BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11159
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 87/117 (74%)
Query: 16 SRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMK 75
+RS+ T+F +QD DF+ +V N+ TPV+VDF A WC PCK L PRLE V+ +
Sbjct: 49 ARSIYTTRVCSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQH 108
Query: 76 GKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
GKVV+AKVDID+ TDLA++YEVSAVP ++AMKNG +D+ +G++D D+L++F+ L+
Sbjct: 109 GKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 88/118 (74%)
Query: 15 PSRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM 74
P+R++ T+F +QD DF+ +V N+ TPV+VDF A WC PCK L PRLE ++ +
Sbjct: 48 PARTIYTTRISLTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQ 107
Query: 75 KGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
GKVV+AKVDID+ TDLA++YEVSAVP ++AMKNG +D+ +G++D D+L++F+ L+
Sbjct: 108 HGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 88/118 (74%)
Query: 15 PSRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM 74
P+R++ T+F VQD DF+ +V N+ TPV+VDF A WC PCK L PRLE ++ +
Sbjct: 48 PARTVHTTRVCLTTFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQ 107
Query: 75 KGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
GKVV+AKVDID+ TDLA++YEVSAVP ++A+KNG +D+ +G++D D+L++F+ L+
Sbjct: 108 HGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 87/118 (73%)
Query: 15 PSRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM 74
P+R+ T+F VQD DF+ +V N+ TPV+VDF A WC PCK L PRLE ++ +
Sbjct: 48 PARTFHTTRVCSTTFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQ 107
Query: 75 KGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
GKVV+AKVDID+ TDLA++YEVSAVP ++A+KNG +D+ +G++D D+L++F+ L+
Sbjct: 108 HGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|Q17424|THIO2_CAEEL Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=3 SV=2
Length = 145
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 17 RSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKG 76
R S G++V F + + DF +KV +S PVIVDF A WC PC+ L PRLE ++ +G
Sbjct: 31 RHFSHGASV---FDIDSVEDFTEKVIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQG 87
Query: 77 KVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
V+LAK+++D +LAMDY +SAVP + A KNG+++ G+ D ++L FI++++
Sbjct: 88 SVLLAKINVDHAGELAMDYGISAVPTVFAFKNGEKISGFSGVLDDEQLDDFIEDVL 143
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 5/93 (5%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVL 103
AS V+VDFFA WC PC+ LTP LE + E+ V + K++IDE + A YEVS++P L
Sbjct: 15 ASGLVLVDFFAEWCGPCRMLTPILENLAAELP-HVTIGKINIDENSKPAETYEVSSIPTL 73
Query: 104 IAMKNGKELDRLIGLQDIDKLKSFIDNLVEKQS 136
I K+G E+ R++GL+D K F+ NL+ K +
Sbjct: 74 ILFKDGNEVARVVGLKD----KEFLTNLINKHA 102
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 63/93 (67%)
Query: 37 FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYE 96
F+K+V + PV+VDF+A WC PCK LTP ++ + E+KGKV + K++IDE ++ +Y
Sbjct: 10 FKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNIPSEYG 69
Query: 97 VSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+ ++P ++ KNG++ D IGLQ + L +I+
Sbjct: 70 IRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWIN 102
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 15 PSRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM 74
PSR G+ + K Q + F++ ++ + PV+VDF+ATWC PC+ + P L+ V +++
Sbjct: 50 PSRR---GATLRVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEKL 106
Query: 75 KGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
K+ + K+D ++ T +A Y++ A+P I KNGK R G ++L I++ +E
Sbjct: 107 GDKIQVVKIDTEKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQIESALE 165
>sp|Q8L7S9|TRXY2_ARATH Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560
PE=1 SV=1
Length = 167
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%)
Query: 15 PSRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM 74
PS S + K Q N F+ ++N+ PV+VDF+ATWC PC+ + P L V + +
Sbjct: 46 PSSSTRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETL 105
Query: 75 KGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
K + + K+D ++ LA Y++ A+P I K+GK DR G ++L I+N ++
Sbjct: 106 KDIIAVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQ 164
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 60/96 (62%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLA 92
D ++F+ V +S PV+VDF+A WC PCK + P L+ + EM G+V +AKV+IDE +LA
Sbjct: 6 DNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELA 65
Query: 93 MDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFI 128
+ V ++P L+ K+G+ ++G +L +I
Sbjct: 66 AQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWI 101
>sp|P07887|THIO2_CORNE Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3
Length = 108
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
+F+ V +A TPV+VDF+A WC PCK + P LE + +E GKV + KVD+ D A+ Y
Sbjct: 12 NFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKY 71
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDN 130
+ +P L+ K+G+ + + +G KL +FID
Sbjct: 72 NIRNIPALLMFKDGEVVAQQVGAAPRSKLAAFIDQ 106
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 37 FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYE 96
F+K+V + PV+VDF+A WC PCK LTP ++ + E++GKV + K++IDE + +Y
Sbjct: 10 FKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTPSEYG 69
Query: 97 VSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+ ++P ++ KNG++ D IGLQ + L +I+
Sbjct: 70 IRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWIN 102
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVL 103
AS V++DFFA WC PCK LTP LEA+ E+ V + KVDID A Y VS++P L
Sbjct: 15 ASGLVLIDFFAEWCGPCKMLTPVLEALAAELP-HVTILKVDIDSSPRPAEQYSVSSIPTL 73
Query: 104 IAMKNGKELDRLIGLQDIDKLKSFI 128
I K+GKE++R +GL+D D L I
Sbjct: 74 ILFKDGKEVERSVGLKDKDSLIKLI 98
>sp|P52227|THIO_CHLCV Thioredoxin OS=Chlamydophila caviae (strain GPIC) GN=trxA PE=3 SV=1
Length = 102
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVL 103
A+ V++DFFA WC PCK LTP LE++ E+ V++ KV+ID+ A Y VS++P L
Sbjct: 15 ATGLVLIDFFAEWCGPCKMLTPVLESLEAEVS-SVLIGKVNIDDHPAPAEQYGVSSIPTL 73
Query: 104 IAMKNGKELDRLIGLQDIDKLKSFIDN 130
I K+GKE+DR++GL+D D L I+
Sbjct: 74 ILFKDGKEVDRVVGLKDKDSLIRLINQ 100
>sp|Q6NPF9|TRXY1_ARATH Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760
PE=2 SV=1
Length = 172
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 4 LPRLTSINKCIPSRSLSVGSAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTL 63
P L+S +C P R K Q + FE + N+ PV+VD++ATWC PC+ +
Sbjct: 49 FPSLSSTTRCTPRR---------IEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFM 99
Query: 64 TPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIG 117
P L V + +K K+ + K+D ++ +A Y++ A+P I K+G+ DR G
Sbjct: 100 VPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFILFKDGEPCDRFEG 153
>sp|O83889|THIO_TREPA Thioredoxin OS=Treponema pallidum (strain Nichols) GN=trxA PE=3
SV=1
Length = 105
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 48 VIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMK 107
VIVDF+A WC CK L P LE V E+ VV+ K+++D+ DLA+++ V+++P LI K
Sbjct: 21 VIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFK 80
Query: 108 NGKELDRLIGLQDIDKLKSFI 128
+GKE+DR IG D K+ + I
Sbjct: 81 DGKEVDRSIGFVDKSKILTLI 101
>sp|Q6XHI1|THIO2_DROYA Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 SV=1
Length = 106
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 29 FKVQDMNDFEKKVKNASTPVIV-DFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDE 87
++++D D ++ AS ++V DFFATWC PCK ++P+L + + VV+ KVD+DE
Sbjct: 3 YQIKDKADLNGQLTKASGKLVVLDFFATWCGPCKMISPKLAELSTQYADTVVVLKVDVDE 62
Query: 88 LTDLAMDYEVSAVPVLIAMKNGKELDRLIG 117
D+AM+Y +S++P + +KNG +++ G
Sbjct: 63 CEDIAMEYNISSMPTFVFLKNGVKVEEFAG 92
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+DF +KV + TPV+VDF+A WC PC+ + P L+ + E G++ +AKV+ D+ A
Sbjct: 10 SDFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQYASQ 69
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
+ +P L+ K+G+E+ RL+G + + D ++
Sbjct: 70 LGIQGIPTLVIFKDGREVGRLVGARPEAMYREIFDKVL 107
>sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3
SV=2
Length = 105
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 62/94 (65%)
Query: 37 FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYE 96
FE++V + PV+VDF+A WC+PC+ LTP +E + +++ KV + K++IDE ++ Y
Sbjct: 10 FEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPSKYG 69
Query: 97 VSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDN 130
+ ++P ++ KNG++ D +GL + L +I+N
Sbjct: 70 IRSIPTVMLFKNGEQKDTKVGLHQKNSLIEWINN 103
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVL 103
AS V+VDFFA WC PCK LTP LEA+ E+ V + K+DID A + VS++P L
Sbjct: 15 ASGLVLVDFFAEWCGPCKMLTPVLEALAAELP-YVTILKLDIDASPRPAEQFGVSSIPTL 73
Query: 104 IAMKNGKELDRLIGLQDIDKLKSFI 128
I K+GKE++R +GL+D D L I
Sbjct: 74 ILFKDGKEVERSVGLKDKDSLVKLI 98
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|Q6GA69|THIO_STAAS Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3
SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|Q6GHU0|THIO_STAAR Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3
SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|P99122|THIO_STAAN Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1
SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|P0A0K4|THIO_STAAM Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=trxA PE=1 SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|Q5HGT9|THIO_STAAC Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|Q2YXD0|THIO_STAAB Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=trxA PE=3 SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|Q2FZD2|THIO_STAA8 Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA
PE=2 SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|Q2FHT6|THIO_STAA3 Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3
SV=1
Length = 104
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
DF+ KV++ +VDF+ATWC PCK + P LE + + +GK + K+D+DE A Y
Sbjct: 10 DFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKY 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 68 EVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLD 101
>sp|O17486|THIO_ECHGR Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2
Length = 107
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 48 VIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMK 107
++ DFFATWC PCK+L P+L+A+ E + KV+ K+D+DE D+A Y V+A+P LI K
Sbjct: 25 LVCDFFATWCGPCKSLAPKLDAMAKENE-KVIFVKLDVDECQDVAEKYRVTAMPTLIVFK 83
Query: 108 NGKELDRLIGLQD 120
NG E+ ++G +
Sbjct: 84 NGCEIGHVVGANE 96
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELT 89
KV D +DF+ K+++ +VDF+ATWC PCK + P LE + + GK + K+D+DE
Sbjct: 5 KVTD-SDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 90 DLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
A YEV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 62 STAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLD 101
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELT 89
KV D +DF+ K+++ +VDF+ATWC PCK + P LE + + GK + K+D+DE
Sbjct: 5 KVTD-SDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 90 DLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
A YEV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 62 STAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLD 101
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 29 FKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDEL 88
F+ D N F+ ++ ++ V+VDF+A+WC PC L P +E + D+ +GK ++AK+++DE
Sbjct: 5 FEATDKN-FQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDEN 63
Query: 89 TDLAMDYEVSAVPVLIAMKNGKELDRLIG 117
++A Y + ++P ++ +K GK +D+++G
Sbjct: 64 PNIAGQYGIRSIPTMLIIKGGKVVDQMVG 92
>sp|P29449|TRXH1_TOBAC Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1
Length = 126
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 25 VYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVD 84
V+ KV++ N++ KK V+VDF A+WC PC+ + P L + +M V+ KVD
Sbjct: 14 VFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMP-HVIFLKVD 72
Query: 85 IDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQ 119
+DEL ++ ++ V A+P + +K+GKE+DR++G +
Sbjct: 73 VDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAK 107
>sp|Q9V429|THIO2_DROME Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2
Length = 114
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 27 TSFKVQDMNDFEKKVKNASTPVIV-DFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDI 85
T+ D + ++ AS ++V DFFATWC PCK ++P+L + + VV+ KVD+
Sbjct: 9 TNLHFHLQADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDV 68
Query: 86 DELTDLAMDYEVSAVPVLIAMKNGKELDRLIG 117
DE D+AM+Y +S++P + +KNG +++ G
Sbjct: 69 DECEDIAMEYNISSMPTFVFLKNGVKVEEFAG 100
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 55/81 (67%)
Query: 37 FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYE 96
F V +++ PV+VDF+ATWC PCK + P LE + E + ++ +AK+D+D ++A +++
Sbjct: 359 FFADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQ 418
Query: 97 VSAVPVLIAMKNGKELDRLIG 117
V ++P +I + G+ + R++G
Sbjct: 419 VVSIPTMILFQGGQPVKRIVG 439
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELT 89
+++ ++++ + + V+VDFFATWC PCK + P +E E K+D+DE++
Sbjct: 4 QLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEK-FAEQYSDAAFYKLDVDEVS 62
Query: 90 DLAMDYEVSAVPVLIAMKNGKELDRLIG 117
D+A EVS++P LI K GKE+ R++G
Sbjct: 63 DVAQKAEVSSMPTLIFYKGGKEVTRVVG 90
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 30 KVQDMND--FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDE 87
+VQD+ND +++ V + PV+VDF+A WC PCK + P ++ + E GK+ + K++ DE
Sbjct: 75 EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE 134
Query: 88 LTDLAMDYEVSAVPVLIAMKNGKELDRLIG 117
+A Y + ++P ++ KNG+ + +IG
Sbjct: 135 APGIATQYNIRSIPTVLFFKNGERKESIIG 164
>sp|Q96419|TRXH_FAGES Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1
Length = 116
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 31 VQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTD 90
VQ+ N+ +K K++ +++DF A+WC PC+ +TP + + + V KVD+D+L D
Sbjct: 13 VQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFP-HVAFFKVDVDDLKD 71
Query: 91 LAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVEKQSAVNSP 141
+A +Y+V A+P + +K G+E++R++G + D L+ K AV++P
Sbjct: 72 VAEEYKVEAMPSFVILKEGQEVERIVGARK--------DELLHK-IAVHAP 113
>sp|P52232|THIO1_SYNY3 Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0233 PE=3 SV=1
Length = 105
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 52/83 (62%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
+F + + + PV+VDF+ATWC PC+ + P LE V ++ ++ + K+D D+ +A Y
Sbjct: 9 NFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQY 68
Query: 96 EVSAVPVLIAMKNGKELDRLIGL 118
++ ++P L+ K G+ + R+ G+
Sbjct: 69 QIQSLPTLVLFKQGQPVHRMEGV 91
>sp|Q4L5F0|THIO_STAHJ Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=trxA PE=3 SV=1
Length = 104
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELT 89
KV D N F++ +++ +VDF+ATWC PCK + P LE + + GK + K+D+DE
Sbjct: 5 KVTDSN-FDENIQSGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
Query: 90 DLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
A +EV ++P LI K+G+ +D+++G Q + L +D
Sbjct: 62 STAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLD 101
>sp|P57653|THIO_BUCAI Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=trxA PE=3 SV=1
Length = 108
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
+FE++V N+ + +VDF+A WCNPCK L P LE + E KV++ K++I+E + A Y
Sbjct: 11 NFEEQVLNSKSFFLVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKLNIEENPNTAPVY 70
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+ ++P L+ N + L +G +LK F+D
Sbjct: 71 SIRSIPTLLLFNNSEVLATKVGAVSKLELKEFLD 104
>sp|P0AA30|THIO_SHIFL Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2
Length = 109
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++ID+ A
Sbjct: 11 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 70
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
Y + +P L+ KNG+ +G +LK F+D
Sbjct: 71 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA28|THIO_SALTY Thioredoxin-1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=trxA PE=3 SV=2
Length = 109
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++ID+ A
Sbjct: 11 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 70
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
Y + +P L+ KNG+ +G +LK F+D
Sbjct: 71 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA29|THIO_SALTI Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2
Length = 109
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++ID+ A
Sbjct: 11 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 70
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
Y + +P L+ KNG+ +G +LK F+D
Sbjct: 71 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA25|THIO_ECOLI Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2
Length = 109
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++ID+ A
Sbjct: 11 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 70
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
Y + +P L+ KNG+ +G +LK F+D
Sbjct: 71 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA26|THIO_ECOL6 Thioredoxin-1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=trxA PE=3 SV=2
Length = 109
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++ID+ A
Sbjct: 11 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 70
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
Y + +P L+ KNG+ +G +LK F+D
Sbjct: 71 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA27|THIO_ECO57 Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2
Length = 109
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++ID+ A
Sbjct: 11 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 70
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
Y + +P L+ KNG+ +G +LK F+D
Sbjct: 71 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=trxA PE=3 SV=1
Length = 105
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%)
Query: 37 FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYE 96
F+ +V + PVIVDF+A WC PCK L P ++ + E++ KV + K++IDE +Y
Sbjct: 10 FKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYG 69
Query: 97 VSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
V ++P ++ KNG++ D IGLQ L +I+
Sbjct: 70 VRSIPTIMLFKNGEQKDTKIGLQQKKSLLDWIN 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,824,523
Number of Sequences: 539616
Number of extensions: 1817635
Number of successful extensions: 7178
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 6506
Number of HSP's gapped (non-prelim): 599
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)