=3 SV=1
Length = 473
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAIDDARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++LSQ++ D++ +G + G D G
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLSQVKPDVLVKGGDYGIDQVVGADIVKGYG--GTV 452
Query: 205 KLIDSGNTTTTEKIVDRI 222
K++ ++T IV++I
Sbjct: 453 KVLGLVENSSTTAIVEKI 470
>sp|Q9HUG9|HLDE_PSEAE Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hldE PE=3
SV=1
Length = 474
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL E R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAVQREQGSERGVLGLEQLLLAIEDARAHGE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIVG++ D V KG G PI ++ R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRR 395
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCR----GLAAVLPDETGRDPYSEAKK 200
+ + VD VV A T +L Q+R D++ + G+ V+ + + E +
Sbjct: 396 MAVLAGLGAVDWVVSFAEDT-PERLLEQVRPDVLVKGGDYGVEQVVGAQIVKAYGGEVRV 454
Query: 201 LGKFKLIDSGNTTTTEKI 218
LG + +S T EKI
Sbjct: 455 LGLVE--NSSTTAIVEKI 470
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
V G +D+ H GH+ FL++AK+ GD L+V + D V KG PI +++ER + A
Sbjct: 9 VVTGGVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVEERKGR-RPINSMYERAEVLKA 67
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
K VDEVVIG P I+ +++ QL DI+ G
Sbjct: 68 LKMVDEVVIGEPNCISFEIVKQLNPDIIALG 98
>sp|B0KL32|HLDE_PSEPG Bifunctional protein HldE OS=Pseudomonas putida (strain GB-1)
GN=hldE PE=3 SV=1
Length = 473
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAIDDARAHKE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKF 204
++VLA + VI P ++LSQ++ D++ +G + G D G
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLSQVKPDVLVKGGDYGIDQVVGADIVKAYG--GTV 452
Query: 205 KLIDSGNTTTTEKIVDRI 222
K++ ++T IV++I
Sbjct: 453 KVLGLVENSSTTAIVEKI 470
>sp|Q4ZZ15|HLDE_PSEU2 Bifunctional protein HldE OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=hldE PE=3 SV=1
Length = 474
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAVDDARAHKE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
RIV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N ER
Sbjct: 340 ----RIVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPI-NSVER 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPY----SEAKK 200
++VLA + VI P ++L+ ++ D++ +G + G D E +
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLTHVKPDVLVKGGDYGVDQVVGADIVQAYGGEVRV 454
Query: 201 LGKFKLIDSGNTTTTEKI 218
LG + +S T EKI
Sbjct: 455 LGLVE--NSSTTAIVEKI 470
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 90 IVYVDGAYDLFHPGHLDFLEKAKQ--AGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLS 147
++Y DG YD+ H GH+ LE+AK+ LIVG+ D+ +K G + L ER +
Sbjct: 93 VIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFK--GQVVQTLEERTET 150
Query: 148 VLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG-----------------LAAVLPDET 190
+ ++VDE++ P+ +T + L + ++D V + DE
Sbjct: 151 LKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKSKGKSFSFDEE 210
Query: 191 GRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEK 236
D Y+ K+ GKFK +T ++ RI+ + ++ R+ ++
Sbjct: 211 NEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQR 256
>sp|A6Q4Z6|HLDE_NITSB Bifunctional protein HldE OS=Nitratiruptor sp. (strain SB155-2)
GN=hldE PE=3 SV=1
Length = 462
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 53 YERKARSPYTTCSSQFLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAK 112
YER R T +F+ E+I S+ K RIV+ +G +D+ H GH+ +L+KAK
Sbjct: 301 YERSIRKAPT---EEFIKDFEEIELISKDLH-KRGKRIVFTNGCFDILHLGHVKYLQKAK 356
Query: 113 QAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVI---GAPYTITADM 169
+ GD LIVG++ D V KG PI +R + + + VD VVI PY ++
Sbjct: 357 ELGDVLIVGVNSDASVKRLKGDDRPINPQFDRAYLLASLEAVDYVVIFEEDTPY----EL 412
Query: 170 LSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRI 222
+ ++ DI+ +G + G D E +LID +T IV+R+
Sbjct: 413 IKIVKPDILVKGGDYKGKEVVGSDIAKEV------RLIDFVEGKSTTAIVERM 459
>sp|A4VR47|HLDE_PSEU5 Bifunctional protein HldE OS=Pseudomonas stutzeri (strain A1501)
GN=hldE PE=3 SV=1
Length = 473
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCSSQFLLTT-EKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S + + LLT E R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAVQREEGSERGVMTVEQLLTVVEDARAQGE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD L+V ++ D V+ KG G PI ++ R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLVVAVNDDGSVSRLKGPGRPINSVDRR 395
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
+ + + VD VV A T ++L+Q+R D++ +G
Sbjct: 396 MAVLAGLEAVDWVVCFAEDT-PENLLAQVRPDVLVKG 431
>sp|Q48P39|HLDE_PSE14 Bifunctional protein HldE OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=hldE PE=1 SV=1
Length = 474
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAVDDARAHKE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
++VLA + VI P ++LS ++ D++ +G
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLSHVKPDVLVKG 431
>sp|B5Z7L8|HLDE_HELPG Bifunctional protein HldE OS=Helicobacter pylori (strain G27)
GN=hldE PE=3 SV=1
Length = 463
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 69 LLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVV 128
+L EK+ + E Q K IV+ +G +DL H GH +L+KAK GD LIVG++ D V
Sbjct: 315 ILPLEKLLETLEHNQQK----IVFTNGCFDLLHKGHASYLQKAKALGDILIVGLNSDASV 370
Query: 129 AWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPD 188
KG PI++ +R + + VD VV+ T ++ L+ DI+ +G A L
Sbjct: 371 KRLKGDKRPIVSEKDRAFLLASLSCVDYVVVFEEDT-PIQLIQALKPDILVKG-ADYLNK 428
Query: 189 ETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRI 222
E +++ +L +F G +T I+++I
Sbjct: 429 EVIGSEFAKETRLMEF-----GEGYSTSAIIEKI 457
>sp|Q87VF4|HLDE_PSESM Bifunctional protein HldE OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=hldE PE=3 SV=1
Length = 474
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL + R E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAVDDARAHKE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV ++ D V+ KG G PI N +R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPI-NSVDR 394
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPY----SEAKK 200
++VLA + VI P ++L+ ++ D++ +G + G D E +
Sbjct: 395 RMAVLAGLGAVDWVISFPEGTPENLLTHVKPDVLVKGGDYGIDQVVGADIVQAYGGEVRV 454
Query: 201 LGKFKLIDSGNTTTTEKI 218
LG + +S T EKI
Sbjct: 455 LGLVE--NSSTTAIVEKI 470
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Query: 90 IVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER--VLS 147
+V+ +G +DL H GH+ +L+KA++ GD L++G++ D + KG P+++ ER +L+
Sbjct: 354 VVFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPLISEQERAHILA 413
Query: 148 VLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLI 207
L+C +D VV+ T +++ LR DI+ +G G+D G+ +LI
Sbjct: 414 ALSC--IDYVVVFDEDT-PLELIDTLRPDILVKGGDYTPETVVGKDLVESYG--GRVELI 468
Query: 208 DSGNTTTTEKIVDRIV 223
D + +T I++RI+
Sbjct: 469 DLVDGRSTTNIIERIL 484
>sp|A8EVR4|HLDE_ARCB4 Bifunctional protein HldE OS=Arcobacter butzleri (strain RM4018)
GN=hldE PE=3 SV=2
Length = 476
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCSSQFLLTTEKIRQFSEGRQPK 85
A ++ +VG++ S T+ + YE ++ S + + S+ + T E+I + + +
Sbjct: 286 ANLAAGVVVGKLGSATTT-----LDEIYEYES-SLHKSNSNSHIKTFEEIEKLA-AKLHN 338
Query: 86 PTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERV 145
+IV+ +G +D+ H GH+ +LE+A+ GD LI+G++ D V KG PI N +R
Sbjct: 339 LGKKIVFTNGCFDILHVGHVKYLEEARSYGDVLILGLNADSSVKKLKGESRPINNQDDRA 398
Query: 146 LSVLACKYVDEVVI---GAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLG 202
+ + + VD VVI PY +++ ++ ++ +G D G+D E K +
Sbjct: 399 YILASLESVDYVVIFEEETPY----ELIKLIKPHVLVKGGDYEGKDVVGQDIADELKLV- 453
Query: 203 KFKLIDSGNTTTTEK 217
K +D +TT T K
Sbjct: 454 --KFVDGKSTTNTIK 466
>sp|A4XPU9|HLDE_PSEMY Bifunctional protein HldE OS=Pseudomonas mendocina (strain ymp)
GN=hldE PE=3 SV=1
Length = 473
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 41 TSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDL 99
T+ +A ++ R +R+ S S Q L+ E R E +IV+ +G +D+
Sbjct: 299 TAAISAPELRRAVQREEGSERGVLSLDQLLIAIEDARAHGE--------KIVFTNGCFDI 350
Query: 100 FHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVI 159
H GH+ +LE+A+ GD LIV I+ D V+ KG G PI + R+ + VD VV
Sbjct: 351 LHAGHVTYLEQARAQGDRLIVAINDDASVSRLKGPGRPINAVDRRMAVLAGLGAVDWVVS 410
Query: 160 GAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPY----SEAKKLGKFKLIDSGNTTTT 215
A T +L Q++ D++ +G + G D E + LG + +S T
Sbjct: 411 FAEDT-PERLLKQVQPDVLVKGGDYGIDQVVGADIVQAYGGEVRVLGLVE--NSSTTAIV 467
Query: 216 EKI 218
EKI
Sbjct: 468 EKI 470
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
V V G +D+ H GH+ FL+ AK+ GD LIV + D V KG PI +R + A
Sbjct: 9 VVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGRP-PINPAEDRAEVLKA 67
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
+YVD+VVIG P I+ D++ +L+ D++ G
Sbjct: 68 IRYVDDVVIGKPGEISLDLIKRLKPDVIALG 98
>sp|A7ZE26|HLDE_CAMC1 Bifunctional protein HldE OS=Campylobacter concisus (strain 13826)
GN=hldE PE=3 SV=1
Length = 472
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 62 TTCSSQFLLTTEKIRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVG 121
++ + F + I + E K ++V+ +G +D+ H GH+ +L +A++ GD L+VG
Sbjct: 310 SSFGANFEHKLKSIEELEEILSQKGKKKVVFTNGCFDILHAGHVKYLARARELGDLLVVG 369
Query: 122 IHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
++ D V KG PI + +R + +VD VVI T +++++++ D++ +G
Sbjct: 370 LNSDASVKRLKGEARPINSQDDRACVLSGLGFVDYVVIFDEDT-PLNLITKIKPDVLVKG 428
Query: 182 LAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRI 222
+ G D E +LID +T I+ RI
Sbjct: 429 ADYKGKEVVGSDIVKE------VRLIDFVEGKSTTGIIKRI 463
>sp|Q5HTW1|HLDE_CAMJR Bifunctional protein HldE OS=Campylobacter jejuni (strain RM1221)
GN=hldE PE=3 SV=1
Length = 461
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
+IV+ +G +D+ H GH+ +LEKAK+ GD LIVG++ D V KG P+ + +R +
Sbjct: 331 KIVFTNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACML 390
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
A +VD VVI T +++S L+ DI+ +G
Sbjct: 391 AAFYFVDFVVIFDEDT-PLELISFLKPDILVKG 422
>sp|A7H2L7|HLDE_CAMJD Bifunctional protein HldE OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=hldE PE=3
SV=1
Length = 461
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
+IV+ +G +D+ H GH+ +LEKAK+ GD LIVG++ D V KG P+ + +R +
Sbjct: 331 KIVFTNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKKLKGESRPVNSEFQRACML 390
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
A +VD VVI T +++S L+ DI+ +G
Sbjct: 391 AAFYFVDFVVIFDEDT-PLELISFLKPDILVKG 422
>sp|Q1H3A0|HLDE_METFK Bifunctional protein HldE OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=hldE PE=3 SV=1
Length = 488
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLS 147
+RIV+ +G +DL H GH+ +LE A+ GD L++G++ D V+ KG P+++ +R
Sbjct: 355 ERIVFTNGCFDLLHAGHVTYLEAARNTGDRLVLGLNTDRSVSALKGPSRPVIHEQDRARV 414
Query: 148 VLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
+ A + VD V++ T D+++ +R D++ +G
Sbjct: 415 LAALESVDAVILFDEDT-PIDLINAIRPDVIAKG 447
>sp|A8FMK8|HLDE_CAMJ8 Bifunctional protein HldE OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=hldE PE=3
SV=1
Length = 461
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSV 148
+IV+ +G +D+ H GH+ +LEKAK+ GD LIVG++ D V KG P+ + +R +
Sbjct: 331 KIVFTNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACML 390
Query: 149 LACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
A +VD VVI T +++S L+ DI+ +G
Sbjct: 391 AAFYFVDFVVIFDEDT-PLELISFLKPDILIKG 422
>sp|Q7VM30|HLDE_HAEDU Bifunctional protein HldE OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=hldE PE=3 SV=2
Length = 475
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCSSQFLLTTEKIRQFSEGRQPK 85
A + +VG++ TS NA+++ + + + ++T E+++QF++ + +
Sbjct: 287 ANAAAGIVVGKL--GTSTVNATELENAIHHREETGFG------IVTEERLKQFTKEAKNR 338
Query: 86 PTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERV 145
++IV +G +D+ HPGH+ +LE A++ GD LIV ++ D V KG PI +L R
Sbjct: 339 -GEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNCDQSVKRLKGESRPINSLSAR- 396
Query: 146 LSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
+++LA + VI ++S++ D++ +G
Sbjct: 397 MAILAGLASVDWVIAFEEDTPQRLISEILPDVLVKG 432
>sp|Q3KJ28|HLDE_PSEPF Bifunctional protein HldE OS=Pseudomonas fluorescens (strain Pf0-1)
GN=hldE PE=3 SV=1
Length = 474
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 26 AGVSTTDLVGRMLSMTSQHNASDVARPYERKARSPYTTCS-SQFLLTTEKIRQFSEGRQP 84
A ++ +VG++ T+ +A ++ R +R+ S Q LL R +E
Sbjct: 286 ANLAAGIVVGKL--GTAAISAPELRRAIQREEGSERGVLGLEQLLLAVADARAHNE---- 339
Query: 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHER 144
+IV+ +G +D+ H GH+ +LE+A+ GD LIV I+ D V+ KG G PI ++ R
Sbjct: 340 ----KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAINDDASVSRLKGPGRPINSVDRR 395
Query: 145 VLSVLACKYVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRD---PYSEAKKL 201
+ + VD V+ A T ++L +++ D++ +G + G D Y A K+
Sbjct: 396 MAVLAGLGAVDWVISFAEGT-PENLLREVKPDVLVKGGDYGIDQVVGADIVKAYGGAVKV 454
Query: 202 GKFKLIDSGNTTT-TEKI 218
L+++ +TT EKI
Sbjct: 455 --LGLVENSSTTAIVEKI 470
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 91 VYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA 150
V V G +D+ H GH+ FL+ AK+ GD LIV + D V KG PI +R + A
Sbjct: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRP-PINPAEDRAEVLRA 67
Query: 151 CKYVDEVVIGAPYTITADMLSQLRVDIVCRG 181
+YVD+VVIG P I+ +++ +L+ D++ G
Sbjct: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALG 98
>sp|A5UEH8|HLDE_HAEIG Bifunctional protein HldE OS=Haemophilus influenzae (strain PittGG)
GN=hldE PE=3 SV=1
Length = 476
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLS 147
++IV +G +D+ HPGH+ +LE A++ GD LIV ++ D V KG PI NL R+
Sbjct: 340 EKIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENRMAV 399
Query: 148 VLACKYVDEVVIGAPYT--ITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFK 205
+ VD +V P+T ++ ++ D++ +G P+E A G K
Sbjct: 400 LAGLASVDWLV---PFTEDTPQHLIGEILPDLLVKG-GDYKPEEIAGSKEVWANG-GDVK 454
Query: 206 LIDSGNTTTTEKIVDRI 222
+++ N +T ++++I
Sbjct: 455 VLNFENGCSTTNVIEKI 471
>sp|O05074|HLDE_HAEIN Bifunctional protein HldE OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=hldE PE=3 SV=1
Length = 476
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLS 147
++IV +G +D+ HPGH+ +LE A++ GD LIV ++ D V KG PI NL R+
Sbjct: 340 EKIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENRMAV 399
Query: 148 VLACKYVDEVVIGAPYT--ITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFK 205
+ VD +V P+T ++ ++ D++ +G P+E A G K
Sbjct: 400 LAGLASVDWLV---PFTEDTPQRLIGEILPDLLVKG-GDYKPEEIAGSKEVWANG-GDVK 454
Query: 206 LIDSGNTTTTEKIVDRI 222
+++ N +T ++++I
Sbjct: 455 VLNFENGCSTTNVIEKI 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,694,173
Number of Sequences: 539616
Number of extensions: 4546945
Number of successful extensions: 13125
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 12694
Number of HSP's gapped (non-prelim): 453
length of query: 279
length of database: 191,569,459
effective HSP length: 116
effective length of query: 163
effective length of database: 128,974,003
effective search space: 21022762489
effective search space used: 21022762489
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)