RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11155
         (101 letters)



>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 570

 Score = 44.3 bits (104), Expect = 3e-07
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 33  FFDGYNPNIAADISNVFATVALRFGHTLINPILTRLNENYTTIPEVNISWLK 84
            +  YN ++   I+NVF   A R+GHTLI P + RL+  Y  +       L 
Sbjct: 304 TYRSYNDSVDPRIANVFTN-AFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS 354


>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 511

 Score = 37.6 bits (87), Expect = 7e-05
 Identities = 5/40 (12%), Positives = 10/40 (25%)

Query: 34  FDGYNPNIAADISNVFATVALRFGHTLINPILTRLNENYT 73
              +N               L   H L+       ++ Y+
Sbjct: 292 ELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYS 331


>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
           aries) [TaxId: 9940]}
          Length = 511

 Score = 32.2 bits (73), Expect = 0.007
 Identities = 4/38 (10%), Positives = 9/38 (23%)

Query: 36  GYNPNIAADISNVFATVALRFGHTLINPILTRLNENYT 73
            +                L   H L+        ++Y+
Sbjct: 293 LFGAQFQYRNRIAMEFNQLYHWHPLMPDSFRVGPQDYS 330


>d1uspa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr
           {Deinococcus radiodurans [TaxId: 1299]}
          Length = 137

 Score = 23.5 bits (50), Expect = 5.9
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 67  RLNENYTTIPEVNISWLKWIQPVQMFLSSWVECMS 101
           RLN + +   E+         P Q+F + +  C  
Sbjct: 23  RLNLDLSVPAEMGGDGGPGTNPEQLFAAGYAACFQ 57


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.134    0.429 

Gapped
Lambda     K      H
   0.267   0.0517    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 394,501
Number of extensions: 15333
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 8
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.4 bits)