Query psy11147
Match_columns 279
No_of_seqs 272 out of 1782
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 19:13:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11147.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11147hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 1.2E-53 4.1E-58 402.8 18.6 224 5-229 106-341 (341)
2 3hl4_A Choline-phosphate cytid 100.0 2.5E-35 8.6E-40 264.3 16.3 160 83-245 71-232 (236)
3 3elb_A Ethanolamine-phosphate 100.0 4.3E-30 1.5E-34 242.2 16.2 178 87-275 6-184 (341)
4 1coz_A Protein (glycerol-3-pho 99.9 9.7E-23 3.3E-27 165.3 11.7 127 88-223 1-127 (129)
5 3glv_A Lipopolysaccharide core 99.9 2.3E-23 7.9E-28 173.1 7.4 134 87-226 1-139 (143)
6 2b7l_A Glycerol-3-phosphate cy 99.9 1.5E-22 5.2E-27 164.9 11.6 129 88-225 1-129 (132)
7 3nv7_A Phosphopantetheine aden 99.8 6.4E-19 2.2E-23 149.3 7.3 138 88-232 2-148 (157)
8 3k9w_A Phosphopantetheine aden 99.8 3.2E-18 1.1E-22 148.8 11.7 141 88-236 22-172 (187)
9 3op1_A Macrolide-efflux protei 99.7 1.7E-17 5.8E-22 154.3 15.8 134 89-225 21-177 (308)
10 1mrz_A Riboflavin kinase/FMN a 99.7 4.9E-18 1.7E-22 157.0 11.0 131 90-225 1-147 (293)
11 4f3r_A Phosphopantetheine aden 99.7 2.4E-18 8.3E-23 146.3 7.9 140 88-234 5-152 (162)
12 1qjc_A Phosphopantetheine aden 99.7 2.4E-17 8.1E-22 137.3 10.3 130 88-225 1-138 (158)
13 3nd5_A Phosphopantetheine aden 99.7 1.8E-17 6.3E-22 142.1 8.0 150 88-244 2-161 (171)
14 2x0k_A Riboflavin biosynthesis 99.7 1.1E-16 3.6E-21 150.7 13.1 135 89-225 16-174 (338)
15 3nbk_A Phosphopantetheine aden 99.7 5.6E-17 1.9E-21 139.9 9.5 128 85-224 18-156 (177)
16 1o6b_A Phosphopantetheine aden 99.7 1E-16 3.4E-21 135.5 10.6 141 88-236 2-152 (169)
17 3f3m_A Phosphopantetheine aden 99.7 1.2E-16 4E-21 136.7 10.2 131 88-225 3-140 (168)
18 1vlh_A Phosphopantetheine aden 99.7 2.4E-16 8.4E-21 134.7 10.2 129 89-225 13-149 (173)
19 2qtr_A Nicotinate (nicotinamid 99.7 6E-17 2.1E-21 138.8 5.3 145 89-239 3-182 (189)
20 1od6_A PPAT, phosphopantethein 99.6 5.8E-15 2E-19 123.2 14.1 125 88-225 1-139 (160)
21 1kam_A Deamido-NAD(+), nicotin 99.6 1.8E-15 6.3E-20 130.7 11.0 132 89-225 8-171 (194)
22 3do8_A Phosphopantetheine aden 99.6 2.7E-16 9.1E-21 131.8 1.0 129 90-228 2-146 (148)
23 1k4m_A NAMN adenylyltransferas 99.6 1.9E-14 6.5E-19 126.2 11.3 89 90-184 4-110 (213)
24 1ej2_A Nicotinamide mononucleo 99.5 1.9E-13 6.5E-18 117.0 11.6 150 89-253 4-172 (181)
25 1yum_A 'probable nicotinate-nu 99.5 3.5E-13 1.2E-17 121.1 12.4 91 87-183 22-129 (242)
26 2h29_A Probable nicotinate-nuc 99.4 1.5E-13 5E-18 118.3 5.8 151 89-243 3-186 (189)
27 1f9a_A Hypothetical protein MJ 99.4 4.8E-12 1.7E-16 107.0 14.7 148 90-251 2-164 (168)
28 3h05_A Uncharacterized protein 99.4 7.4E-13 2.5E-17 113.8 6.4 150 88-245 2-171 (177)
29 2qjo_A Bifunctional NMN adenyl 99.3 3.6E-12 1.2E-16 117.3 8.4 126 88-225 7-151 (341)
30 1lw7_A Transcriptional regulat 99.2 4.9E-11 1.7E-15 111.8 10.1 128 88-223 2-155 (365)
31 3gmi_A UPF0348 protein MJ0951; 99.2 1.1E-10 3.6E-15 110.6 11.2 89 87-182 51-151 (357)
32 1kqn_A Nmnat, nicotinamide mon 99.1 2.1E-10 7.2E-15 105.0 8.0 71 86-160 6-83 (279)
33 2qjt_B Nicotinamide-nucleotide 99.1 5.5E-10 1.9E-14 103.4 10.7 60 88-151 7-66 (352)
34 1nup_A FKSG76; NAD biosynthesi 99.1 1.4E-10 4.7E-15 104.5 6.1 71 88-160 6-81 (252)
35 2ejc_A Pantoate--beta-alanine 99.0 8.6E-10 2.9E-14 101.2 7.3 71 87-160 21-93 (280)
36 1v8f_A Pantoate-beta-alanine l 98.6 6.4E-09 2.2E-13 95.2 -0.3 68 89-160 20-88 (276)
37 3ag6_A Pantothenate synthetase 98.4 5.3E-08 1.8E-12 89.4 1.1 103 87-194 22-155 (283)
38 3hl4_A Choline-phosphate cytid 98.0 1.3E-06 4.4E-11 78.2 1.7 35 5-39 177-211 (236)
39 3cov_A Pantothenate synthetase 97.6 0.00011 3.9E-09 67.8 7.9 65 95-160 39-105 (301)
40 1jhd_A Sulfate adenylyltransfe 97.6 0.00051 1.7E-08 65.7 11.7 92 87-185 191-299 (396)
41 3uk2_A Pantothenate synthetase 97.5 0.00018 6.3E-09 65.8 7.7 71 87-159 21-92 (283)
42 1v47_A ATP sulfurylase; produc 97.5 0.0005 1.7E-08 64.7 10.8 92 87-185 154-260 (349)
43 3inn_A Pantothenate synthetase 97.2 0.0014 4.6E-08 60.8 9.8 69 86-159 41-113 (314)
44 3q12_A Pantoate--beta-alanine 97.0 0.0019 6.6E-08 59.1 8.6 67 86-159 23-95 (287)
45 3mxt_A Pantothenate synthetase 96.3 0.014 4.7E-07 53.4 9.0 67 87-159 24-94 (285)
46 3n8h_A Pantothenate synthetase 96.0 0.032 1.1E-06 50.4 9.4 70 85-159 21-94 (264)
47 1r6x_A ATP:sulfate adenylyltra 91.3 2.4 8.1E-05 40.3 12.4 93 87-186 186-293 (395)
48 1g8f_A Sulfate adenylyltransfe 90.8 3.4 0.00012 40.4 13.4 93 87-186 187-294 (511)
49 2gks_A Bifunctional SAT/APS ki 86.6 3.9 0.00013 40.1 10.7 92 87-185 162-269 (546)
50 3cr8_A Sulfate adenylyltranfer 85.6 5.8 0.0002 39.0 11.2 92 87-185 162-268 (552)
51 1m8p_A Sulfate adenylyltransfe 72.9 3 0.0001 41.2 4.5 92 87-185 189-295 (573)
52 1x6v_B Bifunctional 3'-phospho 39.1 65 0.0022 32.2 7.4 93 87-186 411-526 (630)
53 3vk5_A MOEO5; TIM barrel, tran 35.6 70 0.0024 28.9 6.3 23 89-114 201-223 (286)
54 3c8z_A Cysteinyl-tRNA syntheta 22.9 43 0.0015 31.3 2.7 21 86-106 37-59 (414)
55 3vzx_A Heptaprenylglyceryl pho 21.7 1.3E+02 0.0043 26.1 5.3 54 88-161 154-209 (228)
56 3nav_A Tryptophan synthase alp 21.5 46 0.0016 29.5 2.5 30 91-120 100-131 (271)
57 2l8k_A NSP7, non-structural pr 21.4 39 0.0013 26.7 1.7 28 73-101 66-94 (123)
58 1li5_A Cysrs, cysteinyl-tRNA s 20.7 45 0.0015 31.8 2.3 22 85-106 19-42 (461)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-53 Score=402.78 Aligned_cols=224 Identities=52% Similarity=0.890 Sum_probs=190.4
Q ss_pred CCCCCCCCCCCCCCeeeeccCCCcchhhHHHHHHhhccCCCCCCCC--------ccc--cccCCCCCcccccccccchhh
Q psy11147 5 PPRPPLIRPWVPTRTMEVQRTAGVSTTDLVGRMLSMTSQHNASDVA--------RPY--ERKARSPYTTCSSQFLLTTEK 74 (279)
Q Consensus 5 ~~~~~~~~~~~~gr~~~vkRT~gVSTTdivgRmL~~~~~~~~~~~~--------~~~--~~~~~~~~~~v~~~fl~t~~~ 74 (279)
.+.|+|.++|+.|||+.++||+|+|||+||+|||++++.|+..... ..+ ++++.+||+++ ++|++++++
T Consensus 106 ~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 184 (341)
T 3elb_A 106 DGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGV-SQFLQTSQK 184 (341)
T ss_dssp TSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC-------------------------------CCCC-CCCCCCHHH
T ss_pred CCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHHHHhhccCccccCCCcce-ecccCCcce
Confidence 3578999999999999999999999999999999999999864211 111 77899999999 999999999
Q ss_pred hhhcccCCCCCCCCeEEEEcCccCCCCHHHHHHHHHHHHcCC--eEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcC
Q psy11147 75 IRQFSEGRQPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGD--YLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACK 152 (279)
Q Consensus 75 i~~fs~~~~~~~~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd--~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k 152 (279)
|.||++|+.|.+++++||++|+||+||.||+++|++|+++|| +|||||++|++++..||+++|+|+++||+++|++|+
T Consensus 185 ~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~ 264 (341)
T 3elb_A 185 IIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACR 264 (341)
T ss_dssp HHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBT
T ss_pred eeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999 999999999999999998789999999999999999
Q ss_pred CccEEEEcCCCCChHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEEEeCCCCCCCHHHHHHHHHHhhhhh
Q psy11147 153 YVDEVVIGAPYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEF 229 (279)
Q Consensus 153 ~VD~Vvi~~p~~~~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~~~~~ISSt~I~~rI~~~r~~y 229 (279)
+||+|++.+||+++.+|++++++++||+|.|+......+.|+|.+++.+|+|..+++.+++|||.|++||++||++|
T Consensus 265 ~vd~V~v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~nr~~~ 341 (341)
T 3elb_A 265 YVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEY 341 (341)
T ss_dssp TCCEEEEEECSSCCHHHHHHTTCSEEEECSSCCCCCTTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC-----
T ss_pred CCCCEEECCCCcchHHHHHhcCCcEEEECCCCccccCCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHHHHhcC
Confidence 99999998899999999999999999999999877667789999999999999999999999999999999999887
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-35 Score=264.28 Aligned_cols=160 Identities=35% Similarity=0.558 Sum_probs=131.3
Q ss_pred CCCCCCeEEEEcCccCCCCHHHHHHHHHHHHc--CCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEc
Q psy11147 83 QPKPTDRIVYVDGAYDLFHPGHLDFLEKAKQA--GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIG 160 (279)
Q Consensus 83 ~~~~~~~iV~v~G~FDlfH~GHi~~L~~A~~~--gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~ 160 (279)
.|.+++++||++|+||+||.||+++|++|+++ ||+|||||++|+.+...|+ +|+|+++||+++|++|++||+|++.
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg--~pi~s~eER~e~v~~~k~VD~Vvv~ 148 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAVQHCRYVDEVVRN 148 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTC--CCSSCHHHHHHHHHTBTTCSEEESS
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCC--CCCCCHHHHHHHHHHhCCCCeEEEC
Confidence 45677889999999999999999999999999 5799999999998877787 5899999999999999999999999
Q ss_pred CCCCChHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEEEeCCCCCCCHHHHHHHHHHhhhhhhhhhhhhhHHH
Q psy11147 161 APYTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHRLEFERRNFEKENKE 240 (279)
Q Consensus 161 ~p~~~~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~~~~~ISSt~I~~rI~~~r~~y~~Rn~~K~~ke 240 (279)
+||+++.+|++++++|+||+|+++.++ ..+.++|...+..|++..+++++++|||.|++||++++..|++||.+|+++.
T Consensus 149 ~p~~l~~d~i~~~~~d~Vv~GDd~~~~-~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~~y~~R~l~rg~~~ 227 (236)
T 3hl4_A 149 APWTLTPEFLAEHRIDFVAHDDIPYSS-AGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTA 227 (236)
T ss_dssp CCSSCCHHHHHHTTCCEEEEESSCCCC-SSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHC------------
T ss_pred CcCcCcHHHHHHcCCCEEEECCccccC-CCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHHHHHHHHhcCCCCH
Confidence 999998999999999999999987665 3346788888999999999999999999999999999999999999999887
Q ss_pred HHHHH
Q psy11147 241 MKLIE 245 (279)
Q Consensus 241 ~~~~~ 245 (279)
.++.-
T Consensus 228 ~~~~~ 232 (236)
T 3hl4_A 228 KELNV 232 (236)
T ss_dssp -----
T ss_pred HHhCC
Confidence 66543
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=242.17 Aligned_cols=178 Identities=31% Similarity=0.488 Sum_probs=133.5
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCCh
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTIT 166 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~~~~ 166 (279)
.+++|+++|+||+||.||+++|++|+++||+|+|||++|+.+...|+ .|+++++||++++++|++||+|++.++|..+
T Consensus 6 ~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~--~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~ 83 (341)
T 3elb_A 6 RAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKG--PPVFTQEERYKMVQAIKWVDEVVPAAPYVTT 83 (341)
T ss_dssp CCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSS--CCSSCHHHHHHHHHHBTTCCEEEETCCSSCC
T ss_pred CceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCC--CCCCCHHHHHHHHHHcCCCCEEEecCCCCCH
Confidence 46789999999999999999999999999999999999998877776 4999999999999999999999998888888
Q ss_pred HHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEEEeCCCCCCCHHHHHHHHHH-hhhhhhhhhhhhhHHHHHHHH
Q psy11147 167 ADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVF-HRLEFERRNFEKENKEMKLIE 245 (279)
Q Consensus 167 ~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~~~~~ISSt~I~~rI~~-~r~~y~~Rn~~K~~ke~~~~~ 245 (279)
.+|++++++|++|+|.||.++. .+.+.|...+.+|++..+++++++|||.|++||+. .+.++..- .......+
T Consensus 84 ~efi~~~~~d~vV~G~D~~~g~-~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~-----~~~~~~~~ 157 (341)
T 3elb_A 84 LETLDKYNCDFCVHGNDITLTV-DGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQ-----EMSSEYRE 157 (341)
T ss_dssp HHHHHHTTCSEEEECSCCCBCT-TSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC----------------------
T ss_pred HHHHHHhCCCEEEECCCCCCCC-CCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhcccccccc-----ccchhhHH
Confidence 9999999999999999999874 34677877788999999999999999999999986 34444221 00111111
Q ss_pred HHHhccccCcCccccccccccccccccccc
Q psy11147 246 LIESSKTGATGMVGATTYATRHTLKATNCN 275 (279)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (279)
.+... .++....++|++.-|+..++.+
T Consensus 158 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 184 (341)
T 3elb_A 158 YADSF---GKCPGGRNPWTGVSQFLQTSQK 184 (341)
T ss_dssp -----------------CCCCCCCCCCHHH
T ss_pred HHHhh---ccCccccCCCcceecccCCcce
Confidence 11111 2234455678888777766543
No 4
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.88 E-value=9.7e-23 Score=165.29 Aligned_cols=127 Identities=27% Similarity=0.325 Sum_probs=104.5
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCChH
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITA 167 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~~~~~ 167 (279)
|+++++.|+||++|.||+.+|++|++++|.++|+++.|+... .|+. .++++.+||++++++|++||.|++..+++...
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNL-QKQK-KAYHSYEHRKLILETIRYVDEVIPEKNWEQKK 78 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHH-HHTC-CCSSCHHHHHHHHTTBTTCCEEEEECCSTTHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHh-cCCC-CCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHH
Confidence 578999999999999999999999999999999999987321 2443 57999999999999998899998876677666
Q ss_pred HHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEEEeCCCCCCCHHHHHHHHH
Q psy11147 168 DMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIV 223 (279)
Q Consensus 168 e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~~~~~ISSt~I~~rI~ 223 (279)
+.+++++++++|.|.||.. +.. ..+..+.+..++.+..||||.||++|.
T Consensus 79 ~~l~~~~~~~iv~G~D~~~------~~~-~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 79 QDIIDHNIDVFVMGDDWEG------KFD-FLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHHHHTTCSEEEEEGGGTT------TTG-GGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHHHHhCCcEEEECCCCCC------cHH-HHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 7788899999999999842 221 123457888899889999999999874
No 5
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.88 E-value=2.3e-23 Score=173.10 Aligned_cols=134 Identities=23% Similarity=0.411 Sum_probs=90.7
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCCh
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTIT 166 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~~~~ 166 (279)
+|++|++.|+||++|.||+.+|++|+++++.++|+++.|+.... ++. .++++.+||++++++|.+||.|++..+.+ .
T Consensus 1 ~m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~-~~l~~~~eR~~~l~~~~~vd~v~~~~~~~-f 77 (143)
T 3glv_A 1 GMIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN-NGK-IPIFDENSRLALISELKVVDRAILGHEGD-M 77 (143)
T ss_dssp CCCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH-TTC-CCSSCHHHHHHHHTTBTTCSEEEECCTTC-H
T ss_pred CceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh-cCC-CCCCCHHHHHHHHHhcCCCCEEEEcCchh-H
Confidence 47899999999999999999999999999999999998876654 433 68999999999999997899999976644 4
Q ss_pred HHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCC-eEEEeC----CCCCCCHHHHHHHHHHhh
Q psy11147 167 ADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLG-KFKLID----SGNTTTTEKIVDRIVFHR 226 (279)
Q Consensus 167 ~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G-~~~~i~----~~~~ISSt~I~~rI~~~r 226 (279)
.+++++++++++|+|.|+.|+. .+........| ...+++ .+..||||.||++|.+.+
T Consensus 78 ~~~~~~l~~~~iv~G~d~~f~~---~~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~ 139 (143)
T 3glv_A 78 MKTVIEVKPDIITLGYDQKFDE---AELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELI 139 (143)
T ss_dssp HHHHHHHCCSEEEECTTCHHHH---HHHHHHHHHHTCCCEEEECCCCC-----------------
T ss_pred HHHHHhcCCCEEEECCCCCCCH---HHHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHh
Confidence 5688899999999999987742 11112222233 233332 246899999999998654
No 6
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.88 E-value=1.5e-22 Score=164.94 Aligned_cols=129 Identities=24% Similarity=0.331 Sum_probs=93.5
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCChH
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITA 167 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~~~~~ 167 (279)
|+++++.|+||++|.||+.+|++|+++++.++|+++.|+... .++. .|+++.+||++++++|.+||.|++..+++...
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQ-IKHK-KSYYDYEQRKMMLESIRYVDLVIPEKGWGQKE 78 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHH-HTTC-CCSSCHHHHHHHHHTBTTCCEEEEECCGGGHH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHh-ccCC-CCCCCHHHHHHHHHhcCCCCEEEECCChHHHH
Confidence 578999999999999999999999999999999999987432 2333 57999999999999998899998865666556
Q ss_pred HHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEEEeCCCCCCCHHHHHHHHHHh
Q psy11147 168 DMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFH 225 (279)
Q Consensus 168 e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~~~~~ISSt~I~~rI~~~ 225 (279)
+.+++++++++|.|.|+.. +.. ..+..|.+..++.+..||||.||++|.+.
T Consensus 79 ~~~~~~~~~~iv~G~D~~~------~~~-~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 79 DDVEKFDVDVFVMGHDWEG------EFD-FLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHHHHTTCCEEEECGGGTT------TTG-GGTTTSEEEECSSCC--------------
T ss_pred HHHHHcCCCEEEECCCCcC------cHH-HHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 6678899999999999842 111 12345788888888899999999998653
No 7
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.76 E-value=6.4e-19 Score=149.31 Aligned_cols=138 Identities=18% Similarity=0.218 Sum_probs=97.3
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCCCh
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYTIT 166 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~~~ 166 (279)
|++++++|+||++|.||++++++|++++|+|+|++..++ .| .|+++.+||+++++. ++++|.|.+..-.+.+
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K---~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~ 74 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK---NPMFSLDERLKMIQLATKSFKNVECVAFEGLL 74 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC---CCCCCHHHHHHHHHHHhcCCCcEEEEecCchH
Confidence 478999999999999999999999999999999999885 34 479999999999997 6889998775323468
Q ss_pred HHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCC-eE--EEeCCC---CCCCHHHHHHHHHH--hhhhhhhh
Q psy11147 167 ADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLG-KF--KLIDSG---NTTTTEKIVDRIVF--HRLEFERR 232 (279)
Q Consensus 167 ~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G-~~--~~i~~~---~~ISSt~I~~rI~~--~r~~y~~R 232 (279)
.+++++++++++|+|.+...+-..+-+.....+..+ .. .++... ..||||.|++.+.. ....|+..
T Consensus 75 ~~~~~~~~~~~ivrG~r~~~D~~ye~~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~ggdv~~~VP~ 148 (157)
T 3nv7_A 75 AYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPK 148 (157)
T ss_dssp HHHHHHTTCCCBCCCCSCCCCHHHHHHHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTTCCCTTTSCT
T ss_pred HHHHHHcCCCEEEECCcccchhhhhHHHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcCCChHHhCCH
Confidence 899999999999999542111000001111122321 11 123333 38999999998763 34444443
No 8
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.76 E-value=3.2e-18 Score=148.81 Aligned_cols=141 Identities=19% Similarity=0.216 Sum_probs=101.5
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCC-CC
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPY-TI 165 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~-~~ 165 (279)
|++++++|+||++|.||+.++++|++++|.|+|++..|+ .| .|+++.+||+++++. ++++|.|++. +| +.
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K---~~l~s~eeR~~ml~~~~~~v~~v~v~-~f~~~ 93 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK---KPFFSLEERLKIANEVLGHYPNVKVM-GFTGL 93 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTCTTEEEE-EESSC
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHHhccCCcEEEE-echhh
Confidence 689999999999999999999999999999999999874 24 479999999999998 6899999875 34 46
Q ss_pred hHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhC--C-eEEEeCC---CCCCCHHHHHHHHHH--hhhhhhhhhhhh
Q psy11147 166 TADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKL--G-KFKLIDS---GNTTTTEKIVDRIVF--HRLEFERRNFEK 236 (279)
Q Consensus 166 ~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~--G-~~~~i~~---~~~ISSt~I~~rI~~--~r~~y~~Rn~~K 236 (279)
+.+++++++++++|+|.+....-..+.....+.+.. + ...++.. ...||||.||+++.. ....|+.....+
T Consensus 94 ~~d~l~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~~i~~lVP~~V~~ 172 (187)
T 3k9w_A 94 LKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEK 172 (187)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTTCCCTTTSCHHHHH
T ss_pred HHHHHHHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcCCChhHHCCHHHHH
Confidence 788999999999999954322100000000112221 2 2223332 258999999999875 345555554443
No 9
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.75 E-value=1.7e-17 Score=154.33 Aligned_cols=134 Identities=15% Similarity=0.223 Sum_probs=104.5
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcCCe-----EEEEEcCChhhhhcc---CCCCCCCCHHHHHHHHHhcCCccEEEEc
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDY-----LIVGIHPDHVVAWYK---GYGYPIMNLHERVLSVLACKYVDEVVIG 160 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~gd~-----LIVgv~~D~~v~~~K---g~~~pi~s~~ER~~~v~~~k~VD~Vvi~ 160 (279)
..|++.|+||++|.||+.+|++|++.|+. +++.+.+++...-.+ ....++++++||+++++++ +||.+++.
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~~ 99 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYLL 99 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEEE
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEEe
Confidence 68999999999999999999999999863 467777776432111 1125799999999999999 69999986
Q ss_pred CCCC------ChHHHHH----hcCCcEEEEcCCCCCCCCCCCChhHHHHhCC-eEEEeC----CCCCCCHHHHHHHHHHh
Q psy11147 161 APYT------ITADMLS----QLRVDIVCRGLAAVLPDETGRDPYSEAKKLG-KFKLID----SGNTTTTEKIVDRIVFH 225 (279)
Q Consensus 161 ~p~~------~~~e~i~----~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G-~~~~i~----~~~~ISSt~I~~rI~~~ 225 (279)
||+ .+++|++ +++++.+|+|.||.||. ..+|...+.+... ....++ .+..||||.||+.|.+-
T Consensus 100 -~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~G 177 (308)
T 3op1_A 100 -DFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDG 177 (308)
T ss_dssp -CCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHHT
T ss_pred -cCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHcC
Confidence 676 4566664 68999999999999998 7777755555432 355555 35789999999998753
No 10
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.74 E-value=4.9e-18 Score=157.01 Aligned_cols=131 Identities=18% Similarity=0.143 Sum_probs=100.5
Q ss_pred EEEEcCccCCCCHHHHHHHHHHHHcCCe-----EEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCC-
Q psy11147 90 IVYVDGAYDLFHPGHLDFLEKAKQAGDY-----LIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPY- 163 (279)
Q Consensus 90 iV~v~G~FDlfH~GHi~~L~~A~~~gd~-----LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~- 163 (279)
+|++.|+||++|.||+.+|++|+++|+. +++.+.+++.+...+ .+.|+++++||+++++++. + +++. ||
T Consensus 1 ~vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~-~~~~l~~~~eR~~ll~~lg-~--~~v~-~F~ 75 (293)
T 1mrz_A 1 MVVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPD-FPGLLMTVESRVEMLSRYA-R--TVVL-DFF 75 (293)
T ss_dssp -CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTT-CCCBSSCHHHHHHHHTTTS-C--EEEE-CHH
T ss_pred CEEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCC-CCCCCCCHHHHHHHHHhCC-C--EEEE-EhH
Confidence 3788999999999999999999998873 577777766332222 2357999999999999995 3 3332 44
Q ss_pred ----CChHHHHHh--cCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEEEeC----CCCCCCHHHHHHHHHHh
Q psy11147 164 ----TITADMLSQ--LRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFKLID----SGNTTTTEKIVDRIVFH 225 (279)
Q Consensus 164 ----~~~~e~i~~--~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~----~~~~ISSt~I~~rI~~~ 225 (279)
..+++|++. ++++++|+|.||.+|....++...+.+.++....++ .+..||||.||+.|.+-
T Consensus 76 ~~a~ls~~~Fi~~ill~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 76 RIKDLTPEGFVERYLSGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp HHTTCCHHHHHHHHCTTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred HhhcCCHHHHHHHHhcCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 466889888 999999999999998765667755655555666676 34689999999998754
No 11
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.74 E-value=2.4e-18 Score=146.34 Aligned_cols=140 Identities=18% Similarity=0.179 Sum_probs=93.8
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCCCChH
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYTITA 167 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~~~~~ 167 (279)
|++++++|+||++|.||++++++|++++|+|+|+++.|+ .| .|+++.+||+++++.+...|.|.+....+.+.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K---~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK---DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-------------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 578999999999999999999999999999999999875 34 48999999999999754448887653335788
Q ss_pred HHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHh--CCe-EEEeCC---CCCCCHHHHHHHHHH--hhhhhhhhhh
Q psy11147 168 DMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKK--LGK-FKLIDS---GNTTTTEKIVDRIVF--HRLEFERRNF 234 (279)
Q Consensus 168 e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~--~G~-~~~i~~---~~~ISSt~I~~rI~~--~r~~y~~Rn~ 234 (279)
+++++++++++|+|.+....-..+.....+.+. .+. ..++.. ...||||.|++++.. ....|+....
T Consensus 78 ~~~~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~~i~~~VP~~V 152 (162)
T 4f3r_A 78 DFAKTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGGDVSPFVPPLV 152 (162)
T ss_dssp HHHHHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTTCCCTTTSCHHH
T ss_pred HHHHHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcCCChhHhCCHHH
Confidence 999999999999995422100000000011122 121 222222 248999999998874 3344444433
No 12
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.71 E-value=2.4e-17 Score=137.30 Aligned_cols=130 Identities=21% Similarity=0.278 Sum_probs=95.3
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-C
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYT-I 165 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~-~ 165 (279)
++++++.|+||++|.||+.++++|++.+|.++|.++.++ .| .++++.++|+++++. +.++|.+++. +|+ .
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k---~~~~~~~~R~~ml~~a~~~~~~v~v~-~~~~~ 72 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK---KPMFTLEERVALAQQATAHLGNVEVV-GFSDL 72 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS---CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSC
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC---CCCCCHHHHHHHHHHHHhcCCCeEEc-ccchH
Confidence 468999999999999999999999999999988888775 24 268999999999995 7899988775 343 5
Q ss_pred hHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhC--C--eEEEeCCC--CCCCHHHHHHHHHHh
Q psy11147 166 TADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKL--G--KFKLIDSG--NTTTTEKIVDRIVFH 225 (279)
Q Consensus 166 ~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~--G--~~~~i~~~--~~ISSt~I~~rI~~~ 225 (279)
+.+++++++++++|+|.|+.++.........+.+.. + ....++.. ..||||.||++|.+.
T Consensus 73 ~~~~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 73 MANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp HHHHHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 778899999999999998765311000000011221 1 22333332 479999999999754
No 13
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.70 E-value=1.8e-17 Score=142.09 Aligned_cols=150 Identities=17% Similarity=0.248 Sum_probs=100.0
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEE-cCCCCC
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVI-GAPYTI 165 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi-~~p~~~ 165 (279)
|++++++|+||++|.||+.++++|++++|.|+|++..++ .| .|+++.+||+++++. ++.++.|.+ ..--+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK---QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-------------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC---CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 478999999999999999999999999999999998764 34 378999999999985 688998877 532257
Q ss_pred hHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHh----CCeEEEeCC--CCCCCHHHHHHHHHH--hhhhhhhhhhhhh
Q psy11147 166 TADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKK----LGKFKLIDS--GNTTTTEKIVDRIVF--HRLEFERRNFEKE 237 (279)
Q Consensus 166 ~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~----~G~~~~i~~--~~~ISSt~I~~rI~~--~r~~y~~Rn~~K~ 237 (279)
+.+++++++++++|+|.|....-........+.+. .+.+..++. ...||||.||+++.. .-..++.....+.
T Consensus 75 tvd~~~~l~~~~~i~G~~~~~d~~~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g~~i~~lVP~~V~~~ 154 (171)
T 3nd5_A 75 TVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHA 154 (171)
T ss_dssp HHHHHHHHTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTTCCCGGGSCHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCchhhhHHHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcCCChhHhCCHHHHHH
Confidence 89999999999999996532210000000001111 112323332 248999999999875 3455666655555
Q ss_pred HHHHHHH
Q psy11147 238 NKEMKLI 244 (279)
Q Consensus 238 ~ke~~~~ 244 (279)
.+|...|
T Consensus 155 i~~~~~y 161 (171)
T 3nd5_A 155 LKQKKND 161 (171)
T ss_dssp HHHC---
T ss_pred HHHhhcc
Confidence 4444333
No 14
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.69 E-value=1.1e-16 Score=150.75 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=100.2
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcCCe-----EEEEEcCChhhhhc-cCCCCCCCCHHHHHHHHHhcCCccEEEEcCC
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDY-----LIVGIHPDHVVAWY-KGYGYPIMNLHERVLSVLACKYVDEVVIGAP 162 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~gd~-----LIVgv~~D~~v~~~-Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p 162 (279)
.+|++.|+||++|.||+.+|++|++.++. +++.+.+++..... .....++++++||+++++++ +||.|++. |
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v~-~ 93 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLVI-D 93 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEEE-C
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEEc-c
Confidence 58999999999999999999999998863 35555555532111 11125699999999999998 69999886 5
Q ss_pred CC------ChHHHHHh-----cCCcEEEEcCCCCCCCCCCCChhHHHHhC--C-eEEEeCC----CCCCCHHHHHHHHHH
Q psy11147 163 YT------ITADMLSQ-----LRVDIVCRGLAAVLPDETGRDPYSEAKKL--G-KFKLIDS----GNTTTTEKIVDRIVF 224 (279)
Q Consensus 163 ~~------~~~e~i~~-----~~id~vV~G~d~~~~~~~~~d~~~~~k~~--G-~~~~i~~----~~~ISSt~I~~rI~~ 224 (279)
|+ .+++|++. ++++++|+|.|+.||....++...+.+.. | ....++. +..||||.||+.|.+
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 64 55678764 68999999999999976666664444332 3 4445553 568999999999865
Q ss_pred h
Q psy11147 225 H 225 (279)
Q Consensus 225 ~ 225 (279)
-
T Consensus 174 G 174 (338)
T 2x0k_A 174 G 174 (338)
T ss_dssp T
T ss_pred C
Confidence 3
No 15
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.69 E-value=5.6e-17 Score=139.94 Aligned_cols=128 Identities=17% Similarity=0.228 Sum_probs=95.6
Q ss_pred CCCCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCC
Q psy11147 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPY 163 (279)
Q Consensus 85 ~~~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~ 163 (279)
..+|++++++|+|||+|.||++++++|++++|+|+|++..++ .| .++++.+||+++++. ++..+.|.+..-.
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K---~~~~s~eeR~~mv~~a~~~~~~v~V~~~e 90 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK---TGMFDLDERIAMVKESTTHLPNLRVQVGH 90 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS---CCSSCHHHHHHHHHHHCTTCTTEEEEECC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC---CCCCCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 456899999999999999999999999999999999999875 34 378999999999995 7888888776433
Q ss_pred CChHHHHHhcCCcEEEEcCCCCCCCCCCCChhHH-----HHh-CC-e-EEEeCC--CCCCCHHHHHHHHHH
Q psy11147 164 TITADMLSQLRVDIVCRGLAAVLPDETGRDPYSE-----AKK-LG-K-FKLIDS--GNTTTTEKIVDRIVF 224 (279)
Q Consensus 164 ~~~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~-----~k~-~G-~-~~~i~~--~~~ISSt~I~~rI~~ 224 (279)
+.+.+++++++++++|+|.+...+- .|+. .+. .+ . ...... ...||||.|++++..
T Consensus 91 ~l~vd~~~~~~a~~ivrGlr~~~Df-----eye~~~a~~nr~l~~ietvfl~~~~~~~~ISST~IRe~~~~ 156 (177)
T 3nbk_A 91 GLVVDFVRSCGMTAIVKGLRTGTDF-----EYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAML 156 (177)
T ss_dssp SCHHHHHHHTTCCEEEEEECTTCCH-----HHHHHHHHHHHHHHCCEEEEEECCGGGSSCCHHHHHHHHHT
T ss_pred chHHHHHHHcCCCEEEECCCchhHH-----HHHHHHHHHHHhcCCCceEEEeCCCcccccchHHHHHHHHc
Confidence 5789999999999999996543210 1211 111 12 1 222322 257999999998764
No 16
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.69 E-value=1e-16 Score=135.54 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=99.7
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-C
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYT-I 165 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~-~ 165 (279)
++++++.|+||++|.||+.++++|++.+|.++|.+..++ .| .++++.+||+++++. +.++|.+.+. +|+ .
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k---~~l~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 73 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK---KPLFSVEERCELLREVTKDIPNITVE-TSQGL 73 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS---CCSSCHHHHHHHHHHHHTTCTTEEEE-ECSSC
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc---CCCCCHHHHHHHHHHHHhcCCCEEEc-ccchH
Confidence 368999999999999999999999999999888887653 24 368999999999995 5789988775 453 6
Q ss_pred hHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhC--C-e-EEEeCC--CCCCCHHHHHHHHHHh--hhhhhhhhhhh
Q psy11147 166 TADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKL--G-K-FKLIDS--GNTTTTEKIVDRIVFH--RLEFERRNFEK 236 (279)
Q Consensus 166 ~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~--G-~-~~~i~~--~~~ISSt~I~~rI~~~--r~~y~~Rn~~K 236 (279)
+.++++.+++++++.|.|+.++.....+.....+.. | . ...++. ...||||.||++|.+. ...++.....+
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G~~~~~~vP~~V~~ 152 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYDGSVSEFVPPEVEL 152 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTTCCCTTTSCHHHHH
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcCCChhHHCCHHHHH
Confidence 778889999999999999876421111111112221 2 1 222332 3479999999999764 23344444333
No 17
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.68 E-value=1.2e-16 Score=136.70 Aligned_cols=131 Identities=22% Similarity=0.255 Sum_probs=92.3
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCCCh
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYTIT 166 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~~~ 166 (279)
+++++++|+||++|.||+.++++|++++|.|+|++..++ .| .++++.++|+++++. ++.++.|.+..-.+.+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK---EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC------------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC---CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 478999999999999999999999999999999999765 34 378999999999996 5788888765322478
Q ss_pred HHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhC----CeEEEeCCC--CCCCHHHHHHHHHHh
Q psy11147 167 ADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKL----GKFKLIDSG--NTTTTEKIVDRIVFH 225 (279)
Q Consensus 167 ~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~----G~~~~i~~~--~~ISSt~I~~rI~~~ 225 (279)
.+++++++++++|.|.|....-..+.....+.+.. .....++.. ..||||.||+++...
T Consensus 76 vd~~~~l~~~~~I~G~d~~~d~~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 76 VDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HHHHHHHTCCEEEEEECTTCCHHHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEcCCchhhhhHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 89999999999999976432200000000011211 122233322 349999999998754
No 18
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.66 E-value=2.4e-16 Score=134.72 Aligned_cols=129 Identities=22% Similarity=0.241 Sum_probs=92.9
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHH-hcCCccEEEEcCCC-CCh
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVL-ACKYVDEVVIGAPY-TIT 166 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~-~~k~VD~Vvi~~p~-~~~ 166 (279)
-+++++|+|||+|.||+.++++|++++|.|+|++.+++ .| +++++.++|+++++ +++.++.|.+. +| +.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k---k~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~t 84 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK---KCMFTLEERKKLIEEVLSDLDGVKVD-VHHGLL 84 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC---CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSCH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC---CCCCCHHHHHHHHHHHhcCCCCEEEe-cCcchH
Confidence 57999999999999999999999999999999999974 23 37899999999998 68889988775 33 368
Q ss_pred HHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhC--C--eEEEeCC--CCCCCHHHHHHHHHHh
Q psy11147 167 ADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKL--G--KFKLIDS--GNTTTTEKIVDRIVFH 225 (279)
Q Consensus 167 ~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~--G--~~~~i~~--~~~ISSt~I~~rI~~~ 225 (279)
.++++.+++++++.|.................+.+ + .+..++. ...||||.||+++...
T Consensus 85 vd~l~~l~~~~~i~gl~~w~d~~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 85 VDYLKKHGIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTSCHHHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHhCCCeEEeCCCcccchhhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 89999999999999853211100000000011221 1 1222322 2469999999998753
No 19
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.65 E-value=6e-17 Score=138.77 Aligned_cols=145 Identities=14% Similarity=0.012 Sum_probs=100.1
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcC--CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAG--DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYT- 164 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~g--d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~- 164 (279)
+++++.|+||++|.||+.++++|++.+ |.++|.+++++. .|.. .++++.+||+++++. ++++|.+.+. +|+
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~ml~~~~~~~~~v~v~-~~e~ 77 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQG-RNITSVESRLQMLELATEAEEHFSIC-LEEL 77 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTT-SCCCCHHHHHHHHHHHHTTCTTEEEC-CTGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccC-CCCCCHHHHHHHHHHHhCCCCCEEEe-hHHh
Confidence 689999999999999999999999998 889999998763 2432 368999999999995 7889998885 454
Q ss_pred ------ChHHHHHhcCCcE------EEEcCCCCCCCCCCCChhHHHHhCCeEE----------------EeC-CCCCCCH
Q psy11147 165 ------ITADMLSQLRVDI------VCRGLAAVLPDETGRDPYSEAKKLGKFK----------------LID-SGNTTTT 215 (279)
Q Consensus 165 ------~~~e~i~~~~id~------vV~G~d~~~~~~~~~d~~~~~k~~G~~~----------------~i~-~~~~ISS 215 (279)
.+.+.++.++..+ +|+|.|+.++-....+...+.+ .+.+. .++ ....|||
T Consensus 78 ~~~~~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~w~~~~~l~~-~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSS 156 (189)
T 2qtr_A 78 SRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLD-LVTFVGVARPGYKLRTPYPITTVEIPEFAVSS 156 (189)
T ss_dssp GSCSCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGSTTHHHHTT-TCEEEEECCTTCCCCCSSCCEEECCCCCCCCH
T ss_pred cCCCCCCHHHHHHHHHHHCCCCCEEEEEehhhhhhhhccCCHHHHHH-hCCEEEEECCCCCccCCceEEEEcCCCCccCH
Confidence 5667777776555 9999997765332233322221 22222 222 2358999
Q ss_pred HHHHHHHHHh--hhhhhhhhhhhhHH
Q psy11147 216 EKIVDRIVFH--RLEFERRNFEKENK 239 (279)
Q Consensus 216 t~I~~rI~~~--r~~y~~Rn~~K~~k 239 (279)
|.||++|.+. ...++.....+.-+
T Consensus 157 T~IR~~l~~g~~~~~lvP~~V~~yI~ 182 (189)
T 2qtr_A 157 SLLRERYKEKKTCKYLLPEKVQVYIE 182 (189)
T ss_dssp HHHHHHHHTTCCCTTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCchhcCCHHHHHHHH
Confidence 9999999753 23344444333333
No 20
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.62 E-value=5.8e-15 Score=123.17 Aligned_cols=125 Identities=18% Similarity=0.299 Sum_probs=90.5
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-C
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYT-I 165 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~-~ 165 (279)
|+ +++.|+||++|.||+.++++|++.+|.++|.++.++ .|.. .++++.++|+++++. +.++|.+.+. +|+ .
T Consensus 1 m~-~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 73 (160)
T 1od6_A 1 MH-VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRG-QYLFSAEERLAIIREATAHLANVEAA-TFSGL 73 (160)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC----------CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSC
T ss_pred Ce-EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCC-CCCCCHHHHHHHHHHHhcCCCCEEEE-ecCch
Confidence 45 889999999999999999999999999888888664 2321 368999999999985 6789988765 343 6
Q ss_pred hHHHHHhcCCcEEEEcCCCCCCCCCCCChhHH------HHhC--C--eEEEeCC--CCCCCHHHHHHHHHHh
Q psy11147 166 TADMLSQLRVDIVCRGLAAVLPDETGRDPYSE------AKKL--G--KFKLIDS--GNTTTTEKIVDRIVFH 225 (279)
Q Consensus 166 ~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~------~k~~--G--~~~~i~~--~~~ISSt~I~~rI~~~ 225 (279)
+.+++++++++++|.|.|.. .+...+ .+.. + ....++. ...||||.||++|...
T Consensus 74 ~~~~l~~l~~~~~v~G~d~~------~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 74 LVDFVRRVGAQAIVKGLRAV------SDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHHTTCSEEEEEECTT------SCHHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeCCcc------cchHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 77888999999999998732 222111 2222 1 2222332 2579999999999753
No 21
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.62 E-value=1.8e-15 Score=130.71 Aligned_cols=132 Identities=14% Similarity=0.027 Sum_probs=87.9
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcC--CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcCCCC-
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAG--DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGAPYT- 164 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~g--d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~p~~- 164 (279)
+++++.|+||++|.||+.++++|++.+ |.++|+++.++. .|.. .++++.++|+++++. ++++|.+.+. +|+
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~ 82 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQN-EDYTDSFHRVEMLKLAIQSNPSFKLE-LVEM 82 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC-------------CHHHHHHHHHHHHTTCTTEEEC-CGGG
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCC-cCCCCHHHHHHHHHHHHcCCCCeEEe-HHHh
Confidence 689999999999999999999999998 789999987652 3421 368999999999984 7889988875 443
Q ss_pred ------ChHHHHHhcCCc------EEEEcCCCCCCCCCCCChhHHHHhC---------------CeEEEeC-CCCCCCHH
Q psy11147 165 ------ITADMLSQLRVD------IVCRGLAAVLPDETGRDPYSEAKKL---------------GKFKLID-SGNTTTTE 216 (279)
Q Consensus 165 ------~~~e~i~~~~id------~vV~G~d~~~~~~~~~d~~~~~k~~---------------G~~~~i~-~~~~ISSt 216 (279)
.+.+.++.++.. ++|+|.|+.++-....+...+.... ..+..++ ....||||
T Consensus 83 ~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~W~~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST 162 (194)
T 1kam_A 83 EREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSST 162 (194)
T ss_dssp STTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHH
T ss_pred cCCCCCChHHHHHHHHHHCCCCcEEEEEecchhhhhccccCHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHH
Confidence 466667665544 9999999876522111111111100 1111222 22489999
Q ss_pred HHHHHHHHh
Q psy11147 217 KIVDRIVFH 225 (279)
Q Consensus 217 ~I~~rI~~~ 225 (279)
.||++|...
T Consensus 163 ~IR~~i~~g 171 (194)
T 1kam_A 163 MIRERFKSK 171 (194)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999764
No 22
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.57 E-value=2.7e-16 Score=131.82 Aligned_cols=129 Identities=17% Similarity=0.252 Sum_probs=86.4
Q ss_pred EEEEcCccCCCCHHHHHHHHHHHHcC-CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-c-CC----ccEEEEcCC
Q psy11147 90 IVYVDGAYDLFHPGHLDFLEKAKQAG-DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-C-KY----VDEVVIGAP 162 (279)
Q Consensus 90 iV~v~G~FDlfH~GHi~~L~~A~~~g-d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~-k~----VD~Vvi~~p 162 (279)
+|+++|+||++|.||+.++++|++++ |.|+|++++|+.... + ..++++.+||+++++. + +. +.-+-+.++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~--~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~ 78 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-R--IRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNP 78 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-H--SCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECST
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-c--CCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCC
Confidence 48899999999999999999999987 899999999986532 2 2489999999999886 3 22 333335667
Q ss_pred CCChHHHHHhcCCcEEEEcCCCCCCCCCCCChhHHHHhCCe----EEEeC-----CCCCCCHHHHHHHHHHhhhh
Q psy11147 163 YTITADMLSQLRVDIVCRGLAAVLPDETGRDPYSEAKKLGK----FKLID-----SGNTTTTEKIVDRIVFHRLE 228 (279)
Q Consensus 163 ~~~~~e~i~~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~----~~~i~-----~~~~ISSt~I~~rI~~~r~~ 228 (279)
|..+. .-.+|++|.+.+...+. .....+.+..|. ...++ .+..||||.||+++++.+..
T Consensus 79 ~g~~~----~~~~d~ivvs~Et~~~~---~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id~~g~ 146 (148)
T 3do8_A 79 YGKTL----DVDFEYLVVSPETYEMA---LKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEIDRYGG 146 (148)
T ss_dssp TTTTT----TSCCSEEEECTTTHHHH---HHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC----
T ss_pred CCCCC----CCCCCEEEEChhhcccH---HHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHhhcCC
Confidence 77653 36899999998764321 111122333343 33333 45789999999999887654
No 23
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.55 E-value=1.9e-14 Score=126.18 Aligned_cols=89 Identities=18% Similarity=0.118 Sum_probs=72.6
Q ss_pred E-EEEcCccCCCCHHHHHHHHHHHHcC--CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHH-hcCCccEEEEcCCCC-
Q psy11147 90 I-VYVDGAYDLFHPGHLDFLEKAKQAG--DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVL-ACKYVDEVVIGAPYT- 164 (279)
Q Consensus 90 i-V~v~G~FDlfH~GHi~~L~~A~~~g--d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~-~~k~VD~Vvi~~p~~- 164 (279)
+ +++.|+||++|.||+.++++|++.+ |.++|.++.++. .|. .++++.++|+++++ +++++|.+.+. +|+
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~--~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~ 77 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRP--QPEANSVQRKHMLELAIADKPLFTLD-EREL 77 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSC--CCSSCHHHHHHHHHHHHTTCTTEEEC-CHHH
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCC--CCCCCHHHHHHHHHHHhccCCCEEEe-HHHh
Confidence 6 8999999999999999999999987 789999987753 242 25899999999998 67889988875 342
Q ss_pred ------ChHHHHHhc----CCc---EEEEcCCC
Q psy11147 165 ------ITADMLSQL----RVD---IVCRGLAA 184 (279)
Q Consensus 165 ------~~~e~i~~~----~id---~vV~G~d~ 184 (279)
.+.++++.+ +++ ++|+|.|.
T Consensus 78 ~~~~~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 78 KRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp HCSSCCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred cCCCCCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 456777654 899 99999864
No 24
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.48 E-value=1.9e-13 Score=117.03 Aligned_cols=150 Identities=16% Similarity=0.091 Sum_probs=101.6
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEE-cCChhhhhccCCCCCCCCHHHHHHHHHhc-CCc----cEEEEcCC
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGI-HPDHVVAWYKGYGYPIMNLHERVLSVLAC-KYV----DEVVIGAP 162 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv-~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~-k~V----D~Vvi~~p 162 (279)
+++++.|+||++|.||+.++++|++.+|.++|++ +.++ ..|. .++++.++|+++++.. ... |.+++. +
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~--~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~-~ 77 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL---SHSI--RDPFTAGERVMMLTKALSENGIPASRYYII-P 77 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEE-E
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC---CcCC--CCCCCHHHHHHHHHHHHhhCCCCCCcEEEE-e
Confidence 5799999999999999999999999999999988 4443 2232 3578999999998864 333 456543 2
Q ss_pred CC------ChHHHHHh--cCCcEEEEcCCCCCCCCCCCChhHHHHhCCe-EEEeCC--CCCCCHHHHHHHHHH--hhhhh
Q psy11147 163 YT------ITADMLSQ--LRVDIVCRGLAAVLPDETGRDPYSEAKKLGK-FKLIDS--GNTTTTEKIVDRIVF--HRLEF 229 (279)
Q Consensus 163 ~~------~~~e~i~~--~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~-~~~i~~--~~~ISSt~I~~rI~~--~r~~y 229 (279)
++ ...++++. ..+++++.|.++. ..+....|. +..++. ...||||.||+++.. ....+
T Consensus 78 ~d~~~~~~~w~~~~~~l~~~~~~~v~gr~~~---------~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G~~i~~l 148 (181)
T 1ej2_A 78 VQDIECNALWVGHIKMLTPPFDRVYSGNPLV---------QRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDGDWRSL 148 (181)
T ss_dssp CCCCSCHHHHHHHHHHHSCCCSEEECCCHHH---------HHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHTCCCGGG
T ss_pred cCccCCHHHHHHHHHHHCCCCCEEEECCHHH---------HHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcCCChhHh
Confidence 22 22334443 3677888886531 112222332 333443 235999999999985 45567
Q ss_pred hhhhhhhhHHHHHHHHHHHhcccc
Q psy11147 230 ERRNFEKENKEMKLIELIESSKTG 253 (279)
Q Consensus 230 ~~Rn~~K~~ke~~~~~~~~~~~~~ 253 (279)
+.....+-.++...|++++....+
T Consensus 149 vP~~V~~yI~~~~l~~~~~~l~~~ 172 (181)
T 1ej2_A 149 LPESVVEVIDEINGVERIKHLAKK 172 (181)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHC--
T ss_pred CCHHHHHHHHHcCChHHHHHHHhc
Confidence 787788888888888888776544
No 25
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.46 E-value=3.5e-13 Score=121.07 Aligned_cols=91 Identities=22% Similarity=0.266 Sum_probs=73.9
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcC--CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHH-hcCCccEEEEcCCC
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAG--DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVL-ACKYVDEVVIGAPY 163 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~g--d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~-~~k~VD~Vvi~~p~ 163 (279)
.++++++.|+||++|.||+.++++|++.+ |.|+|++..++. .|. .++++.++|+++++ ++..++.|.+. +|
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~--~~~~~~~~R~~ml~~a~~~~~~v~v~-~~ 95 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRE--TPQVSAAQRLAMVERAVAGVERLTVD-PR 95 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGS--CTTCCHHHHHHHHHHHHTTCTTEEEC-CG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCC--CCCCCHHHHHHHHHHHhcCCCeEEEe-ee
Confidence 35789999999999999999999999988 899999998852 242 36899999999999 57889988885 34
Q ss_pred -------CChHHHHHhc----CCc---EEEEcCC
Q psy11147 164 -------TITADMLSQL----RVD---IVCRGLA 183 (279)
Q Consensus 164 -------~~~~e~i~~~----~id---~vV~G~d 183 (279)
..+.+.++.+ +++ ++|.|.|
T Consensus 96 e~~~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 96 ELQRDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp GGGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred eecCCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 3677777544 677 7888985
No 26
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.41 E-value=1.5e-13 Score=118.28 Aligned_cols=151 Identities=13% Similarity=0.026 Sum_probs=94.3
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcC--CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEcC----
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAG--DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIGA---- 161 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~g--d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~~---- 161 (279)
+++++.|+||++|.||+.++++|++.+ |.+++..+++.. .|+. .++++.++|+++++. ++..+.+.+.+
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~ 78 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKH-HDFIDVQHRLTMIQMIIDELGFGDICDDEIK 78 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCC-CSSCCCHHHHHHHHHHHHHHTCCEECCHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcC-CCCCCHHHHHHHHHHHHcCCCCEEEehHHhc
Confidence 688999999999999999999999887 788887777653 3432 468999999999984 66667666641
Q ss_pred --CCCChHHHHH---hcCCc---EEEEcCCCCCCCCCCCChhHHHHhCC---------------eEEEeC-CCCCCCHHH
Q psy11147 162 --PYTITADMLS---QLRVD---IVCRGLAAVLPDETGRDPYSEAKKLG---------------KFKLID-SGNTTTTEK 217 (279)
Q Consensus 162 --p~~~~~e~i~---~~~id---~vV~G~d~~~~~~~~~d~~~~~k~~G---------------~~~~i~-~~~~ISSt~ 217 (279)
....+.+.++ +..++ ++|.|.|....-....+...+..... .+..++ ....||||.
T Consensus 79 ~~~~syt~dtl~~l~~~~p~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISST~ 158 (189)
T 2h29_A 79 RGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTM 158 (189)
T ss_dssp HCSBCCHHHHHHHHHHHSTTEEEEEEEEHHHHTTGGGSTTHHHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCcEEEEEecchhhhhccccCHHHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCHHH
Confidence 1124555554 33355 88999875332111112212221111 111221 125799999
Q ss_pred HHHHHHHh--hhhhhhhhhhhhHHHHHH
Q psy11147 218 IVDRIVFH--RLEFERRNFEKENKEMKL 243 (279)
Q Consensus 218 I~~rI~~~--r~~y~~Rn~~K~~ke~~~ 243 (279)
||+++... ...++.....+.-++..+
T Consensus 159 IR~~i~~g~~~~~lvP~~V~~yI~~~~L 186 (189)
T 2h29_A 159 IRQRVSEGKSIQVLVPKSVENYIKGEGL 186 (189)
T ss_dssp HHHHHHTTCCCBTTBCHHHHHHHHHHTT
T ss_pred HHHHHHcCCChhhcCCHHHHHHHHHhCC
Confidence 99999764 334555554444444333
No 27
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.41 E-value=4.8e-12 Score=107.01 Aligned_cols=148 Identities=19% Similarity=0.154 Sum_probs=95.0
Q ss_pred EEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEE-cCChhhhhccCCCCCCCCHHHHHHHHHh-cCCcc-EEEE--cCCCC
Q psy11147 90 IVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGI-HPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVD-EVVI--GAPYT 164 (279)
Q Consensus 90 iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv-~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD-~Vvi--~~p~~ 164 (279)
++++.|+||++|.||+.++++|++.+|.++|++ +.++ ..|. .+.++.++|+++++. ++..+ .+.+ .+.+.
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~--~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~ 76 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTL--ENPFTAGERILMITQSLKDYDLTYYPIPIKDIE 76 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSS--SCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCS
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC---CCCC--CCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcc
Confidence 688999999999999999999999999999988 5443 2232 245799999999985 56666 5543 22221
Q ss_pred ---ChHHHHHh--cCCcEEEEcCCCCCCCCCCCChhHHHHhCCeEE-EeCCC--CCCCHHHHHHHHHH--hhhhhhhhhh
Q psy11147 165 ---ITADMLSQ--LRVDIVCRGLAAVLPDETGRDPYSEAKKLGKFK-LIDSG--NTTTTEKIVDRIVF--HRLEFERRNF 234 (279)
Q Consensus 165 ---~~~e~i~~--~~id~vV~G~d~~~~~~~~~d~~~~~k~~G~~~-~i~~~--~~ISSt~I~~rI~~--~r~~y~~Rn~ 234 (279)
...++++. ...++++.|.++ ...+....+... .++.. ..||||.||+++.. ....++....
T Consensus 77 ~~~~w~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g~~i~~lvP~~V 147 (168)
T 1f9a_A 77 FNSIWVSYVESLTPPFDIVYSGNPL---------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNGEKWEHLVPKAV 147 (168)
T ss_dssp CGGGHHHHHHHHSCCCSEEECCCHH---------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHTCCCGGGSCHHH
T ss_pred cHHHHHHHHHHhccCCCEEEECcHH---------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcCCChhHcCCHHH
Confidence 12333332 245666655432 011222333322 22321 25999999999985 3556777777
Q ss_pred hhhHHHHHHHHHHHhcc
Q psy11147 235 EKENKEMKLIELIESSK 251 (279)
Q Consensus 235 ~K~~ke~~~~~~~~~~~ 251 (279)
.+-.++...+++++...
T Consensus 148 ~~yI~~~~l~~~~~~l~ 164 (168)
T 1f9a_A 148 VDVIKEIKGVERLRKLA 164 (168)
T ss_dssp HHHHHHHTHHHHHHHHC
T ss_pred HHHHHHcCChHHHHHHH
Confidence 77777777777776553
No 28
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.35 E-value=7.4e-13 Score=113.84 Aligned_cols=150 Identities=12% Similarity=0.070 Sum_probs=91.9
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCcc--EEEEcC---
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVD--EVVIGA--- 161 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD--~Vvi~~--- 161 (279)
+++++++|+|||+|.||+.+++ |.+..|.|+|++..+. ..| +++.+.++|+++++. ++..+ .+.+.+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k---~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG---KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC---CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 3689999999999999999998 7777799999998752 223 368999999999885 43322 343321
Q ss_pred -----C-CCChHHHHH---hcCC--c-EEEEcCCCCCCCCCCCChhHHHHhCCeEEEeCCCCCCCHHHHHHHHHHhh--h
Q psy11147 162 -----P-YTITADMLS---QLRV--D-IVCRGLAAVLPDETGRDPYSEAKKLGKFKLIDSGNTTTTEKIVDRIVFHR--L 227 (279)
Q Consensus 162 -----p-~~~~~e~i~---~~~i--d-~vV~G~d~~~~~~~~~d~~~~~k~~G~~~~i~~~~~ISSt~I~~rI~~~r--~ 227 (279)
. ...|.+.++ +.-+ + +++.|.|...+-....+...+.+.. .+..+++...||||.||++|.+.+ .
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~-~~vv~~r~~~iSST~IR~~i~~g~~~~ 153 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERW-TVMACPEKVKIRSTDIRNALIEGKDIS 153 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHS-EEEECCCSSCCCHHHHHHHHHHTCCCT
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhC-CEEEEcCCCCCcHHHHHHHHHcCCChh
Confidence 1 234444343 2223 3 5789988543211123443444443 566777778999999999998642 4
Q ss_pred hhhhhhhhhhHHHHHHHH
Q psy11147 228 EFERRNFEKENKEMKLIE 245 (279)
Q Consensus 228 ~y~~Rn~~K~~ke~~~~~ 245 (279)
.++.....+--++..+|.
T Consensus 154 ~lvp~~V~~yI~~~~LY~ 171 (177)
T 3h05_A 154 TYTTPTVSELLLNEGLYR 171 (177)
T ss_dssp TTSCHHHHHHHHC-----
T ss_pred HhCCHHHHHHHHHcCCCC
Confidence 445555555555555553
No 29
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.30 E-value=3.6e-12 Score=117.33 Aligned_cols=126 Identities=15% Similarity=0.120 Sum_probs=81.9
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccE----EEE--cC
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDE----VVI--GA 161 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~----Vvi--~~ 161 (279)
|+++++.|+||++|.||+.++++|++.+|.++|+|..++. ..+. ...++.++|+.+++.+ ..|. +++ ++
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~m~~~~-~~~~~~~~~~~i~~~ 81 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRV--AADT--RNPWRSPERMAMIEAC-LSPQILKRVHFLTVR 81 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETC--CCCS--SSCSCHHHHHHHHHTT-SCHHHHTTEEEEEEE
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCccc--CCCC--CCCCCHHHHHHHHHHH-hhhccCCeEEEEECC
Confidence 4789999999999999999999999999988877776532 1222 2347999999999975 2332 432 32
Q ss_pred CC-C---ChHHH----HHhcC---CcEEEEcCCCCCCCCCCCChhHHHHhC-C-eEEEeCCCCCCCHHHHHHHHHHh
Q psy11147 162 PY-T---ITADM----LSQLR---VDIVCRGLAAVLPDETGRDPYSEAKKL-G-KFKLIDSGNTTTTEKIVDRIVFH 225 (279)
Q Consensus 162 p~-~---~~~e~----i~~~~---id~vV~G~d~~~~~~~~~d~~~~~k~~-G-~~~~i~~~~~ISSt~I~~rI~~~ 225 (279)
.. . ...++ ++.+. .++++.|.+.... .+ ..+.. + ....++....||||.||+++.+.
T Consensus 82 d~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~------~~-~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g 151 (341)
T 2qjo_A 82 DWLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDAS------SY-YLNLFPQWDYLETGHYPDFSSTAIRGAYFEG 151 (341)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGG------GG-GGGSCTTSEEEECCCCTTCCHHHHHHHHHHT
T ss_pred CCcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCC------hH-HHHhccccceeecccCCCCCcHHHHHHHHcC
Confidence 21 1 11233 33332 6888888775321 11 01111 2 33445556899999999999864
No 30
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.19 E-value=4.9e-11 Score=111.79 Aligned_cols=128 Identities=18% Similarity=0.215 Sum_probs=81.9
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhh--cc-CCCCCCCCHHHHHHHHHh-cCCccE-EEEcC-
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAW--YK-GYGYPIMNLHERVLSVLA-CKYVDE-VVIGA- 161 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~--~K-g~~~pi~s~~ER~~~v~~-~k~VD~-Vvi~~- 161 (279)
+++++++|+|||||.||+.++++|++++|+|+|++..++...+ .| .+.+..++.+||+++++. ++..+. |.+..
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~ 81 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHL 81 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEe
Confidence 5789999999999999999999999999999999999874210 01 100124899999999974 566554 43321
Q ss_pred ---CCCC-h------HH----HHH--hcCCcEEEEcCCCCCCCCCCCChhHHHHhCC-eEEEeC---CCCCCCHHHHHHH
Q psy11147 162 ---PYTI-T------AD----MLS--QLRVDIVCRGLAAVLPDETGRDPYSEAKKLG-KFKLID---SGNTTTTEKIVDR 221 (279)
Q Consensus 162 ---p~~~-~------~e----~i~--~~~id~vV~G~d~~~~~~~~~d~~~~~k~~G-~~~~i~---~~~~ISSt~I~~r 221 (279)
+... + .+ ++. .+++++++.+..+. ...+.+..| ....++ ....||||.|++.
T Consensus 82 ~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~--------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~ 153 (365)
T 1lw7_A 82 VEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD--------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTT 153 (365)
T ss_dssp ECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG--------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHC
T ss_pred ccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC--------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhC
Confidence 1111 0 11 223 36778777554321 112334444 333444 2368999999986
Q ss_pred HH
Q psy11147 222 IV 223 (279)
Q Consensus 222 I~ 223 (279)
+.
T Consensus 154 ~~ 155 (365)
T 1lw7_A 154 PF 155 (365)
T ss_dssp GG
T ss_pred hh
Confidence 53
No 31
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=1.1e-10 Score=110.62 Aligned_cols=89 Identities=27% Similarity=0.371 Sum_probs=70.7
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChh--hhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcCCCC
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHV--VAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGAPYT 164 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~--v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~~ 164 (279)
++++|++.|.|||||.||+.+|++|++ .+ ++++|-+-.. +. +|. ..+++.++|.++++++ +||.|++. ||.
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~-~~l~~~~~R~~~~~~~-GvD~viel-pF~ 123 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGI-PYFLNRYIRAEMAIRA-GADIVVEG-PPM 123 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSS-BCSSCHHHHHHHHHHH-TCSEEEEC-CCG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCC-CcCCCHHHHHHHHHHC-CCCEEEEc-Cch
Confidence 447899999999999999999999999 54 5555554433 43 343 4799999999999999 99999987 664
Q ss_pred ---ChHHHHH-------hcCCcEEEEcC
Q psy11147 165 ---ITADMLS-------QLRVDIVCRGL 182 (279)
Q Consensus 165 ---~~~e~i~-------~~~id~vV~G~ 182 (279)
.+.+|++ .++++.||+|.
T Consensus 124 ~~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 124 GIMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GGSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 4556664 47999999998
No 32
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.07 E-value=2.1e-10 Score=105.05 Aligned_cols=71 Identities=23% Similarity=0.254 Sum_probs=52.4
Q ss_pred CCCeEEEEcCccCCCCHHHHHHHHHHHHcCC--e---EEEE-EcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEE
Q psy11147 86 PTDRIVYVDGAYDLFHPGHLDFLEKAKQAGD--Y---LIVG-IHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVV 158 (279)
Q Consensus 86 ~~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd--~---LIVg-v~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vv 158 (279)
+.++++++.|+||++|.||+.++++|++.++ . ++|+ +.+... +..| .++++.++|+++++. +..++.+.
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~-~~~K---~~l~s~~~R~~ml~~ai~~~~~~~ 81 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGD-AYKK---KGLIPAYHRVIMAELATKNSKWVE 81 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCG-GGCC---TTCCCHHHHHHHHHHHTTTCSSEE
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCC-Cccc---cCCCCHHHHHHHHHHHhcCCCcEE
Confidence 3457899999999999999999999998764 2 5543 223221 1223 357999999999985 57888887
Q ss_pred Ec
Q psy11147 159 IG 160 (279)
Q Consensus 159 i~ 160 (279)
+.
T Consensus 82 v~ 83 (279)
T 1kqn_A 82 VD 83 (279)
T ss_dssp EC
T ss_pred Ee
Confidence 75
No 33
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.06 E-value=5.5e-10 Score=103.38 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=50.0
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC 151 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~ 151 (279)
+++++++|+||++|.||+.++++|++++|.|+|+|.+++.. +.. .+.++.++|+++++..
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~---~~~-~~~~~~~~R~~m~~~~ 66 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT---PNI-KNPFSFEQRKQMIESD 66 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC---CCS-SSCSCHHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC---ccc-CCCCCHHHHHHHHHHH
Confidence 37899999999999999999999999999999999886422 111 3568999999998864
No 34
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.06 E-value=1.4e-10 Score=104.50 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=50.2
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcCCe----EEEEEcCChhhhhccCCCCCCCCHHHHHHHHHh-cCCccEEEEc
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAGDY----LIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLA-CKYVDEVVIG 160 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~----LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~-~k~VD~Vvi~ 160 (279)
+++++++|+||++|.||+.++++|++.++. .+||+.-.+.....+. .++++.++|+++++. +...+.+.+.
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k--~~~~~~~~R~~m~~~ai~~~~~~~v~ 81 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGK--KDLAASHHRVAMARLALQTSDWIRVD 81 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSS--SCCCCHHHHHHHHHHHGGGCSSEEEC
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccC--CCCCCHHHHHHHHHHHhcCCCceEee
Confidence 578999999999999999999999987752 5654222221111222 257999999999884 6666666653
No 35
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.96 E-value=8.6e-10 Score=101.21 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=56.2
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhcc--CCCCCCCCHHHHHHHHHhcCCccEEEEc
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYK--GYGYPIMNLHERVLSVLACKYVDEVVIG 160 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~K--g~~~pi~s~~ER~~~v~~~k~VD~Vvi~ 160 (279)
+.+++++ |+||++|.||+.+|++|++.+|.+||+|..++..-... ...+ ..++++|+++++++ +||.|++.
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~y-p~tle~d~~lL~~~-GVD~vf~p 93 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERY-PRDFERDRKLLEKE-NVDCIFHP 93 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGS-CCCHHHHHHHHHTT-TCSEEECC
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccC-CCCHHHHHHHHHHC-CCCEEEeC
Confidence 4456666 99999999999999999999999999997666432111 1123 57899999999999 69999874
No 36
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.56 E-value=6.4e-09 Score=95.18 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=55.3
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccC-CCCCCCCHHHHHHHHHhcCCccEEEEc
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKG-YGYPIMNLHERVLSVLACKYVDEVVIG 160 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg-~~~pi~s~~ER~~~v~~~k~VD~Vvi~ 160 (279)
..|.+.|. +|.||+.+|++|++.++.+||+|..++....... ...++.++++|+++++++ +||.|+..
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~p 88 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFAP 88 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEECC
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEeC
Confidence 35778888 9999999999999999999999999986422111 123579999999999998 79999864
No 37
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.39 E-value=5.3e-08 Score=89.35 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=73.9
Q ss_pred CCeEEE--EcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccC-CCCCCCCHHHHHHHHHhcCCccEEEEcCCC
Q psy11147 87 TDRIVY--VDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKG-YGYPIMNLHERVLSVLACKYVDEVVIGAPY 163 (279)
Q Consensus 87 ~~~iV~--v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg-~~~pi~s~~ER~~~v~~~k~VD~Vvi~~p~ 163 (279)
|.++++ +.|. +|.||+.++++|++.++.+||.|..+|.--.... ....+.++++++++++++ +||.|+.. +|
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf~p-~~ 96 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVFHP-AV 96 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEECC-CH
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CH
Confidence 445655 7886 9999999999999999999999999885322111 113468999999999999 89999873 22
Q ss_pred C--ChHHHH-------------HhcCCc-------------EEEEcCCCCCCCCCCCCh
Q psy11147 164 T--ITADML-------------SQLRVD-------------IVCRGLAAVLPDETGRDP 194 (279)
Q Consensus 164 ~--~~~e~i-------------~~~~id-------------~vV~G~d~~~~~~~~~d~ 194 (279)
. .+.+|+ -.++|. .+|.|.++.||..+.++.
T Consensus 97 ~~myp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql 155 (283)
T 3ag6_A 97 EDMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQL 155 (283)
T ss_dssp HHHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHH
T ss_pred HHCCCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCH
Confidence 1 111221 226788 788999999986654443
No 38
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=98.01 E-value=1.3e-06 Score=78.19 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCCCeeeeccCCCcchhhHHHHHHh
Q psy11147 5 PPRPPLIRPWVPTRTMEVQRTAGVSTTDLVGRMLS 39 (279)
Q Consensus 5 ~~~~~~~~~~~~gr~~~vkRT~gVSTTdivgRmL~ 39 (279)
...|+|..+|++|+|++++||+|||||+||+||+.
T Consensus 177 ~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~ 211 (236)
T 3hl4_A 177 GSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVR 211 (236)
T ss_dssp SCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHH
T ss_pred CchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHH
Confidence 34689999999999999999999999999999996
No 39
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=97.62 E-value=0.00011 Score=67.76 Aligned_cols=65 Identities=18% Similarity=0.174 Sum_probs=50.6
Q ss_pred CccCCCCHHHHHHHHHHHH-cCCeEEEEEcCChhhhhccCC-CCCCCCHHHHHHHHHhcCCccEEEEc
Q psy11147 95 GAYDLFHPGHLDFLEKAKQ-AGDYLIVGIHPDHVVAWYKGY-GYPIMNLHERVLSVLACKYVDEVVIG 160 (279)
Q Consensus 95 G~FDlfH~GHi~~L~~A~~-~gd~LIVgv~~D~~v~~~Kg~-~~pi~s~~ER~~~v~~~k~VD~Vvi~ 160 (279)
.++.-+|.||+.++++|++ .++.+||.|..++.--..... .....++++++++++++ +||.|+..
T Consensus 39 pTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~p 105 (301)
T 3cov_A 39 PTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFTP 105 (301)
T ss_dssp EECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEECC
T ss_pred ecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC
Confidence 4444499999999999999 999999999998853221110 02368999999999999 89999874
No 40
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=97.57 E-value=0.00051 Score=65.67 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=60.4
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcC--CeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc-CCc---cEEEE-
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAG--DYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC-KYV---DEVVI- 159 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~g--d~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~-k~V---D~Vvi- 159 (279)
|.+.|+..|+||++|.||..+.+.|.+.. |.|++-..-.+ .|. --.+.+.|+++++.+ ... +.|++
T Consensus 191 gw~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K~---~di~~~~R~~~~~~~~~~~~p~~~v~l~ 263 (396)
T 1jhd_A 191 GWSKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LKK---GDIPAPVRDAAIRTMAEVYFPPNTVMVT 263 (396)
T ss_dssp TCSSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CCT---TCCCHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CCC---CCCCHHHHHHHHHHHHHhcCCCcceEEE
Confidence 45668889999999999999999999877 65554333222 231 357899999998864 221 33332
Q ss_pred cCCCC----ChHH-----HH-HhcCCcEEEEcCCCC
Q psy11147 160 GAPYT----ITAD-----ML-SQLRVDIVCRGLAAV 185 (279)
Q Consensus 160 ~~p~~----~~~e-----~i-~~~~id~vV~G~d~~ 185 (279)
..|+. -+.+ ++ +.++..+++.|.|..
T Consensus 264 ~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDha 299 (396)
T 1jhd_A 264 GYGFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHA 299 (396)
T ss_dssp EEECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred echHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCC
Confidence 11222 1222 12 457889999999975
No 41
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.53 E-value=0.00018 Score=65.77 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=55.4
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhc-cCCCCCCCCHHHHHHHHHhcCCccEEEE
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWY-KGYGYPIMNLHERVLSVLACKYVDEVVI 159 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~-Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi 159 (279)
+.++++ -.+...+|.||+.++++|++.+|.+||.|..++..-.. ........++++++.+++++ +||.|+.
T Consensus 21 g~~ig~-VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 21 QNRTAF-VPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp CSSCEE-EEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred CCeEEE-ECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 444444 56999999999999999999999999999988863211 11123468999999999998 8998875
No 42
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=97.52 E-value=0.0005 Score=64.69 Aligned_cols=92 Identities=12% Similarity=-0.048 Sum_probs=62.8
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc-CCc-c--EEEEc-C
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC-KYV-D--EVVIG-A 161 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~-k~V-D--~Vvi~-~ 161 (279)
|.+.|+..|+||++|.||..+.+.|.+.+|.|++-..-.+ .|. --.+.+-|+++++.+ ... + .|++. .
T Consensus 154 gw~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g~----~K~---~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~ 226 (349)
T 1v47_A 154 GWRKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILGA----KKP---DDFPTEVIVEAYQALIRDFLPQERVAFFGL 226 (349)
T ss_dssp TCCSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCSC----CCT---TSCCHHHHHHHHHHHHHHHSCGGGEEECCB
T ss_pred CCCeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCCC----CCC---CCCCHHHHHHHHHHHHhhcCCCcceEEEec
Confidence 4456778999999999999999999999997766444322 231 358999999998864 222 2 35442 2
Q ss_pred CCC----ChHH-----HH-HhcCCcEEEEcCCCC
Q psy11147 162 PYT----ITAD-----ML-SQLRVDIVCRGLAAV 185 (279)
Q Consensus 162 p~~----~~~e-----~i-~~~~id~vV~G~d~~ 185 (279)
|+. -+.+ ++ +.++..+++.|.|..
T Consensus 227 p~~m~~aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 227 ATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hHHhhcCCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 332 1222 22 357889999999875
No 43
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=97.23 E-value=0.0014 Score=60.79 Aligned_cols=69 Identities=22% Similarity=0.328 Sum_probs=52.4
Q ss_pred CCCeEEE--EcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhcc-C-CCCCCCCHHHHHHHHHhcCCccEEEE
Q psy11147 86 PTDRIVY--VDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYK-G-YGYPIMNLHERVLSVLACKYVDEVVI 159 (279)
Q Consensus 86 ~~~~iV~--v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~K-g-~~~pi~s~~ER~~~v~~~k~VD~Vvi 159 (279)
.|.++++ +-| .+|.||+.|+++|++.+|.+||.|..++.--... . ..|| -++++.++++++. +||.|+.
T Consensus 41 ~g~~IgfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YP-Rtle~D~~ll~~~-GvD~vF~ 113 (314)
T 3inn_A 41 QGKKIGFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYP-RDLERDAGLLHDA-QVDYLFA 113 (314)
T ss_dssp TTCCEEEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCC-CCHHHHHHHHHHT-TCSEEEC
T ss_pred cCCeEEEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccC-CCHHHHHHHHHhC-CCCEEEC
Confidence 3557777 567 4999999999999999999999999887521100 0 1244 6789999999888 8997764
No 44
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=97.03 E-value=0.0019 Score=59.12 Aligned_cols=67 Identities=25% Similarity=0.357 Sum_probs=49.4
Q ss_pred CCCeEEE--EcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhh----hccCCCCCCCCHHHHHHHHHhcCCccEEEE
Q psy11147 86 PTDRIVY--VDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVA----WYKGYGYPIMNLHERVLSVLACKYVDEVVI 159 (279)
Q Consensus 86 ~~~~iV~--v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~----~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi 159 (279)
.|.++++ +-|+ +|.||+.|+++|++.+|.+||+|.-++.-- ... .|| =++++=++++++. +||.|+.
T Consensus 23 ~g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~--~YP-Rtle~D~~~l~~~-gvd~vF~ 95 (287)
T 3q12_A 23 EGKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLA--HYP-RTLQEDCEKLTRH-GADLVFA 95 (287)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHH--HSC-CCHHHHHHHHHHH-TCSEEEC
T ss_pred cCCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhh--cCC-CCHHHHHHHHHHC-CCCEEEC
Confidence 3557877 6686 999999999999999999999998877411 011 144 3566666777777 8997765
No 45
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=96.33 E-value=0.014 Score=53.38 Aligned_cols=67 Identities=31% Similarity=0.348 Sum_probs=47.2
Q ss_pred CCeEEEE--cCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhhcc--CCCCCCCCHHHHHHHHHhcCCccEEEE
Q psy11147 87 TDRIVYV--DGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAWYK--GYGYPIMNLHERVLSVLACKYVDEVVI 159 (279)
Q Consensus 87 ~~~iV~v--~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~~K--g~~~pi~s~~ER~~~v~~~k~VD~Vvi 159 (279)
|.+++++ -|. +|-||+.|+++|++ +|.+||.|.-++.--... -..|| =++++=++++++. +||.|+.
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YP-Rtle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYP-RDLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSC-CCHHHHHHHHHHT-TCSEEEC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCC-CCHHHHHHHHHHC-CCCEEEC
Confidence 4466664 464 99999999999999 999999998876421100 00245 4566667777777 8997775
No 46
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=95.96 E-value=0.032 Score=50.38 Aligned_cols=70 Identities=26% Similarity=0.416 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCccCCCCHHHHHHHHHHHHcCCeEEEEEcCChhhhh----ccCCCCCCCCHHHHHHHHHhcCCccEEEE
Q psy11147 85 KPTDRIVYVDGAYDLFHPGHLDFLEKAKQAGDYLIVGIHPDHVVAW----YKGYGYPIMNLHERVLSVLACKYVDEVVI 159 (279)
Q Consensus 85 ~~~~~iV~v~G~FDlfH~GHi~~L~~A~~~gd~LIVgv~~D~~v~~----~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi 159 (279)
..|.++++++ +---+|-||+.|+++|++.+|.+||.|.-++.--. .. .|| =++++=++++++. +||.|+.
T Consensus 21 ~~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~--~YP-Rtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 21 IKQQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQ--TYP-NQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp CTTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHH--HSC-CCHHHHHHHHHHT-TCSEEEC
T ss_pred hCCCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhh--cCC-CCHHHHHHHHHHC-CCCEEEC
Confidence 3455666654 44478999999999999999999999988764110 11 144 3566666777777 8997765
No 47
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=91.29 E-value=2.4 Score=40.31 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=58.3
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHH-HcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc--CC-ccEEEEc-C
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAK-QAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC--KY-VDEVVIG-A 161 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~-~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~--k~-VD~Vvi~-~ 161 (279)
|.+.|+...+++++|.||.+++.+|. +.++.|+| + +.+-..|. -=++.+-|+++.+.+ .| -+.|++. -
T Consensus 186 gw~~VvafqtrNP~HraH~e~~~r~a~e~~~~lll--h--PlvG~tK~---~Dip~~vR~~~~~~~l~~yp~~~v~l~~~ 258 (395)
T 1r6x_A 186 QWDRVVAFQTRNPMHRAHRELTVRAAREANAKVLI--H--PVVGLTKP---GDIDHHTRVRVYQEIIKRYPNGIAFLSLL 258 (395)
T ss_dssp TCCCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--C--CBCSBCCT---TCCCHHHHHHHHHHHGGGSSTTCEEECCB
T ss_pred CCCcEEEeccCCCcchhhHHHHHHHHHHcCCcEEE--E--ECCCCCCC---CCCCHHHHHHHHHHHHHhCCCccEEEEec
Confidence 45668889999999999977766665 55664432 2 22322232 237899999998876 23 2335442 1
Q ss_pred CCC----ChHH-----HH-HhcCCcEEEEcCCCCC
Q psy11147 162 PYT----ITAD-----ML-SQLRVDIVCRGLAAVL 186 (279)
Q Consensus 162 p~~----~~~e-----~i-~~~~id~vV~G~d~~~ 186 (279)
|+. -+.| .+ +.+++..+++|-|...
T Consensus 259 p~~mryAGPrEai~HAiiRkN~GcthfIVGRDhAG 293 (395)
T 1r6x_A 259 PLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAG 293 (395)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHTTCSEEEECTTTTC
T ss_pred chhhhhcCcHHHHHHHHHHHHcCCceEEECCCCCC
Confidence 222 1222 22 4689999999998754
No 48
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=90.78 E-value=3.4 Score=40.39 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=58.8
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHH-HcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcC--C-ccEEEE-cC
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAK-QAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACK--Y-VDEVVI-GA 161 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~-~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k--~-VD~Vvi-~~ 161 (279)
|.+.|+...+++++|.||.++|.+|. +.++.|+|-.. +-..|. -=++.+-|+++.+.+. | -+.|++ .-
T Consensus 187 gw~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl----~g~~k~---~di~~~~r~~~~~~~~~~yp~~~~~l~~~ 259 (511)
T 1g8f_A 187 QWDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPV----VGLTKP---GDIDHHTRVRVYQEIIKRYPNGIAFLSLL 259 (511)
T ss_dssp TCCCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEB----CSBCST---TCCCHHHHHHHHHHHGGGSCTTSEEECCB
T ss_pred CCCcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEEC----CCCCCC---CCCCHHHHHHHHHHHHHhCCcccEEEEec
Confidence 44668889999999999977766655 55775543322 212232 2378999999988762 3 233554 12
Q ss_pred CCC----ChHH-----HH-HhcCCcEEEEcCCCCC
Q psy11147 162 PYT----ITAD-----ML-SQLRVDIVCRGLAAVL 186 (279)
Q Consensus 162 p~~----~~~e-----~i-~~~~id~vV~G~d~~~ 186 (279)
|+. -+.| .+ +.+++..++.|-|...
T Consensus 260 p~~m~yaGprea~~hai~r~n~G~th~IvGrdhAg 294 (511)
T 1g8f_A 260 PLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAG 294 (511)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTC
T ss_pred chhhhccCcHHHHHHHHHHHhCCCceEEeCCCCCC
Confidence 333 1222 22 4689999999998754
No 49
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=86.64 E-value=3.9 Score=40.06 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=60.0
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHH-cCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc--CC--ccEEEEc-
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQ-AGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC--KY--VDEVVIG- 160 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~-~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~--k~--VD~Vvi~- 160 (279)
|.+.|+..=++.++|.||..++++|.. .++.|+|-...- ..|. -=++.+-|+.+++.+ .| =+.|++.
T Consensus 162 gw~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g----~~k~---~di~~~~R~~~~~~~~~~~~p~~~v~~~~ 234 (546)
T 2gks_A 162 GLDKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVG----LTKP---GDVDVYTRMRIYKVLYEKYYDKKKTILAF 234 (546)
T ss_dssp TCSCEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCS----BCCT---TSCCHHHHHHHHHHHHHHHSCTTTEEECB
T ss_pred CCCcEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcC----CCCC---CCCCHHHHHHHHHHHHHhcCCCCcEEEee
Confidence 445688899999999999999999986 688665532221 2232 246899999998876 22 1344442
Q ss_pred CC----CCChHH-----HH-HhcCCcEEEEcCCCC
Q psy11147 161 AP----YTITAD-----ML-SQLRVDIVCRGLAAV 185 (279)
Q Consensus 161 ~p----~~~~~e-----~i-~~~~id~vV~G~d~~ 185 (279)
.| |.-+.+ .+ +.+++..+|.|-|+.
T Consensus 235 ~p~~m~~agprea~~ha~ir~n~G~th~ivgrdha 269 (546)
T 2gks_A 235 LPLAMRMAGPREALWHGIIRRNYGATHFIVGRDHA 269 (546)
T ss_dssp BCCBCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred cCchhhccCchHHHHHHHHHHhCCCCeEEECCCCC
Confidence 12 222223 22 568999999997654
No 50
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=85.57 E-value=5.8 Score=39.04 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=56.5
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHH-HcCCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc--CCc-cEEEEc-C
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAK-QAGDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC--KYV-DEVVIG-A 161 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~-~~gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~--k~V-D~Vvi~-~ 161 (279)
|.+.|+..=+-+++|.||.+++++|. +.+|.|+| ++.+-..|. -=++.+-|+++.+.+ .|. +.|++. -
T Consensus 162 gw~~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll----~pl~g~~k~---~d~~~~~r~~~~~~~~~~~p~~~~~l~~~ 234 (552)
T 3cr8_A 162 GWRRIIAWQARQPMHRAQYEFCLKSAIENEANLLL----HPQVGGDIT---EAPAYFGLVRSFLAIRDRFPAATTQLSLL 234 (552)
T ss_dssp TCCSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE----CCBCCCCTT---TCTTHHHHHHHHHHHGGGSCGGGEEECBB
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHHhcCCeEEE----EeccCCCCC---CCCCHHHHHHHHHHHHHhCCCccEEEeec
Confidence 44567777999999999999999998 77775443 233322232 247889999998876 242 234431 2
Q ss_pred CCC----ChHH-----HH-HhcCCcEEEEcCCCC
Q psy11147 162 PYT----ITAD-----ML-SQLRVDIVCRGLAAV 185 (279)
Q Consensus 162 p~~----~~~e-----~i-~~~~id~vV~G~d~~ 185 (279)
|+. -+.| .+ +.+++..+++|-|..
T Consensus 235 p~~m~~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 235 PAPPPEASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp CSCCCCSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred chhhcccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 322 2233 22 468999999998754
No 51
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=72.95 E-value=3 Score=41.21 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=58.7
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHHc-CCeEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc--CCc-cEEEEc-C
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQA-GDYLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC--KYV-DEVVIG-A 161 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~~-gd~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~--k~V-D~Vvi~-~ 161 (279)
|.+.|+..=+++++|.||..++++|... ++.|+|-.. +-..|. -=++.+-|+..++.+ .|- +.|++. .
T Consensus 189 gw~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl----~g~~k~---~di~~~~R~~~~~~~~~~~p~~~v~l~~~ 261 (573)
T 1m8p_A 189 GWSRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPV----VGLTKP---GDIDHFTRVRAYQALLPRYPNGMAVLGLL 261 (573)
T ss_dssp TCCSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CCCCCT---TCHHHHHHHHHHHHHGGGSSTTSEEECBB
T ss_pred CCCeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeC----CCCCCC---CCCCHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 4456777899999999999999988854 776655321 111221 236889999998886 232 335443 2
Q ss_pred CCC----ChHH------HHHhcCCcEEEEcCCCC
Q psy11147 162 PYT----ITAD------MLSQLRVDIVCRGLAAV 185 (279)
Q Consensus 162 p~~----~~~e------~i~~~~id~vV~G~d~~ 185 (279)
|+. -+.| +-+.+++..++.|-|+.
T Consensus 262 p~~m~~agprea~~ha~ir~n~G~th~ivgrdha 295 (573)
T 1m8p_A 262 GLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHA 295 (573)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTT
T ss_pred CchhhccCchHHHHHHHHHHHCCCCeEEECCCCC
Confidence 222 1222 22568899999997754
No 52
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=39.14 E-value=65 Score=32.16 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=59.7
Q ss_pred CCeEEEEcCccCCCCHHHHHHHHHHHH-cCC------eEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhc-C--Cc--
Q psy11147 87 TDRIVYVDGAYDLFHPGHLDFLEKAKQ-AGD------YLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLAC-K--YV-- 154 (279)
Q Consensus 87 ~~~iV~v~G~FDlfH~GHi~~L~~A~~-~gd------~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~-k--~V-- 154 (279)
|.+.|+..=+-+++|.||-.+++.|.+ .+| .|+| | +.+-..|. -=++.+-|+++.+.+ . |.
T Consensus 411 gw~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll--~--pl~G~tk~---~di~~~~r~~~~~~~~~~~y~p~ 483 (630)
T 1x6v_B 411 NADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLL--H--PLGGWTKD---DDVPLMWRMKQHAAVLEEGVLNP 483 (630)
T ss_dssp TCSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEE--E--EBCSCCCT---TSCCHHHHHHHHHHHHHTTSSCG
T ss_pred CCCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEE--E--eCcCCCCC---CCCCHHHHHHHHHHHHHcCCCCC
Confidence 456788888999999999999998875 444 2332 2 22222232 247899999888776 1 22
Q ss_pred cEEEEc-CCCC----ChHH-----HH-HhcCCcEEEEcCCCCC
Q psy11147 155 DEVVIG-APYT----ITAD-----ML-SQLRVDIVCRGLAAVL 186 (279)
Q Consensus 155 D~Vvi~-~p~~----~~~e-----~i-~~~~id~vV~G~d~~~ 186 (279)
+.|++. -|+. -+.| ++ +.+++..+|+|-|+..
T Consensus 484 ~~~~l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhAG 526 (630)
T 1x6v_B 484 ETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAG 526 (630)
T ss_dssp GGEEECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTTC
T ss_pred cceEEeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCCC
Confidence 346553 1222 1233 22 4789999999999754
No 53
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=35.64 E-value=70 Score=28.90 Aligned_cols=23 Identities=9% Similarity=0.180 Sum_probs=10.4
Q ss_pred eEEEEcCccCCCCHHHHHHHHHHHHc
Q psy11147 89 RIVYVDGAYDLFHPGHLDFLEKAKQA 114 (279)
Q Consensus 89 ~iV~v~G~FDlfH~GHi~~L~~A~~~ 114 (279)
.+||.+++. .....+++++.++.
T Consensus 201 ~lV~LD~~~---~~v~~e~V~~I~~~ 223 (286)
T 3vk5_A 201 HMVYLYSRN---EHVPPEVVRHFRKG 223 (286)
T ss_dssp SEEEEECSS---SCCCHHHHHHHHHH
T ss_pred CEEEEcCCC---CcCCHHHHHHHHHh
Confidence 445555444 33344444444443
No 54
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=22.86 E-value=43 Score=31.27 Aligned_cols=21 Identities=33% Similarity=0.428 Sum_probs=17.3
Q ss_pred CCCeEEEEcCcc--CCCCHHHHH
Q psy11147 86 PTDRIVYVDGAY--DLFHPGHLD 106 (279)
Q Consensus 86 ~~~~iV~v~G~F--DlfH~GHi~ 106 (279)
++...+|+.|-+ +.+|+||..
T Consensus 37 ~~~v~~y~~gPt~yg~~HiGHar 59 (414)
T 3c8z_A 37 GPTATMYVCGITPYDATHLGHAA 59 (414)
T ss_dssp CSEEEEEECCCCTTSCCBHHHHH
T ss_pred CCCceEEeCCCcCCCCcCccccH
Confidence 555678888877 999999986
No 55
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=21.71 E-value=1.3e+02 Score=26.12 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=35.5
Q ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHcC-C-eEEEEEcCChhhhhccCCCCCCCCHHHHHHHHHhcCCccEEEEcC
Q psy11147 88 DRIVYVDGAYDLFHPGHLDFLEKAKQAG-D-YLIVGIHPDHVVAWYKGYGYPIMNLHERVLSVLACKYVDEVVIGA 161 (279)
Q Consensus 88 ~~iV~v~G~FDlfH~GHi~~L~~A~~~g-d-~LIVgv~~D~~v~~~Kg~~~pi~s~~ER~~~v~~~k~VD~Vvi~~ 161 (279)
..+||+.+ -+- .|+.+++++.++.. + .|+||..-. +.++ +..+. .++|.|+++.
T Consensus 154 ~~~VYld~--sG~-~~~~~~i~~i~~~~~~~Pv~vGGGI~--------------t~e~-a~~~~--~gAD~VVVGS 209 (228)
T 3vzx_A 154 LPIFYLEY--SGV-LGDIEAVKKTKAVLETSTLFYGGGIK--------------DAET-AKQYA--EHADVIVVGN 209 (228)
T ss_dssp CSEEEEEC--TTS-CCCHHHHHHHHHHCSSSEEEEESSCC--------------SHHH-HHHHH--TTCSEEEECT
T ss_pred CCEEEecC--CCC-cCCHHHHHHHHHhcCCCCEEEeCCCC--------------CHHH-HHHHH--hCCCEEEECh
Confidence 57888887 332 46889999988876 4 678876632 2232 23333 3789999874
No 56
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=21.51 E-value=46 Score=29.55 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=23.3
Q ss_pred EEEcCccCC-CCHHHHHHHHHHHHcC-CeEEE
Q psy11147 91 VYVDGAYDL-FHPGHLDFLEKAKQAG-DYLIV 120 (279)
Q Consensus 91 V~v~G~FDl-fH~GHi~~L~~A~~~g-d~LIV 120 (279)
+++.|.+++ ++.|--++++.|++.| |.|||
T Consensus 100 ivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 100 IGLLMYANLVYARGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE
Confidence 444689997 5679999999999887 56665
No 57
>2l8k_A NSP7, non-structural protein 7; viral protein; NMR {Equine arteritis virus}
Probab=21.41 E-value=39 Score=26.73 Aligned_cols=28 Identities=29% Similarity=0.424 Sum_probs=17.4
Q ss_pred hhhhhcccCCCCCCCCeEEEEcCccC-CCC
Q psy11147 73 EKIRQFSEGRQPKPTDRIVYVDGAYD-LFH 101 (279)
Q Consensus 73 ~~i~~fs~~~~~~~~~~iV~v~G~FD-lfH 101 (279)
.++.+|.....+.+|+. |++.|.|| ++|
T Consensus 66 AkL~~Fa~~~~~~~GD~-VV~LG~~d~~~v 94 (123)
T 2l8k_A 66 AKLADFAVEQEVTAGDR-VVVIDGLDRMAH 94 (123)
T ss_dssp HHHTTTTCCCCCCTTSE-EEESSCCSSCEE
T ss_pred HHHHHHhhccCCCCCCE-EEEecceeEEEe
Confidence 34556664456778865 55566688 654
No 58
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=20.70 E-value=45 Score=31.76 Aligned_cols=22 Identities=36% Similarity=0.436 Sum_probs=17.7
Q ss_pred CCCCeEEEEcCcc--CCCCHHHHH
Q psy11147 85 KPTDRIVYVDGAY--DLFHPGHLD 106 (279)
Q Consensus 85 ~~~~~iV~v~G~F--DlfH~GHi~ 106 (279)
.++...+|+.|-- |.+|+||+.
T Consensus 19 ~~~~v~~yv~gPt~y~~~HiGHar 42 (461)
T 1li5_A 19 HAGEVGMYVCGITVYDLCHIGHGR 42 (461)
T ss_dssp STTEEEEEECCCBSSSCCBHHHHH
T ss_pred CCCCeeEEEcCCcCCCCCcccccH
Confidence 3455678888876 999999996
Done!