RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11159
(141 letters)
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 80.6 bits (198), Expect = 2e-21
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 28 SFKVQDMND--FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDI 85
S K+ + D F+ V A ++VDF+A WC PCK + P L+ + DE +GK+ +AK++I
Sbjct: 1 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60
Query: 86 DELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
D+ A Y + +P L+ KNG+ +G +LK F+D +
Sbjct: 61 DQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 77.7 bits (191), Expect = 4e-20
Identities = 12/107 (11%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 29 FKVQDMNDFEKKVKNAST-PVIVDFFATWCNPCKTLTPRLEAVIDEMKG-KVVLAKVDID 86
++ + + + +K +++ + ++ E +A D++
Sbjct: 13 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLE 72
Query: 87 ELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
+ + + V P + +GK L G+ +L + + ++V+
Sbjct: 73 QSEAIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIVD 119
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 75.2 bits (184), Expect = 3e-19
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 28 SFKVQDMND--FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDI 85
S V + D FE +V A PV+V F+A+WC PC+ ++P + + ++ + K++I
Sbjct: 1 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEI 60
Query: 86 DELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
D Y+V VP L +K + LD G+ DKL SF+D +
Sbjct: 61 DPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 107
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 74.1 bits (181), Expect = 7e-19
Identities = 30/98 (30%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 36 DFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDY 95
+F++ ++ PV+VDF+A WC PC+ + P LE + KV +AK+++DE + +
Sbjct: 9 NFQQAIQG-DKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQF 67
Query: 96 EVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
+ ++P LI K G+ + +LIG Q ++L++ + ++++
Sbjct: 68 GIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 71.2 bits (174), Expect = 2e-17
Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 2/110 (1%)
Query: 29 FKVQDMNDFEKKVKNA-STPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKV-VLAKVDID 86
+ + + + A V++ + ++ E +A D++
Sbjct: 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLE 78
Query: 87 ELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVEKQS 136
+ + + V P + G L G+ +L + + LVE Q
Sbjct: 79 QSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQ 128
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 69.5 bits (169), Expect = 4e-17
Identities = 28/98 (28%), Positives = 56/98 (57%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ F+ V +S PV+VDF+A WC PC+ + P ++ + E K K+ K++ DE ++A +
Sbjct: 9 DTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASE 68
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
Y + ++P ++ K GK+ + +IG + ++ +
Sbjct: 69 YGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 71.2 bits (174), Expect = 1e-16
Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 29 FKVQDMNDFEKKVKNAS--TPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDID 86
++++ F + ++ T ++V+ + C L LE + V K+
Sbjct: 102 YELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLE-CLAAEYPMVKFCKIRAS 160
Query: 87 ELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNL 131
T + +P L+ K G+ + I + + F ++
Sbjct: 161 N-TGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADV 204
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 68.2 bits (166), Expect = 1e-16
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 31 VQDMNDFEKKVKNAST-PVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELT 89
V DF+ ++ A + +V F C PC + P ++ ++ V +VD+ +
Sbjct: 6 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVF-LEVDVHQCQ 64
Query: 90 DLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
A +SA P +N +D+ G D L+ I +E
Sbjct: 65 GTAATNNISATPTFQFFRNKVRIDQYQGA-DAVGLEEKIKQHLE 107
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 67.3 bits (163), Expect = 3e-16
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 31 VQDMND--FEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDEL 88
VQD+ND +++ V + PV+VDF+A WC PCK + P ++ + E GK+ + K++ DE
Sbjct: 1 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA 60
Query: 89 TDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
+A Y + ++P ++ KNG+ + +IG L I+ +
Sbjct: 61 PGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 104
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 66.7 bits (162), Expect = 5e-16
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 30 KVQDMNDFEKKVKNAS-TPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDEL 88
+++ F++ + A V+VDF ATWC PCK + P ++ ++ + +VD+D+
Sbjct: 4 QIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIF-LEVDVDDC 62
Query: 89 TDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
D+A + EV +P K G+++ G + +KL++ I+ LV
Sbjct: 63 QDVASECEVKCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 66.7 bits (162), Expect = 1e-15
Identities = 17/96 (17%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 36 DFEKKVKNAST-PVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
++ + + V++ F W C + L ++ +++K V+ VDI E+ D
Sbjct: 12 QVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKM 71
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDN 130
YE+ ++ K + +G + +K+ +++
Sbjct: 72 YELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMED 107
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 64.8 bits (157), Expect = 3e-15
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 22 GSAVYTSFKVQDMNDFEKKVKNAST---PVIVDFFATWCNPCKTLTPRLEAVIDEMKGKV 78
G +V + ++ ++ P++VDF ATWC PCK + P E + ++ GKV
Sbjct: 1 GGSVIV---IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKV 57
Query: 79 VLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+ KVD+D + +A ++A+P K+G + D L+G DKLK+ +
Sbjct: 58 IFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDKLKALVA 107
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 64.2 bits (155), Expect = 6e-15
Identities = 37/102 (36%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 29 FKVQDMNDFEKKVKNAS-TPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDE 87
++V+D D + ++ AS V++DFFATWC PCK ++P+L + + VV+ KVD+DE
Sbjct: 8 YQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE 67
Query: 88 LTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
D+AM+Y +S++P + +KNG +++ G + +L+ I
Sbjct: 68 CEDIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIK 108
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 62.5 bits (151), Expect = 3e-14
Identities = 18/119 (15%), Positives = 37/119 (31%), Gaps = 16/119 (13%)
Query: 26 YTSFKVQDMNDFEKKVKNAST-PVIVDFFAT-------WCNPCKTLTPRLEAVIDEMKGK 77
Y V +F + V+ + + F + WC C P + + +
Sbjct: 1 YEEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 60
Query: 78 VVLAKVDIDELTDL-------AMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
V + E + +V+AVP L+ ++L L + ++
Sbjct: 61 CVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQKLVESECL-QANLVEMLFS 118
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 62.1 bits (150), Expect = 4e-14
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 30 KVQDMND--FEKKVKNAST-PVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDID 86
KV ++N F VK A PV++D F WC PCK + P+ E + +E + L
Sbjct: 7 KVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQ 66
Query: 87 ELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
E LA + + VP +K + + G DKL I
Sbjct: 67 ENKTLAKELGIRVVPTFKILKENSVVGEVTG-AKYDKLLEAIQ 108
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 61.7 bits (149), Expect = 5e-14
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 23 SAVYTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAK 82
V V + +K K + ++VDF A+WC PCK + P + + L
Sbjct: 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKV 63
Query: 83 VDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+ V A+P I +K+GK +D+ +G D D L + +
Sbjct: 64 DVDELKAVAEEWN-VEAMPTFIFLKDGKLVDKTVGA-DKDGLPTLVA 108
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 61.8 bits (149), Expect = 6e-14
Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKG--KVVLAKVDIDE 87
V ++ + V + + V+++F+A WC CK L P+ E + + +
Sbjct: 5 TVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVD 64
Query: 88 LTDLAMDYEVSAVPVLIAMKNGKELD--RLIGLQDIDKLKSFIDNLVEKQSA 137
T + E+ P + G + G + ++ L FI + ++A
Sbjct: 65 ATANDVPDEIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYKAA 116
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 61.1 bits (147), Expect = 9e-14
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 5/104 (4%)
Query: 34 MNDFEKKVKNASTPV-IVDFFATWCNPCKTLTPRLEAV----IDEMKGKVVLAKVDIDEL 88
M++ ++ ++N V I+ F C C KGK++ V+ E
Sbjct: 3 MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 62
Query: 89 TDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
+ A Y V AVP ++ NG++ G + + +
Sbjct: 63 PEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 106
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 59.8 bits (144), Expect = 3e-13
Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+ N + PV+ F C C L+ D + V + + E +
Sbjct: 5 SSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEV--DITLPENSTWYER 62
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVEKQS 136
Y+ + + NG+ L ++ + KL+ + L S
Sbjct: 63 YKFD---IPVFHLNGQFL--MMHRVNTSKLEKQLRKLSGPSS 99
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 58.7 bits (141), Expect = 6e-13
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 31 VQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTD 90
V +F+ + + VIVDFFA WC PCK + K+V KVD+DE+++
Sbjct: 5 VTSQAEFDSIISQ-NELVIVDFFAEWCGPCKR-IAPFYEECSKTYTKMVFIKVDVDEVSE 62
Query: 91 LAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+ ++++P KNG +D L+G D LK I+
Sbjct: 63 VTEKENITSMPTFKVYKNGSSVDTLLGAND-SALKQLIE 100
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 58.3 bits (140), Expect = 1e-12
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 31 VQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTD 90
V+ N+ +K + T V+VDF A+WC PC+ + P + ++ + KVD DEL
Sbjct: 14 VETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF-LKVDTDELKS 72
Query: 91 LAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
+A D+ + A+P + +K GK LD+++G D+L+S I
Sbjct: 73 VASDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIA 110
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 58.0 bits (139), Expect = 2e-12
Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 5/107 (4%)
Query: 26 YTSFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDI 85
+V + ++ + C C+ L V+ E K + +
Sbjct: 8 IKDLEVTTVVRAQEALDK-KETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEE 66
Query: 86 DELT----DLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFI 128
Y + VP + + +G+ R ++K F
Sbjct: 67 PSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFA 113
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 57.0 bits (137), Expect = 2e-12
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 48 VIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMK 107
I F + C C ++ E K+ + K+DI + A++Y + AVP +
Sbjct: 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAING 63
Query: 108 NGKELDRLIGLQDIDKLKSFIDNLVE 133
+ +G ++L I++ +E
Sbjct: 64 VVR----FVGAPSREELFEAINDEME 85
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 57.9 bits (139), Expect = 3e-12
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKV-DIDELTDLAM 93
+ ++ V + V+V ++A WC CK L P + + D + +D +
Sbjct: 20 KNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR 79
Query: 94 DYEVSAVPVLIAMKNGKELDRLI--GLQDIDKLKSFID 129
+ P ++ GK+ + ++ G + +D L FI
Sbjct: 80 GVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIK 117
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 54.3 bits (130), Expect = 4e-11
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 12/108 (11%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTP-RLEAVIDEMKGKVVLAKVDIDEL--- 88
D FEK V+ +V F K + +++A V + +
Sbjct: 8 DELSFEKTVER-FPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGEL 66
Query: 89 --TDLAMDYE--VSAVPVLIAMKNGKELDRLI---GLQDIDKLKSFID 129
L Y+ P + K + + +D LK+F+
Sbjct: 67 ENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVS 114
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 52.9 bits (126), Expect = 1e-10
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELT 89
V + F + + F A WC PCKT+ +E + E AKVD D +
Sbjct: 12 DVYSVEQFRNIMSE-DILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKF-AKVDADNNS 69
Query: 90 DLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
++ V +P I ++GK L +IG + L+ + ++++
Sbjct: 70 EIVSKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDIIK 112
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 52.0 bits (124), Expect = 3e-10
Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWC-----NPCKTLTPRLEAVIDEMKGKVVLAKVDIDE 87
D F K + S V+V F + + K L + D + +V ++
Sbjct: 10 DTVTFYKVIPK-SKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKL 68
Query: 88 LTDLAMDYE--VSAVPVLIAMKNGKELDRLI--GLQDIDKLKSFIDN 130
+L+ Y+ + PV ++G + + G + ++ ++
Sbjct: 69 NMELSEKYKLDKESYPVFYLFRDGDFENPVPYSGAVKVGAIQRWLKG 115
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 51.8 bits (123), Expect = 4e-10
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVI---DEMKGKVVLAKVDIDELTDL 91
++F + + ++V+F+A WC CK L P ++ LAKVD E +DL
Sbjct: 15 SNFAEALAA-HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDL 73
Query: 92 AMDYEVSAVPVLIAMKNGKELDRL--IGLQDIDKLKSFIDNLV 132
A Y V P + +NG ++ D + +++
Sbjct: 74 AQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 49.8 bits (118), Expect = 3e-09
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%)
Query: 32 QDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAV--IDEMKGKVVLAKVDIDELT 89
+ + D +K+ + P++V +WC CK L P+ I E+ V+ ++ +E
Sbjct: 12 RTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEP 71
Query: 90 DLAMDYEVSAVPVLIAM--KNGKELDRLIGLQDIDKLKSFIDNL 131
I +GK +I K F +
Sbjct: 72 KDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSA 115
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 49.2 bits (116), Expect = 6e-09
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 34/130 (26%)
Query: 30 KVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDI---- 85
+V +K P ++ F++ C+ CK P++ D+ + ++ + V +
Sbjct: 20 EVTREQLIGEK------PTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSE 73
Query: 86 -----------------------DELTDLAMDYEVSAVPVLIAM-KNGKELDRLIGLQDI 121
D L +E VP K G+ G +
Sbjct: 74 DDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGM 133
Query: 122 DKLKSFIDNL 131
L+ ++ +
Sbjct: 134 KMLEKRVNRV 143
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 47.6 bits (112), Expect = 8e-09
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 45 STPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVLI 104
S I F + C C +E V +EM V + +++ E AM+Y + AVP ++
Sbjct: 2 SKVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIV 61
Query: 105 AMKNGKELDRLIGLQDIDKLKSFID 129
+ + IG + L I
Sbjct: 62 INGDVE----FIGAPTKEALVEAIK 82
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 48.5 bits (114), Expect = 1e-08
Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 21/124 (16%)
Query: 35 NDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM-------------------- 74
++ V PV+++ +ATWC + L + +
Sbjct: 10 QFYQADVLTQGKPVLLNVWATWCPTSRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLK 69
Query: 75 KGKVVLAKVDIDELTDLAMDYEVSAVPVL-IAMKNGKELDRLIGLQDIDKLKSFIDNLVE 133
+ A D L +D V P + NG R G + + I L E
Sbjct: 70 ELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 129
Query: 134 KQSA 137
K S
Sbjct: 130 KYSK 133
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 46.3 bits (109), Expect = 3e-08
Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Query: 36 DFEKKVKNASTPV-IVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMD 94
+++++ +++ C+ C + L + ++ +D + +
Sbjct: 5 SLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLN-PRIKHTAIDGGTFQNEITE 63
Query: 95 YEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
V VP + NGKE G + ++ + +D
Sbjct: 64 RNVMGVPAV--FVNGKEFG--QGRMTLTEIVAKVD 94
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein
DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli
[TaxId: 562]}
Length = 117
Score = 45.0 bits (105), Expect = 2e-07
Identities = 17/111 (15%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 30 KVQDMNDFEKKVKNAST-PVIVDFFATWCNPCKTLTPRLEAV------IDEMKGKVVLAK 82
+++ +++ + + A PV++D +A WC CK + + +
Sbjct: 6 QIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 65
Query: 83 VDIDELTDLAMDYEVSAVPVLIAM-KNGKELD--RLIGLQDIDKLKSFIDN 130
+ + L V +P ++ G+E R+ G D + + + +
Sbjct: 66 ANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 116
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 44.1 bits (103), Expect = 5e-07
Identities = 15/115 (13%), Positives = 34/115 (29%), Gaps = 30/115 (26%)
Query: 47 PVIVDFFATWCNPCKTLTPRLEAVIDE--MKGKVVLAKVDIDELTD-------------- 90
P ++ F+A+WC C + + E + ++ L +
Sbjct: 25 PTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKKDGDFQKWYAGLN 84
Query: 91 -------------LAMDYEVSAVPVLIAM-KNGKELDRLIGLQDIDKLKSFIDNL 131
+A +S P + K+G + G + + + I +
Sbjct: 85 YPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRDP 139
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 43.0 bits (100), Expect = 1e-06
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM-KGKVVLAKVDIDELTDL 91
+ F + +++ V+ +FFA WC CK + P + + + + LA++D E DL
Sbjct: 16 ATDSFNEYIQS-HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDL 74
Query: 92 AMDYEVSAVPVLIAMKNGKELDRLI--GLQDIDKLKSFID 129
M++ + P L KN + + G + + + F+
Sbjct: 75 CMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMI 114
>d1knga_ c.47.1.10 (A:) Thioredoxin-like protein CcmG (CycY, DsbE)
{Bradyrhizobium japonicum [TaxId: 375]}
Length = 144
Score = 38.6 bits (88), Expect = 5e-05
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 30/125 (24%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVV------------- 79
D F+ K +V+ +A+WC PC P L + + + ++V
Sbjct: 25 DPAAFKGK------VSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARR 78
Query: 80 ----------LAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFID 129
VD + + ++ + G + +L+G D L+S +
Sbjct: 79 FLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVV-GREGTIVYKLVGPITPDNLRSVLL 137
Query: 130 NLVEK 134
+EK
Sbjct: 138 PQMEK 142
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 36.5 bits (83), Expect = 4e-04
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 5/96 (5%)
Query: 28 SFKVQDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDE 87
E+ + ++ WC C+ L+ + LA +
Sbjct: 37 ESNGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGR 95
Query: 88 LTDLAMDYEV----SAVPVLIAMKNGKELDRLIGLQ 119
D + VL+ + L R +
Sbjct: 96 AEDDLRQRLALERIAIPLVLVLDEEFNLLGRFVERP 131
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 35.2 bits (80), Expect = 7e-04
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 47 PVIVDFFATWCNPCKTLTPRLEAVIDEMKGK--VVLAKVDIDELTDLAMDY 95
V F A+WC P + TP+L K + + DE + DY
Sbjct: 30 TVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 134
Score = 33.0 bits (74), Expect = 0.005
Identities = 17/123 (13%), Positives = 29/123 (23%), Gaps = 30/123 (24%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVD-------- 84
D + K P ++ F+ WC C P L V +
Sbjct: 18 DGASLQGK------PAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQ 71
Query: 85 -------------IDELTDLAMDYEVSAVPVLIAMK---NGKELDRLIGLQDIDKLKSFI 128
D + Y V P + + ++ D+L +
Sbjct: 72 SFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRV 131
Query: 129 DNL 131
L
Sbjct: 132 AAL 134
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 33.1 bits (74), Expect = 0.005
Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 82 KVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLVEKQ 135
+ D ++ VP ++ N + L + ++ +D+ ++ L+ +
Sbjct: 130 DSMVRRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSVKSLDEYFDLVNYLLTLK 181
Score = 26.5 bits (57), Expect = 0.90
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDELTDLAMDYEVSAVPVL 103
+S+PV+ +FF+ +C C T P + + ++ K + + A +
Sbjct: 17 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATM 76
Query: 104 IAMK 107
IA++
Sbjct: 77 IALE 80
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 31.3 bits (70), Expect = 0.020
Identities = 10/115 (8%), Positives = 30/115 (26%), Gaps = 6/115 (5%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLE-----AVIDEMKGKVVLAKVDIDE 87
++ + + ++++ C+ L + I D +E
Sbjct: 30 SFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE 89
Query: 88 LTDLAMDYEVSAVP-VLIAMKNGKELDRLIGLQDIDKLKSFIDNLVEKQSAVNSP 141
Y++ P V I + D+ + + + ++
Sbjct: 90 GQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSFLDQVTGFLGEHGQLDGL 144
>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 77
Score = 27.7 bits (62), Expect = 0.18
Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 50 VDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKV-DIDELTDLAMDYEVSAVPVLI 104
+ + T C C+ L + E+ K+ ++D++ ++ ++A+P L
Sbjct: 4 IQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQI----LEAGLTALPGLA 55
>d1r5pa_ c.47.1.15 (A:) Circadian oscillation regulator KaiB
{Cyanobacterium (Nostoc sp.) pcc 7120 [TaxId: 1180]}
Length = 90
Score = 27.7 bits (62), Expect = 0.23
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 72 DEMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIG-LQDIDKLKSFID 129
E +G L +D+ + LA + ++ A P L + ++IG L D +++ +D
Sbjct: 28 QEFQGIYALKVIDVLKNPQLAEEDKILATPTLSK-ILPPPVRKIIGDLSDRERVLIGLD 85
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 27.3 bits (60), Expect = 0.56
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKV 83
A P +++FF+ +C C L + K K+
Sbjct: 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKM 151
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator
(DsbA) {Escherichia coli [TaxId: 562]}
Length = 188
Score = 27.2 bits (59), Expect = 0.59
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 44 ASTPVIVDFFATWCNPCKTLTPRLEAVIDEMK 75
A P +++FF+ +C C L + K
Sbjct: 17 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKK 48
>d2djka1 c.47.1.2 (A:1-133) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 133
Score = 26.8 bits (59), Expect = 0.68
Identities = 12/88 (13%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 52 FFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDE----LTDLAMDYEVSAVPVLIAMK 107
FA K L+ +L+ + + +G + +D +L + + + +
Sbjct: 29 IFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVA 88
Query: 108 NGKELDRLIGLQ-DIDKLKSFIDNLVEK 134
++ + + +K+F+D+ V
Sbjct: 89 KNQKFPFDQEKEITFEAIKAFVDDFVAG 116
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 144
Score = 26.4 bits (57), Expect = 0.92
Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 8/65 (12%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKG--KVVLAKVDIDELTD 90
+ K V + F A+WC PC+ TP L ++ + + DE
Sbjct: 22 SLGSLVGK------TVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENES 75
Query: 91 LAMDY 95
DY
Sbjct: 76 DFHDY 80
>d2f8aa1 c.47.1.10 (A:12-195) Glutathione peroxidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 184
Score = 26.4 bits (57), Expect = 1.2
Identities = 3/42 (7%), Positives = 13/42 (30%), Gaps = 6/42 (14%)
Query: 33 DMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEM 74
+ KV ++++ A+ ++ + +
Sbjct: 18 SLGSLRGKV------LLIENVASLGGTTVRDYTQMNELQRRL 53
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1
(YpmQ), soluble domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 160
Score = 26.2 bits (56), Expect = 1.3
Identities = 4/37 (10%), Positives = 11/37 (29%), Gaps = 5/37 (13%)
Query: 29 FKVQDMNDFEKKVKNAS---TPVIVDFFATWCNPCKT 62
F + ++ + +++ F T C
Sbjct: 3 FSLTTHT--GERKTDKDYLGQWLLIYFGFTHCPDVCP 37
>d2axoa1 c.47.1.19 (A:38-262) Hypothetical protein Atu2684
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 225
Score = 25.8 bits (56), Expect = 1.9
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 7/39 (17%)
Query: 46 TPVIVDFFATWCNPCKTLTPRLEAVIDEMKGK---VVLA 81
V+ F + C C P + + +M K V L+
Sbjct: 6 KGVVELFTSQGCASC----PPADEALRKMIQKGDVVGLS 40
>d1j1na_ c.94.1.1 (A:) Alginate-binding periplasmic protein AlgQ2
{Sphingomonas sp. [TaxId: 28214]}
Length = 492
Score = 25.7 bits (55), Expect = 2.5
Identities = 10/56 (17%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Query: 32 QDMNDFEKKVKNASTPVIVDFFATWCNPCKTLTPRLEAVIDEMKGKVVLAKVDIDE 87
DM K V V + + + EM V+ D+D+
Sbjct: 408 IDMYVKGKYVMPGFEGVNMTREER--AIYDKYWADVRTYMYEMGQAWVMGTKDVDK 461
>d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei
[TaxId: 5691]}
Length = 415
Score = 24.8 bits (53), Expect = 4.3
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 23/70 (32%)
Query: 71 IDEM--KGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFI 128
I+E KGK VL +VD + VP +KNGK + I +
Sbjct: 5 INECDLKGKKVLIRVDFN-------------VP----VKNGKITND----YRIRSALPTL 43
Query: 129 DNLVEKQSAV 138
++ + +
Sbjct: 44 KKVLTEGGSC 53
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein
Ffh {Thermus aquaticus [TaxId: 271]}
Length = 88
Score = 23.5 bits (51), Expect = 5.8
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 62 TLTPRLEAVIDEMKGKVVLAKVDIDEL 88
L+ RL+ I ++G+ + + D+
Sbjct: 4 QLSARLQEAIGRLRGRGRITEEDLKAT 30
>d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima
[TaxId: 2336]}
Length = 398
Score = 24.3 bits (52), Expect = 6.2
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 21/66 (31%)
Query: 73 EMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
++KGK V+ +VD + VP +K+G D I I +
Sbjct: 9 DLKGKRVIMRVDFN-------------VP----VKDGVVQDD----TRIRAALPTIKYAL 47
Query: 133 EKQSAV 138
E+ + V
Sbjct: 48 EQGAKV 53
>d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus
[TaxId: 274]}
Length = 390
Score = 24.3 bits (52), Expect = 6.6
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 21/66 (31%)
Query: 73 EMKGKVVLAKVDIDELTDLAMDYEVSAVPVLIAMKNGKELDRLIGLQDIDKLKSFIDNLV 132
+ KGK VL +VD + VP +++GK D I + + +L+
Sbjct: 8 DPKGKRVLVRVDYN-------------VP----VQDGKVQDE----TRILESLPTLRHLL 46
Query: 133 EKQSAV 138
+++
Sbjct: 47 AGGASL 52
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 23.8 bits (51), Expect = 9.3
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 71 IDEMKGKVVLAKVDIDELTDLAMDYEVSAVPV--LIAMKNGKELDRLIGLQDIDKLKSFI 128
I E + L + ++ + + + +V +P L A++N + I +D + L+
Sbjct: 87 IVESLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQ 146
Query: 129 D 129
D
Sbjct: 147 D 147
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.382
Gapped
Lambda K H
0.267 0.0496 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 507,938
Number of extensions: 22784
Number of successful extensions: 129
Number of sequences better than 10.0: 1
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 70
Length of query: 141
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 64
Effective length of database: 1,350,386
Effective search space: 86424704
Effective search space used: 86424704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.8 bits)