Query psy11160
Match_columns 598
No_of_seqs 481 out of 3881
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 19:33:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11160.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11160hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtf_A UDP-glucose 6-dehydroge 100.0 7E-83 2.4E-87 689.7 44.8 406 5-526 21-443 (444)
2 4a7p_A UDP-glucose dehydrogena 100.0 5.9E-78 2E-82 655.9 45.4 419 6-527 9-443 (446)
3 3ojo_A CAP5O; rossmann fold, c 100.0 1.9E-76 6.4E-81 640.2 40.5 402 5-527 11-425 (431)
4 3g79_A NDP-N-acetyl-D-galactos 100.0 3.2E-76 1.1E-80 646.0 41.9 420 4-529 17-473 (478)
5 3gg2_A Sugar dehydrogenase, UD 100.0 3.3E-74 1.1E-78 628.8 47.6 421 6-527 3-438 (450)
6 2o3j_A UDP-glucose 6-dehydroge 100.0 5.1E-72 1.7E-76 616.9 49.5 443 5-527 9-468 (481)
7 2q3e_A UDP-glucose 6-dehydroge 100.0 2E-70 6.7E-75 602.6 50.3 443 2-526 2-465 (467)
8 2y0c_A BCEC, UDP-glucose dehyd 100.0 1.9E-69 6.4E-74 595.4 49.7 435 5-527 8-460 (478)
9 3pid_A UDP-glucose 6-dehydroge 100.0 1.4E-66 4.9E-71 562.2 37.8 378 5-512 36-424 (432)
10 1mv8_A GMD, GDP-mannose 6-dehy 100.0 1.3E-63 4.4E-68 544.0 43.6 415 6-526 1-436 (436)
11 1dlj_A UDP-glucose dehydrogena 100.0 5E-59 1.7E-63 502.7 39.1 385 6-511 1-401 (402)
12 3obb_A Probable 3-hydroxyisobu 100.0 6.8E-30 2.3E-34 264.9 24.9 242 5-375 3-263 (300)
13 4gbj_A 6-phosphogluconate dehy 100.0 1.6E-29 5.4E-34 261.8 24.1 253 6-387 6-271 (297)
14 3qha_A Putative oxidoreductase 100.0 2.9E-29 9.8E-34 259.6 24.6 255 4-388 14-286 (296)
15 4dll_A 2-hydroxy-3-oxopropiona 100.0 1.2E-28 3.9E-33 257.8 26.3 254 5-388 31-296 (320)
16 3doj_A AT3G25530, dehydrogenas 100.0 1.5E-28 5E-33 255.9 23.8 255 4-387 20-287 (310)
17 3pef_A 6-phosphogluconate dehy 100.0 1.3E-27 4.6E-32 245.5 24.1 253 6-387 2-267 (287)
18 3g0o_A 3-hydroxyisobutyrate de 100.0 1.3E-27 4.6E-32 247.6 23.6 256 4-387 6-275 (303)
19 3ojo_A CAP5O; rossmann fold, c 100.0 2.2E-29 7.6E-34 272.2 8.9 260 183-595 101-362 (431)
20 3pdu_A 3-hydroxyisobutyrate de 100.0 2.1E-27 7.2E-32 244.1 20.5 253 6-387 2-267 (287)
21 2h78_A Hibadh, 3-hydroxyisobut 99.9 2.1E-26 7.1E-31 238.1 26.1 255 4-387 2-276 (302)
22 4a7p_A UDP-glucose dehydrogena 99.9 8.3E-28 2.8E-32 261.5 7.9 269 182-595 100-368 (446)
23 4ezb_A Uncharacterized conserv 99.9 8.6E-26 2.9E-30 235.9 21.4 242 4-384 23-283 (317)
24 3g79_A NDP-N-acetyl-D-galactos 99.9 2.6E-27 8.7E-32 259.3 7.1 271 185-593 121-397 (478)
25 3qsg_A NAD-binding phosphogluc 99.9 4.4E-25 1.5E-29 229.9 23.5 237 4-375 23-271 (312)
26 3gg2_A Sugar dehydrogenase, UD 99.9 2.1E-26 7.1E-31 251.4 4.6 273 181-595 92-364 (450)
27 3pid_A UDP-glucose 6-dehydroge 99.9 7.3E-26 2.5E-30 244.5 8.2 252 183-594 126-377 (432)
28 3l6d_A Putative oxidoreductase 99.9 1E-23 3.6E-28 218.9 22.1 237 5-375 9-262 (306)
29 4e21_A 6-phosphogluconate dehy 99.9 4.8E-23 1.7E-27 218.4 23.9 242 4-375 21-319 (358)
30 1vpd_A Tartronate semialdehyde 99.9 5E-22 1.7E-26 204.5 25.7 254 6-388 6-272 (299)
31 2o3j_A UDP-glucose 6-dehydroge 99.9 6.6E-24 2.3E-28 233.6 10.4 272 181-593 105-379 (481)
32 1dlj_A UDP-glucose dehydrogena 99.9 1.4E-23 4.9E-28 225.9 10.2 260 182-594 89-354 (402)
33 3cky_A 2-hydroxymethyl glutara 99.9 5.9E-21 2E-25 196.7 26.9 256 3-387 2-271 (301)
34 2y0c_A BCEC, UDP-glucose dehyd 99.9 3.8E-24 1.3E-28 235.2 3.1 272 180-595 97-374 (478)
35 2q3e_A UDP-glucose 6-dehydroge 99.9 2.4E-23 8.1E-28 228.4 8.6 270 182-594 102-374 (467)
36 1yb4_A Tartronic semialdehyde 99.9 9.9E-22 3.4E-26 201.7 19.7 253 5-387 3-268 (295)
37 2gf2_A Hibadh, 3-hydroxyisobut 99.9 3.8E-21 1.3E-25 197.6 23.9 254 6-388 1-274 (296)
38 4gwg_A 6-phosphogluconate dehy 99.9 1.4E-21 4.7E-26 214.2 20.7 209 4-337 3-222 (484)
39 2uyy_A N-PAC protein; long-cha 99.9 1.3E-20 4.6E-25 195.7 23.2 256 3-387 28-296 (316)
40 3vtf_A UDP-glucose 6-dehydroge 99.9 9.1E-24 3.1E-28 228.3 -1.1 215 247-595 165-379 (444)
41 2cvz_A Dehydrogenase, 3-hydrox 99.8 8.3E-20 2.8E-24 186.6 20.5 250 6-387 2-262 (289)
42 1mv8_A GMD, GDP-mannose 6-dehy 99.8 1.6E-21 5.4E-26 212.2 4.7 261 181-592 90-356 (436)
43 2p4q_A 6-phosphogluconate dehy 99.8 3.9E-19 1.3E-23 196.1 21.2 246 5-375 10-283 (497)
44 3k96_A Glycerol-3-phosphate de 99.8 4.7E-19 1.6E-23 187.7 19.1 218 4-335 28-264 (356)
45 2zyd_A 6-phosphogluconate dehy 99.8 2.8E-18 9.7E-23 188.5 21.7 208 5-337 15-232 (480)
46 2pgd_A 6-phosphogluconate dehy 99.8 1.4E-17 4.9E-22 183.2 25.2 245 6-375 3-276 (482)
47 1i36_A Conserved hypothetical 99.8 1.2E-17 4.2E-22 168.7 21.3 237 6-387 1-248 (264)
48 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.7 4E-17 1.4E-21 179.4 21.5 247 6-375 2-278 (478)
49 2iz1_A 6-phosphogluconate dehy 99.7 4.3E-17 1.5E-21 179.0 21.3 246 5-375 5-280 (474)
50 1txg_A Glycerol-3-phosphate de 99.7 5E-16 1.7E-20 161.9 19.3 253 6-375 1-307 (335)
51 3dtt_A NADP oxidoreductase; st 99.7 8.9E-17 3.1E-21 161.3 12.7 201 5-313 19-233 (245)
52 1evy_A Glycerol-3-phosphate de 99.7 1.2E-16 4E-21 169.4 14.0 256 6-375 16-318 (366)
53 2ew2_A 2-dehydropantoate 2-red 99.7 2.7E-15 9.3E-20 154.4 20.2 269 5-386 3-307 (316)
54 1yj8_A Glycerol-3-phosphate de 99.7 7.5E-16 2.6E-20 164.0 16.3 256 5-374 21-338 (375)
55 1z82_A Glycerol-3-phosphate de 99.7 1.4E-15 4.8E-20 159.4 16.7 247 5-375 14-299 (335)
56 1x0v_A GPD-C, GPDH-C, glycerol 99.6 1.1E-15 3.8E-20 160.9 15.3 256 5-374 8-320 (354)
57 2dpo_A L-gulonate 3-dehydrogen 99.6 6.4E-15 2.2E-19 153.7 20.3 212 5-340 6-228 (319)
58 1zej_A HBD-9, 3-hydroxyacyl-CO 99.6 1.4E-13 4.7E-18 141.8 21.7 194 5-339 12-207 (293)
59 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 1.5E-13 5.1E-18 141.8 22.1 211 3-338 13-238 (302)
60 3mog_A Probable 3-hydroxybutyr 99.6 3.3E-14 1.1E-18 156.1 17.7 213 4-338 4-222 (483)
61 1bg6_A N-(1-D-carboxylethyl)-L 99.6 2E-14 7E-19 150.9 14.5 308 1-412 1-355 (359)
62 3d1l_A Putative NADP oxidoredu 99.6 1E-13 3.5E-18 140.1 18.4 233 5-373 10-246 (266)
63 2qyt_A 2-dehydropantoate 2-red 99.5 1.1E-13 3.6E-18 143.0 17.3 263 1-375 4-300 (317)
64 3k6j_A Protein F01G10.3, confi 99.5 5.6E-13 1.9E-17 144.9 23.0 205 4-337 53-267 (460)
65 3c24_A Putative oxidoreductase 99.5 1.3E-13 4.3E-18 141.2 15.5 204 5-339 11-231 (286)
66 2g5c_A Prephenate dehydrogenas 99.5 1.4E-12 4.7E-17 132.8 22.3 195 6-320 2-200 (281)
67 4e12_A Diketoreductase; oxidor 99.5 2.2E-12 7.5E-17 132.0 22.9 212 1-338 1-224 (283)
68 3ggo_A Prephenate dehydrogenas 99.5 5.4E-12 1.8E-16 131.3 23.1 194 5-318 33-230 (314)
69 1ks9_A KPA reductase;, 2-dehyd 99.5 3.3E-13 1.1E-17 137.3 13.5 248 6-375 1-274 (291)
70 1wdk_A Fatty oxidation complex 99.4 1.5E-12 5.1E-17 149.5 19.4 206 4-336 313-528 (715)
71 3gt0_A Pyrroline-5-carboxylate 99.4 9.4E-12 3.2E-16 124.6 21.5 97 5-161 2-103 (247)
72 2izz_A Pyrroline-5-carboxylate 99.4 5.6E-12 1.9E-16 131.4 19.3 96 4-160 21-123 (322)
73 2wtb_A MFP2, fatty acid multif 99.4 7.9E-12 2.7E-16 143.7 21.1 210 4-336 311-526 (725)
74 1zcj_A Peroxisomal bifunctiona 99.4 1.2E-11 4.2E-16 135.2 20.0 207 5-337 37-250 (463)
75 2ahr_A Putative pyrroline carb 99.4 1.2E-11 4.2E-16 124.3 17.9 194 5-339 3-200 (259)
76 2f1k_A Prephenate dehydrogenas 99.4 4E-11 1.4E-15 121.7 20.8 101 6-166 1-101 (279)
77 1jay_A Coenzyme F420H2:NADP+ o 99.3 1.9E-11 6.3E-16 119.0 14.7 186 6-312 1-200 (212)
78 3b1f_A Putative prephenate deh 99.3 8.7E-11 3E-15 120.0 20.2 107 5-168 6-113 (290)
79 3ghy_A Ketopantoate reductase 99.3 5E-11 1.7E-15 124.8 17.4 102 5-156 3-104 (335)
80 2pv7_A T-protein [includes: ch 99.3 3.3E-11 1.1E-15 124.2 15.6 183 5-336 21-205 (298)
81 2rcy_A Pyrroline carboxylate r 99.3 7.3E-11 2.5E-15 118.6 17.5 189 5-338 4-200 (262)
82 1yqg_A Pyrroline-5-carboxylate 99.3 6E-11 2.1E-15 119.2 15.0 91 6-160 1-93 (263)
83 3tri_A Pyrroline-5-carboxylate 99.2 3.3E-10 1.1E-14 115.8 20.3 96 5-160 3-103 (280)
84 3hwr_A 2-dehydropantoate 2-red 99.2 7.1E-10 2.4E-14 115.3 21.9 102 4-155 18-119 (318)
85 3ktd_A Prephenate dehydrogenas 99.2 2.6E-10 8.9E-15 119.8 15.8 101 5-167 8-112 (341)
86 2raf_A Putative dinucleotide-b 99.2 1.6E-10 5.3E-15 113.1 12.3 73 5-157 19-91 (209)
87 3ado_A Lambda-crystallin; L-gu 99.1 3.6E-09 1.2E-13 109.9 22.0 209 5-340 6-228 (319)
88 4huj_A Uncharacterized protein 99.1 1.3E-10 4.3E-15 114.5 9.8 93 4-158 22-115 (220)
89 3i83_A 2-dehydropantoate 2-red 99.1 2.1E-09 7.1E-14 111.7 17.9 99 5-154 2-103 (320)
90 1pzg_A LDH, lactate dehydrogen 99.0 1.3E-09 4.5E-14 114.0 14.1 131 1-168 5-143 (331)
91 2i76_A Hypothetical protein; N 99.0 3.4E-10 1.2E-14 115.2 8.2 91 5-160 2-93 (276)
92 2vns_A Metalloreductase steap3 99.0 1.9E-09 6.5E-14 105.7 12.5 93 5-161 28-120 (215)
93 1guz_A Malate dehydrogenase; o 99.0 2.6E-09 8.8E-14 110.7 13.5 124 6-168 1-129 (310)
94 3hn2_A 2-dehydropantoate 2-red 99.0 7.9E-08 2.7E-12 99.4 24.6 97 6-154 3-101 (312)
95 1t2d_A LDH-P, L-lactate dehydr 99.0 4.2E-09 1.4E-13 109.8 13.4 128 3-168 2-137 (322)
96 1np3_A Ketol-acid reductoisome 98.9 9.2E-09 3.1E-13 107.9 15.0 92 5-158 16-109 (338)
97 4fgw_A Glycerol-3-phosphate de 98.9 1.5E-09 5.2E-14 115.6 7.9 105 5-157 34-152 (391)
98 1y6j_A L-lactate dehydrogenase 98.9 4.8E-09 1.6E-13 109.2 11.4 125 1-168 3-134 (318)
99 2hjr_A Malate dehydrogenase; m 98.9 1.5E-08 5.1E-13 105.9 14.3 124 6-167 15-141 (328)
100 1ur5_A Malate dehydrogenase; o 98.8 1.2E-08 4.3E-13 105.6 12.4 125 6-168 3-130 (309)
101 2ewd_A Lactate dehydrogenase,; 98.8 2.7E-08 9.3E-13 103.2 13.6 123 2-162 1-126 (317)
102 3pqe_A L-LDH, L-lactate dehydr 98.8 7E-09 2.4E-13 108.2 8.8 125 1-167 1-132 (326)
103 2yjz_A Metalloreductase steap4 98.3 4.9E-10 1.7E-14 109.0 0.0 91 5-160 19-109 (201)
104 3zwc_A Peroxisomal bifunctiona 98.8 1.1E-07 3.8E-12 109.2 18.4 206 4-337 315-529 (742)
105 3g17_A Similar to 2-dehydropan 98.8 6.1E-08 2.1E-12 99.4 14.5 92 5-154 2-94 (294)
106 3c7a_A Octopine dehydrogenase; 98.8 9.1E-09 3.1E-13 110.1 8.5 106 5-155 2-115 (404)
107 1hyh_A L-hicdh, L-2-hydroxyiso 98.8 4.1E-08 1.4E-12 101.5 13.0 124 6-168 2-133 (309)
108 2gcg_A Glyoxylate reductase/hy 98.7 3.5E-08 1.2E-12 103.2 11.8 104 5-168 155-258 (330)
109 3dfu_A Uncharacterized protein 98.7 1.3E-07 4.6E-12 93.7 15.1 76 1-158 2-77 (232)
110 3tl2_A Malate dehydrogenase; c 98.7 3.9E-08 1.3E-12 102.1 11.7 129 1-167 4-137 (315)
111 2dbq_A Glyoxylate reductase; D 98.7 2.3E-08 7.8E-13 104.7 9.9 103 5-168 150-252 (334)
112 2v6b_A L-LDH, L-lactate dehydr 98.7 6.8E-08 2.3E-12 99.8 11.8 118 6-165 1-124 (304)
113 1oju_A MDH, malate dehydrogena 98.7 8.9E-08 3E-12 98.5 12.5 121 6-167 1-128 (294)
114 3d0o_A L-LDH 1, L-lactate dehy 98.7 8.6E-08 2.9E-12 99.6 12.3 126 5-168 6-134 (317)
115 1a5z_A L-lactate dehydrogenase 98.7 8.4E-08 2.9E-12 99.7 12.2 119 6-167 1-126 (319)
116 1lld_A L-lactate dehydrogenase 98.7 1.1E-07 3.6E-12 98.4 12.5 123 4-168 6-135 (319)
117 3gvi_A Malate dehydrogenase; N 98.7 7.5E-08 2.6E-12 100.3 10.8 124 5-166 7-133 (324)
118 3ldh_A Lactate dehydrogenase; 98.6 1.3E-07 4.6E-12 98.5 12.1 126 4-167 20-148 (330)
119 3fi9_A Malate dehydrogenase; s 98.6 1.6E-07 5.6E-12 98.4 11.5 120 5-167 8-136 (343)
120 1u8x_X Maltose-6'-phosphate gl 98.5 8.5E-07 2.9E-11 96.8 15.7 86 5-120 28-115 (472)
121 3p7m_A Malate dehydrogenase; p 98.5 4E-07 1.4E-11 94.8 12.2 125 5-167 5-132 (321)
122 2w2k_A D-mandelate dehydrogena 98.5 8.6E-08 2.9E-12 100.9 7.2 106 5-169 163-269 (348)
123 1ez4_A Lactate dehydrogenase; 98.5 4.8E-07 1.7E-11 94.0 12.5 124 2-168 2-132 (318)
124 1smk_A Malate dehydrogenase, g 98.5 4.7E-07 1.6E-11 94.4 12.4 116 4-163 7-131 (326)
125 1lss_A TRK system potassium up 98.5 5.5E-07 1.9E-11 80.5 11.3 42 5-73 4-45 (140)
126 1mld_A Malate dehydrogenase; o 98.5 1.5E-06 5.1E-11 90.1 14.2 112 6-165 1-125 (314)
127 3gvx_A Glycerate dehydrogenase 98.4 1.4E-07 4.9E-12 96.7 5.9 102 5-170 122-223 (290)
128 3ba1_A HPPR, hydroxyphenylpyru 98.4 1.5E-07 5.3E-12 98.3 6.2 102 5-170 164-265 (333)
129 1b8p_A Protein (malate dehydro 98.4 1.2E-06 4E-11 91.5 12.7 127 1-168 1-144 (329)
130 1ldn_A L-lactate dehydrogenase 98.4 1.7E-06 6E-11 89.7 13.5 129 4-168 5-134 (316)
131 2zqz_A L-LDH, L-lactate dehydr 98.4 8.6E-07 2.9E-11 92.4 10.7 122 4-168 8-136 (326)
132 3fr7_A Putative ketol-acid red 98.4 4.7E-06 1.6E-10 90.3 16.6 98 6-161 55-160 (525)
133 3fef_A Putative glucosidase LP 98.4 2.1E-06 7.1E-11 93.1 13.9 158 1-225 1-183 (450)
134 3gg9_A D-3-phosphoglycerate de 98.4 5.1E-07 1.8E-11 95.1 8.9 105 5-169 160-264 (352)
135 4aj2_A L-lactate dehydrogenase 98.4 1E-06 3.5E-11 92.0 11.0 122 4-167 18-146 (331)
136 2d0i_A Dehydrogenase; structur 98.4 3.4E-07 1.2E-11 95.8 7.4 103 5-169 146-248 (333)
137 1s6y_A 6-phospho-beta-glucosid 98.4 1.8E-06 6.1E-11 93.8 13.3 131 1-163 3-158 (450)
138 1obb_A Maltase, alpha-glucosid 98.4 4.9E-06 1.7E-10 90.9 16.7 129 5-166 3-161 (480)
139 3vku_A L-LDH, L-lactate dehydr 98.4 6.8E-07 2.3E-11 93.1 9.4 120 5-167 9-135 (326)
140 2ekl_A D-3-phosphoglycerate de 98.4 5.4E-07 1.8E-11 93.4 8.2 103 5-168 142-244 (313)
141 2d4a_B Malate dehydrogenase; a 98.4 1.7E-06 5.7E-11 89.6 11.8 124 7-168 1-127 (308)
142 4dgs_A Dehydrogenase; structur 98.4 7.7E-07 2.6E-11 93.2 9.1 99 5-168 171-270 (340)
143 1gdh_A D-glycerate dehydrogena 98.4 5.6E-07 1.9E-11 93.6 8.0 104 5-168 146-250 (320)
144 3jtm_A Formate dehydrogenase, 98.3 5.8E-07 2E-11 94.6 7.9 106 5-169 164-269 (351)
145 3nep_X Malate dehydrogenase; h 98.3 7.2E-07 2.5E-11 92.5 7.8 124 6-167 1-128 (314)
146 1mx3_A CTBP1, C-terminal bindi 98.3 5.1E-07 1.8E-11 94.9 6.7 105 5-169 168-272 (347)
147 2xxj_A L-LDH, L-lactate dehydr 98.3 2.8E-06 9.5E-11 87.9 11.9 123 6-168 1-127 (310)
148 2pi1_A D-lactate dehydrogenase 98.3 1.3E-06 4.3E-11 91.5 9.4 102 5-168 141-242 (334)
149 3evt_A Phosphoglycerate dehydr 98.3 3.7E-07 1.3E-11 95.1 5.0 105 5-170 137-241 (324)
150 1wwk_A Phosphoglycerate dehydr 98.3 1.3E-06 4.6E-11 90.2 9.0 103 5-168 142-244 (307)
151 4g2n_A D-isomer specific 2-hyd 98.3 9.6E-07 3.3E-11 92.7 7.7 102 6-168 174-275 (345)
152 2g76_A 3-PGDH, D-3-phosphoglyc 98.3 1.2E-06 4.2E-11 91.6 8.5 103 5-168 165-267 (335)
153 2i99_A MU-crystallin homolog; 98.3 9E-07 3.1E-11 91.6 7.2 97 5-162 135-232 (312)
154 2x0j_A Malate dehydrogenase; o 98.3 2.6E-06 8.8E-11 87.5 10.5 126 6-167 1-128 (294)
155 1ygy_A PGDH, D-3-phosphoglycer 98.2 9.9E-07 3.4E-11 97.9 7.0 102 5-168 142-244 (529)
156 2j6i_A Formate dehydrogenase; 98.2 1.1E-06 3.8E-11 92.9 6.8 105 5-168 164-269 (364)
157 2nac_A NAD-dependent formate d 98.2 1E-06 3.5E-11 94.0 6.5 105 5-168 191-295 (393)
158 4e5n_A Thermostable phosphite 98.2 1.1E-06 3.7E-11 91.8 6.5 104 5-168 145-248 (330)
159 3pp8_A Glyoxylate/hydroxypyruv 98.2 3.1E-07 1.1E-11 95.3 2.2 104 5-169 139-242 (315)
160 4hy3_A Phosphoglycerate oxidor 98.2 3E-06 1E-10 89.6 9.7 105 5-170 176-280 (365)
161 3hg7_A D-isomer specific 2-hyd 98.2 4.4E-07 1.5E-11 94.5 2.8 105 5-170 140-244 (324)
162 2yq5_A D-isomer specific 2-hyd 98.2 2.2E-06 7.6E-11 89.8 7.9 103 5-170 148-250 (343)
163 1qp8_A Formate dehydrogenase; 98.2 8E-07 2.7E-11 91.7 4.1 100 5-169 124-223 (303)
164 1j4a_A D-LDH, D-lactate dehydr 98.2 2.2E-06 7.6E-11 89.6 7.1 101 6-168 147-247 (333)
165 2i6t_A Ubiquitin-conjugating e 98.2 3.2E-06 1.1E-10 87.2 8.2 115 5-163 14-131 (303)
166 3ic5_A Putative saccharopine d 98.1 4.6E-06 1.6E-10 72.1 7.9 74 4-116 4-78 (118)
167 1sc6_A PGDH, D-3-phosphoglycer 98.1 1.7E-06 5.7E-11 92.8 6.1 101 5-168 145-245 (404)
168 3k5p_A D-3-phosphoglycerate de 98.1 2.3E-06 7.8E-11 91.8 6.7 100 6-168 157-256 (416)
169 3ego_A Probable 2-dehydropanto 98.1 2.6E-06 9E-11 87.8 7.0 93 5-150 2-94 (307)
170 3llv_A Exopolyphosphatase-rela 98.1 1.7E-05 5.7E-10 71.5 11.5 42 5-73 6-47 (141)
171 2g1u_A Hypothetical protein TM 98.1 1.1E-05 3.8E-10 74.2 10.4 41 5-72 19-59 (155)
172 3euw_A MYO-inositol dehydrogen 98.1 1.6E-05 5.5E-10 82.9 12.8 73 3-119 2-77 (344)
173 3fwz_A Inner membrane protein 98.1 2.6E-05 8.7E-10 70.6 12.2 73 5-118 7-82 (140)
174 3oj0_A Glutr, glutamyl-tRNA re 98.1 2.9E-06 9.9E-11 77.2 5.9 71 5-118 21-91 (144)
175 1dxy_A D-2-hydroxyisocaproate 98.1 2.8E-06 9.7E-11 88.8 5.9 100 6-168 146-245 (333)
176 3oet_A Erythronate-4-phosphate 98.1 4.3E-06 1.5E-10 88.7 7.1 102 5-170 119-224 (381)
177 2hk9_A Shikimate dehydrogenase 98.0 4.9E-06 1.7E-10 84.4 7.0 94 5-157 129-222 (275)
178 2dc1_A L-aspartate dehydrogena 98.0 7.5E-06 2.6E-10 81.0 8.0 85 6-162 1-87 (236)
179 3q2i_A Dehydrogenase; rossmann 98.0 1.2E-05 4.3E-10 84.1 10.0 73 4-119 12-87 (354)
180 3c85_A Putative glutathione-re 98.0 2.4E-05 8.2E-10 73.8 10.8 42 5-73 39-81 (183)
181 2o4c_A Erythronate-4-phosphate 98.0 6.9E-06 2.4E-10 87.2 7.8 104 5-168 116-219 (380)
182 1xdw_A NAD+-dependent (R)-2-hy 98.0 6.7E-06 2.3E-10 85.8 7.6 101 5-168 146-246 (331)
183 3db2_A Putative NADPH-dependen 98.0 1.3E-05 4.5E-10 83.9 9.8 72 4-119 4-78 (354)
184 2cuk_A Glycerate dehydrogenase 98.0 3.4E-06 1.2E-10 87.3 4.8 98 5-168 144-241 (311)
185 3e9m_A Oxidoreductase, GFO/IDH 98.0 8E-06 2.7E-10 84.9 7.7 75 1-119 1-79 (330)
186 1o6z_A MDH, malate dehydrogena 98.0 2.8E-05 9.6E-10 80.1 11.7 124 6-168 1-130 (303)
187 3uuw_A Putative oxidoreductase 98.0 1.2E-05 4.2E-10 82.4 8.4 102 5-168 6-111 (308)
188 4hkt_A Inositol 2-dehydrogenas 98.0 2.9E-05 1E-09 80.4 11.2 70 5-119 3-75 (331)
189 3e18_A Oxidoreductase; dehydro 98.0 2.7E-05 9.3E-10 81.9 10.8 74 1-119 1-77 (359)
190 2rir_A Dipicolinate synthase, 98.0 3.7E-05 1.3E-09 78.9 11.5 96 5-162 157-252 (300)
191 3l4b_C TRKA K+ channel protien 97.9 0.0001 3.5E-09 71.5 14.1 128 6-204 1-134 (218)
192 3d4o_A Dipicolinate synthase s 97.9 4.7E-05 1.6E-09 77.8 12.0 96 5-162 155-250 (293)
193 3hhp_A Malate dehydrogenase; M 97.9 4E-05 1.4E-09 79.2 11.1 120 6-166 1-127 (312)
194 2hmt_A YUAA protein; RCK, KTN, 97.9 4.9E-05 1.7E-09 67.8 10.2 42 5-73 6-47 (144)
195 1y81_A Conserved hypothetical 97.9 1.6E-05 5.5E-10 72.4 7.0 87 5-158 14-104 (138)
196 3mz0_A Inositol 2-dehydrogenas 97.9 4.4E-05 1.5E-09 79.6 11.1 74 5-119 2-78 (344)
197 3ezy_A Dehydrogenase; structur 97.9 3.2E-05 1.1E-09 80.6 9.9 103 5-168 2-109 (344)
198 2ho3_A Oxidoreductase, GFO/IDH 97.9 7.9E-05 2.7E-09 76.9 12.2 70 6-118 2-73 (325)
199 3cea_A MYO-inositol 2-dehydrog 97.9 7.2E-05 2.5E-09 77.7 11.9 72 4-118 7-82 (346)
200 1x7d_A Ornithine cyclodeaminas 97.8 4.4E-05 1.5E-09 80.3 9.9 104 5-162 129-232 (350)
201 4h7p_A Malate dehydrogenase; s 97.8 7E-05 2.4E-09 78.4 11.0 127 6-166 25-159 (345)
202 2d5c_A AROE, shikimate 5-dehyd 97.8 1.5E-05 5.1E-10 80.2 5.5 95 7-162 118-212 (263)
203 1tlt_A Putative oxidoreductase 97.8 2.8E-05 9.5E-10 80.2 7.5 74 1-118 1-76 (319)
204 3c1a_A Putative oxidoreductase 97.8 3.9E-05 1.3E-09 79.0 8.6 69 4-118 9-80 (315)
205 3rc1_A Sugar 3-ketoreductase; 97.8 7.8E-05 2.7E-09 78.1 10.9 71 5-119 27-101 (350)
206 3evn_A Oxidoreductase, GFO/IDH 97.8 3.1E-05 1.1E-09 80.2 7.4 76 1-119 1-79 (329)
207 3e82_A Putative oxidoreductase 97.8 0.0001 3.5E-09 77.5 11.2 101 4-168 6-112 (364)
208 3m2t_A Probable dehydrogenase; 97.7 6E-05 2.1E-09 79.2 9.1 75 1-118 1-79 (359)
209 1ydw_A AX110P-like protein; st 97.7 0.00016 5.5E-09 75.8 11.8 106 4-167 5-115 (362)
210 3ec7_A Putative dehydrogenase; 97.7 0.0001 3.6E-09 77.3 10.3 74 5-119 23-99 (357)
211 5mdh_A Malate dehydrogenase; o 97.7 0.0002 6.7E-09 74.8 12.1 123 5-168 3-140 (333)
212 2z2v_A Hypothetical protein PH 97.7 5E-05 1.7E-09 80.3 7.5 99 5-162 16-114 (365)
213 2glx_A 1,5-anhydro-D-fructose 97.7 0.00013 4.3E-09 75.4 9.7 69 6-118 1-73 (332)
214 4dio_A NAD(P) transhydrogenase 97.6 6.5E-05 2.2E-09 80.1 7.6 117 6-162 191-318 (405)
215 3p2y_A Alanine dehydrogenase/p 97.6 6.1E-05 2.1E-09 79.7 7.2 114 6-162 185-308 (381)
216 3d64_A Adenosylhomocysteinase; 97.6 0.00025 8.5E-09 77.6 12.1 92 5-160 277-368 (494)
217 1xea_A Oxidoreductase, GFO/IDH 97.6 8.3E-05 2.8E-09 76.8 8.0 71 5-118 2-74 (323)
218 1v8b_A Adenosylhomocysteinase; 97.6 0.00022 7.4E-09 77.7 11.5 92 5-160 257-348 (479)
219 2duw_A Putative COA-binding pr 97.6 4.4E-05 1.5E-09 70.0 4.9 86 6-158 14-105 (145)
220 4had_A Probable oxidoreductase 97.6 0.00015 5.2E-09 75.5 9.1 75 2-119 20-98 (350)
221 3ce6_A Adenosylhomocysteinase; 97.6 0.00027 9.2E-09 77.4 11.3 92 4-159 273-364 (494)
222 1y7t_A Malate dehydrogenase; N 97.6 0.00022 7.5E-09 73.9 9.8 114 2-155 1-130 (327)
223 2p2s_A Putative oxidoreductase 97.5 0.00028 9.6E-09 73.1 10.6 102 5-168 4-111 (336)
224 7mdh_A Protein (malate dehydro 97.5 0.00028 9.6E-09 74.6 10.6 126 4-167 31-168 (375)
225 3kux_A Putative oxidoreductase 97.5 0.00046 1.6E-08 72.1 12.0 70 4-119 6-79 (352)
226 1omo_A Alanine dehydrogenase; 97.5 0.00026 9E-09 73.4 10.0 99 5-162 125-223 (322)
227 3f4l_A Putative oxidoreductase 97.5 8.9E-05 3E-09 77.3 6.4 103 5-168 2-110 (345)
228 3bio_A Oxidoreductase, GFO/IDH 97.5 0.00058 2E-08 70.1 12.4 89 5-158 9-98 (304)
229 3ohs_X Trans-1,2-dihydrobenzen 97.5 0.00022 7.4E-09 74.0 9.2 74 5-119 2-78 (334)
230 3gdo_A Uncharacterized oxidore 97.5 0.0004 1.4E-08 72.8 11.2 73 1-119 1-77 (358)
231 1id1_A Putative potassium chan 97.5 0.00023 8E-09 65.0 7.8 40 6-72 4-44 (153)
232 3l9w_A Glutathione-regulated p 97.5 0.00024 8.1E-09 76.3 8.8 72 5-117 4-78 (413)
233 3h9u_A Adenosylhomocysteinase; 97.5 0.00043 1.5E-08 74.3 10.8 91 5-159 211-301 (436)
234 3hdj_A Probable ornithine cycl 97.4 0.00015 5.2E-09 74.9 6.9 99 5-162 121-219 (313)
235 1hye_A L-lactate/malate dehydr 97.4 0.00073 2.5E-08 69.7 11.8 121 6-167 1-132 (313)
236 3abi_A Putative uncharacterize 97.4 9.8E-05 3.3E-09 77.8 4.5 73 4-117 15-87 (365)
237 2ixa_A Alpha-N-acetylgalactosa 97.3 0.0026 8.9E-08 68.6 15.5 77 5-119 20-103 (444)
238 2egg_A AROE, shikimate 5-dehyd 97.3 0.00038 1.3E-08 71.4 8.1 105 5-162 141-246 (297)
239 3moi_A Probable dehydrogenase; 97.3 0.0005 1.7E-08 72.8 9.1 71 5-119 2-76 (387)
240 1up7_A 6-phospho-beta-glucosid 97.3 0.0021 7E-08 69.0 13.8 82 5-119 2-85 (417)
241 3u95_A Glycoside hydrolase, fa 97.3 0.0028 9.7E-08 69.1 15.1 82 6-116 1-85 (477)
242 2vhw_A Alanine dehydrogenase; 97.2 0.00076 2.6E-08 71.4 9.5 100 5-156 168-268 (377)
243 3u62_A Shikimate dehydrogenase 97.2 0.0004 1.4E-08 69.6 6.9 92 7-158 110-202 (253)
244 1dih_A Dihydrodipicolinate red 97.2 0.00067 2.3E-08 68.7 8.6 166 1-226 1-179 (273)
245 3ew7_A LMO0794 protein; Q8Y8U8 97.2 0.00048 1.6E-08 65.9 7.2 104 6-158 1-105 (221)
246 3dty_A Oxidoreductase, GFO/IDH 97.2 0.00056 1.9E-08 72.7 8.2 74 5-119 12-97 (398)
247 3u3x_A Oxidoreductase; structu 97.2 0.00054 1.8E-08 72.0 8.0 70 5-118 26-99 (361)
248 3n58_A Adenosylhomocysteinase; 97.2 0.0019 6.6E-08 69.4 12.2 90 5-158 247-336 (464)
249 3fhl_A Putative oxidoreductase 97.2 0.00036 1.2E-08 73.2 6.5 73 1-119 1-77 (362)
250 1h6d_A Precursor form of gluco 97.2 0.00054 1.8E-08 73.9 8.0 76 5-119 83-162 (433)
251 1zh8_A Oxidoreductase; TM0312, 97.2 0.0012 4.2E-08 68.5 10.2 74 4-119 17-94 (340)
252 2aef_A Calcium-gated potassium 97.2 0.00024 8.1E-09 69.7 4.4 40 5-72 9-48 (234)
253 3dhn_A NAD-dependent epimerase 97.2 0.00018 6.3E-09 69.4 3.4 112 2-157 1-113 (227)
254 3ius_A Uncharacterized conserv 97.1 0.00062 2.1E-08 68.1 7.3 42 5-73 5-46 (286)
255 3btv_A Galactose/lactose metab 97.1 0.00047 1.6E-08 74.4 6.8 74 5-118 20-100 (438)
256 3oqb_A Oxidoreductase; structu 97.1 0.0029 9.9E-08 66.6 12.8 117 1-168 2-128 (383)
257 3gvp_A Adenosylhomocysteinase 97.1 0.0026 8.8E-08 68.2 12.2 90 5-158 220-309 (435)
258 3v5n_A Oxidoreductase; structu 97.1 0.0013 4.4E-08 70.5 10.0 72 6-119 38-122 (417)
259 4g65_A TRK system potassium up 97.1 0.00095 3.3E-08 72.6 8.9 43 4-73 2-44 (461)
260 3qy9_A DHPR, dihydrodipicolina 97.1 0.002 7E-08 64.1 10.6 144 5-225 3-157 (243)
261 3don_A Shikimate dehydrogenase 97.1 0.00018 6.2E-09 73.1 2.7 99 5-162 117-216 (277)
262 4gqa_A NAD binding oxidoreduct 97.1 0.00072 2.5E-08 72.1 7.4 80 2-119 23-108 (412)
263 2nvw_A Galactose/lactose metab 97.1 0.00081 2.8E-08 73.5 8.0 74 5-118 39-119 (479)
264 2eez_A Alanine dehydrogenase; 97.0 0.00061 2.1E-08 71.9 6.2 103 6-160 167-270 (369)
265 3kb6_A D-lactate dehydrogenase 97.0 0.004 1.4E-07 64.9 12.2 99 6-166 142-240 (334)
266 3h2s_A Putative NADH-flavin re 97.0 0.002 6.8E-08 61.8 9.2 72 6-118 1-73 (224)
267 1x13_A NAD(P) transhydrogenase 97.0 0.0012 4.2E-08 70.4 8.0 111 6-157 173-293 (401)
268 3r6d_A NAD-dependent epimerase 97.0 0.002 7E-08 61.9 8.8 101 5-158 4-110 (221)
269 1f06_A MESO-diaminopimelate D- 96.9 0.001 3.5E-08 68.8 6.9 89 5-159 3-92 (320)
270 4gmf_A Yersiniabactin biosynth 96.9 0.0014 4.7E-08 69.4 7.2 106 5-168 7-113 (372)
271 4f3y_A DHPR, dihydrodipicolina 96.8 0.004 1.4E-07 63.0 10.1 162 5-227 7-181 (272)
272 3e8x_A Putative NAD-dependent 96.8 0.0027 9.3E-08 61.7 8.4 72 5-117 21-94 (236)
273 1gpj_A Glutamyl-tRNA reductase 96.8 0.0052 1.8E-07 65.6 11.1 69 5-118 167-238 (404)
274 3i23_A Oxidoreductase, GFO/IDH 96.7 0.017 5.7E-07 60.1 14.0 72 5-119 2-77 (349)
275 3upl_A Oxidoreductase; rossman 96.7 0.0069 2.4E-07 65.3 11.1 108 5-155 23-138 (446)
276 1hdo_A Biliverdin IX beta redu 96.7 0.0032 1.1E-07 59.2 7.5 108 6-157 4-112 (206)
277 3ulk_A Ketol-acid reductoisome 96.7 0.0076 2.6E-07 64.4 10.9 95 5-158 37-134 (491)
278 4fb5_A Probable oxidoreductase 96.7 0.0017 5.8E-08 68.0 6.1 77 7-119 27-106 (393)
279 1l7d_A Nicotinamide nucleotide 96.6 0.0037 1.3E-07 66.2 7.9 114 5-157 172-295 (384)
280 3qvo_A NMRA family protein; st 96.6 0.0026 8.8E-08 62.1 6.1 74 5-117 23-98 (236)
281 2axq_A Saccharopine dehydrogen 96.5 0.0066 2.3E-07 66.1 9.9 104 5-164 23-127 (467)
282 1leh_A Leucine dehydrogenase; 96.5 0.0055 1.9E-07 64.5 8.7 42 5-73 173-214 (364)
283 3m2p_A UDP-N-acetylglucosamine 96.5 0.0039 1.3E-07 63.1 7.4 112 5-161 2-114 (311)
284 1ff9_A Saccharopine reductase; 96.5 0.0082 2.8E-07 65.0 10.3 104 5-163 3-106 (450)
285 3oa2_A WBPB; oxidoreductase, s 96.5 0.0061 2.1E-07 62.8 8.5 71 4-119 2-85 (318)
286 3d4o_A Dipicolinate synthase s 96.4 0.038 1.3E-06 56.0 14.2 165 393-592 4-188 (293)
287 1pjc_A Protein (L-alanine dehy 96.4 0.0092 3.1E-07 62.6 9.7 102 6-161 168-272 (361)
288 3dqp_A Oxidoreductase YLBE; al 96.4 0.0016 5.4E-08 62.6 3.6 105 6-157 1-107 (219)
289 3phh_A Shikimate dehydrogenase 96.4 0.0021 7.3E-08 64.9 4.6 96 6-162 119-214 (269)
290 3o8q_A Shikimate 5-dehydrogena 96.4 0.0028 9.7E-08 64.4 5.5 102 5-163 126-228 (281)
291 4g2n_A D-isomer specific 2-hyd 96.4 0.01 3.6E-07 61.9 10.0 96 392-511 171-270 (345)
292 3jtm_A Formate dehydrogenase, 96.4 0.011 3.9E-07 61.8 10.2 96 391-507 161-257 (351)
293 3eag_A UDP-N-acetylmuramate:L- 96.4 0.026 9.1E-07 58.2 12.9 113 4-168 3-127 (326)
294 4h3v_A Oxidoreductase domain p 96.4 0.0036 1.2E-07 65.4 6.3 78 6-119 7-87 (390)
295 3o9z_A Lipopolysaccaride biosy 96.4 0.005 1.7E-07 63.3 7.2 71 4-119 2-84 (312)
296 1iuk_A Hypothetical protein TT 96.4 0.0026 9E-08 57.7 4.4 88 6-158 14-105 (140)
297 3jyo_A Quinate/shikimate dehyd 96.3 0.016 5.4E-07 58.9 10.6 76 5-118 127-205 (283)
298 1nvm_B Acetaldehyde dehydrogen 96.3 0.0068 2.3E-07 62.5 7.7 74 1-117 1-81 (312)
299 4gbj_A 6-phosphogluconate dehy 96.3 0.011 3.6E-07 60.5 9.0 107 394-521 5-118 (297)
300 2czc_A Glyceraldehyde-3-phosph 96.3 0.0029 1E-07 65.8 4.9 85 5-118 2-90 (334)
301 3lk7_A UDP-N-acetylmuramoylala 96.3 0.048 1.6E-06 58.8 14.5 112 5-168 9-131 (451)
302 2d59_A Hypothetical protein PH 96.2 0.0097 3.3E-07 54.1 7.6 82 6-154 23-108 (144)
303 3gg9_A D-3-phosphoglycerate de 96.1 0.0099 3.4E-07 62.3 7.8 94 392-507 158-252 (352)
304 2vt3_A REX, redox-sensing tran 96.1 0.0023 7.9E-08 62.5 2.7 68 5-117 85-155 (215)
305 4ew6_A D-galactose-1-dehydroge 96.1 0.0096 3.3E-07 61.6 7.5 63 5-118 25-92 (330)
306 1b7g_O Protein (glyceraldehyde 96.1 0.018 6.2E-07 60.0 9.6 84 6-118 2-88 (340)
307 1y1p_A ARII, aldehyde reductas 96.0 0.03 1E-06 56.9 10.8 41 5-72 11-52 (342)
308 3gvx_A Glycerate dehydrogenase 96.0 0.016 5.5E-07 59.0 8.6 90 392-507 120-210 (290)
309 4hv4_A UDP-N-acetylmuramate--L 96.0 0.04 1.4E-06 60.2 12.4 113 3-168 20-141 (494)
310 2nu8_A Succinyl-COA ligase [AD 96.0 0.013 4.4E-07 59.7 7.9 68 3-118 5-75 (288)
311 3ip3_A Oxidoreductase, putativ 96.0 0.0031 1.1E-07 65.3 3.2 73 5-118 2-78 (337)
312 1xq6_A Unknown protein; struct 95.9 0.018 6.2E-07 55.7 8.3 74 4-117 3-79 (253)
313 1p77_A Shikimate 5-dehydrogena 95.9 0.0077 2.6E-07 60.6 5.8 72 5-119 119-192 (272)
314 3ond_A Adenosylhomocysteinase; 95.9 0.02 6.9E-07 62.3 9.3 89 5-157 265-353 (488)
315 4e5n_A Thermostable phosphite 95.9 0.019 6.6E-07 59.5 8.7 94 392-507 143-237 (330)
316 4hy3_A Phosphoglycerate oxidor 95.8 0.025 8.4E-07 59.6 9.5 93 392-507 174-267 (365)
317 2rir_A Dipicolinate synthase, 95.8 0.11 3.7E-06 52.8 14.2 166 392-592 5-190 (300)
318 1cf2_P Protein (glyceraldehyde 95.8 0.006 2.1E-07 63.6 4.8 21 6-26 2-22 (337)
319 3gpi_A NAD-dependent epimerase 95.8 0.0023 7.9E-08 64.0 1.5 36 5-67 3-38 (286)
320 1lc0_A Biliverdin reductase A; 95.8 0.019 6.4E-07 58.4 8.3 22 5-26 7-28 (294)
321 2nac_A NAD-dependent formate d 95.8 0.031 1.1E-06 59.4 10.2 96 391-507 188-284 (393)
322 3e48_A Putative nucleoside-dip 95.8 0.0088 3E-07 59.7 5.7 73 6-117 1-75 (289)
323 1nyt_A Shikimate 5-dehydrogena 95.8 0.017 5.8E-07 58.0 7.8 99 5-160 119-218 (271)
324 4dgs_A Dehydrogenase; structur 95.8 0.021 7E-07 59.6 8.5 90 391-507 168-259 (340)
325 3ngx_A Bifunctional protein fo 95.8 0.03 1E-06 56.4 9.4 75 5-159 150-225 (276)
326 1qyd_A Pinoresinol-lariciresin 95.8 0.019 6.4E-07 57.9 7.9 75 4-117 3-86 (313)
327 1p9l_A Dihydrodipicolinate red 95.8 0.095 3.3E-06 52.0 12.8 21 6-26 1-22 (245)
328 1jw9_B Molybdopterin biosynthe 95.8 0.016 5.3E-07 57.7 7.1 33 6-65 32-65 (249)
329 1mx3_A CTBP1, C-terminal bindi 95.7 0.029 9.9E-07 58.6 9.3 95 391-508 165-261 (347)
330 2x4g_A Nucleoside-diphosphate- 95.7 0.0088 3E-07 61.0 5.3 73 5-116 13-86 (342)
331 2w2k_A D-mandelate dehydrogena 95.7 0.035 1.2E-06 57.9 9.9 97 391-508 160-258 (348)
332 1lnq_A MTHK channels, potassiu 95.7 0.0062 2.1E-07 62.9 4.0 68 6-116 116-186 (336)
333 1u8f_O GAPDH, glyceraldehyde-3 95.7 0.038 1.3E-06 57.4 9.9 22 5-26 3-24 (335)
334 3mtj_A Homoserine dehydrogenas 95.6 0.035 1.2E-06 59.9 9.8 79 1-117 7-88 (444)
335 4b4o_A Epimerase family protei 95.6 0.021 7.1E-07 57.4 7.6 33 6-65 1-34 (298)
336 2pi1_A D-lactate dehydrogenase 95.6 0.027 9.3E-07 58.5 8.6 97 392-513 139-239 (334)
337 1c0p_A D-amino acid oxidase; a 95.6 0.012 4.2E-07 60.8 6.0 37 1-64 2-38 (363)
338 3pwz_A Shikimate dehydrogenase 95.6 0.025 8.5E-07 57.1 8.0 101 5-163 120-222 (272)
339 2j6i_A Formate dehydrogenase; 95.6 0.04 1.4E-06 57.9 9.9 95 391-507 161-258 (364)
340 3obb_A Probable 3-hydroxyisobu 95.6 0.025 8.4E-07 57.9 8.1 107 395-522 4-119 (300)
341 1qyc_A Phenylcoumaran benzylic 95.6 0.011 3.7E-07 59.5 5.4 76 3-117 2-87 (308)
342 4ina_A Saccharopine dehydrogen 95.6 0.027 9.1E-07 60.0 8.6 41 6-73 2-45 (405)
343 1a4i_A Methylenetetrahydrofola 95.6 0.043 1.5E-06 56.0 9.6 75 5-159 165-240 (301)
344 3evt_A Phosphoglycerate dehydr 95.5 0.026 8.9E-07 58.4 7.9 92 392-507 135-228 (324)
345 2jl1_A Triphenylmethane reduct 95.5 0.017 5.7E-07 57.5 6.2 73 6-117 1-76 (287)
346 1gdh_A D-glycerate dehydrogena 95.5 0.046 1.6E-06 56.4 9.6 94 392-507 144-239 (320)
347 3kkj_A Amine oxidase, flavin-c 95.4 0.012 4E-07 55.7 4.8 32 6-64 3-34 (336)
348 2yq5_A D-isomer specific 2-hyd 95.4 0.034 1.2E-06 58.0 8.6 90 392-507 146-237 (343)
349 3do5_A HOM, homoserine dehydro 95.4 0.05 1.7E-06 56.4 9.7 113 5-160 2-119 (327)
350 1npy_A Hypothetical shikimate 95.4 0.021 7.2E-07 57.6 6.7 68 5-119 119-187 (271)
351 2g76_A 3-PGDH, D-3-phosphoglyc 95.4 0.057 1.9E-06 56.1 10.1 92 392-507 163-256 (335)
352 4hb9_A Similarities with proba 95.4 0.0094 3.2E-07 62.1 4.2 33 6-65 2-34 (412)
353 3qha_A Putative oxidoreductase 95.3 0.054 1.8E-06 54.9 9.6 94 394-509 15-108 (296)
354 3pef_A 6-phosphogluconate dehy 95.3 0.03 1E-06 56.3 7.6 94 395-509 2-98 (287)
355 4a26_A Putative C-1-tetrahydro 95.3 0.045 1.5E-06 55.8 8.8 75 5-159 165-242 (300)
356 1sc6_A PGDH, D-3-phosphoglycer 95.3 0.05 1.7E-06 58.0 9.6 95 391-511 142-240 (404)
357 3fbt_A Chorismate mutase and s 95.3 0.024 8.4E-07 57.5 6.9 67 5-118 122-189 (282)
358 1wwk_A Phosphoglycerate dehydr 95.3 0.054 1.9E-06 55.5 9.6 92 392-507 140-233 (307)
359 1b0a_A Protein (fold bifunctio 95.3 0.048 1.6E-06 55.3 8.9 74 5-158 159-233 (288)
360 2d0i_A Dehydrogenase; structur 95.3 0.052 1.8E-06 56.3 9.4 93 391-507 143-236 (333)
361 3dr3_A N-acetyl-gamma-glutamyl 95.2 0.032 1.1E-06 58.0 7.5 23 4-26 3-26 (337)
362 1y56_B Sarcosine oxidase; dehy 95.2 0.015 5.2E-07 60.3 5.0 37 1-64 1-37 (382)
363 2c5a_A GDP-mannose-3', 5'-epim 95.2 0.011 3.9E-07 61.7 4.0 37 4-67 28-65 (379)
364 3ba1_A HPPR, hydroxyphenylpyru 95.1 0.046 1.6E-06 56.7 8.5 91 392-508 162-253 (333)
365 3tnl_A Shikimate dehydrogenase 95.1 0.078 2.7E-06 54.6 10.0 75 5-118 154-237 (315)
366 2gcg_A Glyoxylate reductase/hy 95.1 0.059 2E-06 55.8 9.1 94 392-508 153-248 (330)
367 3k5p_A D-3-phosphoglycerate de 95.1 0.06 2E-06 57.6 9.3 95 392-512 154-252 (416)
368 3hg7_A D-isomer specific 2-hyd 95.1 0.026 8.9E-07 58.4 6.3 97 392-512 138-238 (324)
369 2zcu_A Uncharacterized oxidore 95.1 0.017 5.7E-07 57.3 4.7 72 7-117 1-75 (286)
370 1ygy_A PGDH, D-3-phosphoglycer 95.1 0.054 1.8E-06 59.8 9.2 93 392-507 140-233 (529)
371 4dll_A 2-hydroxy-3-oxopropiona 95.0 0.048 1.6E-06 56.0 8.2 95 393-509 30-127 (320)
372 4dpl_A Malonyl-COA/succinyl-CO 95.0 0.015 5.2E-07 61.0 4.4 31 2-33 4-35 (359)
373 4dpk_A Malonyl-COA/succinyl-CO 95.0 0.015 5.2E-07 61.0 4.4 31 2-33 4-35 (359)
374 3doj_A AT3G25530, dehydrogenas 95.0 0.037 1.3E-06 56.5 7.2 96 393-509 20-118 (310)
375 3p2o_A Bifunctional protein fo 95.0 0.08 2.7E-06 53.6 9.4 74 5-158 160-234 (285)
376 2dbq_A Glyoxylate reductase; D 95.0 0.076 2.6E-06 55.0 9.6 93 392-507 148-241 (334)
377 2ekl_A D-3-phosphoglycerate de 95.0 0.068 2.3E-06 54.9 9.1 92 392-507 140-233 (313)
378 3pdu_A 3-hydroxyisobutyrate de 95.0 0.04 1.4E-06 55.5 7.3 94 395-509 2-98 (287)
379 1xgk_A Nitrogen metabolite rep 95.0 0.16 5.3E-06 52.7 12.0 41 1-68 1-42 (352)
380 4id9_A Short-chain dehydrogena 95.0 0.014 4.7E-07 59.9 3.9 67 5-116 19-86 (347)
381 3ruf_A WBGU; rossmann fold, UD 95.0 0.032 1.1E-06 57.1 6.7 81 4-116 24-109 (351)
382 3l07_A Bifunctional protein fo 94.9 0.091 3.1E-06 53.2 9.6 75 5-159 161-236 (285)
383 3ijp_A DHPR, dihydrodipicolina 94.9 0.017 5.7E-07 58.8 4.1 100 4-158 20-121 (288)
384 2yyy_A Glyceraldehyde-3-phosph 94.9 0.073 2.5E-06 55.5 9.0 21 6-26 3-23 (343)
385 1edz_A 5,10-methylenetetrahydr 94.8 0.01 3.5E-07 61.2 2.5 74 5-118 177-256 (320)
386 1qp8_A Formate dehydrogenase; 94.8 0.085 2.9E-06 54.0 9.4 88 392-507 122-211 (303)
387 2r6j_A Eugenol synthase 1; phe 94.8 0.028 9.7E-07 56.9 5.8 72 6-116 12-88 (318)
388 2h78_A Hibadh, 3-hydroxyisobut 94.8 0.061 2.1E-06 54.4 8.2 93 395-509 4-100 (302)
389 4a5o_A Bifunctional protein fo 94.8 0.096 3.3E-06 53.0 9.4 75 5-159 161-236 (286)
390 1oi7_A Succinyl-COA synthetase 94.8 0.053 1.8E-06 55.1 7.5 68 2-117 4-74 (288)
391 3oh8_A Nucleoside-diphosphate 94.7 0.014 4.7E-07 64.0 3.3 36 5-67 147-183 (516)
392 2dt5_A AT-rich DNA-binding pro 94.7 0.0093 3.2E-07 58.0 1.6 69 5-117 80-150 (211)
393 4e21_A 6-phosphogluconate dehy 94.6 0.07 2.4E-06 55.9 8.2 108 393-522 21-137 (358)
394 2gas_A Isoflavone reductase; N 94.6 0.02 7E-07 57.4 3.9 74 5-117 2-86 (307)
395 3st7_A Capsular polysaccharide 94.6 0.097 3.3E-06 54.2 9.2 32 6-64 1-34 (369)
396 3pp8_A Glyoxylate/hydroxypyruv 94.5 0.039 1.3E-06 56.8 6.0 98 392-512 137-237 (315)
397 2yv1_A Succinyl-COA ligase [AD 94.5 0.07 2.4E-06 54.4 7.8 98 5-166 13-113 (294)
398 2wm3_A NMRA-like family domain 94.5 0.032 1.1E-06 56.0 5.2 75 3-116 3-81 (299)
399 2ydy_A Methionine adenosyltran 94.4 0.094 3.2E-06 52.7 8.5 36 5-67 2-38 (315)
400 3c1o_A Eugenol synthase; pheny 94.4 0.028 9.4E-07 57.0 4.4 74 4-116 3-86 (321)
401 3oet_A Erythronate-4-phosphate 94.4 0.083 2.8E-06 55.8 8.1 97 390-513 115-219 (381)
402 3qsg_A NAD-binding phosphogluc 94.4 0.11 3.7E-06 53.2 8.8 96 394-509 24-120 (312)
403 3kb6_A D-lactate dehydrogenase 94.3 0.11 3.6E-06 54.0 8.7 98 392-514 139-240 (334)
404 2ep5_A 350AA long hypothetical 94.3 0.046 1.6E-06 57.1 5.9 29 4-33 3-32 (350)
405 2ejw_A HDH, homoserine dehydro 94.3 0.015 5.3E-07 60.3 2.3 22 5-26 3-24 (332)
406 1orr_A CDP-tyvelose-2-epimeras 94.3 0.064 2.2E-06 54.5 6.9 32 6-64 2-34 (347)
407 2rh8_A Anthocyanidin reductase 94.3 0.26 8.9E-06 49.9 11.5 35 5-66 9-44 (338)
408 1j4a_A D-LDH, D-lactate dehydr 94.3 0.099 3.4E-06 54.2 8.3 91 392-507 144-236 (333)
409 2zbw_A Thioredoxin reductase; 94.3 0.036 1.2E-06 56.2 5.0 38 1-65 1-38 (335)
410 3fpf_A Mtnas, putative unchara 94.2 0.46 1.6E-05 48.4 13.0 98 4-156 122-222 (298)
411 3slg_A PBGP3 protein; structur 94.2 0.019 6.6E-07 59.4 2.9 74 5-116 24-100 (372)
412 1dxy_A D-2-hydroxyisocaproate 94.2 0.11 3.6E-06 54.0 8.3 97 392-514 143-243 (333)
413 2vou_A 2,6-dihydroxypyridine h 94.1 0.039 1.3E-06 57.9 5.0 26 1-26 1-26 (397)
414 3g0o_A 3-hydroxyisobutyrate de 94.1 0.056 1.9E-06 54.9 6.1 95 394-509 7-105 (303)
415 3t4e_A Quinate/shikimate dehyd 94.1 0.22 7.5E-06 51.2 10.5 76 5-119 148-232 (312)
416 3keo_A Redox-sensing transcrip 94.0 0.023 8E-07 55.2 2.8 71 5-118 84-159 (212)
417 2f00_A UDP-N-acetylmuramate--L 94.0 0.17 5.7E-06 55.2 10.0 113 3-168 17-138 (491)
418 2c29_D Dihydroflavonol 4-reduc 93.9 0.059 2E-06 54.9 5.8 39 1-66 1-40 (337)
419 1y81_A Conserved hypothetical 93.9 0.25 8.7E-06 44.3 9.3 67 393-481 13-79 (138)
420 2ozp_A N-acetyl-gamma-glutamyl 93.9 0.047 1.6E-06 57.0 5.0 25 1-26 1-26 (345)
421 3i6i_A Putative leucoanthocyan 93.9 0.06 2.1E-06 55.2 5.8 73 6-117 11-93 (346)
422 2bka_A CC3, TAT-interacting pr 93.9 0.011 3.7E-07 57.3 0.1 35 6-67 19-56 (242)
423 1nvt_A Shikimate 5'-dehydrogen 93.8 0.076 2.6E-06 53.6 6.3 107 5-160 128-234 (287)
424 2bll_A Protein YFBG; decarboxy 93.7 0.14 4.8E-06 51.9 8.2 38 6-70 1-40 (345)
425 1p3d_A UDP-N-acetylmuramate--a 93.7 0.18 6E-06 54.7 9.4 117 3-168 16-137 (475)
426 1xyg_A Putative N-acetyl-gamma 93.7 0.11 3.7E-06 54.4 7.3 21 6-26 17-38 (359)
427 3e5r_O PP38, glyceraldehyde-3- 93.6 0.25 8.7E-06 51.2 10.0 21 6-26 4-24 (337)
428 2yv2_A Succinyl-COA synthetase 93.6 0.15 5E-06 52.1 7.9 100 3-166 11-114 (297)
429 2cuk_A Glycerate dehydrogenase 93.6 0.17 5.7E-06 52.0 8.4 87 392-507 142-230 (311)
430 1vkn_A N-acetyl-gamma-glutamyl 93.6 0.11 3.6E-06 54.4 7.0 32 5-37 13-45 (351)
431 1sb8_A WBPP; epimerase, 4-epim 93.5 0.13 4.6E-06 52.6 7.7 34 5-65 27-61 (352)
432 3dme_A Conserved exported prot 93.5 0.058 2E-06 55.0 4.9 33 5-64 4-36 (369)
433 4gx0_A TRKA domain protein; me 93.5 0.051 1.7E-06 60.2 4.7 39 6-71 349-387 (565)
434 3i6d_A Protoporphyrinogen oxid 93.5 0.038 1.3E-06 58.8 3.5 39 1-39 1-43 (470)
435 3dtt_A NADP oxidoreductase; st 93.4 0.1 3.5E-06 51.3 6.3 99 391-509 16-127 (245)
436 2c2x_A Methylenetetrahydrofola 93.4 0.11 3.7E-06 52.5 6.5 54 5-118 158-214 (281)
437 1xdw_A NAD+-dependent (R)-2-hy 93.4 0.14 4.9E-06 52.9 7.7 90 392-507 144-235 (331)
438 4egb_A DTDP-glucose 4,6-dehydr 93.4 0.017 5.9E-07 59.1 0.6 23 4-26 23-46 (346)
439 1oc2_A DTDP-glucose 4,6-dehydr 93.4 0.024 8.1E-07 58.0 1.6 37 4-65 3-40 (348)
440 2b0j_A 5,10-methenyltetrahydro 93.4 0.43 1.5E-05 48.0 10.5 59 93-165 127-185 (358)
441 3nix_A Flavoprotein/dehydrogen 93.3 0.052 1.8E-06 57.0 4.3 38 1-65 1-38 (421)
442 2duw_A Putative COA-binding pr 93.3 0.23 8E-06 44.9 8.0 68 394-481 13-80 (145)
443 1yvv_A Amine oxidase, flavin-c 93.3 0.065 2.2E-06 54.2 4.8 33 6-65 3-35 (336)
444 3ko8_A NAD-dependent epimerase 93.3 0.054 1.8E-06 54.4 4.1 35 6-67 1-36 (312)
445 1ys4_A Aspartate-semialdehyde 93.2 0.12 4.2E-06 53.9 6.9 21 6-26 9-30 (354)
446 1np3_A Ketol-acid reductoisome 93.2 0.14 4.8E-06 53.0 7.2 94 393-508 15-109 (338)
447 3ggo_A Prephenate dehydrogenas 93.2 0.28 9.5E-06 50.2 9.4 96 393-508 32-130 (314)
448 3hn7_A UDP-N-acetylmuramate-L- 93.2 0.67 2.3E-05 50.9 13.0 112 5-168 19-141 (524)
449 2x3n_A Probable FAD-dependent 93.2 0.064 2.2E-06 56.1 4.6 38 1-65 1-39 (399)
450 4dgk_A Phytoene dehydrogenase; 93.1 0.054 1.9E-06 58.4 4.1 34 5-65 1-34 (501)
451 3pwk_A Aspartate-semialdehyde 93.0 0.17 5.9E-06 53.1 7.7 22 5-26 2-24 (366)
452 2x5o_A UDP-N-acetylmuramoylala 93.0 0.19 6.5E-06 53.8 8.2 114 5-170 5-125 (439)
453 1c1d_A L-phenylalanine dehydro 93.0 0.18 6.2E-06 52.7 7.7 36 5-67 175-210 (355)
454 3dfz_A SIRC, precorrin-2 dehyd 93.0 0.34 1.2E-05 47.3 9.2 69 5-117 31-101 (223)
455 2oln_A NIKD protein; flavoprot 93.0 0.077 2.6E-06 55.4 4.9 34 5-65 4-37 (397)
456 3ihm_A Styrene monooxygenase A 92.9 0.074 2.5E-06 56.7 4.7 33 6-65 23-55 (430)
457 3rp8_A Flavoprotein monooxygen 92.9 0.095 3.3E-06 55.0 5.5 34 5-65 23-56 (407)
458 2nqt_A N-acetyl-gamma-glutamyl 92.9 0.12 4E-06 54.1 6.0 22 5-26 9-31 (352)
459 3dje_A Fructosyl amine: oxygen 92.8 0.097 3.3E-06 55.4 5.5 23 4-26 5-27 (438)
460 4ezb_A Uncharacterized conserv 92.8 0.23 7.8E-06 50.9 8.1 95 394-509 24-124 (317)
461 3c8m_A Homoserine dehydrogenas 92.8 0.14 4.7E-06 53.1 6.4 22 5-26 6-27 (331)
462 3v76_A Flavoprotein; structura 92.8 0.066 2.3E-06 57.1 4.1 39 1-66 23-61 (417)
463 3v8b_A Putative dehydrogenase, 92.8 1.7 5.8E-05 43.3 14.3 39 7-72 30-69 (283)
464 2ywl_A Thioredoxin reductase r 92.7 0.11 3.7E-06 47.9 5.0 33 6-65 2-34 (180)
465 3pk0_A Short-chain dehydrogena 92.7 4.7 0.00016 39.3 17.4 39 7-72 12-51 (262)
466 2izz_A Pyrroline-5-carboxylate 92.6 0.37 1.3E-05 49.3 9.4 99 394-512 22-124 (322)
467 3hsk_A Aspartate-semialdehyde 92.6 0.14 4.7E-06 54.2 6.1 28 5-33 19-47 (381)
468 3h9u_A Adenosylhomocysteinase; 92.5 0.34 1.2E-05 51.9 9.1 107 385-516 202-311 (436)
469 1vl6_A Malate oxidoreductase; 92.5 0.29 1E-05 51.5 8.5 94 6-157 193-295 (388)
470 1zud_1 Adenylyltransferase THI 92.5 0.29 9.8E-06 48.5 8.0 40 6-72 29-69 (251)
471 1vpd_A Tartronate semialdehyde 92.5 0.22 7.6E-06 49.9 7.4 94 395-509 6-102 (299)
472 2r00_A Aspartate-semialdehyde 92.4 0.24 8.3E-06 51.3 7.7 33 5-37 3-37 (336)
473 3atr_A Conserved archaeal prot 92.4 0.042 1.4E-06 58.9 2.0 39 1-66 2-40 (453)
474 2zyd_A 6-phosphogluconate dehy 92.4 0.31 1.1E-05 53.0 8.9 100 392-510 13-117 (480)
475 3ay3_A NAD-dependent epimerase 92.4 0.015 5.1E-07 57.4 -1.5 71 5-117 2-73 (267)
476 3oz2_A Digeranylgeranylglycero 92.4 0.074 2.5E-06 54.7 3.7 32 7-65 6-37 (397)
477 4gx0_A TRKA domain protein; me 92.4 0.17 5.8E-06 55.9 6.9 107 395-520 349-457 (565)
478 2p4q_A 6-phosphogluconate dehy 92.3 0.35 1.2E-05 52.9 9.2 100 394-510 10-113 (497)
479 3tfo_A Putative 3-oxoacyl-(acy 92.3 2.8 9.6E-05 41.3 15.2 40 6-72 5-45 (264)
480 2hjs_A USG-1 protein homolog; 92.3 0.24 8.3E-06 51.4 7.6 22 5-26 6-28 (340)
481 4f6c_A AUSA reductase domain p 92.3 0.29 9.8E-06 51.8 8.4 35 5-66 69-104 (427)
482 3l6d_A Putative oxidoreductase 92.3 0.17 5.9E-06 51.4 6.4 95 393-509 8-104 (306)
483 3rkr_A Short chain oxidoreduct 92.3 3.9 0.00013 39.9 16.1 40 6-72 30-70 (262)
484 2o4c_A Erythronate-4-phosphate 92.3 0.1 3.4E-06 55.2 4.7 95 391-512 113-215 (380)
485 3h2z_A Mannitol-1-phosphate 5- 92.3 0.074 2.5E-06 56.2 3.6 82 6-116 1-88 (382)
486 3d1l_A Putative NADP oxidoredu 92.2 0.38 1.3E-05 47.4 8.6 102 393-515 9-111 (266)
487 3nrn_A Uncharacterized protein 92.2 0.12 4.1E-06 54.4 5.1 32 6-64 1-32 (421)
488 3ihg_A RDME; flavoenzyme, anth 92.1 0.11 3.9E-06 56.7 5.0 38 1-65 1-38 (535)
489 3itj_A Thioredoxin reductase 1 92.1 0.092 3.1E-06 52.9 3.9 35 4-65 21-55 (338)
490 2dkn_A 3-alpha-hydroxysteroid 92.0 0.038 1.3E-06 53.6 0.9 35 6-67 2-37 (255)
491 3c96_A Flavin-containing monoo 92.0 0.13 4.5E-06 54.0 5.1 25 1-26 1-25 (410)
492 2xdo_A TETX2 protein; tetracyc 91.9 0.15 5.1E-06 53.4 5.5 33 6-65 27-59 (398)
493 2gf3_A MSOX, monomeric sarcosi 91.9 0.13 4.5E-06 53.1 5.0 22 5-26 3-24 (389)
494 3cky_A 2-hydroxymethyl glutara 91.9 0.33 1.1E-05 48.7 7.8 95 394-509 4-101 (301)
495 2fp4_A Succinyl-COA ligase [GD 91.9 0.34 1.2E-05 49.5 7.9 92 6-161 14-109 (305)
496 3g3e_A D-amino-acid oxidase; F 91.9 0.099 3.4E-06 53.6 4.0 21 6-26 1-21 (351)
497 4gwg_A 6-phosphogluconate dehy 91.9 0.52 1.8E-05 51.3 9.8 114 394-523 4-126 (484)
498 3jv7_A ADH-A; dehydrogenase, n 91.8 1.3 4.4E-05 45.4 12.3 43 5-73 172-214 (345)
499 2g5c_A Prephenate dehydrogenas 91.8 0.43 1.5E-05 47.4 8.5 95 395-509 2-99 (281)
500 3qiv_A Short-chain dehydrogena 91.7 4.9 0.00017 38.7 16.0 40 6-72 10-50 (253)
No 1
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=100.00 E-value=7e-83 Score=689.67 Aligned_cols=406 Identities=34% Similarity=0.528 Sum_probs=352.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|.+|+|||+||||+|+|..||+ .||+|+++|+|+++++.||+|..|++||+++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~---------------------------~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ 73 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFAL---------------------------LGHRVVGYDVNPSIVERLRAGRPHIYEPGLE 73 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------HTCEEEEECSCHHHHHHHHTTCCSSCCTTHH
T ss_pred CCEEEEEccCHHHHHHHHHHHh---------------------------CCCcEEEEECCHHHHHHHHCCCCCCCCCCHH
Confidence 5689999999999999999999 7999999999999999999999999999999
Q ss_pred HHHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+++.+.+ .+++++|+|+.+++++||++|||||||.+.+
T Consensus 74 ell~~~~~~g~l~~tt~~~~ai~~ad~~~I~VpTP~~~d----------------------------------------- 112 (444)
T 3vtf_A 74 EALGRALSSGRLSFAESAEEAVAATDATFIAVGTPPAPD----------------------------------------- 112 (444)
T ss_dssp HHHHHHHHTTCEEECSSHHHHHHTSSEEEECCCCCBCTT-----------------------------------------
T ss_pred HHHHHHHHcCCeeEEcCHHHHHhcCCceEEEecCCCCCC-----------------------------------------
Confidence 9998764 5789999999999999999999999997532
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhc---CCceEEEeccccchhhhhHH-HHHhhcccCCceeeEEE
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIAT---DNKIVVEKSTVPVRAAESIM-NVLKANHKTNVQFQILS 239 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~---~~~lvv~eSTvP~gtt~~~~-~~L~~~~~~g~~~~l~~ 239 (598)
+.|||+|+++|+++|+++++ ++.+||+|||||||||++++ +++++. ..|.+|.+++
T Consensus 113 -------------------~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~-~~~~~f~v~~ 172 (444)
T 3vtf_A 113 -------------------GSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEE-AGGVKFSVAS 172 (444)
T ss_dssp -------------------SSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTT-TTTCCCEEEE
T ss_pred -------------------CCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHh-CCCCCceeec
Confidence 35678888888888888886 46788999999999998765 455542 2467899999
Q ss_pred CCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 240 NPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLS 319 (598)
Q Consensus 240 ~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~ 319 (598)
+|||+++|.+++++.+|+||++|+.++ ++.+.++.+|+.+. .++.++++.+||++|+++|+|++++|+|+||++
T Consensus 173 ~PErl~eG~a~~d~~~~~riViG~~~~----~a~~~~~~ly~~~~--~~~~~~~~~~AE~~Kl~eN~~ravnIa~~NEla 246 (444)
T 3vtf_A 173 NPEFLREGSALEDFFKPDRIVIGAGDE----RAASFLLDVYKAVD--APKLVMKPREAELVKYASNVFLALKISFANEVG 246 (444)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEEEESSH----HHHHHHHHHTTTSC--SCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCccccccccCCcEEEcCCCH----HHHHHHHHHHhccC--CCEEEechhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998653 57888999999886 356678999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh--------HHH----HHHHHHHH
Q psy11160 320 AVCEATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE--------VAS----YWQQLYES 387 (598)
Q Consensus 320 ~la~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~--------~~~----~~~~~i~~ 387 (598)
.+|+++|+|++||++++++++|+|++|++||+||||||||||+++|.+.|++.|++. +++ ++.+.+..
T Consensus 247 ~ice~~GiDv~eV~~a~~~d~rig~~~l~PG~G~GG~CipkD~~~L~~~a~~~g~~~~li~a~~~iN~~~~~~vv~~l~~ 326 (444)
T 3vtf_A 247 LLAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGGSCFPKDTLAFIRFGESLGLEMAISKAVLRVNEYMPRYAVQLLEE 326 (444)
T ss_dssp HHHHHTTCCHHHHHHHHHTSTTSCSTTCCCSSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHhccCCCCCCCCCCCCCCCCCcccCcCHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999862 121 22233555
Q ss_pred HhcccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhh
Q psy11160 388 LFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYD 467 (598)
Q Consensus 388 ~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (598)
.++.++++||+||||||||||||+||||++.|++.|.++|++|.+|||++.++... .+ + . .+.++.++++
T Consensus 327 ~~~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~-~~-------~-~-~~~~~~~~~~ 396 (444)
T 3vtf_A 327 RLGGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARA-VL-------G-D-SVTYVEDPQA 396 (444)
T ss_dssp HHTCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHH-HH-------G-G-GSEECSCHHH
T ss_pred HccccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHH-hc-------C-C-CceecCCHHH
Confidence 55678899999999999999999999999999999999999999999998654332 11 1 1 4678899999
Q ss_pred hccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccc
Q psy11160 468 TVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVID 526 (598)
Q Consensus 468 al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~ 526 (598)
+++++|++||+|+|++|+++||. .++|||+||++++++. ..|++++.
T Consensus 397 a~~~aDavvi~t~h~ef~~ld~~--------~~vv~D~Rni~~~~~~----~~y~gigW 443 (444)
T 3vtf_A 397 LLDQVEGVIIATAWPQYEGLDYR--------GKVVVDGRYVKKAREA----KIYEGVAW 443 (444)
T ss_dssp HHHHCSEEEECSCCGGGGGSCCT--------TCEEEESSCCGGGGGS----SEEEESSC
T ss_pred HHhCCCEEEEccCCHHHhCCCcC--------CCEEEECCCCCChhhh----cceeeeec
Confidence 99999999999999999999862 3499999999998654 35666653
No 2
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=5.9e-78 Score=655.94 Aligned_cols=419 Identities=37% Similarity=0.587 Sum_probs=365.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
-+|+|||+||||++||.+|++ .||+|++||+++++++.++++..|++||++++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~---------------------------~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~ 61 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSD---------------------------FGHEVVCVDKDARKIELLHQNVMPIYEPGLDA 61 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCSTTHHHHTTTCCSSCCTTHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHhcCCCCccCCCHHH
Confidence 489999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 86 VVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
++.+.. .+++++|+|+.+++++||+||+|||||.+.. ++.+|++++++++++|++.++++++||++||++|||++
T Consensus 62 ~~~~~~~~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~----~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~ 137 (446)
T 4a7p_A 62 LVASNVKAGRLSFTTDLAEGVKDADAVFIAVGTPSRRG----DGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGD 137 (446)
T ss_dssp HHHHHHHTTCEEEESCHHHHHTTCSEEEECCCCCBCTT----TCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHH
T ss_pred HHHhhcccCCEEEECCHHHHHhcCCEEEEEcCCCCccc----cCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHH
Confidence 987654 5679999999999999999999999998531 24799999999999999999999999999999999998
Q ss_pred HHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCccc
Q psy11160 165 SIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFL 244 (598)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~ 244 (598)
++... +++.. .+.+|.++++|||+
T Consensus 138 ~l~~~-------------------------------------------------------l~e~~-~~~d~~v~~~Pe~a 161 (446)
T 4a7p_A 138 EVERI-------------------------------------------------------IAEVA-PNSGAKVVSNPEFL 161 (446)
T ss_dssp HHHHH-------------------------------------------------------HHHHS-TTSCCEEEECCCCC
T ss_pred HHHHH-------------------------------------------------------HHHhC-CCCCceEEeCcccc
Confidence 88652 22211 13578999999999
Q ss_pred CcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCc--eEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 245 SEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRK--HILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 245 ~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~--~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
++|.+++++.+|++|++|++++ ++.+.++++|+.++... ++++++.++||++|+++|+|++++|+|+||++.+|
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~~~----~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTEDE----FARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECSCH----HHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCCcH----HHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998753 57889999999987532 57789999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh--------HHH----HHHH-HHHHHh
Q psy11160 323 EATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE--------VAS----YWQQ-LYESLF 389 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~--------~~~----~~~~-~i~~~~ 389 (598)
+++|+|++++++++++++|+|+++++||+||||+|||||+++|.+.|++.|++. +++ ++.+ +.+.+.
T Consensus 238 ~~~GiD~~~v~~~~~~~~rig~~~l~pg~G~gg~c~~KD~~~l~~~A~~~g~~~~l~~~~~~iN~~~~~~~~~~i~~~l~ 317 (446)
T 4a7p_A 238 EQVGADVQEVSRGIGMDNRIGGKFLHAGPGYGGSCFPKDTLALMKTAADNETPLRIVEATVQVNDARKRAMGRKVIKAMG 317 (446)
T ss_dssp HHTTCCHHHHHHHHHTSTTC---CCCCCSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCHHHHHHHHhcCCCCCCccCCCCCCcchhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999861 111 1111 233333
Q ss_pred cccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhc
Q psy11160 390 NTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTV 469 (598)
Q Consensus 390 ~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 469 (598)
..++++||+||||||||||||+||||++.|++.|.++|++|.+|||++..+ ....+ +.+.++.++++++
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~----------~~~~~~~~~~~~~ 386 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQ-ASKML----------TDVEFVENPYAAA 386 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHH-HGGGC----------SSCCBCSCHHHHH
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHh-HHHhc----------CCceEecChhHHh
Confidence 357899999999999999999999999999999999999999999999643 22211 1356788999999
Q ss_pred cCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccch
Q psy11160 470 KNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVIDL 527 (598)
Q Consensus 470 ~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~i 527 (598)
+++|++||+|+|++|+++||+.+.+.|+.| +|||+||+++++++++.||.|+++|+.
T Consensus 387 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~iG~~ 443 (446)
T 4a7p_A 387 DGADALVIVTEWDAFRALDLTRIKNSLKSP-VLVDLRNIYPPAELERAGLQYTGVGKP 443 (446)
T ss_dssp TTBSEEEECSCCTTTTSCCHHHHHTTBSSC-BEECSSCCSCHHHHHHTTCBCCCSSCC
T ss_pred cCCCEEEEeeCCHHhhcCCHHHHHHhcCCC-EEEECCCCCCHHHHHhcCCEEEEecCC
Confidence 999999999999999999999999988876 899999999999999999999999874
No 3
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=100.00 E-value=1.9e-76 Score=640.23 Aligned_cols=402 Identities=23% Similarity=0.376 Sum_probs=341.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.+|..|||+||||++||.+|++ +||+|++||+|+++++.|++|..|++||+++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~---------------------------~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~ 63 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAK---------------------------HGVDVLGVDINQQTIDKLQNGQISIEEPGLQ 63 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHTTCCSSCCTTHH
T ss_pred CCccEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHHCCCCCcCCCCHH
Confidence 3689999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+++.+.+ .+++++|+|+ ++||+||+|||||.+.+. .+.+|+++++++.++|++.++++++||++||++|||+
T Consensus 64 ~ll~~~~~~g~l~~ttd~----~~aDvvii~VpTp~~~~~---~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt 136 (431)
T 3ojo_A 64 EVYEEVLSSGKLKVSTTP----EASDVFIIAVPTPNNDDQ---YRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTM 136 (431)
T ss_dssp HHHHHHHHTTCEEEESSC----CCCSEEEECCCCCBCSSS---SCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHH
T ss_pred HHHHhhcccCceEEeCch----hhCCEEEEEeCCCccccc---cCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHH
Confidence 9987754 5789999984 589999999999986431 2478999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhh-cccCCceeeEEECCc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKA-NHKTNVQFQILSNPE 242 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~-~~~~g~~~~l~~~Pe 242 (598)
+++.. +++++ +++.+.+|.++++||
T Consensus 137 ~~v~~------------------------------------------------------~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 137 DDFVK------------------------------------------------------PVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp HHTHH------------------------------------------------------HHHHTTTCCBTTTEEEEECCC
T ss_pred HHHHH------------------------------------------------------HHHHHcCCCcCCCeEEEECCC
Confidence 88765 22332 233456799999999
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
|+++|.+.+++.+|++|+.|++. ++++.++++|+.++. .+++++++++||++|+++|+|++++|+|+||++.+|
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~~-----~~~~~~~~ly~~~~~-~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~ 236 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVTK-----ACIEAGKRVYRTFVQ-GEMIETDARTAEMSKLMENTYRDVNIALANELTKIC 236 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESSH-----HHHHHHHHHHTTTCC-SCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCCH-----HHHHHHHHHHHHHhC-CcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887643 688999999999985 567789999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh------HH----HHHHHHHHHHhccc
Q psy11160 323 EATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE------VA----SYWQQLYESLFNTV 392 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~------~~----~~~~~~i~~~~~~~ 392 (598)
+++|+|++++++++++++|+ .+++||+||||||||||+++|.+.|++.| +. ++ +++.+.+...+..+
T Consensus 237 e~~GiD~~~v~~~~~~~~ri--~~l~pG~G~GG~C~pkD~~~L~~~a~~~~-~li~~~~~iN~~~~~~v~~~~~~~l~~~ 313 (431)
T 3ojo_A 237 NNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPENA-KLIQTGREINNSMPAYVVDTTKQIIKAL 313 (431)
T ss_dssp HHTTCCHHHHHHHHTTSTTC--CCCCCCSCCCCCCBCSCC---------CC-HHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHcCCCHHHHHHHHccCCCc--ccCCCCCCccccchhhhHHHHHHHHHHHh-HHHHHHHHHHHHhHHHHHHHHHHHhhhc
Confidence 99999999999999999987 57899999999999999999999999988 31 11 11112233334457
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHc-CCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYE-GAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~-G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+++||+||||||||||||+||||+++|++.|.++ |++|.+|||++..+ .++.++++++++
T Consensus 314 ~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~-------------------~~~~~~~~~~~~ 374 (431)
T 3ojo_A 314 SGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-------------------FVEHDMSHAVKD 374 (431)
T ss_dssp SCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT-------------------TBCSTTHHHHTT
T ss_pred CCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc-------------------cccCCHHHHHhC
Confidence 8999999999999999999999999999999999 99999999998642 134678999999
Q ss_pred CCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccch
Q psy11160 472 THAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVIDL 527 (598)
Q Consensus 472 adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~i 527 (598)
+|++||+|+|++|+++||+.+ +.|+.| +|||+||+++. ...|+.|.++|+.
T Consensus 375 ad~vvi~t~~~~f~~~d~~~~-~~~~~~-~i~D~r~~~~~---~~~~~~y~~ig~~ 425 (431)
T 3ojo_A 375 ASLVLILSDHSEFKNLSDSHF-DKMKHK-VIFDTKNVVKS---SFEDVLYYNYGNI 425 (431)
T ss_dssp CSEEEECSCCGGGTSCCGGGG-TTCSSC-EEEESSCCCCS---CCSSSEEEETTTG
T ss_pred CCEEEEecCCHHHhccCHHHH-HhCCCC-EEEECCCCCCc---hhcCeEEEeeCch
Confidence 999999999999999999988 667655 99999999975 4589999999976
No 4
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=3.2e-76 Score=645.97 Aligned_cols=420 Identities=25% Similarity=0.356 Sum_probs=363.6
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-Cc-eEEEEeCCHH----HHHHHHcCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NI-QVTVVDKSEE----RIRQWNSNKLP 77 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~v~~~d~~~~----~~~~~~~~~~~ 77 (598)
++|||+|||+||||++||..|++ . || +|++||++++ +++.+++|..+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~---------------------------~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~ 69 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFAD---------------------------APCFEKVLGFQRNSKSSGYKIEMLNRGESP 69 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHH---------------------------STTCCEEEEECCCCTTTTTHHHHHTTTCCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHH---------------------------hCCCCeEEEEECChhHhHHHHHHHHhcCCC
Confidence 46899999999999999999999 8 99 9999999999 99999999999
Q ss_pred C--CCCChHHHHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 78 I--YEPGLDEVVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 78 ~--~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
+ +||++++++.+.. .+++++|++ .+++++||+||+|||||.+.++ .+.+|+++++++.++|++.++++++||+
T Consensus 70 i~~~e~gl~~l~~~~~~~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~---~~~~dl~~v~~~~~~i~~~l~~g~iVV~ 145 (478)
T 3g79_A 70 LKGEEPGLEELIGKVVKAGKFECTPD-FSRISELDAVTLAIQTPFANPK---DLEPDFSALIDGIRNVGKYLKPGMLVVL 145 (478)
T ss_dssp SSCCGGGHHHHHHHHHHTTCEEEESC-GGGGGGCSEEEECCCCCCCSSC---CSSCCCHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ccccCCCHHHHHHhhcccCCeEEeCc-HHHHhcCCEEEEecCCchhccC---CccccHHHHHHHHHHHHhhcCCCcEEEE
Confidence 9 9999999887543 467999999 5689999999999999986543 1138999999999999999999999999
Q ss_pred ecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhh--cccCC
Q psy11160 155 KSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKA--NHKTN 232 (598)
Q Consensus 155 ~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~--~~~~g 232 (598)
+||++|||+++++. +++++ +++.+
T Consensus 146 ~STv~pgtt~~v~~------------------------------------------------------~ile~~~g~~~~ 171 (478)
T 3g79_A 146 ESTITPGTTEGMAK------------------------------------------------------QILEEESGLKAG 171 (478)
T ss_dssp CSCCCTTTTTTHHH------------------------------------------------------HHHHHHHCCCBT
T ss_pred eCCCChHHHHHHHH------------------------------------------------------HHHHHhcCCCcC
Confidence 99999999877764 23321 22235
Q ss_pred ceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHH
Q psy11160 233 VQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRI 312 (598)
Q Consensus 233 ~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~i 312 (598)
.+|.++++|||+++|.+.+++++|++|+.|+++ ++++.++++|+.+....++++++.++||++|+++|+|++++|
T Consensus 172 ~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~-----~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 172 EDFALAHAPERVMVGRLLKNIREHDRIVGGIDE-----ASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp TTBEEEECCCCCCTTSHHHHHHHSCEEEEESSH-----HHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CceeEEeCCccCCccchhhhhcCCcEEEEeCCH-----HHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999877754 577999999999932357888999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHcCCc--cccccccccCccccccchhhhHHHHHHHHHHcCCh--------hH-----
Q psy11160 313 SSINSLSAVCEATGADVSEVAKAVGLDS--RIGAKFLQASVGFGGSCFQKDILNLVYICECLNLP--------EV----- 377 (598)
Q Consensus 313 a~~nE~~~la~~~gid~~ev~~~l~~~~--ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~--------~~----- 377 (598)
+|+||++.+|+++|+|+++|++++++++ ||++++++||+||||+|||||+++|.+.|++.|++ .+
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~~~ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~ 326 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLAR 326 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSCCSSSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCchhhhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccchhHHHHHHH
Confidence 9999999999999999999999999999 88899999999999999999999999999999954 11
Q ss_pred --HH----HHHH-HHHHHhc---ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhh
Q psy11160 378 --AS----YWQQ-LYESLFN---TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLK 447 (598)
Q Consensus 378 --~~----~~~~-~i~~~~~---~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~ 447 (598)
++ ++.+ +.+.+.+ .++++||+||||||||||||+||||++.|++.|.++|++|.+|||++.. +.
T Consensus 327 ~iN~~~~~~~~~~i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~--~~---- 400 (478)
T 3g79_A 327 KVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN--YP---- 400 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC--BT----
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc--cc----
Confidence 11 1111 2222222 4689999999999999999999999999999999999999999999862 11
Q ss_pred cccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCC-CcEEEecCCCCChhhhhhccceeeeccc
Q psy11160 448 ELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMK-PAYIFDGRKILNHDALLDIGFNVHTVID 526 (598)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~-~~iI~D~r~i~d~~~~~~~G~~y~~v~~ 526 (598)
.+.++.+++++++++|++||+|+|++|+++||+.+.+.|++ +++|||+||++|++++++.||.|+++|+
T Consensus 401 ----------~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~~~~~~~~~~g~~y~~ig~ 470 (478)
T 3g79_A 401 ----------GVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNVIEPDEFIGKGFVYKGIGR 470 (478)
T ss_dssp ----------TBCEESCHHHHHTTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSCSCHHHHHTTTCEEEETTC
T ss_pred ----------CcceecCHHHHHhcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCCCCHHHHHhcCCEEEEecc
Confidence 23467899999999999999999999999999999998882 4599999999999999999999999997
Q ss_pred hhh
Q psy11160 527 LNE 529 (598)
Q Consensus 527 iN~ 529 (598)
...
T Consensus 471 ~~~ 473 (478)
T 3g79_A 471 EGH 473 (478)
T ss_dssp TTT
T ss_pred cCc
Confidence 643
No 5
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.3e-74 Score=628.78 Aligned_cols=421 Identities=34% Similarity=0.565 Sum_probs=362.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+||||+++|..|++ .|++|++||+++++++.++++..++++|++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~---------------------------~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~ 55 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE---------------------------LGANVRCIDTDRNKIEQLNSGTIPIYEPGLEK 55 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHTCSCCCSTTHHH
T ss_pred CEEEEECcCHHHHHHHHHHHh---------------------------cCCEEEEEECCHHHHHHHHcCCCcccCCCHHH
Confidence 799999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 86 VVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
++.+.. .+++++++|+++++++||+||+|||||.+.+ +.+|+++++++++.|.+.++++++||++||++|||++
T Consensus 56 ~l~~~~~~~~l~~t~d~~ea~~~aDvViiaVptp~~~~-----~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~ 130 (450)
T 3gg2_A 56 MIARNVKAGRLRFGTEIEQAVPEADIIFIAVGTPAGED-----GSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYR 130 (450)
T ss_dssp HHHHHHHTTSEEEESCHHHHGGGCSEEEECCCCCBCTT-----SSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHH
T ss_pred HHHhhcccCcEEEECCHHHHHhcCCEEEEEcCCCcccC-----CCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchH
Confidence 886543 4679999999999999999999999998654 4799999999999999999999999999999999998
Q ss_pred HHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCccc
Q psy11160 165 SIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFL 244 (598)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~ 244 (598)
++...+. +.... ...+.+|.++++|||+
T Consensus 131 ~l~~~l~---------------------------------------------------~~~~~-~~~~~d~~v~~~Pe~a 158 (450)
T 3gg2_A 131 LIRKAIQ---------------------------------------------------EELDK-REVLIDFDIASNPEFL 158 (450)
T ss_dssp HHHHHHH---------------------------------------------------HHHHH-TTCCCCEEEEECCCCC
T ss_pred HHHHHHH---------------------------------------------------Hhccc-cCcCcceeEEechhhh
Confidence 8765220 00110 1113578999999999
Q ss_pred CcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCC-ceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 245 SEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPR-KHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCE 323 (598)
Q Consensus 245 ~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~-~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~ 323 (598)
.+|.+.+++.+|++|++|+.++ ++.+.++++|+.+..+ .+++.++.++||++|+++|++++++++++||++.+|+
T Consensus 159 ~eG~~~~~~~~p~~ivvG~~~~----~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~ 234 (450)
T 3gg2_A 159 KEGNAIDDFMKPDRVVVGVDSD----RARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCE 234 (450)
T ss_dssp CTTSHHHHHHSCSCEEEEESSH----HHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEEEEcCCH----HHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998653 6889999999998742 3677899999999999999999999999999999999
Q ss_pred HcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh-H-------HH----HH-HHHHHHHhc
Q psy11160 324 ATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE-V-------AS----YW-QQLYESLFN 390 (598)
Q Consensus 324 ~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~-~-------~~----~~-~~~i~~~~~ 390 (598)
++|+|++++++++++++|+++++++||+||||+|||||+++|.+.|+++|++. + ++ ++ +.+.+.+..
T Consensus 235 ~~Gid~~~v~~~~~~~~rig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~~~l~~~~~~iN~~~~~~~~~~~~~~~~~ 314 (450)
T 3gg2_A 235 RVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYRMEVLEAVERVNEKQKSILFDKFSTYYKG 314 (450)
T ss_dssp HHTCCHHHHHHHHHTSTTTCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHTTT
T ss_pred HhCCCHHHHHHHHcCCCCCCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999861 1 11 11 112333334
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.++++||+||||||||||||+||||++.|++.|.++|++|.+|||++..+ ....+ + . .+.++.+++++++
T Consensus 315 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~-------~-~-~~~~~~~~~~~~~ 384 (450)
T 3gg2_A 315 NVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKE-AQKRL-------G-D-KVEYTTDMYDAVR 384 (450)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHH-------G-G-GSEECSSHHHHTT
T ss_pred cCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHH-HHHhc-------C-c-cceecCCHHHHhc
Confidence 57899999999999999999999999999999999999999999999643 22222 1 1 3577899999999
Q ss_pred CCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccch
Q psy11160 471 NTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVIDL 527 (598)
Q Consensus 471 ~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~i 527 (598)
++|++||+|+|++|+++||+.+.+.|+.| +|||+||+++++ ++.||.|+++|+.
T Consensus 385 ~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~--~~~g~~y~~ig~~ 438 (450)
T 3gg2_A 385 GAEALFHVTEWKEFRMPDWSALSQAMAAS-LVIDGRNVYELP--ADSDFTLLNIGNS 438 (450)
T ss_dssp TCSCEEECSCCGGGSSCCHHHHHHHSSSC-EEEESSCCCCCC------CEEEECC--
T ss_pred CCCEEEEccCCHHHhhcCHHHHHHhcCCC-EEEECCCCCChH--HhCCCEEEEeccc
Confidence 99999999999999999999999988876 899999999988 7899999999863
No 6
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=100.00 E-value=5.1e-72 Score=616.92 Aligned_cols=443 Identities=63% Similarity=1.019 Sum_probs=375.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+||||+++|..|++ ++.|++|++||+++++++.++++..++++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~-------------------------~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~ 63 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAH-------------------------KCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLD 63 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-------------------------HCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-------------------------cCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHH
Confidence 4799999999999999999999 223799999999999999999999999999999
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+++.+....++++++++.+++++||+||+|||||.+.++++.++.+|+++++++++.|++.++++++||++||++||+++
T Consensus 64 ~~~~~~~~~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~ 143 (481)
T 2o3j_A 64 EIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAE 143 (481)
T ss_dssp HHHHHHBTTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHH
T ss_pred HHHHHhhcCCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHH
Confidence 88876544578999999889999999999999998765544556899999999999999999999999999999999998
Q ss_pred HHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhh--cccCCceeeEEECCc
Q psy11160 165 SIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKA--NHKTNVQFQILSNPE 242 (598)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~--~~~~g~~~~l~~~Pe 242 (598)
++... +++ ....+.+|.++++||
T Consensus 144 ~l~~~-------------------------------------------------------l~~~~~~~~~~d~~v~~~Pe 168 (481)
T 2o3j_A 144 SIGCI-------------------------------------------------------LREAQKNNENLKFQVLSNPE 168 (481)
T ss_dssp HHHHH-------------------------------------------------------HHHHTC----CCEEEEECCC
T ss_pred HHHHH-------------------------------------------------------HHHhhCcCcCCceEEEeCcc
Confidence 76642 221 111245688999999
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
|+.+|.+.+++.+|+++++|+.+..+.+++++.++++|+.++...+++++++++||++|+++|++++++++++||+..+|
T Consensus 169 ~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la 248 (481)
T 2o3j_A 169 FLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVC 248 (481)
T ss_dssp CCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987554556888999999998732467788999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh----------HHHH----HHH-HHHH
Q psy11160 323 EATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE----------VASY----WQQ-LYES 387 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~----------~~~~----~~~-~i~~ 387 (598)
+++|+|+++++++++.++|+++.+++||+||||+|++||++++.+.|++.|++. +++. +.+ +++.
T Consensus 249 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~~~~~l~~~~~~~N~~~~~~~~~~~~~~ 328 (481)
T 2o3j_A 249 EATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAE 328 (481)
T ss_dssp HHHSCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHccCCCCCCCCCCCCCccCCccHHHHHHHHHHHHHHcCCCccchHHHHHHHHHHhhHHHHHHHHHHh
Confidence 999999999999999999999889999999999999999999999999999862 1111 111 2233
Q ss_pred HhcccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhh
Q psy11160 388 LFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYD 467 (598)
Q Consensus 388 ~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (598)
+.+.++++||+|||+||||||||+||||+++|++.|.++|++|.+|||++..++...+++.+.+.......+.++.++++
T Consensus 329 l~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (481)
T 2o3j_A 329 LFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYA 408 (481)
T ss_dssp TTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHH
T ss_pred hccccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHH
Confidence 33347899999999999999999999999999999999999999999999865443322111000000002467789999
Q ss_pred hccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccch
Q psy11160 468 TVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVIDL 527 (598)
Q Consensus 468 al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~i 527 (598)
+++++|++||+|+|++|+++||+.+.+.|+.|.+|||+||++|++++.+.||.|+++|+.
T Consensus 409 ~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~g~~~~~iG~~ 468 (481)
T 2o3j_A 409 AARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREIGFRTFAIGTS 468 (481)
T ss_dssp HHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSCSCHHHHHHHTCEEEETTSC
T ss_pred HHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCCCCHHHHHhcCcEEEEecCc
Confidence 999999999999999999999999999999888999999999999999999999999974
No 7
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=100.00 E-value=2e-70 Score=602.59 Aligned_cols=443 Identities=66% Similarity=1.076 Sum_probs=372.7
Q ss_pred CCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 2 VQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 2 ~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
|.++|||+|||+|+||+++|..|++ ++.|++|++||+++++++.++++..++++|
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~-------------------------~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~ 56 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAH-------------------------MCPEIRVTVVDVNESRINAWNSPTLPIYEP 56 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHH-------------------------HCTTSEEEEECSCHHHHHHHTSSSCSSCCT
T ss_pred CCCccEEEEECCCHHHHHHHHHHHh-------------------------cCCCCEEEEEECCHHHHHHHhCCCCCcCCC
Confidence 4456899999999999999999999 112899999999999999999999999999
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
++++++.+....++++++++.+++++||+||+|||+|...++...++.+|++++.++++.|.+.++++++||++||++||
T Consensus 57 ~l~~~~~~~~~~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g 136 (467)
T 2q3e_A 57 GLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVR 136 (467)
T ss_dssp THHHHHHHHBTTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTT
T ss_pred CHHHHHHHhhcCCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCch
Confidence 99888765444568999999889999999999999998643221124689999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
+++++.. .+++....+.++.+.++|
T Consensus 137 ~~~~l~~-------------------------------------------------------~l~~~~~~~~d~~V~~~P 161 (467)
T 2q3e_A 137 AAESIRR-------------------------------------------------------IFDANTKPNLNLQVLSNP 161 (467)
T ss_dssp HHHHHHH-------------------------------------------------------HHHHTCCTTCEEEEEECC
T ss_pred HHHHHHH-------------------------------------------------------HHHHhCCCCCCeEEEeCH
Confidence 9877654 232211124578899999
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAV 321 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~l 321 (598)
|+..+|...+++.+|+++++|+......+++.+.++++|+.+....++++++.++||++|+++|++++++++++||+..+
T Consensus 162 e~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l 241 (467)
T 2q3e_A 162 EFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISAL 241 (467)
T ss_dssp CCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984322234788999999999842357788999999999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHH---------------HHHHH
Q psy11160 322 CEATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYW---------------QQLYE 386 (598)
Q Consensus 322 a~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~---------------~~~i~ 386 (598)
|++.|+|++++.+++++++|+++.+++||+||||+||+||++++.+.|++.|++...+.+ +.+++
T Consensus 242 ~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 321 (467)
T 2q3e_A 242 CEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIID 321 (467)
T ss_dssp HHHHTCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcCHHHHHHHHcCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999999998888999999999999999999999999999987322211 11233
Q ss_pred HHhcccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhccc---c-cccCCCceEec
Q psy11160 387 SLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELD---P-ELLDHNAVSIL 462 (598)
Q Consensus 387 ~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~---~-~~~~~~~~~~~ 462 (598)
.+.+.++++||+||||||||||||+||||++.|++.|.++|++|.+|||++..+++...+.... + ... +.+.++
T Consensus 322 ~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 399 (467)
T 2q3e_A 322 SLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVS--RLVTIS 399 (467)
T ss_dssp HTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHH--HHEEEC
T ss_pred HhhcccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhcccccccccccc--Cceeec
Confidence 3344578999999999999999999999999999999999999999999998776544321000 0 000 135677
Q ss_pred CChhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCCh--hhhhhccceeeeccc
Q psy11160 463 DDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNH--DALLDIGFNVHTVID 526 (598)
Q Consensus 463 ~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~--~~~~~~G~~y~~v~~ 526 (598)
.+++++++++|++||+|+|++|+++||+.+...|+.|.+|||+||++|+ +++...||.|.++|+
T Consensus 400 ~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~~~g~~~~~ig~ 465 (467)
T 2q3e_A 400 KDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGK 465 (467)
T ss_dssp SSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCTTTTCHHHHHHHTCEEEETTS
T ss_pred CCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCcCCchHHHHHhcCcEEEEeCC
Confidence 8999999999999999999999999999999999988779999999998 899999999999985
No 8
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=100.00 E-value=1.9e-69 Score=595.43 Aligned_cols=435 Identities=34% Similarity=0.533 Sum_probs=366.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.|||+|||+||||+++|..|++ .|++|++||+++++++.++++..++++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~---------------------------~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~ 60 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD---------------------------IGHDVFCLDVDQAKIDILNNGGVPIHEPGLK 60 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHTTCCSSCCTTHH
T ss_pred CceEEEECcCHHHHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHCCCCCcCCCCHH
Confidence 4899999999999999999999 8999999999999999999999999999998
Q ss_pred HHHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+++.+.. .+++++++|+++++++||+||+|||||.+.+ +.+|+++++++++.|.+.++++++||.+||++||++
T Consensus 61 ~~l~~~~~~~~l~~ttd~~~a~~~aDvviiaVptp~~~~-----~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~ 135 (478)
T 2y0c_A 61 EVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDED-----GSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTA 135 (478)
T ss_dssp HHHHHHHHTTCEEEECCHHHHHHHCSEEEECCCCCBCTT-----SSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHH
T ss_pred HHHHHhcccCCEEEECCHHHHhhcCCEEEEEeCCCcccC-----CCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCch
Confidence 8776432 3579999999889999999999999998654 479999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEF 243 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~ 243 (598)
+.+...+. +.+..+ ..+.+|.++++|||
T Consensus 136 ~~l~~~l~---------------------------------------------------~~~~~g-~~~~~~~v~~~Pe~ 163 (478)
T 2y0c_A 136 ERVRAAVA---------------------------------------------------EELAKR-GGDQMFSVVSNPEF 163 (478)
T ss_dssp HHHHHHHH---------------------------------------------------HHHHHT-TCCCCEEEEECCCC
T ss_pred HHHHHHHH---------------------------------------------------HHhcCC-CCCccEEEEEChhh
Confidence 88765220 001110 00146889999999
Q ss_pred cCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccC-CceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 244 LSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIP-RKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 244 ~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~-~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
+.+|.+.+++..|+++++|+.+.....++.+.++++|+.+.. ..++.+++.++||++|+++|++++++++++||+..+|
T Consensus 164 ~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~la 243 (478)
T 2y0c_A 164 LKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLA 243 (478)
T ss_dssp CCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999986431011467889999999873 2467788999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh-HHH-----------HHHH-HHHHHh
Q psy11160 323 EATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE-VAS-----------YWQQ-LYESLF 389 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~-~~~-----------~~~~-~i~~~~ 389 (598)
+++|+|++++.++++.++|+++.++.||+|+||+|++||+.++.+.|++.|++. +.+ ++.+ +.+.+.
T Consensus 244 ~~~Gid~~~v~~~i~~~~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~~pl~~~v~~in~~~~~~~~~~~~~~~~ 323 (478)
T 2y0c_A 244 DRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFG 323 (478)
T ss_dssp HHTTCCHHHHHHHHHTSTTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHC
T ss_pred HHhCCCHHHHHHHHhcCCccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 999999999999999999998888899999999999999999999999999862 111 1111 233332
Q ss_pred cccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhc---ccccccCCCceEecCChh
Q psy11160 390 NTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKE---LDPELLDHNAVSILDDPY 466 (598)
Q Consensus 390 ~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 466 (598)
..++++||+||||||||||||+||||++.|++.|.++|++|.+|||++..+ ....+.. ..++.. + .+.++.+++
T Consensus 324 ~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 400 (478)
T 2y0c_A 324 EDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEE-ARRVIALDLADHPSWL-E-RLSFVDDEA 400 (478)
T ss_dssp SCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHH-HHHHHHHHTTTCHHHH-T-TEEECSSHH
T ss_pred ccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHH-HHHhhccccccccccc-c-ceeecCCHH
Confidence 357899999999999999999999999999999999999999999998543 2222200 000000 1 357788999
Q ss_pred hhccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccch
Q psy11160 467 DTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVIDL 527 (598)
Q Consensus 467 ~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~i 527 (598)
++++++|++||+|+|++|+++||+.+.+.|+.+ +|||+||+++++.++..||.|.++|+.
T Consensus 401 ~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~ig~~ 460 (478)
T 2y0c_A 401 QAARDADALVIVTEWKIFKSPDFVALGRLWKTP-VIFDGRNLYEPETMSEQGIEYHPIGRP 460 (478)
T ss_dssp HHTTTCSEEEECSCCGGGGSCCHHHHHTTCSSC-EEEESSCCSCHHHHHHTTCEEECSSSC
T ss_pred HHHhCCCEEEEecCChHhhccCHHHHHhhcCCC-EEEECCCCCCHHHHHhcCCEEEEECcc
Confidence 999999999999999999999999999888775 999999999999999999999999975
No 9
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=100.00 E-value=1.4e-66 Score=562.22 Aligned_cols=378 Identities=24% Similarity=0.373 Sum_probs=308.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+||||+++|..|++ |++|++||+++++++.++++..|++||+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~----------------------------G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~ 87 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ----------------------------NHEVVALDIVQAKVDMLNQKISPIVDKEIQ 87 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT----------------------------TSEEEEECSCHHHHHHHHTTCCSSCCHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc----------------------------CCeEEEEecCHHHhhHHhccCCccccccHH
Confidence 5899999999999999998876 799999999999999999999999999999
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+++.+. ..++++++|+.+++++||+||+|||+|.+.+ .+.+|+++++++++.|++ ++++++||++||++||+++
T Consensus 88 ~ll~~~-~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~----~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~ 161 (432)
T 3pid_A 88 EYLAEK-PLNFRATTDKHDAYRNADYVIIATPTDYDPK----TNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTR 161 (432)
T ss_dssp HHHHHS-CCCEEEESCHHHHHTTCSEEEECCCCEEETT----TTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHH
T ss_pred HHHhhc-cCCeEEEcCHHHHHhCCCEEEEeCCCccccc----cccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHH
Confidence 988652 3479999999999999999999999986532 236899999999999999 8999999999999999997
Q ss_pred HHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCccc
Q psy11160 165 SIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFL 244 (598)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~ 244 (598)
++.. .+.+ ..++++|||+
T Consensus 162 ~l~~-------------------------------------------------------~l~~-------~~v~~sPe~~ 179 (432)
T 3pid_A 162 DIKE-------------------------------------------------------RLGI-------DNVIFSPEFL 179 (432)
T ss_dssp HHHH-------------------------------------------------------HHTC-------CCEEECCCCC
T ss_pred HHHH-------------------------------------------------------HHhh-------ccEeecCccC
Confidence 7754 2222 2578999999
Q ss_pred CcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhc--ccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 245 SEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEH--WIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 245 ~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~--~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
++|.+.+++++|+||++|+++ ++.+.+.++|.. +....++.++++++||++|+++|+|++++|+|+||++.+|
T Consensus 180 ~~G~A~~~~l~p~rIvvG~~~-----~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 180 REGRALYDNLHPSRIVIGERS-----ARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CTTSHHHHHHSCSCEEESSCS-----HHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhhcccCCceEEecCCH-----HHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876 466778888876 3322357788999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCCh--h------HHHHHHH-HHHHHhcccC
Q psy11160 323 EATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLP--E------VASYWQQ-LYESLFNTVS 393 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~--~------~~~~~~~-~i~~~~~~~~ 393 (598)
+++|+|++++++++++++|||..|+.||+||||||||||+++|...+ .|++ . +++...+ +++.+.+ ..
T Consensus 255 e~~GiD~~~v~~~~~~dprig~~~~~pg~G~GG~C~pkD~~~L~~~~--~~~~~~li~~~~~~N~~~~~~v~~~i~~-~~ 331 (432)
T 3pid_A 255 ESQGLNSKQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANY--ESVPNNIIAAIVDANRTRKDFIADSILA-RK 331 (432)
T ss_dssp HHTTCCHHHHHHHHHTSTTTCSSSCCCCSCCCTTTHHHHHHHHHHHT--TTSCCSHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred HHcCCCHHHHHHHHccCCCCCcccCCCCCCCcccchhhhHHHHHHHh--cCCchhHHHHHHHHHHhhHHHHHHHHHh-hc
Confidence 99999999999999999999999999999999999999999997654 4554 1 1111111 2333332 25
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTH 473 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ad 473 (598)
+++|+||||||||||||+||||++.|++.|+++|++|.+|||++..+.+. +..+..|+++++++||
T Consensus 332 ~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~~~--------------~~~~~~~~~~~~~~aD 397 (432)
T 3pid_A 332 PKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDEFF--------------NSRVVRDLNAFKQEAD 397 (432)
T ss_dssp CSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSEET--------------TEEECCCHHHHHHHCS
T ss_pred CCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhhcC--------------CceEECCHHHHHhcCC
Confidence 89999999999999999999999999999999999999999999754211 3467899999999999
Q ss_pred EEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChh
Q psy11160 474 AIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHD 512 (598)
Q Consensus 474 alii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~ 512 (598)
+||+.+.+++|+++. + . +++|++|.++
T Consensus 398 ~iv~~~~~~~~~~~~-----~----~---~~tr~~~~~~ 424 (432)
T 3pid_A 398 VIISNRMAEELADVA-----D----K---VYTRDLFGND 424 (432)
T ss_dssp EEECSSCCGGGGGGG-----G----G---EECCCSSTTC
T ss_pred EEEECCCChHHHHHh-----h----c---cCCCCCCCCc
Confidence 999999999886533 1 1 3899999764
No 10
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=100.00 E-value=1.3e-63 Score=544.01 Aligned_cols=415 Identities=26% Similarity=0.405 Sum_probs=344.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|+||+++|..|++ .|++|++||+++++++.++++..++++|++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~---------------------------~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~ 53 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSA---------------------------RGHEVIGVDVSSTKIDLINQGKSPIVEPGLEA 53 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHhCCCCCcCCCCHHH
Confidence 589999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhhc-CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCC---CcEEEEecCCchH
Q psy11160 86 VVKKTR-DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATD---NKIVVEKSTVPVR 161 (598)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~ivv~~STv~~~ 161 (598)
++.+.. .+++++++++++++++||+||+|||+|...+ +.+|+++++++++.|.+.+++ +++||.+||++||
T Consensus 54 ~~~~~~~~g~l~~t~~~~~~~~~aDvviiaVptp~~~~-----~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g 128 (436)
T 1mv8_A 54 LLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKKN-----GDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPG 128 (436)
T ss_dssp HHHHHHHTTCEEEESCHHHHHHTCSEEEECCCCCBCTT-----SSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTT
T ss_pred HHHhhcccCceEEeCCHHHHhccCCEEEEEcCCCcccC-----CCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCC
Confidence 886543 3468999999889999999999999998644 479999999999999999998 9999999999999
Q ss_pred H-HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhh--cccCCceeeEE
Q psy11160 162 A-AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKA--NHKTNVQFQIL 238 (598)
Q Consensus 162 ~-~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~--~~~~g~~~~l~ 238 (598)
+ .+.+.. .+++ +...+.++.+.
T Consensus 129 ~t~~~l~~-------------------------------------------------------~l~~~~g~~~~~~~~v~ 153 (436)
T 1mv8_A 129 TVNNVVIP-------------------------------------------------------LIEDCSGKKAGVDFGVG 153 (436)
T ss_dssp HHHHTHHH-------------------------------------------------------HHHHHHSCCBTTTBEEE
T ss_pred chHHHHHH-------------------------------------------------------HHHHhcCcccCCcEEEE
Confidence 9 443332 2322 11123467899
Q ss_pred ECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 239 SNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSL 318 (598)
Q Consensus 239 ~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~ 318 (598)
++||+..+|...+++.+|+++++|+.++ ++.+.++++|+.++. ++..++.++||++|+++|++++++++++||+
T Consensus 154 ~~Pe~~~~G~~~~~~~~~~~iv~G~~~~----~~~~~~~~l~~~~~~--~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 154 TNPEFLRESTAIKDYDFPPMTVIGELDK----QTGDLLEEIYRELDA--PIIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEESSH----HHHHHHHHHHTTSSS--CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccccccccchhccCCCEEEEEcCCH----HHHHHHHHHHhccCC--CEEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988532 577889999999873 4556889999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHcCCcccc--ccccccCccccccchhhhHHHHHHHHHHcCChh--------HHHHH-HHHHHH
Q psy11160 319 SAVCEATGADVSEVAKAVGLDSRIG--AKFLQASVGFGGSCFQKDILNLVYICECLNLPE--------VASYW-QQLYES 387 (598)
Q Consensus 319 ~~la~~~gid~~ev~~~l~~~~ri~--~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~--------~~~~~-~~~i~~ 387 (598)
..+|+++|+|++++.++++.++|++ ++++.||+||||+|++||+.++.+.|+++|++. +++.. ..+++.
T Consensus 228 ~~l~~~~Gid~~~v~~~~~~~~r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~~pl~~~v~~in~~~~~~~~~~ 307 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVEHPMLGSLMRSNSNQVQKAFDL 307 (436)
T ss_dssp HHHHHHTTSCHHHHHHHHTTCTTTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCCCTTGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHhcCCCCCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCCCcHHHHHHHHHHhHhHHHHHHH
Confidence 9999999999999999999999887 778899999999999999999999999999851 12111 123444
Q ss_pred HhcccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhh---hhhhcccccccCCCceEecCC
Q psy11160 388 LFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQII---QDLKELDPELLDHNAVSILDD 464 (598)
Q Consensus 388 ~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 464 (598)
+.+. +++||+|||+||||||||+||||++.|++.|.++|++|.+|||++....+. ..|. ....+|....++.+
T Consensus 308 ~~~~-~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 383 (436)
T 1mv8_A 308 ITSH-DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYI---ESKIPHVSSLLVSD 383 (436)
T ss_dssp HTTS-SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHH---HHTSHHHHTTBCSC
T ss_pred HHHh-cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhc---ccccccccccccCC
Confidence 4433 789999999999999999999999999999999999999999985432100 1110 00000000034678
Q ss_pred hhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccc
Q psy11160 465 PYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVID 526 (598)
Q Consensus 465 ~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~ 526 (598)
++++++++|++||+|+|++|+++| .+.|+.+ +|||+||++++++ ||.|+++|+
T Consensus 384 ~~~~~~~~d~~vi~~~~~~~~~~~----~~~~~~~-~i~D~r~~~~~~~----g~~~~~ig~ 436 (436)
T 1mv8_A 384 LDEVVASSDVLVLGNGDELFVDLV----NKTPSGK-KLVDLVGFMPHTT----TAQAEGICW 436 (436)
T ss_dssp HHHHHHHCSEEEECSCCGGGHHHH----HSCCTTC-EEEESSSCCSSSC----CSSEEESCC
T ss_pred HHHHHhCCcEEEEeCCcHHHHhhh----HHhcCCC-EEEECCCCCCccc----CcEEEEecC
Confidence 999999999999999999999988 3456544 9999999999865 999999874
No 11
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=100.00 E-value=5e-59 Score=502.69 Aligned_cols=385 Identities=22% Similarity=0.319 Sum_probs=314.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|+||+++|..|++ |++|++||+++++++.++++..+++++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~----------------------------G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~ 52 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL----------------------------QNEVTIVDILPSKVDKINNGLSPIQDEYIEY 52 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT----------------------------TSEEEEECSCHHHHHHHHTTCCSSCCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC----------------------------CCEEEEEECCHHHHHHHHcCCCCcCCCCHHH
Confidence 589999999999999999886 7999999999999999999999999999988
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
++... ..++++++++.+++++||+||+|||+|.+.. .+.+|+++++++++.|.+ ++++++||.+||++||++++
T Consensus 53 ~~~~~-~~~l~~t~~~~~~~~~aDvviiavpt~~~~~----~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~ 126 (402)
T 1dlj_A 53 YLKSK-QLSIKATLDSKAAYKEAELVIIATPTNYNSR----INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITE 126 (402)
T ss_dssp HHHHS-CCCEEEESCHHHHHHHCSEEEECCCCCEETT----TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHH
T ss_pred HHHhc-cCcEEEeCCHHHHhcCCCEEEEecCCCcccC----CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHH
Confidence 87652 3468899999888999999999999986321 246899999999999999 89999999999999999877
Q ss_pred HHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccC
Q psy11160 166 IMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLS 245 (598)
Q Consensus 166 ~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~ 245 (598)
+.. .+. .+ .++++|||+.
T Consensus 127 l~~-------------------------------------------------------~~~------~~-~v~~~Pe~~~ 144 (402)
T 1dlj_A 127 MRQ-------------------------------------------------------KFQ------TD-RIIFSPEFLR 144 (402)
T ss_dssp HHH-------------------------------------------------------HTT------CS-CEEECCCCCC
T ss_pred HHH-------------------------------------------------------HhC------CC-eEEECCcccc
Confidence 654 111 11 5789999999
Q ss_pred cCchhhhcCCCCEEEEccCCCc--hhHHHHHHHHHHHhc-ccCCc-eEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 246 EGTAMTDLFNADRILIGGEETP--EGYAAIESLSWVYEH-WIPRK-HILTTNTWSSELSKLAANAFLAQRISSINSLSAV 321 (598)
Q Consensus 246 ~G~a~~~~~~p~rv~vGg~~~~--~~~~a~~~l~~ly~~-~~~~~-~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~l 321 (598)
+|.+.+++.+|+++++|+.+.. ...+..+.+.++|.. +.... +++.++.++||++|+++|++++++++++||+..+
T Consensus 145 ~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l 224 (402)
T 1dlj_A 145 ESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTY 224 (402)
T ss_dssp TTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987521 111345667788864 44212 4678899999999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChh------HHH----HHHHHHHHHhc-
Q psy11160 322 CEATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPE------VAS----YWQQLYESLFN- 390 (598)
Q Consensus 322 a~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~------~~~----~~~~~i~~~~~- 390 (598)
|+++|+|+.+++++++.++|++..++.||+||||+|||||+++|.+.|+....+. +++ ++.+.+...+.
T Consensus 225 ~~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~kD~~~l~~~a~~~~~~l~~~~~~~N~~~~~~~~~~~~~~~~~ 304 (402)
T 1dlj_A 225 AESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYSLPKDTKQLLANYNNIPQTLIEAIVSSNNVRKSYIAKQIINVLKE 304 (402)
T ss_dssp HHHTTCCHHHHHHHHHTSTTTCSSSCCCCSSCCSSHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHhccCCCCCcCCCCCCCccCCccHHhhHHHHHHHhcCCChHHHHHHHHHHHHhHHHHHHHHHHHhhh
Confidence 9999999999999999999999888999999999999999999999886322221 111 11122333332
Q ss_pred -ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhc
Q psy11160 391 -TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTV 469 (598)
Q Consensus 391 -~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 469 (598)
.++++||+||||||||||||+||||++.|++.|.++|++|.+|||++..+. . + . ...++.++++++
T Consensus 305 ~~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~--~-~-------~---~~~~~~~~~~~~ 371 (402)
T 1dlj_A 305 QESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE--S-E-------D---QSVLVNDLENFK 371 (402)
T ss_dssp SCCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC--T-T-------C---CSEECCCHHHHH
T ss_pred cCCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH--H-H-------c---CCeecCCHHHHH
Confidence 468899999999999999999999999999999999999999999876431 1 0 1 125678899999
Q ss_pred cCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCCh
Q psy11160 470 KNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNH 511 (598)
Q Consensus 470 ~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~ 511 (598)
+++|++|+.|+|++|+++. + -+.+|++|.+
T Consensus 372 ~~~d~~v~~~~h~~~~~~~-----~-------~~~~~~~~~~ 401 (402)
T 1dlj_A 372 KQANIIVTNRYDNELQDVK-----N-------KVYSRDIFGR 401 (402)
T ss_dssp HHCSEEECSSCCGGGGGGG-----G-------GEECCCCSSC
T ss_pred hCCcEEEEecCChHHHHHh-----h-------ccccccccCC
Confidence 9999999999999997743 1 1348888754
No 12
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.97 E-value=6.8e-30 Score=264.89 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=204.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|+||+|||+|.||.+||.+|.+ +||+|++||+++++++.+.+.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~---------------------------~G~~v~v~dr~~~~~~~l~~~---------- 45 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLK---------------------------AGYLLNVFDLVQSAVDGLVAA---------- 45 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHHT----------
T ss_pred cCEEEEeeehHHHHHHHHHHHh---------------------------CCCeEEEEcCCHHHHHHHHHc----------
Confidence 5689999999999999999999 899999999999999988742
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH---HHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR---MIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~ivv~~STv~~~ 161 (598)
+.+...++.+++++||+||+|+|++. .+++++. .+.+.++++++||++||+.|.
T Consensus 46 ---------Ga~~a~s~~e~~~~~dvv~~~l~~~~--------------~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~ 102 (300)
T 3obb_A 46 ---------GASAARSARDAVQGADVVISMLPASQ--------------HVEGLYLDDDGLLAHIAPGTLVLECSTIAPT 102 (300)
T ss_dssp ---------TCEECSSHHHHHTTCSEEEECCSCHH--------------HHHHHHHSSSSSTTSCCC-CEEEECSCCCHH
T ss_pred ---------CCEEcCCHHHHHhcCCceeecCCchH--------------HHHHHHhchhhhhhcCCCCCEEEECCCCCHH
Confidence 35678899999999999999997652 4666654 477788999999999999999
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
++++++.. +++ .| +.++++|
T Consensus 103 ~~~~~a~~-------------------------------------------------------~~~---~G--~~~lDaP 122 (300)
T 3obb_A 103 SARKIHAA-------------------------------------------------------ARE---RG--LAMLDAP 122 (300)
T ss_dssp HHHHHHHH-------------------------------------------------------HHT---TT--CEEEECC
T ss_pred HHHHHHHH-------------------------------------------------------HHH---cC--CEEEecC
Confidence 99888752 333 23 5789999
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAV 321 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~l 321 (598)
+++.+..+..+.+ .+|+||+. +++++++++|+.+++ ..+++|+.++|+.+|+++|.+.+..+..++|...+
T Consensus 123 VsGg~~~A~~G~L---~imvGG~~-----~~~~~~~p~l~~~g~-~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~l 193 (300)
T 3obb_A 123 VSGGTAGAAAGTL---TFMVGGDA-----EALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMAL 193 (300)
T ss_dssp EESCHHHHHHTCE---EEEEESCH-----HHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhCCE---EEEEeCCH-----HHHHHHHHHHHHhCC-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987766777766 48999975 689999999999984 57789999999999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHcCCcccccc--------------c--cccCccccccchhhhHHHHHHHHHHcCCh
Q psy11160 322 CEATGADVSEVAKAVGLDSRIGAK--------------F--LQASVGFGGSCFQKDILNLVYICECLNLP 375 (598)
Q Consensus 322 a~~~gid~~ev~~~l~~~~ri~~~--------------~--l~~~~gfgg~cl~KD~~~L~~~a~~~G~~ 375 (598)
+++.|+|++.+.++++.....++. . -++.++|....+.||+++..+.|++.|++
T Consensus 194 a~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~ 263 (300)
T 3obb_A 194 GVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS 263 (300)
T ss_dssp HHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999876422211 0 13567899999999999999999999987
No 13
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.97 E-value=1.6e-29 Score=261.83 Aligned_cols=253 Identities=16% Similarity=0.189 Sum_probs=198.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
.||+|||+|+||.+||.+|++ +||+|++||+++++++.+.+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~---------------------------~G~~V~v~dr~~~~~~~l~~------------ 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLE---------------------------AGYELVVWNRTASKAEPLTK------------ 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---------------------------TTCEEEEC-------CTTTT------------
T ss_pred CcEEEEecHHHHHHHHHHHHH---------------------------CCCeEEEEeCCHHHHHHHHH------------
Confidence 489999999999999999999 89999999999999876653
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH-HHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA-RMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.+.+...++.+++++||+||+|+|++. .+++++ ..+.+.++++.++|++||+.|.+++
T Consensus 47 -------~G~~~~~s~~e~~~~~dvvi~~l~~~~--------------~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~ 105 (297)
T 4gbj_A 47 -------LGATVVENAIDAITPGGIVFSVLADDA--------------AVEELFSMELVEKLGKDGVHVSMSTISPETSR 105 (297)
T ss_dssp -------TTCEECSSGGGGCCTTCEEEECCSSHH--------------HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHH
T ss_pred -------cCCeEeCCHHHHHhcCCceeeeccchh--------------hHHHHHHHHHHhhcCCCeEEEECCCCChHHHH
Confidence 235677889999999999999998753 344433 5688889999999999999999998
Q ss_pred HHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCccc
Q psy11160 165 SIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFL 244 (598)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~ 244 (598)
+++. .+.+ .| +.++++|+++
T Consensus 106 ~~~~-------------------------------------------------------~~~~---~g--~~~ldapVsG 125 (297)
T 4gbj_A 106 QLAQ-------------------------------------------------------VHEW---YG--AHYVGAPIFA 125 (297)
T ss_dssp HHHH-------------------------------------------------------HHHH---TT--CEEEECCEEC
T ss_pred HHHH-------------------------------------------------------HHHh---cC--CceecCCcCC
Confidence 8875 2333 23 5789999998
Q ss_pred CcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEec-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 245 SEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTT-NTWSSELSKLAANAFLAQRISSINSLSAVCE 323 (598)
Q Consensus 245 ~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~-~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~ 323 (598)
.+..+..+.+ .+|+||+. +++++++++|+.++. ..++++ .+++|+.+|+++|.+.+.+++.++|...+|+
T Consensus 126 g~~~a~~g~l---~im~gG~~-----~~~~~~~~~l~~~g~-~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~ 196 (297)
T 4gbj_A 126 RPEAVRAKVG---NICLSGNA-----GAKERIKPIVENFVK-GVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAE 196 (297)
T ss_dssp CHHHHHHTCC---EEEEEECH-----HHHHHHHHHHHTTCS-EEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cccccccccc---eeecccch-----hHHHHHHHHHHHhhC-CeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766766665 58899975 689999999999984 566777 5799999999999999999999999999999
Q ss_pred HcCCCHHHHHHHHcCCccccccc-------c--ccC-ccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 324 ATGADVSEVAKAVGLDSRIGAKF-------L--QAS-VGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 324 ~~gid~~ev~~~l~~~~ri~~~~-------l--~~~-~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
+.|+|+++++++++.....++.+ + ++. .||....+.||+++..+.|++.|++ .+.+.+.++.+.
T Consensus 197 ~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~ 271 (297)
T 4gbj_A 197 KNGISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASDVNAPMPFADIIRNRFIS 271 (297)
T ss_dssp HTTCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 99999999999999765433211 1 333 4789999999999999999999987 233334444333
No 14
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.97 E-value=2.9e-29 Score=259.55 Aligned_cols=255 Identities=18% Similarity=0.195 Sum_probs=203.3
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+.|||+|||+|+||.++|..|++ .||+|++||+++++++.+++.
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~~--------- 57 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTE---------------------------WPGGVTVYDIRIEAMTPLAEA--------- 57 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTT---------------------------STTCEEEECSSTTTSHHHHHT---------
T ss_pred CCCeEEEECcCHHHHHHHHHHHH---------------------------CCCeEEEEeCCHHHHHHHHHC---------
Confidence 35799999999999999999999 899999999999999888752
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+++++++++++++ ||+||+|||++. .++++++.+.+.++++++||+.||++|+++
T Consensus 58 ----------g~~~~~~~~~~~~-aDvvi~~vp~~~--------------~~~~v~~~l~~~l~~g~ivv~~st~~~~~~ 112 (296)
T 3qha_A 58 ----------GATLADSVADVAA-ADLIHITVLDDA--------------QVREVVGELAGHAKPGTVIAIHSTISDTTA 112 (296)
T ss_dssp ----------TCEECSSHHHHTT-SSEEEECCSSHH--------------HHHHHHHHHHTTCCTTCEEEECSCCCHHHH
T ss_pred ----------CCEEcCCHHHHHh-CCEEEEECCChH--------------HHHHHHHHHHHhcCCCCEEEEeCCCCHHHH
Confidence 3567889998888 999999998753 477788999999999999999999999999
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEF 243 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~ 243 (598)
+++... +.+ .| ..++++|.+
T Consensus 113 ~~~~~~-------------------------------------------------------~~~---~g--~~~~~~pv~ 132 (296)
T 3qha_A 113 VELARD-------------------------------------------------------LKA---RD--IHIVDAPVS 132 (296)
T ss_dssp HHHHHH-------------------------------------------------------HGG---GT--CEEEECCEE
T ss_pred HHHHHH-------------------------------------------------------HHH---cC--CEEEeCCCc
Confidence 877651 222 12 346677877
Q ss_pred cCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 244 LSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCE 323 (598)
Q Consensus 244 ~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~ 323 (598)
..+..+..+.. .+++||++ ++++.++++|+.++. .++++++.++|+.+|+++|.+.+.+++++||+..+|+
T Consensus 133 g~~~~a~~g~l---~~~~gg~~-----~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~ 203 (296)
T 3qha_A 133 GGAAAAARGEL---ATMVGADR-----EVYERIKPAFKHWAA-VVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAE 203 (296)
T ss_dssp SCHHHHHHTCE---EEEEECCH-----HHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCc---cEEecCCH-----HHHHHHHHHHHHHcC-CeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65443333332 57888864 688999999999974 5667888999999999999999999999999999999
Q ss_pred HcCCCHHHH------HHHHcCCccc-----cccccc-cCccccc-----cchhhhHHHHHHHHHHcCCh-hHHHHHHHHH
Q psy11160 324 ATGADVSEV------AKAVGLDSRI-----GAKFLQ-ASVGFGG-----SCFQKDILNLVYICECLNLP-EVASYWQQLY 385 (598)
Q Consensus 324 ~~gid~~ev------~~~l~~~~ri-----~~~~l~-~~~gfgg-----~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i 385 (598)
+.|+|++++ .+++...... +..++. +.+||++ .|++||++++.+.|++.|++ .+.+.+.+++
T Consensus 204 ~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~ 283 (296)
T 3qha_A 204 AAGLDLQALGRVVRHTDALTGGPGAIMVRDNMKDLEPDNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGL 283 (296)
T ss_dssp HTTCCHHHHHHHHHHHHHHHCCGGGGCCCSSCSCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HcCCCHHHHhhhcchHHHHhcCcccCHHhhchhhhhcCCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 999999999 9998864321 122222 4688988 99999999999999999987 3333344444
Q ss_pred HHH
Q psy11160 386 ESL 388 (598)
Q Consensus 386 ~~~ 388 (598)
+..
T Consensus 284 ~~~ 286 (296)
T 3qha_A 284 AAG 286 (296)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 15
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.96 E-value=1.2e-28 Score=257.82 Aligned_cols=254 Identities=16% Similarity=0.185 Sum_probs=205.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+|+||.++|..|++ .|++|++||+++++++.+.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~---------------------------~G~~V~~~dr~~~~~~~l~~~---------- 73 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCE---------------------------AGYALQVWNRTPARAASLAAL---------- 73 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHTT----------
T ss_pred CCEEEEECccHHHHHHHHHHHh---------------------------CCCeEEEEcCCHHHHHHHHHC----------
Confidence 4799999999999999999999 899999999999999988752
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH--HHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR--MIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~ivv~~STv~~~~ 162 (598)
++..++++.+++++||+||+|||++. .++.++. .+.+.++++++||+.||++|.+
T Consensus 74 ---------g~~~~~~~~e~~~~aDvVi~~vp~~~--------------~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~ 130 (320)
T 4dll_A 74 ---------GATIHEQARAAARDADIVVSMLENGA--------------VVQDVLFAQGVAAAMKPGSLFLDMASITPRE 130 (320)
T ss_dssp ---------TCEEESSHHHHHTTCSEEEECCSSHH--------------HHHHHHTTTCHHHHCCTTCEEEECSCCCHHH
T ss_pred ---------CCEeeCCHHHHHhcCCEEEEECCCHH--------------HHHHHHcchhHHhhCCCCCEEEecCCCCHHH
Confidence 35678899999999999999998653 4666666 7888899999999999999999
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
++++... +.+ .| ..++.+|.
T Consensus 131 ~~~~~~~-------------------------------------------------------~~~---~g--~~~~~~pv 150 (320)
T 4dll_A 131 ARDHAAR-------------------------------------------------------LGA---LG--IAHLDTPV 150 (320)
T ss_dssp HHHHHHH-------------------------------------------------------HHH---TT--CEEEECCE
T ss_pred HHHHHHH-------------------------------------------------------HHH---cC--CEEEeCCC
Confidence 9877641 222 12 35677887
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
+..+..+..+.. .+++||++ ++++.++++|+.+ . .++++++.++|+.+|+++|.+.+..+++++|+..+|
T Consensus 151 ~g~~~~a~~g~l---~i~~gg~~-----~~~~~~~~ll~~~-~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 220 (320)
T 4dll_A 151 SGGTVGAEQGTL---VIMAGGKP-----ADFERSLPLLKVF-G-RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFA 220 (320)
T ss_dssp ECHHHHHHHTCE---EEEEESCH-----HHHHHHHHHHHHH-E-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHhHHhcCCe---eEEeCCCH-----HHHHHHHHHHHhc-C-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765433333332 57889864 6889999999998 4 677788899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHHH
Q psy11160 323 EATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYESL 388 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~~ 388 (598)
++.|+|++++.++++.+...++ .++ ++.+||++.|++||++++.+.+++.|++ .+.+.+.++++.+
T Consensus 221 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a 296 (320)
T 4dll_A 221 TKGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIGFDAPITGLFEQLYAEG 296 (320)
T ss_dssp HHTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 9999999999999997652222 222 4568999999999999999999999987 3444444444443
No 16
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.96 E-value=1.5e-28 Score=255.86 Aligned_cols=255 Identities=13% Similarity=0.139 Sum_probs=205.0
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+|||+|||+|+||.+||..|++ .|++|++||+++++++.+.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~---------------------------~G~~V~~~dr~~~~~~~l~~~--------- 63 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLK---------------------------NGFKVTVWNRTLSKCDELVEH--------- 63 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSGGGGHHHHHT---------
T ss_pred cCCEEEEECccHHHHHHHHHHHH---------------------------CCCeEEEEeCCHHHHHHHHHC---------
Confidence 46899999999999999999999 899999999999999888742
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH---HHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA---RMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ivv~~STv~~ 160 (598)
++..++++.+++++||+||+|||+|. .+++++ +.+.+.++++++||+.||++|
T Consensus 64 ----------g~~~~~~~~~~~~~aDvvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~~vv~~st~~~ 119 (310)
T 3doj_A 64 ----------GASVCESPAEVIKKCKYTIAMLSDPC--------------AALSVVFDKGGVLEQICEGKGYIDMSTVDA 119 (310)
T ss_dssp ----------TCEECSSHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCH
T ss_pred ----------CCeEcCCHHHHHHhCCEEEEEcCCHH--------------HHHHHHhCchhhhhccCCCCEEEECCCCCH
Confidence 35678899999999999999998763 466666 778888999999999999999
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
++++++... +.+ .| ..++.+
T Consensus 120 ~~~~~~~~~-------------------------------------------------------~~~---~g--~~~v~~ 139 (310)
T 3doj_A 120 ETSLKINEA-------------------------------------------------------ITG---KG--GRFVEG 139 (310)
T ss_dssp HHHHHHHHH-------------------------------------------------------HHH---TT--CEEEEC
T ss_pred HHHHHHHHH-------------------------------------------------------HHH---cC--CEEEeC
Confidence 999777641 222 12 345678
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSA 320 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~ 320 (598)
|.+..+..+..+.. .+++||+. ++++.++++|+.++. .++++++.+.++.+|+++|.+.+.++++++|+..
T Consensus 140 pv~g~~~~a~~g~l---~i~~gg~~-----~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~ 210 (310)
T 3doj_A 140 PVSGSKKPAEDGQL---IILAAGDK-----ALFEESIPAFDVLGK-RSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLV 210 (310)
T ss_dssp CEECCHHHHHHTCE---EEEEEECH-----HHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhHHhcCCe---EEEEcCCH-----HHHHHHHHHHHHhCC-CEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87765444443333 57888864 688999999999973 5667788999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 321 VCEATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 321 la~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
+|++.|+|++++.++++.+...++ .++ ++.+||++.|+.||++.+.+.|++.|++ .+.+.+.++++.
T Consensus 211 l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 287 (310)
T 3doj_A 211 LADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKK 287 (310)
T ss_dssp HHHHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 999999999999999987543221 122 4578999999999999999999999986 334444444444
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.96 E-value=1.3e-27 Score=245.52 Aligned_cols=253 Identities=17% Similarity=0.160 Sum_probs=203.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|+||.++|..|++ .|++|++||+++++++.+.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~~----------- 43 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK---------------------------AGCSVTIWNRSPEKAEELAAL----------- 43 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSGGGGHHHHHT-----------
T ss_pred CEEEEEeecHHHHHHHHHHHH---------------------------CCCeEEEEcCCHHHHHHHHHC-----------
Confidence 699999999999999999999 899999999999999888753
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH---HHHHHHcCCCcEEEEecCCchHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA---RMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
++..++++.+++++||+||+|||++. .+++++ +.+.+.++++++||+.||+.|.+
T Consensus 44 --------g~~~~~~~~~~~~~aDvvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~ 101 (287)
T 3pef_A 44 --------GAERAATPCEVVESCPVTFAMLADPA--------------AAEEVCFGKHGVLEGIGEGRGYVDMSTVDPAT 101 (287)
T ss_dssp --------TCEECSSHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHH
T ss_pred --------CCeecCCHHHHHhcCCEEEEEcCCHH--------------HHHHHHcCcchHhhcCCCCCEEEeCCCCCHHH
Confidence 35678899999999999999998653 467777 88889999999999999999999
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
++++... +.+ .| ..++.+|.
T Consensus 102 ~~~~~~~-------------------------------------------------------~~~---~g--~~~~~~pv 121 (287)
T 3pef_A 102 SQRIGVA-------------------------------------------------------VVA---KG--GRFLEAPV 121 (287)
T ss_dssp HHHHHHH-------------------------------------------------------HHH---TT--CEEEECCE
T ss_pred HHHHHHH-------------------------------------------------------HHH---hC--CEEEECCC
Confidence 9777641 222 12 34566787
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
+..+..+..+.. .+++||+. ++++.++++|+.++. .++++++.+.++.+|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g~l---~~~~gg~~-----~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~ 192 (287)
T 3pef_A 122 SGSKKPAEDGTL---IILAAGDR-----NLYDEAMPGFEKMGK-KIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALG 192 (287)
T ss_dssp ECCHHHHHHTCE---EEEEEECH-----HHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCE---EEEEeCCH-----HHHHHHHHHHHHhCC-CeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765544433332 57788864 588999999999973 566678899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 323 EATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
++.|+|++++.++++.+.-.++ .++ ++.++|++.|+.||++.+.+.|++.|++ .+.+.+.++++.
T Consensus 193 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pef_A 193 EKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKG 267 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 9999999999999997542111 122 3578999999999999999999999986 233333344433
No 18
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.96 E-value=1.3e-27 Score=247.65 Aligned_cols=256 Identities=16% Similarity=0.130 Sum_probs=199.9
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++|||+|||+|+||.++|..|++ .|++|++||+++++++.+.+..
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~~g-------- 50 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLR---------------------------AGLSTWGADLNPQACANLLAEG-------- 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHTT--------
T ss_pred CCCeEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEECCHHHHHHHHHcC--------
Confidence 35799999999999999999999 8999999999999999887531
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH---HHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA---RMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ivv~~STv~~ 160 (598)
...+++++.+++++||+||+|||++. .++.++ +.+.+.++++++||+.||++|
T Consensus 51 ----------~~~~~~~~~e~~~~aDvvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~ivv~~st~~~ 106 (303)
T 3g0o_A 51 ----------ACGAAASAREFAGVVDALVILVVNAA--------------QVRQVLFGEDGVAHLMKPGSAVMVSSTISS 106 (303)
T ss_dssp ----------CSEEESSSTTTTTTCSEEEECCSSHH--------------HHHHHHC--CCCGGGSCTTCEEEECSCCCH
T ss_pred ----------CccccCCHHHHHhcCCEEEEECCCHH--------------HHHHHHhChhhHHhhCCCCCEEEecCCCCH
Confidence 11236788888999999999998752 356665 677888999999999999999
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
.+++++... +.+ .| ..++..
T Consensus 107 ~~~~~~~~~-------------------------------------------------------~~~---~g--~~~~~~ 126 (303)
T 3g0o_A 107 ADAQEIAAA-------------------------------------------------------LTA---LN--LNMLDA 126 (303)
T ss_dssp HHHHHHHHH-------------------------------------------------------HHT---TT--CEEEEC
T ss_pred HHHHHHHHH-------------------------------------------------------HHH---cC--CeEEeC
Confidence 998777641 222 12 345667
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecC-chhHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTN-TWSSELSKLAANAFLAQRISSINSLS 319 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~-~~~Ae~~Kl~~N~~~~~~ia~~nE~~ 319 (598)
|.+..+..+..+.. .+++||+. ++++.++++|+.++. .++++++ .++++.+|+++|++.+.++++++|+.
T Consensus 127 pv~g~~~~a~~g~l---~~~~gg~~-----~~~~~~~~ll~~~g~-~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~ 197 (303)
T 3g0o_A 127 PVSGGAVKAAQGEM---TVMASGSE-----AAFTRLKPVLDAVAS-NVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAM 197 (303)
T ss_dssp CEESCHHHHHTTCE---EEEEECCH-----HHHHHHHHHHHHHEE-EEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhhhhcCCe---EEEeCCCH-----HHHHHHHHHHHHHCC-CEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665443333332 57788854 688999999999974 4566776 89999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 320 AVCEATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 320 ~la~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
.+|++.|+|++++.++++.....++ .++ ++.++|++.|+.||++.+.+.|++.|++ .+.+.+.++++.
T Consensus 198 ~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~ 275 (303)
T 3g0o_A 198 ALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTS 275 (303)
T ss_dssp HHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 9999999999999999997542221 122 3567899999999999999999999987 233333344433
No 19
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.95 E-value=2.2e-29 Score=272.25 Aligned_cols=260 Identities=19% Similarity=0.293 Sum_probs=183.2
Q ss_pred CCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhccc-CCceeeEEECCcccCcCchhhhcCCCCEEEE
Q psy11160 183 RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHK-TNVQFQILSNPEFLSEGTAMTDLFNADRILI 261 (598)
Q Consensus 183 ~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~-~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~v 261 (598)
+.||++||+++++.|+++++++.+||.+||||||||+ ++.+..++ .| ...|..+...++|+++-.
T Consensus 101 ~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~---~v~~~i~e~~g-----------~~~~~d~~v~~~Pe~~~~ 166 (431)
T 3ojo_A 101 RSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMD---DFVKPVIENLG-----------FTIGEDIYLVHCPERVLP 166 (431)
T ss_dssp CBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHH---HTHHHHHHTTT-----------CCBTTTEEEEECCCCCCT
T ss_pred CCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHH---HHHHHHHHHcC-----------CCcCCCeEEEECCCcCCC
Confidence 7899999999999999999999999999999999997 33343222 11 123566788999998755
Q ss_pred ccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCcc
Q psy11160 262 GGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVGLDSR 341 (598)
Q Consensus 262 Gg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~~~r 341 (598)
|. +.+.... ..++..|+ +.+..+.+..+|....- ......++..+|++|+++|..+
T Consensus 167 G~--------A~~~~~~-------p~~Iv~G~--~~~~~~~~~~ly~~~~~-------~~~~~~~~~~AE~~Kl~~N~~~ 222 (431)
T 3ojo_A 167 GK--------ILEELVH-------NNRIIGGV--TKACIEAGKRVYRTFVQ-------GEMIETDARTAEMSKLMENTYR 222 (431)
T ss_dssp TS--------HHHHHHH-------SCEEEEES--SHHHHHHHHHHHTTTCC-------SCEEEEEHHHHHHHHHHHHHHH
T ss_pred cc--------hhhcccC-------CCEEEEeC--CHHHHHHHHHHHHHHhC-------CcEEeCCHHHHHHHHHHHHHHH
Confidence 43 3322221 13454443 23444555544432100 0011245667899999988654
Q ss_pred ccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHHHHHH
Q psy11160 342 IGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCR 421 (598)
Q Consensus 342 i~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~ 421 (598)
..+++| +|+++.+|+++|++. .++++.+.. +.||
T Consensus 223 ------a~~Ia~--------~nE~~~l~e~~GiD~-----~~v~~~~~~---~~ri------------------------ 256 (431)
T 3ojo_A 223 ------DVNIAL--------ANELTKICNNLNINV-----LDVIEMANK---HPRV------------------------ 256 (431)
T ss_dssp ------HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHTT---STTC------------------------
T ss_pred ------HHHHHH--------HHHHHHHHHHcCCCH-----HHHHHHHcc---CCCc------------------------
Confidence 456788 999999999999983 466666531 1222
Q ss_pred HHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcE
Q psy11160 422 TLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAY 501 (598)
Q Consensus 422 ~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~i 501 (598)
..+.|++ ++||| |++.|++.++..+. + .. . +
T Consensus 257 ---------~~l~pG~--------------G~GG~---C~pkD~~~L~~~a~---------~---~~--~---------l 287 (431)
T 3ojo_A 257 ---------NIHQPGP--------------GVGGH---CLAVDPYFIIAKDP---------E---NA--K---------L 287 (431)
T ss_dssp ---------CCCCCCS--------------CCCCC---CBCSCC---------------------CC--H---------H
T ss_pred ---------ccCCCCC--------------Ccccc---chhhhHHHHHHHHH---------H---Hh--H---------H
Confidence 1234543 37888 99999988766542 0 00 1 1
Q ss_pred EEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHHHhC
Q psy11160 502 IFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYE 581 (598)
Q Consensus 502 I~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l~~~ 581 (598)
.++++++|+.||.++++++.+.+ +.+++++|+||||||||||||+||||++.|++.|.++
T Consensus 288 -------------------i~~~~~iN~~~~~~v~~~~~~~l-~~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~ 347 (431)
T 3ojo_A 288 -------------------IQTGREINNSMPAYVVDTTKQII-KALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQE 347 (431)
T ss_dssp -------------------HHHHHHHHHTHHHHHHHHHHHHH-HHSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHS
T ss_pred -------------------HHHHHHHHHHhHHHHHHHHHHHh-hhcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhh
Confidence 25678999999999999999988 4588999999999999999999999999999999999
Q ss_pred -CCEEEEECCCCCCc
Q psy11160 582 -GAKLKIYDPKLMSR 595 (598)
Q Consensus 582 -g~~v~~~DP~~~~~ 595 (598)
|++|.+|||+++.+
T Consensus 348 ~g~~V~~~DP~~~~~ 362 (431)
T 3ojo_A 348 PDIEVCAYDPHVELD 362 (431)
T ss_dssp TTCEEEEECSSCCCT
T ss_pred cCCEEEEECCCcccc
Confidence 99999999999754
No 20
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.95 E-value=2.1e-27 Score=244.08 Aligned_cols=253 Identities=15% Similarity=0.164 Sum_probs=201.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
+||+|||+|+||.++|..|++ .||+|++||+++++++.+.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~~----------- 43 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR---------------------------AGFDVTVWNRNPAKCAPLVAL----------- 43 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH---------------------------HTCCEEEECSSGGGGHHHHHH-----------
T ss_pred CeEEEEccCHHHHHHHHHHHH---------------------------CCCeEEEEcCCHHHHHHHHHC-----------
Confidence 689999999999999999999 799999999999999887742
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH---HHHHHHcCCCcEEEEecCCchHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA---RMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
++..++++.+++++||+||+|||++. .+++++ +.+.+.++++++||+.||+.|.+
T Consensus 44 --------g~~~~~~~~~~~~~advvi~~v~~~~--------------~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~ 101 (287)
T 3pdu_A 44 --------GARQASSPAEVCAACDITIAMLADPA--------------AAREVCFGANGVLEGIGGGRGYIDMSTVDDET 101 (287)
T ss_dssp --------TCEECSCHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHH
T ss_pred --------CCeecCCHHHHHHcCCEEEEEcCCHH--------------HHHHHHcCchhhhhcccCCCEEEECCCCCHHH
Confidence 35677899999999999999998752 466666 77888889999999999999999
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
++++... +.+ .| ..++.+|.
T Consensus 102 ~~~~~~~-------------------------------------------------------~~~---~g--~~~~~~pv 121 (287)
T 3pdu_A 102 STAIGAA-------------------------------------------------------VTA---RG--GRFLEAPV 121 (287)
T ss_dssp HHHHHHH-------------------------------------------------------HHH---TT--CEEEECCE
T ss_pred HHHHHHH-------------------------------------------------------HHH---cC--CEEEECCc
Confidence 8777641 222 12 34566777
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
+..+..+..+.. .+++||+. ++++.++++|+.++. .++++++.+.++.+|+++|.+.+..+++++|+..+|
T Consensus 122 ~g~~~~a~~g~l---~~~~gg~~-----~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 192 (287)
T 3pdu_A 122 SGTKKPAEDGTL---IILAAGDQ-----SLFTDAGPAFAALGK-KCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALG 192 (287)
T ss_dssp ECCHHHHHHTCE---EEEEEECH-----HHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCE---EEEEeCCH-----HHHHHHHHHHHHhCC-CEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655433333332 47788864 678999999999973 456678899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 323 EATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
++.|+|++++.++++.+...++ .++ ++.+||++.|+.||+..+.+.+++.|++ .+.+.+.++++.
T Consensus 193 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pdu_A 193 RNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKR 267 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 9999999999999987542111 122 3578999999999999999999999986 233333344443
No 21
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.95 E-value=2.1e-26 Score=238.07 Aligned_cols=255 Identities=17% Similarity=0.180 Sum_probs=199.4
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++|||+|||+|+||.++|..|++ .|++|++||+++++++.+.+.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~~--------- 45 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLK---------------------------AGYLLNVFDLVQSAVDGLVAA--------- 45 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHHT---------
T ss_pred CCCEEEEEeecHHHHHHHHHHHh---------------------------CCCeEEEEcCCHHHHHHHHHC---------
Confidence 35799999999999999999999 899999999999999988752
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH---HHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR---MIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~ivv~~STv~~ 160 (598)
+++.++++.+++++||+||+|||++. .++.++. .+.+.++++++|+..||+.|
T Consensus 46 ----------g~~~~~~~~~~~~~aDvvi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vi~~st~~~ 101 (302)
T 2h78_A 46 ----------GASAARSARDAVQGADVVISMLPASQ--------------HVEGLYLDDDGLLAHIAPGTLVLECSTIAP 101 (302)
T ss_dssp ----------TCEECSSHHHHHTTCSEEEECCSCHH--------------HHHHHHHSSSCGGGSSCSSCEEEECSCCCH
T ss_pred ----------CCeEcCCHHHHHhCCCeEEEECCCHH--------------HHHHHHcCchhHHhcCCCCcEEEECCCCCH
Confidence 35677899999999999999998753 4677776 78888999999999999999
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
.+++++... +.+ .| ..++.+
T Consensus 102 ~~~~~l~~~-------------------------------------------------------~~~---~g--~~~~~~ 121 (302)
T 2h78_A 102 TSARKIHAA-------------------------------------------------------ARE---RG--LAMLDA 121 (302)
T ss_dssp HHHHHHHHH-------------------------------------------------------HHH---TT--CCEEEC
T ss_pred HHHHHHHHH-------------------------------------------------------HHH---cC--CEEEEE
Confidence 998777652 221 12 234556
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSA 320 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~ 320 (598)
|.+..+..+..... .+++||++ ++++.++++|+.++. .++++++.+.++.+|+++|++....+++++|+..
T Consensus 122 pv~~~~~~~~~g~l---~~~~~g~~-----~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~ 192 (302)
T 2h78_A 122 PVSGGTAGAAAGTL---TFMVGGDA-----EALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMA 192 (302)
T ss_dssp CEESCHHHHHHTCE---EEEEESCH-----HHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EccCChhhHhcCCc---eEEeCCCH-----HHHHHHHHHHHHhCC-CeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543211112222 46778753 678999999999973 5667888999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHcCCccccc--------------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHH
Q psy11160 321 VCEATGADVSEVAKAVGLDSRIGA--------------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQ 383 (598)
Q Consensus 321 la~~~gid~~ev~~~l~~~~ri~~--------------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~ 383 (598)
+|++.|+|++++.+++..+...++ .++ ++.+||++.|+.||+..+.+.+++.|++ .+.+.+.+
T Consensus 193 l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~ 272 (302)
T 2h78_A 193 LGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALS 272 (302)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 999999999999999997653221 122 3457899999999999999999999987 33333444
Q ss_pred HHHH
Q psy11160 384 LYES 387 (598)
Q Consensus 384 ~i~~ 387 (598)
+++.
T Consensus 273 ~~~~ 276 (302)
T 2h78_A 273 LYRL 276 (302)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 22
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.94 E-value=8.3e-28 Score=261.52 Aligned_cols=269 Identities=25% Similarity=0.325 Sum_probs=179.8
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEEE
Q psy11160 182 GRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRILI 261 (598)
Q Consensus 182 ~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~v 261 (598)
.+.|||+|++++++.|+++++++.+||.+||+||||+++ +.+.+.. . ..+..+...++|++.-.
T Consensus 100 ~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~----l~~~l~e-----------~-~~~~d~~v~~~Pe~a~e 163 (446)
T 4a7p_A 100 DGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDE----VERIIAE-----------V-APNSGAKVVSNPEFLRE 163 (446)
T ss_dssp TCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHH----HHHHHHH-----------H-STTSCCEEEECCCCCCT
T ss_pred cCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHH----HHHHHHH-----------h-CCCCCceEEeCcccccc
Confidence 568999999999999999999999999999999999973 3443321 1 11234556667776544
Q ss_pred ccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCcc
Q psy11160 262 GGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVGLDSR 341 (598)
Q Consensus 262 Gg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~~~r 341 (598)
|. +++. +.. .+.+.+|+. ..+..+.+..+|... . -++ .......++..+|+.|+++|..+
T Consensus 164 G~--------a~~d---~~~----p~~ivvG~~-~~~~~~~~~~ly~~~-~--~~~-~~~~~~~d~~~aE~~Kl~~N~~~ 223 (446)
T 4a7p_A 164 GA--------AIED---FKR----PDRVVVGTE-DEFARQVMREIYRPL-S--LNQ-SAPVLFTGRRTSELIKYAANAFL 223 (446)
T ss_dssp TS--------HHHH---HHS----CSCEEEECS-CHHHHHHHHHHHCSC-C--------CEEEECHHHHHHHHHHHHHHH
T ss_pred cc--------hhhh---ccC----CCEEEEeCC-cHHHHHHHHHHHHHH-h--cCC-CeEEEeCCHHHHHHHHHHHHHHH
Confidence 42 2222 211 234555532 122333333333210 0 000 00011235566789999988654
Q ss_pred ccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHHHHHH
Q psy11160 342 IGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCR 421 (598)
Q Consensus 342 i~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~ 421 (598)
...++| +|+++.+|+++|++. .++++.+.. +.||+ .
T Consensus 224 ------a~~ia~--------~nE~~~l~~~~GiD~-----~~v~~~~~~---~~rig---~------------------- 259 (446)
T 4a7p_A 224 ------AVKITF--------INEIADLCEQVGADV-----QEVSRGIGM---DNRIG---G------------------- 259 (446)
T ss_dssp ------HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHHT---STTC------------------------
T ss_pred ------HHHHHH--------HHHHHHHHHHcCCCH-----HHHHHHHhc---CCCCC---C-------------------
Confidence 345677 999999999999983 456655532 22221 0
Q ss_pred HHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcE
Q psy11160 422 TLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAY 501 (598)
Q Consensus 422 ~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~i 501 (598)
..+.|.+ ++|++ |++.|++.+++.|. +....+.+
T Consensus 260 ---------~~l~pg~--------------G~gg~---c~~KD~~~l~~~A~--------------------~~g~~~~l 293 (446)
T 4a7p_A 260 ---------KFLHAGP--------------GYGGS---CFPKDTLALMKTAA--------------------DNETPLRI 293 (446)
T ss_dssp ----------CCCCCS--------------CCCTT---THHHHHHHHHHHHH--------------------HTTCCCHH
T ss_pred ---------ccCCCCC--------------Ccchh---hHHHHHHHHHHHHH--------------------hcCCCCHH
Confidence 1234533 25677 88888877654331 00001111
Q ss_pred EEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHHHhC
Q psy11160 502 IFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYE 581 (598)
Q Consensus 502 I~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l~~~ 581 (598)
...++++|+.||+++++++.+.++++++++||+||||||||||||+||||++.|++.|.++
T Consensus 294 -------------------~~~~~~iN~~~~~~~~~~i~~~l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~ 354 (446)
T 4a7p_A 294 -------------------VEATVQVNDARKRAMGRKVIKAMGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDA 354 (446)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHC
Confidence 1467889999999999999999988899999999999999999999999999999999999
Q ss_pred CCEEEEECCCCCCc
Q psy11160 582 GAKLKIYDPKLMSR 595 (598)
Q Consensus 582 g~~v~~~DP~~~~~ 595 (598)
|++|.+|||+++++
T Consensus 355 g~~v~~~DP~~~~~ 368 (446)
T 4a7p_A 355 GATVKAYDPEGVEQ 368 (446)
T ss_dssp SCEEEEECSSCHHH
T ss_pred CCEEEEECCCCCHh
Confidence 99999999999643
No 23
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.94 E-value=8.6e-26 Score=235.86 Aligned_cols=242 Identities=11% Similarity=0.064 Sum_probs=180.7
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-ceEEEEeCCH-------HHHHHHHcCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-IQVTVVDKSE-------ERIRQWNSNK 75 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~v~~~d~~~-------~~~~~~~~~~ 75 (598)
++|||+|||+|+||.++|..|++ .| ++|++||+++ +.++.+.+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~---------------------------~G~~~V~~~dr~~~~~~~~~~~~~~~~~-- 73 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGG---------------------------RNAARLAAYDLRFNDPAASGALRARAAE-- 73 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT---------------------------TTCSEEEEECGGGGCTTTHHHHHHHHHH--
T ss_pred cCCeEEEECccHHHHHHHHHHHH---------------------------cCCCeEEEEeCCCccccchHHHHHHHHH--
Confidence 45799999999999999999999 89 9999999997 44444432
Q ss_pred CCCCCCChHHHHhhhcCCceEEec-CHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 76 LPIYEPGLDEVVKKTRDVNLFFST-DIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 76 ~~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
.+. ++ ++.+++++||+||+|||++. ..+.++.+.+.++++++||+
T Consensus 74 -----------------~g~--~~~s~~e~~~~aDvVi~avp~~~---------------~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 74 -----------------LGV--EPLDDVAGIACADVVLSLVVGAA---------------TKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp -----------------TTC--EEESSGGGGGGCSEEEECCCGGG---------------HHHHHHHHGGGCCTTCEEEE
T ss_pred -----------------CCC--CCCCHHHHHhcCCEEEEecCCHH---------------HHHHHHHHHhhcCCCCEEEE
Confidence 123 44 77788999999999998763 23345788899999999999
Q ss_pred ecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCce
Q psy11160 155 KSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQ 234 (598)
Q Consensus 155 ~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~ 234 (598)
.||++|++++++... +.+ .|
T Consensus 120 ~st~~p~~~~~~~~~-------------------------------------------------------l~~---~g-- 139 (317)
T 4ezb_A 120 LNSVGPDTKALAAGA-------------------------------------------------------IAT---GK-- 139 (317)
T ss_dssp CCSCCHHHHHHHHHH-------------------------------------------------------HHT---SS--
T ss_pred CCCCCHHHHHHHHHH-------------------------------------------------------HHH---cC--
Confidence 999999999877652 222 12
Q ss_pred eeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecC-chhHHHHHHHHHHHHHHHHH
Q psy11160 235 FQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTN-TWSSELSKLAANAFLAQRIS 313 (598)
Q Consensus 235 ~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~-~~~Ae~~Kl~~N~~~~~~ia 313 (598)
..++++|.+..++ +..+. + .+++||++ . +.++++|+.++. .++++++ +++|+.+|+++|++.+.+++
T Consensus 140 ~~~~d~pv~g~~~-a~~g~--l-~i~vgg~~------~-~~~~~ll~~~g~-~v~~~g~~~g~a~~~Kl~~N~~~~~~~~ 207 (317)
T 4ezb_A 140 GSFVEGAVMARVP-PYAEK--V-PILVAGRR------A-VEVAERLNALGM-NLEAVGETPGQASSLKMIRSVMIKGVEA 207 (317)
T ss_dssp CEEEEEEECSCST-TTGGG--S-EEEEESTT------H-HHHHHHHHTTTC-EEEEEESSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeEEeccCCCCch-hhcCC--E-EEEEeCCh------H-HHHHHHHHHhCC-CeEEeCCCcCHHHHHHHHHHHHHHHHHH
Confidence 2344555554221 22222 2 47889875 2 778999999974 5666776 89999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHcCCc-cccc-----ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHH
Q psy11160 314 SINSLSAVCEATGADVSEVAKAVGLDS-RIGA-----KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQL 384 (598)
Q Consensus 314 ~~nE~~~la~~~gid~~ev~~~l~~~~-ri~~-----~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~ 384 (598)
++||+..+|++.|+|+ ++++.+..+. +..+ .++ ++.+||+ ++||++++.+.+++.|++ .+.+.+.++
T Consensus 208 ~~~E~~~la~~~Gid~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~~pl~~~~~~~ 283 (317)
T 4ezb_A 208 LLIEALSSAERAGVTE-RILDSVQETFPGLDWRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLNAPMSRAACET 283 (317)
T ss_dssp HHHHHHHHHHHTTCHH-HHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCH-HHHHHHHhcCccccHHHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 9999999999999999 6888777543 2111 122 2345554 699999999999999987 344444444
No 24
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.93 E-value=2.6e-27 Score=259.26 Aligned_cols=271 Identities=18% Similarity=0.246 Sum_probs=182.5
Q ss_pred CCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEEEccC
Q psy11160 185 ADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRILIGGE 264 (598)
Q Consensus 185 ~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~ 264 (598)
+|++|++++++.|+++++++.+||.+||+|||||++ +.++.++... ....|..+....+|+++..|.
T Consensus 121 ~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~---v~~~ile~~~---------g~~~~~d~~v~~~Pe~~~~G~- 187 (478)
T 3g79_A 121 PDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEG---MAKQILEEES---------GLKAGEDFALAHAPERVMVGR- 187 (478)
T ss_dssp CCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTT---HHHHHHHHHH---------CCCBTTTBEEEECCCCCCTTS-
T ss_pred ccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHH---HHHHHHHHhc---------CCCcCCceeEEeCCccCCccc-
Confidence 999999999999999999999999999999999983 3333221100 112345667789999875553
Q ss_pred CCchhHHHHHHHHHHHhcccCCceEEec-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCcccc
Q psy11160 265 ETPEGYAAIESLSWVYEHWIPRKHILTT-NTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVGLDSRIG 343 (598)
Q Consensus 265 ~~~~~~~a~~~l~~ly~~~~~~~~v~~~-~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~~~ri~ 343 (598)
+.+... . ..++..| +...+ +.+..+|..... . ......++..+|++|+++|..+
T Consensus 188 -------a~~~~~---~----~~~Iv~G~~~~~~---~~~~~ly~~~~~---~---~~~~~~~~~~aE~~Kl~~N~~~-- 242 (478)
T 3g79_A 188 -------LLKNIR---E----HDRIVGGIDEAST---KRAVELYSPVLT---V---GQVIPMSATAAEVTKTAENTFR-- 242 (478)
T ss_dssp -------HHHHHH---H----SCEEEEESSHHHH---HHHHHHHGGGCS---S---CCEEEEEHHHHHHHHHHHHHHH--
T ss_pred -------hhhhhc---C----CcEEEEeCCHHHH---HHHHHHHhhhcc---C---CeEEeCCHHHHHHHHHHHHHHH--
Confidence 332222 1 1345444 33433 333333332100 0 0111234566899999988654
Q ss_pred ccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCC--eEEEEeccccCCCCcccCChHHHHHH
Q psy11160 344 AKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDK--HIAILGFAFKKNTGDTRESPAIHVCR 421 (598)
Q Consensus 344 ~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~--~V~ilGlafK~~t~D~R~Sp~l~li~ 421 (598)
..+++| +|+++.+|+++|++. .++++.+..+ . ||
T Consensus 243 ----a~~Ia~--------~nE~~~l~e~~GiD~-----~~v~~~~~~~---~~~ri------------------------ 278 (478)
T 3g79_A 243 ----DLQIAA--------INQLALYCEAMGINV-----YDVRTGVDSL---KGEGI------------------------ 278 (478)
T ss_dssp ----HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHHTS---CCSSS------------------------
T ss_pred ----HHHHHH--------HHHHHHHHHHcCCCH-----HHHHHHHCCC---chhhh------------------------
Confidence 456788 999999999999983 4666655321 1 11
Q ss_pred HHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcE
Q psy11160 422 TLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAY 501 (598)
Q Consensus 422 ~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~i 501 (598)
| ...|.|+++ +|++ |++.|++.+++.|.-+=+.-++|+| .+.+
T Consensus 279 -----~--~~~~~PG~G--------------~GG~---c~~KD~~~l~~~a~~~g~~~~~~~~-------------~~~l 321 (478)
T 3g79_A 279 -----T--RAVLWPGAG--------------VGGH---CLTKDTYHLERGVKIGRGELDYPEG-------------ADSI 321 (478)
T ss_dssp -----C--CCCCCCCSC--------------CCSS---HHHHHHHHHHHHHTTSSCCCCCCSS-------------CCCH
T ss_pred -----c--cccCCCCCC--------------cchh---hHHHHHHHHHHHHHHcCCCcccccc-------------hhHH
Confidence 1 123556542 6777 8888888776544200000000000 0101
Q ss_pred EEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhc---CCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHH
Q psy11160 502 IFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLF---NTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTL 578 (598)
Q Consensus 502 I~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~---~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l 578 (598)
.++++++|+.||+++++++.+.+. ++++++||+||||||||||||+||||++.|++.|
T Consensus 322 -------------------i~~~~~iN~~~~~~~~~~i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L 382 (478)
T 3g79_A 322 -------------------YVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLC 382 (478)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHH
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHH
Confidence 256789999999999999999884 3688999999999999999999999999999999
Q ss_pred HhCCCEEEEECCCCC
Q psy11160 579 LYEGAKLKIYDPKLM 593 (598)
Q Consensus 579 ~~~g~~v~~~DP~~~ 593 (598)
.++|++|.+|||+++
T Consensus 383 ~~~g~~V~~~DP~~~ 397 (478)
T 3g79_A 383 LKAGASVMVHDPYVV 397 (478)
T ss_dssp HHHTCEEEEECSSCC
T ss_pred HHCCCEEEEECCCcc
Confidence 999999999999986
No 25
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.93 E-value=4.4e-25 Score=229.90 Aligned_cols=237 Identities=10% Similarity=0.076 Sum_probs=182.0
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCC--HHHHHHHHcCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKS--EERIRQWNSNKLPIYE 80 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~--~~~~~~~~~~~~~~~e 80 (598)
.+|||+|||+|+||.+||..|++ .|+ +|++||++ +++.+.+.+.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~---------------------------~G~~~V~~~dr~~~~~~~~~~~~~------ 69 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ---------------------------AGAIDMAAYDAASAESWRPRAEEL------ 69 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---------------------------HSCCEEEEECSSCHHHHHHHHHHT------
T ss_pred CCCEEEEECccHHHHHHHHHHHH---------------------------CCCCeEEEEcCCCCHHHHHHHHHC------
Confidence 36899999999999999999999 789 99999997 6777776641
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
++..++++.+++++||+||+|||++. ..++++.+.+.++++++||+.||+.|
T Consensus 70 -------------g~~~~~~~~e~~~~aDvVi~~vp~~~---------------~~~~~~~l~~~l~~~~ivvd~st~~~ 121 (312)
T 3qsg_A 70 -------------GVSCKASVAEVAGECDVIFSLVTAQA---------------ALEVAQQAGPHLCEGALYADFTSCSP 121 (312)
T ss_dssp -------------TCEECSCHHHHHHHCSEEEECSCTTT---------------HHHHHHHHGGGCCTTCEEEECCCCCH
T ss_pred -------------CCEEeCCHHHHHhcCCEEEEecCchh---------------HHHHHHhhHhhcCCCCEEEEcCCCCH
Confidence 35677888889999999999998763 23456888899999999999999999
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
++++++... +.+.. .| ..++++
T Consensus 122 ~~~~~~~~~-------------------------------------------------------~~~~~-~g--~~~vd~ 143 (312)
T 3qsg_A 122 AVKRAIGDV-------------------------------------------------------ISRHR-PS--AQYAAV 143 (312)
T ss_dssp HHHHHHHHH-------------------------------------------------------HHHHC-TT--CEEEEE
T ss_pred HHHHHHHHH-------------------------------------------------------HHhhc-CC--CeEEec
Confidence 999877652 11100 12 234556
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecC-chhHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTN-TWSSELSKLAANAFLAQRISSINSLS 319 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~-~~~Ae~~Kl~~N~~~~~~ia~~nE~~ 319 (598)
|.+..+..+ .+.. .+++||++ . +.++++|+.++. .++++++ +++|+.+|+++|++.+.++++++|+.
T Consensus 144 pv~g~~~~~-~g~l---~i~vgg~~------~-~~~~~ll~~~g~-~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~ 211 (312)
T 3qsg_A 144 AVMSAVKPH-GHRV---PLVVDGDG------A-RRFQAAFTLYGC-RIEVLDGEVGGAALLKMCRSAVLKGLEALFLEAL 211 (312)
T ss_dssp EECSCSTTT-GGGS---EEEEESTT------H-HHHHHHHHTTTC-EEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCchhh-cCCE---EEEecCCh------H-HHHHHHHHHhCC-CeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665533222 2222 58889875 3 778999999974 4566776 89999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHcCCcc------cccccc--ccCccccccchhhhHHHHHHHHHHcCCh
Q psy11160 320 AVCEATGADVSEVAKAVGLDSR------IGAKFL--QASVGFGGSCFQKDILNLVYICECLNLP 375 (598)
Q Consensus 320 ~la~~~gid~~ev~~~l~~~~r------i~~~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~ 375 (598)
.+|++.|+|. ++++.+..+.. ++..++ ++.+||. +.||++++.+.+++.|++
T Consensus 212 ~la~~~Gld~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~ 271 (312)
T 3qsg_A 212 AAAEKMGLAD-RVLASLDASFPEHHLRDLALYLVERNLEHADR---RAHELGEVAATLCSVGVE 271 (312)
T ss_dssp HHHHTTTCHH-HHHHHHHHHSGGGTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCH-HHHHHHHhcCCchhHHHhhhHhhcCCCCcccc---hHHHHHHHHHHHHHcCCC
Confidence 9999999999 79998876531 111222 2345553 489999999999999986
No 26
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.92 E-value=2.1e-26 Score=251.36 Aligned_cols=273 Identities=21% Similarity=0.279 Sum_probs=182.6
Q ss_pred cCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEE
Q psy11160 181 QGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRIL 260 (598)
Q Consensus 181 ~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~ 260 (598)
.++.+|+++++++++.|+++++++.+||.+||+||||++.+++.+++.. . .+ ..+..+...++|+++-
T Consensus 92 ~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~---~--------~~-~~~~d~~v~~~Pe~a~ 159 (450)
T 3gg2_A 92 EDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEEL---D--------KR-EVLIDFDIASNPEFLK 159 (450)
T ss_dssp TTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHH---H--------HT-TCCCCEEEEECCCCCC
T ss_pred cCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhc---c--------cc-CcCcceeEEechhhhc
Confidence 4568999999999999999999999999999999999998877666521 0 00 0123455566777654
Q ss_pred EccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCc
Q psy11160 261 IGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVGLDS 340 (598)
Q Consensus 261 vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~~~ 340 (598)
.|. +.. .+.. ...+.+|+. +.+..+.+..+|....- +. ......++..+|++|+++|..
T Consensus 160 eG~--------~~~---~~~~----p~~ivvG~~-~~~~~~~~~~l~~~~~~---~~--~~~~~~d~~~aE~~Kl~~N~~ 218 (450)
T 3gg2_A 160 EGN--------AID---DFMK----PDRVVVGVD-SDRARELITSLYKPMLL---NN--FRVLFMDIASAEMTKYAANAM 218 (450)
T ss_dssp TTS--------HHH---HHHS----CSCEEEEES-SHHHHHHHHHHHTTTCC---SC--CCEEEECHHHHHHHHHHHHHH
T ss_pred ccc--------hhh---hccC----CCEEEEEcC-CHHHHHHHHHHHHHHhc---CC--CeEEecCHHHHHHHHHHHHHH
Confidence 332 222 1211 234544421 22334444433332100 00 000123445678888888765
Q ss_pred cccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHHHHH
Q psy11160 341 RIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVC 420 (598)
Q Consensus 341 ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li 420 (598)
+ ...++| +|+++.+|+++|++. .++++.+.. +.|| |.
T Consensus 219 ~------a~~ia~--------~nE~~~l~~~~Gid~-----~~v~~~~~~---~~ri---g~------------------ 255 (450)
T 3gg2_A 219 L------ATRISF--------MNDVANLCERVGADV-----SMVRLGIGS---DSRI---GS------------------ 255 (450)
T ss_dssp H------HHHHHH--------HHHHHHHHHHHTCCH-----HHHHHHHHT---STTT---CS------------------
T ss_pred H------HHHHHH--------HHHHHHHHHHhCCCH-----HHHHHHHcC---CCCC---Cc------------------
Confidence 4 334567 999999999999983 455555432 1121 10
Q ss_pred HHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCCCc
Q psy11160 421 RTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPA 500 (598)
Q Consensus 421 ~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~ 500 (598)
..|.|++ ++|++ |++.|++.+++.|. +....+.
T Consensus 256 ----------~~~~pg~--------------G~gg~---c~~KD~~~l~~~a~--------------------~~g~~~~ 288 (450)
T 3gg2_A 256 ----------KFLYPGC--------------GYGGS---CFPKDVKALIRTAE--------------------DNGYRME 288 (450)
T ss_dssp ----------SSCCCSS--------------CCCSS---HHHHHHHHHHHHHH--------------------HTTCCCH
T ss_pred ----------ccCCCCC--------------CCCcc---cHHhhHHHHHHHHH--------------------HcCCCcH
Confidence 1134432 25677 88888877654331 0000111
Q ss_pred EEEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHHHh
Q psy11160 501 YIFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLY 580 (598)
Q Consensus 501 iI~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l~~ 580 (598)
+ ...++++|+.||+++++++.+.++++++++||+||||||||||||+||||++.|++.|.+
T Consensus 289 l-------------------~~~~~~iN~~~~~~~~~~~~~~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~ 349 (450)
T 3gg2_A 289 V-------------------LEAVERVNEKQKSILFDKFSTYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLE 349 (450)
T ss_dssp H-------------------HHHHHHHHHHHTTHHHHHHHHHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHH
T ss_pred H-------------------HHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHH
Confidence 1 146788999999999999999998889999999999999999999999999999999999
Q ss_pred CCCEEEEECCCCCCc
Q psy11160 581 EGAKLKIYDPKLMSR 595 (598)
Q Consensus 581 ~g~~v~~~DP~~~~~ 595 (598)
+|++|.+|||+++++
T Consensus 350 ~g~~v~~~DP~~~~~ 364 (450)
T 3gg2_A 350 VGCRVRVYDPVAMKE 364 (450)
T ss_dssp TTCEEEEECSSCHHH
T ss_pred CCCEEEEECCCCcHH
Confidence 999999999999653
No 27
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.92 E-value=7.3e-26 Score=244.48 Aligned_cols=252 Identities=17% Similarity=0.224 Sum_probs=158.8
Q ss_pred CCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEEEc
Q psy11160 183 RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRILIG 262 (598)
Q Consensus 183 ~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vG 262 (598)
+.+|+++++++++.|++ ++++.+||.+||+|||||+ + +.+. + .. ....++|+++-+|
T Consensus 126 ~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~---~-l~~~------l---------~~---~~v~~sPe~~~~G 182 (432)
T 3pid_A 126 NYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTR---D-IKER------L---------GI---DNVIFSPEFLREG 182 (432)
T ss_dssp TEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHH---H-HHHH------H---------TC---CCEEECCCCCCTT
T ss_pred ccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHH---H-HHHH------H---------hh---ccEeecCccCCcc
Confidence 56899999999999999 9999999999999999997 2 3320 1 11 1345699986444
Q ss_pred cCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCccc
Q psy11160 263 GEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVGLDSRI 342 (598)
Q Consensus 263 g~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~~~ri 342 (598)
+ +... . +. .+++.+|+.. +.+..+...|....+. +.. -.-..++..+|++|+++|..+
T Consensus 183 ~--------A~~~---~---l~-p~rIvvG~~~--~~~~~~~~ll~~~~~~--~~~--~v~~~~~~~AE~~Kl~~N~~~- 240 (432)
T 3pid_A 183 R--------ALYD---N---LH-PSRIVIGERS--ARAERFADLLKEGAIK--QDI--PTLFTDSTEAEAIKLFANTYL- 240 (432)
T ss_dssp S--------HHHH---H---HS-CSCEEESSCS--HHHHHHHHHHHHHCSS--SSC--CEEECCHHHHHHHHHHHHHHH-
T ss_pred h--------hhhc---c---cC-CceEEecCCH--HHHHHHHHHHHhhhcc--CCC--eEEecCccHHHHHHHHHHHHH-
Confidence 3 3221 1 11 2456565432 1222222222210000 000 000135567899999988654
Q ss_pred cccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHHHHHHH
Q psy11160 343 GAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRT 422 (598)
Q Consensus 343 ~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~ 422 (598)
...++| +|+++.+|+++|++. +++++.+.. +.||+ . +
T Consensus 241 -----a~~Ia~--------~nEl~~lae~~GiD~-----~~v~~~~~~---dprig---~--~----------------- 277 (432)
T 3pid_A 241 -----ALRVAY--------FNELDSYAESQGLNS-----KQIIEGVCL---DPRIG---N--H----------------- 277 (432)
T ss_dssp -----HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHHT---STTTC---S--S-----------------
T ss_pred -----HHHHHH--------HHHHHHHHHHcCCCH-----HHHHHHHcc---CCCCC---c--c-----------------
Confidence 455778 999999999999983 466666531 22211 0 0
Q ss_pred HHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcEE
Q psy11160 423 LLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYI 502 (598)
Q Consensus 423 L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI 502 (598)
+..|++ ++||| |++.|++.++..+. ..+ +.+
T Consensus 278 ---------~~~pg~--------------G~GG~---C~pkD~~~L~~~~~------------~~~----------~~l- 308 (432)
T 3pid_A 278 ---------YNNPSF--------------GYGGY---CLPKDTKQLLANYE------------SVP----------NNI- 308 (432)
T ss_dssp ---------SCCCCS--------------CCCTT---THHHHHHHHHHHTT------------TSC----------CSH-
T ss_pred ---------cCCCCC--------------CCccc---chhhhHHHHHHHhc------------CCc----------hhH-
Confidence 011332 37888 99999987653220 000 111
Q ss_pred EecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHHHhCC
Q psy11160 503 FDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEG 582 (598)
Q Consensus 503 ~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l~~~g 582 (598)
.++++++|+.||+++++++.+. .+++|+||||||||||||+||||++.|++.|.++|
T Consensus 309 ------------------i~~~~~~N~~~~~~v~~~i~~~-----~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G 365 (432)
T 3pid_A 309 ------------------IAAIVDANRTRKDFIADSILAR-----KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKG 365 (432)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHT-----CCSSEEEECC-----------CHHHHHHHHHHHTT
T ss_pred ------------------HHHHHHHHHhhHHHHHHHHHhh-----cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcC
Confidence 1567899999999999999864 36899999999999999999999999999999999
Q ss_pred CEEEEECCCCCC
Q psy11160 583 AKLKIYDPKLMS 594 (598)
Q Consensus 583 ~~v~~~DP~~~~ 594 (598)
++|.+|||+++.
T Consensus 366 ~~V~~~DP~~~~ 377 (432)
T 3pid_A 366 IPVIIYEPVMQE 377 (432)
T ss_dssp CCEEEECTTCCS
T ss_pred CEEEEECCCCCh
Confidence 999999999974
No 28
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.92 E-value=1e-23 Score=218.89 Aligned_cols=237 Identities=10% Similarity=0.055 Sum_probs=182.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
++||+|||+|.||.+||..|++ .|++|++||+++++++.+.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~~---------- 51 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLK---------------------------QGKRVAIWNRSPGKAAALVAA---------- 51 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSHHHHHHHHHH----------
T ss_pred CCeEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHC----------
Confidence 5799999999999999999999 899999999999999887641
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH--HHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR--MIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+...++++.+++++||+||+|||++. .+++++. .+.. +.++++||+.||+.|.+
T Consensus 52 ---------g~~~~~~~~e~~~~aDvVi~~vp~~~--------------~~~~v~~~~~l~~-~~~g~ivid~st~~~~~ 107 (306)
T 3l6d_A 52 ---------GAHLCESVKAALSASPATIFVLLDNH--------------ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDE 107 (306)
T ss_dssp ---------TCEECSSHHHHHHHSSEEEECCSSHH--------------HHHHHHTSTTHHH-HTTTCEEEECCCCCTTH
T ss_pred ---------CCeecCCHHHHHhcCCEEEEEeCCHH--------------HHHHHhcccchhh-ccCCCEEEECCCCCHHH
Confidence 24567889999999999999998753 3555554 5544 57899999999999999
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
++++... +.+ .| ..++++|.
T Consensus 108 ~~~l~~~-------------------------------------------------------~~~---~g--~~~vdapv 127 (306)
T 3l6d_A 108 GLALQGL-------------------------------------------------------VNQ---AG--GHYVKGMI 127 (306)
T ss_dssp HHHHHHH-------------------------------------------------------HHH---TT--CEEEEEEE
T ss_pred HHHHHHH-------------------------------------------------------HHH---cC--CeEEeccc
Confidence 8777651 222 12 34566666
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEe--cC-chhHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILT--TN-TWSSELSKLAANAFLAQRISSINSLS 319 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~--~~-~~~Ae~~Kl~~N~~~~~~ia~~nE~~ 319 (598)
+..+........ .+++||+. +++++++++|+.++. .++++ ++ +++++++| .+.+.++++++|..
T Consensus 128 ~g~~~~~~~~~~---~i~~gg~~-----~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~ 194 (306)
T 3l6d_A 128 VAYPRNVGHRES---HSIHTGDR-----EAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH----AHAFAAMVTFFEAV 194 (306)
T ss_dssp ESCGGGTTCTTC---EEEEEECH-----HHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred ccCcccccCCce---EEEEcCCH-----HHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH----HHHHHHHHHHHHHH
Confidence 643322211111 57889864 689999999999964 56667 65 79999999 45567899999999
Q ss_pred HHHHHcCCCHHHHHHHHcCCc--cccc-------ccc--ccCcc-ccccchhhhHHHHHHHHHHcCCh
Q psy11160 320 AVCEATGADVSEVAKAVGLDS--RIGA-------KFL--QASVG-FGGSCFQKDILNLVYICECLNLP 375 (598)
Q Consensus 320 ~la~~~gid~~ev~~~l~~~~--ri~~-------~~l--~~~~g-fgg~cl~KD~~~L~~~a~~~G~~ 375 (598)
.++++.|+|++++.++++... ..++ .++ ++.++ |...|+.||++++.+.+++.|++
T Consensus 195 ~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~ 262 (306)
T 3l6d_A 195 GAGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVW 262 (306)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999998753 1111 122 34454 68899999999999999999987
No 29
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.91 E-value=4.8e-23 Score=218.39 Aligned_cols=242 Identities=14% Similarity=0.131 Sum_probs=188.0
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+.|||+|||+|.||.+||..|++ .|++|++||+++++++.+.+.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~---------------------------~G~~V~v~dr~~~~~~~l~~~--------- 64 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK---------------------------GGHECVVYDLNVNAVQALERE--------- 64 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHTT---------
T ss_pred cCCEEEEECchHHHHHHHHHHHh---------------------------CCCEEEEEeCCHHHHHHHHHC---------
Confidence 34799999999999999999999 899999999999999998753
Q ss_pred HHHHhhhcCCceEEecCHHHHhccC---cEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKA---QLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~a---dviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
++..+++++++++++ |+||+|||++ .++++++.+.+.++++++||+.||+.|
T Consensus 65 ----------g~~~~~s~~e~~~~a~~~DvVi~~vp~~---------------~v~~vl~~l~~~l~~g~iiId~st~~~ 119 (358)
T 4e21_A 65 ----------GIAGARSIEEFCAKLVKPRVVWLMVPAA---------------VVDSMLQRMTPLLAANDIVIDGGNSHY 119 (358)
T ss_dssp ----------TCBCCSSHHHHHHHSCSSCEEEECSCGG---------------GHHHHHHHHGGGCCTTCEEEECSSCCH
T ss_pred ----------CCEEeCCHHHHHhcCCCCCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEeCCCCCh
Confidence 234567888889889 9999999764 367788899999999999999999999
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
.++++++.. +.+ .| +.++++
T Consensus 120 ~~~~~~~~~-------------------------------------------------------l~~---~g--~~~vda 139 (358)
T 4e21_A 120 QDDIRRADQ-------------------------------------------------------MRA---QG--ITYVDV 139 (358)
T ss_dssp HHHHHHHHH-------------------------------------------------------HHT---TT--CEEEEE
T ss_pred HHHHHHHHH-------------------------------------------------------HHH---CC--CEEEeC
Confidence 999877641 222 12 345677
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccC-------------------CceEEecCchhHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIP-------------------RKHILTTNTWSSELSK 301 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~-------------------~~~v~~~~~~~Ae~~K 301 (598)
|.+..+-.+..+. .+|+||++ ++++.++++|+.++. ...+++|+.++|+++|
T Consensus 140 pVsGg~~~a~~G~----~im~GG~~-----~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~K 210 (358)
T 4e21_A 140 GTSGGIFGLERGY----CLMIGGEK-----QAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVK 210 (358)
T ss_dssp EEECGGGHHHHCC----EEEEESCH-----HHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHH
T ss_pred CCCCCHHHHhcCC----eeeecCCH-----HHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHH
Confidence 7765543343332 58999975 689999999999982 2467788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc------------------------CCCHHHHHHHHcCCcccccccc-------ccC
Q psy11160 302 LAANAFLAQRISSINSLSAVCEAT------------------------GADVSEVAKAVGLDSRIGAKFL-------QAS 350 (598)
Q Consensus 302 l~~N~~~~~~ia~~nE~~~la~~~------------------------gid~~ev~~~l~~~~ri~~~~l-------~~~ 350 (598)
+++|.+.+.++++.+|...++++. |+|..++.++++....+++.++ .-+
T Consensus 211 l~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~ 290 (358)
T 4e21_A 211 MVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDS 290 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999998 8999999999998764433221 112
Q ss_pred cccc-ccchhhhH---HHHHHHHHHcCCh
Q psy11160 351 VGFG-GSCFQKDI---LNLVYICECLNLP 375 (598)
Q Consensus 351 ~gfg-g~cl~KD~---~~L~~~a~~~G~~ 375 (598)
+.+. -.-..||. +.....|.+.|++
T Consensus 291 p~~~~~~~~~~d~g~~r~~~~~A~~~gvp 319 (358)
T 4e21_A 291 PDLQEFQGRVSDSGEGRWTVAAAIDEGVP 319 (358)
T ss_dssp TTCTTC--CCCCCSHHHHHHHHHHHHTCC
T ss_pred CChHHHHHHHHhcCcHHHHHHHHHHcCCC
Confidence 2221 12233454 5577778888876
No 30
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.90 E-value=5e-22 Score=204.46 Aligned_cols=254 Identities=17% Similarity=0.233 Sum_probs=192.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|.||..+|..|+. .|++|++||+++++.+.+.+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~---------------------------~g~~V~~~~~~~~~~~~~~~~----------- 47 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK---------------------------AGYSLVVSDRNPEAIADVIAA----------- 47 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHT-----------
T ss_pred ceEEEECchHHHHHHHHHHHh---------------------------CCCEEEEEeCCHHHHHHHHHC-----------
Confidence 699999999999999999999 899999999999999887742
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH---HHHHHHcCCCcEEEEecCCchHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA---RMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
++..+.++.++++++|+||+|+|++. .++.++ +.+.+.++++++|+..||..+.+
T Consensus 48 --------g~~~~~~~~~~~~~~D~vi~~v~~~~--------------~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~ 105 (299)
T 1vpd_A 48 --------GAETASTAKAIAEQCDVIITMLPNSP--------------HVKEVALGENGIIEGAKPGTVLIDMSSIAPLA 105 (299)
T ss_dssp --------TCEECSSHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHH
T ss_pred --------CCeecCCHHHHHhCCCEEEEECCCHH--------------HHHHHHhCcchHhhcCCCCCEEEECCCCCHHH
Confidence 24567788888999999999997653 356666 67888899999999999999988
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
++.+... +.. .| ..++.+|.
T Consensus 106 ~~~l~~~-------------------------------------------------------~~~---~g--~~~~~~pv 125 (299)
T 1vpd_A 106 SREISDA-------------------------------------------------------LKA---KG--VEMLDAPV 125 (299)
T ss_dssp HHHHHHH-------------------------------------------------------HHT---TT--CEEEECCE
T ss_pred HHHHHHH-------------------------------------------------------HHH---cC--CeEEEecC
Confidence 7766541 211 11 23445565
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
+..+..+..... .+++|++. +.++.++++|+.++. ..++.++.+.+..+|+++|.+.+..+.+++|+..++
T Consensus 126 ~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~ 196 (299)
T 1vpd_A 126 SGGEPKAIDGTL---SVMVGGDK-----AIFDKYYDLMKAMAG-SVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLA 196 (299)
T ss_dssp ESHHHHHHHTCE---EEEEESCH-----HHHHHHHHHHHTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHhHHhcCCE---EEEeCCCH-----HHHHHHHHHHHHHcC-CeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433222222222 46677742 578889999998873 455567889999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCcccc-------cccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHHH
Q psy11160 323 EATGADVSEVAKAVGLDSRIG-------AKFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYESL 388 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~-------~~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~~ 388 (598)
++.|++.+++.+++..+..-+ +.++ ++.+||...++.||+..+.+.+++.|++ .+.+.+.++++.+
T Consensus 197 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~ 272 (299)
T 1vpd_A 197 TKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQAL 272 (299)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 999999999999988654211 1122 2357888999999999999999999987 3444444444443
No 31
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.89 E-value=6.6e-24 Score=233.60 Aligned_cols=272 Identities=35% Similarity=0.446 Sum_probs=176.0
Q ss_pred cCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEE
Q psy11160 181 QGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRIL 260 (598)
Q Consensus 181 ~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~ 260 (598)
.++.+|+++++++++.|+++++++.+||.+||+|||+++. +.+.++... ....+..+....+|++.-
T Consensus 105 ~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~----l~~~l~~~~---------~~~~~~d~~v~~~Pe~~~ 171 (481)
T 2o3j_A 105 KGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAES----IGCILREAQ---------KNNENLKFQVLSNPEFLA 171 (481)
T ss_dssp TTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHH----HHHHHHHHT---------C----CCEEEEECCCCCC
T ss_pred ccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHH----HHHHHHHhh---------CcCcCCceEEEeCccccc
Confidence 3468999999999999999999999999999999999973 444332100 001233344567888764
Q ss_pred EccCCCchhHHHHHHHHHHHhcccCCceEEecCch--hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHc
Q psy11160 261 IGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTW--SS-ELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVG 337 (598)
Q Consensus 261 vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~--~A-e~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~ 337 (598)
.|. +.. .++. ..++.+|+.. .+ +..+.+..+|....- .......++..+|+.|+++
T Consensus 172 ~G~--------a~~---~~~~----~~~iviG~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~d~~~ae~~Kl~~ 230 (481)
T 2o3j_A 172 EGT--------AMK---DLAN----PDRVLIGGESSPEGLQAVAELVRIYENWVP------RNRIITTNTWSSELSKLVA 230 (481)
T ss_dssp TTC--------HHH---HHHS----CSCEEEEECSSHHHHHHHHHHHHHHHTTSC------GGGEEEEEHHHHHHHHHHH
T ss_pred ccc--------hhh---cccC----CCEEEEEecCchhhHHHHHHHHHHHHhhcC------CCeEEecCHHHHHHHHHHH
Confidence 442 222 2221 2345544322 11 233334333332100 0001112344578888887
Q ss_pred CCccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHH
Q psy11160 338 LDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAI 417 (598)
Q Consensus 338 ~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l 417 (598)
|..+ ...++| +|++..+|++.|++. .++++.+.. +.++ |.
T Consensus 231 N~~~------a~~ia~--------~nE~~~la~~~Gid~-----~~v~~~~~~---~~ri---~~--------------- 270 (481)
T 2o3j_A 231 NAFL------AQRISS--------INSISAVCEATGAEI-----SEVAHAVGY---DTRI---GS--------------- 270 (481)
T ss_dssp HHHH------HHHHHH--------HHHHHHHHHHHSCCH-----HHHHHHHHT---STTT---CS---------------
T ss_pred HHHH------HHHHHH--------HHHHHHHHHHhCcCH-----HHHHHHHcc---CCCC---CC---------------
Confidence 7543 234567 999999999999983 455555431 1111 10
Q ss_pred HHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccC
Q psy11160 418 HVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMM 497 (598)
Q Consensus 418 ~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~ 497 (598)
..|.|+++ +|+| |++.|++.+++.|. +...+...
T Consensus 271 -------------~~~~pg~g--------------~gg~---c~~KD~~~l~~~A~------------~~g~~~~~---- 304 (481)
T 2o3j_A 271 -------------KFLQASVG--------------FGGS---CFQKDVLSLVYLCE------------SLNLPQVA---- 304 (481)
T ss_dssp -------------SSCCCCSC--------------CCSS---SHHHHHHHHHHHHH------------HTTCHHHH----
T ss_pred -------------CCCCCCCc--------------cCCc---cHHHHHHHHHHHHH------------HcCCCccc----
Confidence 12455432 5667 88888876654331 01110000
Q ss_pred CCcEEEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHH
Q psy11160 498 KPAYIFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRT 577 (598)
Q Consensus 498 ~~~iI~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~ 577 (598)
| + ...+.++|+.||.++++++.+.+++.+++++|+|||||||+||||+||||++.|++.
T Consensus 305 -~-l-------------------~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~ 363 (481)
T 2o3j_A 305 -D-Y-------------------WQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKH 363 (481)
T ss_dssp -H-H-------------------HHHHHHHHHHHHHHHHHHHHHHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHH
T ss_pred -h-H-------------------HHHHHHHHHhhHHHHHHHHHHhhccccCCCeEEEEeeeeCCCCCccccChHHHHHHH
Confidence 0 0 145778999999999999999997778999999999999999999999999999999
Q ss_pred HHhCCCEEEEECCCCC
Q psy11160 578 LLYEGAKLKIYDPKLM 593 (598)
Q Consensus 578 l~~~g~~v~~~DP~~~ 593 (598)
|.++|++|.+|||++.
T Consensus 364 L~~~g~~v~~~DP~~~ 379 (481)
T 2o3j_A 364 LMEEHAKLSVYDPKVQ 379 (481)
T ss_dssp HHHTTCEEEEECSSSC
T ss_pred HHHCCCEEEEECCCCC
Confidence 9999999999999985
No 32
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.89 E-value=1.4e-23 Score=225.94 Aligned_cols=260 Identities=17% Similarity=0.194 Sum_probs=171.0
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEEE
Q psy11160 182 GRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRILI 261 (598)
Q Consensus 182 ~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~v 261 (598)
.+.+|+++++++++.|++ ++++.+||.+||+|+|+++ .+.+ . + +.. ...++|+++-.
T Consensus 89 ~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~----~l~~-----~----------~--~~~-~v~~~Pe~~~~ 145 (402)
T 1dlj_A 89 INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFIT----EMRQ-----K----------F--QTD-RIIFSPEFLRE 145 (402)
T ss_dssp TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHH----HHHH-----H----------T--TCS-CEEECCCCCCT
T ss_pred CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHH----HHHH-----H----------h--CCC-eEEECCccccC
Confidence 457899999999999999 9999999999999999986 2332 0 1 111 34567887654
Q ss_pred ccCCCchhHHHHHHHHHHHhcccCCceEEecCch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q psy11160 262 GGEETPEGYAAIESLSWVYEHWIPRKHILTTNTW-----SSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAV 336 (598)
Q Consensus 262 Gg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~-----~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l 336 (598)
|.. .. ... . ..++.+|+.. ..+.++.+...|....+. +.. .....++..+++.|++
T Consensus 146 G~a--------~~---~~~---~-~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~--~~~~~di~~ae~~Kl~ 206 (402)
T 1dlj_A 146 SKA--------LY---DNL---Y-PSRIIVSCEENDSPKVKADAEKFALLLKSAAKK--NNV--PVLIMGASEAEAVKLF 206 (402)
T ss_dssp TST--------TH---HHH---S-CSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSC--SCC--CEEEECHHHHHHHHHH
T ss_pred cch--------hh---ccc---C-CCEEEEeCCCcccchhHHHHHHHHHHHhhhhcc--CCc--eEEecChHHHHHHHHH
Confidence 432 11 111 1 2445555433 223333232222210000 000 0001245667888888
Q ss_pred cCCccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChH
Q psy11160 337 GLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPA 416 (598)
Q Consensus 337 ~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~ 416 (598)
.|..+ ...++| +|+++.+|++.|++. .++++.+.. +.+| | +
T Consensus 207 ~N~~~------a~~ia~--------~nE~~~l~~~~Gid~-----~~v~~~~~~---~~ri---~-------------~- 247 (402)
T 1dlj_A 207 ANTYL------ALRVAY--------FNELDTYAESRKLNS-----HMIIQGISY---DDRI---G-------------M- 247 (402)
T ss_dssp HHHHH------HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHHT---STTT---C-------------S-
T ss_pred HHHHH------HHHHHH--------HHHHHHHHHHhCCCH-----HHHHHHhcc---CCCC---C-------------c-
Confidence 87643 334677 999999999999983 455555431 1111 0 0
Q ss_pred HHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhcc
Q psy11160 417 IHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGM 496 (598)
Q Consensus 417 l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m 496 (598)
..+.|++ ++|+| |++.|++.++..+. .+
T Consensus 248 --------------~~~~pg~--------------g~gg~---c~~kD~~~l~~~a~------------~~--------- 275 (402)
T 1dlj_A 248 --------------HYNNPSF--------------GYGGY---SLPKDTKQLLANYN------------NI--------- 275 (402)
T ss_dssp --------------SSCCCCS--------------SCCSS---HHHHHHHHHHHHHT------------TS---------
T ss_pred --------------CCCCCCC--------------ccCCc---cHHhhHHHHHHHhc------------CC---------
Confidence 1123433 26777 88888877654320 00
Q ss_pred CCCcEEEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcC-CCCCCEEEEEeeecCCCCCCcCCCchHHHH
Q psy11160 497 MKPAYIFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFN-TVSDKHIAILGFAFKKNTGDTRESPAIHVC 575 (598)
Q Consensus 497 ~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~-~~~~~~i~v~GlafK~~~~d~R~sp~~~i~ 575 (598)
.+.+ ...++++|+.||+++++++.+.+++ .+++++|+|||||||+||||+||||++.|+
T Consensus 276 -~~~l-------------------~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~v~vlGlafK~~~~d~R~sp~~~i~ 335 (402)
T 1dlj_A 276 -PQTL-------------------IEAIVSSNNVRKSYIAKQIINVLKEQESPVKVVGVYRLIMKSNSDNFRESAIKDVI 335 (402)
T ss_dssp -SCSH-------------------HHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCEEEEECCCSSTTCSCCTTCHHHHHH
T ss_pred -ChHH-------------------HHHHHHHHHHhHHHHHHHHHHHhhhcCCCCCEEEEEeeeccCCCcccccChHHHHH
Confidence 0111 1467899999999999999999864 678999999999999999999999999999
Q ss_pred HHHHhCCCEEEEECCCCCC
Q psy11160 576 RTLLYEGAKLKIYDPKLMS 594 (598)
Q Consensus 576 ~~l~~~g~~v~~~DP~~~~ 594 (598)
+.|.++|++|.+|||++.+
T Consensus 336 ~~L~~~g~~v~~~DP~~~~ 354 (402)
T 1dlj_A 336 DILKSKDIKIIIYEPMLNK 354 (402)
T ss_dssp HHHHTSSCEEEEECTTCSC
T ss_pred HHHHHCCCEEEEECCCCCh
Confidence 9999999999999998754
No 33
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.88 E-value=5.9e-21 Score=196.65 Aligned_cols=256 Identities=16% Similarity=0.175 Sum_probs=190.9
Q ss_pred CCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
.++|||+|||+|.||..+|..|+. .|++|++||+++++.+.+.+.
T Consensus 2 ~~~~~i~iiG~G~~G~~~a~~l~~---------------------------~g~~V~~~~~~~~~~~~~~~~-------- 46 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGKPMAINLLK---------------------------EGVTVYAFDLMEANVAAVVAQ-------- 46 (301)
T ss_dssp --CCEEEEECCCTTHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHTT--------
T ss_pred CCCCEEEEECccHHHHHHHHHHHH---------------------------CCCeEEEEeCCHHHHHHHHHC--------
Confidence 346899999999999999999999 899999999999999887752
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH---HHHHHcCCCcEEEEecCCc
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR---MIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~ivv~~STv~ 159 (598)
++..++++.++++++|+||+|+|.+. .++.++. .+.+.++++++|+..|+..
T Consensus 47 -----------g~~~~~~~~~~~~~~D~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 47 -----------GAQACENNQKVAAASDIIFTSLPNAG--------------IVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp -----------TCEECSSHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred -----------CCeecCCHHHHHhCCCEEEEECCCHH--------------HHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 24556788888999999999997653 3566664 7888899999999999999
Q ss_pred hHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEE
Q psy11160 160 VRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILS 239 (598)
Q Consensus 160 ~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~ 239 (598)
|++.+.+... +.. .| +.++.
T Consensus 102 ~~~~~~l~~~-------------------------------------------------------~~~---~g--~~~~~ 121 (301)
T 3cky_A 102 PSSTLKMAKV-------------------------------------------------------AAE---KG--IDYVD 121 (301)
T ss_dssp HHHHHHHHHH-------------------------------------------------------HHH---TT--CEEEE
T ss_pred HHHHHHHHHH-------------------------------------------------------HHH---cC--CeEEE
Confidence 8887766541 111 11 23345
Q ss_pred CCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 240 NPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLS 319 (598)
Q Consensus 240 ~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~ 319 (598)
+|....+..+..+. ..+++|++. +.++.++++|+.++. ..++++..+.+..+|+++|.+....+.+++|+.
T Consensus 122 ~p~~~~~~~a~~g~---~~~~~~g~~-----~~~~~v~~ll~~~g~-~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~ 192 (301)
T 3cky_A 122 APVSGGTKGAEAGT---LTIMVGASE-----AVFEKIQPVLSVIGK-DIYHVGDTGAGDAVKIVNNLLLGCNMASLAEAL 192 (301)
T ss_dssp CCEESHHHHHHHTC---EEEEEESCH-----HHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHcCC---eEEEECCCH-----HHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543221111111 135677742 578889999998873 445577889999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHcCCcc-------ccc-ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 320 AVCEATGADVSEVAKAVGLDSR-------IGA-KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 320 ~la~~~gid~~ev~~~l~~~~r-------i~~-~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
.++++.|++.+++.+++..... .++ .++ ++.+||...++.||+..+.+.+++.|++ .+.+.+.++++.
T Consensus 193 ~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~ 271 (301)
T 3cky_A 193 VLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEG 271 (301)
T ss_dssp HHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 9999999999999999986531 122 232 3456888899999999999999999987 334434444443
No 34
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.88 E-value=3.8e-24 Score=235.16 Aligned_cols=272 Identities=22% Similarity=0.293 Sum_probs=176.2
Q ss_pred ccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEE
Q psy11160 180 FQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRI 259 (598)
Q Consensus 180 ~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv 259 (598)
...+.+||++++++++.|+++++++.+||.+||+||||++.+.+.+.+.+. .+.+ +..+...++|+++
T Consensus 97 ~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~---------~g~~---~~~~~v~~~Pe~~ 164 (478)
T 2y0c_A 97 DEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELA---------KRGG---DQMFSVVSNPEFL 164 (478)
T ss_dssp CTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHH---------HTTC---CCCEEEEECCCCC
T ss_pred ccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhc---------CCCC---CccEEEEEChhhh
Confidence 345789999999999999999999999999999999999987776654110 0000 1234457778776
Q ss_pred EEccCCCchhHHHHHHHHHHHhcccCCceEEecCc-hhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q psy11160 260 LIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNT-WSS--ELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAV 336 (598)
Q Consensus 260 ~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~-~~A--e~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l 336 (598)
..|. +...+. . ...+.+|.. ... +..+.+..+|... +. ++ ......++..+|+.|++
T Consensus 165 ~eG~--------~~~~~~------~-p~~iviG~~~~~~~~~~~~~~~~l~~~~-~~--~~--~~~~~~di~~ae~~Kl~ 224 (478)
T 2y0c_A 165 KEGA--------AVDDFT------R-PDRIVIGCDDDVPGERARELMKKLYAPF-NR--NH--ERTLYMDVRSAEFTKYA 224 (478)
T ss_dssp CTTC--------HHHHHH------S-CSCEEEECCSSHHHHHHHHHHHHHTGGG-GS--SS--CCEEEECHHHHHHHHHH
T ss_pred cccc--------eeeccC------C-CCEEEEEECCCcccHHHHHHHHHHHHHH-hc--cC--CeEEcCCHHHHHHHHHH
Confidence 5553 221111 1 234555543 211 3444444333320 00 00 00111244556888888
Q ss_pred cCCccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChH
Q psy11160 337 GLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPA 416 (598)
Q Consensus 337 ~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~ 416 (598)
.|..+ ...++| +|++..+|++.|++. .++++.+.. ..|+ |.
T Consensus 225 ~N~~~------a~~ia~--------~nE~~~la~~~Gid~-----~~v~~~i~~---~~ri---g~-------------- 265 (478)
T 2y0c_A 225 ANAML------ATRISF--------MNELANLADRFGADI-----EAVRRGIGS---DPRI---GY-------------- 265 (478)
T ss_dssp HHHHH------HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHHT---STTT---CS--------------
T ss_pred HHHHH------HHHHHH--------HHHHHHHHHHhCCCH-----HHHHHHHhc---CCcc---Cc--------------
Confidence 77543 334567 999999999999983 344443321 1111 10
Q ss_pred HHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhcc
Q psy11160 417 IHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGM 496 (598)
Q Consensus 417 l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m 496 (598)
..|.|.. .+|++ |+..|+..+++.+
T Consensus 266 --------------~~~~pG~--------------g~gg~---c~~kD~~~l~~~A------------------------ 290 (478)
T 2y0c_A 266 --------------HFLYAGC--------------GYGGS---CFPKDVEALIRTA------------------------ 290 (478)
T ss_dssp --------------TTCCCSS--------------CCCSS---SHHHHHHHHHHHH------------------------
T ss_pred --------------ccCCCCc--------------ccccC---cCHHHHHHHHHHH------------------------
Confidence 0122322 14555 6655554433211
Q ss_pred CCCcEEEecCCCCChhhhhhccce---eeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHH
Q psy11160 497 MKPAYIFDGRKILNHDALLDIGFN---VHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIH 573 (598)
Q Consensus 497 ~~~~iI~D~r~i~d~~~~~~~G~~---y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~ 573 (598)
++.|+. .+.+.++|+.||+++++++.+.+++++++++|+||||||||||||+||||++.
T Consensus 291 ------------------~~~gv~~pl~~~v~~in~~~~~~~~~~~~~~~~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~ 352 (478)
T 2y0c_A 291 ------------------DEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRE 352 (478)
T ss_dssp ------------------HHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHCSCCTTCEEEEECCSSSSSCCCCTTCHHHH
T ss_pred ------------------HHcCCCcHHHHHHHHHHHHhHHHHHHHHHHHhcccCCCCEEEEEecccCCCCCccccChHHH
Confidence 111221 14678899999999999999999778999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEECCCCCCc
Q psy11160 574 VCRTLLYEGAKLKIYDPKLMSR 595 (598)
Q Consensus 574 i~~~l~~~g~~v~~~DP~~~~~ 595 (598)
|++.|.++|++|.+|||+++++
T Consensus 353 i~~~L~~~g~~v~~~DP~~~~~ 374 (478)
T 2y0c_A 353 LIAELLSRGARIAAYDPVAQEE 374 (478)
T ss_dssp HHHHHHHTTCEEEEECTTTHHH
T ss_pred HHHHHHHCCCEEEEECCCccHH
Confidence 9999999999999999998653
No 35
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.88 E-value=2.4e-23 Score=228.44 Aligned_cols=270 Identities=35% Similarity=0.458 Sum_probs=176.1
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCCEEEE
Q psy11160 182 GRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRILI 261 (598)
Q Consensus 182 ~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~v 261 (598)
++.+||+|++++++.|+++++++.+||.+||+|+|+++ .+.+.++.. ...+..+...++|+++..
T Consensus 102 ~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~----~l~~~l~~~-----------~~~~~d~~V~~~Pe~~~~ 166 (467)
T 2q3e_A 102 GRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAE----SIRRIFDAN-----------TKPNLNLQVLSNPEFLAE 166 (467)
T ss_dssp TTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHH----HHHHHHHHT-----------CCTTCEEEEEECCCCCCT
T ss_pred cCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHH----HHHHHHHHh-----------CCCCCCeEEEeCHHHhhc
Confidence 35799999999999999999999999999999999986 255433210 011223344567776543
Q ss_pred ccCCCchhHHHHHHHHHHHhcccCCceEEecCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcC
Q psy11160 262 GGEETPEGYAAIESLSWVYEHWIPRKHILTTNT---WSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVGL 338 (598)
Q Consensus 262 Gg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~---~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~ 338 (598)
|. +. ..++. ..++.+++. .+.+..+.+..+|.... . .......++..+++.|++.|
T Consensus 167 G~--------~~---~d~~~----~~rivvGg~~~~~~~~~~~~~~~l~~~~~-g-----~~~~~~~~~~~ae~~Kl~~N 225 (467)
T 2q3e_A 167 GT--------AI---KDLKN----PDRVLIGGDETPEGQRAVQALCAVYEHWV-P-----REKILTTNTWSSELSKLAAN 225 (467)
T ss_dssp TS--------HH---HHHHS----CSCEEEECCSSHHHHHHHHHHHHHHTTTS-C-----GGGEEEECHHHHHHHHHHHH
T ss_pred cc--------ch---hhccC----CCEEEECCCCCCCCHHHHHHHHHHHHHhc-c-----CCeEEecCHHHHHHHHHHHH
Confidence 32 22 22221 245555542 24455555554444320 0 00011134456788888877
Q ss_pred CccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHHH
Q psy11160 339 DSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAIH 418 (598)
Q Consensus 339 ~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~ 418 (598)
..+ ...++| +|++..+|++.|++. .++++.+.. +.+ +|.
T Consensus 226 ~~~------a~~ia~--------~nE~~~l~~~~Gid~-----~~v~~~~~~---~~~---~~~---------------- 264 (467)
T 2q3e_A 226 AFL------AQRISS--------INSISALCEATGADV-----EEVATAIGM---DQR---IGN---------------- 264 (467)
T ss_dssp HHH------HHHHHH--------HHHHHHHHHHHTCCH-----HHHHHHHHT---STT---TCS----------------
T ss_pred HHH------HHHHHH--------HHHHHHHHHHhCcCH-----HHHHHHHcC---CCC---CCc----------------
Confidence 543 233567 999999999999983 345444431 111 010
Q ss_pred HHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccCC
Q psy11160 419 VCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMK 498 (598)
Q Consensus 419 li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~ 498 (598)
..+.|+++ +|++ |++.|++.+++.|. +.......+
T Consensus 265 ------------~~~~pg~g--------------~gg~---c~~kD~~~l~~~a~------------~~g~~~~~~---- 299 (467)
T 2q3e_A 265 ------------KFLKASVG--------------FGGS---CFQKDVLNLVYLCE------------ALNLPEVAR---- 299 (467)
T ss_dssp ------------SSCCCCSC--------------CCSS---SHHHHHHHHHHHHH------------HTTCHHHHH----
T ss_pred ------------cccCCCCC--------------CCCc---cHHHHHHHHHHHHH------------HcCCchHHH----
Confidence 11344432 4666 88877776654331 111110000
Q ss_pred CcEEEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHH
Q psy11160 499 PAYIFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTL 578 (598)
Q Consensus 499 ~~iI~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l 578 (598)
.+..+.++|+.|++++++++.+.+.+.++++||+||||||||||||+||||++.|++.|
T Consensus 300 ---------------------~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L 358 (467)
T 2q3e_A 300 ---------------------YWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYL 358 (467)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHhHHHHHHHHHHHhhcccCCCEEEEEeeccCCCCcchhhChHHHHHHHH
Confidence 03567789999999999999998766789999999999999999999999999999999
Q ss_pred HhCCCEEEEECCCCCC
Q psy11160 579 LYEGAKLKIYDPKLMS 594 (598)
Q Consensus 579 ~~~g~~v~~~DP~~~~ 594 (598)
.++|++|.+|||++..
T Consensus 359 ~~~g~~v~~~DP~~~~ 374 (467)
T 2q3e_A 359 MDEGAHLHIYDPKVPR 374 (467)
T ss_dssp HHTTCEEEEECSSSCH
T ss_pred HHCCCEEEEEcCccCH
Confidence 9999999999999753
No 36
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.88 E-value=9.9e-22 Score=201.71 Aligned_cols=253 Identities=19% Similarity=0.200 Sum_probs=189.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+|.||..+|..|+. .|++|++|| ++++++.+.+.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~---------------------------~g~~V~~~~-~~~~~~~~~~~---------- 44 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLAR---------------------------AGHQLHVTT-IGPVADELLSL---------- 44 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHH---------------------------TTCEEEECC-SSCCCHHHHTT----------
T ss_pred CCEEEEEccCHHHHHHHHHHHh---------------------------CCCEEEEEc-CHHHHHHHHHc----------
Confidence 4799999999999999999999 899999999 99888877642
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH---HHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR---MIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~ivv~~STv~~~ 161 (598)
++..+.++.++++++|+||+|+|.+. .++.++. .+.+.++++++|+..|+..|.
T Consensus 45 ---------g~~~~~~~~~~~~~~D~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~ 101 (295)
T 1yb4_A 45 ---------GAVNVETARQVTEFADIIFIMVPDTP--------------QVEDVLFGEHGCAKTSLQGKTIVDMSSISPI 101 (295)
T ss_dssp ---------TCBCCSSHHHHHHTCSEEEECCSSHH--------------HHHHHHHSTTSSTTSCCTTEEEEECSCCCHH
T ss_pred ---------CCcccCCHHHHHhcCCEEEEECCCHH--------------HHHHHHhCchhHhhcCCCCCEEEECCCCCHH
Confidence 12345678888999999999997653 2555665 677778899999999999988
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
+++++... +.+ .| ..++.+|
T Consensus 102 ~~~~l~~~-------------------------------------------------------~~~---~g--~~~~~~p 121 (295)
T 1yb4_A 102 ETKRFAQR-------------------------------------------------------VNE---MG--ADYLDAP 121 (295)
T ss_dssp HHHHHHHH-------------------------------------------------------HHT---TT--EEEEECC
T ss_pred HHHHHHHH-------------------------------------------------------HHH---cC--CeEEEcc
Confidence 88766541 221 11 3345566
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAV 321 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~l 321 (598)
.+..+..+..+.. .+++|++. ++++.++++|+.++. ..+++++.+.+..+|+++|.+....+.+++|+..+
T Consensus 122 ~~~~~~~a~~g~~---~~~~~~~~-----~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l 192 (295)
T 1yb4_A 122 VSGGEIGAREGTL---SIMVGGEQ-----KVFDRVKPLFDILGK-NITLVGGNGDGQTCKVANQIIVALNIEAVSEALVF 192 (295)
T ss_dssp EESHHHHHHHTCE---EEEEESCH-----HHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHcCCe---EEEECCCH-----HHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5543222222221 36678742 578889999998873 45567788999999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 322 CEATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 322 a~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
+++.|++..++.+++.....-++ .++ +..+||...++.||+.++.+.+++.|++ .+.+.+.++++.
T Consensus 193 ~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 268 (295)
T 1yb4_A 193 ASKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNT 268 (295)
T ss_dssp HHHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 99999999999999987642111 112 3457889999999999999999999987 334444444443
No 37
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.88 E-value=3.8e-21 Score=197.59 Aligned_cols=254 Identities=15% Similarity=0.170 Sum_probs=187.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|.||.++|..|++ .|++|++||+++++++.+++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~---------------------------~g~~V~~~~~~~~~~~~~~~~----------- 42 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMK---------------------------HGYPLIIYDVFPDACKEFQDA----------- 42 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHH---------------------------TTCCEEEECSSTHHHHHHHTT-----------
T ss_pred CeEEEEeccHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHc-----------
Confidence 589999999999999999999 899999999999999988752
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHH---HHHHcCCCcEEEEecCCchHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARM---IAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~ivv~~STv~~~~ 162 (598)
+++.++++.++++++|+||+|||.|. .++.++.. +.+.++++++||..||+.+.+
T Consensus 43 --------g~~~~~~~~~~~~~~Dvvi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~ 100 (296)
T 2gf2_A 43 --------GEQVVSSPADVAEKADRIITMLPTSI--------------NAIEAYSGANGILKKVKKGSLLIDSSTIDPAV 100 (296)
T ss_dssp --------TCEECSSHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTSGGGTCCTTCEEEECSCCCHHH
T ss_pred --------CCeecCCHHHHHhcCCEEEEeCCCHH--------------HHHHHHhCchhHHhcCCCCCEEEECCCCCHHH
Confidence 24567788888999999999997653 34555554 345678899999999999988
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
.+++... +.+ .+ ..+..+|.
T Consensus 101 ~~~~~~~-------------------------------------------------------~~~---~g--~~~~~~p~ 120 (296)
T 2gf2_A 101 SKELAKE-------------------------------------------------------VEK---MG--AVFMDAPV 120 (296)
T ss_dssp HHHHHHH-------------------------------------------------------HHH---TT--CEEEECCE
T ss_pred HHHHHHH-------------------------------------------------------HHH---cC--CEEEEcCC
Confidence 8766541 111 11 12344554
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
...+..+..... .+++|+++ ++++.++++|+.++. ..+.++..+.+...|+++|.+.+..+.+++|+..++
T Consensus 121 ~~g~~~a~~~~~---~~~~~~~~-----~~~~~v~~l~~~~g~-~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~ 191 (296)
T 2gf2_A 121 SGGVGAARSGNL---TFMVGGVE-----DEFAAAQELLGCMGS-NVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLG 191 (296)
T ss_dssp ESHHHHHHHTCE---EEEEESCG-----GGHHHHHHHHTTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHhcCcE---EEEeCCCH-----HHHHHHHHHHHHHcC-CeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432211111111 35677754 467889999998873 455567788999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCcccc---------ccc-------cccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHH
Q psy11160 323 EATGADVSEVAKAVGLDSRIG---------AKF-------LQASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLY 385 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~ri~---------~~~-------l~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i 385 (598)
++.|++.+++.+++......+ +.. -+..+||...++.||+..+.+++++.|++ .+.+.+.+++
T Consensus 192 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~ 271 (296)
T 2gf2_A 192 IRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIY 271 (296)
T ss_dssp HHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 999999999999988643110 001 13346789999999999999999999987 3444444555
Q ss_pred HHH
Q psy11160 386 ESL 388 (598)
Q Consensus 386 ~~~ 388 (598)
+.+
T Consensus 272 ~~~ 274 (296)
T 2gf2_A 272 RMM 274 (296)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 38
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.87 E-value=1.4e-21 Score=214.24 Aligned_cols=209 Identities=14% Similarity=0.169 Sum_probs=168.3
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+|+|+|||+|.||.+||..|++ .||+|++||+++++++.+.+....
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~---------------------------~G~~V~v~dr~~~~~~~l~~~g~~------ 49 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMND---------------------------HGFVVCAFNRTVSKVDDFLANEAK------ 49 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSTHHHHHHHHTTTT------
T ss_pred CCCEEEEEChhHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHhcccC------
Confidence 35799999999999999999999 899999999999999998753110
Q ss_pred HHHHhhhcCCceEEecCHHHHhc---cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ---KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~---~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
..++..+.+++++++ ++|+||+|||++. .++++++++.+.++++++||+.||+.|
T Consensus 50 --------g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~--------------~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 50 --------GTKVVGAQSLKEMVSKLKKPRRIILLVKAGQ--------------AVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp --------TSSCEECSSHHHHHHTBCSSCEEEECSCSSH--------------HHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred --------CCceeccCCHHHHHhhccCCCEEEEecCChH--------------HHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 124566788888776 5999999998752 477888999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
.++++++. .+.+ .| +.++.+
T Consensus 108 ~~t~~~~~-------------------------------------------------------~l~~---~G--i~fvd~ 127 (484)
T 4gwg_A 108 RDTTRRCR-------------------------------------------------------DLKA---KG--ILFVGS 127 (484)
T ss_dssp HHHHHHHH-------------------------------------------------------HHHH---TT--CEEEEE
T ss_pred hHHHHHHH-------------------------------------------------------HHHh---hc--cccccC
Confidence 99876654 1222 12 345666
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCce-------EEecCchhHHHHHHHHHHHHHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKH-------ILTTNTWSSELSKLAANAFLAQRIS 313 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~-------v~~~~~~~Ae~~Kl~~N~~~~~~ia 313 (598)
|.+..+-.+.++ | .+|+||+. ++++.++++|+.++. .. +++|+.++|+.+|+++|.+.+..++
T Consensus 128 pVsGg~~gA~~G---~-~im~GG~~-----ea~~~v~pll~~ig~-~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~ 197 (484)
T 4gwg_A 128 GVSGGEEGARYG---P-SLMPGGNK-----EAWPHIKTIFQGIAA-KVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQ 197 (484)
T ss_dssp EEESHHHHHHHC---C-EEEEEECG-----GGHHHHHHHHHHHSC-BCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHhcC---C-eeecCCCH-----HHHHHHHHHHHHhcC-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHH
Confidence 766543323222 2 68999975 578999999999874 33 5678899999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCHHHHHHHHc
Q psy11160 314 SINSLSAVCEA-TGADVSEVAKAVG 337 (598)
Q Consensus 314 ~~nE~~~la~~-~gid~~ev~~~l~ 337 (598)
+++|+..++++ +|+|+.++.+++.
T Consensus 198 ~iaEa~~l~~~~~Gld~~~l~~v~~ 222 (484)
T 4gwg_A 198 LICEAYHLMKDVLGMAQDEMAQAFE 222 (484)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999 9999999999873
No 39
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=195.71 Aligned_cols=256 Identities=16% Similarity=0.161 Sum_probs=187.2
Q ss_pred CCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
..+|+|+|||+|.||..+|..|+. .|++|++||+++++.+.+.+.
T Consensus 28 ~~~~~I~iIG~G~mG~~~a~~l~~---------------------------~g~~V~~~~~~~~~~~~~~~~-------- 72 (316)
T 2uyy_A 28 PTDKKIGFLGLGLMGSGIVSNLLK---------------------------MGHTVTVWNRTAEKCDLFIQE-------- 72 (316)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSGGGGHHHHHT--------
T ss_pred CCCCeEEEEcccHHHHHHHHHHHh---------------------------CCCEEEEEeCCHHHHHHHHHc--------
Confidence 345899999999999999999999 899999999999988877641
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHH---HHHcCCCcEEEEecCCc
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMI---AEIATDNKIVVEKSTVP 159 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~ivv~~STv~ 159 (598)
++..+.++.++++++|+||+|||+|. .++.++..+ .+.+.++++||..||+.
T Consensus 73 -----------g~~~~~~~~~~~~~~DvVi~av~~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 73 -----------GARLGRTPAEVVSTCDITFACVSDPK--------------AAKDLVLGPSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp -----------TCEECSCHHHHHHHCSEEEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCC
T ss_pred -----------CCEEcCCHHHHHhcCCEEEEeCCCHH--------------HHHHHHcCchhHhhcCCCCCEEEECCCCC
Confidence 23456778888999999999998653 355555543 46788999999999999
Q ss_pred hHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEE
Q psy11160 160 VRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILS 239 (598)
Q Consensus 160 ~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~ 239 (598)
+.+.+++... +.. .+ ..++.
T Consensus 128 ~~~~~~l~~~-------------------------------------------------------~~~---~~--~~~v~ 147 (316)
T 2uyy_A 128 ADTVTELAQV-------------------------------------------------------IVS---RG--GRFLE 147 (316)
T ss_dssp HHHHHHHHHH-------------------------------------------------------HHH---TT--CEEEE
T ss_pred HHHHHHHHHH-------------------------------------------------------HHH---cC--CEEEE
Confidence 9888766542 111 01 12344
Q ss_pred CCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 240 NPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLS 319 (598)
Q Consensus 240 ~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~ 319 (598)
+|.+..+.....+. ..+++||+. ++++.++++|+.++. ..+..++.+.+...|++.|.+....+.+++|+.
T Consensus 148 ~p~~g~~~~~~~g~---~~~~~~g~~-----~~~~~v~~ll~~~g~-~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~ 218 (316)
T 2uyy_A 148 APVSGNQQLSNDGM---LVILAAGDR-----GLYEDCSSCFQAMGK-TSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGL 218 (316)
T ss_dssp CCEESCHHHHHHTC---EEEEEEECH-----HHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccCChhHHhhCC---EEEEeCCCH-----HHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45433221111111 135567742 577888999998873 344566789999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHcCCccccc-------ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 320 AVCEATGADVSEVAKAVGLDSRIGA-------KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 320 ~la~~~gid~~ev~~~l~~~~ri~~-------~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
.++++.|++.+++.+++......++ .++ ++.+||...++.||+..+.+.+++.|++ .+.+.+.++++.
T Consensus 219 ~la~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~ 296 (316)
T 2uyy_A 219 TLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKR 296 (316)
T ss_dssp HHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 9999999999999999886542111 111 3567888899999999999999999987 233334444443
No 40
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.86 E-value=9.1e-24 Score=228.31 Aligned_cols=215 Identities=21% Similarity=0.298 Sum_probs=147.5
Q ss_pred CchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy11160 247 GTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATG 326 (598)
Q Consensus 247 G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~g 326 (598)
|..+...++|||+..|. +++.+. . .+++.+|.. ..+..+.+..+|..... . .-.++
T Consensus 165 ~~~f~v~~~PErl~eG~--------a~~d~~---~----~~riViG~~-~~~a~~~~~~ly~~~~~----~----~~~~~ 220 (444)
T 3vtf_A 165 GVKFSVASNPEFLREGS--------ALEDFF---K----PDRIVIGAG-DERAASFLLDVYKAVDA----P----KLVMK 220 (444)
T ss_dssp TCCCEEEECCCCCCTTS--------HHHHHH---S----CSCEEEEES-SHHHHHHHHHHTTTSCS----C----EEEEC
T ss_pred CCCceeecCcccccCCc--------cccccc---c----CCcEEEcCC-CHHHHHHHHHHHhccCC----C----EEEec
Confidence 34566788999998773 333222 2 245554421 12223333333322110 0 01245
Q ss_pred CCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccC
Q psy11160 327 ADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKK 406 (598)
Q Consensus 327 id~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~ 406 (598)
...+|++|+++|.+| +.+++| +|+|+.+|+++|++. .++++.+. .++|| |.
T Consensus 221 ~~~AE~~Kl~eN~~r------avnIa~--------~NEla~ice~~GiDv-----~eV~~a~~---~d~ri---g~---- 271 (444)
T 3vtf_A 221 PREAELVKYASNVFL------ALKISF--------ANEVGLLAKRLGVDT-----YRVFEAVG---LDKRI---GR---- 271 (444)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHH--------HHHHHHHHHHTTCCH-----HHHHHHHH---TSTTS---CS----
T ss_pred hhHHHHHHHHHHHHH------HHHHHH--------HHHHHHHHHHcCCCH-----HHHHHHhc---cCCCC---CC----
Confidence 677899999998766 567899 999999999999993 57777764 22332 21
Q ss_pred CCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhh
Q psy11160 407 NTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVT 486 (598)
Q Consensus 407 ~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ 486 (598)
..+.|+ +++||| |++.|++.++..|. +
T Consensus 272 ------------------------~~l~PG--------------~G~GG~---CipkD~~~L~~~a~------------~ 298 (444)
T 3vtf_A 272 ------------------------HYFGAG--------------LGFGGS---CFPKDTLAFIRFGE------------S 298 (444)
T ss_dssp ------------------------TTCCCS--------------SCCCTT---THHHHHHHHHHHHH------------H
T ss_pred ------------------------CCCCCC--------------CCCCCc---ccCcCHHHHHHHHH------------h
Confidence 012233 347888 99999987754331 0
Q ss_pred ccHHHHHhccCCCcEEEecCCCCChhhhhhccceeeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCc
Q psy11160 487 LDYKRIYEGMMKPAYIFDGRKILNHDALLDIGFNVHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDT 566 (598)
Q Consensus 487 ld~~~l~~~m~~~~iI~D~r~i~d~~~~~~~G~~y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~ 566 (598)
+. ..+.+ .++++++|+.||+++++++.+.+ +.++++||+|||||||+||||+
T Consensus 299 ~g--------~~~~l-------------------i~a~~~iN~~~~~~vv~~l~~~~-~~l~g~~V~vlGlafK~~tdD~ 350 (444)
T 3vtf_A 299 LG--------LEMAI-------------------SKAVLRVNEYMPRYAVQLLEERL-GGLRGRHVGVLGLAFKPNTDDV 350 (444)
T ss_dssp TT--------CCCHH-------------------HHHHHHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECCSSSSSCCCC
T ss_pred cC--------CCHHH-------------------HHhhHHHHHHHHHHHHHHHHHHc-cccCCCEEEEEeeecCCCCCcc
Confidence 00 01111 14678899999999999998877 4689999999999999999999
Q ss_pred CCCchHHHHHHHHhCCCEEEEECCCCCCc
Q psy11160 567 RESPAIHVCRTLLYEGAKLKIYDPKLMSR 595 (598)
Q Consensus 567 R~sp~~~i~~~l~~~g~~v~~~DP~~~~~ 595 (598)
||||++.|++.|.++|++|.+|||+++++
T Consensus 351 ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~ 379 (444)
T 3vtf_A 351 RESRGVEVARLLLERGARVYVHDPMAMEK 379 (444)
T ss_dssp TTCHHHHHHHHHHHTTCEEEEECSSTHHH
T ss_pred ccCcHHHHHHHHHHCCCEEEEECCCCChH
Confidence 99999999999999999999999998654
No 41
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.84 E-value=8.3e-20 Score=186.64 Aligned_cols=250 Identities=16% Similarity=0.166 Sum_probs=182.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|.||..+|..|+. |++|++||+++++.+.+.+.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~----------------------------g~~V~~~~~~~~~~~~~~~~----------- 42 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR----------------------------RFPTLVWNRTFEKALRHQEE----------- 42 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT----------------------------TSCEEEECSSTHHHHHHHHH-----------
T ss_pred CeEEEEcccHHHHHHHHHHhC----------------------------CCeEEEEeCCHHHHHHHHHC-----------
Confidence 689999999999999998865 78999999999998887641
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
+...++ +.++++++|+||+|+|++. .++.+++.+.+.++++++|+..|+..+.+++.
T Consensus 43 --------g~~~~~-~~~~~~~~D~vi~~v~~~~--------------~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~ 99 (289)
T 2cvz_A 43 --------FGSEAV-PLERVAEARVIFTCLPTTR--------------EVYEVAEALYPYLREGTYWVDATSGEPEASRR 99 (289)
T ss_dssp --------HCCEEC-CGGGGGGCSEEEECCSSHH--------------HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHH
T ss_pred --------CCcccC-HHHHHhCCCEEEEeCCChH--------------HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHH
Confidence 112233 5567889999999987652 35667788888888999999999999888766
Q ss_pred HHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccC
Q psy11160 166 IMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLS 245 (598)
Q Consensus 166 ~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~ 245 (598)
+... +.. .| ..++.+|.+..
T Consensus 100 l~~~-------------------------------------------------------~~~---~g--~~~~~~p~~~~ 119 (289)
T 2cvz_A 100 LAER-------------------------------------------------------LRE---KG--VTYLDAPVSGG 119 (289)
T ss_dssp HHHH-------------------------------------------------------HHT---TT--EEEEECCEESH
T ss_pred HHHH-------------------------------------------------------HHH---cC--CEEEEecCCCC
Confidence 6541 111 01 23344453321
Q ss_pred cCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy11160 246 EGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEAT 325 (598)
Q Consensus 246 ~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~ 325 (598)
+..+..+ ...+++|++. +.++.++++| .++. ..+.+++.+.+..+|++.|.+....+.+++|+..++++.
T Consensus 120 ~~~~~~g---~~~~~~~~~~-----~~~~~~~~ll-~~g~-~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~ 189 (289)
T 2cvz_A 120 TSGAEAG---TLTVMLGGPE-----EAVERVRPFL-AYAK-KVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQ 189 (289)
T ss_dssp HHHHHHT---CEEEEEESCH-----HHHHHHGGGC-TTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhhC---CeEEEECCCH-----HHHHHHHHHH-hhcC-CeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111111 1135667642 5778889999 8763 345677788999999999999999999999999999999
Q ss_pred CCCHHHHHHHHcCCcc-------ccc-ccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 326 GADVSEVAKAVGLDSR-------IGA-KFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 326 gid~~ev~~~l~~~~r-------i~~-~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
|++.+++.+++..... .++ ..+ ++.+||...++.||+..+.+.+++.|++ .+.+.+.++++.
T Consensus 190 G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~ 262 (289)
T 2cvz_A 190 GVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEKAPSPLLRLAREVYEM 262 (289)
T ss_dssp TCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 9999999999986542 112 232 3456888899999999999999999987 334444444443
No 42
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.83 E-value=1.6e-21 Score=212.16 Aligned_cols=261 Identities=18% Similarity=0.218 Sum_probs=163.0
Q ss_pred cCCCCCchHHHHHHHHHHHHhcC---CceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccCcCchhhhcCCCC
Q psy11160 181 QGRAADLKYVEAAARMIAEIATD---NKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLSEGTAMTDLFNAD 257 (598)
Q Consensus 181 ~~~~~dl~~l~~A~~~Ia~~l~~---~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~ 257 (598)
..+.+||+|++++++.|++++++ +.+||.+||+|+|+|. +.+.+.++.. . ....|..+...++|+
T Consensus 90 ~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~---~~l~~~l~~~--~-------g~~~~~~~~v~~~Pe 157 (436)
T 1mv8_A 90 KNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVN---NVVIPLIEDC--S-------GKKAGVDFGVGTNPE 157 (436)
T ss_dssp TTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHH---HTHHHHHHHH--H-------SCCBTTTBEEEECCC
T ss_pred cCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchH---HHHHHHHHHh--c-------CcccCCcEEEEECcc
Confidence 35689999999999999999999 9999999999999964 3465533210 0 011123344567788
Q ss_pred EEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHc
Q psy11160 258 RILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVAKAVG 337 (598)
Q Consensus 258 rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~ 337 (598)
++..|. +.. .+.. ...+..+.. +.+..+.+..+|..... .+- ..++..+++.|++.
T Consensus 158 ~~~~G~--------~~~---~~~~----~~~iv~G~~-~~~~~~~~~~l~~~~~~-------~v~-~~~~~~ae~~Kl~~ 213 (436)
T 1mv8_A 158 FLREST--------AIK---DYDF----PPMTVIGEL-DKQTGDLLEEIYRELDA-------PII-RKTVEVAEMIKYTC 213 (436)
T ss_dssp CCCTTS--------HHH---HHHS----CSCEEEEES-SHHHHHHHHHHHTTSSS-------CEE-EEEHHHHHHHHHHH
T ss_pred cccccc--------cch---hccC----CCEEEEEcC-CHHHHHHHHHHHhccCC-------CEE-cCCHHHHHHHHHHH
Confidence 765442 221 2221 234444432 23344444444432110 000 12344567888887
Q ss_pred CCccccccccccCccccccchhhhHHHHHHHHHHcCChhHHHHHHHHHHHHhcccCCCeEEEEeccccCCCCcccCChHH
Q psy11160 338 LDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLNLPEVASYWQQLYESLFNTVSDKHIAILGFAFKKNTGDTRESPAI 417 (598)
Q Consensus 338 ~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~~~~~~~~~~i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l 417 (598)
|..+ ...++| +|++..+|++.|++. .++++.+.. ..++ |.++
T Consensus 214 N~~~------a~~ia~--------~nE~~~l~~~~Gid~-----~~v~~~~~~---~~r~---~~~~------------- 255 (436)
T 1mv8_A 214 NVWH------AAKVTF--------ANEIGNIAKAVGVDG-----REVMDVICQ---DHKL---NLSR------------- 255 (436)
T ss_dssp HHHH------HHHHHH--------HHHHHHHHHHTTSCH-----HHHHHHHTT---CTTT---TTSS-------------
T ss_pred HHHH------HHHHHH--------HHHHHHHHHHhCCCH-----HHHHHHhcC---CCCC---CCcc-------------
Confidence 6543 223567 999999999999983 344444321 1110 0000
Q ss_pred HHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCEEEEEeeccchhhccHHHHHhccC
Q psy11160 418 HVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMM 497 (598)
Q Consensus 418 ~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l~~~m~ 497 (598)
..|.|.. ..|++ |+..|+..+++.+
T Consensus 256 -------------~~~~pg~--------------g~gg~---~~~kD~~~l~~~a------------------------- 280 (436)
T 1mv8_A 256 -------------YYMRPGF--------------AFGGS---CLPKDVRALTYRA------------------------- 280 (436)
T ss_dssp -------------TTCSCCS--------------CCCSS---SHHHHHHHHHHHH-------------------------
T ss_pred -------------cCCCCcc--------------cccCc---CcHhhHHHHHHHH-------------------------
Confidence 0122321 24555 6655554433211
Q ss_pred CCcEEEecCCCCChhhhhhccce---eeeccchhhhHHHHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHH
Q psy11160 498 KPAYIFDGRKILNHDALLDIGFN---VHTVIDLNEYQKTRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHV 574 (598)
Q Consensus 498 ~~~iI~D~r~i~d~~~~~~~G~~---y~~v~~iN~~~~~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i 574 (598)
++.|+. .+.+.++|+.||+++++++.+. ++++|+|||||||+||||+||||++.|
T Consensus 281 -----------------~~~g~~~pl~~~v~~in~~~~~~~~~~~~~~-----~~~~v~vlGlafK~~~~d~r~s~~~~i 338 (436)
T 1mv8_A 281 -----------------SQLDVEHPMLGSLMRSNSNQVQKAFDLITSH-----DTRKVGLLGLSFKAGTDDLRESPLVEL 338 (436)
T ss_dssp -----------------HHTTCCCTTGGGHHHHHHHHHHHHHHHHTTS-----SCCEEEEECCSSSTTCCCCTTCHHHHH
T ss_pred -----------------HHcCCCcHHHHHHHHHHhHhHHHHHHHHHHh-----cCCEEEEEccccCCCCCccccCcHHHH
Confidence 011111 2567888999999999998743 689999999999999999999999999
Q ss_pred HHHHHhCCCEEEEECCCC
Q psy11160 575 CRTLLYEGAKLKIYDPKL 592 (598)
Q Consensus 575 ~~~l~~~g~~v~~~DP~~ 592 (598)
++.|.++|++|.+|||++
T Consensus 339 ~~~L~~~g~~v~~~DP~~ 356 (436)
T 1mv8_A 339 AEMLIGKGYELRIFDRNV 356 (436)
T ss_dssp HHHHHHTTCEEEEECHHH
T ss_pred HHHHHHCCCEEEEECCCC
Confidence 999999999999999985
No 43
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.9e-19 Score=196.06 Aligned_cols=246 Identities=13% Similarity=0.103 Sum_probs=182.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
..+|+|||+|.||.+||..|++ +|++|++||+++++++.++++..+ +
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~---------------------------~G~~V~v~dr~~~~~~~l~~~~~~----~-- 56 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAAD---------------------------HGFTVCAYNRTQSKVDHFLANEAK----G-- 56 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSSHHHHHHHHTTTT----T--
T ss_pred CCCEEEEeeHHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHccccc----C--
Confidence 3589999999999999999999 899999999999999998864221 0
Q ss_pred HHHhhhcCCceEEecCHHHHhcc---CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQK---AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~---adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.+++.+.++++++++ +|+||+|||++. .++++++++.+.++++++||+.||+.+.
T Consensus 57 --------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~--------------~v~~vl~~l~~~l~~g~iIId~s~~~~~ 114 (497)
T 2p4q_A 57 --------KSIIGATSIEDFISKLKRPRKVMLLVKAGA--------------PVDALINQIVPLLEKGDIIIDGGNSHFP 114 (497)
T ss_dssp --------SSEECCSSHHHHHHTSCSSCEEEECCCSSH--------------HHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred --------CCeEEeCCHHHHHhcCCCCCEEEEEcCChH--------------HHHHHHHHHHHhCCCCCEEEECCCCChh
Confidence 246778889888877 999999998752 4778889999999999999999999998
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
+++++... +.+ .| +.++..|
T Consensus 115 ~~~~l~~~-------------------------------------------------------l~~---~g--~~~v~~p 134 (497)
T 2p4q_A 115 DSNRRYEE-------------------------------------------------------LKK---KG--ILFVGSG 134 (497)
T ss_dssp HHHHHHHH-------------------------------------------------------HHH---TT--CEEEEEE
T ss_pred HHHHHHHH-------------------------------------------------------HHH---cC--CceeCCC
Confidence 88766541 222 12 2334455
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCc------eEEecCchhHHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRK------HILTTNTWSSELSKLAANAFLAQRISSI 315 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~------~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~ 315 (598)
....+..+..+ +.+++||+. ++++.++++|+.++. . ..+++..+.+..+|+++|.+.+..+..+
T Consensus 135 Vsgg~~~a~~G----~~im~gg~~-----e~~~~v~~ll~~~g~-~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~l 204 (497)
T 2p4q_A 135 VSGGEEGARYG----PSLMPGGSE-----EAWPHIKNIFQSISA-KSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLI 204 (497)
T ss_dssp EESHHHHHHHC----CEEEEEECG-----GGHHHHHHHHHHHSC-EETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccChhHhhcC----CeEEecCCH-----HHHHHHHHHHHHhcC-ccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 44332222221 258889864 478889999999874 3 3556778999999999999999999999
Q ss_pred HHHHHHHHH-cCCCHHHHHHHHc---CCccccc-------ccc--ccCccccccchh-----hhHH-HHHHHHHHcCCh
Q psy11160 316 NSLSAVCEA-TGADVSEVAKAVG---LDSRIGA-------KFL--QASVGFGGSCFQ-----KDIL-NLVYICECLNLP 375 (598)
Q Consensus 316 nE~~~la~~-~gid~~ev~~~l~---~~~ri~~-------~~l--~~~~gfgg~cl~-----KD~~-~L~~~a~~~G~~ 375 (598)
+|+..++++ +|++..++.+++. ...--++ .+. ++..+|-...+. ||+. ...+.+.++|++
T Consensus 205 aEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~ 283 (497)
T 2p4q_A 205 CEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMP 283 (497)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCC
Confidence 999999999 6999999999984 2211011 011 122224444444 7765 677899999986
No 44
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.81 E-value=4.7e-19 Score=187.72 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=163.5
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~ 82 (598)
++|||+|||+|.||.++|..|++ +|++|++||+++++++.+++ +..+.+.|+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~---------------------------~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g 80 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLAR---------------------------KGQKVRLWSYESDHVDEMQAEGVNNRYLPN 80 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEECSCHHHHHHHHHHSSBTTTBTT
T ss_pred cCCeEEEECccHHHHHHHHHHHH---------------------------CCCeEEEEeCCHHHHHHHHHcCCCcccCCC
Confidence 45799999999999999999999 89999999999999999985 666667776
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC-CchH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST-VPVR 161 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST-v~~~ 161 (598)
+. ...++++++|+.+++++||+||++||+. .+++++++|.+.++++++||..+. +.++
T Consensus 81 ~~------l~~~i~~t~d~~ea~~~aDvVilaVp~~---------------~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 81 YP------FPETLKAYCDLKASLEGVTDILIVVPSF---------------AFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp CC------CCTTEEEESCHHHHHTTCCEEEECCCHH---------------HHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred Cc------cCCCeEEECCHHHHHhcCCEEEECCCHH---------------HHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 53 2356889999998999999999998753 588899999999999998876655 6666
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
+ +.+.. ++++.+ .+..+.+++.|
T Consensus 140 t-~~~se-------------------------------------------------------~i~~~l-~~~~~~vlsgP 162 (356)
T 3k96_A 140 S-RLLHE-------------------------------------------------------VVATEL-GQVPMAVISGP 162 (356)
T ss_dssp T-BCHHH-------------------------------------------------------HHHHHH-CSCCEEEEESS
T ss_pred c-cCHHH-------------------------------------------------------HHHHHc-CCCCEEEEECc
Confidence 5 33322 122211 12346688899
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHH-----------------HHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSEL-----------------SKLAA 304 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~-----------------~Kl~~ 304 (598)
.+..+.. ...|..+++|+.+. +..+.++++|....- ..+...+...+|. +|+..
T Consensus 163 ~~a~ev~----~g~pt~~via~~~~----~~~~~v~~lf~~~~~-rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~ 233 (356)
T 3k96_A 163 SLATEVA----ANLPTAVSLASNNS----QFSKDLIERLHGQRF-RVYKNDDMIGVELCGSVKNILAIATGISDGLKLGS 233 (356)
T ss_dssp CCHHHHH----TTCCEEEEEEESCH----HHHHHHHHHHCCSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred cHHHHHH----cCCCeEEEEecCCH----HHHHHHHHHhCCCCe-eEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 8865432 24566777777553 567888999985431 2233445444444 56777
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy11160 305 NAFLAQRISSINSLSAVCEATGADVSEVAKA 335 (598)
Q Consensus 305 N~~~~~~ia~~nE~~~la~~~gid~~ev~~~ 335 (598)
|+..++...+++|+.++|+++|+|+..+..+
T Consensus 234 N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl 264 (356)
T 3k96_A 234 NARAALITRGLTEMGRLVSVFGGKQETLTGL 264 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHTST
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCChHhhccc
Confidence 8888999999999999999999999987743
No 45
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.79 E-value=2.8e-18 Score=188.53 Aligned_cols=208 Identities=14% Similarity=0.152 Sum_probs=163.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.+||..|++ +|++|++||+++++++.+++...
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~---------------------------~G~~V~v~~r~~~~~~~l~~~~~-------- 59 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES---------------------------RGYTVSIFNRSREKTEEVIAENP-------- 59 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEECSSHHHHHHHHHHST--------
T ss_pred CCeEEEEccHHHHHHHHHHHHh---------------------------CCCeEEEEeCCHHHHHHHHhhCC--------
Confidence 4689999999999999999999 89999999999999998875210
Q ss_pred HHHhhhcCCceEEecCHHHHhcc---CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQK---AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~---adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
..+++.++++++++++ +|+||+|||++. .++++++++.+.++++++||+.||..+.
T Consensus 60 -------~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~--------------~v~~vl~~l~~~l~~g~iIId~s~g~~~ 118 (480)
T 2zyd_A 60 -------GKKLVPYYTVKEFVESLETPRRILLMVKAGA--------------GTDAAIDSLKPYLDKGDIIIDGGNTFFQ 118 (480)
T ss_dssp -------TSCEEECSSHHHHHHTBCSSCEEEECSCSSS--------------HHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred -------CCCeEEeCCHHHHHhCCCCCCEEEEECCCHH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence 0247788899888887 999999998753 4778888999999999999999999998
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
.++++.. .+.+ .| +.++.+|
T Consensus 119 ~t~~l~~-------------------------------------------------------~l~~---~g--~~~v~~p 138 (480)
T 2zyd_A 119 DTIRRNR-------------------------------------------------------ELSA---EG--FNFIGTG 138 (480)
T ss_dssp HHHHHHH-------------------------------------------------------HHHH---TT--CEEEEEE
T ss_pred HHHHHHH-------------------------------------------------------HHHH---CC--CCeeCCc
Confidence 8866643 1222 12 2334455
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCC--c----eEEecCchhHHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPR--K----HILTTNTWSSELSKLAANAFLAQRISSI 315 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~--~----~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~ 315 (598)
....+..+.. -| .+++||+. ++.+.++++|+.++.. + ..+++..+.+..+|+++|.+.+..+..+
T Consensus 139 v~gg~~~a~~---g~-~i~~gg~~-----~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~l 209 (480)
T 2zyd_A 139 VSGGEEGALK---GP-SIMPGGQK-----EAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLI 209 (480)
T ss_dssp EESHHHHHHH---CC-EEEEESCH-----HHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHhHHhc---CC-eEEecCCH-----HHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 5432222212 22 48889853 6789999999998742 0 4567788999999999999999999999
Q ss_pred HHHHHHHHH-cCCCHHHHHHHHc
Q psy11160 316 NSLSAVCEA-TGADVSEVAKAVG 337 (598)
Q Consensus 316 nE~~~la~~-~gid~~ev~~~l~ 337 (598)
+|+..++++ +|++..++.+++.
T Consensus 210 aEa~~l~~~~lGl~~~~~~~l~~ 232 (480)
T 2zyd_A 210 AEAYSLLKGGLNLTNEELAQTFT 232 (480)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999999 7999999999883
No 46
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.78 E-value=1.4e-17 Score=183.18 Aligned_cols=245 Identities=13% Similarity=0.120 Sum_probs=177.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|+|+|||+|.||.++|..|++ .|++|++||+++++++.++++..+ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~---------------------------~G~~V~v~dr~~~~~~~l~~~~~~----g--- 48 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND---------------------------HGFVVCAFNRTVSKVDDFLANEAK----G--- 48 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSTHHHHHHHHTTTT----T---
T ss_pred CeEEEEChHHHHHHHHHHHHH---------------------------CCCeEEEEeCCHHHHHHHHhcccc----C---
Confidence 689999999999999999999 899999999999999998864211 1
Q ss_pred HHhhhcCCceEEecCHHHHhc---cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQ---KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~---~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.++..+++++++++ ++|+||+|||++. .++++++++.+.++++++||..||..+..
T Consensus 49 -------~gi~~~~~~~e~v~~l~~aDvVilaVp~~~--------------~v~~vl~~l~~~l~~g~iII~~s~~~~~~ 107 (482)
T 2pgd_A 49 -------TKVLGAHSLEEMVSKLKKPRRIILLVKAGQ--------------AVDNFIEKLVPLLDIGDIIIDGGNSEYRD 107 (482)
T ss_dssp -------SSCEECSSHHHHHHHBCSSCEEEECSCTTH--------------HHHHHHHHHHHHCCTTCEEEECSCCCHHH
T ss_pred -------CCeEEeCCHHHHHhhccCCCEEEEeCCChH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHHH
Confidence 24667888888774 8999999998752 47778889999999999999999998887
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
++++.. .+.+ .| +.++..|.
T Consensus 108 ~~~l~~-------------------------------------------------------~l~~---~g--~~~v~~pv 127 (482)
T 2pgd_A 108 TMRRCR-------------------------------------------------------DLKD---KG--ILFVGSGV 127 (482)
T ss_dssp HHHHHH-------------------------------------------------------HHHH---TT--CEEEEEEE
T ss_pred HHHHHH-------------------------------------------------------HHHH---cC--CeEeCCCC
Confidence 765543 1221 12 22334454
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCce-------EEecCchhHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKH-------ILTTNTWSSELSKLAANAFLAQRISSI 315 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~-------v~~~~~~~Ae~~Kl~~N~~~~~~ia~~ 315 (598)
+..+-. ...++.+++||+. ++.+.++++|+.++. .. .+++..+.++.+|+++|.+.+..+.++
T Consensus 128 ~g~~~~----a~~g~~i~~gg~~-----e~~~~v~~ll~~~g~-~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i 197 (482)
T 2pgd_A 128 SGGEDG----ARYGPSLMPGGNK-----EAWPHIKAIFQGIAA-KVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLI 197 (482)
T ss_dssp ESHHHH----HHHCCEEEEEECT-----TTHHHHHHHHHHHSC-BCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhh----hccCCeEEeCCCH-----HHHHHHHHHHHHhhh-hccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHH
Confidence 322111 1122257888864 467888999998874 22 345678899999999999999999999
Q ss_pred HHHHHHHHHc-CCCHHHHHHHHc--CCcccccc-------cc---ccCccccccch------hhhHHHHHHHHHHcCCh
Q psy11160 316 NSLSAVCEAT-GADVSEVAKAVG--LDSRIGAK-------FL---QASVGFGGSCF------QKDILNLVYICECLNLP 375 (598)
Q Consensus 316 nE~~~la~~~-gid~~ev~~~l~--~~~ri~~~-------~l---~~~~gfgg~cl------~KD~~~L~~~a~~~G~~ 375 (598)
+|+..++++. |++..++.+++. +....++. .+ ++..+|-..-+ .+|...+.+.|+++|++
T Consensus 198 ~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~ 276 (482)
T 2pgd_A 198 CEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVP 276 (482)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHHhcCCCcCchHHHHHhHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCC
Confidence 9999999999 999999999985 11111110 01 11122211112 34566788999999986
No 47
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.78 E-value=1.2e-17 Score=168.70 Aligned_cols=237 Identities=10% Similarity=0.081 Sum_probs=164.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeC--CHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDK--SEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~--~~~~~~~~~~~~~~~~e~~~ 83 (598)
|||+|||+|.||.++|..|++ .|++|++||+ ++++++.+.+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~---------------------------~g~~V~~~~~~~~~~~~~~~~~~--------- 44 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRS---------------------------RGVEVVTSLEGRSPSTIERARTV--------- 44 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHH---------------------------TTCEEEECCTTCCHHHHHHHHHH---------
T ss_pred CeEEEEechHHHHHHHHHHHH---------------------------CCCeEEEeCCccCHHHHHHHHHC---------
Confidence 589999999999999999999 8999999999 88888776531
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+++ +++.+++++||+||+|||++. .++. +..+.+.+++ +|++.||+.+.++
T Consensus 45 ----------g~~--~~~~~~~~~aDvvi~~v~~~~--------------~~~~-~~~~~~~~~~--~vi~~s~~~~~~~ 95 (264)
T 1i36_A 45 ----------GVT--ETSEEDVYSCPVVISAVTPGV--------------ALGA-ARRAGRHVRG--IYVDINNISPETV 95 (264)
T ss_dssp ----------TCE--ECCHHHHHTSSEEEECSCGGG--------------HHHH-HHHHHTTCCS--EEEECSCCCHHHH
T ss_pred ----------CCc--CCHHHHHhcCCEEEEECCCHH--------------HHHH-HHHHHHhcCc--EEEEccCCCHHHH
Confidence 123 556678899999999997653 1222 3567776766 8889999999888
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEF 243 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~ 243 (598)
+.+...+ .. .| ++.+|..
T Consensus 96 ~~l~~~~-------------------------------------------------------~~---~g----~~~~~v~ 113 (264)
T 1i36_A 96 RMASSLI-------------------------------------------------------EK---GG----FVDAAIM 113 (264)
T ss_dssp HHHHHHC-------------------------------------------------------SS---SE----EEEEEEC
T ss_pred HHHHHHH-------------------------------------------------------hh---CC----eeeeeee
Confidence 7665421 11 01 1223332
Q ss_pred cCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecC-chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 244 LSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTN-TWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 244 ~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~-~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
..+..+.. -.+ +++||++ . +.+++ |+.++. .++.+++ .+.++.+|++.|++....+.+++|+..++
T Consensus 114 ~~~~~~~~--g~~--~~~~g~~------~-~~~~~-l~~~g~-~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la 180 (264)
T 1i36_A 114 GSVRRKGA--DIR--IIASGRD------A-EEFMK-LNRYGL-NIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAA 180 (264)
T ss_dssp SCHHHHGG--GCE--EEEESTT------H-HHHHG-GGGGTC-EEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccc--CCe--EEecCCc------H-HHhhh-HHHcCC-eeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111111 122 5678764 2 66778 888863 3455665 79999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHcCCcc--c---ccccc--ccCccccccchhhhHHHHHHHHHHcCCh-hHHHHHHHHHHH
Q psy11160 323 EATGADVSEVAKAVGLDSR--I---GAKFL--QASVGFGGSCFQKDILNLVYICECLNLP-EVASYWQQLYES 387 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~~r--i---~~~~l--~~~~gfgg~cl~KD~~~L~~~a~~~G~~-~~~~~~~~~i~~ 387 (598)
++.|+|.+ +.+.+..+.. . +..++ +..+|+. ..||+..+.+.+++. ++ .+.+.+.++++.
T Consensus 181 ~~~G~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~ 248 (264)
T 1i36_A 181 HRLGLEED-VLEMLEYTEGNDFRESAISRLKSSCIHARR---RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDK 248 (264)
T ss_dssp HHTTCHHH-HHHHHHTTSCSSTHHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHH
T ss_pred HHcCCcHH-HHHHHHHhcCccHHHHHHHHhcCCCCcchh---hHHHHHHHHHHHHHh-cCchHHHHHHHHHHH
Confidence 99999985 8888876531 0 01111 2233443 689999999999999 86 244444444444
No 48
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.75 E-value=4e-17 Score=179.37 Aligned_cols=247 Identities=14% Similarity=0.117 Sum_probs=176.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc--CCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS--NKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~--~~~~~~e~~~ 83 (598)
|+|+|||+|.||.++|..|++ .|++|++||+++++++.+++ |.. +.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~---------------------------~G~~V~v~dr~~~~~~~l~~~~g~~----~~- 49 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE---------------------------KGFKVAVFNRTYSKSEEFMKANASA----PF- 49 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSHHHHHHHHHHTTTS----TT-
T ss_pred CEEEEEChHHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHhcCCC----CC-
Confidence 589999999999999999999 89999999999999998875 321 11
Q ss_pred HHHHhhhcCCceEEecCHHHHhcc---CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQK---AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~---adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
..++..++++++++++ +|+||+|||++. .++++++++.+.++++++||..|+..+
T Consensus 50 --------~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~--------------~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 50 --------AGNLKAFETMEAFAASLKKPRKALILVQAGA--------------ATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp --------GGGEEECSCHHHHHHHBCSSCEEEECCCCSH--------------HHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred --------CCCeEEECCHHHHHhcccCCCEEEEecCChH--------------HHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 0236778889888774 999999998752 467788899999999999999999988
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
..++++... +.+ .| +.++..
T Consensus 108 ~~~~~l~~~-------------------------------------------------------l~~---~g--~~~v~~ 127 (478)
T 1pgj_A 108 KDQGRRAQQ-------------------------------------------------------LEA---AG--LRFLGM 127 (478)
T ss_dssp HHHHHHHHH-------------------------------------------------------HHT---TT--CEEEEE
T ss_pred HHHHHHHHH-------------------------------------------------------HHH---CC--CeEEEe
Confidence 877665531 211 11 122333
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCc------eEEecCchhHHHHHHHHHHHHHHHHHH
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRK------HILTTNTWSSELSKLAANAFLAQRISS 314 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~------~v~~~~~~~Ae~~Kl~~N~~~~~~ia~ 314 (598)
|....+-.+. ..| .+++||+. ++.+.++++|+.++... ..+++..+.+..+|+++|.+.+..+.+
T Consensus 128 pv~gg~~~a~---~g~-~i~~gg~~-----~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~ 198 (478)
T 1pgj_A 128 GISGGEEGAR---KGP-AFFPGGTL-----SVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQI 198 (478)
T ss_dssp EEESHHHHHH---HCC-EEEEEECH-----HHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCHHHHh---cCC-eEeccCCH-----HHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHH
Confidence 4322111111 112 47788853 57888999999987421 355677899999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHc----CCcc------cccccc-ccC-cc-ccccchh-----hhH-HHHHHHHHHcCCh
Q psy11160 315 INSLSAVCEATGADVSEVAKAVG----LDSR------IGAKFL-QAS-VG-FGGSCFQ-----KDI-LNLVYICECLNLP 375 (598)
Q Consensus 315 ~nE~~~la~~~gid~~ev~~~l~----~~~r------i~~~~l-~~~-~g-fgg~cl~-----KD~-~~L~~~a~~~G~~ 375 (598)
++|+..++++.|++..++.+++. .... +....+ +-. .| +-...+. ||. ..+.+.|+++|++
T Consensus 199 i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~ 278 (478)
T 1pgj_A 199 WGEVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVP 278 (478)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCC
Confidence 99999999999999999999885 2211 101111 111 12 2222222 444 6899999999986
No 49
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.75 E-value=4.3e-17 Score=179.00 Aligned_cols=246 Identities=11% Similarity=0.126 Sum_probs=176.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+++|+|||+|.||.++|..|++ .|++|++||+++++++.+.+...
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~---------------------------~G~~V~v~dr~~~~~~~l~~~~~-------- 49 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES---------------------------RGYTVAIYNRTTSKTEEVFKEHQ-------- 49 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSHHHHHHHHHHTT--------
T ss_pred CCcEEEEeeHHHHHHHHHHHHh---------------------------CCCEEEEEcCCHHHHHHHHHhCc--------
Confidence 3789999999999999999999 89999999999999998874210
Q ss_pred HHHhhhcCCceEEecCHHHHhcc---CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQK---AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~---adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
..++..+.++++++++ +|+||+|||++. .+.++++++.+.++++++||..||..+.
T Consensus 50 -------~~gi~~~~s~~e~v~~l~~aDvVilavp~~~--------------~v~~vl~~l~~~l~~g~iiId~s~~~~~ 108 (474)
T 2iz1_A 50 -------DKNLVFTKTLEEFVGSLEKPRRIMLMVQAGA--------------ATDATIKSLLPLLDIGDILIDGGNTHFP 108 (474)
T ss_dssp -------TSCEEECSSHHHHHHTBCSSCEEEECCCTTH--------------HHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred -------CCCeEEeCCHHHHHhhccCCCEEEEEccCch--------------HHHHHHHHHHhhCCCCCEEEECCCCCHH
Confidence 0246778889888876 999999998752 4677888899999999999999999888
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
.++++... +.+ .| +.++..|
T Consensus 109 ~~~~l~~~-------------------------------------------------------l~~---~g--~~~v~~p 128 (474)
T 2iz1_A 109 DTMRRNAE-------------------------------------------------------LAD---SG--INFIGTG 128 (474)
T ss_dssp HHHHHHHH-------------------------------------------------------TTT---SS--CEEEEEE
T ss_pred HHHHHHHH-------------------------------------------------------HHH---CC--CeEECCC
Confidence 77665541 111 11 2233444
Q ss_pred cccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCc-------eEEecCchhHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRK-------HILTTNTWSSELSKLAANAFLAQRISS 314 (598)
Q Consensus 242 e~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~-------~v~~~~~~~Ae~~Kl~~N~~~~~~ia~ 314 (598)
....+..+..+ | .+++||+. ++.+.++++|+.++... ..+++..+.+..+|+++|.+.+..+..
T Consensus 129 v~gg~~~a~~g---~-~i~~gg~~-----~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~ 199 (474)
T 2iz1_A 129 VSGGEKGALLG---P-SMMPGGQK-----EAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQL 199 (474)
T ss_dssp ECSHHHHHHHC---C-CEEEEECH-----HHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhhccC---C-eEEecCCH-----HHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHH
Confidence 43221111111 2 36788843 57888999999987421 345678899999999999999999999
Q ss_pred HHHHHHHHHH-cCCCHHHHHHHHc---CCcc------cccc-cc--ccCcc-ccccch-----hhhHH-HHHHHHHHcCC
Q psy11160 315 INSLSAVCEA-TGADVSEVAKAVG---LDSR------IGAK-FL--QASVG-FGGSCF-----QKDIL-NLVYICECLNL 374 (598)
Q Consensus 315 ~nE~~~la~~-~gid~~ev~~~l~---~~~r------i~~~-~l--~~~~g-fgg~cl-----~KD~~-~L~~~a~~~G~ 374 (598)
++|+..++++ +|++..++.+++. ...- +... +. ++.+| |-...+ .||.. ...+.+.++|+
T Consensus 200 laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv 279 (474)
T 2iz1_A 200 IAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGV 279 (474)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHcCC
Confidence 9999999999 8999999998884 2210 0001 11 22233 222222 26666 56788999998
Q ss_pred h
Q psy11160 375 P 375 (598)
Q Consensus 375 ~ 375 (598)
+
T Consensus 280 ~ 280 (474)
T 2iz1_A 280 P 280 (474)
T ss_dssp C
T ss_pred C
Confidence 6
No 50
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.69 E-value=5e-16 Score=161.86 Aligned_cols=253 Identities=13% Similarity=0.111 Sum_probs=167.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeC--CHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDK--SEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~--~~~~~~~~~~~~~~~~e~~~ 83 (598)
|||+|||+|.||.++|..|++ .|++|++||+ ++++++.+++....+.. +.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~---------------------------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-g~ 52 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVD---------------------------NGNEVRIWGTEFDTEILKSISAGREHPRL-GV 52 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---------------------------HCCEEEEECCGGGHHHHHHHHTTCCBTTT-TB
T ss_pred CEEEEECcCHHHHHHHHHHHh---------------------------CCCeEEEEEccCCHHHHHHHHHhCcCccc-Cc
Confidence 589999999999999999999 7999999999 99999998864321111 11
Q ss_pred HHHHhhhcCCceEEec--CHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec-CC--
Q psy11160 84 DEVVKKTRDVNLFFST--DIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS-TV-- 158 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~--~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S-Tv-- 158 (598)
. . .++.+++ ++.++++++|+||+|||++ .+.++++.+.+ ++++++||..+ ++
T Consensus 53 ~------~-~~~~~~~~~~~~~~~~~~D~vi~~v~~~---------------~~~~v~~~i~~-l~~~~~vv~~~ng~~~ 109 (335)
T 1txg_A 53 K------L-NGVEIFWPEQLEKCLENAEVVLLGVSTD---------------GVLPVMSRILP-YLKDQYIVLISKGLID 109 (335)
T ss_dssp C------C-CSEEEECGGGHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTT-TCCSCEEEECCCSEEE
T ss_pred c------c-cceEEecHHhHHHHHhcCCEEEEcCChH---------------HHHHHHHHHhc-CCCCCEEEEEcCcCcc
Confidence 0 0 2356777 8877899999999999764 36778888888 88899888776 66
Q ss_pred -chHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCC-ceee
Q psy11160 159 -PVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTN-VQFQ 236 (598)
Q Consensus 159 -~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g-~~~~ 236 (598)
+|++.+.+...+ .+.+ .+ ..+.
T Consensus 110 ~~~~~~~~l~~~~-------------------------------------------------------~~~~-g~~~~~~ 133 (335)
T 1txg_A 110 FDNSVLTVPEAVW-------------------------------------------------------RLKH-DLRERTV 133 (335)
T ss_dssp ETTEEEEHHHHHH-------------------------------------------------------TTST-TCGGGEE
T ss_pred CCCCcCccHHHHH-------------------------------------------------------HHhc-CCCCcEE
Confidence 666665544321 1100 00 0123
Q ss_pred EEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHH----------------
Q psy11160 237 ILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELS---------------- 300 (598)
Q Consensus 237 l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~---------------- 300 (598)
+...|.+...+. ...|..+++|+.+. +..+.++++|+..+. ......+...++..
T Consensus 134 ~~~~p~~~~~~~----~g~~~~~~~~~~~~----~~~~~~~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~~~~~~~ 204 (335)
T 1txg_A 134 AITGPAIAREVA----KRMPTTVVFSSPSE----SSANKMKEIFETEYF-GVEVTTDIIGTEITSALKNVYSIAIAWIRG 204 (335)
T ss_dssp EEESSCCHHHHH----TTCCEEEEEECSCH----HHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcHHHHH----ccCCcEEEEEeCCH----HHHHHHHHHhCCCcE-EEEecCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 445554432110 12334566776532 567888999987652 33445666555554
Q ss_pred -HHH-----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHH------HHHcCCccccccc---cccCccc---------cc-
Q psy11160 301 -KLA-----ANAFLAQRISSINSLSAVCEATGADVSEVA------KAVGLDSRIGAKF---LQASVGF---------GG- 355 (598)
Q Consensus 301 -Kl~-----~N~~~~~~ia~~nE~~~la~~~gid~~ev~------~~l~~~~ri~~~~---l~~~~gf---------gg- 355 (598)
|+. +|.+.+.....++|+..++++.|+|..++. +.+.+... +.+. ..++.+| ||
T Consensus 205 ~~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~~~~~~ 283 (335)
T 1txg_A 205 YESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGMLGELLGKGLSIDEAMEELERR 283 (335)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHHHHHHHHTTCCHHHHHHHHHHT
T ss_pred hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccHHHHHHHhCCCCHHHHHHHhccC
Confidence 666 788888999999999999999999987654 44433211 0000 0112223 21
Q ss_pred c-ch---hhhHHHHHHHHHHcCCh
Q psy11160 356 S-CF---QKDILNLVYICECLNLP 375 (598)
Q Consensus 356 ~-cl---~KD~~~L~~~a~~~G~~ 375 (598)
+ +. .||..++.+++++.|++
T Consensus 284 ~~~~~E~~~~~~~~~~~a~~~gv~ 307 (335)
T 1txg_A 284 GVGVVEGYKTAEKAYRLSSKINAD 307 (335)
T ss_dssp TCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CceecchHHHHHHHHHHHHHcCCC
Confidence 1 33 39999999999999987
No 51
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.69 E-value=8.9e-17 Score=161.33 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=127.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH--HHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER--IRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~--~~~~~~~~~~~~e~~ 82 (598)
.+||+|||+|.||.+||..|++ .|++|++||+++++ .+...... ....
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~---------------------------~G~~V~~~~r~~~~~~~~~~~~~~---~~~~ 68 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALAD---------------------------LGHEVTIGTRDPKATLARAEPDAM---GAPP 68 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHTCC----------CC
T ss_pred CCeEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEeCChhhhhhhhhhhhh---cchh
Confidence 4799999999999999999999 89999999999987 11110000 0000
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHH-HHHcCCCcEEEEec-----
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMI-AEIATDNKIVVEKS----- 156 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~ivv~~S----- 156 (598)
+.++... . ... .++++.+++++||+||+|||.+. +.+++..+ .+.+ ++++||+.|
T Consensus 69 ~~~~~~~-~-~~~-~~~~~~e~~~~aDvVilavp~~~---------------~~~~~~~i~~~~l-~g~ivi~~s~~~~~ 129 (245)
T 3dtt_A 69 FSQWLPE-H-PHV-HLAAFADVAAGAELVVNATEGAS---------------SIAALTAAGAENL-AGKILVDIANPLDF 129 (245)
T ss_dssp HHHHGGG-S-TTC-EEEEHHHHHHHCSEEEECSCGGG---------------HHHHHHHHCHHHH-TTSEEEECCCCEEC
T ss_pred hhHHHhh-c-Cce-eccCHHHHHhcCCEEEEccCcHH---------------HHHHHHHhhhhhc-CCCEEEECCCCCCC
Confidence 1111111 0 112 34567788999999999997642 44556667 6666 889999999
Q ss_pred ------CCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhccc
Q psy11160 157 ------TVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHK 230 (598)
Q Consensus 157 ------Tv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~ 230 (598)
|+.|++++.+.. .+++.+.. .-|+ +
T Consensus 130 ~~G~~~t~~~~~~~~~~~---------------------------~l~~~l~~-~~vv-~-------------------- 160 (245)
T 3dtt_A 130 SHGMPPTLNPVNTDSLGE---------------------------QIQRTFPE-AKVV-K-------------------- 160 (245)
T ss_dssp TTCSSCEESSCSSCCHHH---------------------------HHHHHSTT-SEEE-E--------------------
T ss_pred cCCccccccCCCCccHHH---------------------------HHHHHCCC-CeEE-E--------------------
Confidence 777766544332 11222211 1000 0
Q ss_pred CCceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHH
Q psy11160 231 TNVQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQ 310 (598)
Q Consensus 231 ~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~ 310 (598)
.+..+++|.+..+..+..+.. .++++|++. ++.+.++++|+.++....+++|+.++|..+|+++|++..+
T Consensus 161 ---~~~~~~a~v~~~~~~a~~g~~---~~~v~g~d~----~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l 230 (245)
T 3dtt_A 161 ---TLNTMNASLMVDPGRAAGGDH---SVFVSGNDA----AAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRL 230 (245)
T ss_dssp ---CSTTSCHHHHHCGGGTGGGCC---CEEEECSCH----HHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHH
T ss_pred ---eecccCHHHhcCccccCCCCe---eEEEECCCH----HHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHH
Confidence 122233444433322222222 366766542 6889999999999743457899999999999999999987
Q ss_pred HHH
Q psy11160 311 RIS 313 (598)
Q Consensus 311 ~ia 313 (598)
++.
T Consensus 231 ~~~ 233 (245)
T 3dtt_A 231 WGA 233 (245)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 52
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.69 E-value=1.2e-16 Score=169.40 Aligned_cols=256 Identities=17% Similarity=0.185 Sum_probs=164.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~~~ 84 (598)
|||+|||+|.||.++|..|++ .|++|++||+++++++.+++ +..+.+.++..
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~---------------------------~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~ 68 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSK---------------------------KCREVCVWHMNEEEVRLVNEKRENVLFLKGVQ 68 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTT---------------------------TEEEEEEECSCHHHHHHHHHHTBCTTTSTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHHcCcccccccccc
Confidence 399999999999999999999 89999999999999999875 33333444321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHH----HHHHcCC-CcEEEEec-CC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARM----IAEIATD-NKIVVEKS-TV 158 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~-~~ivv~~S-Tv 158 (598)
...++.+++++.++++++|+||+|||.+ .++++++. |.+.+++ +++||..| ++
T Consensus 69 ------~~~~~~~~~~~~~~~~~aDvVilav~~~---------------~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 69 ------LASNITFTSDVEKAYNGAEIILFVIPTQ---------------FLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp ------CCTTEEEESCHHHHHTTCSSEEECCCHH---------------HHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred ------cccceeeeCCHHHHHcCCCEEEECCChH---------------HHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 1235788889988899999999998642 47778888 8888887 88887776 67
Q ss_pred chHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEE
Q psy11160 159 PVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQIL 238 (598)
Q Consensus 159 ~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~ 238 (598)
.+.+.+.+.. .+.+.+ .+..+.+.
T Consensus 128 ~~~~~~~~~~-------------------------------------------------------~l~~~~-~~~~~~v~ 151 (366)
T 1evy_A 128 ERSTLKFPAE-------------------------------------------------------IIGEFL-PSPLLSVL 151 (366)
T ss_dssp CTTTCCCHHH-------------------------------------------------------HHTTTS-CGGGEEEE
T ss_pred CCccccCHHH-------------------------------------------------------HHHHHC-CCCcEEEE
Confidence 7765433322 111100 00123355
Q ss_pred ECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcc--cCCceEEecCchhHHHHHH--------------
Q psy11160 239 SNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHW--IPRKHILTTNTWSSELSKL-------------- 302 (598)
Q Consensus 239 ~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~--~~~~~v~~~~~~~Ae~~Kl-------------- 302 (598)
..|.+.... ....+..+++|+.+. +.++.++++|+.. +- ......+....+..|+
T Consensus 152 ~gp~~~~~~----~~g~~~~~~~~~~~~----~~~~~v~~ll~~~g~g~-~~~~~~di~~~~~~k~~~n~~~~~~~~~~~ 222 (366)
T 1evy_A 152 AGPSFAIEV----ATGVFTCVSIASADI----NVARRLQRIMSTGDRSF-VCWATTDTVGCEVASAVKNVLAIGSGVANG 222 (366)
T ss_dssp ESSCCHHHH----HTTCCEEEEEECSSH----HHHHHHHHHHSCTTSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCChHHHH----HhCCceEEEEecCCH----HHHHHHHHHhcCCCCeE-EEEEcCCchHHHHHHHHHhHHHHHHHHHhh
Confidence 566543210 112233445555432 5678889999876 41 2333445444444444
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH------H---cCC-cc---ccccccccCcccc------ccc--h
Q psy11160 303 ---AANAFLAQRISSINSLSAVCEATGADVSEVAKA------V---GLD-SR---IGAKFLQASVGFG------GSC--F 358 (598)
Q Consensus 303 ---~~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~------l---~~~-~r---i~~~~l~~~~gfg------g~c--l 358 (598)
.+|.+.++....++|+..+|++.|+|+..+.++ + ... .+ .+..+.. +..+. +.+ .
T Consensus 223 ~~~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~e~ 301 (366)
T 1evy_A 223 LGMGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGK-GLPIEEIQRTSKAVAEG 301 (366)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHT-TCCHHHHHC---CCCHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhC-CCCHHHHHHHcCCeeeh
Confidence 367778889999999999999999998655321 1 010 01 0100000 11111 223 3
Q ss_pred hhhHHHHHHHHHHcCCh
Q psy11160 359 QKDILNLVYICECLNLP 375 (598)
Q Consensus 359 ~KD~~~L~~~a~~~G~~ 375 (598)
.||..++.++++++|++
T Consensus 302 ~~~~~~v~~~a~~~gv~ 318 (366)
T 1evy_A 302 VATADPLMRLAKQLKVK 318 (366)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 59999999999999986
No 53
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.66 E-value=2.7e-15 Score=154.40 Aligned_cols=269 Identities=14% Similarity=0.053 Sum_probs=163.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCC-CCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIY-EPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~-e~~~ 83 (598)
+|||+|||+|.||.++|..|++ .|++|++||+++++++.+++....+. .++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~---------------------------~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~ 55 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQ---------------------------GGNDVTLIDQWPAHIEAIRKNGLIADFNGEE 55 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHHCEEEEETTEE
T ss_pred CCeEEEECcCHHHHHHHHHHHh---------------------------CCCcEEEEECCHHHHHHHHhCCEEEEeCCCe
Confidence 4799999999999999999999 89999999999999998875321111 1100
Q ss_pred HHHHhhhcCCceEEecCHHHH---hccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSA---IQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
...++.++++ .++ ++++|+||+|||.+ .+.++++.+.+.++++++|+..++..
T Consensus 56 -------~~~~~~~~~~-~~~~~~~~~~d~vi~~v~~~---------------~~~~v~~~l~~~l~~~~~iv~~~~g~- 111 (316)
T 2ew2_A 56 -------VVANLPIFSP-EEIDHQNEQVDLIIALTKAQ---------------QLDAMFKAIQPMITEKTYVLCLLNGL- 111 (316)
T ss_dssp -------EEECCCEECG-GGCCTTSCCCSEEEECSCHH---------------HHHHHHHHHGGGCCTTCEEEECCSSS-
T ss_pred -------eEecceeecc-hhhcccCCCCCEEEEEeccc---------------cHHHHHHHHHHhcCCCCEEEEecCCC-
Confidence 0012233332 223 34899999998643 46788889999999999988876632
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEEC
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSN 240 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~ 240 (598)
+..+.+.. .+.+..++ ....+. .
T Consensus 112 ~~~~~l~~-------------------------------~~~~~~vi--~g~~~~------------------------~ 134 (316)
T 2ew2_A 112 GHEDVLEK-------------------------------YVPKENIL--VGITMW------------------------T 134 (316)
T ss_dssp CTHHHHTT-------------------------------TSCGGGEE--EEEECC------------------------C
T ss_pred CcHHHHHH-------------------------------HcCCccEE--EEEeee------------------------e
Confidence 33333322 11111110 000000 0
Q ss_pred CcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHH-------------
Q psy11160 241 PEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAF------------- 307 (598)
Q Consensus 241 Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~------------- 307 (598)
.++..|+...+.... ++.+|... ...++..+.++++|+.++. ......+...++..|++.|..
T Consensus 135 ~~~~~p~~~~~~~~g--~~~i~~~~-~~~~~~~~~~~~ll~~~g~-~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~ 210 (316)
T 2ew2_A 135 AGLEGPGRVKLLGDG--EIELENID-PSGKKFALEVVDVFQKAGL-NPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIA 210 (316)
T ss_dssp CEEEETTEEEECSCC--CEEEEESS-GGGHHHHHHHHHHHHHTTC-CEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHH
T ss_pred eEEcCCCEEEEecCC--cEEEeecC-CCccHHHHHHHHHHHhCCC-CcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHH
Confidence 011112221111111 12222111 0123567888999998863 455567889999999999964
Q ss_pred --------HHHHHHHHHHHHHHHHHcCCCH--HHHHHHHcC----C--cc-cccccccc-CccccccchhhhHHHHHHHH
Q psy11160 308 --------LAQRISSINSLSAVCEATGADV--SEVAKAVGL----D--SR-IGAKFLQA-SVGFGGSCFQKDILNLVYIC 369 (598)
Q Consensus 308 --------~~~~ia~~nE~~~la~~~gid~--~ev~~~l~~----~--~r-i~~~~l~~-~~gfgg~cl~KD~~~L~~~a 369 (598)
.......++|+..++++.|++. ..+.+.+.. . .+ .++...+. ..|+-.. +.+|..++.+++
T Consensus 211 ~~~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~~E-~~~~~~~~~~~a 289 (316)
T 2ew2_A 211 EFGALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTE-IDYINGAVWRKG 289 (316)
T ss_dssp HHHTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCCCS-GGGTHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCCCcHHHHHHHHcCCcch-HHHHhhHHHHHH
Confidence 3567788999999999999986 456666542 1 11 11111133 4455445 789999999999
Q ss_pred HHcCCh-hHHHHHHHHHH
Q psy11160 370 ECLNLP-EVASYWQQLYE 386 (598)
Q Consensus 370 ~~~G~~-~~~~~~~~~i~ 386 (598)
++.|++ .+.+.+.++++
T Consensus 290 ~~~gv~~P~~~~~~~~~~ 307 (316)
T 2ew2_A 290 QKYNVATPFCAMLTQLVH 307 (316)
T ss_dssp HHHTCCCHHHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHHH
Confidence 999986 23333334443
No 54
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.66 E-value=7.5e-16 Score=163.97 Aligned_cols=256 Identities=16% Similarity=0.169 Sum_probs=166.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-------ceEEEEeCCHH-----HHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-------IQVTVVDKSEE-----RIRQWN 72 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~v~~~d~~~~-----~~~~~~ 72 (598)
+|||+|||+|.||.++|..|++ .| ++|++||++++ +++.++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~---------------------------~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~ 73 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGT---------------------------NAKNNYLFENEVRMWIRDEFVNGERMVDIIN 73 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHH---------------------------HHHHCTTBCSCEEEECCSCC---CCHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------cCCccCCCCCeEEEEECChhhhhHHHHHHHH
Confidence 4689999999999999999999 67 99999999998 888887
Q ss_pred c-CCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHH----HcC
Q psy11160 73 S-NKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAE----IAT 147 (598)
Q Consensus 73 ~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~ 147 (598)
+ +..+.+.++.. ...++.+++|+.+++++||+||+|||++ .+++++++|.+ .++
T Consensus 74 ~~~~~~~~~~~~~------~~~~i~~~~~~~ea~~~aDvVilav~~~---------------~~~~vl~~i~~~~~~~l~ 132 (375)
T 1yj8_A 74 NKHENTKYLKGVP------LPHNIVAHSDLASVINDADLLIFIVPCQ---------------YLESVLASIKESESIKIA 132 (375)
T ss_dssp HHCBCTTTSTTCB------CCTTEEEESSTHHHHTTCSEEEECCCHH---------------HHHHHHHHHTC---CCCC
T ss_pred hcCcccccCCccc------CcCCeEEECCHHHHHcCCCEEEEcCCHH---------------HHHHHHHHHhhhhhccCC
Confidence 5 44444545431 1235788899988899999999998742 57888888988 888
Q ss_pred CCcEEEEec-CCch--HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHH
Q psy11160 148 DNKIVVEKS-TVPV--RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNV 224 (598)
Q Consensus 148 ~~~ivv~~S-Tv~~--~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~ 224 (598)
++++||..| ++.+ ++.+.+.. .
T Consensus 133 ~~~ivvs~~~Gi~~~~~~~~~l~~-------------------------------------------------------~ 157 (375)
T 1yj8_A 133 SHAKAISLTKGFIVKKNQMKLCSN-------------------------------------------------------Y 157 (375)
T ss_dssp TTCEEEECCCSCEEETTEEECHHH-------------------------------------------------------H
T ss_pred CCCEEEEeCCccccCCccccCHHH-------------------------------------------------------H
Confidence 899888766 4555 23222221 1
Q ss_pred HhhcccCCceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHH-
Q psy11160 225 LKANHKTNVQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLA- 303 (598)
Q Consensus 225 L~~~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~- 303 (598)
+.+.+ +.++.+...|.+..+. ....+..+.+|+.+. +..+.++++|+..+- ......+....+..|++
T Consensus 158 l~~~~--~~~~~v~~gp~~a~~v----~~g~~~~~~~~~~~~----~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~l~ 226 (375)
T 1yj8_A 158 ISDFL--NIPCSALSGANIAMDV----AMENFSEATIGGNDK----DSLVIWQRVFDLPYF-KINCVNETIEVEICGALK 226 (375)
T ss_dssp HHHHS--SSCEEEEECSCCHHHH----HTTCCEEEEEECSCH----HHHHHHHHHHCBTTE-EEEEESCSHHHHHHHHHH
T ss_pred HHHHc--CCCEEEEeCCchHHHH----HhCCCeEEEEecCCH----HHHHHHHHHhCCCCe-EEEEeCCcHHHHHHHHHH
Confidence 21111 1123445555543211 112233455555432 567888999987542 23344565555555543
Q ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHH------HcC--Ccc---ccccccccC--cc
Q psy11160 304 ----------------ANAFLAQRISSINSLSAVCEAT--GADVSEVAKA------VGL--DSR---IGAKFLQAS--VG 352 (598)
Q Consensus 304 ----------------~N~~~~~~ia~~nE~~~la~~~--gid~~ev~~~------l~~--~~r---i~~~~l~~~--~g 352 (598)
+|.+.+.....++|+..++++. |+|+..+.++ +.+ ..| ++..+...+ ..
T Consensus 227 N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~~~~~~~~~g~~~~ 306 (375)
T 1yj8_A 227 NIITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAKCSAEFIKSTPKKT 306 (375)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHHHHHHHHhcCCCCC
Confidence 5668889999999999999999 6998665432 111 111 111111101 11
Q ss_pred cc--------ccch--hhhHHHHHHHHHHcCC
Q psy11160 353 FG--------GSCF--QKDILNLVYICECLNL 374 (598)
Q Consensus 353 fg--------g~cl--~KD~~~L~~~a~~~G~ 374 (598)
+. |.+. .||..++.+++++.|+
T Consensus 307 ~~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv 338 (375)
T 1yj8_A 307 WEELENEILKGQKLQGTVTLKYVYHMIKEKNM 338 (375)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhcCCcEeeHHHHHHHHHHHHHHhCC
Confidence 11 4444 7899999999999999
No 55
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.65 E-value=1.4e-15 Score=159.36 Aligned_cols=247 Identities=14% Similarity=0.158 Sum_probs=156.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
-|||+|||+|.||.++|..|++ +|++|++||+++++++.+++.....++|+..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~---------------------------~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~ 66 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHE---------------------------NGEEVILWARRKEIVDLINVSHTSPYVEESK 66 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHHHSCBTTBTTCC
T ss_pred CCcEEEECcCHHHHHHHHHHHh---------------------------CCCeEEEEeCCHHHHHHHHHhCCcccCCCCe
Confidence 4799999999999999999999 8999999999999999998532222444432
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec-CCchHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS-TVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S-Tv~~~~~ 163 (598)
.++.+++++.+ ++++|+||+|||++ .++++++.+.+ ++++||..+ ++.+.+.
T Consensus 67 --------~~~~~~~~~~~-~~~aDvVil~vk~~---------------~~~~v~~~l~~---~~~~vv~~~nGi~~~~~ 119 (335)
T 1z82_A 67 --------ITVRATNDLEE-IKKEDILVIAIPVQ---------------YIREHLLRLPV---KPSMVLNLSKGIEIKTG 119 (335)
T ss_dssp --------CCSEEESCGGG-CCTTEEEEECSCGG---------------GHHHHHTTCSS---CCSEEEECCCCCCTTTC
T ss_pred --------eeEEEeCCHHH-hcCCCEEEEECCHH---------------HHHHHHHHhCc---CCCEEEEEeCCCCCCcc
Confidence 14677888887 89999999999743 36666666544 678888777 6777655
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEF 243 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~ 243 (598)
+.+.. .+.+.+ +.++.+...|.+
T Consensus 120 ~~l~~-------------------------------------------------------~~~~~~--~~~~~~~~~P~~ 142 (335)
T 1z82_A 120 KRVSE-------------------------------------------------------IVEEIL--GCPYAVLSGPSH 142 (335)
T ss_dssp CCHHH-------------------------------------------------------HHHHHT--CCCEEEEESSCC
T ss_pred CcHHH-------------------------------------------------------HHHHHc--CCceEEEECCcc
Confidence 44433 111111 112344555544
Q ss_pred cCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHH-----------------HHHHHH
Q psy11160 244 LSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELS-----------------KLAANA 306 (598)
Q Consensus 244 ~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~-----------------Kl~~N~ 306 (598)
..+. ....|..+++|+.+ .+.++++|+..+. ......+....+.. |+.+|.
T Consensus 143 ~~~~----~~g~~~~~~~g~~~-------~~~~~~ll~~~g~-~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~ 210 (335)
T 1z82_A 143 AEEV----AKKLPTAVTLAGEN-------SKELQKRISTEYF-RVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNA 210 (335)
T ss_dssp HHHH----HTTCCEEEEEEETT-------HHHHHHHHCCSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHH----hCCCceEEEEEehh-------HHHHHHHhCCCCE-EEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchh
Confidence 3211 11223345555432 5667888876542 22333444333333 344566
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHc---------C-Ccc---ccccccccCcccc------ccch--hhhHHHH
Q psy11160 307 FLAQRISSINSLSAVCEATGADVSEVAKAVG---------L-DSR---IGAKFLQASVGFG------GSCF--QKDILNL 365 (598)
Q Consensus 307 ~~~~~ia~~nE~~~la~~~gid~~ev~~~l~---------~-~~r---i~~~~l~~~~gfg------g~cl--~KD~~~L 365 (598)
+.+....+++|+..++++.|+|...+.++.. . ..+ .+..+.. +..+. |.+. .||..++
T Consensus 211 ~~a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~-g~~~~~~~~~~g~~~e~~~~~~~v 289 (335)
T 1z82_A 211 KAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIAR-GFNPLKLLESSNQVVEGAFTVKAV 289 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHH-TCCHHHHHHTCSSCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHhC-CCCHHHHHHhcCCeeeHHHHHHHH
Confidence 6788889999999999999999987654311 0 011 1111101 11111 3333 5999999
Q ss_pred HHHHHHcCCh
Q psy11160 366 VYICECLNLP 375 (598)
Q Consensus 366 ~~~a~~~G~~ 375 (598)
.+++++.|++
T Consensus 290 ~~~a~~~gv~ 299 (335)
T 1z82_A 290 MKIAKENKID 299 (335)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHhCCC
Confidence 9999999986
No 56
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.65 E-value=1.1e-15 Score=160.86 Aligned_cols=256 Identities=14% Similarity=0.138 Sum_probs=163.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-------ceEEEEeCCHH-----HHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-------IQVTVVDKSEE-----RIRQWN 72 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~v~~~d~~~~-----~~~~~~ 72 (598)
+|||+|||+|.||.++|..|++ .| ++|++||++++ +.+.++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~---------------------------~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~ 60 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGG---------------------------NAAQLAQFDPRVTMWVFEEDIGGKKLTEIIN 60 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---------------------------HHHHCTTEEEEEEEECCCCBSSSSBHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHh---------------------------cCCcccCCCCeEEEEEcChhhhhhHHHHHHH
Confidence 3699999999999999999999 67 99999999998 888887
Q ss_pred c-CCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcE
Q psy11160 73 S-NKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKI 151 (598)
Q Consensus 73 ~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 151 (598)
+ +....+.++.. ...++.+++++.+++++||+||+|||.+ .+++++++|.+.++++++
T Consensus 61 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~aD~Vilav~~~---------------~~~~v~~~i~~~l~~~~i 119 (354)
T 1x0v_A 61 TQHENVKYLPGHK------LPPNVVAVPDVVQAAEDADILIFVVPHQ---------------FIGKICDQLKGHLKANAT 119 (354)
T ss_dssp HHSCCTTTSTTCC------CCTTEEEESSHHHHHTTCSEEEECCCGG---------------GHHHHHHHHTTCSCTTCE
T ss_pred hcCcccccCCccc------CccCeEEEcCHHHHHcCCCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCE
Confidence 4 33333333321 1235788889988899999999998753 367888899888988998
Q ss_pred EEEecC-Cc--hHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhc
Q psy11160 152 VVEKST-VP--VRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKAN 228 (598)
Q Consensus 152 vv~~ST-v~--~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~ 228 (598)
|+..++ +. |++.+.+.. .+.+.
T Consensus 120 vv~~~~Gi~~~~~~~~~l~~-------------------------------------------------------~l~~~ 144 (354)
T 1x0v_A 120 GISLIKGVDEGPNGLKLISE-------------------------------------------------------VIGER 144 (354)
T ss_dssp EEECCCCBCSSSSSCCBHHH-------------------------------------------------------HHHHH
T ss_pred EEEECCccCCCCCccccHHH-------------------------------------------------------HHHHH
Confidence 887765 43 333322221 11110
Q ss_pred ccCCceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHH-----
Q psy11160 229 HKTNVQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLA----- 303 (598)
Q Consensus 229 ~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~----- 303 (598)
+ +..+.+...|.+... . ....|..+.+|+.+. +..+.++++|+..+- ......+....+..|++
T Consensus 145 ~--~~~~~v~~gp~~a~~---v-~~g~~~~~~~~~~~~----~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~ 213 (354)
T 1x0v_A 145 L--GIPMSVLMGANIASE---V-ADEKFCETTIGCKDP----AQGQLLKELMQTPNF-RITVVQEVDTVEICGALKNVVA 213 (354)
T ss_dssp H--TCCEEEEECSCCHHH---H-HTTCCEEEEEECSSH----HHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHH
T ss_pred c--CCCEEEEECCCcHHH---H-HhcCCceEEEEECCH----HHHHHHHHHhCCCCE-EEEEcCCchHhHHHHHHHHHHH
Confidence 0 112334555544321 0 012233455565432 567888999987642 23334565556666665
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHHH------HcC--Ccc---ccccccccCcccc---
Q psy11160 304 ------------ANAFLAQRISSINSLSAVCEATGA---DVSEVAKA------VGL--DSR---IGAKFLQASVGFG--- 354 (598)
Q Consensus 304 ------------~N~~~~~~ia~~nE~~~la~~~gi---d~~ev~~~------l~~--~~r---i~~~~l~~~~gfg--- 354 (598)
+|.+.+.....++|+..+|++.|+ ++..+.++ +.+ ..| ++..+...+..+.
T Consensus 214 ~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (354)
T 1x0v_A 214 VGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEAFARTGKSIEQLE 293 (354)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcccccHHHHHHHHhcCCCHHHHH
Confidence 677888999999999999999999 87665321 111 011 1111111011111
Q ss_pred -----ccc--hhhhHHHHHHHHHHcCC
Q psy11160 355 -----GSC--FQKDILNLVYICECLNL 374 (598)
Q Consensus 355 -----g~c--l~KD~~~L~~~a~~~G~ 374 (598)
|.+ +.||..++.++++++|+
T Consensus 294 ~~~~~g~~~E~~~~~g~v~~~a~~~gv 320 (354)
T 1x0v_A 294 KELLNGQKLQGPETARELYSILQHKGL 320 (354)
T ss_dssp HHHSTTCCCHHHHHHHHHHHHHHHHTC
T ss_pred HhhcCCcEeehHHHHHHHHHHHHHhCC
Confidence 333 36889999999999999
No 57
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.64 E-value=6.4e-15 Score=153.67 Aligned_cols=212 Identities=12% Similarity=0.082 Sum_probs=140.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
++||+|||+|.||.+||..|+. +||+|++||+++++++.+.+... ..++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~---------------------------~G~~V~l~d~~~~~~~~~~~~i~----~~l~ 54 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS---------------------------GGFRVKLYDIEPRQITGALENIR----KEMK 54 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSCHHHHHHHHHHHH----HHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHHHH----HHHH
Confidence 5789999999999999999999 89999999999999888753100 0000
Q ss_pred HHHhh----------hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEE-
Q psy11160 85 EVVKK----------TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVV- 153 (598)
Q Consensus 85 ~~~~~----------~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv- 153 (598)
.+.+. ....++++++|+.+++++||+||+|||... ...+.+++++.+.++++++|+
T Consensus 55 ~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav~~aDlVieavpe~~-------------~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 55 SLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENL-------------DLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp HHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCCSCH-------------HHHHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHcCccccccchHHHhhceEEeCCHHHHHhcCCEEEEeccCCH-------------HHHHHHHHHHHhhCCCCeEEEE
Confidence 00000 001357899999999999999999997542 244667888999999999886
Q ss_pred EecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCc
Q psy11160 154 EKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNV 233 (598)
Q Consensus 154 ~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~ 233 (598)
..||+++.. ++. . +..+.+ -.
T Consensus 122 ~tS~i~~~~---la~-------------------------------~------------------------~~~~~r-~i 142 (319)
T 2dpo_A 122 SSSCLLPSK---LFT-------------------------------G------------------------LAHVKQ-CI 142 (319)
T ss_dssp CCSSCCHHH---HHT-------------------------------T------------------------CTTGGG-EE
T ss_pred eCCChHHHH---HHH-------------------------------h------------------------cCCCCC-eE
Confidence 456666532 221 0 000000 00
Q ss_pred eeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHH
Q psy11160 234 QFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRIS 313 (598)
Q Consensus 234 ~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia 313 (598)
..+.. +|....+ +. -++.|... .+++++.++++++.++. .+++++....+. ++||++. +
T Consensus 143 g~Hp~-~P~~~~~------lv---eiv~g~~t---~~e~~~~~~~l~~~lGk-~~v~v~~~~~Gf---i~Nrll~----a 201 (319)
T 2dpo_A 143 VAHPV-NPPYYIP------LV---ELVPHPET---SPATVDRTHALMRKIGQ-SPVRVLKEIDGF---VLNRLQY----A 201 (319)
T ss_dssp EEEEC-SSTTTCC------EE---EEEECTTC---CHHHHHHHHHHHHHTTC-EEEECSSCCTTT---THHHHHH----H
T ss_pred EeecC-Cchhhcc------eE---EEeCCCCC---CHHHHHHHHHHHHHcCC-EEEEECCCcCCc---hHHHHHH----H
Confidence 11222 3432211 11 25555222 23789999999999984 566665433332 5666554 4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHcCCc
Q psy11160 314 SINSLSAVCEATGADVSEVAKAVGLDS 340 (598)
Q Consensus 314 ~~nE~~~la~~~gid~~ev~~~l~~~~ 340 (598)
+++|+..++++.+++++++-+++....
T Consensus 202 ~~~EA~~l~~~g~~~~~~id~a~~~g~ 228 (319)
T 2dpo_A 202 IISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 789999999999999999999998654
No 58
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.57 E-value=1.4e-13 Score=141.82 Aligned_cols=194 Identities=15% Similarity=0.210 Sum_probs=133.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.+||+|||+|.||.+||.+|+ . |++|++||+++++++.+.+. + .+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a---------------------------G~~V~v~d~~~~~~~~~~~~---l----~~ 56 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S---------------------------KHEVVLQDVSEKALEAAREQ---I----PE 56 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T---------------------------TSEEEEECSCHHHHHHHHHH---S----CG
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c---------------------------CCEEEEEECCHHHHHHHHHH---H----HH
Confidence 378999999999999999988 3 89999999999999887643 1 00
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHH-HHHHHHHHHcCCCcEE-EEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVE-AAARMIAEIATDNKIV-VEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~iv-v~~STv~~~~ 162 (598)
+ ...+++.++|+++ +++||+||.|||.+. .++ ..+..+.+. +++++ .+.||+++..
T Consensus 57 ~-----~~~~i~~~~~~~~-~~~aDlVieavpe~~--------------~vk~~l~~~l~~~--~~~IlasntSti~~~~ 114 (293)
T 1zej_A 57 E-----LLSKIEFTTTLEK-VKDCDIVMEAVFEDL--------------NTKVEVLREVERL--TNAPLCSNTSVISVDD 114 (293)
T ss_dssp G-----GGGGEEEESSCTT-GGGCSEEEECCCSCH--------------HHHHHHHHHHHTT--CCSCEEECCSSSCHHH
T ss_pred H-----HhCCeEEeCCHHH-HcCCCEEEEcCcCCH--------------HHHHHHHHHHhcC--CCCEEEEECCCcCHHH
Confidence 1 1135788899875 899999999997653 233 344566555 88877 4788999864
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
..+... + -+. . .| .++. +|.
T Consensus 115 ~a~~~~--------------------------------------------------~-----~~r-~-~G--~Hf~-~Pv 134 (293)
T 1zej_A 115 IAERLD--------------------------------------------------S-----PSR-F-LG--VHWM-NPP 134 (293)
T ss_dssp HHTTSS--------------------------------------------------C-----GGG-E-EE--EEEC-SST
T ss_pred HHHHhh--------------------------------------------------c-----ccc-e-Ee--EEec-Ccc
Confidence 421100 0 000 0 12 2333 365
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
...+ +. -++.|.... +++++.++++++.++. .++++++. |+++|++. .+++|...++
T Consensus 135 ~~~~------lv---eiv~g~~t~---~~~~~~~~~l~~~lGk-~~v~v~d~------fi~Nrll~----~~~~EA~~l~ 191 (293)
T 1zej_A 135 HVMP------LV---EIVISRFTD---SKTVAFVEGFLRELGK-EVVVCKGQ------SLVNRFNA----AVLSEASRMI 191 (293)
T ss_dssp TTCC------EE---EEEECTTCC---HHHHHHHHHHHHHTTC-EEEEEESS------CHHHHHHH----HHHHHHHHHH
T ss_pred ccCC------EE---EEECCCCCC---HHHHHHHHHHHHHcCC-eEEEeccc------ccHHHHHH----HHHHHHHHHH
Confidence 4321 11 255554332 3789999999999874 56666643 88887765 5789999999
Q ss_pred HHcCCCHHHHHHHHcCC
Q psy11160 323 EATGADVSEVAKAVGLD 339 (598)
Q Consensus 323 ~~~gid~~ev~~~l~~~ 339 (598)
++ |++++++-+++...
T Consensus 192 ~~-Gv~~e~id~~~~~g 207 (293)
T 1zej_A 192 EE-GVRAEDVDRVWKHH 207 (293)
T ss_dssp HH-TCCHHHHHHHHHTT
T ss_pred Hh-CCCHHHHHHHHHhc
Confidence 99 88999999999764
No 59
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.57 E-value=1.5e-13 Score=141.85 Aligned_cols=211 Identities=19% Similarity=0.234 Sum_probs=135.6
Q ss_pred CCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
..++||+|||+|.||.++|..|+. .|++|++||+++++++.+.+... ..
T Consensus 13 ~~~~~I~VIG~G~mG~~iA~~la~---------------------------~G~~V~~~d~~~~~~~~~~~~i~----~~ 61 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGAGIAQVAAA---------------------------TGHTVVLVDQTEDILAKSKKGIE----ES 61 (302)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHHHH----HH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEEECCHHHHHHHHHHHH----HH
Confidence 346789999999999999999999 89999999999998886532100 00
Q ss_pred hHHHHhh--------------hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCC
Q psy11160 83 LDEVVKK--------------TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATD 148 (598)
Q Consensus 83 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 148 (598)
++.++++ ....++++++|+++++++||+||+|||.+. .....+++.+.+.+++
T Consensus 62 l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD~Vi~avp~~~-------------~~~~~v~~~l~~~~~~ 128 (302)
T 1f0y_A 62 LRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENL-------------KVKNELFKRLDKFAAE 128 (302)
T ss_dssp HHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTTSCSEEEECCCSCH-------------HHHHHHHHHHTTTSCT
T ss_pred HHHHHHcCCCCccccchhhHHHHHhceEEecCHHHhhcCCCEEEEcCcCcH-------------HHHHHHHHHHHhhCCC
Confidence 0111100 001257889999888999999999997642 2345677888888888
Q ss_pred CcEEE-EecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhh
Q psy11160 149 NKIVV-EKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKA 227 (598)
Q Consensus 149 ~~ivv-~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~ 227 (598)
+++|+ ..||+++.. ++. .+.. | +.
T Consensus 129 ~~iv~s~ts~i~~~~---l~~-------------------------------~~~~----------~-----------~~ 153 (302)
T 1f0y_A 129 HTIFASNTSSLQITS---IAN-------------------------------ATTR----------Q-----------DR 153 (302)
T ss_dssp TCEEEECCSSSCHHH---HHT-------------------------------TSSC----------G-----------GG
T ss_pred CeEEEECCCCCCHHH---HHH-------------------------------hcCC----------c-----------cc
Confidence 88876 456776643 221 0000 0 00
Q ss_pred cccCCceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHH
Q psy11160 228 NHKTNVQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAF 307 (598)
Q Consensus 228 ~~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~ 307 (598)
. .| .+. .+|....+ . ..+++|... .+++++.+.++++.++. .++.+++. .+ ++++|++
T Consensus 154 -~-~g--~h~-~~P~~~~~------~----~~i~~g~~~--~~e~~~~~~~l~~~~G~-~~v~~~~~-~g---~i~nr~l 211 (302)
T 1f0y_A 154 -F-AG--LHF-FNPVPVMK------L----VEVIKTPMT--SQKTFESLVDFSKALGK-HPVSCKDT-PG---FIVNRLL 211 (302)
T ss_dssp -E-EE--EEE-CSSTTTCC------E----EEEECCTTC--CHHHHHHHHHHHHHTTC-EEEEECSC-TT---TTHHHHH
T ss_pred -E-EE--Eec-CCCcccCc------e----EEEeCCCCC--CHHHHHHHHHHHHHcCC-ceEEecCc-cc---ccHHHHH
Confidence 0 01 111 23433211 1 123444321 23688999999999873 45555432 22 5566554
Q ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHcC
Q psy11160 308 LAQRISSINSLSAVCEATGADVSEVAKAVGL 338 (598)
Q Consensus 308 ~~~~ia~~nE~~~la~~~gid~~ev~~~l~~ 338 (598)
+.++||...++++.+++++++-+++..
T Consensus 212 ----~~~~~Ea~~l~~~g~~~~~~id~~~~~ 238 (302)
T 1f0y_A 212 ----VPYLMEAIRLYERGDASKEDIDTAMKL 238 (302)
T ss_dssp ----HHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 357899999999999999999888853
No 60
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.57 E-value=3.3e-14 Score=156.13 Aligned_cols=213 Identities=18% Similarity=0.170 Sum_probs=143.1
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCC----CCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNK----LPIY 79 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~----~~~~ 79 (598)
.++||+|||+|.||.+||..|++ .|++|++||+++++++.+.+.. ....
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~---------------------------aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~ 56 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAAS---------------------------HGHQVLLYDISAEALTRAIDGIHARLNSRV 56 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHH---------------------------CCCeEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999 8999999999999998865320 0000
Q ss_pred CCC-hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEE-EEecC
Q psy11160 80 EPG-LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIV-VEKST 157 (598)
Q Consensus 80 e~~-~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iv-v~~ST 157 (598)
+.| +.+.-......+++.+++++ ++++||+||+|||.. +...+++++++.+.+++++|+ .+.||
T Consensus 57 ~~g~~~~~~~~~~~~~i~~~~~~~-~~~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~~IlasntSt 122 (483)
T 3mog_A 57 TRGKLTAETCERTLKRLIPVTDIH-ALAAADLVIEAASER-------------LEVKKALFAQLAEVCPPQTLLTTNTSS 122 (483)
T ss_dssp TTTSSCHHHHHHHHHTEEEECCGG-GGGGCSEEEECCCCC-------------HHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred HcCCCCHHHHHHHHhceeEeCCHH-HhcCCCEEEEcCCCc-------------HHHHHHHHHHHHHhhccCcEEEecCCC
Confidence 111 00000000113578899986 799999999999754 223467788899999999988 56899
Q ss_pred CchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeE
Q psy11160 158 VPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQI 237 (598)
Q Consensus 158 v~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l 237 (598)
+++... +. .+.. | +. . .| .+.
T Consensus 123 i~i~~i---a~-------------------------------~~~~----------p-----------~~-~-ig--~hf 143 (483)
T 3mog_A 123 ISITAI---AA-------------------------------EIKN----------P-----------ER-V-AG--LHF 143 (483)
T ss_dssp SCHHHH---TT-------------------------------TSSS----------G-----------GG-E-EE--EEE
T ss_pred CCHHHH---HH-------------------------------HccC----------c-----------cc-e-EE--eee
Confidence 988532 21 0000 0 00 0 01 122
Q ss_pred EECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11160 238 LSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINS 317 (598)
Q Consensus 238 ~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE 317 (598)
++|.... +-..+++|... .+++++.+.++++.++. .++++++.. + +++||++.. ++||
T Consensus 144 -~~Pa~v~----------~Lvevv~g~~T--s~e~~~~~~~l~~~lGk-~~v~v~d~~-G---fi~Nr~l~~----~~~E 201 (483)
T 3mog_A 144 -FNPAPVM----------KLVEVVSGLAT--AAEVVEQLCELTLSWGK-QPVRCHSTP-G---FIVNRVARP----YYSE 201 (483)
T ss_dssp -CSSTTTC----------CEEEEEECSSC--CHHHHHHHHHHHHHTTC-EEEEEESCT-T---TTHHHHTHH----HHHH
T ss_pred -cChhhhC----------CeEEEecCCCC--CHHHHHHHHHHHHHhCC-EEEEEeccC-c---chHHHHHHH----HHHH
Confidence 2332211 11244566432 34788999999999984 566666432 2 788877665 7899
Q ss_pred HHHHHHHcCCCHHHHHHHHcC
Q psy11160 318 LSAVCEATGADVSEVAKAVGL 338 (598)
Q Consensus 318 ~~~la~~~gid~~ev~~~l~~ 338 (598)
...++++.++|++++-+++..
T Consensus 202 a~~l~~~g~~~~~~id~a~~~ 222 (483)
T 3mog_A 202 AWRALEEQVAAPEVIDAALRD 222 (483)
T ss_dssp HHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHh
Confidence 999999999999999999974
No 61
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.56 E-value=2e-14 Score=150.95 Aligned_cols=308 Identities=16% Similarity=0.196 Sum_probs=169.9
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcC-CCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSN-KLPIY 79 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~-~~~~~ 79 (598)
||+ +|||+|||+|.||..+|..|++ .|++|++||+++++++.+++. ...+.
T Consensus 1 mm~-~mki~iiG~G~~G~~~a~~L~~---------------------------~g~~V~~~~r~~~~~~~~~~~~~~~~~ 52 (359)
T 1bg6_A 1 MIE-SKTYAVLGLGNGGHAFAAYLAL---------------------------KGQSVLAWDIDAQRIKEIQDRGAIIAE 52 (359)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHHTSEEEE
T ss_pred CCC-cCeEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEeCCHHHHHHHHhcCCeEEe
Confidence 555 4799999999999999999999 899999999999999988752 22221
Q ss_pred CCChHHHHhhhcCCce-EEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 80 EPGLDEVVKKTRDVNL-FFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~-~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
..+++. ..++ ..+++++++++++|+||+|||++. ..++++.+.+.++++++|+...+.
T Consensus 53 ~~~~~~------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~---------------~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 53 GPGLAG------TAHPDLLTSDIGLAVKDADVILIVVPAIH---------------HASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp SSSCCE------EECCSEEESCHHHHHTTCSEEEECSCGGG---------------HHHHHHHHGGGCCTTCEEEESSCC
T ss_pred cccccc------ccccceecCCHHHHHhcCCEEEEeCCchH---------------HHHHHHHHHHhCCCCCEEEEcCCC
Confidence 111100 0122 467888888999999999987652 467778888999999988877554
Q ss_pred chHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEe-ccccchhhhhHHHHHhhcccCCceeeE
Q psy11160 159 PVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEK-STVPVRAAESIMNVLKANHKTNVQFQI 237 (598)
Q Consensus 159 ~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~e-STvP~gtt~~~~~~L~~~~~~g~~~~l 237 (598)
.+++-+ +... +.+.. +..+.+.+ .+.|.+....
T Consensus 112 ~~~~~~-~~~~---------------------------l~~~~-~~~v~~~~~~~~~~~~~~~----------------- 145 (359)
T 1bg6_A 112 TGGALE-FRKI---------------------------LRENG-APEVTIGETSSMLFTCRSE----------------- 145 (359)
T ss_dssp SSHHHH-HHHH---------------------------HHHTT-CCCCEEEEESSCSEEEECS-----------------
T ss_pred chHHHH-HHHH---------------------------HHhcC-CCCeEEEEecCCcEEEEeC-----------------
Confidence 445432 3221 11111 11222222 2333322110
Q ss_pred EECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccC-CceE--------Eec-------CchhH----
Q psy11160 238 LSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIP-RKHI--------LTT-------NTWSS---- 297 (598)
Q Consensus 238 ~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~-~~~v--------~~~-------~~~~A---- 297 (598)
.+|.. ..+..+.++.+|.......+++++.++++|..+.. .+.+ .+. +.+.+
T Consensus 146 -------gpg~v-~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~di~~k~~~nvn~~~n~~~al~~~~~~~~~~ 217 (359)
T 1bg6_A 146 -------RPGQV-TVNAIKGAMDFACLPAAKAGWALEQIGSVLPQYVAVENVLHTSLTNVNAVMHPLPTLLNAARCESGT 217 (359)
T ss_dssp -------STTEE-EEEEECSCEEEEEESGGGHHHHHHHHTTTCTTEEECSCHHHHHHCCHHHHHTHHHHHTTHHHHHTTC
T ss_pred -------CCCEE-EEEEeecceEEEeccccccHHHHHHHHHHhhhcEEcCChHhhhccCCCccccHHHHHhhhchhhcCC
Confidence 01211 11111123444432111122356666666654320 0000 000 00111
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCcc-----------cccccccc-Cc-cccccchhhh
Q psy11160 298 ELSKLA---ANAFLAQRISSINSLSAVCEATGADVSEVAKAVGLDSR-----------IGAKFLQA-SV-GFGGSCFQKD 361 (598)
Q Consensus 298 e~~Kl~---~N~~~~~~ia~~nE~~~la~~~gid~~ev~~~l~~~~r-----------i~~~~l~~-~~-gfgg~cl~KD 361 (598)
++..+. .+.........++|+..++++.|++...+.+.+..... .++.+.+. ++ .+-+..+.||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~~~~D 297 (359)
T 1bg6_A 218 PFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRYFFED 297 (359)
T ss_dssp CCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSCCHHHHHH
T ss_pred ccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccceecC
Confidence 011111 12235667788899999999999998777666553211 11111111 11 1233367888
Q ss_pred H----HHHHHHHHHcCCh-hHHHHHHHHHHHHhcc-c--CCCeEEEEeccccCCCCccc
Q psy11160 362 I----LNLVYICECLNLP-EVASYWQQLYESLFNT-V--SDKHIAILGFAFKKNTGDTR 412 (598)
Q Consensus 362 ~----~~L~~~a~~~G~~-~~~~~~~~~i~~~~~~-~--~~~~V~ilGlafK~~t~D~R 412 (598)
+ ..+.++|+++|++ .+.+.+.++++.+... . .++++..||++ +.+++|+|
T Consensus 298 ~~~~~g~~~~~a~~~gv~~P~~~~l~~~~~~~~~~~~~~~g~~~~~lgl~-~~~~~~~~ 355 (359)
T 1bg6_A 298 VSTGLVPLSELGRAVNVPTPLIDAVLDLISSLIDTDFRKEGRTLEKLGLS-GLTAAGIR 355 (359)
T ss_dssp HHTTHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTCCHHHHSCCTTTTTCT-TCCHHHHH
T ss_pred cCccHHHHHHHHHHcCCCchHHHHHHHHHHHHHCCChhhcCCCHHhcCCC-CCCHHHHH
Confidence 7 7899999999987 3444444555544321 1 36677778988 77776655
No 62
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.55 E-value=1e-13 Score=140.06 Aligned_cols=233 Identities=12% Similarity=0.059 Sum_probs=151.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCce-EEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQ-VTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.|+|+|||+|.||..+|..|+. .|++ |++||+++++.+.+.+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~---------------------------~g~~~v~~~~~~~~~~~~~~~~--------- 53 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR---------------------------KGFRIVQVYSRTEESARELAQK--------- 53 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH---------------------------HTCCEEEEECSSHHHHHHHHHH---------
T ss_pred CCeEEEEcCCHHHHHHHHHHHH---------------------------CCCeEEEEEeCCHHHHHHHHHH---------
Confidence 4799999999999999999999 7888 99999999999887642
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.++..++++.++++++|+||+|+|.+ .+.++++.+.+.++++++|+..|+..+.+.
T Consensus 54 ---------~g~~~~~~~~~~~~~~Dvvi~av~~~---------------~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 54 ---------VEAEYTTDLAEVNPYAKLYIVSLKDS---------------AFAELLQGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp ---------TTCEEESCGGGSCSCCSEEEECCCHH---------------HHHHHHHHHHTTCCTTCEEEECCTTSCGGG
T ss_pred ---------cCCceeCCHHHHhcCCCEEEEecCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCchHH
Confidence 12456778877889999999998653 357778888888889999999888766432
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEF 243 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~ 243 (598)
+.. .+.. .+ .....+|..
T Consensus 110 --l~~-------------------------------------------------------~~~~---~~--~~~~~~~~~ 127 (266)
T 3d1l_A 110 --WEG-------------------------------------------------------HVPH---YG--VFYPMQTFS 127 (266)
T ss_dssp --STT-------------------------------------------------------TCSS---EE--EEEECCCC-
T ss_pred --HHH-------------------------------------------------------HHHh---cc--CcCCceecC
Confidence 111 0110 01 111233322
Q ss_pred cCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCch---hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 244 LSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTW---SSELSKLAANAFLAQRISSINSLSA 320 (598)
Q Consensus 244 ~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~---~Ae~~Kl~~N~~~~~~ia~~nE~~~ 320 (598)
..+. ..+.+.+.++.|+++ ++++.++++++.++. .++.+++.+ ....+|+++|.. . .+..++| .
T Consensus 128 g~~~---~~~~~~~~~v~~~~~-----~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~e--a 194 (266)
T 3d1l_A 128 KQRE---VDFKEIPFFIEASST-----EDAAFLKAIASTLSN-RVYDADSEQRKSLHLAAVFTCNFT-N-HMYALAA--E 194 (266)
T ss_dssp --CC---CCCTTCCEEEEESSH-----HHHHHHHHHHHTTCS-CEEECCHHHHHHHHHHHHHHHHHH-H-HHHHHHH--H
T ss_pred CCch---hhcCCCeEEEecCCH-----HHHHHHHHHHHhcCC-cEEEeCHHHHHHHHHHHHHHHHHH-H-HHHHHHH--H
Confidence 1111 123344444446543 578889999999873 455555433 457889998873 2 3344445 3
Q ss_pred HHHHcCCCHHHHHHHHcCCccccccccccCccccccchhhhHHHHHHHHHHcC
Q psy11160 321 VCEATGADVSEVAKAVGLDSRIGAKFLQASVGFGGSCFQKDILNLVYICECLN 373 (598)
Q Consensus 321 la~~~gid~~ev~~~l~~~~ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G 373 (598)
++++.|+|.+++.+++.....-... +.+--...|+....|..-+....+.+.
T Consensus 195 l~~~~Gl~~~~~~~l~~~~~~~~~~-~~~~~~~~GP~~r~d~~~l~~~l~~l~ 246 (266)
T 3d1l_A 195 LLKKYNLPFDVMLPLIDETARKVHE-LEPKTAQTGPAIRYDENVIGNHLRMLA 246 (266)
T ss_dssp HHHHTTCCGGGGHHHHHHHHHHHHH-SCHHHHCCSTTTTTCHHHHHHHHHHTT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHh-cChhhhCCCCCccCCHHHHHHHHHHHh
Confidence 7789999999998888754321000 111112456667777776665555544
No 63
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.54 E-value=1.1e-13 Score=142.95 Aligned_cols=263 Identities=13% Similarity=0.102 Sum_probs=151.6
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-----C-ceEEEEeCCHHHHHHHHc-
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-----N-IQVTVVDKSEERIRQWNS- 73 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g-~~v~~~d~~~~~~~~~~~- 73 (598)
|.+++|||+|||+|.||.++|..|++ . | ++|++||+ +++++.+++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~---------------------------~~~~~~g~~~V~~~~r-~~~~~~l~~~ 55 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLAL---------------------------RAAATDGLLEVSWIAR-GAHLEAIRAA 55 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHH---------------------------HHHHTTSSEEEEEECC-HHHHHHHHHH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHh---------------------------CccccCCCCCEEEEEc-HHHHHHHHhc
Confidence 44556899999999999999999999 7 8 99999999 888998886
Q ss_pred CCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEE
Q psy11160 74 NKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVV 153 (598)
Q Consensus 74 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv 153 (598)
....+.++...+ ....+.++++.+ ++.++|+||+|||++. ++++++.+.+.++++++||
T Consensus 56 ~g~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~D~vil~vk~~~---------------~~~v~~~i~~~l~~~~~iv 114 (317)
T 2qyt_A 56 GGLRVVTPSRDF-----LARPTCVTDNPA-EVGTVDYILFCTKDYD---------------MERGVAEIRPMIGQNTKIL 114 (317)
T ss_dssp TSEEEECSSCEE-----EECCSEEESCHH-HHCCEEEEEECCSSSC---------------HHHHHHHHGGGEEEEEEEE
T ss_pred CCeEEEeCCCCe-----EEecceEecCcc-ccCCCCEEEEecCccc---------------HHHHHHHHHhhcCCCCEEE
Confidence 432222111000 012345566654 6789999999997652 5777888988888888887
Q ss_pred EecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCc
Q psy11160 154 EKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNV 233 (598)
Q Consensus 154 ~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~ 233 (598)
..++. ++..+.+.. .+....++ .|
T Consensus 115 ~~~nG-~~~~~~l~~-------------------------------~l~~~~v~-----------------------~g- 138 (317)
T 2qyt_A 115 PLLNG-ADIAERMRT-------------------------------YLPDTVVW-----------------------KG- 138 (317)
T ss_dssp ECSCS-SSHHHHHTT-------------------------------TSCTTTBC-----------------------EE-
T ss_pred EccCC-CCcHHHHHH-------------------------------HCCCCcEE-----------------------EE-
Confidence 76543 444433322 11111100 00
Q ss_pred eeeEEECCcccCcCchhhhcCCCCEEEEccC-CCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHH----
Q psy11160 234 QFQILSNPEFLSEGTAMTDLFNADRILIGGE-ETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFL---- 308 (598)
Q Consensus 234 ~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~-~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~---- 308 (598)
+....++. ..+|...+... ...+++|.. +.. ..+.+ .+.++|+..+. ...+.++...++..|++.|+..
T Consensus 139 -~~~~~a~~-~~pg~~~~~~~-g~~~~ig~~~~~~-~~~~~-~~~~ll~~~g~-~~~~~~di~~~~~~Kl~~N~~~~~~~ 212 (317)
T 2qyt_A 139 -CVYISARK-SAPGLITLEAD-RELFYFGSGLPEQ-TDDEV-RLAELLTAAGI-RAYNPTDIDWYIMKKFMMISVTATAT 212 (317)
T ss_dssp -EEEEEEEE-EETTEEEEEEE-EEEEEEECCSSSC-CHHHH-HHHHHHHHTTC-CEECCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -EEEEEEEE-cCCCEEEEcCC-CceEEEcCCCCCC-cCHHH-HHHHHHHHCCC-CCEEchHHHHHHHHHHHHHHhhHHHH
Confidence 01111111 11222111111 112325653 211 12345 77888887763 3445678899999999999864
Q ss_pred ---------------HHHHHHHHHHHHHHHHcCCCHH--HHHHHHcC----Ccc-ccccccccCccccccchhhhHHHHH
Q psy11160 309 ---------------AQRISSINSLSAVCEATGADVS--EVAKAVGL----DSR-IGAKFLQASVGFGGSCFQKDILNLV 366 (598)
Q Consensus 309 ---------------~~~ia~~nE~~~la~~~gid~~--ev~~~l~~----~~r-i~~~~l~~~~gfgg~cl~KD~~~L~ 366 (598)
......++|+..++++.|++.. .+.+.+.. ..+ .++...+...|+... +.-...++.
T Consensus 213 al~g~~~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~g~~~E-~~~~~g~~~ 291 (317)
T 2qyt_A 213 AYFDKPIGSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQRKMPPESTSSMHSDFLQGGSTE-VETLTGYVV 291 (317)
T ss_dssp HHHTSCHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC---------------------CTTTHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccCCCCCChHHHHHHcCCccC-HHHHhhHHH
Confidence 4566899999999999999863 44454432 111 111112222222100 111266888
Q ss_pred HHHHHcCCh
Q psy11160 367 YICECLNLP 375 (598)
Q Consensus 367 ~~a~~~G~~ 375 (598)
++++++|++
T Consensus 292 ~~a~~~gv~ 300 (317)
T 2qyt_A 292 REAEALRVD 300 (317)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 899999986
No 64
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.53 E-value=5.6e-13 Score=144.93 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=136.6
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHH--------H-HcC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQ--------W-NSN 74 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~--------~-~~~ 74 (598)
.++||+|||+|.||.+||..|+. +|++|++||+++++... + .+|
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~---------------------------aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G 105 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL---------------------------AGIETFLVVRNEQRCKQELEVMYAREKSFK 105 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEECcHHHHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999 89999999999985321 1 122
Q ss_pred CCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEE-
Q psy11160 75 KLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVV- 153 (598)
Q Consensus 75 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv- 153 (598)
.. .+...+.. ..++++++|++ ++++||+||+|||.. +...+.++++|.+.+++++|++
T Consensus 106 ~l--~~~~~~~~-----~~~i~~t~dl~-al~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~aIlas 164 (460)
T 3k6j_A 106 RL--NDKRIEKI-----NANLKITSDFH-KLSNCDLIVESVIED-------------MKLKKELFANLENICKSTCIFGT 164 (460)
T ss_dssp SC--CHHHHHHH-----HTTEEEESCGG-GCTTCSEEEECCCSC-------------HHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CC--CHHHHHHH-----hcceEEeCCHH-HHccCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCCEEEe
Confidence 11 00001111 24688999986 799999999999754 2344667889999999999985
Q ss_pred EecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCc
Q psy11160 154 EKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNV 233 (598)
Q Consensus 154 ~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~ 233 (598)
++||+++.. ++. .++. + +. . .|.
T Consensus 165 nTSsl~i~~---ia~-------------------------------~~~~-------------------p--~r-~-iG~ 187 (460)
T 3k6j_A 165 NTSSLDLNE---ISS-------------------------------VLRD-------------------P--SN-L-VGI 187 (460)
T ss_dssp CCSSSCHHH---HHT-------------------------------TSSS-------------------G--GG-E-EEE
T ss_pred cCCChhHHH---HHH-------------------------------hccC-------------------C--cc-e-EEE
Confidence 578887743 221 0000 0 00 0 111
Q ss_pred eeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHH
Q psy11160 234 QFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRIS 313 (598)
Q Consensus 234 ~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia 313 (598)
+. ++|....+ +. -|+.|... .+++++.+.++++.+++ .++.+++ ..+ .++|+++. .
T Consensus 188 --Hf-fnPv~~m~------Lv---EIv~g~~T---s~e~~~~~~~l~~~lGk-~~v~v~d-~pG---fi~Nril~----~ 243 (460)
T 3k6j_A 188 --HF-FNPANVIR------LV---EIIYGSHT---SSQAIATAFQACESIKK-LPVLVGN-CKS---FVFNRLLH----V 243 (460)
T ss_dssp --EC-CSSTTTCC------EE---EEECCSSC---CHHHHHHHHHHHHHTTC-EEEEESS-CCH---HHHHHHHH----H
T ss_pred --Ee-cchhhhCC------EE---EEEeCCCC---CHHHHHHHHHHHHHhCC-EEEEEec-ccH---HHHHHHHH----H
Confidence 11 24543211 11 25555432 24789999999999974 5666664 222 35565554 4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHc
Q psy11160 314 SINSLSAVCEATGADVSEVAKAVG 337 (598)
Q Consensus 314 ~~nE~~~la~~~gid~~ev~~~l~ 337 (598)
+++|+..++++.|++++++-+++.
T Consensus 244 ~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 244 YFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 789999999999999999999986
No 65
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.51 E-value=1.3e-13 Score=141.17 Aligned_cols=204 Identities=14% Similarity=0.132 Sum_probs=133.0
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+|+|+|||+ |.||.++|..|++ .|++|++||+++++.+.+.+. |
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~---------------------------~g~~V~~~~r~~~~~~~~~~~-------g- 55 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD---------------------------SAHHLAAIEIAPEGRDRLQGM-------G- 55 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---------------------------SSSEEEEECCSHHHHHHHHHT-------T-
T ss_pred CCEEEEECCCCHHHHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHhc-------C-
Confidence 479999999 9999999999999 899999999999999887741 1
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+..+ ++.+++++||+||+|||.+ .+.++++.+.+.++++++|+..||..+-..
T Consensus 56 -----------~~~~-~~~~~~~~aDvVi~av~~~---------------~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~ 108 (286)
T 3c24_A 56 -----------IPLT-DGDGWIDEADVVVLALPDN---------------IIEKVAEDIVPRVRPGTIVLILDAAAPYAG 108 (286)
T ss_dssp -----------CCCC-CSSGGGGTCSEEEECSCHH---------------HHHHHHHHHGGGSCTTCEEEESCSHHHHHT
T ss_pred -----------CCcC-CHHHHhcCCCEEEEcCCch---------------HHHHHHHHHHHhCCCCCEEEECCCCchhHH
Confidence 1112 4556789999999998643 367888889888999999998777653211
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEE-ECCc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQIL-SNPE 242 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~-~~Pe 242 (598)
+ ++ ...+ ..++ ..|.
T Consensus 109 --l-----------------------------------------------------------~~-~~~~--~~~v~~~P~ 124 (286)
T 3c24_A 109 --V-----------------------------------------------------------MP-ERAD--ITYFIGHPC 124 (286)
T ss_dssp --C-----------------------------------------------------------SC-CCTT--SEEEEEEEC
T ss_pred --H-----------------------------------------------------------Hh-hhCC--CeEEecCCC
Confidence 0 00 0011 1122 3343
Q ss_pred ccCc---Cc---hhhhcCC----CCEEE--EccCCCchhHHHHHHHHHHHhcccCC--ceEEecCchhHHHHHHHHHHHH
Q psy11160 243 FLSE---GT---AMTDLFN----ADRIL--IGGEETPEGYAAIESLSWVYEHWIPR--KHILTTNTWSSELSKLAANAFL 308 (598)
Q Consensus 243 ~~~~---G~---a~~~~~~----p~rv~--vGg~~~~~~~~a~~~l~~ly~~~~~~--~~v~~~~~~~Ae~~Kl~~N~~~ 308 (598)
+..+ +. ...+.+. ...++ .+++. ++++.++++|+.++.+ .++.++..+.+...|.+.|.+.
T Consensus 125 ~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~-----~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~ 199 (286)
T 3c24_A 125 HPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPE-----EHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVA 199 (286)
T ss_dssp CSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCT-----HHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTH
T ss_pred CccccccccchhhccCcccccccceeeeeccCCCH-----HHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHH
Confidence 3211 11 1222110 01122 34433 5788899999998721 2444544445555588888665
Q ss_pred HHHHHHHHH-HHHHHHHcCCCHHHHHHHHcCC
Q psy11160 309 AQRISSINS-LSAVCEATGADVSEVAKAVGLD 339 (598)
Q Consensus 309 ~~~ia~~nE-~~~la~~~gid~~ev~~~l~~~ 339 (598)
...+..+.| +...+...|+|.+++.+++...
T Consensus 200 ~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~ 231 (286)
T 3c24_A 200 MPFVETMVHAVDECADRYGIDRQAALDFMIGH 231 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 555555555 6666777799999999988654
No 66
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.51 E-value=1.4e-12 Score=132.81 Aligned_cols=195 Identities=12% Similarity=0.138 Sum_probs=129.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++|+|||+|.||..+|..|+. .|+ +|++||+++++.+.+++...
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~---------------------------~g~~~~V~~~d~~~~~~~~~~~~g~------- 47 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR---------------------------SGFKGKIYGYDINPESISKAVDLGI------- 47 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH---------------------------TTCCSEEEEECSCHHHHHHHHHTTS-------
T ss_pred cEEEEEecCHHHHHHHHHHHh---------------------------cCCCcEEEEEeCCHHHHHHHHHCCC-------
Confidence 689999999999999999999 788 99999999999887764210
Q ss_pred HHHHhhhcCCceEEecCHHHHhc-cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ-KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~-~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
....++++.++++ +||+||+|||.+ .+.++++.+.+.++++++|++.|++.+..
T Consensus 48 ----------~~~~~~~~~~~~~~~aDvVilavp~~---------------~~~~v~~~l~~~l~~~~iv~~~~~~~~~~ 102 (281)
T 2g5c_A 48 ----------IDEGTTSIAKVEDFSPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKL 102 (281)
T ss_dssp ----------CSEEESCGGGGGGTCCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEECCSCCTHH
T ss_pred ----------cccccCCHHHHhcCCCCEEEEcCCHH---------------HHHHHHHHHHhhCCCCcEEEECCCCcHHH
Confidence 1134567777888 999999998653 35677788888999999999988888766
Q ss_pred HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
.+.+...+ ..+ ++ | .+.+..++
T Consensus 103 ~~~l~~~l-------------------------------~~~---~v----~--------------------~~p~~~~~ 124 (281)
T 2g5c_A 103 VYDLENIL-------------------------------GKR---FV----G--------------------GHPIAGTE 124 (281)
T ss_dssp HHHHHHHH-------------------------------GGG---EE----C--------------------EEEECCCS
T ss_pred HHHHHHhc-------------------------------ccc---ce----e--------------------eccccCCc
Confidence 55444311 110 00 0 01112222
Q ss_pred ccCcCchhhhcCCCC-EEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNAD-RILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSLSA 320 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~-rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~ 320 (598)
...++.+..+++... .++..+.. ..+++.+.++++|+.++. ..+.+++....+.+|++.|....+.+++++.+..
T Consensus 125 ~~gp~~a~~~l~~g~~~~~~~~~~--~~~~~~~~v~~l~~~~g~-~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~ 200 (281)
T 2g5c_A 125 KSGVEYSLDNLYEGKKVILTPTKK--TDKKRLKLVKRVWEDVGG-VVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIH 200 (281)
T ss_dssp CCSGGGCCSSTTTTCEEEECCCSS--SCHHHHHHHHHHHHHTTC-EEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCChhhhhhHHhCCCCEEEecCCC--CCHHHHHHHHHHHHHcCC-EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222333333333333 34331110 113578889999999863 3334454566889999999888777888776654
No 67
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.49 E-value=2.2e-12 Score=132.01 Aligned_cols=212 Identities=14% Similarity=0.166 Sum_probs=139.0
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCC----
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKL---- 76 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~---- 76 (598)
||+ ++||+|||+|.||.++|..|+. .|++|++||+++++++.+.+...
T Consensus 1 Mm~-~~kV~VIGaG~mG~~iA~~la~---------------------------~G~~V~l~d~~~~~~~~~~~~i~~~~~ 52 (283)
T 4e12_A 1 MTG-ITNVTVLGTGVLGSQIAFQTAF---------------------------HGFAVTAYDINTDALDAAKKRFEGLAA 52 (283)
T ss_dssp CCS-CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCC-CCEEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEEeCCHHHHHHHHHHHHHHHH
Confidence 554 6799999999999999999999 89999999999999887664200
Q ss_pred -------CCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCC
Q psy11160 77 -------PIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDN 149 (598)
Q Consensus 77 -------~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 149 (598)
.+.....++.. .+++.++++.+++++||+||+|||.. +.....+++++.+.++++
T Consensus 53 ~~~~~g~~~~~~~~~~~~-----~~i~~~~~~~~~~~~aDlVi~av~~~-------------~~~~~~v~~~l~~~~~~~ 114 (283)
T 4e12_A 53 VYEKEVAGAADGAAQKAL-----GGIRYSDDLAQAVKDADLVIEAVPES-------------LDLKRDIYTKLGELAPAK 114 (283)
T ss_dssp HHHHHSTTCTTTHHHHHH-----HHCEEESCHHHHTTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTT
T ss_pred HHHHhcccCCHHHHHHHH-----cCeEEeCCHHHHhccCCEEEEeccCc-------------HHHHHHHHHHHHhhCCCC
Confidence 01111111111 24678899988899999999999753 234567788899999999
Q ss_pred cEEE-EecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhc
Q psy11160 150 KIVV-EKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKAN 228 (598)
Q Consensus 150 ~ivv-~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~ 228 (598)
++++ +.|++++.. ++.. +..+
T Consensus 115 ~il~s~tS~~~~~~---la~~-------------------------------------------------------~~~~ 136 (283)
T 4e12_A 115 TIFATNSSTLLPSD---LVGY-------------------------------------------------------TGRG 136 (283)
T ss_dssp CEEEECCSSSCHHH---HHHH-------------------------------------------------------HSCG
T ss_pred cEEEECCCCCCHHH---HHhh-------------------------------------------------------cCCC
Confidence 9988 567776532 2221 1000
Q ss_pred ccCCceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHH
Q psy11160 229 HKTNVQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFL 308 (598)
Q Consensus 229 ~~~g~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~ 308 (598)
.+ -...+. ++|....+ + ..++++... .+++++.++++++.++. .++.++....+ .++++++.
T Consensus 137 ~~-~ig~h~-~~p~~~~~------l----vevv~~~~t--~~~~~~~~~~l~~~~g~-~~v~v~~~~~g---~i~nr~~~ 198 (283)
T 4e12_A 137 DK-FLALHF-ANHVWVNN------T----AEVMGTTKT--DPEVYQQVVEFASAIGM-VPIELKKEKAG---YVLNSLLV 198 (283)
T ss_dssp GG-EEEEEE-CSSTTTSC------E----EEEEECTTS--CHHHHHHHHHHHHHTTC-EEEECSSCCTT---TTHHHHHH
T ss_pred cc-eEEEcc-CCCcccCc------e----EEEEeCCCC--CHHHHHHHHHHHHHcCC-EEEEEecCCCC---EEehHHHH
Confidence 00 001111 13432211 1 123444321 24688999999999974 45555332222 14555544
Q ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHcC
Q psy11160 309 AQRISSINSLSAVCEATGADVSEVAKAVGL 338 (598)
Q Consensus 309 ~~~ia~~nE~~~la~~~gid~~ev~~~l~~ 338 (598)
.+++|...++++.+++++++-+++..
T Consensus 199 ----~~~~ea~~l~~~g~~~~~~id~~~~~ 224 (283)
T 4e12_A 199 ----PLLDAAAELLVDGIADPETIDKTWRI 224 (283)
T ss_dssp ----HHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 57899999999999999999999864
No 68
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.46 E-value=5.4e-12 Score=131.27 Aligned_cols=194 Identities=13% Similarity=0.146 Sum_probs=127.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.||.++|..|++ .|+ +|++||+++++++.+.+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~---------------------------~G~~~~V~~~dr~~~~~~~a~~~G------- 78 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR---------------------------SGFKGKIYGYDINPESISKAVDLG------- 78 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH---------------------------TTCCSEEEEECSCHHHHHHHHHTT-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---------------------------CCCCCEEEEEECCHHHHHHHHHCC-------
Confidence 4799999999999999999999 788 9999999999988776421
Q ss_pred hHHHHhhhcCCceEEecCHHH-HhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKS-AIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.....++++++ ++++||+||+|||.. .+.++++++.+.++++++|++.+++.+.
T Consensus 79 ----------~~~~~~~~~~~~~~~~aDvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~d~~Svk~~ 133 (314)
T 3ggo_A 79 ----------IIDEGTTSIAKVEDFSPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGK 133 (314)
T ss_dssp ----------SCSEEESCTTGGGGGCCSEEEECSCGG---------------GHHHHHHHHHHHSCTTCEEEECCSCCTH
T ss_pred ----------CcchhcCCHHHHhhccCCEEEEeCCHH---------------HHHHHHHHHhhccCCCcEEEECCCCcHH
Confidence 01145678887 899999999998643 3567788999999999999999998876
Q ss_pred HHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNP 241 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~P 241 (598)
..+.+... +.... .+.+-+..|
T Consensus 134 ~~~~~~~~-------------------------------------------------------l~~~~---v~~hPm~G~ 155 (314)
T 3ggo_A 134 LVYDLENI-------------------------------------------------------LGKRF---VGGHPIAGT 155 (314)
T ss_dssp HHHHHHHH-------------------------------------------------------HGGGE---ECEEECCCC
T ss_pred HHHHHHHh-------------------------------------------------------cCCCE---EecCcccCC
Confidence 66544331 11000 000112222
Q ss_pred cccCcCchhhhcCC-CCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 242 EFLSEGTAMTDLFN-ADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINSL 318 (598)
Q Consensus 242 e~~~~G~a~~~~~~-p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE~ 318 (598)
+...+..+..+++. ...+++.+.. ..+++++.++++++.++. .++.++....-..++++..+-..+..++++.+
T Consensus 156 e~sG~~~A~~~Lf~g~~~il~~~~~--~~~~~~~~v~~l~~~~G~-~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~ 230 (314)
T 3ggo_A 156 EKSGVEYSLDNLYEGKKVILTPTKK--TDKKRLKLVKRVWEDVGG-VVEYMSPELHDYVFGVVSHLPHAVAFALVDTL 230 (314)
T ss_dssp CCCSGGGCCTTTTTTCEEEECCCTT--SCHHHHHHHHHHHHHTTC-EEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhhcCCEEEEEeCCC--CCHHHHHHHHHHHHHcCC-EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22112222223322 2234443221 123688999999999973 34445555677788888766665555555443
No 69
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.46 E-value=3.3e-13 Score=137.27 Aligned_cols=248 Identities=13% Similarity=0.096 Sum_probs=150.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|.||.++|..|++ .|++|++||+++++++.++.... .+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~---------------------------~g~~V~~~~r~~~~~~~l~~~~~----~~~-- 47 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCK---------------------------QGHEVQGWLRVPQPYCSVNLVET----DGS-- 47 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCSEEEEEEECT----TSC--
T ss_pred CeEEEECcCHHHHHHHHHHHh---------------------------CCCCEEEEEcCccceeeEEEEcC----CCc--
Confidence 589999999999999999999 89999999999876554432100 000
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
. ...... .++. ++++++|+||+|||.+ .++++++.+.+.++++++|+..++ ..+..+.
T Consensus 48 ---~-~~~~~~-~~~~-~~~~~~d~vi~~v~~~---------------~~~~v~~~l~~~l~~~~~vv~~~~-g~~~~~~ 105 (291)
T 1ks9_A 48 ---I-FNESLT-ANDP-DFLATSDLLLVTLKAW---------------QVSDAVKSLASTLPVTTPILLIHN-GMGTIEE 105 (291)
T ss_dssp ---E-EEEEEE-ESCH-HHHHTCSEEEECSCGG---------------GHHHHHHHHHTTSCTTSCEEEECS-SSCTTGG
T ss_pred ---e-eeeeee-ecCc-cccCCCCEEEEEecHH---------------hHHHHHHHHHhhCCCCCEEEEecC-CCCcHHH
Confidence 0 001122 2444 5788999999998754 267788899999988888877654 3344322
Q ss_pred HHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcccC
Q psy11160 166 IMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEFLS 245 (598)
Q Consensus 166 ~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~~~ 245 (598)
+.. .+.+ + +....+.+ .....| ...
T Consensus 106 l~~-------------------------------~~~~---~-~~g~~~~~-------------------~~~~~p-~~~ 130 (291)
T 1ks9_A 106 LQN-------------------------------IQQP---L-LMGTTTHA-------------------ARRDGN-VII 130 (291)
T ss_dssp GTT-------------------------------CCSC---E-EEEEECCE-------------------EEEETT-EEE
T ss_pred HHH-------------------------------hcCC---e-EEEEEeEc-------------------cEEcCC-EEE
Confidence 221 1111 0 00000000 012233 111
Q ss_pred cCchhhhcCCCCEEEE-ccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHH----------------
Q psy11160 246 EGTAMTDLFNADRILI-GGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFL---------------- 308 (598)
Q Consensus 246 ~G~a~~~~~~p~rv~v-Gg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~---------------- 308 (598)
....+.. .+.. +++. +.++.++++|+.++. ...+.++...+...|++.|...
T Consensus 131 --~~~~g~~---~i~~~~~~~-----~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~ 199 (291)
T 1ks9_A 131 --HVANGIT---HIGPARQQD-----GDYSYLADILQTVLP-DVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRH 199 (291)
T ss_dssp --EEECCCE---EEEESSGGG-----TTCTHHHHHHHTTSS-CEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGG
T ss_pred --Eecccce---EEccCCCCc-----chHHHHHHHHHhcCC-CCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHh
Confidence 0111111 1222 2211 346778889998863 4555678899999999999987
Q ss_pred --HHHHHHHHHHHHHHHHcCCCH--HHH----HHHHcCCc-cccccccccCccccccchhhhHHHHHHHHHHcCCh
Q psy11160 309 --AQRISSINSLSAVCEATGADV--SEV----AKAVGLDS-RIGAKFLQASVGFGGSCFQKDILNLVYICECLNLP 375 (598)
Q Consensus 309 --~~~ia~~nE~~~la~~~gid~--~ev----~~~l~~~~-ri~~~~l~~~~gfgg~cl~KD~~~L~~~a~~~G~~ 375 (598)
+.....++|+..++++.|++. .++ .+++.... ..++.+.+...|... -+..+..++.++++++|++
T Consensus 200 ~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d~~~g~~~-e~~~~~g~~~~~a~~~gv~ 274 (291)
T 1ks9_A 200 HPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHT-EIDYINGFLLRRARAHGIA 274 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHHHHTTCCC-SGGGTHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHHHHcCCcc-HHHHHHHHHHHHHHHhCCC
Confidence 788899999999999999986 454 33333221 122222222222211 2335688899999999987
No 70
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.45 E-value=1.5e-12 Score=149.54 Aligned_cols=206 Identities=16% Similarity=0.199 Sum_probs=134.2
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++||+|||+|.||.+||..|+. .|++|++||+++++++...+.. +..+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~---------------------------aG~~V~l~D~~~~~~~~~~~~i----~~~l 361 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSAS---------------------------KGTPILMKDINEHGIEQGLAEA----AKLL 361 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHH---------------------------TTCCEEEECSSHHHHHHHHHHH----HHHH
T ss_pred cCCEEEEECCChhhHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHHHH----HHHH
Confidence 46799999999999999999999 8999999999999887632110 0111
Q ss_pred HHHHhhh---------cCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEE-
Q psy11160 84 DEVVKKT---------RDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVV- 153 (598)
Q Consensus 84 ~~~~~~~---------~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv- 153 (598)
+.++++. ...++++++|+ +++++||+||+|||.+. ...+.+++++.+.+++++|++
T Consensus 362 ~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~aDlVIeaV~e~~-------------~vk~~v~~~l~~~~~~~~Ilas 427 (715)
T 1wdk_A 362 VGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGNVDLVVEAVVENP-------------KVKQAVLAEVENHVREDAILAS 427 (715)
T ss_dssp HHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGGCSEEEECCCSCH-------------HHHHHHHHHHHTTSCTTCEEEE
T ss_pred HHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCCCCEEEEcCCCCH-------------HHHHHHHHHHHhhCCCCeEEEe
Confidence 1111110 01247888898 68999999999997642 234567788999999999886
Q ss_pred EecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCc
Q psy11160 154 EKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNV 233 (598)
Q Consensus 154 ~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~ 233 (598)
++||+++.. ++. .+.. | +. . .|.
T Consensus 428 ntStl~i~~---la~-------------------------------~~~~----------~-----------~~-~-ig~ 450 (715)
T 1wdk_A 428 NTSTISISL---LAK-------------------------------ALKR----------P-----------EN-F-VGM 450 (715)
T ss_dssp CCSSSCHHH---HGG-------------------------------GCSC----------G-----------GG-E-EEE
T ss_pred CCCCCCHHH---HHH-------------------------------HhcC----------c-----------cc-e-EEE
Confidence 567777643 221 0000 0 00 0 111
Q ss_pred eeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHH
Q psy11160 234 QFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRIS 313 (598)
Q Consensus 234 ~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia 313 (598)
++ ++|....+ +. -++.|... .+++++.+.++++.++. .++++++. .+ .++++++ +.
T Consensus 451 --hf-~~P~~~~~------lv---evv~g~~t---~~e~~~~~~~l~~~lGk-~~v~v~d~-~G---fi~Nril----~~ 506 (715)
T 1wdk_A 451 --HF-FNPVHMMP------LV---EVIRGEKS---SDLAVATTVAYAKKMGK-NPIVVNDC-PG---FLVNRVL----FP 506 (715)
T ss_dssp --EC-CSSTTTCC------EE---EEEECSSC---CHHHHHHHHHHHHHTTC-EEEEEESC-TT---TTHHHHH----HH
T ss_pred --Ec-cCCcccCc------eE---EEEECCCC---CHHHHHHHHHHHHHhCC-EeEEEcCC-CC---hhhhHHH----HH
Confidence 11 24543211 11 24555432 23788999999999974 56666643 11 1344433 36
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Q psy11160 314 SINSLSAVCEATGADVSEVAKAV 336 (598)
Q Consensus 314 ~~nE~~~la~~~gid~~ev~~~l 336 (598)
++||+..+++. |+|++++-+++
T Consensus 507 ~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 507 YFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCHHHHHHHH
Confidence 78999999997 99999999998
No 71
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.43 E-value=9.4e-12 Score=124.57 Aligned_cols=97 Identities=21% Similarity=0.305 Sum_probs=76.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc----eEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI----QVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
+|||+|||+|.||.++|..|++ .|+ +|++||+++++++.+.+.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~---------------------------~g~~~~~~V~~~~r~~~~~~~~~~~------ 48 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMIN---------------------------KNIVSSNQIICSDLNTANLKNASEK------ 48 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---------------------------TTSSCGGGEEEECSCHHHHHHHHHH------
T ss_pred CCeEEEECccHHHHHHHHHHHh---------------------------CCCCCCCeEEEEeCCHHHHHHHHHH------
Confidence 3699999999999999999999 787 999999999999988631
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEE-EecCCc
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVV-EKSTVP 159 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv-~~STv~ 159 (598)
.++..++++.+++++||+||+||| |. .++++++++.+.++++++|| +.++++
T Consensus 49 ------------~g~~~~~~~~e~~~~aDvVilav~-~~--------------~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 49 ------------YGLTTTTDNNEVAKNADILILSIK-PD--------------LYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp ------------HCCEECSCHHHHHHHCSEEEECSC-TT--------------THHHHC---CCSSCTTCEEEECSCCSC
T ss_pred ------------hCCEEeCChHHHHHhCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 134567888889999999999994 32 36777888888888888777 455666
Q ss_pred hH
Q psy11160 160 VR 161 (598)
Q Consensus 160 ~~ 161 (598)
..
T Consensus 102 ~~ 103 (247)
T 3gt0_A 102 IE 103 (247)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 72
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.41 E-value=5.6e-12 Score=131.39 Aligned_cols=96 Identities=16% Similarity=0.251 Sum_probs=78.4
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC----ceEEEEeCCHH--HHHHHHcCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN----IQVTVVDKSEE--RIRQWNSNKLP 77 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~v~~~d~~~~--~~~~~~~~~~~ 77 (598)
++|||+|||+|.||.+||..|++ .| ++|++||++++ +++.+++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~---------------------------~G~~~~~~V~v~~r~~~~~~~~~l~~---- 69 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTA---------------------------AGVLAAHKIMASSPDMDLATVSALRK---- 69 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHH---------------------------TTSSCGGGEEEECSCTTSHHHHHHHH----
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---------------------------CCCCCcceEEEECCCccHHHHHHHHH----
Confidence 35799999999999999999999 77 89999999986 7777653
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
.+++.++++.+++++||+||+||| |. .+++++++|.+.++++++||..|+
T Consensus 70 ---------------~G~~~~~~~~e~~~~aDvVilav~-~~--------------~~~~vl~~l~~~l~~~~ivvs~s~ 119 (322)
T 2izz_A 70 ---------------MGVKLTPHNKETVQHSDVLFLAVK-PH--------------IIPFILDEIGADIEDRHIVVSCAA 119 (322)
T ss_dssp ---------------HTCEEESCHHHHHHHCSEEEECSC-GG--------------GHHHHHHHHGGGCCTTCEEEECCT
T ss_pred ---------------cCCEEeCChHHHhccCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEeCC
Confidence 135667788888999999999997 32 477888889888988999988764
Q ss_pred -Cch
Q psy11160 158 -VPV 160 (598)
Q Consensus 158 -v~~ 160 (598)
++.
T Consensus 120 gi~~ 123 (322)
T 2izz_A 120 GVTI 123 (322)
T ss_dssp TCCH
T ss_pred CCCH
Confidence 443
No 73
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.40 E-value=7.9e-12 Score=143.69 Aligned_cols=210 Identities=14% Similarity=0.149 Sum_probs=134.8
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCC----CCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKL----PIY 79 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~----~~~ 79 (598)
.++||+|||+|.||.+||..|+. +||+|++||+++++++...+... ...
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~---------------------------aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~ 363 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALIL---------------------------SNYPVILKEVNEKFLEAGIGRVKANLQSRV 363 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEECSSHHHHHHHHHHHHHHHHHTT
T ss_pred cCcEEEEEcCCHhhHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999 89999999999998876532100 000
Q ss_pred CCC-hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEE-EecC
Q psy11160 80 EPG-LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVV-EKST 157 (598)
Q Consensus 80 e~~-~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv-~~ST 157 (598)
+.| +.+.-......+++.++|+ +++++||+||+|||.+. ...+.+++++.+.+++++|++ ++||
T Consensus 364 ~~G~~~~~~~~~~~~~i~~~~d~-~~~~~aDlVIeaVpe~~-------------~vk~~v~~~l~~~~~~~~IlasntSt 429 (725)
T 2wtb_A 364 RKGSMSQEKFEKTMSLLKGSLDY-ESFRDVDMVIEAVIENI-------------SLKQQIFADLEKYCPQHCILASNTST 429 (725)
T ss_dssp C----CTTHHHHTTTSEEEESSS-GGGTTCSEEEECCCSCH-------------HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred hcCCCCHHHHHHHhcceEEeCCH-HHHCCCCEEEEcCcCCH-------------HHHHHHHHHHHhhCCCCcEEEeCCCC
Confidence 000 0000000112468889998 58999999999997642 234567788999999999885 4677
Q ss_pred CchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeE
Q psy11160 158 VPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQI 237 (598)
Q Consensus 158 v~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l 237 (598)
+++.+. +. .+.. | +. . .| .++
T Consensus 430 l~i~~l---a~-------------------------------~~~~----------p-----------~~-~-iG--~hf 450 (725)
T 2wtb_A 430 IDLNKI---GE-------------------------------RTKS----------Q-----------DR-I-VG--AHF 450 (725)
T ss_dssp SCHHHH---TT-------------------------------TCSC----------T-----------TT-E-EE--EEE
T ss_pred CCHHHH---HH-------------------------------HhcC----------C-----------CC-E-EE--ecC
Confidence 777432 11 0000 0 00 0 11 122
Q ss_pred EECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11160 238 LSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINS 317 (598)
Q Consensus 238 ~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE 317 (598)
++|....+ +. -|+.|... .+++++.+.++++.++. .++++++. .+ .++|+++ +.++||
T Consensus 451 -~~P~~~~~------lv---evv~g~~t---~~e~~~~~~~l~~~lGk-~~v~v~d~-~G---fi~Nril----~~~~~E 508 (725)
T 2wtb_A 451 -FSPAHIMP------LL---EIVRTNHT---SAQVIVDLLDVGKKIKK-TPVVVGNC-TG---FAVNRMF----FPYTQA 508 (725)
T ss_dssp -CSSTTTCC------EE---EEEECSSC---CHHHHHHHHHHHHHTTC-EEEEEESS-TT---TTHHHHH----HHHHHH
T ss_pred -CCCcccCc------eE---EEEECCCC---CHHHHHHHHHHHHHhCC-EEEEECCC-cc---HHHHHHH----HHHHHH
Confidence 34543211 11 24555432 23788999999999974 56666643 11 1344433 357899
Q ss_pred HHHHHHHcCCCHHHHHHHH
Q psy11160 318 LSAVCEATGADVSEVAKAV 336 (598)
Q Consensus 318 ~~~la~~~gid~~ev~~~l 336 (598)
+..+++. |+|++++-+++
T Consensus 509 a~~l~~~-G~~~e~id~~~ 526 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDRAI 526 (725)
T ss_dssp HHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHC-CCCHHHHHHHH
Confidence 9999998 99999999998
No 74
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.38 E-value=1.2e-11 Score=135.18 Aligned_cols=207 Identities=12% Similarity=0.148 Sum_probs=134.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+++|+|||+|.||.++|..|+. +|++|++||+++++++...+.. +..++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~---------------------------~G~~V~l~D~~~~~~~~~~~~i----~~~l~ 85 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR---------------------------VGISVVAVESDPKQLDAAKKII----TFTLE 85 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECSSHHHHHHHHHHH----HHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHh---------------------------CCCeEEEEECCHHHHHHHHHHH----HHHHH
Confidence 5789999999999999999999 8999999999999888765311 01122
Q ss_pred HHHhhhc-------CCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTR-------DVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~-------~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
..+.+.. ....+.++++ +++++||+||+|||.. +.....+++++.+.++++++|+. ||
T Consensus 86 ~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~aDlVIeaVpe~-------------~~~k~~v~~~l~~~~~~~~ii~s-nT 150 (463)
T 1zcj_A 86 KEASRAHQNGQASAKPKLRFSSST-KELSTVDLVVEAVFED-------------MNLKKKVFAELSALCKPGAFLCT-NT 150 (463)
T ss_dssp HHHHHHHHTTCCCCCCCEEEESCG-GGGTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEE-CC
T ss_pred HHHHcCCCCHHHHHHHHhhhcCCH-HHHCCCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCeEEEe-CC
Confidence 2221110 1224567888 5789999999999653 33456778889999999998875 77
Q ss_pred CchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeE
Q psy11160 158 VPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQI 237 (598)
Q Consensus 158 v~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l 237 (598)
..+..+ +++.. +.. .... .| .++
T Consensus 151 s~~~~~-~la~~-------------------------------~~~----------------------~~~~-ig--~hf 173 (463)
T 1zcj_A 151 SALNVD-DIASS-------------------------------TDR----------------------PQLV-IG--THF 173 (463)
T ss_dssp SSSCHH-HHHTT-------------------------------SSC----------------------GGGE-EE--EEE
T ss_pred CCcCHH-HHHHH-------------------------------hcC----------------------Ccce-EE--eec
Confidence 776655 34320 000 0000 12 222
Q ss_pred EECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11160 238 LSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAANAFLAQRISSINS 317 (598)
Q Consensus 238 ~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ia~~nE 317 (598)
. +|....+ +. -++.|... .+++++.+.++++.+++ .++++++. .+. ++++++. .+.+|
T Consensus 174 ~-~P~~~~~------lv---evv~g~~t---~~e~~~~~~~l~~~lGk-~~v~v~~~-~gf---i~Nrll~----~~~~e 231 (463)
T 1zcj_A 174 F-SPAHVMR------LL---EVIPSRYS---SPTTIATVMSLSKKIGK-IGVVVGNC-YGF---VGNRMLA----PYYNQ 231 (463)
T ss_dssp C-SSTTTCC------EE---EEEECSSC---CHHHHHHHHHHHHHTTC-EEEEBCCS-TTT---THHHHHH----HHHHH
T ss_pred C-CCcccce------eE---EEeCCCCC---CHHHHHHHHHHHHHhCC-EEEEECCC-ccH---HHHHHHH----HHHHH
Confidence 2 6654221 11 25454332 24788999999999874 55666542 221 3444333 35699
Q ss_pred HHHHHHHcCCCHHHHHHHHc
Q psy11160 318 LSAVCEATGADVSEVAKAVG 337 (598)
Q Consensus 318 ~~~la~~~gid~~ev~~~l~ 337 (598)
...+++. |++++++-+++.
T Consensus 232 a~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 232 GFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp HHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHH
Confidence 9999887 899999999996
No 75
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.37 E-value=1.2e-11 Score=124.29 Aligned_cols=194 Identities=10% Similarity=0.148 Sum_probs=125.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+|.||..++..|++ .|++|++||+++++.+.+.+..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~---------------------------~g~~v~~~~~~~~~~~~~~~~~--------- 46 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQ---------------------------TPHELIISGSSLERSKEIAEQL--------- 46 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT---------------------------SSCEEEEECSSHHHHHHHHHHH---------
T ss_pred ccEEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEECCCHHHHHHHHHHc---------
Confidence 5799999999999999999998 7899999999999998876410
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe-cCCchHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK-STVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~-STv~~~~~ 163 (598)
++..++++.++++++|+||+|+| |. .+.++++. +.++++++.. +++++.+.
T Consensus 47 ---------g~~~~~~~~~~~~~~D~Vi~~v~-~~--------------~~~~v~~~----l~~~~~vv~~~~~~~~~~l 98 (259)
T 2ahr_A 47 ---------ALPYAMSHQDLIDQVDLVILGIK-PQ--------------LFETVLKP----LHFKQPIISMAAGISLQRL 98 (259)
T ss_dssp ---------TCCBCSSHHHHHHTCSEEEECSC-GG--------------GHHHHHTT----SCCCSCEEECCTTCCHHHH
T ss_pred ---------CCEeeCCHHHHHhcCCEEEEEeC-cH--------------hHHHHHHH----hccCCEEEEeCCCCCHHHH
Confidence 12345678888899999999987 32 23343333 4477888877 46776543
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCC-ceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDN-KIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPE 242 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~-~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe 242 (598)
+++. ..+ .++ . .+|. .|.
T Consensus 99 ~~~~----------------------------------~~~~~~v--~-~~p~------------------------~~~ 117 (259)
T 2ahr_A 99 ATFV----------------------------------GQDLPLL--R-IMPN------------------------MNA 117 (259)
T ss_dssp HHHH----------------------------------CTTSCEE--E-EECC------------------------GGG
T ss_pred HHhc----------------------------------CCCCCEE--E-EcCC------------------------chH
Confidence 2211 111 110 0 1110 111
Q ss_pred ccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHH--HHHHHHHHHHHHHHHH
Q psy11160 243 FLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAA--NAFLAQRISSINSLSA 320 (598)
Q Consensus 243 ~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~--N~~~~~~ia~~nE~~~ 320 (598)
....| +..++.|+... +++++.++++|+.++ ..+.++.......+++.. |.|.. .+++.++.
T Consensus 118 ~~~~g--------~~~i~~~~~~~---~~~~~~~~~ll~~~G--~~~~~~~~~~d~~~al~g~~~~~~~---~~~~~la~ 181 (259)
T 2ahr_A 118 QILQS--------STALTGNALVS---QELQARVRDLTDSFG--STFDISEKDFDTFTALAGSSPAYIY---LFIEALAK 181 (259)
T ss_dssp GGTCE--------EEEEEECTTCC---HHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHHTTHHHHHH---HHHHHHHH
T ss_pred HHcCc--------eEEEEcCCCCC---HHHHHHHHHHHHhCC--CEEEecHHHccHHHHHhccHHHHHH---HHHHHHHH
Confidence 11111 12345554322 257888999999886 355566666777787753 33433 44556666
Q ss_pred HHHHcCCCHHHHHHHHcCC
Q psy11160 321 VCEATGADVSEVAKAVGLD 339 (598)
Q Consensus 321 la~~~gid~~ev~~~l~~~ 339 (598)
.+.+.|+|.+++.+++...
T Consensus 182 ~~~~~Gl~~~~~~~~~~~~ 200 (259)
T 2ahr_A 182 AGVKNGIPKAKALEIVTQT 200 (259)
T ss_dssp HHHHTTCCHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHH
Confidence 6889999999999988754
No 76
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.36 E-value=4e-11 Score=121.71 Aligned_cols=101 Identities=16% Similarity=0.189 Sum_probs=81.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|.||..+|..|++ .|++|++||+++++++.+++...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~---------------------------~g~~V~~~~~~~~~~~~~~~~g~--------- 44 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR---------------------------RGHYLIGVSRQQSTCEKAVERQL--------- 44 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHTTS---------
T ss_pred CEEEEEcCcHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHHhCCC---------
Confidence 589999999999999999999 88999999999999988764211
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
....++++.++ +++|+||+|||.+ .+.++++.+.+.++++++|+..|++.+...+.
T Consensus 45 --------~~~~~~~~~~~-~~~D~vi~av~~~---------------~~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~ 100 (279)
T 2f1k_A 45 --------VDEAGQDLSLL-QTAKIIFLCTPIQ---------------LILPTLEKLIPHLSPTAIVTDVASVKTAIAEP 100 (279)
T ss_dssp --------CSEEESCGGGG-TTCSEEEECSCHH---------------HHHHHHHHHGGGSCTTCEEEECCSCCHHHHHH
T ss_pred --------CccccCCHHHh-CCCCEEEEECCHH---------------HHHHHHHHHHhhCCCCCEEEECCCCcHHHHHH
Confidence 01346677777 8999999998643 46778888888899999999888887766544
Q ss_pred H
Q psy11160 166 I 166 (598)
Q Consensus 166 ~ 166 (598)
+
T Consensus 101 ~ 101 (279)
T 2f1k_A 101 A 101 (279)
T ss_dssp H
T ss_pred H
Confidence 3
No 77
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.31 E-value=1.9e-11 Score=119.01 Aligned_cols=186 Identities=13% Similarity=0.090 Sum_probs=118.7
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||+||| +|.||..+|..|++ .|++|+++|+++++.+.+.+.. .
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~---------------------------~g~~V~~~~r~~~~~~~~~~~~--------~ 45 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLAT---------------------------LGHEIVVGSRREEKAEAKAAEY--------R 45 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT---------------------------TTCEEEEEESSHHHHHHHHHHH--------H
T ss_pred CeEEEEcCCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHHh--------c
Confidence 5899999 99999999999999 8999999999999988776420 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC-CchH--
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST-VPVR-- 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST-v~~~-- 161 (598)
..+. ...+. .+++.++++++|+||+|+|.+ .++++++.+.+.+ ++++++..|+ +.+.
T Consensus 46 ~~~~---~~~~~-~~~~~~~~~~~D~Vi~~~~~~---------------~~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~ 105 (212)
T 1jay_A 46 RIAG---DASIT-GMKNEDAAEACDIAVLTIPWE---------------HAIDTARDLKNIL-REKIVVSPLVPVSRGAK 105 (212)
T ss_dssp HHHS---SCCEE-EEEHHHHHHHCSEEEECSCHH---------------HHHHHHHHTHHHH-TTSEEEECCCCEECCTT
T ss_pred cccc---cCCCC-hhhHHHHHhcCCEEEEeCChh---------------hHHHHHHHHHHHc-CCCEEEEcCCCcCcCCc
Confidence 0010 02244 356777899999999998632 3566777777777 4888888777 4421
Q ss_pred -------H--HHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCC
Q psy11160 162 -------A--AESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTN 232 (598)
Q Consensus 162 -------~--~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g 232 (598)
. ++++.. .+... .++.+
T Consensus 106 ~~~~~~g~~~~~~l~~-------------------------------~~~~~--~~v~~--------------------- 131 (212)
T 1jay_A 106 GFTYSSERSAAEIVAE-------------------------------VLESE--KVVSA--------------------- 131 (212)
T ss_dssp CCEECCSSCHHHHHHH-------------------------------HHTCS--CEEEC---------------------
T ss_pred eeecCCCCcHHHHHHH-------------------------------hCCCC--eEEEE---------------------
Confidence 1 222222 22111 11122
Q ss_pred ceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcc-cCCceEEecCchhHHHHHHHHHHHHHHH
Q psy11160 233 VQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHW-IPRKHILTTNTWSSELSKLAANAFLAQR 311 (598)
Q Consensus 233 ~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~-~~~~~v~~~~~~~Ae~~Kl~~N~~~~~~ 311 (598)
+.|.....+.... ....-.++++|++ +++.+.++++|+.+ +. ..+.+++.+.+..+|.+.|+|....
T Consensus 132 ------~~~~~~~~~~~~~-~~~~~~~~~~g~~----~~~~~~v~~l~~~~~G~-~~~~~~~~~~a~~~k~~~~~~~~~~ 199 (212)
T 1jay_A 132 ------LHTIPAARFANLD-EKFDWDVPVCGDD----DESKKVVMSLISEIDGL-RPLDAGPLSNSRLVESLTPLILNIM 199 (212)
T ss_dssp ------CTTCCHHHHHCTT-CCCCEEEEEEESC----HHHHHHHHHHHHHSTTE-EEEEEESGGGHHHHHTHHHHHHHHH
T ss_pred ------ccchHHHHhhCcC-CCCCccEEEECCc----HHHHHHHHHHHHHcCCC-CceeccchhHHHHhcchHHHHHHHH
Confidence 1132221111100 0000134566653 25788899999998 63 4567788999999999999888644
Q ss_pred H
Q psy11160 312 I 312 (598)
Q Consensus 312 i 312 (598)
.
T Consensus 200 ~ 200 (212)
T 1jay_A 200 R 200 (212)
T ss_dssp H
T ss_pred H
Confidence 3
No 78
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.31 E-value=8.7e-11 Score=120.00 Aligned_cols=107 Identities=13% Similarity=0.154 Sum_probs=84.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+|.||.++|..|+. ++.|++|++||+++++.+.+.+...
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~-------------------------~g~~~~V~~~d~~~~~~~~~~~~g~-------- 52 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR-------------------------DHPHYKIVGYNRSDRSRDIALERGI-------- 52 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-------------------------HCTTSEEEEECSSHHHHHHHHHTTS--------
T ss_pred cceEEEEeeCHHHHHHHHHHHh-------------------------CCCCcEEEEEcCCHHHHHHHHHcCC--------
Confidence 4799999999999999999998 1126899999999999988764210
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEI-ATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~ivv~~STv~~~~~ 163 (598)
....++++.+++++||+||+|||.+ .+.++++.+.+. ++++++|++.|++.++.+
T Consensus 53 ---------~~~~~~~~~~~~~~aDvVilavp~~---------------~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~ 108 (290)
T 3b1f_A 53 ---------VDEATADFKVFAALADVIILAVPIK---------------KTIDFIKILADLDLKEDVIITDAGSTKYEIV 108 (290)
T ss_dssp ---------CSEEESCTTTTGGGCSEEEECSCHH---------------HHHHHHHHHHTSCCCTTCEEECCCSCHHHHH
T ss_pred ---------cccccCCHHHhhcCCCEEEEcCCHH---------------HHHHHHHHHHhcCCCCCCEEEECCCCchHHH
Confidence 0145667777889999999998754 357778888888 889999999898888776
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
+.+..
T Consensus 109 ~~l~~ 113 (290)
T 3b1f_A 109 RAAEY 113 (290)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 79
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.29 E-value=5e-11 Score=124.76 Aligned_cols=102 Identities=23% Similarity=0.397 Sum_probs=77.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+|.||+.+|..|++ .|++|++||++ ++++.+++....+..++..
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~---------------------------~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~ 54 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL---------------------------AGEAINVLARG-ATLQALQTAGLRLTEDGAT 54 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH---------------------------TTCCEEEECCH-HHHHHHHHTCEEEEETTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEEECh-HHHHHHHHCCCEEecCCCe
Confidence 5799999999999999999999 89999999996 6778777533222222211
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
...++.+++++++ +.++|+||+|||++ .++++++.|.+.++++++|+..+
T Consensus 55 ------~~~~~~~~~~~~~-~~~~D~Vilavk~~---------------~~~~~~~~l~~~l~~~~~iv~~~ 104 (335)
T 3ghy_A 55 ------HTLPVRATHDAAA-LGEQDVVIVAVKAP---------------ALESVAAGIAPLIGPGTCVVVAM 104 (335)
T ss_dssp ------EEECCEEESCHHH-HCCCSEEEECCCHH---------------HHHHHHGGGSSSCCTTCEEEECC
T ss_pred ------EEEeeeEECCHHH-cCCCCEEEEeCCch---------------hHHHHHHHHHhhCCCCCEEEEEC
Confidence 0123567788875 68999999998753 46788888888888888877543
No 80
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.29 E-value=3.3e-11 Score=124.16 Aligned_cols=183 Identities=14% Similarity=0.159 Sum_probs=123.1
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+++|+||| +|.||.++|..|++ .|++|++||++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~---------------------------~G~~V~~~~~~~~~---------------- 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRA---------------------------SGYPISILDREDWA---------------- 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHT---------------------------TTCCEEEECTTCGG----------------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHh---------------------------CCCeEEEEECCccc----------------
Confidence 45899999 99999999999999 89999999987531
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+..+++++||+||+|||.+ .+.++++++.+.++++++|++.+++.....
T Consensus 58 ----------------~~~~~~~~aDvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~~~~svk~~~~ 106 (298)
T 2pv7_A 58 ----------------VAESILANADVVIVSVPIN---------------LTLETIERLKPYLTENMLLADLTSVKREPL 106 (298)
T ss_dssp ----------------GHHHHHTTCSEEEECSCGG---------------GHHHHHHHHGGGCCTTSEEEECCSCCHHHH
T ss_pred ----------------CHHHHhcCCCEEEEeCCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCcHHH
Confidence 3456789999999999754 367788889888999999999998877665
Q ss_pred HHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCceeeEEECCcc
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQILSNPEF 243 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~~~Pe~ 243 (598)
+.+.. .+ +..+ +...|.+
T Consensus 107 ~~~~~-------------------------------~~------------------------------~~~~-v~~hP~~ 124 (298)
T 2pv7_A 107 AKMLE-------------------------------VH------------------------------TGAV-LGLHPMF 124 (298)
T ss_dssp HHHHH-------------------------------HC------------------------------SSEE-EEEEECS
T ss_pred HHHHH-------------------------------hc------------------------------CCCE-EeeCCCC
Confidence 44332 00 0000 1112333
Q ss_pred cCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEe-cCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11160 244 LSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILT-TNTWSSELSKLAANAFLAQRISSINSLSAVC 322 (598)
Q Consensus 244 ~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~-~~~~~Ae~~Kl~~N~~~~~~ia~~nE~~~la 322 (598)
..+...+. ....++..+.+. ++.+.++++|+.++ ..+.. ......+.++++.+.-..+.+++++.+.
T Consensus 125 g~~~~~~~---g~~~~l~~~~~~----~~~~~v~~l~~~~G--~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~--- 192 (298)
T 2pv7_A 125 GADIASMA---KQVVVRCDGRFP----ERYEWLLEQIQIWG--AKIYQTNATEHDHNMTYIQALRHFSTFANGLHLS--- 192 (298)
T ss_dssp CTTCSCCT---TCEEEEEEEECG----GGTHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT---
T ss_pred CCCchhhc---CCeEEEecCCCH----HHHHHHHHHHHHcC--CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 22211111 112333333222 46778899999886 34444 4445688999998877766677766554
Q ss_pred HHcCCCHHHHHHHH
Q psy11160 323 EATGADVSEVAKAV 336 (598)
Q Consensus 323 ~~~gid~~ev~~~l 336 (598)
..|++..++.+++
T Consensus 193 -~~g~~~~~~~~la 205 (298)
T 2pv7_A 193 -KQPINLANLLALS 205 (298)
T ss_dssp -TSSCCHHHHHHTC
T ss_pred -hcCCCHHHHHhhc
Confidence 3788887766655
No 81
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.28 E-value=7.3e-11 Score=118.58 Aligned_cols=189 Identities=13% Similarity=0.126 Sum_probs=122.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC----ceEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN----IQVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
+|||+|||+|.||.++|..|++ .| ++|++||+++++ .
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~---------------------------~g~~~~~~v~~~~~~~~~-----~------- 44 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIAN---------------------------ANIIKKENLFYYGPSKKN-----T------- 44 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH---------------------------HTSSCGGGEEEECSSCCS-----S-------
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCCCCCeEEEEeCCccc-----C-------
Confidence 4799999999999999999998 67 799999998765 1
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
++..++++.+++++||+||+|||.. .++++++++.+.+++..+|.+.+++.+
T Consensus 45 -------------g~~~~~~~~~~~~~~D~vi~~v~~~---------------~~~~v~~~l~~~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 45 -------------TLNYMSSNEELARHCDIIVCAVKPD---------------IAGSVLNNIKPYLSSKLLISICGGLNI 96 (262)
T ss_dssp -------------SSEECSCHHHHHHHCSEEEECSCTT---------------THHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred -------------ceEEeCCHHHHHhcCCEEEEEeCHH---------------HHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 1345677888899999999999732 367778888888855557777888887
Q ss_pred HHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCC-ceEEEeccccchhhhhHHHHHhhcccCCceeeEE-
Q psy11160 161 RAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDN-KIVVEKSTVPVRAAESIMNVLKANHKTNVQFQIL- 238 (598)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~-~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~~l~- 238 (598)
...+++. ..+ .+ +.+.
T Consensus 97 ~~l~~~~----------------------------------~~~~~~----------------------------v~~~p 114 (262)
T 2rcy_A 97 GKLEEMV----------------------------------GSENKI----------------------------VWVMP 114 (262)
T ss_dssp HHHHHHH----------------------------------CTTSEE----------------------------EEEEC
T ss_pred HHHHHHh----------------------------------CCCCcE----------------------------EEECC
Confidence 5432211 111 00 0011
Q ss_pred ECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecCchhHHHHHHHH--HHHHHHHHHHHH
Q psy11160 239 SNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTNTWSSELSKLAA--NAFLAQRISSIN 316 (598)
Q Consensus 239 ~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~~~~Ae~~Kl~~--N~~~~~~ia~~n 316 (598)
..|.....| + .++.++... .+++++.++++|+.++ ..+.++.......+++.. |.+. ..++.
T Consensus 115 ~~p~~~~~g--------~-~~~~~~~~~--~~~~~~~~~~ll~~~G--~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~ 178 (262)
T 2rcy_A 115 NTPCLVGEG--------S-FIYCSNKNV--NSTDKKYVNDIFNSCG--IIHEIKEKDMDIATAISGCGPAYV---YLFIE 178 (262)
T ss_dssp CGGGGGTCE--------E-EEEEECTTC--CHHHHHHHHHHHHTSE--EEEECCGGGHHHHHHHTTSHHHHH---HHHHH
T ss_pred ChHHHHcCC--------e-EEEEeCCCC--CHHHHHHHHHHHHhCC--CEEEeCHHHccHHHHHHccHHHHH---HHHHH
Confidence 112111111 1 234444321 2367888999999887 355555444555666643 4444 33444
Q ss_pred HHHHHHHHcCCCHHHHHHHHcC
Q psy11160 317 SLSAVCEATGADVSEVAKAVGL 338 (598)
Q Consensus 317 E~~~la~~~gid~~ev~~~l~~ 338 (598)
.+...+.+.|++.+++.+++..
T Consensus 179 al~~~~~~~Gl~~~~~~~~~~~ 200 (262)
T 2rcy_A 179 SLIDAGVKNGLSRELSKNLVLQ 200 (262)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 4455578899999888887754
No 82
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.25 E-value=6e-11 Score=119.25 Aligned_cols=91 Identities=13% Similarity=0.300 Sum_probs=72.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-ceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-IQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||+|||+|.||..+|..|++ .| ++|++||+++++.+.+.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~---------------------------~g~~~v~~~~r~~~~~~~~~~~---------- 43 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVK---------------------------QGGYRIYIANRGAEKRERLEKE---------- 43 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HCSCEEEEECSSHHHHHHHHHH----------
T ss_pred CEEEEECchHHHHHHHHHHHH---------------------------CCCCeEEEECCCHHHHHHHHHh----------
Confidence 589999999999999999999 78 9999999999999987642
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe-cCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK-STVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~-STv~~ 160 (598)
.++..++++.+++ ++|+||+||| |. .++++++.+.+ + +++|+.. |++++
T Consensus 44 --------~g~~~~~~~~~~~-~~D~vi~~v~-~~--------------~~~~v~~~l~~--~-~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 44 --------LGVETSATLPELH-SDDVLILAVK-PQ--------------DMEAACKNIRT--N-GALVLSVAAGLSV 93 (263)
T ss_dssp --------TCCEEESSCCCCC-TTSEEEECSC-HH--------------HHHHHHTTCCC--T-TCEEEECCTTCCH
T ss_pred --------cCCEEeCCHHHHh-cCCEEEEEeC-ch--------------hHHHHHHHhcc--C-CCEEEEecCCCCH
Confidence 0245566776778 9999999987 42 35666655544 4 7888877 77876
No 83
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.25 E-value=3.3e-10 Score=115.81 Aligned_cols=96 Identities=14% Similarity=0.279 Sum_probs=78.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc---eEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI---QVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+|||+|||+|.||.++|..|++ .|+ +|++||+++++.+.+.+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~---------------------------~g~~~~~V~v~dr~~~~~~~l~~~------- 48 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA---------------------------NGYDPNRICVTNRSLDKLDFFKEK------- 48 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH---------------------------TTCCGGGEEEECSSSHHHHHHHHT-------
T ss_pred CCEEEEEcccHHHHHHHHHHHH---------------------------CCCCCCeEEEEeCCHHHHHHHHHH-------
Confidence 4799999999999999999999 777 999999999999988753
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCcEEEE-ecCCc
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEI-ATDNKIVVE-KSTVP 159 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~ivv~-~STv~ 159 (598)
-++..+++..+++++||+||+|||.. .+.+++++|.+. ++++++|+. .+.++
T Consensus 49 -----------~gi~~~~~~~~~~~~aDvVilav~p~---------------~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 49 -----------CGVHTTQDNRQGALNADVVVLAVKPH---------------QIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -----------TCCEEESCHHHHHSSCSEEEECSCGG---------------GHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -----------cCCEEeCChHHHHhcCCeEEEEeCHH---------------HHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 13567788888999999999999531 367888899988 888877663 34444
Q ss_pred h
Q psy11160 160 V 160 (598)
Q Consensus 160 ~ 160 (598)
.
T Consensus 103 ~ 103 (280)
T 3tri_A 103 T 103 (280)
T ss_dssp H
T ss_pred H
Confidence 3
No 84
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.23 E-value=7.1e-10 Score=115.26 Aligned_cols=102 Identities=20% Similarity=0.282 Sum_probs=77.7
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+|||+|||+|.||+.+|..|++ .|++|++| +++++++.+++....+..++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~---------------------------~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~ 69 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR---------------------------AGHEVILI-ARPQHVQAIEATGLRLETQSF 69 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH---------------------------TTCEEEEE-CCHHHHHHHHHHCEEEECSSC
T ss_pred cCCcEEEECcCHHHHHHHHHHHH---------------------------CCCeEEEE-EcHhHHHHHHhCCeEEEcCCC
Confidence 35899999999999999999999 89999999 999999998853222222222
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK 155 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ 155 (598)
. ...++.++++++ .+.++|+||+|||+. .++++++.|.+.++++++||..
T Consensus 70 ~------~~~~~~~~~~~~-~~~~~D~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 70 D------EQVKVSASSDPS-AVQGADLVLFCVKST---------------DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp E------EEECCEEESCGG-GGTTCSEEEECCCGG---------------GHHHHHHHHTTTSCTTCEEEEE
T ss_pred c------EEEeeeeeCCHH-HcCCCCEEEEEcccc---------------cHHHHHHHHHHhcCCCCEEEEe
Confidence 1 112456778875 478999999998764 3678889999999988877643
No 85
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.18 E-value=2.6e-10 Score=119.79 Aligned_cols=101 Identities=16% Similarity=0.271 Sum_probs=81.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
++||+|||+|.||.++|..|++ .|++|++||+++++.+.+.+-
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~---------------------------~G~~V~~~dr~~~~~~~a~~~---------- 50 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA---------------------------ANHSVFGYNRSRSGAKSAVDE---------- 50 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSCHHHHHHHHHT----------
T ss_pred CCEEEEEeecHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHc----------
Confidence 5799999999999999999999 899999999999998876642
Q ss_pred HHHhhhcCCceEEecCHHHHhcc----CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQK----AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~----adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
++..+.++.+++++ ||+||+|||.. .+.++++.+.+. +++++|++.|++..
T Consensus 51 ---------G~~~~~~~~e~~~~a~~~aDlVilavP~~---------------~~~~vl~~l~~~-~~~~iv~Dv~Svk~ 105 (341)
T 3ktd_A 51 ---------GFDVSADLEATLQRAAAEDALIVLAVPMT---------------AIDSLLDAVHTH-APNNGFTDVVSVKT 105 (341)
T ss_dssp ---------TCCEESCHHHHHHHHHHTTCEEEECSCHH---------------HHHHHHHHHHHH-CTTCCEEECCSCSH
T ss_pred ---------CCeeeCCHHHHHHhcccCCCEEEEeCCHH---------------HHHHHHHHHHcc-CCCCEEEEcCCCCh
Confidence 12345677766654 79999998732 467788888886 88999999999988
Q ss_pred HHHHHHH
Q psy11160 161 RAAESIM 167 (598)
Q Consensus 161 ~~~~~~~ 167 (598)
...+.+.
T Consensus 106 ~i~~~~~ 112 (341)
T 3ktd_A 106 AVYDAVK 112 (341)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665543
No 86
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.16 E-value=1.6e-10 Score=113.05 Aligned_cols=73 Identities=22% Similarity=0.300 Sum_probs=61.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.|+|+|||+|.||.++|..|++ .|++|++||++++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~---------------------------~g~~V~~~~~~~~------------------ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEI---------------------------AGHEVTYYGSKDQ------------------ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECTTCC------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEcCCHH------------------
Confidence 5799999999999999999999 8999999998643
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
++++||+||+|||.+ .++++++.+.+.++ +++|+..|+
T Consensus 54 -------------------~~~~aD~vi~av~~~---------------~~~~v~~~l~~~~~-~~~vi~~~~ 91 (209)
T 2raf_A 54 -------------------ATTLGEIVIMAVPYP---------------ALAALAKQYATQLK-GKIVVDITN 91 (209)
T ss_dssp -------------------CSSCCSEEEECSCHH---------------HHHHHHHHTHHHHT-TSEEEECCC
T ss_pred -------------------HhccCCEEEEcCCcH---------------HHHHHHHHHHHhcC-CCEEEEECC
Confidence 356899999999732 46778888888888 889888777
No 87
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.14 E-value=3.6e-09 Score=109.90 Aligned_cols=209 Identities=13% Similarity=0.073 Sum_probs=136.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcC----------
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSN---------- 74 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~---------- 74 (598)
..||+|||+|.||..+|..++. +|++|+++|++++.++...+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~---------------------------~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~ 58 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS---------------------------GGFRVKLYDIEPRQITGALENIRKEMKSLQQ 58 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHh---------------------------CCCeEEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999 899999999999876643211
Q ss_pred CCCCCC-CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEE-
Q psy11160 75 KLPIYE-PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIV- 152 (598)
Q Consensus 75 ~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iv- 152 (598)
...+.. ...++.+ .+++.++|+.+++++||+|+-+||.. ++.=++++++|.+.+++++|+
T Consensus 59 ~g~~~~~~~~~~~l-----~~i~~~~~l~~a~~~ad~ViEav~E~-------------l~iK~~lf~~l~~~~~~~aIla 120 (319)
T 3ado_A 59 SGSLKGSLSAEEQL-----SLISSCTNLAEAVEGVVHIQECVPEN-------------LDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp TTCCCSSSCHHHHH-----HTEEEECCHHHHTTTEEEEEECCCSC-------------HHHHHHHHHHHHTTCCSSSEEE
T ss_pred cCCCCCccCHHHHH-----hhcccccchHhHhccCcEEeeccccH-------------HHHHHHHHHHHHHHhhhcceee
Confidence 001111 1122222 35889999999999999999999753 334467889999999999988
Q ss_pred EEecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCC
Q psy11160 153 VEKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTN 232 (598)
Q Consensus 153 v~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g 232 (598)
-++|++++... +. .++ + .+.. .|
T Consensus 121 SNTSsl~is~i---a~-------------------------------~~~----------------~------p~r~-ig 143 (319)
T 3ado_A 121 SSSSCLLPSKL---FT-------------------------------GLA----------------H------VKQC-IV 143 (319)
T ss_dssp ECCSSCCHHHH---HT-------------------------------TCT----------------T------GGGE-EE
T ss_pred hhhhhccchhh---hh-------------------------------hcc----------------C------CCcE-EE
Confidence 45566666332 11 000 0 0000 01
Q ss_pred ceeeEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEe-c-CchhHHHHHHHHHHHHHH
Q psy11160 233 VQFQILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILT-T-NTWSSELSKLAANAFLAQ 310 (598)
Q Consensus 233 ~~~~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~-~-~~~~Ae~~Kl~~N~~~~~ 310 (598)
.| -++|....+ +. =|+.|... .+++++.+..+++.++. .++.+ . .++- +.| .+
T Consensus 144 --~H-ffNP~~~m~------LV---Eiv~g~~T---s~~~~~~~~~~~~~~gk-~pv~v~kd~pGF------i~N---Rl 198 (319)
T 3ado_A 144 --AH-PVNPPYYIP------LV---ELVPHPET---SPATVDRTHALMRKIGQ-SPVRVLKEIDGF------VLN---RL 198 (319)
T ss_dssp --EE-ECSSTTTCC------EE---EEEECTTC---CHHHHHHHHHHHHHTTC-EEEECSSCCTTT------THH---HH
T ss_pred --ec-CCCCccccc------hH---HhcCCCCC---cHHHHHHHHHHHHHhCC-ccCCcCCCCCCE------eHH---HH
Confidence 11 135544332 11 25555443 34788999999999874 45544 2 2332 223 34
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHcCCc
Q psy11160 311 RISSINSLSAVCEATGADVSEVAKAVGLDS 340 (598)
Q Consensus 311 ~ia~~nE~~~la~~~gid~~ev~~~l~~~~ 340 (598)
..++.+|+..+.+...++++++=+++....
T Consensus 199 ~~~~~~EA~~lv~eGvas~edID~~~~~g~ 228 (319)
T 3ado_A 199 QYAIISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 457889999999999999999988886543
No 88
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.12 E-value=1.3e-10 Score=114.51 Aligned_cols=93 Identities=13% Similarity=0.208 Sum_probs=69.1
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEE-EeCCHHHHHHHHcCCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTV-VDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~-~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++|||+|||+|.||..+|..|++ .|++|++ +|+++++++.+.+..
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~---------------------------~g~~V~~v~~r~~~~~~~l~~~~------- 67 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTA---------------------------AQIPAIIANSRGPASLSSVTDRF------- 67 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHH---------------------------TTCCEEEECTTCGGGGHHHHHHH-------
T ss_pred cCCEEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEECCCHHHHHHHHHHh-------
Confidence 46799999999999999999999 8999999 999999988876420
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
+...+.+..++++++|+||+|||.. .+.++++.+.+ + ++++|+..|..
T Consensus 68 -----------g~~~~~~~~~~~~~aDvVilavp~~---------------~~~~v~~~l~~-~-~~~ivi~~~~g 115 (220)
T 4huj_A 68 -----------GASVKAVELKDALQADVVILAVPYD---------------SIADIVTQVSD-W-GGQIVVDASNA 115 (220)
T ss_dssp -----------TTTEEECCHHHHTTSSEEEEESCGG---------------GHHHHHTTCSC-C-TTCEEEECCCC
T ss_pred -----------CCCcccChHHHHhcCCEEEEeCChH---------------HHHHHHHHhhc-c-CCCEEEEcCCC
Confidence 0112233345689999999998632 35666776665 4 57777765543
No 89
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.09 E-value=2.1e-09 Score=111.72 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=69.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCC---CC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIY---EP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~---e~ 81 (598)
.|||+|||+|.||+.+|..|++ .|++|++|++++ .+.+++....+. .+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~---------------------------~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g 52 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAK---------------------------TGHCVSVVSRSD--YETVKAKGIRIRSATLG 52 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHH---------------------------TTCEEEEECSTT--HHHHHHHCEEEEETTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHh---------------------------CCCeEEEEeCCh--HHHHHhCCcEEeecCCC
Confidence 3799999999999999999999 899999999987 266664211111 11
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
+.. . ..+.++++++++.+.+|+||+|||... ++++++.+.+.++++++||.
T Consensus 53 ~~~------~-~~~~~~~~~~~~~~~~DlVilavK~~~---------------~~~~l~~l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 53 DYT------F-RPAAVVRSAAELETKPDCTLLCIKVVE---------------GADRVGLLRDAVAPDTGIVL 103 (320)
T ss_dssp CEE------E-CCSCEESCGGGCSSCCSEEEECCCCCT---------------TCCHHHHHTTSCCTTCEEEE
T ss_pred cEE------E-eeeeeECCHHHcCCCCCEEEEecCCCC---------------hHHHHHHHHhhcCCCCEEEE
Confidence 100 0 023456777765568999999997653 34567788888888887664
No 90
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.05 E-value=1.3e-09 Score=114.01 Aligned_cols=131 Identities=17% Similarity=0.234 Sum_probs=92.4
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~ 79 (598)
|.++.|||+|||+|+||.++|..|+. .|+ +|++||+++++++.....
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~---------------------------~g~~~V~L~D~~~~~~~~~~~~----- 52 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCAL---------------------------RELADVVLYDVVKGMPEGKALD----- 52 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHH---------------------------HTCCEEEEECSSSSHHHHHHHH-----
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCeEEEEECChhHHHHHHHH-----
Confidence 44556899999999999999999999 687 999999999888763211
Q ss_pred CCChHHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcc-----hHHHHHHHHHHHHHcCCCcEE
Q psy11160 80 EPGLDEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAAD-----LKYVEAAARMIAEIATDNKIV 152 (598)
Q Consensus 80 e~~~~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~-----~~~~~~~~~~i~~~~~~~~iv 152 (598)
+.+.... ....++++|+|+++++++||+||+++++|.+.+....+ ...| ...++++++.|.++. ++.++
T Consensus 53 ---l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~v 128 (331)
T 1pzg_A 53 ---LSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFI 128 (331)
T ss_dssp ---HHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred ---HHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEE
Confidence 1111111 12356888999988999999999999888754320000 1223 455788888888887 55555
Q ss_pred EEecCCchHHHHHHHH
Q psy11160 153 VEKSTVPVRAAESIMN 168 (598)
Q Consensus 153 v~~STv~~~~~~~~~~ 168 (598)
++ .|.|.++.-.++.
T Consensus 129 i~-~tNP~~~~t~~~~ 143 (331)
T 1pzg_A 129 IV-VTNPLDCMVKVMC 143 (331)
T ss_dssp EE-CCSSHHHHHHHHH
T ss_pred EE-EcCchHHHHHHHH
Confidence 54 6889988755553
No 91
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.02 E-value=3.4e-10 Score=115.16 Aligned_cols=91 Identities=11% Similarity=0.132 Sum_probs=60.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+|||+|||+|.||.++|..|+. . ++| .+||+++++.+.+.+..
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~---------------------------~-~~v~~v~~~~~~~~~~~~~~~-------- 45 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKD---------------------------R-YEIGYILSRSIDRARNLAEVY-------- 45 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC--------------------------------CCCEECSSHHHHHHHHHHT--------
T ss_pred CceEEEEeCCHHHHHHHHHHHH---------------------------c-CcEEEEEeCCHHHHHHHHHHc--------
Confidence 3689999999999999999988 7 899 59999999998876310
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
+. .+++++++++++|+||+|||... +.++++.+. .++++|+..|+..+
T Consensus 46 ----------g~-~~~~~~~~~~~~DvVilav~~~~---------------~~~v~~~l~---~~~~ivi~~s~~~~ 93 (276)
T 2i76_A 46 ----------GG-KAATLEKHPELNGVVFVIVPDRY---------------IKTVANHLN---LGDAVLVHCSGFLS 93 (276)
T ss_dssp ----------CC-CCCSSCCCCC---CEEECSCTTT---------------HHHHHTTTC---CSSCCEEECCSSSC
T ss_pred ----------CC-ccCCHHHHHhcCCEEEEeCChHH---------------HHHHHHHhc---cCCCEEEECCCCCc
Confidence 11 34556666788999999987642 344554443 57888887776544
No 92
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.01 E-value=1.9e-09 Score=105.69 Aligned_cols=93 Identities=14% Similarity=0.214 Sum_probs=69.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|+|+|||+|.||..+|..|++ .|++|+++|+++++.+.+.+.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~---------------------------~g~~V~~~~r~~~~~~~~~~~---------- 70 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVG---------------------------SGFKVVVGSRNPKRTARLFPS---------- 70 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEESSHHHHHHHSBT----------
T ss_pred CCEEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHc----------
Confidence 4789999999999999999999 889999999999998877542
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
++..+ ++.++++++|+||+|+|... +.++++ +.+.+ ++++|+..|+..+-
T Consensus 71 ---------g~~~~-~~~~~~~~~DvVi~av~~~~---------------~~~v~~-l~~~~-~~~~vv~~s~g~~~ 120 (215)
T 2vns_A 71 ---------AAQVT-FQEEAVSSPEVIFVAVFREH---------------YSSLCS-LSDQL-AGKILVDVSNPTEQ 120 (215)
T ss_dssp ---------TSEEE-EHHHHTTSCSEEEECSCGGG---------------SGGGGG-GHHHH-TTCEEEECCCCCHH
T ss_pred ---------CCcee-cHHHHHhCCCEEEECCChHH---------------HHHHHH-HHHhc-CCCEEEEeCCCccc
Confidence 12333 67778899999999987421 111222 44455 78888888877653
No 93
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.99 E-value=2.6e-09 Score=110.74 Aligned_cols=124 Identities=20% Similarity=0.178 Sum_probs=87.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|+||.++|..|+. ++.|++|++||+++++++.+..... .....
T Consensus 1 mkI~VIGaG~vG~~la~~la~-------------------------~~~g~~V~l~D~~~~~~~~~~~~l~----~~~~~ 51 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAE-------------------------KQLARELVLLDVVEGIPQGKALDMY----ESGPV 51 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-------------------------TTCCSEEEEECSSSSHHHHHHHHHH----TTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-------------------------CCCCCEEEEEeCChhHHHHHHHhHH----hhhhc
Confidence 599999999999999999998 2137999999999988886542100 00000
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcch-----HHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADL-----KYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
.....++++++|+++ +++||+||+++|+|..+++ ...|+ +.++++.+.|.++.++..+++. |.|+
T Consensus 52 ---~~~~~~i~~t~d~~~-l~~aDvViiav~~p~~~g~----~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~--tNP~ 121 (310)
T 1guz_A 52 ---GLFDTKVTGSNDYAD-TANSDIVIITAGLPRKPGM----TREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV--SNPL 121 (310)
T ss_dssp ---HTCCCEEEEESCGGG-GTTCSEEEECCSCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC--CSSH
T ss_pred ---ccCCcEEEECCCHHH-HCCCCEEEEeCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE--cCch
Confidence 001245788889875 9999999999999876532 13444 6778888888888644444443 8899
Q ss_pred HHHHHHHH
Q psy11160 161 RAAESIMN 168 (598)
Q Consensus 161 ~~~~~~~~ 168 (598)
++...++.
T Consensus 122 ~~~~~~~~ 129 (310)
T 1guz_A 122 DIMTHVAW 129 (310)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98755543
No 94
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.99 E-value=7.9e-08 Score=99.36 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=69.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCC-C-h
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEP-G-L 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~-~-~ 83 (598)
|||+|||+|.||+.+|..|++ .|++|++|++++ .+.+++....+..+ + .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---------------------------~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~ 53 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR---------------------------SGEDVHFLLRRD--YEAIAGNGLKVFSINGDF 53 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH---------------------------TSCCEEEECSTT--HHHHHHTCEEEEETTCCE
T ss_pred CEEEEECcCHHHHHHHHHHHH---------------------------CCCeEEEEEcCc--HHHHHhCCCEEEcCCCeE
Confidence 799999999999999999999 899999999986 36666432211100 0 0
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
. . ..+.++++++ .+..+|+||+|||.. .++++++.|.+.+.++++||.
T Consensus 54 ~------~-~~~~~~~~~~-~~~~~D~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 54 T------L-PHVKGYRAPE-EIGPMDLVLVGLKTF---------------ANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp E------E-SCCCEESCHH-HHCCCSEEEECCCGG---------------GGGGHHHHHGGGCCTTCEEEE
T ss_pred E------E-eeceeecCHH-HcCCCCEEEEecCCC---------------CcHHHHHHHHhhcCCCCEEEE
Confidence 0 0 1234567775 478999999998654 245678889999998887764
No 95
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.95 E-value=4.2e-09 Score=109.82 Aligned_cols=128 Identities=14% Similarity=0.180 Sum_probs=89.4
Q ss_pred CCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+.++||+|||+|+||.++|..|+. .|+ +|+++|+++++++.....
T Consensus 2 ~~~~kI~VIGaG~vG~~ia~~la~---------------------------~g~~~v~L~Di~~~~l~~~~~~------- 47 (322)
T 1t2d_A 2 APKAKIVLVGSGMIGGVMATLIVQ---------------------------KNLGDVVLFDIVKNMPHGKALD------- 47 (322)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECSSSSHHHHHHHH-------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCeEEEEeCCHHHHHHHHHH-------
Confidence 456799999999999999999999 677 899999999888753321
Q ss_pred ChHHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCC-CCCCcc-----hHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 82 GLDEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNG-KGRAAD-----LKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 82 ~~~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~-~~~~~~-----~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
+.+.... ....++++++|+ +++++||+||+++++|.+.+.++ +....| ...++++++.|.++. ++.++++
T Consensus 48 -l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 124 (322)
T 1t2d_A 48 -TSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIV 124 (322)
T ss_dssp -HHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred -HHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE
Confidence 1111111 123468888998 68999999999998887653210 000223 356778888888887 6666555
Q ss_pred ecCCchHHHHHHHH
Q psy11160 155 KSTVPVRAAESIMN 168 (598)
Q Consensus 155 ~STv~~~~~~~~~~ 168 (598)
-|.|.+..-.++.
T Consensus 125 -~tNP~~~~t~~~~ 137 (322)
T 1t2d_A 125 -VTNPVDVMVQLLH 137 (322)
T ss_dssp -CSSSHHHHHHHHH
T ss_pred -ecCChHHHHHHHH
Confidence 3778887655443
No 96
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.93 E-value=9.2e-09 Score=107.86 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=72.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH-HHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER-IRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~-~~~~~~~~~~~~e~~~ 83 (598)
.++|+|||+|.||.++|..|+. .|++|+++|+++++ .+...+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~---------------------------~G~~V~~~~~~~~~~~~~a~~~--------- 59 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD---------------------------SGVDVTVGLRSGSATVAKAEAH--------- 59 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECCTTCHHHHHHHHT---------
T ss_pred CCEEEEECchHHHHHHHHHHHH---------------------------CcCEEEEEECChHHHHHHHHHC---------
Confidence 4689999999999999999999 78999999998765 4433321
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHH-HHHHHcCCCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAAR-MIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~ivv~~STv 158 (598)
++..+ ++.+++++||+||+|||.. ...++++ ++.+.++++++|++.+++
T Consensus 60 ----------G~~~~-~~~e~~~~aDvVilavp~~---------------~~~~v~~~~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 60 ----------GLKVA-DVKTAVAAADVVMILTPDE---------------FQGRLYKEEIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp ----------TCEEE-CHHHHHHTCSEEEECSCHH---------------HHHHHHHHHTGGGCCTTCEEEESCCH
T ss_pred ----------CCEEc-cHHHHHhcCCEEEEeCCcH---------------HHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 23444 7778899999999998653 3466776 888889999999876543
No 97
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.90 E-value=1.5e-09 Score=115.55 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=86.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--------ceEEEEeCCHH-----HHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--------IQVTVVDKSEE-----RIRQW 71 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~~v~~~d~~~~-----~~~~~ 71 (598)
..||+|||+|.||+++|..|++ +| ++|++|.++++ .++.+
T Consensus 34 p~KI~ViGaGsWGTALA~~la~---------------------------ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~i 86 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAE---------------------------NCKGYPEVFAPIVQMWVFEEEINGEKLTEII 86 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---------------------------HHHHCTTTEEEEEEEECCCCBSSSCBHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHH---------------------------cCCCccccCCceEEEEEcchHhhhHHHHHHH
Confidence 3599999999999999999998 44 46999998865 36677
Q ss_pred Hc-CCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q psy11160 72 NS-NKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNK 150 (598)
Q Consensus 72 ~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 150 (598)
|+ +.++.|.|++. .+.++++++|+.+++++||+||++||+. .++++++++.++++++.
T Consensus 87 n~~~~N~~YLpgv~------Lp~~i~~t~dl~~al~~ad~ii~avPs~---------------~~r~~l~~l~~~~~~~~ 145 (391)
T 4fgw_A 87 NTRHQNVKYLPGIT------LPDNLVANPDLIDSVKDVDIIVFNIPHQ---------------FLPRICSQLKGHVDSHV 145 (391)
T ss_dssp TTTCCBTTTBTTCC------CCSSEEEESCHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTSCTTC
T ss_pred HhcCcCcccCCCCc------CCCCcEEeCCHHHHHhcCCEEEEECChh---------------hhHHHHHHhccccCCCc
Confidence 75 45677777652 3568999999999999999999999875 48899999999999998
Q ss_pred EEEEecC
Q psy11160 151 IVVEKST 157 (598)
Q Consensus 151 ivv~~ST 157 (598)
++|..+-
T Consensus 146 ~iv~~~K 152 (391)
T 4fgw_A 146 RAISCLK 152 (391)
T ss_dssp EEEECCC
T ss_pred eeEEecc
Confidence 8886553
No 98
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.90 E-value=4.8e-09 Score=109.18 Aligned_cols=125 Identities=17% Similarity=0.281 Sum_probs=78.5
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHH----HHcC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQ----WNSN 74 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~----~~~~ 74 (598)
|.++.+||+|||+|+||.++|..|+. .|+ +|+++|+++++++. +..+
T Consensus 3 m~~~~~KI~IiGaG~vG~~~a~~l~~---------------------------~~~~~ev~L~Di~~~~~~g~~~dl~~~ 55 (318)
T 1y6j_A 3 MVKSRSKVAIIGAGFVGASAAFTMAL---------------------------RQTANELVLIDVFKEKAIGEAMDINHG 55 (318)
T ss_dssp ----CCCEEEECCSHHHHHHHHHHHH---------------------------TTCSSEEEEECCC---CCHHHHHHTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCCEEEEEeCChHHHHHHHHHHHHh
Confidence 43446899999999999999999999 555 99999999877543 2222
Q ss_pred CCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEE
Q psy11160 75 KLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVV 153 (598)
Q Consensus 75 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv 153 (598)
. ++. ...+++.+..+++++||+||+++++|.++..++.+ ...+.+.++++.+.|.++. ++.+|+
T Consensus 56 ~-~~~-------------~~~~i~~~~~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi 120 (318)
T 1y6j_A 56 L-PFM-------------GQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVIL 120 (318)
T ss_dssp C-CCT-------------TCEEEC--CGGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEE
T ss_pred H-Hhc-------------CCeEEEECCHHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEE
Confidence 1 111 12233323345899999999999998764321100 1334556788888888884 666666
Q ss_pred EecCCchHHHHHHHH
Q psy11160 154 EKSTVPVRAAESIMN 168 (598)
Q Consensus 154 ~~STv~~~~~~~~~~ 168 (598)
+ .|.|+++.-.++.
T Consensus 121 v-~tNPv~~~~~~~~ 134 (318)
T 1y6j_A 121 V-VSNPVDIITYMIQ 134 (318)
T ss_dssp E-CSSSHHHHHHHHH
T ss_pred E-ecCcHHHHHHHHH
Confidence 6 6999999876654
No 99
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.88 E-value=1.5e-08 Score=105.86 Aligned_cols=124 Identities=19% Similarity=0.259 Sum_probs=86.7
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+||+|||+|+||.++|..|+. .|+ +|++||+++++++..... +.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~---------------------------~g~~~V~L~Di~~~~l~~~~~~--------l~ 59 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ---------------------------KDLGDVYMFDIIEGVPQGKALD--------LN 59 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECSSTTHHHHHHHH--------HH
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCeEEEEECCHHHHHHHHHH--------HH
Confidence 699999999999999999999 788 999999999888753211 11
Q ss_pred HHHhhh-cCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKT-RDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~-~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+..... ...++++++|+ +++++||+||+++++|.+++.++.+ ...+.+.++++++.|.++. ++.++++- |-|.+.
T Consensus 60 ~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~~~ 136 (328)
T 2hjr_A 60 HCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI-TNPLDA 136 (328)
T ss_dssp HHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHH
T ss_pred hHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe-cCchHH
Confidence 111111 13568888998 6899999999999988765432111 0113356778888888887 56665553 557666
Q ss_pred HHHHH
Q psy11160 163 AESIM 167 (598)
Q Consensus 163 ~~~~~ 167 (598)
.-.++
T Consensus 137 ~t~~~ 141 (328)
T 2hjr_A 137 MVYYF 141 (328)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 100
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.85 E-value=1.2e-08 Score=105.57 Aligned_cols=125 Identities=18% Similarity=0.248 Sum_probs=82.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||+|||+|+||.++|..|+. .|+ +|+++|+++++++..... +.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~---------------------------~g~~~v~L~Di~~~~~~g~~~d--------l~ 47 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA---------------------------KELGDIVLLDIVEGVPQGKALD--------LY 47 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCSEEEEECSSSSHHHHHHHH--------HH
T ss_pred CEEEEECCCHHHHHHHHHHHH---------------------------CCCCeEEEEeCCccHHHHHHHh--------HH
Confidence 699999999999999999999 676 899999999887643211 11
Q ss_pred HHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+.... ....++++++|+ +++++||+||+++++|.++..++.+ ...+...++++.+.|.++. ++.+++. .|.|.++
T Consensus 48 ~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNPv~~ 124 (309)
T 1ur5_A 48 EASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIM-VNNPLDA 124 (309)
T ss_dssp TTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE-CCSSHHH
T ss_pred HhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-cCCchHH
Confidence 11100 113467888898 6899999999999998765431110 0112345566667776665 6666665 6889998
Q ss_pred HHHHHH
Q psy11160 163 AESIMN 168 (598)
Q Consensus 163 ~~~~~~ 168 (598)
.-.++.
T Consensus 125 ~t~~~~ 130 (309)
T 1ur5_A 125 MTYLAA 130 (309)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765554
No 101
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.82 E-value=2.7e-08 Score=103.23 Aligned_cols=123 Identities=15% Similarity=0.263 Sum_probs=84.5
Q ss_pred CCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 2 VQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 2 ~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
|.+.+||+|||+|.||.++|..|+. .|+ +|++||+++++++.....
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~---------------------------~g~~~V~l~D~~~~~~~~~~~~------ 47 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGK---------------------------DNLADVVLFDIAEGIPQGKALD------ 47 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHH---------------------------HTCCEEEEECSSSSHHHHHHHH------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh---------------------------CCCceEEEEeCCchHHHHHHHH------
Confidence 3445799999999999999999999 787 999999999887753210
Q ss_pred CChHHHHh-hhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCC-CcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 81 PGLDEVVK-KTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGR-AADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
+..... .....+++.++|+ +++++||+||++++.|.++..++.+. ..+...++++++.|.++.+ +.+++.-|.
T Consensus 48 --l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sN- 122 (317)
T 2ewd_A 48 --ITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITN- 122 (317)
T ss_dssp --HHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCS-
T ss_pred --HHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCC-
Confidence 000000 0112467888888 68999999999999987654321111 1234567788888888864 676655443
Q ss_pred chHH
Q psy11160 159 PVRA 162 (598)
Q Consensus 159 ~~~~ 162 (598)
|.+.
T Consensus 123 p~~~ 126 (317)
T 2ewd_A 123 PLDV 126 (317)
T ss_dssp SHHH
T ss_pred hHHH
Confidence 4444
No 102
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.81 E-value=7e-09 Score=108.22 Aligned_cols=125 Identities=18% Similarity=0.216 Sum_probs=83.5
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHH----HHcC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQ----WNSN 74 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~----~~~~ 74 (598)
|++..+||+|||+|+||.++|..|+. .|+ +|+++|+++++++. ++.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~---------------------------~~~~~~l~l~D~~~~k~~g~a~DL~~~ 53 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALIN---------------------------QGITDELVVIDVNKEKAMGDVMDLNHG 53 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCceEEEEecchHHHHHHHHHHHhc
Confidence 66778999999999999999999998 455 99999999998876 6654
Q ss_pred CCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEE
Q psy11160 75 KLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVV 153 (598)
Q Consensus 75 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv 153 (598)
.|+.... ..+ .+.++ +++++||+||+++++|.++..++.+ ...+.+.+++..+.|.++.+ +.+++
T Consensus 54 -~~~~~~~----------v~i-~~~~~-~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vl 119 (326)
T 3pqe_A 54 -KAFAPQP----------VKT-SYGTY-EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFL 119 (326)
T ss_dssp -GGGSSSC----------CEE-EEECG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEE
T ss_pred -cccccCC----------eEE-EeCcH-HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEE
Confidence 4432111 122 24455 5899999999999998765432111 11234556677777777654 44444
Q ss_pred EecCCchHHHHHHH
Q psy11160 154 EKSTVPVRAAESIM 167 (598)
Q Consensus 154 ~~STv~~~~~~~~~ 167 (598)
+ -|-|..+.-.++
T Consensus 120 v-vtNPvd~~t~~~ 132 (326)
T 3pqe_A 120 V-ATNPVDILTYAT 132 (326)
T ss_dssp E-CSSSHHHHHHHH
T ss_pred E-cCChHHHHHHHH
Confidence 3 335666554433
No 103
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.30 E-value=4.9e-10 Score=109.03 Aligned_cols=91 Identities=12% Similarity=0.177 Sum_probs=64.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.|+|+|||+|.||..+|..|++ .|++|++||++++ .+.+..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~---------------------------~G~~V~~~~r~~~-~~~~~~----------- 59 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQ---------------------------CGYSVVFGSRNPQ-VSSLLP----------- 59 (201)
Confidence 4689999999999999999998 7899999999876 333221
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
.+...+ ++.++++++|+||+|||.+. +++++ .+.+ ..++++||..++..+
T Consensus 60 --------~g~~~~-~~~~~~~~aDvVilav~~~~---------------~~~v~-~l~~-~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 60 --------RGAEVL-CYSEAASRSDVIVLAVHREH---------------YDFLA-ELAD-SLKGRVLIDVSNNQK 109 (201)
Confidence 012333 56667889999999997531 22233 3333 346788888777665
No 104
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.78 E-value=1.1e-07 Score=109.16 Aligned_cols=206 Identities=13% Similarity=0.162 Sum_probs=133.6
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+.||+|||+|.||..+|.+++. .|++|+++|++++.++...+... ..+
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~---------------------------aG~~V~l~D~~~~~l~~~~~~i~----~~l 363 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFAR---------------------------VGISVVAVESDPKQLDAAKKIIT----FTL 363 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECSSHHHHHHHHHHHH----HHH
T ss_pred cccEEEEEcccHHHHHHHHHHHh---------------------------CCCchhcccchHhhhhhHHHHHH----HHH
Confidence 36799999999999999999999 89999999999998776442110 001
Q ss_pred HHHHhh-------hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEE-EEe
Q psy11160 84 DEVVKK-------TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIV-VEK 155 (598)
Q Consensus 84 ~~~~~~-------~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iv-v~~ 155 (598)
+....+ ....+++.+++++ ++++||+||-+|+.. ++.=+++++++.+.+++++|+ .++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aDlVIEAV~E~-------------l~iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 364 EKEASRAHQNGQASAKPKLRFSSSTK-ELSTVDLVVEAVFED-------------MNLKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp HHHHHHHHTTTCCCCCCCEEEESCGG-GGGSCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHhccccchhhhhhhhcccCcHH-HHhhCCEEEEecccc-------------HHHHHHHHHHHhhcCCCCceEEecC
Confidence 111111 0124678888886 699999999999653 334467889999999999988 556
Q ss_pred cCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccchhhhhHHHHHhhcccCCcee
Q psy11160 156 STVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQF 235 (598)
Q Consensus 156 STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~gtt~~~~~~L~~~~~~g~~~ 235 (598)
||+++... +. .++. | + . . .|.
T Consensus 430 Ssl~i~~i---a~-------------------------------~~~~----------p----~-------r-~-ig~-- 450 (742)
T 3zwc_A 430 SALNVDDI---AS-------------------------------STDR----------P----Q-------L-V-IGT-- 450 (742)
T ss_dssp SSSCHHHH---HT-------------------------------TSSC----------G----G-------G-E-EEE--
T ss_pred CcCChHHH---Hh-------------------------------hcCC----------c----c-------c-c-ccc--
Confidence 77776543 11 0000 0 0 0 0 111
Q ss_pred eEEECCcccCcCchhhhcCCCCEEEEccCCCchhHHHHHHHHHHHhcccCCceEEecC-chhHHHHHHHHHHHHHHHHHH
Q psy11160 236 QILSNPEFLSEGTAMTDLFNADRILIGGEETPEGYAAIESLSWVYEHWIPRKHILTTN-TWSSELSKLAANAFLAQRISS 314 (598)
Q Consensus 236 ~l~~~Pe~~~~G~a~~~~~~p~rv~vGg~~~~~~~~a~~~l~~ly~~~~~~~~v~~~~-~~~Ae~~Kl~~N~~~~~~ia~ 314 (598)
| -++|....+ +. -|+.|... .+++++.+..+.+.+++ .++.+.+ ++ ++.| .+...+
T Consensus 451 H-FfnP~~~m~------LV---Evi~g~~T---s~e~~~~~~~~~~~lgK-~pV~vkd~pG------Fi~N---Ri~~~~ 507 (742)
T 3zwc_A 451 H-FFSPAHVMR------LL---EVIPSRYS---SPTTIATVMSLSKKIGK-IGVVVGNCYG------FVGN---RMLAPY 507 (742)
T ss_dssp E-CCSSTTTCC------EE---EEEECSSC---CHHHHHHHHHHHHHTTC-EEEECCCSTT------TTHH---HHHHHH
T ss_pred c-ccCCCCCCc------eE---EEecCCCC---CHHHHHHHHHHHHHhCC-CCcccCCCCC------ccHH---HHhhHH
Confidence 1 125543322 11 26666544 34788889999998874 5555543 22 2333 234467
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHc
Q psy11160 315 INSLSAVCEATGADVSEVAKAVG 337 (598)
Q Consensus 315 ~nE~~~la~~~gid~~ev~~~l~ 337 (598)
++|...+.+. |+++.++.+++.
T Consensus 508 ~~ea~~l~~e-G~~~~~id~a~~ 529 (742)
T 3zwc_A 508 YNQGFFLLEE-GSKPEDVDGVLE 529 (742)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHH
Confidence 7888887765 799999998884
No 105
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.78 E-value=6.1e-08 Score=99.38 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=65.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+|||+|||+|.||+.+|..|++ .|++|++|+++++.++... +.|.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~---------------------------~g~~V~~~~r~~~~~~~~~-------~~g~- 46 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQ---------------------------SLPHTTLIGRHAKTITYYT-------VPHA- 46 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH---------------------------HCTTCEEEESSCEEEEEES-------STTS-
T ss_pred CcEEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEEeccCcEEEEe-------cCCe-
Confidence 3799999999999999999999 7899999999865432110 0010
Q ss_pred HHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
.....+.+..+++ ..+|+||+||+.. .++++++.+.+.+.++++||.
T Consensus 47 --------~~~~~~~~~~~~~~~~~D~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~ 94 (294)
T 3g17_A 47 --------PAQDIVVKGYEDVTNTFDVIIIAVKTH---------------QLDAVIPHLTYLAHEDTLIIL 94 (294)
T ss_dssp --------CCEEEEEEEGGGCCSCEEEEEECSCGG---------------GHHHHGGGHHHHEEEEEEEEE
T ss_pred --------eccceecCchHhcCCCCCEEEEeCCcc---------------CHHHHHHHHHHhhCCCCEEEE
Confidence 0112333444454 7899999998653 367788889999988877664
No 106
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.77 E-value=9.1e-09 Score=110.12 Aligned_cols=106 Identities=18% Similarity=0.252 Sum_probs=77.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-CceEEEEe---CCHHHHHH-HHcCCC--C
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NIQVTVVD---KSEERIRQ-WNSNKL--P 77 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~d---~~~~~~~~-~~~~~~--~ 77 (598)
+|||+|||+|.||..+|..|+. . |++|++|| +++++++. ++++.. .
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~---------------------------~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~ 54 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAAS---------------------------RDGVEVRVLTLFADEAERWTKALGADELTVI 54 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT---------------------------STTEEEEEECCSTTHHHHHHHHHTTSCEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHh---------------------------CCCCEEEEEeCCCCcHHHHHHHHhhccceee
Confidence 3799999999999999999987 4 99999999 98999888 444321 1
Q ss_pred CCCCChHHHHhhhcCCce-EEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe
Q psy11160 78 IYEPGLDEVVKKTRDVNL-FFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK 155 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ 155 (598)
..+++.++. ....++ .+++++++++++||+||+|||++ .++++++.|.+.++++++|+..
T Consensus 55 ~~~~~~~~~---~~~~~~~~~~~~~~~a~~~aD~Vilav~~~---------------~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 55 VNEKDGTQT---EVKSRPKVITKDPEIAISGADVVILTVPAF---------------AHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp EECSSSCEE---EEEECCSEEESCHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTCCTTCEEEET
T ss_pred eecCCCccc---eeeccceEEeCCHHHHhCCCCEEEEeCchH---------------HHHHHHHHHHhhCCCCcEEEEc
Confidence 111111000 000123 37788988899999999999765 2577888999999989887763
No 107
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.77 E-value=4.1e-08 Score=101.48 Aligned_cols=124 Identities=14% Similarity=0.190 Sum_probs=83.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|||+|||+|.||.++|..|+. .| ++|+++|+++++++.+....
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~---------------------------~g~~~~V~l~d~~~~~~~~~~~~l-------- 46 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA---------------------------QGVADDYVFIDANEAKVKADQIDF-------- 46 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECSSHHHHHHHHHHH--------
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCCEEEEEcCCHHHHHHHHHHH--------
Confidence 699999999999999999999 66 79999999999888765310
Q ss_pred HHHHhhhcCCceEE-ecCHHHHhccCcEEEEecCCCCC----CCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 84 DEVVKKTRDVNLFF-STDIKSAIQKAQLIFISVNTPTK----TFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~~~adviii~v~tp~~----~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
.+... ......+. ++++ +++++||+||++++.|.. +...+.+ ...++..++++++.|.++. ++.+++. .|
T Consensus 47 ~~~~~-~~~~~~~~~~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~-~t 122 (309)
T 1hyh_A 47 QDAMA-NLEAHGNIVINDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVV-IS 122 (309)
T ss_dssp HHHGG-GSSSCCEEEESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEE-CS
T ss_pred Hhhhh-hcCCCeEEEeCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-Ec
Confidence 00000 00112333 5677 689999999999988753 2211100 1123455778888888776 4666655 78
Q ss_pred CchHHHHHHHH
Q psy11160 158 VPVRAAESIMN 168 (598)
Q Consensus 158 v~~~~~~~~~~ 168 (598)
.|.+....++.
T Consensus 123 Np~~~~~~~~~ 133 (309)
T 1hyh_A 123 NPVDVITALFQ 133 (309)
T ss_dssp SSHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 88887655543
No 108
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.75 E-value=3.5e-08 Score=103.15 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=78.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..++. .|++|++||+++++.+.+...
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~~---------- 197 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKP---------------------------FGVQRFLYTGRQPRPEEAAEF---------- 197 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG---------------------------GTCCEEEEESSSCCHHHHHTT----------
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEECCCCcchhHHHhc----------
Confidence 3689999999999999999988 789999999987655544321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+...+ ++.+++++||+|++++|.+....+ ..+ +.+.+.++++.++|+.|+.++...+
T Consensus 198 ---------g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~-----~i~--------~~~~~~mk~gailIn~srg~~v~~~ 254 (330)
T 2gcg_A 198 ---------QAEFV-STPELAAQSDFIVVACSLTPATEG-----LCN--------KDFFQKMKETAVFINISRGDVVNQD 254 (330)
T ss_dssp ---------TCEEC-CHHHHHHHCSEEEECCCCCTTTTT-----CBS--------HHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ---------CceeC-CHHHHHhhCCEEEEeCCCChHHHH-----hhC--------HHHHhcCCCCcEEEECCCCcccCHH
Confidence 23344 778889999999999987532111 111 3456678999999999999887776
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 255 aL~~ 258 (330)
T 2gcg_A 255 DLYQ 258 (330)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 109
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.74 E-value=1.3e-07 Score=93.67 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=62.4
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
|....|||+|||+|.||.+||..|++ +|++|++||+.
T Consensus 2 ~~~~~mkI~IIG~G~~G~sLA~~L~~---------------------------~G~~V~~~~~~---------------- 38 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTVNMAEKLDS---------------------------VGHYVTVLHAP---------------- 38 (232)
T ss_dssp -CCCCCEEEEECCSCCCSCHHHHHHH---------------------------TTCEEEECSSG----------------
T ss_pred CCCCCcEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEecCH----------------
Confidence 33456899999999999999999999 89999999982
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
+.+++|| |+|||.. .+.++++++.+.++++++|++.|..
T Consensus 39 ----------------------~~~~~aD--ilavP~~---------------ai~~vl~~l~~~l~~g~ivvd~sgs 77 (232)
T 3dfu_A 39 ----------------------EDIRDFE--LVVIDAH---------------GVEGYVEKLSAFARRGQMFLHTSLT 77 (232)
T ss_dssp ----------------------GGGGGCS--EEEECSS---------------CHHHHHHHHHTTCCTTCEEEECCSS
T ss_pred ----------------------HHhccCC--EEEEcHH---------------HHHHHHHHHHHhcCCCCEEEEECCc
Confidence 1256789 9998764 3678888999999999999987644
No 110
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.74 E-value=3.9e-08 Score=102.12 Aligned_cols=129 Identities=22% Similarity=0.278 Sum_probs=84.4
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCC--HHHHHHHHcCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKS--EERIRQWNSNKLP 77 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~--~~~~~~~~~~~~~ 77 (598)
|+.+.+||+|||+|.||.++|..|+. .|+ +|+++|++ +++.+....
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~---------------------------~g~~~v~l~D~~~~~~~~~g~a~---- 52 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQ---------------------------KELADVVLVDIPQLENPTKGKAL---- 52 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECCGGGHHHHHHHHH----
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCeEEEEeccchHHHHHHhhh----
Confidence 44456799999999999999999999 788 99999999 666654331
Q ss_pred CCCCChHHHHhhh-cCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEe
Q psy11160 78 IYEPGLDEVVKKT-RDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEK 155 (598)
Q Consensus 78 ~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~ 155 (598)
++.+..... ...+++.+++++ ++++||+||+++++|.++..++.+ -..+.+.+++..+.|.++. ++.++++-
T Consensus 53 ----dl~~~~~~~~~~~~i~~t~d~~-a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvv 126 (315)
T 3tl2_A 53 ----DMLEASPVQGFDANIIGTSDYA-DTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVL 126 (315)
T ss_dssp ----HHHHHHHHHTCCCCEEEESCGG-GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred ----hHHHhhhhccCCCEEEEcCCHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEC
Confidence 011111000 234677788875 899999999999998876432111 1123445667777777776 44444443
Q ss_pred cCCchHHHHHHH
Q psy11160 156 STVPVRAAESIM 167 (598)
Q Consensus 156 STv~~~~~~~~~ 167 (598)
| -|..+.-.++
T Consensus 127 s-NPvd~~t~~~ 137 (315)
T 3tl2_A 127 T-NPVDAMTYSV 137 (315)
T ss_dssp C-SSHHHHHHHH
T ss_pred C-ChHHHHHHHH
Confidence 3 4555554433
No 111
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.73 E-value=2.3e-08 Score=104.74 Aligned_cols=103 Identities=12% Similarity=0.193 Sum_probs=77.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..++. .|++|++||+++++ +.....
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~---------------------------~G~~V~~~d~~~~~-~~~~~~---------- 191 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKG---------------------------FNMRILYYSRTRKE-EVEREL---------- 191 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCH-HHHHHH----------
T ss_pred CCEEEEEccCHHHHHHHHHHHh---------------------------CCCEEEEECCCcch-hhHhhc----------
Confidence 3689999999999999999999 79999999998876 433210
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+... .++.+++++||+|++++|.+....+ +. .+.+.+.++++.++|+.|+.++...+
T Consensus 192 ---------g~~~-~~l~~~l~~aDvVil~vp~~~~t~~-----------~i--~~~~~~~mk~~ailIn~srg~~v~~~ 248 (334)
T 2dbq_A 192 ---------NAEF-KPLEDLLRESDFVVLAVPLTRETYH-----------LI--NEERLKLMKKTAILINIARGKVVDTN 248 (334)
T ss_dssp ---------CCEE-CCHHHHHHHCSEEEECCCCCTTTTT-----------CB--CHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ---------Cccc-CCHHHHHhhCCEEEECCCCChHHHH-----------hh--CHHHHhcCCCCcEEEECCCCcccCHH
Confidence 1233 4778889999999999987642211 11 03456778999999999999887776
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 249 aL~~ 252 (334)
T 2dbq_A 249 ALVK 252 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 112
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.69 E-value=6.8e-08 Score=99.76 Aligned_cols=118 Identities=15% Similarity=0.300 Sum_probs=76.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcC---CCCCCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSN---KLPIYE 80 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~---~~~~~e 80 (598)
|||+|||+|.||.++|..|+. .|+ +|+++|+++++++..... ..++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~---------------------------~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~- 52 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL---------------------------RGSCSELVLVDRDEDRAQAEAEDIAHAAPVS- 52 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCCSEEEEECSSHHHHHHHHHHHTTSCCTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCCEEEEEeCCHHHHHHHHHhhhhhhhhc-
Confidence 599999999999999999999 788 999999999877643211 11110
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
...+++. +++ +++++||+||++++.|.++..++.+ ...++..++++++.|.++. ++.++++ .|-|
T Consensus 53 ----------~~~~i~~-~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~-~tNP 118 (304)
T 2v6b_A 53 ----------HGTRVWH-GGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLV-TSNP 118 (304)
T ss_dssp ----------SCCEEEE-ECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEE-CSSS
T ss_pred ----------CCeEEEE-CCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEE-ecCc
Confidence 0123443 455 5899999999999888654322111 1235667788888998884 6766665 5777
Q ss_pred hHHHHH
Q psy11160 160 VRAAES 165 (598)
Q Consensus 160 ~~~~~~ 165 (598)
.+..-.
T Consensus 119 ~~~~~~ 124 (304)
T 2v6b_A 119 VDLLTD 124 (304)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 776533
No 113
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.69 E-value=8.9e-08 Score=98.46 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=82.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHH----HHcCCCCCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQ----WNSNKLPIY 79 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~----~~~~~~~~~ 79 (598)
|||+|||+|.||.++|..|+. .|+ +|++||+++++++. ++....++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~---------------------------~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~- 52 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLL---------------------------NLDVDEIALVDIAEDLAVGEAMDLAHAAAGI- 52 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HSCCSEEEEECSSHHHHHHHHHHHHHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCCeEEEEECChHHHHHHHHHHHhhhhhc-
Confidence 699999999999999999998 566 99999999998762 11110000
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
....++++++| .+++++||+||++.+.|.++..++.+ ...+.+.+++..+.|.++ .++.++++-| -
T Consensus 53 ----------~~~~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs-N 119 (294)
T 1oju_A 53 ----------DKYPKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT-N 119 (294)
T ss_dssp ----------TCCCEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS-S
T ss_pred ----------CCCCEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC-C
Confidence 01235777888 56999999999999998765432111 112345566677777776 4556665544 5
Q ss_pred chHHHHHHH
Q psy11160 159 PVRAAESIM 167 (598)
Q Consensus 159 ~~~~~~~~~ 167 (598)
|..+.-.++
T Consensus 120 Pvd~~t~~~ 128 (294)
T 1oju_A 120 PMDVMTYIM 128 (294)
T ss_dssp SHHHHHHHH
T ss_pred cchHHHHHH
Confidence 666654444
No 114
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.68 E-value=8.6e-08 Score=99.63 Aligned_cols=126 Identities=16% Similarity=0.144 Sum_probs=84.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
.+||+|||+|++|.++|..|+. .| .+|.++|+++++++.... .
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~---------------------------~~~~~ei~L~Di~~~~~~g~~~--------d 50 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVN---------------------------QSIVDELVIIDLDTEKVRGDVM--------D 50 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------HCSCSEEEEECSCHHHHHHHHH--------H
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCCCEEEEEeCChhHhhhhhh--------h
Confidence 4799999999999999999998 44 599999999987764211 0
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
+.+.. .......+.+.+..+++++||+||++++.|.++..++.+ ...+...++++.+.|.++ .++.++++ .|.|++
T Consensus 51 l~~~~-~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv-~tNPv~ 127 (317)
T 3d0o_A 51 LKHAT-PYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLV-ATNPVD 127 (317)
T ss_dssp HHHHG-GGSSSCCEEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEE-CSSSHH
T ss_pred HHhhh-hhcCCCeEEEeCCHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEE-ecCcHH
Confidence 11110 011112333334456899999999999998765321000 123456677777888887 46677666 679999
Q ss_pred HHHHHHH
Q psy11160 162 AAESIMN 168 (598)
Q Consensus 162 ~~~~~~~ 168 (598)
+.-.++.
T Consensus 128 ~~t~~~~ 134 (317)
T 3d0o_A 128 ILAYATW 134 (317)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765554
No 115
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.68 E-value=8.4e-08 Score=99.70 Aligned_cols=119 Identities=19% Similarity=0.309 Sum_probs=81.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|||+|||+|.||.++|..|+. .|+ +|+++|+++++++.+... +
T Consensus 1 mkI~VIGaG~~G~~la~~l~~---------------------------~g~~~~V~l~D~~~~~~~~~~~~--------l 45 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM---------------------------KGFAREMVLIDVDKKRAEGDALD--------L 45 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECSSHHHHHHHHHH--------H
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCCeEEEEeCChHHHHHHHHH--------H
Confidence 589999999999999999999 678 999999999988765421 0
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcc-----hHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAAD-----LKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.+........++.. +++ +++++||+||+++|+|..+..+ ..| .+.++++++.|.++. ++.+++. .|.
T Consensus 46 ~~~~~~~~~~~i~~-~d~-~~~~~aDvViiav~~~~~~g~~----r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~-~tN 117 (319)
T 1a5z_A 46 IHGTPFTRRANIYA-GDY-ADLKGSDVVIVAAGVPQKPGET----RLQLLGRNARVMKEIARNVSKYA-PDSIVIV-VTN 117 (319)
T ss_dssp HHHGGGSCCCEEEE-CCG-GGGTTCSEEEECCCCCCCSSCC----HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSS
T ss_pred HhhhhhcCCcEEEe-CCH-HHhCCCCEEEEccCCCCCCCCC----HHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-eCC
Confidence 00000000123444 465 5789999999999988654211 222 334677888888885 5555544 577
Q ss_pred chHHHHHHH
Q psy11160 159 PVRAAESIM 167 (598)
Q Consensus 159 ~~~~~~~~~ 167 (598)
|.+....++
T Consensus 118 p~~~~~~~~ 126 (319)
T 1a5z_A 118 PVDVLTYFF 126 (319)
T ss_dssp SHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 887765444
No 116
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.67 E-value=1.1e-07 Score=98.42 Aligned_cols=123 Identities=21% Similarity=0.272 Sum_probs=83.6
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHH--HH--HcCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIR--QW--NSNKLP 77 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~--~~--~~~~~~ 77 (598)
++|||+|||+|.||.++|..|+. .|+ +|+++|+++++++ .+ ..+. +
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~---------------------------~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~ 57 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQ---------------------------RGIAREIVLEDIAKERVEAEVLDMQHGS-S 57 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---------------------------TTCCSEEEEECSSHHHHHHHHHHHHHTG-G
T ss_pred CCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCCEEEEEeCChhHHHHHHHHHHhhh-h
Confidence 35799999999999999999999 788 9999999998876 22 2332 1
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
+.. ..+++.++++ +++++||+||++++.|..+...+.+ -..+...++++++.|.++ .++.+|+. .
T Consensus 58 ~~~-----------~~~v~~~~~~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~-~ 123 (319)
T 1lld_A 58 FYP-----------TVSIDGSDDP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML-I 123 (319)
T ss_dssp GST-----------TCEEEEESCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE-C
T ss_pred hcC-----------CeEEEeCCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE-e
Confidence 110 1345666676 4789999999999887643210000 011345566778888876 56666554 6
Q ss_pred CCchHHHHHHHH
Q psy11160 157 TVPVRAAESIMN 168 (598)
Q Consensus 157 Tv~~~~~~~~~~ 168 (598)
|-|.+....++.
T Consensus 124 ~Np~~~~~~~~~ 135 (319)
T 1lld_A 124 TNPVDIATHVAQ 135 (319)
T ss_dssp CSSHHHHHHHHH
T ss_pred cCchHHHHHHHH
Confidence 778887765554
No 117
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.65 E-value=7.5e-08 Score=100.32 Aligned_cols=124 Identities=21% Similarity=0.265 Sum_probs=81.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||.++|..|+. .|+ +|+++|+++++++.... .+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~---------------------------~~~~~v~L~Di~~~~~~g~~~--------dl 51 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL---------------------------KELGDVVLFDIAEGTPQGKGL--------DI 51 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECSSSSHHHHHHH--------HH
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCCeEEEEeCCchhHHHHHH--------HH
Confidence 4799999999999999999999 677 99999999988753221 01
Q ss_pred HHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 84 DEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 84 ~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.+.... ....++.+++|+ +++++||+||++.+.|.++..++.+ -..+...+++..+.|.++. ++.++++-| -|..
T Consensus 52 ~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvt-NPvd 128 (324)
T 3gvi_A 52 AESSPVDGFDAKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICIT-NPLD 128 (324)
T ss_dssp HHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC-SSHH
T ss_pred hchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecC-CCcH
Confidence 111000 013467788888 6999999999999998765432111 1224566777778888876 455444433 4555
Q ss_pred HHHHH
Q psy11160 162 AAESI 166 (598)
Q Consensus 162 ~~~~~ 166 (598)
..-.+
T Consensus 129 ~~t~~ 133 (324)
T 3gvi_A 129 AMVWA 133 (324)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54333
No 118
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.64 E-value=1.3e-07 Score=98.48 Aligned_cols=126 Identities=10% Similarity=0.108 Sum_probs=85.8
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
..+||+|||+|.||.++|..++. .|+ +|+++|+++++++.....
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~---------------------------~g~~~ev~L~Di~~~~~~g~a~D------- 65 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLM---------------------------KDLADEVALVDVMEDKLKGEMMD------- 65 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHH---------------------------HCCCSEEEEECSCHHHHHHHHHH-------
T ss_pred CCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCCeEEEEECCHHHHHHHHHH-------
Confidence 35799999999999999999998 454 999999999887753210
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
+.+........++..++|++ ++++||+||++.+.|.++..++.+ -..+.+.+++..+.|.++. ++.++++-| -|.
T Consensus 66 -L~~~~~~~~~~~i~~t~d~~-~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvvt-NPv 141 (330)
T 3ldh_A 66 -LEHGSLFLHTAKIVSGKDYS-VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELHP-ELG 141 (330)
T ss_dssp -HHHHGGGSCCSEEEEESSSC-SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEECS-SSH
T ss_pred -hhhhhhcccCCeEEEcCCHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeCC-Ccc
Confidence 11100000124577888997 599999999999999876543322 2334566777888888884 555554433 455
Q ss_pred HHHHHHH
Q psy11160 161 RAAESIM 167 (598)
Q Consensus 161 ~~~~~~~ 167 (598)
+..-.++
T Consensus 142 di~t~~~ 148 (330)
T 3ldh_A 142 TDKNKQD 148 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544333
No 119
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.60 E-value=1.6e-07 Score=98.44 Aligned_cols=120 Identities=18% Similarity=0.244 Sum_probs=80.3
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCHHHHHH----HHcCCCC
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSEERIRQ----WNSNKLP 77 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~~~~~~----~~~~~~~ 77 (598)
++||+|||+ |+||.++|..++. .| .+|+++|+++++++. ++.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~---------------------------~g~~~evvLiDi~~~k~~g~a~DL~~~~-- 58 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAM---------------------------MRLTPNLCLYDPFAVGLEGVAEEIRHCG-- 58 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHH---------------------------TTCCSCEEEECSCHHHHHHHHHHHHHHC--
T ss_pred CCEEEEECCCChHHHHHHHHHHh---------------------------cCCCCEEEEEeCCchhHHHHHHhhhhCc--
Confidence 579999998 9999999999998 45 589999999988775 44331
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCc-EEEEe
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNK-IVVEK 155 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~-ivv~~ 155 (598)
+ + ..++++++++.+++++||+||++.++|.++..++.+ -..+.+.+++..+.|.++.++.. +++.
T Consensus 59 ~--~----------~~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvv- 125 (343)
T 3fi9_A 59 F--E----------GLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIII- 125 (343)
T ss_dssp C--T----------TCCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEC-
T ss_pred C--C----------CCceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEe-
Confidence 1 1 135778899988999999999999988765432111 11234556667777777775554 3443
Q ss_pred cCCchHHHHHHH
Q psy11160 156 STVPVRAAESIM 167 (598)
Q Consensus 156 STv~~~~~~~~~ 167 (598)
|-|.++.-.++
T Consensus 126 -sNPvd~~t~i~ 136 (343)
T 3fi9_A 126 -FNPADITGLVT 136 (343)
T ss_dssp -SSSHHHHHHHH
T ss_pred -cCchHHHHHHH
Confidence 56777665554
No 120
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.54 E-value=8.5e-07 Score=96.85 Aligned_cols=86 Identities=14% Similarity=0.203 Sum_probs=61.5
Q ss_pred CceEEEECCChh-HHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYV-GGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~v-G~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+||+|||+|.+ |.++|..|+.+.+.+ ++.+|++||+++++++..+.-.
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l----------------------~~~eV~L~Di~~e~~~~~~~~~-------- 77 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEF----------------------PIRKLKLYDNDKERQDRIAGAC-------- 77 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTS----------------------CEEEEEEECSCHHHHHHHHHHH--------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCC----------------------CCCEEEEEeCCHHHHHHHHHHH--------
Confidence 469999999999 556787888810000 2789999999999988765210
Q ss_pred HHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCC
Q psy11160 84 DEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTK 120 (598)
Q Consensus 84 ~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~ 120 (598)
..++.. ..+.++++++|+.+++++||+||+++|.+..
T Consensus 78 ~~~l~~~~~~~~I~~t~D~~eal~~AD~VViaag~~~~ 115 (472)
T 1u8x_X 78 DVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKY 115 (472)
T ss_dssp HHHHHHHCTTSEEEEESCHHHHHSSCSEEEECCCTTHH
T ss_pred HHHhccCCCCCEEEEECCHHHHHcCCCEEEEcCCCccc
Confidence 111111 1235688899998899999999999988643
No 121
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.53 E-value=4e-07 Score=94.76 Aligned_cols=125 Identities=15% Similarity=0.234 Sum_probs=83.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||.++|..|+. .|+ +|+++|+++++++....- +
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~---------------------------~~~~~v~l~Di~~~~~~g~a~d--------L 49 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI---------------------------KQLGDVVLFDIAQGMPNGKALD--------L 49 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECSSSSHHHHHHHH--------H
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCceEEEEeCChHHHHHHHHH--------H
Confidence 4799999999999999999999 566 999999999887532210 0
Q ss_pred HHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 84 DEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 84 ~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.+.... ....+++.++++ +++++||+||++.+.|.++..++.+ -..+.+.+++..+.|.++. ++.++++- |-|.+
T Consensus 50 ~~~~~~~~~~~~v~~t~d~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd 126 (321)
T 3p7m_A 50 LQTCPIEGVDFKVRGTNDY-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICI-TNPLD 126 (321)
T ss_dssp HTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHH
T ss_pred HhhhhhcCCCcEEEEcCCH-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe-cCchH
Confidence 000000 012356777787 5899999999999988765432111 1124566777778888887 55555444 57777
Q ss_pred HHHHHH
Q psy11160 162 AAESIM 167 (598)
Q Consensus 162 ~~~~~~ 167 (598)
..-.++
T Consensus 127 ~~t~~~ 132 (321)
T 3p7m_A 127 IMVNML 132 (321)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 764444
No 122
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.53 E-value=8.6e-08 Score=100.93 Aligned_cols=106 Identities=8% Similarity=0.072 Sum_probs=78.7
Q ss_pred CceEEEECCChhHHHHHHHHH-HhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIA-LKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++|+|||+|.||..+|..++ . .|++|++||+++++.+...+
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~---------------------------~G~~V~~~d~~~~~~~~~~~---------- 205 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHG---------------------------LGMKLVYYDVAPADAETEKA---------- 205 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---------------------------TCCEEEEECSSCCCHHHHHH----------
T ss_pred CCEEEEEEECHHHHHHHHHHHHh---------------------------cCCEEEEECCCCcchhhHhh----------
Confidence 368999999999999999999 7 78999999998765543321
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.+...++++++++++||+|++++|...... .+. .+.+.+.++++.++|+.|+.++...
T Consensus 206 ---------~g~~~~~~l~ell~~aDvVil~vp~~~~t~-----------~li--~~~~l~~mk~gailin~srg~~vd~ 263 (348)
T 2w2k_A 206 ---------LGAERVDSLEELARRSDCVSVSVPYMKLTH-----------HLI--DEAFFAAMKPGSRIVNTARGPVISQ 263 (348)
T ss_dssp ---------HTCEECSSHHHHHHHCSEEEECCCCSGGGT-----------TCB--CHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred ---------cCcEEeCCHHHHhccCCEEEEeCCCChHHH-----------HHh--hHHHHhcCCCCCEEEECCCCchhCH
Confidence 013344578888999999999997643211 111 0245567899999999999988877
Q ss_pred HHHHHH
Q psy11160 164 ESIMNV 169 (598)
Q Consensus 164 ~~~~~~ 169 (598)
+.+...
T Consensus 264 ~aL~~a 269 (348)
T 2w2k_A 264 DALIAA 269 (348)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766653
No 123
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.52 E-value=4.8e-07 Score=94.01 Aligned_cols=124 Identities=15% Similarity=0.193 Sum_probs=79.8
Q ss_pred CCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHH----cCC
Q psy11160 2 VQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWN----SNK 75 (598)
Q Consensus 2 ~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~----~~~ 75 (598)
|++.+||+|||+|.+|.+++..|+. .++ +++++|+++++++... ...
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~---------------------------~~~~~el~L~Di~~~~~~g~~~dl~~~~ 54 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQ---------------------------QGIAEEFVIVDVVKDRTKGDALDLEDAQ 54 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECSSHHHHHHHHHHHHGGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHc---------------------------CCCCCEEEEEeCCchHHHHHHHHHHHHH
Confidence 4566899999999999999999998 343 8999999998887422 111
Q ss_pred CCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 76 LPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 76 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
++ ....+.+.+..+++++||+||++.+.|.++..++.+ ...+...+++..+.|.++. ++.++++
T Consensus 55 -~~-------------~~~~~v~~~~~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 119 (318)
T 1ez4_A 55 -AF-------------TAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLV 119 (318)
T ss_dssp -GG-------------SCCCEEEECCGGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred -Hh-------------cCCeEEEECCHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 11 012333334456899999999999988765322111 1123366777777777775 5555555
Q ss_pred ecCCchHHHHHHHH
Q psy11160 155 KSTVPVRAAESIMN 168 (598)
Q Consensus 155 ~STv~~~~~~~~~~ 168 (598)
- |-|.+..-.++.
T Consensus 120 ~-tNPv~~~t~~~~ 132 (318)
T 1ez4_A 120 A-ANPVDILTYATW 132 (318)
T ss_dssp C-SSSHHHHHHHHH
T ss_pred e-CCcHHHHHHHHH
Confidence 3 888888755554
No 124
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.52 E-value=4.7e-07 Score=94.38 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=78.7
Q ss_pred CCceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCHHH--HHHHHcCCCCC
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSEER--IRQWNSNKLPI 78 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~~~--~~~~~~~~~~~ 78 (598)
+.|||+|+| +|++|.+++..|+. .| ++|+++|++++. +..+.....
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~---------------------------~g~~~ev~l~Di~~~~~~~~dL~~~~~-- 57 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKM---------------------------NPLVSVLHLYDVVNAPGVTADISHMDT-- 57 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHH---------------------------CTTEEEEEEEESSSHHHHHHHHHTSCS--
T ss_pred CCCEEEEECCCChHHHHHHHHHHh---------------------------CCCCCEEEEEeCCCcHhHHHHhhcccc--
Confidence 457999999 79999999999998 66 899999998762 222332211
Q ss_pred CCCChHHHHhhhcCCceEE---ecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 79 YEPGLDEVVKKTRDVNLFF---STDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
...++. ++|+.+++++||+||++.+.|..+...+.+ ...+...++++++.+.+.. ++.+|++
T Consensus 58 -------------~~~v~~~~~t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv 123 (326)
T 1smk_A 58 -------------GAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL 123 (326)
T ss_dssp -------------SCEEEEEESHHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred -------------cceEEEEeCCCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE
Confidence 113444 457888999999999999988754321100 1122356667777777766 4555555
Q ss_pred ecCCchHHH
Q psy11160 155 KSTVPVRAA 163 (598)
Q Consensus 155 ~STv~~~~~ 163 (598)
+|.|.+++
T Consensus 124 -~SNPv~~~ 131 (326)
T 1smk_A 124 -ISNPVNST 131 (326)
T ss_dssp -CCSSHHHH
T ss_pred -ECCchHHH
Confidence 78999985
No 125
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.52 E-value=5.5e-07 Score=80.53 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=38.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
.|+|+|+|+|.+|..+|..|++ .|++|+++|+++++++.+.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~---------------------------~g~~v~~~d~~~~~~~~~~~ 45 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE---------------------------KGHDIVLIDIDKDICKKASA 45 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEEECCHHHHHHHHH
Confidence 4799999999999999999999 79999999999999988764
No 126
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.46 E-value=1.5e-06 Score=90.15 Aligned_cols=112 Identities=15% Similarity=0.225 Sum_probs=80.1
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCHHHHH--HHHcCCCCCCC
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSEERIR--QWNSNKLPIYE 80 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~~~~~--~~~~~~~~~~e 80 (598)
|||+|||+ |++|.+++..|+. .| .+|+++|+++.+.. .+....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~---------------------------~~~~~ev~L~Di~~~~~~a~dL~~~~----- 48 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKN---------------------------SPLVSRLTLYDIAHTPGVAADLSHIE----- 48 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHT---------------------------CTTCSEEEEEESSSHHHHHHHHTTSS-----
T ss_pred CEEEEECCCChHHHHHHHHHHh---------------------------CCCCcEEEEEeCCccHHHHHHHhccC-----
Confidence 59999998 9999999999998 55 79999999872222 222211
Q ss_pred CChHHHHhhhcCCceEE---ecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcch-----HHHHHHHHHHHHHcCCCcEE
Q psy11160 81 PGLDEVVKKTRDVNLFF---STDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADL-----KYVEAAARMIAEIATDNKIV 152 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~iv 152 (598)
...+++. ++|+++++++||+||++.+.|.++..+ ..|+ ..++++.+.|.++.+.. ++
T Consensus 49 ----------~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~----r~dl~~~n~~i~~~i~~~i~~~~p~a-~v 113 (314)
T 1mld_A 49 ----------TRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMT----RDDLFNTNATIVATLTAACAQHCPDA-MI 113 (314)
T ss_dssp ----------SSCEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCC----GGGGHHHHHHHHHHHHHHHHHHCTTS-EE
T ss_pred ----------cCceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCc----HHHHHHHHHHHHHHHHHHHHhhCCCe-EE
Confidence 0123555 357888999999999999988765332 2344 77888888888887444 44
Q ss_pred EEecCCchHHHHH
Q psy11160 153 VEKSTVPVRAAES 165 (598)
Q Consensus 153 v~~STv~~~~~~~ 165 (598)
++ .|-|.+..-.
T Consensus 114 iv-~sNPv~~~~~ 125 (314)
T 1mld_A 114 CI-ISNPVNSTIP 125 (314)
T ss_dssp EE-CSSCHHHHHH
T ss_pred EE-ECCCcchhHH
Confidence 44 4788887753
No 127
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.44 E-value=1.4e-07 Score=96.67 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=78.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||++++..+
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~--------------- 159 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKA---------------------------FGMRVIAYTRSSVDQN--------------- 159 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------HTCEEEEECSSCCCTT---------------
T ss_pred cchheeeccCchhHHHHHHHHh---------------------------hCcEEEEEeccccccc---------------
Confidence 3689999999999999999998 7999999999753321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
......++++++++||+|++++|......+ .. -+...+.++++.++|+.|+..+-..+
T Consensus 160 ---------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~ 217 (290)
T 3gvx_A 160 ---------VDVISESPADLFRQSDFVLIAIPLTDKTRG-----MV--------NSRLLANARKNLTIVNVARADVVSKP 217 (290)
T ss_dssp ---------CSEECSSHHHHHHHCSEEEECCCCCTTTTT-----CB--------SHHHHTTCCTTCEEEECSCGGGBCHH
T ss_pred ---------cccccCChHHHhhccCeEEEEeeccccchh-----hh--------hHHHHhhhhcCceEEEeehhcccCCc
Confidence 123456888899999999999984322111 11 14566789999999999999988887
Q ss_pred HHHHHH
Q psy11160 165 SIMNVL 170 (598)
Q Consensus 165 ~~~~~l 170 (598)
.+...|
T Consensus 218 aL~~aL 223 (290)
T 3gvx_A 218 DMIGFL 223 (290)
T ss_dssp HHHHHH
T ss_pred chhhhh
Confidence 777644
No 128
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.44 E-value=1.5e-07 Score=98.35 Aligned_cols=102 Identities=10% Similarity=0.169 Sum_probs=76.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..++. .|++|++||++++... +
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~----g---------- 202 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEA---------------------------FDCPISYFSRSKKPNT----N---------- 202 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEECSSCCTTC----C----------
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEECCCchhcc----C----------
Confidence 3689999999999999999998 7899999999764321 1
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.....++++++++||+|++++|...... .+. -+.+.+.++++.++|+.|+..+-..+
T Consensus 203 ----------~~~~~~l~ell~~aDvVil~vP~~~~t~-----------~li--~~~~l~~mk~gailIn~srG~~vd~~ 259 (333)
T 3ba1_A 203 ----------YTYYGSVVELASNSDILVVACPLTPETT-----------HII--NREVIDALGPKGVLINIGRGPHVDEP 259 (333)
T ss_dssp ----------SEEESCHHHHHHTCSEEEECSCCCGGGT-----------TCB--CHHHHHHHCTTCEEEECSCGGGBCHH
T ss_pred ----------ceecCCHHHHHhcCCEEEEecCCChHHH-----------HHh--hHHHHhcCCCCCEEEECCCCchhCHH
Confidence 2345678888999999999997642211 111 02345577899999999999888777
Q ss_pred HHHHHH
Q psy11160 165 SIMNVL 170 (598)
Q Consensus 165 ~~~~~l 170 (598)
.+...|
T Consensus 260 aL~~aL 265 (333)
T 3ba1_A 260 ELVSAL 265 (333)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776643
No 129
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.43 E-value=1.2e-06 Score=91.46 Aligned_cols=127 Identities=16% Similarity=0.173 Sum_probs=85.0
Q ss_pred CCCCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-------ceEEEEeCC----HHHH
Q psy11160 1 MVQTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-------IQVTVVDKS----EERI 68 (598)
Q Consensus 1 m~~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~v~~~d~~----~~~~ 68 (598)
|.++.|||+|+|+ |++|.+++..|+. .| .+|.++|++ +++.
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~---------------------------~~~~~~~~~~ev~l~Di~~~~~~~~~ 53 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIAN---------------------------GDMLGKDQPVILQLLEIPNEKAQKAL 53 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHT---------------------------TTTTCTTCCEEEEEECCSCHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHh---------------------------CCCcCCCCCCEEEEEcCCCccccccc
Confidence 5445689999998 9999999999988 44 389999999 6655
Q ss_pred HH----HHcCCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCC-CCCcchHHHHHHHHHHH
Q psy11160 69 RQ----WNSNKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGK-GRAADLKYVEAAARMIA 143 (598)
Q Consensus 69 ~~----~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~-~~~~~~~~~~~~~~~i~ 143 (598)
+. +..+..++ ...++.+++..+++++||+||++.+.|..+..++. ....+...+++.++.+.
T Consensus 54 ~g~~~dl~~~~~~~-------------~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~ 120 (329)
T 1b8p_A 54 QGVMMEIDDCAFPL-------------LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID 120 (329)
T ss_dssp HHHHHHHHTTTCTT-------------EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhhhcccc-------------cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 43 34321111 12467788988899999999999887765322100 01123455667777777
Q ss_pred HHcCCCcEEEEecCCchHHHHHHHH
Q psy11160 144 EIATDNKIVVEKSTVPVRAAESIMN 168 (598)
Q Consensus 144 ~~~~~~~ivv~~STv~~~~~~~~~~ 168 (598)
++..++.++++-| .|.+..-.++.
T Consensus 121 ~~~~p~a~ii~~S-NPv~~~t~~~~ 144 (329)
T 1b8p_A 121 AVASRNIKVLVVG-NPANTNAYIAM 144 (329)
T ss_dssp HHSCTTCEEEECS-SSHHHHHHHHH
T ss_pred HhcCCCeEEEEcc-CchHHHHHHHH
Confidence 7764565666555 77777755554
No 130
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.42 E-value=1.7e-06 Score=89.66 Aligned_cols=129 Identities=12% Similarity=0.078 Sum_probs=79.9
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+++||+|||+|.||.++|..++. ++...+|+++|+++++.+..... +
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~-------------------------~~~~~ev~l~Di~~~~~~~~~~d--------l 51 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMN-------------------------QGIADEIVLIDANESKAIGDAMD--------F 51 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-------------------------HTCCSEEEEECSSHHHHHHHHHH--------H
T ss_pred CCCEEEEECcCHHHHHHHHHHHh-------------------------CCCCCEEEEEeCCcchHHHHHhh--------H
Confidence 45799999999999999999988 11124899999999876643211 1
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.+... ......+.+++..+++++||+||+++|.|..+...+.+ -..+.+.++++.+.+.++. ++.++++ -|-|.+.
T Consensus 52 ~~~~~-~~~~~~~i~~~~~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv-~tNPv~~ 128 (316)
T 1ldn_A 52 NHGKV-FAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLV-ATNPVDI 128 (316)
T ss_dssp HHHTT-SSSSCCEEEECCGGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEE-CSSSHHH
T ss_pred HHHhh-hcCCCeEEEcCcHHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEE-eCCchHH
Confidence 11000 01112333344456899999999999888765321111 1122355666677777776 5555544 3667777
Q ss_pred HHHHHH
Q psy11160 163 AESIMN 168 (598)
Q Consensus 163 ~~~~~~ 168 (598)
.-.++.
T Consensus 129 ~~~~~~ 134 (316)
T 1ldn_A 129 LTYATW 134 (316)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 131
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.40 E-value=8.6e-07 Score=92.43 Aligned_cols=122 Identities=17% Similarity=0.192 Sum_probs=78.8
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCHHHHHHHH----cCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSEERIRQWN----SNKLP 77 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~~~~~~~~----~~~~~ 77 (598)
+.+||+|||+|.||.+++..|+. .+ -+++++|+++++++... ... +
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~---------------------------~~~~~el~L~Di~~~~~~g~~~dl~~~~-~ 59 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVL---------------------------QGIAQEIGIVDIFKDKTKGDAIDLSNAL-P 59 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECSCHHHHHHHHHHHHTTG-G
T ss_pred CCCEEEEECCCHHHHHHHHHHHc---------------------------CCCCCEEEEEeCCchHhHHHHHHHHHHH-H
Confidence 35799999999999999999988 33 38999999998876532 211 1
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
+ ....+++.+..+++++||+||++.+.|.++..++.+ ...+...+++..+.|.++. ++.++++-
T Consensus 60 ~-------------~~~~~i~~~~~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~- 124 (326)
T 2zqz_A 60 F-------------TSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA- 124 (326)
T ss_dssp G-------------SCCCEEEECCGGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC-
T ss_pred h-------------cCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-
Confidence 1 012333334456899999999999888754321000 0112356677777777775 55555553
Q ss_pred CCchHHHHHHHH
Q psy11160 157 TVPVRAAESIMN 168 (598)
Q Consensus 157 Tv~~~~~~~~~~ 168 (598)
|-|.+..-.++.
T Consensus 125 tNPv~~~t~~~~ 136 (326)
T 2zqz_A 125 ANPVDILTYATW 136 (326)
T ss_dssp SSSHHHHHHHHH
T ss_pred CCcHHHHHHHHH
Confidence 888888755554
No 132
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.40 E-value=4.7e-06 Score=90.26 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=69.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC------CceEEEEeCCHH-HHHHHH-cCCCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP------NIQVTVVDKSEE-RIRQWN-SNKLP 77 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~v~~~d~~~~-~~~~~~-~~~~~ 77 (598)
+||+|||+|.||.++|..|.+ . |++|++.+++.+ ..+... .|...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~---------------------------s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v 107 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRD---------------------------SLAEAKSDIVVKIGLRKGSKSFDEARAAGFTE 107 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHH---------------------------HHHHTTCCCEEEEEECTTCSCHHHHHHTTCCT
T ss_pred CEEEEEeEhHHHHHHHHHHHh---------------------------cccccCCCCEEEEEeCCchhhHHHHHHCCCEE
Confidence 799999999999999999999 6 889887665432 233222 23110
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
. . ....++.+++++||+||++||.. ...+++++|.+.++++++|.+.+-
T Consensus 108 ~--------------d--~ta~s~aEAa~~ADVVILaVP~~---------------~~~eVl~eI~p~LK~GaILs~AaG 156 (525)
T 3fr7_A 108 E--------------S--GTLGDIWETVSGSDLVLLLISDA---------------AQADNYEKIFSHMKPNSILGLSHG 156 (525)
T ss_dssp T--------------T--TCEEEHHHHHHHCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEESSS
T ss_pred e--------------c--CCCCCHHHHHhcCCEEEECCChH---------------HHHHHHHHHHHhcCCCCeEEEeCC
Confidence 0 0 01246788999999999998642 234567789999999999876655
Q ss_pred CchH
Q psy11160 158 VPVR 161 (598)
Q Consensus 158 v~~~ 161 (598)
+...
T Consensus 157 f~I~ 160 (525)
T 3fr7_A 157 FLLG 160 (525)
T ss_dssp HHHH
T ss_pred CCHH
Confidence 5443
No 133
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.40 E-value=2.1e-06 Score=93.09 Aligned_cols=158 Identities=13% Similarity=0.121 Sum_probs=96.2
Q ss_pred CCCCCceEEEECCChh--HHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGAGYV--GGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~G~v--G~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~ 78 (598)
|..+.+||+|||+|.| |..++..|+.. +.+ .| +|++||+++++++.++.-...+
T Consensus 1 m~m~~~KIaVIGaGs~g~g~~la~~l~~~-~~~----------------------~g-eV~L~Di~~e~le~~~~~~~~l 56 (450)
T 3fef_A 1 MSLDQIKIAYIGGGSQGWARSLMSDLSID-ERM----------------------SG-TVALYDLDFEAAQKNEVIGNHS 56 (450)
T ss_dssp --CCCEEEEEETTTCSSHHHHHHHHHHHC-SSC----------------------CE-EEEEECSSHHHHHHHHHHHTTS
T ss_pred CCCCCCEEEEECCChhHhHHHHHHHHHhc-ccc----------------------CC-eEEEEeCCHHHHHHHHHHHHHH
Confidence 4334579999999997 57888888871 111 46 9999999999987665311111
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC------------CCCCCCCCC---CCC--------cchHHH
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT------------PTKTFGNGK---GRA--------ADLKYV 135 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t------------p~~~~~~~~---~~~--------~~~~~~ 135 (598)
.. ...++++|+|+++|+++||+||++++. |.+..-.+. ... -....+
T Consensus 57 ~~----------~~~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~ 126 (450)
T 3fef_A 57 GN----------GRWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIF 126 (450)
T ss_dssp TT----------SCEEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHH
T ss_pred hc----------cCCeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHH
Confidence 11 224688999999999999999999963 333221100 000 233456
Q ss_pred HHHHHHHHHHcCCCcEEEEecCCchHHHHHHHHHHhhccCCcccccCCCCCchHHHHHHHHHHHHhcCCceEEEeccccc
Q psy11160 136 EAAARMIAEIATDNKIVVEKSTVPVRAAESIMNVLKANHKTNVQFQGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 215 (598)
Q Consensus 136 ~~~~~~i~~~~~~~~ivv~~STv~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~~l~~A~~~Ia~~l~~~~lvv~eSTvP~ 215 (598)
.++++.|.+..+..-+++. |-|.+..-.. +.+. .++.-|+=-++.|.
T Consensus 127 ~~i~~~i~~~~p~a~~i~~--tNPvdi~t~~------------------------------~~k~-~p~~rviG~C~~~~ 173 (450)
T 3fef_A 127 AEIARAIRDYAPESWVINY--TNPMSVCTRV------------------------------LYKV-FPGIKAIGCCHEVF 173 (450)
T ss_dssp HHHHHHHHHHCTTSEEEEC--CSSHHHHHHH------------------------------HHHH-CTTCEEEECCSHHH
T ss_pred HHHHHHHHHHCCCeEEEEe--cCchHHHHHH------------------------------HHHH-CCCCCEEEeCCcHH
Confidence 7777777777644444443 3444332111 1122 24445566678888
Q ss_pred hhhhhHHHHH
Q psy11160 216 RAAESIMNVL 225 (598)
Q Consensus 216 gtt~~~~~~L 225 (598)
++.+.+.+.|
T Consensus 174 ~~~~~~a~~l 183 (450)
T 3fef_A 174 GTQKLLAEMV 183 (450)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877776666
No 134
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.40 E-value=5.1e-07 Score=95.06 Aligned_cols=105 Identities=9% Similarity=0.094 Sum_probs=77.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||++.........
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~----------- 201 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRA---------------------------FGMNVLVWGRENSKERARAD----------- 201 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSHHHHHHHHHT-----------
T ss_pred CCEEEEEeECHHHHHHHHHHHh---------------------------CCCEEEEECCCCCHHHHHhc-----------
Confidence 3689999999999999999998 79999999998644222222
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+.....++++++++||+|++++|......+ .. -+...+.++++.++|+.|+.++-..+
T Consensus 202 ---------g~~~~~~l~ell~~aDiV~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~ 259 (352)
T 3gg9_A 202 ---------GFAVAESKDALFEQSDVLSVHLRLNDETRS-----II--------TVADLTRMKPTALFVNTSRAELVEEN 259 (352)
T ss_dssp ---------TCEECSSHHHHHHHCSEEEECCCCSTTTTT-----CB--------CHHHHTTSCTTCEEEECSCGGGBCTT
T ss_pred ---------CceEeCCHHHHHhhCCEEEEeccCcHHHHH-----hh--------CHHHHhhCCCCcEEEECCCchhhcHH
Confidence 234556888899999999999975332111 11 13456778999999999998776666
Q ss_pred HHHHH
Q psy11160 165 SIMNV 169 (598)
Q Consensus 165 ~~~~~ 169 (598)
.+...
T Consensus 260 aL~~a 264 (352)
T 3gg9_A 260 GMVTA 264 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 56553
No 135
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.39 E-value=1e-06 Score=92.00 Aligned_cols=122 Identities=12% Similarity=0.199 Sum_probs=82.3
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHH----HcCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQW----NSNKLP 77 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~----~~~~~~ 77 (598)
..+||+|||+|.||.++|..|+. .|+ +|+++|+++++++.. +... +
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~---------------------------~~~~~el~L~Di~~~~~~g~a~DL~~~~-~ 69 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILM---------------------------KDLADELALVDVIEDKLKGEMMDLQHGS-L 69 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHH---------------------------TTCCSEEEEECSCHHHHHHHHHHHHHTG-G
T ss_pred CCCEEEEECCCHHHHHHHHHHHh---------------------------CCCCceEEEEeCChHHHHHHHHhhhhhh-h
Confidence 35799999999999999999999 555 999999999887753 3221 1
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
+. ....+..++|++ ++++||+||++.+.|.++..++.+ -..+...+++..+.|.++. ++.++++-
T Consensus 70 ~~-----------~~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvv- 135 (331)
T 4aj2_A 70 FL-----------KTPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIV- 135 (331)
T ss_dssp GC-----------SCCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC-
T ss_pred cc-----------CCCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-
Confidence 10 012456678886 799999999999988776543222 1223456677777888874 44444443
Q ss_pred CCchHHHHHHH
Q psy11160 157 TVPVRAAESIM 167 (598)
Q Consensus 157 Tv~~~~~~~~~ 167 (598)
|-|....-.++
T Consensus 136 tNPvdi~t~~~ 146 (331)
T 4aj2_A 136 SNPVDILTYVA 146 (331)
T ss_dssp SSSHHHHHHHH
T ss_pred cChHHHHHHHH
Confidence 34655543333
No 136
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.39 E-value=3.4e-07 Score=95.77 Aligned_cols=103 Identities=8% Similarity=0.159 Sum_probs=75.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..++. .|++|++||+++++ +...+
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~---------------------------~G~~V~~~d~~~~~-~~~~~----------- 186 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIP---------------------------FGVKLYYWSRHRKV-NVEKE----------- 186 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG---------------------------GTCEEEEECSSCCH-HHHHH-----------
T ss_pred cCEEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEECCCcch-hhhhh-----------
Confidence 3689999999999999999988 78999999998776 32221
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.+...+ ++++++++||+|++++|......+ +.. +.+.+.++++ ++++.|+..+-..+
T Consensus 187 --------~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~-----------~i~--~~~~~~mk~g-ilin~srg~~vd~~ 243 (333)
T 2d0i_A 187 --------LKARYM-DIDELLEKSDIVILALPLTRDTYH-----------IIN--EERVKKLEGK-YLVNIGRGALVDEK 243 (333)
T ss_dssp --------HTEEEC-CHHHHHHHCSEEEECCCCCTTTTT-----------SBC--HHHHHHTBTC-EEEECSCGGGBCHH
T ss_pred --------cCceec-CHHHHHhhCCEEEEcCCCChHHHH-----------HhC--HHHHhhCCCC-EEEECCCCcccCHH
Confidence 023333 777889999999999987532111 110 2345678899 99999998887776
Q ss_pred HHHHH
Q psy11160 165 SIMNV 169 (598)
Q Consensus 165 ~~~~~ 169 (598)
.+...
T Consensus 244 aL~~a 248 (333)
T 2d0i_A 244 AVTEA 248 (333)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 137
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.39 E-value=1.8e-06 Score=93.79 Aligned_cols=131 Identities=14% Similarity=0.174 Sum_probs=80.3
Q ss_pred CCCCCceEEEECCChh-HHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH--HHHHHHHcCCCC
Q psy11160 1 MVQTISHICCIGAGYV-GGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE--ERIRQWNSNKLP 77 (598)
Q Consensus 1 m~~~~~~I~viG~G~v-G~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~--~~~~~~~~~~~~ 77 (598)
||++.+||+|||+|.+ |.+++..|+.+.+.+ ++.+|++||+++ ++++..+.-.
T Consensus 3 ~m~~~~KIaVIGaGsv~~~al~~~L~~~~~~l----------------------~~~ev~L~Di~~~~e~~~~~~~~~-- 58 (450)
T 1s6y_A 3 AMDKRLKIATIGGGSSYTPELVEGLIKRYHEL----------------------PVGELWLVDIPEGKEKLEIVGALA-- 58 (450)
T ss_dssp ----CEEEEEETTTCTTHHHHHHHHHHTTTTC----------------------CEEEEEEECCGGGHHHHHHHHHHH--
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHcCCCCC----------------------CCCEEEEEEcCCChHHHHHHHHHH--
Confidence 3444679999999999 888888888710000 268999999999 9887754210
Q ss_pred CCCCChHHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCC------------C---------CCcchHHH
Q psy11160 78 IYEPGLDEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGK------------G---------RAADLKYV 135 (598)
Q Consensus 78 ~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~------------~---------~~~~~~~~ 135 (598)
..++.. ..+.++++++|+.+++++||+||+++|.+..+..++. + ..-....+
T Consensus 59 ------~~~~~~~~~~~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~ 132 (450)
T 1s6y_A 59 ------KRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVI 132 (450)
T ss_dssp ------HHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHH
T ss_pred ------HHHHhhcCCCcEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHH
Confidence 111111 1234688889998899999999999987653210000 0 00112456
Q ss_pred HHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 136 EAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 136 ~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
+++++.|.++. |+.+++ -.|-|.+..
T Consensus 133 ~~i~~~i~~~~-P~a~ii-~~tNPvdiv 158 (450)
T 1s6y_A 133 LDIIRDMEELC-PDAWLI-NFTNPAGMV 158 (450)
T ss_dssp HHHHHHHHHHC-TTCEEE-ECSSSHHHH
T ss_pred HHHHHHHHHHC-CCeEEE-EeCCcHHHH
Confidence 67777777766 444444 366666553
No 138
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.39 E-value=4.9e-06 Score=90.86 Aligned_cols=129 Identities=19% Similarity=0.188 Sum_probs=82.9
Q ss_pred CceEEEECCChhH--HHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVG--GPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG--~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
.+||+|||+|.|| .++|..|+.. . ++ +|++|++||+++++++..+..
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----------~-----------~l--~~~eV~L~Di~~e~l~~~~~~-------- 51 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----------P-----------GL--SGSTVTLMDIDEERLDAILTI-------- 51 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----------G-----------GG--TTCEEEEECSCHHHHHHHHHH--------
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----------C-----------cC--CCCEEEEEeCCHHHHHHHHHH--------
Confidence 4799999999975 5557777750 0 01 389999999999998876531
Q ss_pred hHHHHhh-hcCCceEEecCHHHHhccCcEEEEecCCC------------CCCCCCC---CC------------CCcchHH
Q psy11160 83 LDEVVKK-TRDVNLFFSTDIKSAIQKAQLIFISVNTP------------TKTFGNG---KG------------RAADLKY 134 (598)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~~~~~~adviii~v~tp------------~~~~~~~---~~------------~~~~~~~ 134 (598)
...++.. ....++++++|+.+++++||+||+++|.+ .+.+-.+ .. ..-.+..
T Consensus 52 ~~~~l~~~~~~~~I~~ttD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i 131 (480)
T 1obb_A 52 AKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKY 131 (480)
T ss_dssp HHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHH
T ss_pred HHHHhccCCCCcEEEEECCHHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHH
Confidence 1122211 12357888999988999999999999752 1111000 00 1123467
Q ss_pred HHHHHHHHHHHcCCCcEEEEecCCchHHHHHH
Q psy11160 135 VEAAARMIAEIATDNKIVVEKSTVPVRAAESI 166 (598)
Q Consensus 135 ~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~~ 166 (598)
++++++.|.++.+ +.++ +-.|-|.+..-++
T Consensus 132 ~~~i~~~i~~~~P-~A~i-i~~TNPvdi~t~~ 161 (480)
T 1obb_A 132 FVDIARKIEKLSP-KAWY-LQAANPIFEGTTL 161 (480)
T ss_dssp HHHHHHHHHHHCT-TCEE-EECSSCHHHHHHH
T ss_pred HHHHHHHHHHHCC-CeEE-EEeCCcHHHHHHH
Confidence 7888888888774 4544 3477777765333
No 139
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.39 E-value=6.8e-07 Score=93.13 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=74.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHH----cCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWN----SNKLPI 78 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~----~~~~~~ 78 (598)
.+||+|||+|.||.++|..|+. .|+ +++++|+++++++... ... ++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~---------------------------~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~ 60 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVL---------------------------QGIAQEIGIVDIFKDKTKGDAIDLEDAL-PF 60 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECSCHHHHHHHHHHHHTTG-GG
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCCCeEEEEeCChHHHHHHHhhHhhhh-hh
Confidence 4799999999999999999998 454 9999999999887433 221 11
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
. ...+.+++..+++++||+||++.+.|.++..++.+ -..+...+++..+.|.++.+ +.++++- |
T Consensus 61 ~-------------~~~~i~~~~~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-t 125 (326)
T 3vku_A 61 T-------------SPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-A 125 (326)
T ss_dssp S-------------CCCEEEECCGGGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEEC-S
T ss_pred c-------------CCcEEEECcHHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-c
Confidence 0 12334444445899999999999988765443222 12344567777788887765 4444443 4
Q ss_pred CchHHHHHHH
Q psy11160 158 VPVRAAESIM 167 (598)
Q Consensus 158 v~~~~~~~~~ 167 (598)
-|....-.++
T Consensus 126 NPvdi~t~~~ 135 (326)
T 3vku_A 126 NPVDILTYAT 135 (326)
T ss_dssp SSHHHHHHHH
T ss_pred CchHHHHHHH
Confidence 5666554443
No 140
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.37 E-value=5.4e-07 Score=93.43 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=75.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||+++++......|
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~g---------- 184 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANA---------------------------MGMKVLAYDILDIREKAEKIN---------- 184 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCHHHHHHTT----------
T ss_pred CCEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEECCCcchhHHHhcC----------
Confidence 3689999999999999999998 799999999987764321222
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
... .++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..+
T Consensus 185 ----------~~~-~~l~ell~~aDvVvl~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~ 240 (313)
T 2ekl_A 185 ----------AKA-VSLEELLKNSDVISLHVTVSKDAKP-----IID--------YPQFELMKDNVIIVNTSRAVAVNGK 240 (313)
T ss_dssp ----------CEE-CCHHHHHHHCSEEEECCCCCTTSCC-----SBC--------HHHHHHSCTTEEEEESSCGGGBCHH
T ss_pred ----------cee-cCHHHHHhhCCEEEEeccCChHHHH-----hhC--------HHHHhcCCCCCEEEECCCCcccCHH
Confidence 222 3677889999999999986432211 111 3455678999999999998776665
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 241 aL~~ 244 (313)
T 2ekl_A 241 ALLD 244 (313)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 141
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.37 E-value=1.7e-06 Score=89.55 Aligned_cols=124 Identities=19% Similarity=0.223 Sum_probs=83.5
Q ss_pred eEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 7 HICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 7 ~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
||+|||+|.||.++|..++. .|+ +|+++|+++++++.... .+.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~---------------------------~~l~el~L~Di~~~~~~g~~~--------dl~~ 45 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM---------------------------RGYDDLLLIARTPGKPQGEAL--------DLAH 45 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH---------------------------HTCSCEEEECSSTTHHHHHHH--------HHHH
T ss_pred CEEEECcCHHHHHHHHHHHh---------------------------CCCCEEEEEcCChhhHHHHHH--------HHHH
Confidence 79999999999999999998 455 79999999888764321 0111
Q ss_pred HHh-hhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 86 VVK-KTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 86 ~~~-~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
... .....+++.++|+ +++++||+||++.+.|.++..++.+ -..+...++++++.|.++. ++.++++- |-|.+..
T Consensus 46 ~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~ 122 (308)
T 2d4a_B 46 AAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVIT-TNPVDAM 122 (308)
T ss_dssp HHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHH
T ss_pred hhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCchHHH
Confidence 100 0112457777888 5899999999999988765432111 1223455777778888876 55555553 6688776
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
-.++.
T Consensus 123 t~~~~ 127 (308)
T 2d4a_B 123 TYVMY 127 (308)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 142
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.36 E-value=7.7e-07 Score=93.25 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=66.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++++.
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~---------------- 207 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEA---------------------------FGMSVRYWNRSTLSG---------------- 207 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECSSCCTT----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEcCCcccc----------------
Confidence 3789999999999999999988 799999999975430
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH-HHHHHHcCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA-RMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.......++++++++||+|++++|.... .+..+ +...+.++++.++|+.|+..+-..
T Consensus 208 --------~~~~~~~sl~ell~~aDvVil~vP~t~~--------------t~~li~~~~l~~mk~gailIN~aRG~vvde 265 (340)
T 4dgs_A 208 --------VDWIAHQSPVDLARDSDVLAVCVAASAA--------------TQNIVDASLLQALGPEGIVVNVARGNVVDE 265 (340)
T ss_dssp --------SCCEECSSHHHHHHTCSEEEECC------------------------CHHHHHHTTTTCEEEECSCC-----
T ss_pred --------cCceecCCHHHHHhcCCEEEEeCCCCHH--------------HHHHhhHHHHhcCCCCCEEEECCCCcccCH
Confidence 0123456888899999999999974321 12222 566778999999999999988776
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
+.+..
T Consensus 266 ~aL~~ 270 (340)
T 4dgs_A 266 DALIE 270 (340)
T ss_dssp -----
T ss_pred HHHHH
Confidence 66655
No 143
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.36 E-value=5.6e-07 Score=93.58 Aligned_cols=104 Identities=12% Similarity=0.117 Sum_probs=74.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeC-CHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDK-SEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~-~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++|+|||+|.||.++|..+.. .|++|++||+ +++.......|
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~~g--------- 189 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQG---------------------------FDMDIDYFDTHRASSSDEASYQ--------- 189 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECSSCCCHHHHHHHT---------
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEECCCCcChhhhhhcC---------
Confidence 3689999999999999999988 7899999999 76653221112
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.....++++++++||+|++++|......+ . + -+...+.++++.++|+.|+..+-..
T Consensus 190 -----------~~~~~~l~ell~~aDvVil~~p~~~~t~~-----~-----i---~~~~l~~mk~gailIn~arg~~vd~ 245 (320)
T 1gdh_A 190 -----------ATFHDSLDSLLSVSQFFSLNAPSTPETRY-----F-----F---NKATIKSLPQGAIVVNTARGDLVDN 245 (320)
T ss_dssp -----------CEECSSHHHHHHHCSEEEECCCCCTTTTT-----C-----B---SHHHHTTSCTTEEEEECSCGGGBCH
T ss_pred -----------cEEcCCHHHHHhhCCEEEEeccCchHHHh-----h-----c---CHHHHhhCCCCcEEEECCCCcccCH
Confidence 23445788889999999999875432110 0 1 1345677899999999999766555
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
+.+..
T Consensus 246 ~aL~~ 250 (320)
T 1gdh_A 246 ELVVA 250 (320)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54544
No 144
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.35 E-value=5.8e-07 Score=94.57 Aligned_cols=106 Identities=14% Similarity=0.180 Sum_probs=78.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++...+...+
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~----------- 205 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKP---------------------------FGCNLLYHDRLQMAPELEKE----------- 205 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG---------------------------GCCEEEEECSSCCCHHHHHH-----------
T ss_pred CCEEeEEEeCHHHHHHHHHHHH---------------------------CCCEEEEeCCCccCHHHHHh-----------
Confidence 3689999999999999999988 78999999997544333321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.+.....++++.+++||+|++++|......+ .. -+...+.++++.++|+.|+.++-..+
T Consensus 206 --------~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vde~ 264 (351)
T 3jtm_A 206 --------TGAKFVEDLNEMLPKCDVIVINMPLTEKTRG-----MF--------NKELIGKLKKGVLIVNNARGAIMERQ 264 (351)
T ss_dssp --------HCCEECSCHHHHGGGCSEEEECSCCCTTTTT-----CB--------SHHHHHHSCTTEEEEECSCGGGBCHH
T ss_pred --------CCCeEcCCHHHHHhcCCEEEECCCCCHHHHH-----hh--------cHHHHhcCCCCCEEEECcCchhhCHH
Confidence 0234456788899999999999985322211 11 13456778999999999998887776
Q ss_pred HHHHH
Q psy11160 165 SIMNV 169 (598)
Q Consensus 165 ~~~~~ 169 (598)
.+...
T Consensus 265 aL~~a 269 (351)
T 3jtm_A 265 AVVDA 269 (351)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 145
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.32 E-value=7.2e-07 Score=92.49 Aligned_cols=124 Identities=15% Similarity=0.203 Sum_probs=74.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|||+|||+|.||.++|..|+. .|+ +|+++|+++++++.... ++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~---------------------------~~~~~el~l~D~~~~k~~g~a~--------DL 45 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVAR---------------------------QDVAKEVVMVDIKDGMPQGKAL--------DM 45 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HTCSSEEEEECSSTTHHHHHHH--------HH
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCCEEEEEeCchHHHHHHHH--------HH
Confidence 699999999999999999998 454 99999999988663221 01
Q ss_pred HHHHhhh-cCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 84 DEVVKKT-RDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.+..... ...++..+.++ +++++||+||++.+.|.++..++.+ -..+...+++..+.|.++. |+.++++- |-|..
T Consensus 46 ~~~~~~~~~~~~v~~~~~~-~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd 122 (314)
T 3nep_X 46 RESSPIHGFDTRVTGTNDY-GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVV-ANPLD 122 (314)
T ss_dssp HHHHHHHTCCCEEEEESSS-GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEEC-CSSHH
T ss_pred hccccccCCCcEEEECCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEec-CCchh
Confidence 1110000 11235545555 5899999999999998765432111 1223455666667777765 44554443 35666
Q ss_pred HHHHHH
Q psy11160 162 AAESIM 167 (598)
Q Consensus 162 ~~~~~~ 167 (598)
+.-.++
T Consensus 123 ~~t~~~ 128 (314)
T 3nep_X 123 VMTYVA 128 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 654443
No 146
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.32 E-value=5.1e-07 Score=94.91 Aligned_cols=105 Identities=9% Similarity=0.053 Sum_probs=76.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||++.+.......
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~----------- 209 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKA---------------------------FGFNVLFYDPYLSDGVERAL----------- 209 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECTTSCTTHHHHH-----------
T ss_pred CCEEEEEeECHHHHHHHHHHHH---------------------------CCCEEEEECCCcchhhHhhc-----------
Confidence 3689999999999999999988 79999999986542111111
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+.....++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..+
T Consensus 210 ---------g~~~~~~l~ell~~aDvV~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~~vd~~ 267 (347)
T 1mx3_A 210 ---------GLQRVSTLQDLLFHSDCVTLHCGLNEHNHH-----LIN--------DFTVKQMRQGAFLVNTARGGLVDEK 267 (347)
T ss_dssp ---------TCEECSSHHHHHHHCSEEEECCCCCTTCTT-----SBS--------HHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred ---------CCeecCCHHHHHhcCCEEEEcCCCCHHHHH-----HhH--------HHHHhcCCCCCEEEECCCChHHhHH
Confidence 123445788899999999999876432111 111 3455678999999999999887777
Q ss_pred HHHHH
Q psy11160 165 SIMNV 169 (598)
Q Consensus 165 ~~~~~ 169 (598)
.+...
T Consensus 268 aL~~a 272 (347)
T 1mx3_A 268 ALAQA 272 (347)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 147
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.31 E-value=2.8e-06 Score=87.94 Aligned_cols=123 Identities=15% Similarity=0.200 Sum_probs=80.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc---CCCCCCCCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS---NKLPIYEPG 82 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~---~~~~~~e~~ 82 (598)
|||+|||+|+||.+++..|+. ++...+++++|+++++++.... ...++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-------------------------~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~--- 52 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-------------------------LGVAREVVLVDLDRKLAQAHAEDILHATPFA--- 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-------------------------TTCCSEEEEECSSHHHHHHHHHHHHTTGGGS---
T ss_pred CEEEEECCCHHHHHHHHHHHh-------------------------CCCCCEEEEEeCChhHHHHHHHHHHHhHhhc---
Confidence 699999999999999999998 1122599999999988774221 000100
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
...+++. ++ .+++++||+||++.+.|.++..++.+ ...+...+++..+.|.++. ++.++++- |-|.+
T Consensus 53 --------~~~~v~~-~~-~~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~ 120 (310)
T 2xxj_A 53 --------HPVWVWA-GS-YGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVA-TNPVD 120 (310)
T ss_dssp --------CCCEEEE-CC-GGGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHH
T ss_pred --------CCeEEEE-CC-HHHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEe-cCchH
Confidence 0123443 34 56899999999999988765321000 0112456667777777775 55555553 88888
Q ss_pred HHHHHHH
Q psy11160 162 AAESIMN 168 (598)
Q Consensus 162 ~~~~~~~ 168 (598)
..-.++.
T Consensus 121 ~~t~~~~ 127 (310)
T 2xxj_A 121 VMTQVAY 127 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765554
No 148
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.31 E-value=1.3e-06 Score=91.46 Aligned_cols=102 Identities=12% Similarity=0.164 Sum_probs=76.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||+++..... ..|
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~~~-~~g---------- 182 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLA---------------------------FGMKVLCYDVVKREDLK-EKG---------- 182 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCHHHH-HTT----------
T ss_pred CceEEEECcCHHHHHHHHHHHH---------------------------CcCEEEEECCCcchhhH-hcC----------
Confidence 3689999999999999999998 79999999998765432 212
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
... .++++++++||+|++++|......+ .. -+...+.++++.++|+.|+..+-..+
T Consensus 183 ----------~~~-~~l~ell~~aDvV~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~ 238 (334)
T 2pi1_A 183 ----------CVY-TSLDELLKESDVISLHVPYTKETHH-----MI--------NEERISLMKDGVYLINTARGKVVDTD 238 (334)
T ss_dssp ----------CEE-CCHHHHHHHCSEEEECCCCCTTTTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHH
T ss_pred ----------cee-cCHHHHHhhCCEEEEeCCCChHHHH-----hh--------CHHHHhhCCCCcEEEECCCCcccCHH
Confidence 222 3488899999999999885322211 11 13456788999999999998887776
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 239 aL~~ 242 (334)
T 2pi1_A 239 ALYR 242 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 149
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.30 E-value=3.7e-07 Score=95.06 Aligned_cols=105 Identities=12% Similarity=0.171 Sum_probs=77.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||++++..+.+
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~~~------------- 176 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASA---------------------------LGMHVIGVNTTGHPADHF------------- 176 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESSCCCCTTC-------------
T ss_pred CCeEEEECcCHHHHHHHHHHHh---------------------------CCCEEEEECCCcchhHhH-------------
Confidence 3689999999999999999998 799999999975432111
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.......++++.+++||+|++++|......+ .. -+.....++++.++|+.|+.++-..+
T Consensus 177 --------~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~ 235 (324)
T 3evt_A 177 --------HETVAFTATADALATANFIVNALPLTPTTHH-----LF--------STELFQQTKQQPMLINIGRGPAVDTT 235 (324)
T ss_dssp --------SEEEEGGGCHHHHHHCSEEEECCCCCGGGTT-----CB--------SHHHHHTCCSCCEEEECSCGGGBCHH
T ss_pred --------hhccccCCHHHHHhhCCEEEEcCCCchHHHH-----hc--------CHHHHhcCCCCCEEEEcCCChhhhHH
Confidence 1122335678899999999999874322111 11 13456778999999999999888877
Q ss_pred HHHHHH
Q psy11160 165 SIMNVL 170 (598)
Q Consensus 165 ~~~~~l 170 (598)
.+...|
T Consensus 236 aL~~aL 241 (324)
T 3evt_A 236 ALMTAL 241 (324)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776633
No 150
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.29 E-value=1.3e-06 Score=90.20 Aligned_cols=103 Identities=16% Similarity=0.247 Sum_probs=74.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||+++++ +...+-
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~-~~~~~~---------- 183 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANA---------------------------LGMNILLYDPYPNE-ERAKEV---------- 183 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCH-HHHHHT----------
T ss_pred CceEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEECCCCCh-hhHhhc----------
Confidence 3689999999999999999998 79999999998766 322211
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
+... .++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..+
T Consensus 184 ---------g~~~-~~l~ell~~aDvV~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 184 ---------NGKF-VDLETLLKESDVVTIHVPLVESTYH-----LIN--------EERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp ---------TCEE-CCHHHHHHHCSEEEECCCCSTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ---------Cccc-cCHHHHHhhCCEEEEecCCChHHhh-----hcC--------HHHHhcCCCCeEEEECCCCcccCHH
Confidence 1222 3677889999999999875432111 111 3455678999999999997765555
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 241 aL~~ 244 (307)
T 1wwk_A 241 ALVK 244 (307)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 151
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.28 E-value=9.6e-07 Score=92.70 Aligned_cols=102 Identities=8% Similarity=0.130 Sum_probs=76.3
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
++|+|||+|.+|..+|..+.. .|.+|++||+++...+... +
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~~~~-g----------- 214 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARG---------------------------FGLAIHYHNRTRLSHALEE-G----------- 214 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHT---------------------------TTCEEEEECSSCCCHHHHT-T-----------
T ss_pred CEEEEEEeChhHHHHHHHHHH---------------------------CCCEEEEECCCCcchhhhc-C-----------
Confidence 689999999999999999988 7999999999753332211 1
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
.....++++.+++||+|++++|......+ .. -+...+.++++.++|+.|..++-..+.
T Consensus 215 ---------~~~~~~l~ell~~sDvV~l~~Plt~~T~~-----li--------~~~~l~~mk~gailIN~aRG~~vde~a 272 (345)
T 4g2n_A 215 ---------AIYHDTLDSLLGASDIFLIAAPGRPELKG-----FL--------DHDRIAKIPEGAVVINISRGDLINDDA 272 (345)
T ss_dssp ---------CEECSSHHHHHHTCSEEEECSCCCGGGTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred ---------CeEeCCHHHHHhhCCEEEEecCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHHH
Confidence 24456888899999999999985322111 11 134567789999999999988777666
Q ss_pred HHH
Q psy11160 166 IMN 168 (598)
Q Consensus 166 ~~~ 168 (598)
+..
T Consensus 273 L~~ 275 (345)
T 4g2n_A 273 LIE 275 (345)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 152
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.28 E-value=1.2e-06 Score=91.57 Aligned_cols=103 Identities=9% Similarity=0.015 Sum_probs=75.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||+++.+......|
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~g---------- 207 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQS---------------------------FGMKTIGYDPIISPEVSASFG---------- 207 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECSSSCHHHHHHTT----------
T ss_pred cCEEEEEeECHHHHHHHHHHHH---------------------------CCCEEEEECCCcchhhhhhcC----------
Confidence 3689999999999999999988 789999999986553211112
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
... .++++++++||+|++++|......+ ..+ +.+.+.++++.++|+.|+..+-..+
T Consensus 208 ----------~~~-~~l~ell~~aDvV~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~vvd~~ 263 (335)
T 2g76_A 208 ----------VQQ-LPLEEIWPLCDFITVHTPLLPSTTG-----LLN--------DNTFAQCKKGVRVVNCARGGIVDEG 263 (335)
T ss_dssp ----------CEE-CCHHHHGGGCSEEEECCCCCTTTTT-----SBC--------HHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred ----------cee-CCHHHHHhcCCEEEEecCCCHHHHH-----hhC--------HHHHhhCCCCcEEEECCCccccCHH
Confidence 222 3678889999999999876532211 111 3566788999999999998776655
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 264 aL~~ 267 (335)
T 2g76_A 264 ALLR 267 (335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 153
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.27 E-value=9e-07 Score=91.63 Aligned_cols=97 Identities=10% Similarity=0.134 Sum_probs=73.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++|+|||+|.||..++..|++. .|+ +|.+||+++++.+.+.+...
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~--------------------------~g~~~V~v~dr~~~~~~~l~~~~~------- 181 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQ--------------------------FSFKEVRIWNRTKENAEKFADTVQ------- 181 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--------------------------CCCSEEEEECSSHHHHHHHHHHSS-------
T ss_pred CcEEEEECCcHHHHHHHHHHHHh--------------------------CCCcEEEEEcCCHHHHHHHHHHhh-------
Confidence 47899999999999999999871 265 99999999999988764210
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
..+..+.++++++++||+||+|+|... +- +. . +.++++++|+..||..|..
T Consensus 182 ---------~~~~~~~~~~e~v~~aDiVi~atp~~~----------~v---~~----~--~~l~~g~~vi~~g~~~p~~ 232 (312)
T 2i99_A 182 ---------GEVRVCSSVQEAVAGADVIITVTLATE----------PI---LF----G--EWVKPGAHINAVGASRPDW 232 (312)
T ss_dssp ---------SCCEECSSHHHHHTTCSEEEECCCCSS----------CC---BC----G--GGSCTTCEEEECCCCSTTC
T ss_pred ---------CCeEEeCCHHHHHhcCCEEEEEeCCCC----------cc---cC----H--HHcCCCcEEEeCCCCCCCc
Confidence 024567788889999999999986421 00 10 1 4678999999998888865
No 154
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.27 E-value=2.6e-06 Score=87.47 Aligned_cols=126 Identities=19% Similarity=0.216 Sum_probs=81.6
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
|||+|||+|.||.++|..|+.+ +.--++.++|+++++.+-... ++.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-------------------------~~~~el~L~Di~~~~~~G~a~--------DL~h 47 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-------------------------LDVDEIALVDIAEDLAVGEAM--------DLAH 47 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-------------------------SCCSEEEEECSSHHHHHHHHH--------HHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-------------------------CCCCEEEEEeCCCCcchhhhh--------hhhc
Confidence 6999999999999999999871 122489999999877653211 0111
Q ss_pred HHhhh-cCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 86 VVKKT-RDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 86 ~~~~~-~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
..... ....+..++|++ ++++||+|||+...|.++..++.+ -..+.+.+++..+.|.++.++..++|+ |-|..+.
T Consensus 48 ~~~~~~~~~~i~~~~d~~-~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvv--sNPvd~~ 124 (294)
T 2x0j_A 48 AAAGIDKYPKIVGGADYS-LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV--TNPMDVM 124 (294)
T ss_dssp HHGGGTCCCEEEEESCGG-GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC--SSSHHHH
T ss_pred ccccCCCCCeEecCCCHH-HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEe--cCcchhh
Confidence 00000 113456677885 799999999999988877543221 122455667777778777665555554 5566655
Q ss_pred HHHH
Q psy11160 164 ESIM 167 (598)
Q Consensus 164 ~~~~ 167 (598)
-.++
T Consensus 125 t~i~ 128 (294)
T 2x0j_A 125 TYIM 128 (294)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4444
No 155
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.24 E-value=9.9e-07 Score=97.89 Aligned_cols=102 Identities=13% Similarity=0.141 Sum_probs=74.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..|.. .|++|++||++.........|
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~~a~~~g---------- 184 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAA---------------------------FGAYVVAYDPYVSPARAAQLG---------- 184 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECTTSCHHHHHHHT----------
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---------------------------CCCEEEEECCCCChhHHHhcC----------
Confidence 3789999999999999999998 789999999976432211112
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHH-HHHHHHcCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAA-RMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.... ++++++++||+|++|+|..... +..+ +.+.+.+++++++++.|+..+-..
T Consensus 185 ----------~~~~-~l~e~~~~aDvV~l~~P~~~~t--------------~~~i~~~~~~~~k~g~ilin~arg~iv~~ 239 (529)
T 1ygy_A 185 ----------IELL-SLDDLLARADFISVHLPKTPET--------------AGLIDKEALAKTKPGVIIVNAARGGLVDE 239 (529)
T ss_dssp ----------CEEC-CHHHHHHHCSEEEECCCCSTTT--------------TTCBCHHHHTTSCTTEEEEECSCTTSBCH
T ss_pred ----------cEEc-CHHHHHhcCCEEEECCCCchHH--------------HHHhCHHHHhCCCCCCEEEECCCCchhhH
Confidence 2333 6788899999999998764221 1111 235677899999999999888776
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
+.+..
T Consensus 240 ~aL~~ 244 (529)
T 1ygy_A 240 AALAD 244 (529)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 156
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.23 E-value=1.1e-06 Score=92.93 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=76.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCce-EEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQ-VTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++|+|||+|.||..+|..+.. .|.+ |++||+++...+...+
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~---------------------------~G~~~V~~~d~~~~~~~~~~~---------- 206 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVP---------------------------FNPKELLYYDYQALPKDAEEK---------- 206 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG---------------------------GCCSEEEEECSSCCCHHHHHH----------
T ss_pred CCEEEEECcCHHHHHHHHHHHh---------------------------CCCcEEEEECCCccchhHHHh----------
Confidence 3689999999999999999988 6887 9999998654443322
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.+.....++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..
T Consensus 207 ---------~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIn~arG~~vd~ 264 (364)
T 2j6i_A 207 ---------VGARRVENIEELVAQADIVTVNAPLHAGTKG-----LIN--------KELLSKFKKGAWLVNTARGAICVA 264 (364)
T ss_dssp ---------TTEEECSSHHHHHHTCSEEEECCCCSTTTTT-----CBC--------HHHHTTSCTTEEEEECSCGGGBCH
T ss_pred ---------cCcEecCCHHHHHhcCCEEEECCCCChHHHH-----HhC--------HHHHhhCCCCCEEEECCCCchhCH
Confidence 1234445788889999999999876432211 111 345577899999999999877666
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
+.+..
T Consensus 265 ~aL~~ 269 (364)
T 2j6i_A 265 EDVAA 269 (364)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 157
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.23 E-value=1e-06 Score=93.97 Aligned_cols=105 Identities=10% Similarity=0.119 Sum_probs=75.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++...+....
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a---------------------------~G~~V~~~d~~~~~~~~~~~----------- 232 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAP---------------------------FDVHLHYTDRHRLPESVEKE----------- 232 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG---------------------------GTCEEEEECSSCCCHHHHHH-----------
T ss_pred CCEEEEEeECHHHHHHHHHHHh---------------------------CCCEEEEEcCCccchhhHhh-----------
Confidence 3689999999999999999988 68999999997543332221
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.+.....++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..+
T Consensus 233 --------~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~ 291 (393)
T 2nac_A 233 --------LNLTWHATREDMYPVCDVVTLNCPLHPETEH-----MIN--------DETLKLFKRGAYIVNTARGKLCDRD 291 (393)
T ss_dssp --------HTCEECSSHHHHGGGCSEEEECSCCCTTTTT-----CBS--------HHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred --------cCceecCCHHHHHhcCCEEEEecCCchHHHH-----Hhh--------HHHHhhCCCCCEEEECCCchHhhHH
Confidence 0133445788889999999999875322111 111 3456778999999999998776655
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 292 aL~~ 295 (393)
T 2nac_A 292 AVAR 295 (393)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 158
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.22 E-value=1.1e-06 Score=91.84 Aligned_cols=104 Identities=8% Similarity=0.104 Sum_probs=75.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++...+....
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~----------- 186 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQG---------------------------WGATLQYHEAKALDTQTEQR----------- 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTT---------------------------SCCEEEEECSSCCCHHHHHH-----------
T ss_pred CCEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEECCCCCcHhHHHh-----------
Confidence 3689999999999999999887 78999999998633322211
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.+... .++++++++||+|++++|......+ .. -+...+.++++.++|+.|+..+-..+
T Consensus 187 --------~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~arg~~vd~~ 244 (330)
T 4e5n_A 187 --------LGLRQ-VACSELFASSDFILLALPLNADTLH-----LV--------NAELLALVRPGALLVNPCRGSVVDEA 244 (330)
T ss_dssp --------HTEEE-CCHHHHHHHCSEEEECCCCSTTTTT-----CB--------CHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred --------cCcee-CCHHHHHhhCCEEEEcCCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHH
Confidence 01333 3688899999999999985332211 11 13567788999999999998877766
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 245 aL~~ 248 (330)
T 4e5n_A 245 AVLA 248 (330)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 159
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.22 E-value=3.1e-07 Score=95.28 Aligned_cols=104 Identities=9% Similarity=0.145 Sum_probs=75.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||++++..+. +
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~~------------~- 178 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQA---------------------------WGFPLRCWSRSRKSWPG------------V- 178 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEEESSCCCCTT------------C-
T ss_pred CCEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEEcCCchhhhh------------h-
Confidence 4789999999999999999988 79999999997543210 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.......++++.+++||+|++++|......+ .. -+...+.++++.++|+.|+.++-..+
T Consensus 179 --------~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~ 237 (315)
T 3pp8_A 179 --------ESYVGREELRAFLNQTRVLINLLPNTAQTVG-----II--------NSELLDQLPDGAYVLNLARGVHVQEA 237 (315)
T ss_dssp --------EEEESHHHHHHHHHTCSEEEECCCCCGGGTT-----CB--------SHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred --------hhhcccCCHHHHHhhCCEEEEecCCchhhhh-----hc--------cHHHHhhCCCCCEEEECCCChhhhHH
Confidence 0011124678889999999999874322111 11 13456778999999999998887776
Q ss_pred HHHHH
Q psy11160 165 SIMNV 169 (598)
Q Consensus 165 ~~~~~ 169 (598)
.+...
T Consensus 238 aL~~a 242 (315)
T 3pp8_A 238 DLLAA 242 (315)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 160
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.22 E-value=3e-06 Score=89.57 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=76.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|..+|..+.. .|.+|++||++.........|
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~---------------------------fG~~V~~~d~~~~~~~~~~~g---------- 218 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSG---------------------------FRARIRVFDPWLPRSMLEENG---------- 218 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTT---------------------------SCCEEEEECSSSCHHHHHHTT----------
T ss_pred CCEEEEecCCcccHHHHHhhhh---------------------------CCCEEEEECCCCCHHHHhhcC----------
Confidence 3689999999999999999877 789999999975332222222
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.. ..++++.+++||+|++++|...... .+. -+...+.++++.++|+.|+.++-..+
T Consensus 219 ----------~~-~~~l~ell~~aDvV~l~~Plt~~T~-----------~li--~~~~l~~mk~gailIN~aRG~~vde~ 274 (365)
T 4hy3_A 219 ----------VE-PASLEDVLTKSDFIFVVAAVTSENK-----------RFL--GAEAFSSMRRGAAFILLSRADVVDFD 274 (365)
T ss_dssp ----------CE-ECCHHHHHHSCSEEEECSCSSCC--------------CC--CHHHHHTSCTTCEEEECSCGGGSCHH
T ss_pred ----------ee-eCCHHHHHhcCCEEEEcCcCCHHHH-----------hhc--CHHHHhcCCCCcEEEECcCCchhCHH
Confidence 22 2478889999999999987543211 111 14566789999999999999887776
Q ss_pred HHHHHH
Q psy11160 165 SIMNVL 170 (598)
Q Consensus 165 ~~~~~l 170 (598)
.+...|
T Consensus 275 aL~~aL 280 (365)
T 4hy3_A 275 ALMAAV 280 (365)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666533
No 161
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.20 E-value=4.4e-07 Score=94.46 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=75.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||+++...+.+
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~dr~~~~~~~~------------- 179 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKH---------------------------FGMKVLGVSRSGRERAGF------------- 179 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCCCTTC-------------
T ss_pred cceEEEEEECHHHHHHHHHHHh---------------------------CCCEEEEEcCChHHhhhh-------------
Confidence 3689999999999999999998 799999999975221100
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.......++++++++||+|++++|......+ ..+ +.....++++.++|+.|+..+-..+
T Consensus 180 --------~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~ 238 (324)
T 3hg7_A 180 --------DQVYQLPALNKMLAQADVIVSVLPATRETHH-----LFT--------ASRFEHCKPGAILFNVGRGNAINEG 238 (324)
T ss_dssp --------SEEECGGGHHHHHHTCSEEEECCCCCSSSTT-----SBC--------TTTTTCSCTTCEEEECSCGGGBCHH
T ss_pred --------hcccccCCHHHHHhhCCEEEEeCCCCHHHHH-----HhH--------HHHHhcCCCCcEEEECCCchhhCHH
Confidence 1112235788899999999999985332211 111 2334568899999999999887777
Q ss_pred HHHHHH
Q psy11160 165 SIMNVL 170 (598)
Q Consensus 165 ~~~~~l 170 (598)
.+...|
T Consensus 239 aL~~aL 244 (324)
T 3hg7_A 239 DLLTAL 244 (324)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766633
No 162
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.19 E-value=2.2e-06 Score=89.84 Aligned_cols=103 Identities=11% Similarity=0.180 Sum_probs=76.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|.+|++||+++.. ...
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~--~~~------------ 186 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSA---------------------------MGAKVIAYDVAYNP--EFE------------ 186 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCG--GGT------------
T ss_pred CCeEEEEecCHHHHHHHHHHhh---------------------------CCCEEEEECCChhh--hhh------------
Confidence 3689999999999999999998 79999999998643 111
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
...... ++++++++||+|++++|......+ ..+ +.....++++.++|+.|+..+-..+
T Consensus 187 --------~~~~~~-~l~ell~~aDvV~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRg~~vd~~ 244 (343)
T 2yq5_A 187 --------PFLTYT-DFDTVLKEADIVSLHTPLFPSTEN-----MIG--------EKQLKEMKKSAYLINCARGELVDTG 244 (343)
T ss_dssp --------TTCEEC-CHHHHHHHCSEEEECCCCCTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred --------cccccc-CHHHHHhcCCEEEEcCCCCHHHHH-----Hhh--------HHHHhhCCCCcEEEECCCChhhhHH
Confidence 112233 788899999999999985332211 111 3456778999999999999887777
Q ss_pred HHHHHH
Q psy11160 165 SIMNVL 170 (598)
Q Consensus 165 ~~~~~l 170 (598)
.+...|
T Consensus 245 aL~~aL 250 (343)
T 2yq5_A 245 ALIKAL 250 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776643
No 163
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.17 E-value=8e-07 Score=91.74 Aligned_cols=100 Identities=13% Similarity=0.234 Sum_probs=73.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||++++ +. +.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~---------------------------~G~~V~~~dr~~~--~~---~~--------- 162 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAA---------------------------LGAQVRGFSRTPK--EG---PW--------- 162 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHH---------------------------TTCEEEEECSSCC--CS---SS---------
T ss_pred CCEEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEECCCcc--cc---Cc---------
Confidence 3689999999999999999998 7999999999764 11 10
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
....++++.+++||+|++++|......+ +. -+.+.+.++++.++|+.|+..+-..+
T Consensus 163 -----------~~~~~l~ell~~aDvV~l~~P~~~~t~~-----------~i--~~~~l~~mk~gailin~srg~~vd~~ 218 (303)
T 1qp8_A 163 -----------RFTNSLEEALREARAAVCALPLNKHTRG-----------LV--KYQHLALMAEDAVFVNVGRAEVLDRD 218 (303)
T ss_dssp -----------CCBSCSHHHHTTCSEEEECCCCSTTTTT-----------CB--CHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred -----------ccCCCHHHHHhhCCEEEEeCcCchHHHH-----------Hh--CHHHHhhCCCCCEEEECCCCcccCHH
Confidence 1124567789999999999876432211 11 13566789999999999998776666
Q ss_pred HHHHH
Q psy11160 165 SIMNV 169 (598)
Q Consensus 165 ~~~~~ 169 (598)
.+...
T Consensus 219 aL~~a 223 (303)
T 1qp8_A 219 GVLRI 223 (303)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 164
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.16 E-value=2.2e-06 Score=89.57 Aligned_cols=101 Identities=11% Similarity=0.174 Sum_probs=74.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
++|+|||+|.||..+|..+.. .|++|++||+++++. +.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~~--~~~~----------- 186 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEG---------------------------FGAKVITYDIFRNPE--LEKK----------- 186 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCHH--HHHT-----------
T ss_pred CEEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEECCCcchh--HHhh-----------
Confidence 689999999999999999998 789999999987654 2221
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
.....++++.+++||+|++++|...... .+. -+...+.++++.++|+.|+..+-..+.
T Consensus 187 ---------~~~~~~l~ell~~aDvV~l~~p~~~~t~-----------~li--~~~~l~~mk~ga~lIn~arg~~vd~~a 244 (333)
T 1j4a_A 187 ---------GYYVDSLDDLYKQADVISLHVPDVPANV-----------HMI--NDESIAKMKQDVVIVNVSRGPLVDTDA 244 (333)
T ss_dssp ---------TCBCSCHHHHHHHCSEEEECSCCCGGGT-----------TCB--SHHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred ---------CeecCCHHHHHhhCCEEEEcCCCcHHHH-----------HHH--hHHHHhhCCCCcEEEECCCCcccCHHH
Confidence 0122367788999999999987543211 110 034556789999999999987766666
Q ss_pred HHH
Q psy11160 166 IMN 168 (598)
Q Consensus 166 ~~~ 168 (598)
+..
T Consensus 245 L~~ 247 (333)
T 1j4a_A 245 VIR 247 (333)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 165
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.15 E-value=3.2e-06 Score=87.21 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=71.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.||..+|..++. .|+ +|+++|++++......
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~---------------------------~g~~~ev~L~Di~~~~~g~a~---------- 56 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA---------------------------KGIADRLVLLDLSEGTKGATM---------- 56 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------HTCCSEEEEECCC-----CHH----------
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------cCCCCEEEEEcCCcchHHHHH----------
Confidence 5799999999999999999998 566 9999999985211110
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
++.. ....+++.++|+ +++++||+||++++.+ .+..++.+ ...+...++++++.|.++. ++.++++ -|-|..
T Consensus 57 --dl~~-~~~~~i~~t~d~-~~l~~aD~Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~sNP~~ 129 (303)
T 2i6t_A 57 --DLEI-FNLPNVEISKDL-SASAHSKVVIFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV-ASQPVE 129 (303)
T ss_dssp --HHHH-HTCTTEEEESCG-GGGTTCSEEEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE-CSSSHH
T ss_pred --HHhh-hcCCCeEEeCCH-HHHCCCCEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-cCChHH
Confidence 1111 111357788898 6899999999998665 22111000 1223445677778888877 5665544 233554
Q ss_pred HH
Q psy11160 162 AA 163 (598)
Q Consensus 162 ~~ 163 (598)
..
T Consensus 130 ~~ 131 (303)
T 2i6t_A 130 IM 131 (303)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 166
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.15 E-value=4.6e-06 Score=72.13 Aligned_cols=74 Identities=18% Similarity=0.246 Sum_probs=54.1
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-ceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-IQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++++|+|+|+|++|..++..|.. .| ++|+++|+++++.+.+.........
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~---------------------------~g~~~v~~~~r~~~~~~~~~~~~~~~~~-- 54 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT---------------------------SSNYSVTVADHDLAALAVLNRMGVATKQ-- 54 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH---------------------------CSSEEEEEEESCHHHHHHHHTTTCEEEE--
T ss_pred CcCeEEEECCCHHHHHHHHHHHh---------------------------CCCceEEEEeCCHHHHHHHHhCCCcEEE--
Confidence 45799999999999999999999 78 9999999999999887732111100
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
..+.-..+..++++++|+||.++|
T Consensus 55 ----------~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 55 ----------VDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp ----------CCTTCHHHHHHHTTTCSEEEECSC
T ss_pred ----------ecCCCHHHHHHHHcCCCEEEECCC
Confidence 001111234456789999999975
No 167
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.15 E-value=1.7e-06 Score=92.82 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=74.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++... .
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~----~----------- 182 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAES---------------------------LGMYVYFYDIENKLP----L----------- 182 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCCC----C-----------
T ss_pred CCEEEEEeECHHHHHHHHHHHH---------------------------CCCEEEEEcCCchhc----c-----------
Confidence 3689999999999999999988 799999999864210 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
++.....++++.+++||+|++++|......+ ..+ +.....++++.++|+.|+..+-..+
T Consensus 183 --------~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIN~aRg~~vd~~ 241 (404)
T 1sc6_A 183 --------GNATQVQHLSDLLNMSDVVSLHVPENPSTKN-----MMG--------AKEISLMKPGSLLINASRGTVVDIP 241 (404)
T ss_dssp --------TTCEECSCHHHHHHHCSEEEECCCSSTTTTT-----CBC--------HHHHHHSCTTEEEEECSCSSSBCHH
T ss_pred --------CCceecCCHHHHHhcCCEEEEccCCChHHHH-----Hhh--------HHHHhhcCCCeEEEECCCChHHhHH
Confidence 1234456788899999999999876432211 111 3455678999999999998876666
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 242 aL~~ 245 (404)
T 1sc6_A 242 ALAD 245 (404)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 168
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.13 E-value=2.3e-06 Score=91.79 Aligned_cols=100 Identities=10% Similarity=0.146 Sum_probs=73.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
++|+|||+|.||..+|..+.. .|++|++||+++.. +.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~yd~~~~~---------~~------- 193 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAES---------------------------LGMTVRYYDTSDKL---------QY------- 193 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECTTCCC---------CB-------
T ss_pred CEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEECCcchh---------cc-------
Confidence 689999999999999999988 79999999986210 00
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
.......++++.+++||+|++++|......+ .. -+.....++++.++|+.|+..+-..+.
T Consensus 194 -------~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~-----li--------~~~~l~~mk~gailIN~aRG~vvd~~a 253 (416)
T 3k5p_A 194 -------GNVKPAASLDELLKTSDVVSLHVPSSKSTSK-----LI--------TEAKLRKMKKGAFLINNARGSDVDLEA 253 (416)
T ss_dssp -------TTBEECSSHHHHHHHCSEEEECCCC-----C-----CB--------CHHHHHHSCTTEEEEECSCTTSBCHHH
T ss_pred -------cCcEecCCHHHHHhhCCEEEEeCCCCHHHhh-----hc--------CHHHHhhCCCCcEEEECCCChhhhHHH
Confidence 1234457888999999999999976432111 11 134567789999999999998877766
Q ss_pred HHH
Q psy11160 166 IMN 168 (598)
Q Consensus 166 ~~~ 168 (598)
+..
T Consensus 254 L~~ 256 (416)
T 3k5p_A 254 LAK 256 (416)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 169
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.13 E-value=2.6e-06 Score=87.81 Aligned_cols=93 Identities=20% Similarity=0.257 Sum_probs=62.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.|||+|||+|.||+.+|..|+. |++|++|++++++++.+++....+..++..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~~----------------------------g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~ 53 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLSL----------------------------YHDVTVVTRRQEQAAAIQSEGIRLYKGGEE 53 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT----------------------------TSEEEEECSCHHHHHHHHHHCEEEEETTEE
T ss_pred CCEEEEECCCHHHHHHHHHHhc----------------------------CCceEEEECCHHHHHHHHhCCceEecCCCe
Confidence 4799999999999999999884 789999999999988887532222111110
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNK 150 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 150 (598)
.......+ .++...+|+||+||+.. .+.++++.+.+. .+++
T Consensus 54 ------~~~~~~~~---~~~~~~~D~vilavK~~---------------~~~~~l~~l~~~-~~~~ 94 (307)
T 3ego_A 54 ------FRADCSAD---TSINSDFDLLVVTVKQH---------------QLQSVFSSLERI-GKTN 94 (307)
T ss_dssp ------EEECCEEE---SSCCSCCSEEEECCCGG---------------GHHHHHHHTTSS-CCCE
T ss_pred ------eccccccc---ccccCCCCEEEEEeCHH---------------HHHHHHHHhhcC-CCCe
Confidence 00111221 12467899999998643 256677777654 4555
No 170
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.13 E-value=1.7e-05 Score=71.52 Aligned_cols=42 Identities=24% Similarity=0.243 Sum_probs=39.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
+++|.|+|+|.+|..+|..|++ .|++|+++|+++++++.+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~---------------------------~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA---------------------------AGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEECCHHHHHHHHH
Confidence 5689999999999999999999 89999999999999998875
No 171
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.12 E-value=1.1e-05 Score=74.22 Aligned_cols=41 Identities=27% Similarity=0.355 Sum_probs=37.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
.++|.|+|+|.+|..+|..|.. .|++|+++|+++++++.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~---------------------------~g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASS---------------------------SGHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESCGGGGGGSC
T ss_pred CCcEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEEECCHHHHHHHH
Confidence 4789999999999999999999 8999999999999887654
No 172
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.12 E-value=1.6e-05 Score=82.88 Aligned_cols=73 Identities=19% Similarity=0.225 Sum_probs=58.0
Q ss_pred CCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
.+++||+|||+|.||..++..|... .+++|+ ++|+++++.+.+.+..
T Consensus 2 ~~~~rvgiiG~G~~g~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~a~~~------ 49 (344)
T 3euw_A 2 SLTLRIALFGAGRIGHVHAANIAAN--------------------------PDLELVVIADPFIEGAQRLAEAN------ 49 (344)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHC--------------------------TTEEEEEEECSSHHHHHHHHHTT------
T ss_pred CCceEEEEECCcHHHHHHHHHHHhC--------------------------CCcEEEEEECCCHHHHHHHHHHc------
Confidence 3457999999999999999999871 467876 7899999988876421
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+....+|+++.++ ++|+|++|+|+..
T Consensus 50 ------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 77 (344)
T 3euw_A 50 ------------GAEAVASPDEVFARDDIDGIVIGSPTST 77 (344)
T ss_dssp ------------TCEEESSHHHHTTCSCCCEEEECSCGGG
T ss_pred ------------CCceeCCHHHHhcCCCCCEEEEeCCchh
Confidence 2456789998888 8999999987653
No 173
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.10 E-value=2.6e-05 Score=70.64 Aligned_cols=73 Identities=15% Similarity=0.319 Sum_probs=53.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCC-C-CCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPI-Y-EPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~-~-e~~ 82 (598)
..+|.|+|+|.+|..+|..|.. .|++|+++|+++++++.+.+...+. . +..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~---------------------------~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~ 59 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA---------------------------SDIPLVVIETSRTRVDELRERGVRAVLGNAA 59 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEESCHHHHHHHHHTTCEEEESCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHH---------------------------CCCCEEEEECCHHHHHHHHHcCCCEEECCCC
Confidence 4689999999999999999999 8999999999999999887522211 1 111
Q ss_pred hHHHHhhhcCCceEEecCHHH-HhccCcEEEEecCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKS-AIQKAQLIFISVNTP 118 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~~adviii~v~tp 118 (598)
-++. +.+ .+.++|++|+++|.+
T Consensus 60 ~~~~--------------l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 60 NEEI--------------MQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp SHHH--------------HHHTTGGGCSEEEECCSCH
T ss_pred CHHH--------------HHhcCcccCCEEEEECCCh
Confidence 1111 111 257899999997653
No 174
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.10 E-value=2.9e-06 Score=77.21 Aligned_cols=71 Identities=18% Similarity=0.374 Sum_probs=57.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..++..|+. .|++|+++|+++++.+.+.+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~---------------------------~g~~v~v~~r~~~~~~~~a~~~--------- 64 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY---------------------------PQYKVTVAGRNIDHVRAFAEKY--------- 64 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT---------------------------TTCEEEEEESCHHHHHHHHHHH---------
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEcCCHHHHHHHHHHh---------
Confidence 4689999999999999998888 7888999999999988765320
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
........+..++++++|+||.|+|.+
T Consensus 65 -------~~~~~~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 65 -------EYEYVLINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp -------TCEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred -------CCceEeecCHHHHhcCCCEEEEeCCCC
Confidence 012345567888899999999998765
No 175
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.07 E-value=2.8e-06 Score=88.76 Aligned_cols=100 Identities=9% Similarity=0.148 Sum_probs=73.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
++|+|||+|.||..+|..+.. .|++|++||+++... + ..
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~~--~-~~----------- 184 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKG---------------------------FGAKVIAYDPYPMKG--D-HP----------- 184 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCSS--C-CT-----------
T ss_pred CEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEECCCcchh--h-Hh-----------
Confidence 689999999999999999998 799999999975321 0 00
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
.... .++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..+.
T Consensus 185 --------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~srg~~vd~~a 242 (333)
T 1dxy_A 185 --------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTH-----IIN--------EAAFNLMKPGAIVINTARPNLIDTQA 242 (333)
T ss_dssp --------TCEE-CCHHHHHHHCSEEEECCCCCGGGTT-----SBC--------HHHHHHSCTTEEEEECSCTTSBCHHH
T ss_pred --------cccc-CCHHHHHhcCCEEEEcCCCchhHHH-----HhC--------HHHHhhCCCCcEEEECCCCcccCHHH
Confidence 0122 3678889999999999876432211 111 34567789999999999988777666
Q ss_pred HHH
Q psy11160 166 IMN 168 (598)
Q Consensus 166 ~~~ 168 (598)
+..
T Consensus 243 L~~ 245 (333)
T 1dxy_A 243 MLS 245 (333)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 176
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.06 E-value=4.3e-06 Score=88.69 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=75.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||++.+... .+
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a---------------------------~G~~V~~~d~~~~~~~---~~---------- 158 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEA---------------------------LGIRTLLCDPPRAARG---DE---------- 158 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECHHHHHTT---CC----------
T ss_pred CCEEEEEeECHHHHHHHHHHHH---------------------------CCCEEEEECCChHHhc---cC----------
Confidence 3689999999999999999998 7999999997543211 00
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCC----CCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTK----TFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
. ...++++++++||+|++++|.... ..+ ..+ +.....++++.++|+.|+.++
T Consensus 159 ----------~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~-----li~--------~~~l~~mk~gailIN~aRG~v 214 (381)
T 3oet_A 159 ----------G-DFRTLDELVQEADVLTFHTPLYKDGPYKTLH-----LAD--------ETLIRRLKPGAILINACRGPV 214 (381)
T ss_dssp ----------S-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTT-----SBC--------HHHHHHSCTTEEEEECSCGGG
T ss_pred ----------c-ccCCHHHHHhhCCEEEEcCcCCccccccchh-----hcC--------HHHHhcCCCCcEEEECCCCcc
Confidence 0 124678899999999999875422 111 111 345677899999999999988
Q ss_pred HHHHHHHHHH
Q psy11160 161 RAAESIMNVL 170 (598)
Q Consensus 161 ~~~~~~~~~l 170 (598)
-..+.+...|
T Consensus 215 vde~aL~~aL 224 (381)
T 3oet_A 215 VDNAALLARL 224 (381)
T ss_dssp BCHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 7777776533
No 177
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.05 E-value=4.9e-06 Score=84.43 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=70.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..|++ .|++|+++|+++++.+.+.+..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~---------------------------~g~~V~v~~r~~~~~~~l~~~~--------- 172 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVK---------------------------EGAKVFLWNRTKEKAIKLAQKF--------- 172 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH---------------------------HTCEEEEECSSHHHHHHHTTTS---------
T ss_pred CCEEEEECchHHHHHHHHHHHH---------------------------cCCEEEEEECCHHHHHHHHHHc---------
Confidence 3689999999999999999999 6789999999999988876421
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
+....+++.++++++|+||.|+|.+..++. .. .+ . .+.++++++|++.++
T Consensus 173 ---------g~~~~~~~~~~~~~aDiVi~atp~~~~~~~------~~--~i----~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 173 ---------PLEVVNSPEEVIDKVQVIVNTTSVGLKDED------PE--IF----N--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp ---------CEEECSCGGGTGGGCSEEEECSSTTSSTTC------CC--SS----C--GGGCCTTSEEEESSS
T ss_pred ---------CCeeehhHHhhhcCCCEEEEeCCCCCCCCC------CC--CC----C--HHHcCCCCEEEEcCC
Confidence 234445677788999999999887642110 00 01 0 245678999998887
No 178
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.04 E-value=7.5e-06 Score=80.98 Aligned_cols=85 Identities=12% Similarity=0.145 Sum_probs=63.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||+|||+|.||..++..|.+ .|++| .+||+++ +.+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~---------------------------~g~~lv~v~d~~~-~~~--------------- 37 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER---------------------------NGFEIAAILDVRG-EHE--------------- 37 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEECSSC-CCT---------------
T ss_pred CEEEEECCCHHHHHHHHHHhc---------------------------CCCEEEEEEecCc-chh---------------
Confidence 589999999999999999988 88997 6899873 110
Q ss_pred HHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
. ..+|+++.+ .++|+|++|+|... .. +.+...+..|+.|+.+||..+..
T Consensus 38 ---------~--~~~~~~~l~~~~~DvVv~~~~~~~---------------~~---~~~~~~l~~G~~vv~~~~~~~~~ 87 (236)
T 2dc1_A 38 ---------K--MVRGIDEFLQREMDVAVEAASQQA---------------VK---DYAEKILKAGIDLIVLSTGAFAD 87 (236)
T ss_dssp ---------T--EESSHHHHTTSCCSEEEECSCHHH---------------HH---HHHHHHHHTTCEEEESCGGGGGS
T ss_pred ---------h--hcCCHHHHhcCCCCEEEECCCHHH---------------HH---HHHHHHHHCCCcEEEECcccCCh
Confidence 0 456788777 68999999976431 12 22334566889999999876543
No 179
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.03 E-value=1.2e-05 Score=84.10 Aligned_cols=73 Identities=7% Similarity=0.151 Sum_probs=57.1
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+++||+|||+|.||..++..|.+ ...+++++ ++|+++++.+.+.+.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~-------------------------~~~~~~lvav~d~~~~~~~~~~~~-------- 58 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEK-------------------------HADRAELIDVCDIDPAALKAAVER-------- 58 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHH-------------------------TTTTEEEEEEECSSHHHHHHHHHH--------
T ss_pred CcceEEEEcCcHHHHHHHHHHHh-------------------------CCCCeEEEEEEcCCHHHHHHHHHH--------
Confidence 35799999999999999999988 11367765 889999998877642
Q ss_pred hHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
-++...+|+++.++ ++|+|+||+|+..
T Consensus 59 ----------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 87 (354)
T 3q2i_A 59 ----------TGARGHASLTDMLAQTDADIVILTTPSGL 87 (354)
T ss_dssp ----------HCCEEESCHHHHHHHCCCSEEEECSCGGG
T ss_pred ----------cCCceeCCHHHHhcCCCCCEEEECCCcHH
Confidence 12467789998887 7899999987653
No 180
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.03 E-value=2.4e-05 Score=73.83 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=38.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-CceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~~~~~~~~~~ 73 (598)
.++|.|+|+|.||..+|..|.+ . |++|+++|+++++++.+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~---------------------------~~g~~V~vid~~~~~~~~~~~ 81 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA---------------------------RYGKISLGIEIREEAAQQHRS 81 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH---------------------------HHCSCEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHh---------------------------ccCCeEEEEECCHHHHHHHHH
Confidence 3589999999999999999999 8 9999999999999988774
No 181
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.02 E-value=6.9e-06 Score=87.18 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=74.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..+.. .|++|++||++.+.. ..+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~---------------------------~G~~V~~~d~~~~~~---~~g---------- 155 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRG---------------------------LGWKVLVCDPPRQAR---EPD---------- 155 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECHHHHHH---STT----------
T ss_pred CCEEEEEeCCHHHHHHHHHHHH---------------------------CCCEEEEEcCChhhh---ccC----------
Confidence 3689999999999999999998 799999999866432 111
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.. ..++++.+++||+|++++|.... + +. + ...+. -+.+.+.++++.++|+.|+..+-..+
T Consensus 156 ----------~~-~~~l~ell~~aDvV~l~~Plt~~--g--~~--~-T~~li--~~~~l~~mk~gailIN~sRG~vvd~~ 215 (380)
T 2o4c_A 156 ----------GE-FVSLERLLAEADVISLHTPLNRD--G--EH--P-TRHLL--DEPRLAALRPGTWLVNASRGAVVDNQ 215 (380)
T ss_dssp ----------SC-CCCHHHHHHHCSEEEECCCCCSS--S--SS--C-CTTSB--CHHHHHTSCTTEEEEECSCGGGBCHH
T ss_pred ----------cc-cCCHHHHHHhCCEEEEeccCccc--c--cc--c-hhhhc--CHHHHhhCCCCcEEEECCCCcccCHH
Confidence 01 24677889999999999875432 0 00 0 00111 13566789999999999998877766
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 216 aL~~ 219 (380)
T 2o4c_A 216 ALRR 219 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 182
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.02 E-value=6.7e-06 Score=85.82 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=73.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++++. +. .
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~~--~~-~---------- 185 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHG---------------------------MGATVIGEDVFEIKG--IE-D---------- 185 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCCS--CT-T----------
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEECCCccHH--HH-h----------
Confidence 3689999999999999999998 799999999875321 00 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
.... .++++.+++||+|++++|......+ ..+ +...+.++++.++|+.|+..+-..+
T Consensus 186 ---------~~~~-~~l~ell~~aDvV~~~~p~t~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~ 242 (331)
T 1xdw_A 186 ---------YCTQ-VSLDEVLEKSDIITIHAPYIKENGA-----VVT--------RDFLKKMKDGAILVNCARGQLVDTE 242 (331)
T ss_dssp ---------TCEE-CCHHHHHHHCSEEEECCCCCTTTCC-----SBC--------HHHHHTSCTTEEEEECSCGGGBCHH
T ss_pred ---------cccc-CCHHHHHhhCCEEEEecCCchHHHH-----HhC--------HHHHhhCCCCcEEEECCCcccccHH
Confidence 0122 3678889999999999875432211 111 3455678999999999998876666
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 243 aL~~ 246 (331)
T 1xdw_A 243 AVIE 246 (331)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 183
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.02 E-value=1.3e-05 Score=83.93 Aligned_cols=72 Identities=10% Similarity=0.216 Sum_probs=55.0
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+++||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+..
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~--------------------------~~~~lvav~d~~~~~~~~~~~~~------- 50 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS--------------------------EKLKLVTCYSRTEDKREKFGKRY------- 50 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--------------------------SSEEEEEEECSSHHHHHHHHHHH-------
T ss_pred CcceEEEEccCHHHHHHHHHHHhC--------------------------CCcEEEEEECCCHHHHHHHHHHc-------
Confidence 347999999999999999988771 477865 7899999988765310
Q ss_pred hHHHHhhhcCCceEEecCHHHHh--ccCcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAI--QKAQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~--~~adviii~v~tp~ 119 (598)
++...+|+++.+ .++|+|++|+|+..
T Consensus 51 -----------g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 78 (354)
T 3db2_A 51 -----------NCAGDATMEALLAREDVEMVIITVPNDK 78 (354)
T ss_dssp -----------TCCCCSSHHHHHHCSSCCEEEECSCTTS
T ss_pred -----------CCCCcCCHHHHhcCCCCCEEEEeCChHH
Confidence 122357888888 56899999987764
No 184
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.00 E-value=3.4e-06 Score=87.34 Aligned_cols=98 Identities=9% Similarity=0.130 Sum_probs=71.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|++|++||+++++.. +
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~---------------------------~G~~V~~~d~~~~~~~--------~------ 182 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALA---------------------------FGMRVVYHARTPKPLP--------Y------ 182 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCSSS--------S------
T ss_pred CCEEEEEEECHHHHHHHHHHHH---------------------------CCCEEEEECCCCcccc--------c------
Confidence 3689999999999999999998 7899999999754321 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAE 164 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~ 164 (598)
. ..++++.+++||+|++++|......+ . +. +...+.++++.++|+.|+..+-..+
T Consensus 183 -----------~-~~~l~ell~~aDvV~l~~p~~~~t~~-----l-----i~---~~~l~~mk~ga~lin~srg~~vd~~ 237 (311)
T 2cuk_A 183 -----------P-FLSLEELLKEADVVSLHTPLTPETHR-----L-----LN---RERLFAMKRGAILLNTARGALVDTE 237 (311)
T ss_dssp -----------C-BCCHHHHHHHCSEEEECCCCCTTTTT-----C-----BC---HHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred -----------c-cCCHHHHHhhCCEEEEeCCCChHHHh-----h-----cC---HHHHhhCCCCcEEEECCCCCccCHH
Confidence 0 24577789999999999876432111 0 10 2345678999999999997776655
Q ss_pred HHHH
Q psy11160 165 SIMN 168 (598)
Q Consensus 165 ~~~~ 168 (598)
.+..
T Consensus 238 aL~~ 241 (311)
T 2cuk_A 238 ALVE 241 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 185
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.00 E-value=8e-06 Score=84.86 Aligned_cols=75 Identities=7% Similarity=0.062 Sum_probs=56.2
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~ 79 (598)
|..+++||+|||+|.||..++..|.+. .+++|+ ++|+++++.+.+.+..
T Consensus 1 M~m~~~~igiiG~G~~g~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~~~~~---- 50 (330)
T 3e9m_A 1 MSLDKIRYGIMSTAQIVPRFVAGLRES--------------------------AQAEVRGIASRRLENAQKMAKEL---- 50 (330)
T ss_dssp --CCCEEEEECSCCTTHHHHHHHHHHS--------------------------SSEEEEEEBCSSSHHHHHHHHHT----
T ss_pred CCCCeEEEEEECchHHHHHHHHHHHhC--------------------------CCcEEEEEEeCCHHHHHHHHHHc----
Confidence 444567999999999999999999871 467776 6899999988776421
Q ss_pred CCChHHHHhhhcCCce-EEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 80 EPGLDEVVKKTRDVNL-FFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~-~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+. ...+|+++.++ ++|+|++|+|+..
T Consensus 51 --------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (330)
T 3e9m_A 51 --------------AIPVAYGSYEELCKDETIDIIYIPTYNQG 79 (330)
T ss_dssp --------------TCCCCBSSHHHHHHCTTCSEEEECCCGGG
T ss_pred --------------CCCceeCCHHHHhcCCCCCEEEEcCCCHH
Confidence 11 34578888887 7899999987653
No 186
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.00 E-value=2.8e-05 Score=80.05 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=76.2
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeC--CHHHHHHHHcCCCCCCC
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDK--SEERIRQWNSNKLPIYE 80 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~--~~~~~~~~~~~~~~~~e 80 (598)
|||+|+| +|++|.+++..|+. .|+ ++.++|+ ++++++....
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~---------------------------~~~~~el~L~Di~~~~~~~~~~~~------- 46 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL---------------------------RDIADEVVFVDIPDKEDDTVGQAA------- 46 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCCSEEEEECCGGGHHHHHHHHH-------
T ss_pred CEEEEECCCChHHHHHHHHHHh---------------------------CCCCCEEEEEcCCCChhhHHHHHH-------
Confidence 5999999 99999999999988 443 7999999 8877653210
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
.+.+... .....+.+.+..+++++||+||++.+.|..+...+.+ ...+...+++.++.+.++ .++.+|++ +|.|
T Consensus 47 -dl~~~~~--~~~~~~v~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv-~SNP 121 (303)
T 1o6z_A 47 -DTNHGIA--YDSNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLT-TSNP 121 (303)
T ss_dssp -HHHHHHT--TTCCCEEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEE-CCSS
T ss_pred -HHHHHHh--hCCCcEEEeCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE-eCCh
Confidence 1111111 0112233323356899999999999877643211000 011234555556666655 35555555 7889
Q ss_pred hHHHHHHHH
Q psy11160 160 VRAAESIMN 168 (598)
Q Consensus 160 ~~~~~~~~~ 168 (598)
.+..-.++.
T Consensus 122 v~~~~~~~~ 130 (303)
T 1o6z_A 122 VDLLNRHLY 130 (303)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888755544
No 187
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.98 E-value=1.2e-05 Score=82.44 Aligned_cols=102 Identities=15% Similarity=0.158 Sum_probs=69.0
Q ss_pred CceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.||.. ++..|.+. .+++++ ++|+++++.+.+.+..
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~a~~~------- 52 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKS--------------------------ERFEFVGAFTPNKVKREKICSDY------- 52 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSC--------------------------SSSEEEEEECSCHHHHHHHHHHH-------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhC--------------------------CCeEEEEEECCCHHHHHHHHHHc-------
Confidence 479999999999996 78777761 567777 7999999998876410
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe--cCCch
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK--STVPV 160 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~--STv~~ 160 (598)
+....+|+++.++++|+|+||+|+... .+. +...+..++-|+.+ .+..+
T Consensus 53 -----------~~~~~~~~~~ll~~~D~V~i~tp~~~h---------------~~~---~~~al~~gk~vl~EKP~~~~~ 103 (308)
T 3uuw_A 53 -----------RIMPFDSIESLAKKCDCIFLHSSTETH---------------YEI---IKILLNLGVHVYVDKPLASTV 103 (308)
T ss_dssp -----------TCCBCSCHHHHHTTCSEEEECCCGGGH---------------HHH---HHHHHHTTCEEEECSSSSSSH
T ss_pred -----------CCCCcCCHHHHHhcCCEEEEeCCcHhH---------------HHH---HHHHHHCCCcEEEcCCCCCCH
Confidence 111257888888899999999876532 111 22233455555554 45566
Q ss_pred HHHHHHHH
Q psy11160 161 RAAESIMN 168 (598)
Q Consensus 161 ~~~~~~~~ 168 (598)
..++++..
T Consensus 104 ~~~~~l~~ 111 (308)
T 3uuw_A 104 SQGEELIE 111 (308)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 188
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.97 E-value=2.9e-05 Score=80.43 Aligned_cols=70 Identities=14% Similarity=0.154 Sum_probs=55.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||..++..|... .+++|+ ++|+++++.+.+.+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~~~~--------- 47 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGN--------------------------ADARLVAVADAFPAAAEAIAGA--------- 47 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--------------------------TTEEEEEEECSSHHHHHHHHHH---------
T ss_pred ceEEEEECCCHHHHHHHHHHhhC--------------------------CCcEEEEEECCCHHHHHHHHHH---------
Confidence 47999999999999999999871 477877 699999998877642
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
.++. .+|+++.++ ++|+|++|+|+..
T Consensus 48 ---------~~~~-~~~~~~~l~~~~~D~V~i~tp~~~ 75 (331)
T 4hkt_A 48 ---------YGCE-VRTIDAIEAAADIDAVVICTPTDT 75 (331)
T ss_dssp ---------TTCE-ECCHHHHHHCTTCCEEEECSCGGG
T ss_pred ---------hCCC-cCCHHHHhcCCCCCEEEEeCCchh
Confidence 1234 678888887 7999999987653
No 189
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.95 E-value=2.7e-05 Score=81.85 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=54.4
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~ 79 (598)
|+.+..||+|||+|.||...+..|... .+++|+ ++|+++++.+...+-
T Consensus 1 M~m~~~~vgiiG~G~~g~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~a~~~----- 49 (359)
T 3e18_A 1 MSLKKYQLVIVGYGGMGSYHVTLASAA--------------------------DNLEVHGVFDILAEKREAAAQK----- 49 (359)
T ss_dssp --CCCEEEEEECCSHHHHHHHHHHHTS--------------------------TTEEEEEEECSSHHHHHHHHTT-----
T ss_pred CCCCcCcEEEECcCHHHHHHHHHHHhC--------------------------CCcEEEEEEcCCHHHHHHHHhc-----
Confidence 544457999999999999999888771 467876 579999998754321
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
++...+|+++.++ +.|+|+||+|+..
T Consensus 50 --------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 50 --------------GLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp --------------TCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred --------------CCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 1234578888887 7899999987653
No 190
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.95 E-value=3.7e-05 Score=78.88 Aligned_cols=96 Identities=14% Similarity=0.251 Sum_probs=71.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|..+|..+.. .|.+|+++|+++++.+.+.+- +
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~---------------------------~G~~V~~~d~~~~~~~~~~~~-------g-- 200 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAA---------------------------LGANVKVGARSSAHLARITEM-------G-- 200 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESSHHHHHHHHHT-------T--
T ss_pred CCEEEEEcccHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHHHC-------C--
Confidence 3689999999999999999998 789999999999887765431 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.......++++.+++||+|++++|...- + +...+.++++.++|+.+..+.++
T Consensus 201 --------~~~~~~~~l~~~l~~aDvVi~~~p~~~i----------~--------~~~~~~mk~g~~lin~a~g~~~~ 252 (300)
T 2rir_A 201 --------LVPFHTDELKEHVKDIDICINTIPSMIL----------N--------QTVLSSMTPKTLILDLASRPGGT 252 (300)
T ss_dssp --------CEEEEGGGHHHHSTTCSEEEECCSSCCB----------C--------HHHHTTSCTTCEEEECSSTTCSB
T ss_pred --------CeEEchhhHHHHhhCCCEEEECCChhhh----------C--------HHHHHhCCCCCEEEEEeCCCCCc
Confidence 0111124677788999999999875321 1 12345688999999999876654
No 191
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.95 E-value=0.0001 Score=71.55 Aligned_cols=128 Identities=12% Similarity=0.094 Sum_probs=78.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc--CCCCCC-CCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS--NKLPIY-EPG 82 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~--~~~~~~-e~~ 82 (598)
|||.|+|+|.+|..+|..|.+ .|++|+++|+++++++.+.+ +...+. +..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~---------------------------~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~ 53 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS---------------------------RKYGVVIINKDRELCEEFAKKLKATIIHGDGS 53 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH---------------------------TTCCEEEEESCHHHHHHHHHHSSSEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEEECCHHHHHHHHHHcCCeEEEcCCC
Confidence 589999999999999999999 89999999999999998763 211111 000
Q ss_pred hHHHHhhhcCCceEEecCHHHH-hccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSA-IQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
-. ..+.++ +.+||++|++++.+ .....+..+++.+.+..-++.. +-.+.
T Consensus 54 ~~--------------~~l~~a~i~~ad~vi~~~~~d---------------~~n~~~~~~a~~~~~~~~iia~-~~~~~ 103 (218)
T 3l4b_C 54 HK--------------EILRDAEVSKNDVVVILTPRD---------------EVNLFIAQLVMKDFGVKRVVSL-VNDPG 103 (218)
T ss_dssp SH--------------HHHHHHTCCTTCEEEECCSCH---------------HHHHHHHHHHHHTSCCCEEEEC-CCSGG
T ss_pred CH--------------HHHHhcCcccCCEEEEecCCc---------------HHHHHHHHHHHHHcCCCeEEEE-EeCcc
Confidence 00 112222 67899999997543 2233444555554444434333 33344
Q ss_pred HHHHHHHHHhhccCCcccccCCCCC--chHHHHHHHHHHHHhcCC
Q psy11160 162 AAESIMNVLKANHKTNVQFQGRAAD--LKYVEAAARMIAEIATDN 204 (598)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~~~~~d--l~~l~~A~~~Ia~~l~~~ 204 (598)
..+.+.. + ..| .++-+.+.+.+++.+..+
T Consensus 104 ~~~~l~~-~-------------G~d~vi~p~~~~~~~l~~~~~~~ 134 (218)
T 3l4b_C 104 NMEIFKK-M-------------GITTVLNLTTLITNTVEALIFPD 134 (218)
T ss_dssp GHHHHHH-H-------------TCEECCCHHHHHHHHHHHHHCTT
T ss_pred hHHHHHH-C-------------CCCEEECHHHHHHHHHHHHhccC
Confidence 4444422 1 233 455667777787776543
No 192
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.94 E-value=4.7e-05 Score=77.80 Aligned_cols=96 Identities=10% Similarity=0.177 Sum_probs=70.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|..+|..+.. .|.+|+++|+++++.+.+.+-.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~---------------------------~G~~V~~~dr~~~~~~~~~~~g--------- 198 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA---------------------------LGAKVKVGARESDLLARIAEMG--------- 198 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESSHHHHHHHHHTT---------
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHHCC---------
Confidence 3689999999999999999998 7899999999998876554310
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.......++.+.++++|+|++++|... .+ . ...+.++++.++|+.+..+.++
T Consensus 199 --------~~~~~~~~l~~~l~~aDvVi~~~p~~~----------i~----~----~~l~~mk~~~~lin~ar~~~~~ 250 (293)
T 3d4o_A 199 --------MEPFHISKAAQELRDVDVCINTIPALV----------VT----A----NVLAEMPSHTFVIDLASKPGGT 250 (293)
T ss_dssp --------SEEEEGGGHHHHTTTCSEEEECCSSCC----------BC----H----HHHHHSCTTCEEEECSSTTCSB
T ss_pred --------CeecChhhHHHHhcCCCEEEECCChHH----------hC----H----HHHHhcCCCCEEEEecCCCCCC
Confidence 011112456778899999999986532 11 1 2334678999999998866554
No 193
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.92 E-value=4e-05 Score=79.25 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=75.7
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH---HHHHHHHcCCCCCCCC
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE---ERIRQWNSNKLPIYEP 81 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~---~~~~~~~~~~~~~~e~ 81 (598)
|||+||| +|+||.++|..|+.+. ....+++++|+++ .....++.. +.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~------------------------~~~~el~L~Di~~~~~G~a~Dl~~~--~~--- 51 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL------------------------PSGSELSLYDIAPVTPGVAVDLSHI--PT--- 51 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS------------------------CTTEEEEEECSSTTHHHHHHHHHTS--CS---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC------------------------CCCceEEEEecCCCchhHHHHhhCC--CC---
Confidence 6999999 8999999999998710 1236999999986 112223321 10
Q ss_pred ChHHHHhhhcCCceEE--ecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 82 GLDEVVKKTRDVNLFF--STDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~--~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
...++. +++..+++++||+||++.+.|.++..++.+ -..+.+.+++..+.|.++.++ .++++- |-
T Consensus 52 ----------~~~v~~~~~~~~~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~-a~vlvv-tN 119 (312)
T 3hhp_A 52 ----------AVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK-ACIGII-TN 119 (312)
T ss_dssp ----------SEEEEEECSSCCHHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEC-SS
T ss_pred ----------CceEEEecCCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-cEEEEe-cC
Confidence 012332 124446899999999999988766432111 122455677777788887644 444443 56
Q ss_pred chHHHHHH
Q psy11160 159 PVRAAESI 166 (598)
Q Consensus 159 ~~~~~~~~ 166 (598)
|.++.-.+
T Consensus 120 Pvd~~t~~ 127 (312)
T 3hhp_A 120 PVNTTVAI 127 (312)
T ss_dssp CHHHHHHH
T ss_pred cchhHHHH
Confidence 77776544
No 194
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.91 E-value=4.9e-05 Score=67.84 Aligned_cols=42 Identities=26% Similarity=0.406 Sum_probs=37.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
+++|.|+|+|.+|..++..|.. .|++|+++|+++++.+.+.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~---------------------------~g~~v~~~d~~~~~~~~~~~ 47 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR---------------------------MGHEVLAVDINEEKVNAYAS 47 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH---------------------------TTCCCEEEESCHHHHHTTTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHH
Confidence 4579999999999999999999 78999999999998876553
No 195
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.91 E-value=1.6e-05 Score=72.39 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=64.7
Q ss_pred CceEEEECC----ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 5 ISHICCIGA----GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 5 ~~~I~viG~----G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
..+|+|||+ |.||..++..|.+ .|++|+.++.+.+.+
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~---------------------------~G~~V~~vnp~~~~i------------ 54 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLS---------------------------KGFEVLPVNPNYDEI------------ 54 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHH---------------------------TTCEEEEECTTCSEE------------
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHH---------------------------CCCEEEEeCCCCCeE------------
Confidence 368999999 9999999999999 799866666542111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.+..+..++++..+.+|++++++|.+ .+.++++++.+ ...+.+++..||.
T Consensus 55 ------------~G~~~~~s~~el~~~vDlvii~vp~~---------------~v~~v~~~~~~-~g~~~i~~~~~~~ 104 (138)
T 1y81_A 55 ------------EGLKCYRSVRELPKDVDVIVFVVPPK---------------VGLQVAKEAVE-AGFKKLWFQPGAE 104 (138)
T ss_dssp ------------TTEECBSSGGGSCTTCCEEEECSCHH---------------HHHHHHHHHHH-TTCCEEEECTTSC
T ss_pred ------------CCeeecCCHHHhCCCCCEEEEEeCHH---------------HHHHHHHHHHH-cCCCEEEEcCccH
Confidence 13556677777777899999998732 46777777766 4556788887775
No 196
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.90 E-value=4.4e-05 Score=79.60 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=56.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||..++..|..+ ..+++++ ++|+++++.+.+.+...
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~-------------------------~~~~~l~av~d~~~~~~~~~~~~~g------- 49 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNK-------------------------LSGAEIVAVTDVNQEAAQKVVEQYQ------- 49 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-------------------------CSSEEEEEEECSSHHHHHHHHHHTT-------
T ss_pred eEEEEEECccHHHHHHHHHHHhh-------------------------CCCcEEEEEEcCCHHHHHHHHHHhC-------
Confidence 36999999999999999999841 1567766 78999999888764210
Q ss_pred HHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPT 119 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~ 119 (598)
-.....+|+++.+++ +|+|++|+|+..
T Consensus 50 ---------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 50 ---------LNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp ---------CCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred ---------CCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 013567899988876 899999987653
No 197
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.89 E-value=3.2e-05 Score=80.59 Aligned_cols=103 Identities=17% Similarity=0.257 Sum_probs=69.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||..++..|... .+++++ ++|+++++.+.+.+..
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~~~~~-------- 47 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI--------------------------DDAILYAISDVREDRLREMKEKL-------- 47 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS--------------------------TTEEEEEEECSCHHHHHHHHHHH--------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC--------------------------CCcEEEEEECCCHHHHHHHHHHh--------
Confidence 36999999999999999888761 567776 6899999988765420
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc-EEEEec-CCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNK-IVVEKS-TVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-ivv~~S-Tv~ 159 (598)
+.....+|+++.++ ++|+|++|+|+... .+ . +...+..++ +++.+. +..
T Consensus 48 ---------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h--------------~~-~---~~~al~~gk~v~~EKP~~~~ 100 (344)
T 3ezy_A 48 ---------GVEKAYKDPHELIEDPNVDAVLVCSSTNTH--------------SE-L---VIACAKAKKHVFCEKPLSLN 100 (344)
T ss_dssp ---------TCSEEESSHHHHHHCTTCCEEEECSCGGGH--------------HH-H---HHHHHHTTCEEEEESCSCSC
T ss_pred ---------CCCceeCCHHHHhcCCCCCEEEEcCCCcch--------------HH-H---HHHHHhcCCeEEEECCCCCC
Confidence 11246788888887 79999999876431 11 1 222334455 445543 566
Q ss_pred hHHHHHHHH
Q psy11160 160 VRAAESIMN 168 (598)
Q Consensus 160 ~~~~~~~~~ 168 (598)
+..++++..
T Consensus 101 ~~e~~~l~~ 109 (344)
T 3ezy_A 101 LADVDRMIE 109 (344)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666654
No 198
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.86 E-value=7.9e-05 Score=76.95 Aligned_cols=70 Identities=13% Similarity=0.197 Sum_probs=54.6
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+||+|||+|.||..++..|... .+++++ ++|+++++.+.+.+..
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~--------------------------~~~~~~~v~d~~~~~~~~~~~~~--------- 46 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTS--------------------------GEYQLVAIYSRKLETAATFASRY--------- 46 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------------------TSEEEEEEECSSHHHHHHHGGGS---------
T ss_pred eEEEEEeCCHHHHHHHHHHHhC--------------------------CCeEEEEEEeCCHHHHHHHHHHc---------
Confidence 6899999999999999998871 356764 8999999988765421
Q ss_pred HHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTP 118 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp 118 (598)
+.....+|+++.+ .++|+|++|+|+.
T Consensus 47 --------~~~~~~~~~~~~l~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 47 --------QNIQLFDQLEVFFKSSFDLVYIASPNS 73 (325)
T ss_dssp --------SSCEEESCHHHHHTSSCSEEEECSCGG
T ss_pred --------CCCeEeCCHHHHhCCCCCEEEEeCChH
Confidence 1124678888888 7899999998754
No 199
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.86 E-value=7.2e-05 Score=77.73 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=54.4
Q ss_pred CCceEEEECCChhHHHHHHHHH-HhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIA-LKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+++||+|||+|.||..++..|. . ..++++ .++|+++++.+.+.+..
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~--------------------------~~~~~~vav~d~~~~~~~~~a~~~------ 54 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNK--------------------------IQGVKLVAACALDSNQLEWAKNEL------ 54 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHT--------------------------CSSEEEEEEECSCHHHHHHHHHTT------
T ss_pred CcceEEEEcCCHHHHHHHHHHHhc--------------------------CCCcEEEEEecCCHHHHHHHHHHh------
Confidence 3579999999999999999988 4 056775 57899999988765421
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
+.....+|+++.++ ++|+|++|+|+.
T Consensus 55 -----------g~~~~~~~~~~~l~~~~~D~V~i~tp~~ 82 (346)
T 3cea_A 55 -----------GVETTYTNYKDMIDTENIDAIFIVAPTP 82 (346)
T ss_dssp -----------CCSEEESCHHHHHTTSCCSEEEECSCGG
T ss_pred -----------CCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 01145678888886 699999998654
No 200
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.84 E-value=4.4e-05 Score=80.28 Aligned_cols=104 Identities=8% Similarity=0.021 Sum_probs=74.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|..++..|... ....+|.+||+++++.+.+.+.... .++
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~-------------------------~~~~~V~V~~r~~~~a~~la~~~~~--~~g-- 179 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKH-------------------------LGIEEIVAYDTDPLATAKLIANLKE--YSG-- 179 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH-------------------------SCCCEEEEECSSHHHHHHHHHHHTT--CTT--
T ss_pred CCeEEEECCcHHHHHHHHHHHHh-------------------------CCCcEEEEEcCCHHHHHHHHHHHHh--ccC--
Confidence 46899999999999999888651 1357999999999999887642100 001
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.......++++++++||+||+|+|.+... +-+ . .+.+++++.|+..+|..|+.
T Consensus 180 --------~~~~~~~~~~eav~~aDiVi~aTps~~~~--------pvl---~------~~~l~~G~~V~~vgs~~p~~ 232 (350)
T 1x7d_A 180 --------LTIRRASSVAEAVKGVDIITTVTADKAYA--------TII---T------PDMLEPGMHLNAVGGDCPGK 232 (350)
T ss_dssp --------CEEEECSSHHHHHTTCSEEEECCCCSSEE--------EEE---C------GGGCCTTCEEEECSCCBTTB
T ss_pred --------ceEEEeCCHHHHHhcCCEEEEeccCCCCC--------cee---c------HHHcCCCCEEEECCCCCCCc
Confidence 12456688988999999999998765210 101 0 14578999999999988873
No 201
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.82 E-value=7e-05 Score=78.43 Aligned_cols=127 Identities=16% Similarity=0.231 Sum_probs=82.0
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH--HHH----HHHcCCCCC
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE--RIR----QWNSNKLPI 78 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~--~~~----~~~~~~~~~ 78 (598)
-||+|+|+ |.+|.+++..|+. +.++|-. .-.++.++|+++. +++ .++....|.
T Consensus 25 vKVaViGAaG~IG~~la~~la~-------------------~~l~~~~-~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~ 84 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIAR-------------------GALLGPT-TPVELRLLDIEPALKALAGVEAELEDCAFPL 84 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH-------------------TTTTCTT-CCEEEEEECCGGGHHHHHHHHHHHHHTTCTT
T ss_pred CEEEEECcCcHHHHHHHHHHHh-------------------ccccCCC-CccEEEEECCCCccccchhhhhhhhhcCccC
Confidence 39999996 9999999999998 1121111 1248999999763 222 233322221
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
......++++.+++++||+|||+-..|.++..++.+ -..+.+.+++..+.|.++..++.+|++- |
T Consensus 85 -------------~~~~~~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvv-s 150 (345)
T 4h7p_A 85 -------------LDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVV-G 150 (345)
T ss_dssp -------------EEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-S
T ss_pred -------------CCcEEEcCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEe-C
Confidence 134667888888999999999998888776543211 1234556677777788887787765442 3
Q ss_pred CchHHHHHH
Q psy11160 158 VPVRAAESI 166 (598)
Q Consensus 158 v~~~~~~~~ 166 (598)
-|..+.-.+
T Consensus 151 NPvd~~~~i 159 (345)
T 4h7p_A 151 NPANTNALI 159 (345)
T ss_dssp SSHHHHHHH
T ss_pred CCcchHHHH
Confidence 466555433
No 202
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.81 E-value=1.5e-05 Score=80.15 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=68.8
Q ss_pred eEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHHH
Q psy11160 7 HICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDEV 86 (598)
Q Consensus 7 ~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~~ 86 (598)
+|+|||+|.||.++|..|.. .|++|+++|+++++.+.+.+..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~---------------------------~g~~v~v~~r~~~~~~~l~~~~----------- 159 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALRE---------------------------AGLEVWVWNRTPQRALALAEEF----------- 159 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSHHHHHHHHHHH-----------
T ss_pred eEEEECCcHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHHHHh-----------
Confidence 89999999999999999999 7889999999999888765310
Q ss_pred HhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 87 VKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+.. ..++.++ +++|+||+|+|.+..... .. .+ . .+.++++++|++.++.|..+
T Consensus 160 -------~~~-~~~~~~~-~~~Divi~~tp~~~~~~~-----~~---~l----~--~~~l~~g~~viD~~~~p~~t 212 (263)
T 2d5c_A 160 -------GLR-AVPLEKA-REARLLVNATRVGLEDPS-----AS---PL----P--AELFPEEGAAVDLVYRPLWT 212 (263)
T ss_dssp -------TCE-ECCGGGG-GGCSEEEECSSTTTTCTT-----CC---SS----C--GGGSCSSSEEEESCCSSSSC
T ss_pred -------ccc-hhhHhhc-cCCCEEEEccCCCCCCCC-----CC---CC----C--HHHcCCCCEEEEeecCCccc
Confidence 012 3466667 899999999887642110 00 01 0 24567899999988875544
No 203
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.80 E-value=2.8e-05 Score=80.16 Aligned_cols=74 Identities=12% Similarity=0.164 Sum_probs=51.0
Q ss_pred CCCCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~ 78 (598)
|+.+++||+|||+|.||.. ++..|... .+++++ ++|+++++.+.+.+..
T Consensus 1 m~m~~~~vgiiG~G~~g~~~~~~~l~~~--------------------------~~~~lvav~d~~~~~~~~~~~~~--- 51 (319)
T 1tlt_A 1 MSLKKLRIGVVGLGGIAQKAWLPVLAAA--------------------------SDWTLQGAWSPTRAKALPICESW--- 51 (319)
T ss_dssp ----CEEEEEECCSTHHHHTHHHHHHSC--------------------------SSEEEEEEECSSCTTHHHHHHHH---
T ss_pred CCCCcceEEEECCCHHHHHHHHHHHHhC--------------------------CCeEEEEEECCCHHHHHHHHHHc---
Confidence 4445679999999999997 88877651 567876 8999998887665310
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
+...++++++...++|+|++|+|+.
T Consensus 52 ---------------g~~~~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 52 ---------------RIPYADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp ---------------TCCBCSSHHHHHTTCSEEEECSCTT
T ss_pred ---------------CCCccCcHHHhhcCCCEEEEeCCch
Confidence 1113456664446799999998754
No 204
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.80 E-value=3.9e-05 Score=78.98 Aligned_cols=69 Identities=16% Similarity=0.254 Sum_probs=52.7
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+++||+|||+|.||..++..|.+. .++++ .++|+++++.+.+.+.
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~--------------------------~~~~~v~v~d~~~~~~~~~~~~-------- 54 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--------------------------PGAALVRLASSNPDNLALVPPG-------- 54 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--------------------------TTEEEEEEEESCHHHHTTCCTT--------
T ss_pred CcceEEEECCcHHHHHHHHHHHhC--------------------------CCcEEEEEEeCCHHHHHHHHhh--------
Confidence 357999999999999999999871 46665 5899999887643321
Q ss_pred hHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
....+|+++.++ ++|+|++|+|+.
T Consensus 55 ------------~~~~~~~~~~l~~~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 55 ------------CVIESDWRSVVSAPEVEAVIIATPPA 80 (315)
T ss_dssp ------------CEEESSTHHHHTCTTCCEEEEESCGG
T ss_pred ------------CcccCCHHHHhhCCCCCEEEEeCChH
Confidence 235678888885 799999998654
No 205
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.80 E-value=7.8e-05 Score=78.07 Aligned_cols=71 Identities=8% Similarity=0.176 Sum_probs=54.4
Q ss_pred CceEEEECCChhHH-HHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGG-PTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~-~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.||. .++..|... .+++|+ ++|+++++.+.+.+.
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~a~~-------- 72 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE--------------------------PLTEVTAIASRRWDRAKRFTER-------- 72 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--------------------------TTEEEEEEEESSHHHHHHHHHH--------
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC--------------------------CCeEEEEEEcCCHHHHHHHHHH--------
Confidence 46999999999998 788888871 477876 789999998876642
Q ss_pred hHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
-++...+|+++.++ +.|+|+||+|+..
T Consensus 73 ----------~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 73 ----------FGGEPVEGYPALLERDDVDAVYVPLPAVL 101 (350)
T ss_dssp ----------HCSEEEESHHHHHTCTTCSEEEECCCGGG
T ss_pred ----------cCCCCcCCHHHHhcCCCCCEEEECCCcHH
Confidence 02334588888886 5899999987653
No 206
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.77 E-value=3.1e-05 Score=80.24 Aligned_cols=76 Identities=11% Similarity=0.092 Sum_probs=52.1
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~ 79 (598)
|..+++||+|||+|.||..++..|... .+.+|+ ++|+++++.+.+.+..
T Consensus 1 M~m~~~rigiiG~G~ig~~~~~~l~~~--------------------------~~~~~~av~d~~~~~~~~~a~~~---- 50 (329)
T 3evn_A 1 MSLSKVRYGVVSTAKVAPRFIEGVRLA--------------------------GNGEVVAVSSRTLESAQAFANKY---- 50 (329)
T ss_dssp ----CEEEEEEBCCTTHHHHHHHHHHH--------------------------CSEEEEEEECSCSSTTCC---CC----
T ss_pred CCCCceEEEEEechHHHHHHHHHHHhC--------------------------CCcEEEEEEcCCHHHHHHHHHHc----
Confidence 444567999999999999999988871 456655 6799988776554321
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+.....+|+++.++ ++|+|+||+|+..
T Consensus 51 -------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (329)
T 3evn_A 51 -------------HLPKAYDKLEDMLADESIDVIYVATINQD 79 (329)
T ss_dssp -------------CCSCEESCHHHHHTCTTCCEEEECSCGGG
T ss_pred -------------CCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 00135688888887 7899999987653
No 207
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.76 E-value=0.0001 Score=77.55 Aligned_cols=101 Identities=21% Similarity=0.351 Sum_probs=66.9
Q ss_pred CCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+++||+|||+|.+|.. .+..+.. ..+++|+ ++|++++++....
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~--------------------------~~~~~l~av~d~~~~~~~~~~--------- 50 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRS--------------------------VPGLNLAFVASRDEEKVKRDL--------- 50 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHT--------------------------STTEEEEEEECSCHHHHHHHC---------
T ss_pred CcceEEEECCCHHHHHHHHHHHhh--------------------------CCCeEEEEEEcCCHHHHHhhC---------
Confidence 4579999999999997 6666665 0467775 7899998865211
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec--C
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS--T 157 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S--T 157 (598)
......+|+++.++ +.|+|+||+|+... . +.+...+..|+-|+.+. +
T Consensus 51 -----------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H--------------~----~~~~~al~aGk~Vl~EKPla 101 (364)
T 3e82_A 51 -----------PDVTVIASPEAAVQHPDVDLVVIASPNATH--------------A----PLARLALNAGKHVVVDKPFT 101 (364)
T ss_dssp -----------TTSEEESCHHHHHTCTTCSEEEECSCGGGH--------------H----HHHHHHHHTTCEEEECSCSC
T ss_pred -----------CCCcEECCHHHHhcCCCCCEEEEeCChHHH--------------H----HHHHHHHHCCCcEEEeCCCc
Confidence 12456789998887 78999999766532 1 22233445677677666 4
Q ss_pred CchHHHHHHHH
Q psy11160 158 VPVRAAESIMN 168 (598)
Q Consensus 158 v~~~~~~~~~~ 168 (598)
.....++++..
T Consensus 102 ~~~~e~~~l~~ 112 (364)
T 3e82_A 102 LDMQEARELIA 112 (364)
T ss_dssp SSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 45555555543
No 208
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.74 E-value=6e-05 Score=79.21 Aligned_cols=75 Identities=11% Similarity=0.161 Sum_probs=55.2
Q ss_pred CCCCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~ 78 (598)
|+.+.+||+|||+|.+|.. ++..|... ++.+|+ ++|+++++.+.+.+..
T Consensus 1 M~M~~~rigiIG~G~~g~~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~a~~~--- 51 (359)
T 3m2t_A 1 MSLSLIKVGLVGIGAQMQENLLPSLLQM--------------------------QDIRIVAACDSDLERARRVHRFI--- 51 (359)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTC--------------------------TTEEEEEEECSSHHHHGGGGGTS---
T ss_pred CCCCcceEEEECCCHHHHHHHHHHHHhC--------------------------CCcEEEEEEcCCHHHHHHHHHhc---
Confidence 5444579999999999985 78888761 467876 7899999988776431
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTP 118 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp 118 (598)
......+|+++.+++ .|+|+||+|+.
T Consensus 52 --------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 79 (359)
T 3m2t_A 52 --------------SDIPVLDNVPAMLNQVPLDAVVMAGPPQ 79 (359)
T ss_dssp --------------CSCCEESSHHHHHHHSCCSEEEECSCHH
T ss_pred --------------CCCcccCCHHHHhcCCCCCEEEEcCCcH
Confidence 123456889888875 49999997654
No 209
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.71 E-value=0.00016 Score=75.80 Aligned_cols=106 Identities=15% Similarity=0.243 Sum_probs=69.1
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+++||+|||+|.||..++..|... .++++ .++|+++++.+.+.+... +
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~--------------------------~~~~lv~v~d~~~~~~~~~a~~~~-~---- 53 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA--------------------------PNATISGVASRSLEKAKAFATANN-Y---- 53 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC--------------------------TTEEEEEEECSSHHHHHHHHHHTT-C----
T ss_pred CceEEEEECchHHHHHHHHHHhhC--------------------------CCcEEEEEEcCCHHHHHHHHHHhC-C----
Confidence 357999999999999999888871 45665 578999999887654210 0
Q ss_pred hHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec--CC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS--TV 158 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S--Tv 158 (598)
.......+|+++.++ ++|+|++|+|+... .+.+...+..++-|+.+. +.
T Consensus 54 ---------~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h------------------~~~~~~al~aGk~V~~EKP~a~ 106 (362)
T 1ydw_A 54 ---------PESTKIHGSYESLLEDPEIDALYVPLPTSLH------------------VEWAIKAAEKGKHILLEKPVAM 106 (362)
T ss_dssp ---------CTTCEEESSHHHHHHCTTCCEEEECCCGGGH------------------HHHHHHHHTTTCEEEECSSCSS
T ss_pred ---------CCCCeeeCCHHHHhcCCCCCEEEEcCChHHH------------------HHHHHHHHHCCCeEEEecCCcC
Confidence 001356788888886 58999999865431 122334456677665554 34
Q ss_pred chHHHHHHH
Q psy11160 159 PVRAAESIM 167 (598)
Q Consensus 159 ~~~~~~~~~ 167 (598)
....++++.
T Consensus 107 ~~~e~~~l~ 115 (362)
T 1ydw_A 107 NVTEFDKIV 115 (362)
T ss_dssp SHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 444444444
No 210
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.71 E-value=0.0001 Score=77.31 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=55.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||..++..|..+ ..+++|+ ++|+++++.+.+.+...
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~-------------------------~~~~~lvav~d~~~~~~~~~a~~~g------- 70 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANT-------------------------VSGVEVVAVCDIVAGRAQAALDKYA------- 70 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-------------------------CTTEEEEEEECSSTTHHHHHHHHHT-------
T ss_pred eeeEEEECCcHHHHHHHHHHHhh-------------------------CCCcEEEEEEeCCHHHHHHHHHHhC-------
Confidence 36899999999999999999841 1567766 68999999887664200
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
......+|+++.++ +.|+|+||+|+..
T Consensus 71 ---------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 71 ---------IEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp ---------CCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred ---------CCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 01356788988887 4899999987653
No 211
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.70 E-value=0.0002 Score=74.77 Aligned_cols=123 Identities=12% Similarity=0.148 Sum_probs=80.4
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-------eEEEEeCCH--HHHH----H
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-------QVTVVDKSE--ERIR----Q 70 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------~v~~~d~~~--~~~~----~ 70 (598)
-+||+|+| +|.+|.++|..|+. .|. .+.++|+++ ++.+ .
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~---------------------------~~~~~e~~~~~l~L~Di~~~~~~~~g~a~D 55 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGN---------------------------GSVFGKDQPIILVLLDITPMMGVLDGVLME 55 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHT---------------------------TTTTCTTCCEEEEEECCGGGHHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHh---------------------------CCCccccCCCEEEEEeCCCccccchhhHhh
Confidence 46999999 79999999999988 332 399999974 3333 2
Q ss_pred HHcCCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCC
Q psy11160 71 WNSNKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDN 149 (598)
Q Consensus 71 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~ 149 (598)
++....++. .....+++..+++++||+||++...|..+..++.+ -..+.+.+++..+.|.++.+++
T Consensus 56 L~~~~~~~~-------------~~~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~ 122 (333)
T 5mdh_A 56 LQDCALPLL-------------KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKS 122 (333)
T ss_dssp HHHTCCTTE-------------EEEEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTT
T ss_pred hHhhhhccc-------------CCEEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 333222221 23566777777999999999998777655432211 1234566777778888877666
Q ss_pred cEEEEecCCchHHHHHHHH
Q psy11160 150 KIVVEKSTVPVRAAESIMN 168 (598)
Q Consensus 150 ~ivv~~STv~~~~~~~~~~ 168 (598)
.++++ -|-|..+.-.++.
T Consensus 123 ~~viv-vsNPvd~~t~~~~ 140 (333)
T 5mdh_A 123 VKVIV-VGNPANTNCLTAS 140 (333)
T ss_dssp CEEEE-CSSSHHHHHHHHH
T ss_pred eEEEE-cCCchHHHHHHHH
Confidence 53333 3456666655544
No 212
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.69 E-value=5e-05 Score=80.27 Aligned_cols=99 Identities=14% Similarity=0.150 Sum_probs=69.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||.++|..|++ . ++|+++|+++++++.+.+...++.
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~---------------------------~-~~V~V~~R~~~~a~~la~~~~~~~----- 62 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKD---------------------------E-FDVYIGDVNNENLEKVKEFATPLK----- 62 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT---------------------------T-SEEEEEESCHHHHHHHTTTSEEEE-----
T ss_pred CCeEEEEcCCHHHHHHHHHHHc---------------------------C-CeEEEEECCHHHHHHHHhhCCeEE-----
Confidence 4689999999999999999998 6 899999999999998764211000
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
....-..++.++++++|+||.|+|... . ..+ +...+..++.+++.|+.++.+
T Consensus 63 --------~d~~~~~~l~~ll~~~DvVIn~~P~~~-----------~----~~v---~~a~l~~G~~~vD~s~~~~~~ 114 (365)
T 2z2v_A 63 --------VDASNFDKLVEVMKEFELVIGALPGFL-----------G----FKS---IKAAIKSKVDMVDVSFMPENP 114 (365)
T ss_dssp --------CCTTCHHHHHHHHTTCSCEEECCCHHH-----------H----HHH---HHHHHHTTCCEEECCCCSSCG
T ss_pred --------EecCCHHHHHHHHhCCCEEEECCChhh-----------h----HHH---HHHHHHhCCeEEEccCCcHHH
Confidence 000001345677889999999965431 1 112 233456788899988876654
No 213
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.65 E-value=0.00013 Score=75.43 Aligned_cols=69 Identities=14% Similarity=0.142 Sum_probs=51.7
Q ss_pred ceEEEECCChhHHHH-HHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPT-CSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~-a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+||+|||+|.||..+ +..|.+ .+++++ ++|+++++.+.+.+...
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~---------------------------~~~~~vav~d~~~~~~~~~~~~~g------- 46 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA---------------------------TGGEVVSMMSTSAERGAAYATENG------- 46 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH---------------------------TTCEEEEEECSCHHHHHHHHHHTT-------
T ss_pred CeEEEEcccHHHHHhhhHHhhc---------------------------CCCeEEEEECCCHHHHHHHHHHcC-------
Confidence 489999999999998 778877 677765 78999999887654210
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
.....+|+++.++ ++|+|++|+|..
T Consensus 47 ----------~~~~~~~~~~~l~~~~~D~V~i~tp~~ 73 (332)
T 2glx_A 47 ----------IGKSVTSVEELVGDPDVDAVYVSTTNE 73 (332)
T ss_dssp ----------CSCCBSCHHHHHTCTTCCEEEECSCGG
T ss_pred ----------CCcccCCHHHHhcCCCCCEEEEeCChh
Confidence 0023467777776 599999998754
No 214
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.65 E-value=6.5e-05 Score=80.14 Aligned_cols=117 Identities=16% Similarity=0.165 Sum_probs=74.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
.||+|||+|.+|..+|..+.. .|.+|+++|+++++.+.+.+-...+.+-.+.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~---------------------------lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~ 243 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARR---------------------------LGAVVSATDVRPAAKEQVASLGAKFIAVEDEE 243 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSTTHHHHHHHTTCEECCCCC--
T ss_pred CEEEEECCcHHHHHHHHHHHH---------------------------CCCEEEEEcCCHHHHHHHHHcCCceeeccccc
Confidence 689999999999999999988 78999999999999888775211111100000
Q ss_pred HHhhhcCCceEE-----------ecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 86 VVKKTRDVNLFF-----------STDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 86 ~~~~~~~~~~~~-----------~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
. +......... ..++.+++++||+||.|+..|... .+.+ +.++..+.++++.+||+
T Consensus 244 ~-~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~-------ap~L-----vt~emv~~Mk~GsVIVD 310 (405)
T 4dio_A 244 F-KAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRP-------APRL-----VTREMLDSMKPGSVVVD 310 (405)
T ss_dssp ----------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSC-------CCCC-----BCHHHHTTSCTTCEEEE
T ss_pred c-cccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCC-------CCEE-----ecHHHHhcCCCCCEEEE
Confidence 0 0000000001 125677899999999997655321 1111 12466678899999999
Q ss_pred ecCCchHH
Q psy11160 155 KSTVPVRA 162 (598)
Q Consensus 155 ~STv~~~~ 162 (598)
.|.-+.|.
T Consensus 311 vA~d~GG~ 318 (405)
T 4dio_A 311 LAVERGGN 318 (405)
T ss_dssp TTGGGTCS
T ss_pred EeCCCCCC
Confidence 87655444
No 215
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.64 E-value=6.1e-05 Score=79.72 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=73.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~~~ 84 (598)
.||+|||+|.+|..+|..+.. .|.+|+++|+++++.+.+.+ |...+ +...+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~---------------------------lGa~V~v~D~~~~~l~~~~~lGa~~~-~l~~~ 236 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKR---------------------------LGAKTTGYDVRPEVAEQVRSVGAQWL-DLGID 236 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHH---------------------------HTCEEEEECSSGGGHHHHHHTTCEEC-CCC--
T ss_pred CEEEEECchHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHcCCeEE-ecccc
Confidence 689999999999999999888 68899999999998888775 22111 10000
Q ss_pred HHHhhhcCCce---------EEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe
Q psy11160 85 EVVKKTRDVNL---------FFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK 155 (598)
Q Consensus 85 ~~~~~~~~~~~---------~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ 155 (598)
... ..... ....++.+++++||+||.++..|... .+.+ +.++..+.++++.+||+.
T Consensus 237 -~~~--~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~-------ap~L-----vt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 237 -AAG--EGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGRP-------APRL-----VTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp --------------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSC-------CCCC-----BCHHHHHTSCTTCEEEET
T ss_pred -ccc--cccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcc-------ccee-----ecHHHHhcCCCCcEEEEE
Confidence 000 00000 00235677899999999997555321 1111 124566788999999998
Q ss_pred cCCchHH
Q psy11160 156 STVPVRA 162 (598)
Q Consensus 156 STv~~~~ 162 (598)
|.-+.|.
T Consensus 302 A~d~GG~ 308 (381)
T 3p2y_A 302 AGETGGN 308 (381)
T ss_dssp TGGGTCS
T ss_pred eCCCCCc
Confidence 7655554
No 216
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.64 E-value=0.00025 Score=77.58 Aligned_cols=92 Identities=14% Similarity=0.029 Sum_probs=69.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|.+|++||+++.+......
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~---------------------------~G~~V~v~d~~~~~~~~a~~----------- 318 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRG---------------------------LGATVWVTEIDPICALQAAM----------- 318 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEECSCHHHHHHHHT-----------
T ss_pred CCEEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEEeCChHhHHHHHH-----------
Confidence 3689999999999999999988 78999999999987533221
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
.+... .++++++++||+|++++.|+. ..+ +...+.++++.++++.++..+
T Consensus 319 --------~G~~~-~~l~ell~~aDiVi~~~~t~~---------lI~--------~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 319 --------EGYRV-VTMEYAADKADIFVTATGNYH---------VIN--------HDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp --------TTCEE-CCHHHHTTTCSEEEECSSSSC---------SBC--------HHHHHHCCTTEEEEECSSSSC
T ss_pred --------cCCEe-CCHHHHHhcCCEEEECCCccc---------ccC--------HHHHhhCCCCcEEEEcCCCcc
Confidence 01222 368889999999999985432 111 245567899999999888654
No 217
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.63 E-value=8.3e-05 Score=76.78 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=49.9
Q ss_pred CceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||.. ++..|... .+.+|+++|+++++.+.+.+... +
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~--------------------------~~~~l~v~d~~~~~~~~~a~~~g-~----- 49 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW--------------------------PDIELVLCTRNPKVLGTLATRYR-V----- 49 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS--------------------------TTEEEEEECSCHHHHHHHHHHTT-C-----
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC--------------------------CCceEEEEeCCHHHHHHHHHHcC-C-----
Confidence 369999999999984 88888661 46788899999999987764210 0
Q ss_pred HHHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTP 118 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp 118 (598)
. ....+..+.+ .++|+|++|+|+.
T Consensus 50 ----------~-~~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 50 ----------S-ATCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp ----------C-CCCSSTTGGGGGCCSEEEECSCGG
T ss_pred ----------C-ccccCHHHHhhcCCCEEEEECCch
Confidence 0 0022333355 6899999998754
No 218
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.63 E-value=0.00022 Score=77.73 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=69.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.||..+|..+.. .|.+|++||+++.+.......
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~---------------------------~G~~Viv~d~~~~~~~~a~~~---------- 299 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKG---------------------------LGARVYITEIDPICAIQAVME---------- 299 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH---------------------------HTCEEEEECSCHHHHHHHHTT----------
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---------------------------CcCEEEEEeCChhhHHHHHHc----------
Confidence 4689999999999999999988 689999999999876332211
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
+... .++++++++||+|++++.+.. ..+ +...+.++++.++++.++..+
T Consensus 300 ---------g~~~-~~l~ell~~aDiVi~~~~t~~---------lI~--------~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 300 ---------GFNV-VTLDEIVDKGDFFITCTGNVD---------VIK--------LEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp ---------TCEE-CCHHHHTTTCSEEEECCSSSS---------SBC--------HHHHTTCCTTCEEEECSSTTT
T ss_pred ---------CCEe-cCHHHHHhcCCEEEECCChhh---------hcC--------HHHHhhcCCCcEEEEeCCCCc
Confidence 1222 468889999999999964432 111 234567899999999998766
No 219
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.61 E-value=4.4e-05 Score=70.01 Aligned_cols=86 Identities=9% Similarity=0.041 Sum_probs=62.3
Q ss_pred ceEEEECC----ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH--HHHHHHHcCCCCCC
Q psy11160 6 SHICCIGA----GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE--ERIRQWNSNKLPIY 79 (598)
Q Consensus 6 ~~I~viG~----G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~--~~~~~~~~~~~~~~ 79 (598)
.+|+|||+ |.+|..++..|.+ .|++|+.++.+. +.+
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~---------------------------~G~~v~~vnp~~~g~~i----------- 55 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLD---------------------------QGYHVIPVSPKVAGKTL----------- 55 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHH---------------------------HTCCEEEECSSSTTSEE-----------
T ss_pred CEEEEECcCCCCCChHHHHHHHHHH---------------------------CCCEEEEeCCccccccc-----------
Confidence 57999999 8999999999998 788866666543 111
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.+..+..++++....+|++++++|.+ .+.++++++.+ ...+.+++..||.
T Consensus 56 -------------~G~~~~~sl~el~~~~Dlvii~vp~~---------------~v~~v~~~~~~-~g~~~i~i~~~~~ 105 (145)
T 2duw_A 56 -------------LGQQGYATLADVPEKVDMVDVFRNSE---------------AAWGVAQEAIA-IGAKTLWLQLGVI 105 (145)
T ss_dssp -------------TTEECCSSTTTCSSCCSEEECCSCST---------------HHHHHHHHHHH-HTCCEEECCTTCC
T ss_pred -------------CCeeccCCHHHcCCCCCEEEEEeCHH---------------HHHHHHHHHHH-cCCCEEEEcCChH
Confidence 13455566766667899999998742 46777777776 4455677776666
No 220
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.57 E-value=0.00015 Score=75.45 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=54.1
Q ss_pred CCCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCC
Q psy11160 2 VQTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 2 ~~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~ 79 (598)
.++|+||+|||+|.+|.. ++..+..- ++.+|+ ++|+++++.+.+.+..
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~--------------------------~~~~lvav~d~~~~~a~~~a~~~---- 69 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDA--------------------------ENCVVTAIASRDLTRAREMADRF---- 69 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHC--------------------------SSEEEEEEECSSHHHHHHHHHHH----
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhC--------------------------CCeEEEEEECCCHHHHHHHHHHc----
Confidence 456789999999999975 45566650 467766 6899999998876420
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+--+..+|+++.++ +.|+|+||+|++.
T Consensus 70 -------------g~~~~y~d~~ell~~~~iDaV~I~tP~~~ 98 (350)
T 4had_A 70 -------------SVPHAFGSYEEMLASDVIDAVYIPLPTSQ 98 (350)
T ss_dssp -------------TCSEEESSHHHHHHCSSCSEEEECSCGGG
T ss_pred -------------CCCeeeCCHHHHhcCCCCCEEEEeCCCch
Confidence 11246788998885 4799999987654
No 221
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.57 E-value=0.00027 Score=77.42 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=69.4
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++|+|||+|.||..+|..+.. .|.+|+++|+++.+.+...+-
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka---------------------------~Ga~Viv~d~~~~~~~~A~~~--------- 316 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKG---------------------------QGARVSVTEIDPINALQAMME--------- 316 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHT---------
T ss_pred CcCEEEEEccCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHc---------
Confidence 34789999999999999999988 789999999999987665431
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
+.. ..+++++++.+|+||.+++++.- +. ....+.++++.++++.+...
T Consensus 317 ----------Ga~-~~~l~e~l~~aDvVi~atgt~~~--------------i~---~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 317 ----------GFD-VVTVEEAIGDADIVVTATGNKDI--------------IM---LEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp ----------TCE-ECCHHHHGGGCSEEEECSSSSCS--------------BC---HHHHHHSCTTCEEEECSSSG
T ss_pred ----------CCE-EecHHHHHhCCCEEEECCCCHHH--------------HH---HHHHHhcCCCcEEEEeCCCC
Confidence 122 23566788999999999866521 11 23456688999999877654
No 222
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.55 E-value=0.00022 Score=73.92 Aligned_cols=114 Identities=18% Similarity=0.244 Sum_probs=68.5
Q ss_pred CCCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-------eEEEEeCCH--HHHH--
Q psy11160 2 VQTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-------QVTVVDKSE--ERIR-- 69 (598)
Q Consensus 2 ~~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------~v~~~d~~~--~~~~-- 69 (598)
|.+.|||.|+|+ |++|.+++..|.. .|+ +|+++|+++ ++.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~---------------------------~g~~~~~~~~ev~l~D~~~~~~~~~g~ 53 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAA---------------------------GEMLGKDQPVILQLLEIPQAMKALEGV 53 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHT---------------------------TTTTCTTCCEEEEEECCGGGHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHh---------------------------CCCCCCCCCCEEEEEeCCCchhhccch
Confidence 344579999997 9999999999988 564 899999974 3322
Q ss_pred --HHHcCCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCC-CCCCcchHHHHHHHHHHHHHc
Q psy11160 70 --QWNSNKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNG-KGRAADLKYVEAAARMIAEIA 146 (598)
Q Consensus 70 --~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~-~~~~~~~~~~~~~~~~i~~~~ 146 (598)
.+.....++ . ..++.+.+..++++++|+||.+...+..+.... .....+...+.++++.+.+..
T Consensus 54 ~~dl~~~~~~~------------~-~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~ 120 (327)
T 1y7t_A 54 VMELEDCAFPL------------L-AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVA 120 (327)
T ss_dssp HHHHHTTTCTT------------E-EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhhhcccccc------------c-CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222211111 0 235566777788999999999986654321100 001123344555556666654
Q ss_pred CCC-cEEEEe
Q psy11160 147 TDN-KIVVEK 155 (598)
Q Consensus 147 ~~~-~ivv~~ 155 (598)
.++ .+++..
T Consensus 121 ~~~~~vvv~s 130 (327)
T 1y7t_A 121 KKDVKVLVVG 130 (327)
T ss_dssp CTTCEEEECS
T ss_pred CCCeEEEEeC
Confidence 244 444443
No 223
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.55 E-value=0.00028 Score=73.13 Aligned_cols=102 Identities=13% Similarity=0.161 Sum_probs=67.4
Q ss_pred CceEEEECCChhHH-HHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGG-PTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~-~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.+|. .++..|.. .+++| .++|+++++.+.+.+..
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---------------------------~~~~lvav~d~~~~~~~~~a~~~------- 49 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---------------------------AGAELAGVFESDSDNRAKFTSLF------- 49 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---------------------------TTCEEEEEECSCTTSCHHHHHHS-------
T ss_pred ccEEEEECCChHHHHHhhhhhcC---------------------------CCcEEEEEeCCCHHHHHHHHHhc-------
Confidence 46999999999996 67777766 67885 58899998887765421
Q ss_pred hHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc-EEEEe-cCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNK-IVVEK-STV 158 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-ivv~~-STv 158 (598)
......+|+++.++ +.|+|+||+|+... .+ .+...+..|+ +++++ .+.
T Consensus 50 ----------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h--------------~~----~~~~al~aGkhVl~EKP~a~ 101 (336)
T 2p2s_A 50 ----------PSVPFAASAEQLITDASIDLIACAVIPCDR--------------AE----LALRTLDAGKDFFTAKPPLT 101 (336)
T ss_dssp ----------TTCCBCSCHHHHHTCTTCCEEEECSCGGGH--------------HH----HHHHHHHTTCEEEECSSCCS
T ss_pred ----------CCCcccCCHHHHhhCCCCCEEEEeCChhhH--------------HH----HHHHHHHCCCcEEEeCCCCC
Confidence 01234678888876 68999999876532 11 2223344566 44544 455
Q ss_pred chHHHHHHHH
Q psy11160 159 PVRAAESIMN 168 (598)
Q Consensus 159 ~~~~~~~~~~ 168 (598)
.+..++++..
T Consensus 102 ~~~e~~~l~~ 111 (336)
T 2p2s_A 102 TLEQLDAVQR 111 (336)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5666666554
No 224
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.54 E-value=0.00028 Score=74.55 Aligned_cols=126 Identities=11% Similarity=0.125 Sum_probs=75.4
Q ss_pred CCceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeCCH----HHHH----HHH
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDKSE----ERIR----QWN 72 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~~----~~~~----~~~ 72 (598)
..+||+|+| +|.+|.++|..|+.+ .+ .+ -++.++|++. ++++ .|+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~-------------------~l-----~~e~~~l~L~d~d~~~~~~~~~G~amDL~ 86 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASG-------------------EV-----FGQDQPIALKLLGSERSFQALEGVAMELE 86 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-------------------TT-----TCTTCCEEEEEECCGGGHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHcC-------------------Cc-----CCCCceeEEEecCccchhhhhHHHHHhHH
Confidence 347999999 799999999999981 00 11 1377765533 2232 233
Q ss_pred cCCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCC-CCcchHHHHHHHHHHHHHcCCCcE
Q psy11160 73 SNKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKG-RAADLKYVEAAARMIAEIATDNKI 151 (598)
Q Consensus 73 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~i 151 (598)
.+..|+. .+.+.+++..+++++||+||++-..|.++..++.+ -..+.+.+++..+.|.++..++.+
T Consensus 87 h~~~p~~-------------~~v~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~i 153 (375)
T 7mdh_A 87 DSLYPLL-------------REVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVK 153 (375)
T ss_dssp TTTCTTE-------------EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhc-------------CCcEEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 3322221 23455666667999999999998777665432111 122345566666677777556665
Q ss_pred EEEecCCchHHHHHHH
Q psy11160 152 VVEKSTVPVRAAESIM 167 (598)
Q Consensus 152 vv~~STv~~~~~~~~~ 167 (598)
|++-| -|..+.-.++
T Consensus 154 vlVvs-NPvD~~t~ia 168 (375)
T 7mdh_A 154 VLVVG-NPCNTNALIC 168 (375)
T ss_dssp EEECS-SSHHHHHHHH
T ss_pred EEEec-CchhHHHHHH
Confidence 55433 5666654443
No 225
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.53 E-value=0.00046 Score=72.06 Aligned_cols=70 Identities=16% Similarity=0.286 Sum_probs=52.0
Q ss_pred CCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+++||+|||+|.+|.. .+..+... .+.+|+ ++|+++++.+. . .
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~--------------------------~~~~l~av~d~~~~~~~~---~-~----- 50 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT--------------------------PGLELAGVSSSDASKVHA---D-W----- 50 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS--------------------------TTEEEEEEECSCHHHHHT---T-C-----
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC--------------------------CCcEEEEEECCCHHHHHh---h-C-----
Confidence 4579999999999997 67677650 467765 78999988761 1 0
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPT 119 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~ 119 (598)
.+....+|+++.+++ .|+|+||+|+..
T Consensus 51 -----------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 79 (352)
T 3kux_A 51 -----------PAIPVVSDPQMLFNDPSIDLIVIPTPNDT 79 (352)
T ss_dssp -----------SSCCEESCHHHHHHCSSCCEEEECSCTTT
T ss_pred -----------CCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 123567889888875 899999987654
No 226
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.53 E-value=0.00026 Score=73.38 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=71.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|..++..|+. .+...+|.+||+++++.+.+.+.
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~-------------------------~~~~~~V~v~~r~~~~a~~la~~---------- 169 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRR-------------------------VFDIGEVKAYDVREKAAKKFVSY---------- 169 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-------------------------HSCCCEEEEECSSHHHHHHHHHH----------
T ss_pred CCEEEEEcCcHHHHHHHHHHHH-------------------------hCCccEEEEECCCHHHHHHHHHH----------
Confidence 4689999999999999999887 11357899999999999887642
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+... ..... ..++++++ ++|+|++|+|.... -+ . .+.+++++.|+..++..|+.
T Consensus 170 --~~~~-~~~~~-~~~~~e~v-~aDvVi~aTp~~~p----------v~---~------~~~l~~G~~V~~ig~~~p~~ 223 (322)
T 1omo_A 170 --CEDR-GISAS-VQPAEEAS-RCDVLVTTTPSRKP----------VV---K------AEWVEEGTHINAIGADGPGK 223 (322)
T ss_dssp --HHHT-TCCEE-ECCHHHHT-SSSEEEECCCCSSC----------CB---C------GGGCCTTCEEEECSCCSTTC
T ss_pred --HHhc-CceEE-ECCHHHHh-CCCEEEEeeCCCCc----------ee---c------HHHcCCCeEEEECCCCCCCc
Confidence 0000 01245 67888899 99999999875321 01 0 13578999999998887764
No 227
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.52 E-value=8.9e-05 Score=77.33 Aligned_cols=103 Identities=12% Similarity=0.183 Sum_probs=65.7
Q ss_pred CceEEEECCChhHHHHHHH-HHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSV-IALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.||..+... +.. +..+++|+ ++|+++++.+...+-
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~-------------------------~~~~~~l~av~d~~~~~~~~~~~~-------- 48 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLN-------------------------RKDSWHVAHIFRRHAKPEEQAPIY-------- 48 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTT-------------------------CTTTEEEEEEECSSCCGGGGSGGG--------
T ss_pred ceEEEEEecCHHHHHHHHHHHHh-------------------------cCCCeEEEEEEcCCHhHHHHHHhc--------
Confidence 4799999999999864333 322 11577877 789987765322210
Q ss_pred hHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec--CC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS--TV 158 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S--Tv 158 (598)
.+....+|+++.+++ .|+|+||+|+... . +.+...+..|+-|+.+- +.
T Consensus 49 ----------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h--------------~----~~~~~al~aGk~Vl~EKP~a~ 100 (345)
T 3f4l_A 49 ----------SHIHFTSDLDEVLNDPDVKLVVVCTHADSH--------------F----EYAKRALEAGKNVLVEKPFTP 100 (345)
T ss_dssp ----------TTCEEESCTHHHHTCTTEEEEEECSCGGGH--------------H----HHHHHHHHTTCEEEECSSSCS
T ss_pred ----------CCCceECCHHHHhcCCCCCEEEEcCChHHH--------------H----HHHHHHHHcCCcEEEeCCCCC
Confidence 234677889888876 8999999876532 1 22334455677777766 34
Q ss_pred chHHHHHHHH
Q psy11160 159 PVRAAESIMN 168 (598)
Q Consensus 159 ~~~~~~~~~~ 168 (598)
.+..++++..
T Consensus 101 ~~~e~~~l~~ 110 (345)
T 3f4l_A 101 TLAQAKELFA 110 (345)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5555555544
No 228
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.52 E-value=0.00058 Score=70.11 Aligned_cols=89 Identities=12% Similarity=0.261 Sum_probs=55.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.+|..++..|.+. .+++++ ++|+++++.+. .|. +
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~--------------------------~~~elvav~d~~~~~~~~--~g~-~------ 53 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREA--------------------------PDFEIAGIVRRNPAEVPF--ELQ-P------ 53 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--------------------------TTEEEEEEECC---------CCT-T------
T ss_pred CCEEEEECChHHHHHHHHHHhcC--------------------------CCCEEEEEEcCCHHHHHH--cCC-C------
Confidence 46999999999999999988871 567887 68999887654 121 0
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.....++.+. .++|+||+|+|... -.+.+.+.+..++-|+.+++.
T Consensus 54 -----------~~~~~~l~~~-~~~DvViiatp~~~------------------h~~~~~~al~aG~~Vi~ekP~ 98 (304)
T 3bio_A 54 -----------FRVVSDIEQL-ESVDVALVCSPSRE------------------VERTALEILKKGICTADSFDI 98 (304)
T ss_dssp -----------SCEESSGGGS-SSCCEEEECSCHHH------------------HHHHHHHHHTTTCEEEECCCC
T ss_pred -----------cCCHHHHHhC-CCCCEEEECCCchh------------------hHHHHHHHHHcCCeEEECCCC
Confidence 1123444433 78999999976432 123334556678888877654
No 229
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.51 E-value=0.00022 Score=73.98 Aligned_cols=74 Identities=11% Similarity=0.183 Sum_probs=53.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCce-EEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQ-VTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.+|..++..|.. .| +.+++ |.++|+++++.+.+.+..
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~-~~-----------------------~~~~~l~av~d~~~~~a~~~a~~~-------- 49 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQT-LP-----------------------RSEHQVVAVAARDLSRAKEFAQKH-------- 49 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT-SC-----------------------TTTEEEEEEECSSHHHHHHHHHHH--------
T ss_pred ccEEEEECchHHHHHHHHHHHh-CC-----------------------CCCeEEEEEEcCCHHHHHHHHHHc--------
Confidence 4699999999999999888876 00 01245 456899999988876420
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+--+..+|+++.++ +.|+|+||+|+..
T Consensus 50 ---------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 50 ---------DIPKAYGSYEELAKDPNVEVAYVGTQHPQ 78 (334)
T ss_dssp ---------TCSCEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred ---------CCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 00135688888887 6899999987653
No 230
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.51 E-value=0.0004 Score=72.80 Aligned_cols=73 Identities=10% Similarity=0.210 Sum_probs=51.8
Q ss_pred CCCCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~ 78 (598)
|..+++||+|||+|.+|.. .+..+.. . .+++|+ ++|+++++....-
T Consensus 1 M~m~~~rvgiiG~G~~g~~~~~~~l~~-------------------------~-~~~~l~av~d~~~~~~~~~~------ 48 (358)
T 3gdo_A 1 MSLDTIKVGILGYGLSGSVFHGPLLDV-------------------------L-DEYQISKIMTSRTEEVKRDF------ 48 (358)
T ss_dssp -CTTCEEEEEECCSHHHHHTTHHHHTT-------------------------C-TTEEEEEEECSCHHHHHHHC------
T ss_pred CCCCcceEEEEccCHHHHHHHHHHHhh-------------------------C-CCeEEEEEEcCCHHHHHhhC------
Confidence 4334579999999999997 5666655 0 467765 6799987743211
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
......+|+++.++ +.|+|+||+|+..
T Consensus 49 --------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 49 --------------PDAEVVHELEEITNDPAIELVIVTTPSGL 77 (358)
T ss_dssp --------------TTSEEESSTHHHHTCTTCCEEEECSCTTT
T ss_pred --------------CCCceECCHHHHhcCCCCCEEEEcCCcHH
Confidence 12456788988887 6899999987754
No 231
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.47 E-value=0.00023 Score=65.01 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=35.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC-HHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS-EERIRQWN 72 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~-~~~~~~~~ 72 (598)
++|.|+|+|.+|..++..|.+ .|++|+++|++ +++.+.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~---------------------------~g~~V~vid~~~~~~~~~~~ 44 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQ---------------------------RGQNVTVISNLPEDDIKQLE 44 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECCCHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHH---------------------------CCCCEEEEECCChHHHHHHH
Confidence 589999999999999999999 89999999998 56665554
No 232
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.46 E-value=0.00024 Score=76.33 Aligned_cols=72 Identities=15% Similarity=0.302 Sum_probs=54.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCC--CCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIY--EPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~--e~~ 82 (598)
.++|.|+|+|.+|..+|..|.. .|++|+++|.|+++++.+.+...++. ++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~---------------------------~g~~vvvId~d~~~v~~~~~~g~~vi~GDat 56 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS---------------------------SGVKMVVLDHDPDHIETLRKFGMKVFYGDAT 56 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECCHHHHHHHHHTTCCCEESCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHH---------------------------CCCCEEEEECCHHHHHHHHhCCCeEEEcCCC
Confidence 4789999999999999999999 89999999999999999875333322 111
Q ss_pred hHHHHhhhcCCceEEecCHHHH-hccCcEEEEecCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSA-IQKAQLIFISVNT 117 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-~~~adviii~v~t 117 (598)
-.+. +.++ +.+||+||++++.
T Consensus 57 ~~~~--------------L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 57 RMDL--------------LESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CHHH--------------HHHTTTTTCSEEEECCSS
T ss_pred CHHH--------------HHhcCCCccCEEEECCCC
Confidence 1111 2222 6789999999754
No 233
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.46 E-value=0.00043 Score=74.27 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=67.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|.++|..|.. .|.+|+++|+++.+.......
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka---------------------------~Ga~Viv~D~~p~~a~~A~~~---------- 253 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRG---------------------------FGARVVVTEVDPINALQAAME---------- 253 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHT----------
T ss_pred CCEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEECCChhhhHHHHHh----------
Confidence 3689999999999999999998 789999999999776544321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
+.. ..++++++++||+|+++.++..- .+ +...+.++++.+|++.+-..
T Consensus 254 ---------G~~-~~sL~eal~~ADVVilt~gt~~i---------I~--------~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 254 ---------GYQ-VLLVEDVVEEAHIFVTTTGNDDI---------IT--------SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp ---------TCE-ECCHHHHTTTCSEEEECSSCSCS---------BC--------TTTGGGCCTTEEEEECSSSG
T ss_pred ---------CCe-ecCHHHHHhhCCEEEECCCCcCc---------cC--------HHHHhhcCCCcEEEEeCCCC
Confidence 122 24788899999999987654321 11 12345678999999877443
No 234
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.44 E-value=0.00015 Score=74.93 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=69.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|||+|.+|..++..|... +...+|.+||++ +.+.+.+.
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~-------------------------~~~~~V~v~~r~--~a~~la~~---------- 163 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSAR-------------------------FALEAILVHDPY--ASPEILER---------- 163 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-------------------------SCCCEEEEECTT--CCHHHHHH----------
T ss_pred CcEEEEECccHHHHHHHHHHHHh-------------------------CCCcEEEEECCc--HHHHHHHH----------
Confidence 46899999999999999999871 135799999999 44444321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+....+...... ++++++++||+||.|+|.+. +-+ . .+.++++++|+..++..|+.
T Consensus 164 --l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~----------pvl---~------~~~l~~G~~V~~vGs~~p~~ 219 (313)
T 3hdj_A 164 --IGRRCGVPARMA-APADIAAQADIVVTATRSTT----------PLF---A------GQALRAGAFVGAIGSSLPHT 219 (313)
T ss_dssp --HHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS----------CSS---C------GGGCCTTCEEEECCCSSTTC
T ss_pred --HHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC----------ccc---C------HHHcCCCcEEEECCCCCCch
Confidence 000001234556 89999999999999976532 111 0 24678999999998887765
No 235
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.43 E-value=0.00073 Score=69.69 Aligned_cols=121 Identities=21% Similarity=0.263 Sum_probs=74.4
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC--ceEEEEeC--CHHHHHH----HHcCCC
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN--IQVTVVDK--SEERIRQ----WNSNKL 76 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~~d~--~~~~~~~----~~~~~~ 76 (598)
|||+|+|+ |.+|.+++..|+. .| .++.++|+ ++++.+. +....
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~---------------------------~~~~~el~L~Di~~~~~~~~~~~~dl~~~~- 52 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAK---------------------------EPFMKDLVLIGREHSINKLEGLREDIYDAL- 52 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT---------------------------CTTCCEEEEEECGGGHHHHHHHHHHHHHHH-
T ss_pred CEEEEECCCChhHHHHHHHHHh---------------------------CCCCCEEEEEcCCCchhhhHHHHHHHHHhH-
Confidence 59999999 9999999999988 44 47999999 8766543 22210
Q ss_pred CCCCCChHHHHhhhcCCceEEecC-HHHHhccCcEEEEecCCCCCCCCCCC-CCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 77 PIYEPGLDEVVKKTRDVNLFFSTD-IKSAIQKAQLIFISVNTPTKTFGNGK-GRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 77 ~~~e~~~~~~~~~~~~~~~~~~~~-~~~~~~~adviii~v~tp~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
++.. ....++.++| ..+++++||+||++...|..+...+. ....+...+++.++.+.++. +.+|++
T Consensus 53 ~~~~----------~~~~i~~~~d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv 120 (313)
T 1hye_A 53 AGTR----------SDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV 120 (313)
T ss_dssp TTSC----------CCCEEEEEETTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE
T ss_pred HhcC----------CCeEEEeCCcchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE
Confidence 1100 0123444443 46689999999999877654321100 01123445566666676665 444444
Q ss_pred ecCCchHHHHHHH
Q psy11160 155 KSTVPVRAAESIM 167 (598)
Q Consensus 155 ~STv~~~~~~~~~ 167 (598)
+|-|.+..-.++
T Consensus 121 -~SNPv~~~t~~~ 132 (313)
T 1hye_A 121 -ITNPVDVMTYKA 132 (313)
T ss_dssp -CSSSHHHHHHHH
T ss_pred -ecCcHHHHHHHH
Confidence 567777764444
No 236
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.37 E-value=9.8e-05 Score=77.77 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=53.2
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+.|||.|+|+|+||..+|..|++ .++|+++|++.++++.+++...++.-
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~----------------------------~~~v~~~~~~~~~~~~~~~~~~~~~~--- 63 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD----------------------------EFDVYIGDVNNENLEKVKEFATPLKV--- 63 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT----------------------------TSEEEEEESCHHHHHHHTTTSEEEEC---
T ss_pred CccEEEEECCCHHHHHHHHHHhc----------------------------CCCeEEEEcCHHHHHHHhccCCcEEE---
Confidence 35899999999999999998876 47999999999999988754221100
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
...-..++.+.++++|+||.|+|.
T Consensus 64 ----------d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 64 ----------DASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp ----------CTTCHHHHHHHHTTCSEEEECCCG
T ss_pred ----------ecCCHHHHHHHHhCCCEEEEecCC
Confidence 000012345678999999999864
No 237
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.35 E-value=0.0026 Score=68.64 Aligned_cols=77 Identities=16% Similarity=0.183 Sum_probs=53.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+||+|||+|.||...+..|.. . .+.+| .++|+++++.+.+.+.
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~-------------------------~-~~~~lvav~d~~~~~~~~~a~~--------- 64 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMAR-------------------------R-DDVEIVAFADPDPYMVGRAQEI--------- 64 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-------------------------C-TTEEEEEEECSCHHHHHHHHHH---------
T ss_pred CceEEEEecCHHHHHHHHHHHh-------------------------C-CCcEEEEEEeCCHHHHHHHHHH---------
Confidence 4699999999999998888876 1 46776 4789999998876531
Q ss_pred HHHHhhhcCCceEEec----CHHHHhc--cCcEEEEecCCCC
Q psy11160 84 DEVVKKTRDVNLFFST----DIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~----~~~~~~~--~adviii~v~tp~ 119 (598)
+.+.--......+ |+++.++ +.|+|+||+|+..
T Consensus 65 ---~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 103 (444)
T 2ixa_A 65 ---LKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEW 103 (444)
T ss_dssp ---HHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCCGGG
T ss_pred ---HHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCCcHH
Confidence 0000000124455 8888887 5899999987653
No 238
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.32 E-value=0.00038 Score=71.36 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=70.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++|.|||+|.+|.+++..|++ .|. +|++++|++++.+.+.+......
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~---------------------------~G~~~V~v~nR~~~ka~~la~~~~~~~---- 189 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLS---------------------------TAAERIDMANRTVEKAERLVREGDERR---- 189 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TTCSEEEEECSSHHHHHHHHHHSCSSS----
T ss_pred CCEEEEECcHHHHHHHHHHHHH---------------------------CCCCEEEEEeCCHHHHHHHHHHhhhcc----
Confidence 4689999999999999999999 787 99999999999988764210000
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.......++.+++.++|+||.|+|.+..+.. ....+. ...++++.+|++.++.|..|
T Consensus 190 ---------~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~----~~~~i~---------~~~l~~~~~v~D~~y~P~~T 246 (297)
T 2egg_A 190 ---------SAYFSLAEAETRLAEYDIIINTTSVGMHPRV----EVQPLS---------LERLRPGVIVSDIIYNPLET 246 (297)
T ss_dssp ---------CCEECHHHHHHTGGGCSEEEECSCTTCSSCC----SCCSSC---------CTTCCTTCEEEECCCSSSSC
T ss_pred ---------CceeeHHHHHhhhccCCEEEECCCCCCCCCC----CCCCCC---------HHHcCCCCEEEEcCCCCCCC
Confidence 0011112455677899999999877643210 000000 12367899999999975544
No 239
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.31 E-value=0.0005 Score=72.84 Aligned_cols=71 Identities=11% Similarity=0.171 Sum_probs=54.3
Q ss_pred CceEEEECCC-hhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAG-YVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G-~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+| .+|..++..|... .+.+++ ++|+++++.+.+.+.
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~~~a~~-------- 47 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH--------------------------PDAQIVAACDPNEDVRERFGKE-------- 47 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC--------------------------TTEEEEEEECSCHHHHHHHHHH--------
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC--------------------------CCeEEEEEEeCCHHHHHHHHHH--------
Confidence 4799999999 9999999888871 466665 689999998876531
Q ss_pred hHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~ 119 (598)
-++...+|+++.+++ .|+|+||+|+..
T Consensus 48 ----------~g~~~~~~~~ell~~~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 48 ----------YGIPVFATLAEMMQHVQMDAVYIASPHQF 76 (387)
T ss_dssp ----------HTCCEESSHHHHHHHSCCSEEEECSCGGG
T ss_pred ----------cCCCeECCHHHHHcCCCCCEEEEcCCcHH
Confidence 023356888888874 899999987643
No 240
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.30 E-value=0.0021 Score=69.04 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=52.7
Q ss_pred CceEEEECCChhHHHHH--HHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTC--SVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a--~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.+ .+.+ ..|+...+.+ ++.+|+++|+++++++....
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l----------------------~~~el~L~Di~~~~~~~~~~--------- 49 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDV----------------------RIDEVIFYDIDEEKQKIVVD--------- 49 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTS----------------------CCCEEEEECSCHHHHHHHHH---------
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCC----------------------CcCEEEEEeCCHHHHHHHHH---------
Confidence 479999999997 3322 2333300011 36799999999999775331
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~ 119 (598)
+...+.... .+++.++|+.+++++||+||++...+.
T Consensus 50 ~~~~~~~~~-~~v~~t~d~~~al~~AD~Viitagvg~ 85 (417)
T 1up7_A 50 FVKRLVKDR-FKVLISDTFEGAVVDAKYVIFQFRPGG 85 (417)
T ss_dssp HHHHHHTTS-SEEEECSSHHHHHTTCSEEEECCCTTH
T ss_pred HHHHHhhCC-eEEEEeCCHHHHhCCCCEEEEcCCCCC
Confidence 111111111 357778898889999999999986653
No 241
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.30 E-value=0.0028 Score=69.13 Aligned_cols=82 Identities=21% Similarity=0.204 Sum_probs=54.4
Q ss_pred ceEEEECCChhHHHHHH--HHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPTCS--VIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~--~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|||+|||+|.+|.+... .++. .+. +.+.+.+|+++|+++++++.... .+
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~-~~~--------------------l~~~~~ei~L~Di~~~rl~~~~~--------~~ 51 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQ-TDE--------------------LSREDTHIYLMDVHERRLNASYI--------LA 51 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-CTT--------------------TCSTTCEEEEECSCHHHHHHHHH--------HH
T ss_pred CEEEEECCCchhhHHHHHHHHHh-hHh--------------------cCCCCCEEEEECCCHHHHHHHHH--------HH
Confidence 69999999999876432 2443 111 11134589999999998875331 01
Q ss_pred HHHHhhh-cCCceEEecCHHHHhccCcEEEEecC
Q psy11160 84 DEVVKKT-RDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
..+.... .+.++..|+|+++|+++||+||+++.
T Consensus 52 ~~~~~~~~~~~~i~~t~d~~eAl~gAD~Vi~~~g 85 (477)
T 3u95_A 52 RKYVEELNSPVKVVKTESLDEAIEGADFIINTAY 85 (477)
T ss_dssp HHHHHHHTCCCEEEEESCHHHHHTTCSEEEECCC
T ss_pred HHHHHHcCCCeEEEEeCCHHHHhCCCCEEEECcc
Confidence 1122221 23468889999999999999999974
No 242
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.24 E-value=0.00076 Score=71.42 Aligned_cols=100 Identities=20% Similarity=0.268 Sum_probs=68.5
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~~ 83 (598)
..+|+|||+|.+|..+|..+.. .|.+|+++|+++++.+.+.+ ....+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~---------------------------~Ga~V~~~d~~~~~l~~~~~~~g~~~~---- 216 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANG---------------------------MGATVTVLDINIDKLRQLDAEFCGRIH---- 216 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHHHHTTTSSE----
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEeCCHHHHHHHHHhcCCeeE----
Confidence 3689999999999999999988 78899999999999887764 211100
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
....-..++.+.++.+|+||.|++.|... .+.+ +.+...+.++++.++|+.|
T Consensus 217 ---------~~~~~~~~l~~~l~~aDvVi~~~~~p~~~-------t~~l-----i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 217 ---------TRYSSAYELEGAVKRADLVIGAVLVPGAK-------APKL-----VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp ---------EEECCHHHHHHHHHHCSEEEECCCCTTSC-------CCCC-----BCHHHHTTSCTTCEEEEGG
T ss_pred ---------eccCCHHHHHHHHcCCCEEEECCCcCCCC-------Ccce-----ecHHHHhcCCCCcEEEEEe
Confidence 00000123556778999999998776421 0111 1234456678899998876
No 243
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.23 E-value=0.0004 Score=69.63 Aligned_cols=92 Identities=14% Similarity=0.211 Sum_probs=65.6
Q ss_pred eEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 7 HICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 7 ~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
+|+|||+|-+|.+++..|++ .|. +|++++|++++.+.+.+..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~---------------------------~G~~~I~v~nR~~~ka~~la~~~---------- 152 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ---------------------------MGVKDIWVVNRTIERAKALDFPV---------- 152 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH---------------------------TTCCCEEEEESCHHHHHTCCSSC----------
T ss_pred eEEEECcHHHHHHHHHHHHH---------------------------cCCCEEEEEeCCHHHHHHHHHHc----------
Confidence 89999999999999999999 787 9999999999988765321
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
+.....+..++++++|+||.|+|....++. ..+. ...++++++|++....
T Consensus 153 --------~~~~~~~~~~~~~~aDiVInatp~gm~p~~------~~i~---------~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 153 --------KIFSLDQLDEVVKKAKSLFNTTSVGMKGEE------LPVS---------DDSLKNLSLVYDVIYF 202 (253)
T ss_dssp --------EEEEGGGHHHHHHTCSEEEECSSTTTTSCC------CSCC---------HHHHTTCSEEEECSSS
T ss_pred --------ccCCHHHHHhhhcCCCEEEECCCCCCCCCC------CCCC---------HHHhCcCCEEEEeeCC
Confidence 112234566778999999999875432210 1110 1234678888876655
No 244
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.23 E-value=0.00067 Score=68.73 Aligned_cols=166 Identities=12% Similarity=0.105 Sum_probs=94.7
Q ss_pred CCCCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~ 78 (598)
|-.+.|||+|+|+ |.||..++..+... .|++++ ++|+++++.. +...-
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~--------------------------~~~elva~~d~~~~~~~----g~d~~ 50 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALAL--------------------------EGVQLGAALEREGSSLL----GSDAG 50 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHS--------------------------TTEECCCEECCTTCTTC----SCCTT
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhC--------------------------CCCEEEEEEecCchhhh----hhhHH
Confidence 4445689999999 99999999988761 678877 6787653321 10000
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
..-++. ..++..++|++++++++|+||-++ +|. ...+.+...+..+.-+|..+|
T Consensus 51 ~~~g~~-------~~~v~~~~dl~~~l~~~DvVIDft-~p~-----------------~~~~~~~~a~~~G~~vVigTt- 104 (273)
T 1dih_A 51 ELAGAG-------KTGVTVQSSLDAVKDDFDVFIDFT-RPE-----------------GTLNHLAFCRQHGKGMVIGTT- 104 (273)
T ss_dssp CSSSSS-------CCSCCEESCSTTTTTSCSEEEECS-CHH-----------------HHHHHHHHHHHTTCEEEECCC-
T ss_pred HHcCCC-------cCCceecCCHHHHhcCCCEEEEcC-ChH-----------------HHHHHHHHHHhCCCCEEEECC-
Confidence 000000 013445677877788999999564 231 122333344456666777666
Q ss_pred chHHHHHHHHHHhhccCCcccccCCCCCch----HHHHHHHHHHHHhcCC-ceEEEec------cccchhhhhHHHHHh
Q psy11160 159 PVRAAESIMNVLKANHKTNVQFQGRAADLK----YVEAAARMIAEIATDN-KIVVEKS------TVPVRAAESIMNVLK 226 (598)
Q Consensus 159 ~~~~~~~~~~~l~~~~~~~~~~~~~~~dl~----~l~~A~~~Ia~~l~~~-~lvv~eS------TvP~gtt~~~~~~L~ 226 (598)
|.+.+-...+...++..+.. ..+++| .+-...+..++.+.++ ++-|+|+ -.|-||.-.+.+.+.
T Consensus 105 --G~~~e~~~~L~~~a~~~~vv--~a~N~siGvn~~~~l~~~aa~~~~~~~dieiiE~Hh~~K~DaPSGTA~~~ae~i~ 179 (273)
T 1dih_A 105 --GFDEAGKQAIRDAAADIAIV--FAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIA 179 (273)
T ss_dssp --CCCHHHHHHHHHHTTTSCEE--ECSCCCHHHHHHHHHHHHHHHHHTTTSEEEEEEEECTTCCSSSCHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHhcCCCCEE--EEecCcHHHHHHHHHHHHHHHhcCCCCCEEEEEeecCCCCCCCCHHHHHHHHHHH
Confidence 22222233344444444422 123222 3566667777777644 7777776 368899877666553
No 245
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.23 E-value=0.00048 Score=65.86 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=64.3
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||.|+|+ |++|..++..|++ .|++|++++|++++.+.+..+. .+..-++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~~~~~~~~-~~~~~D~~ 52 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKN---------------------------RGHEVTAIVRNAGKITQTHKDI-NILQKDIF 52 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCSHHHHHHCSSS-EEEECCGG
T ss_pred CeEEEEcCCchhHHHHHHHHHh---------------------------CCCEEEEEEcCchhhhhccCCC-eEEecccc
Confidence 58999995 9999999999999 8999999999998887764221 11111110
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
- .+. +++.++|+||.+.+.+... ...++.....+++...+ .....+|+.+|+.
T Consensus 53 ------------d-~~~-~~~~~~d~vi~~ag~~~~~------~~~~~~~~~~l~~a~~~-~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 53 ------------D-LTL-SDLSDQNVVVDAYGISPDE------AEKHVTSLDHLISVLNG-TVSPRLLVVGGAA 105 (221)
T ss_dssp ------------G-CCH-HHHTTCSEEEECCCSSTTT------TTSHHHHHHHHHHHHCS-CCSSEEEEECCCC
T ss_pred ------------C-hhh-hhhcCCCEEEECCcCCccc------cchHHHHHHHHHHHHHh-cCCceEEEEecce
Confidence 0 011 5788999999998664321 12233333333332221 1234667776654
No 246
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.21 E-value=0.00056 Score=72.72 Aligned_cols=74 Identities=14% Similarity=0.052 Sum_probs=53.3
Q ss_pred CceEEEECCCh---hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE--EEeCCHHHHHHHHcCCCCCC
Q psy11160 5 ISHICCIGAGY---VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT--VVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 5 ~~~I~viG~G~---vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~--~~d~~~~~~~~~~~~~~~~~ 79 (598)
..||+|||+|. ||...+..+... .+++++ ++|+++++.+.+.+...
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~--------------------------~~~~lva~v~d~~~~~a~~~a~~~g--- 62 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD--------------------------NTFVLVAGAFDIDPIRGSAFGEQLG--- 62 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG--------------------------GSEEEEEEECCSSHHHHHHHHHHTT---
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC--------------------------CCeEEEEEEeCCCHHHHHHHHHHhC---
Confidence 36899999999 999988887761 347776 47999999988764210
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhcc-------CcEEEEecCCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQK-------AQLIFISVNTPT 119 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~~-------adviii~v~tp~ 119 (598)
+ ...+..+|+++.+++ .|+|+||+|+..
T Consensus 63 ---~---------~~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~ 97 (398)
T 3dty_A 63 ---V---------DSERCYADYLSMFEQEARRADGIQAVSIATPNGT 97 (398)
T ss_dssp ---C---------CGGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGG
T ss_pred ---C---------CcceeeCCHHHHHhcccccCCCCCEEEECCCcHH
Confidence 0 001345778877764 899999987654
No 247
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.21 E-value=0.00054 Score=71.98 Aligned_cols=70 Identities=6% Similarity=0.046 Sum_probs=52.6
Q ss_pred CceEEEECCChhHH-HHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGG-PTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~-~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+.||+|||+|.+|. .++..+.. .+.+|+ ++|+++++.+.+.+..
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---------------------------~~~~lvav~d~~~~~a~~~a~~~------- 71 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---------------------------AGARLAGFHEKDDALAAEFSAVY------- 71 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---------------------------TTCEEEEEECSCHHHHHHHHHHS-------
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---------------------------CCcEEEEEEcCCHHHHHHHHHHc-------
Confidence 36899999999995 56666666 677754 6899999998876421
Q ss_pred hHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTP 118 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp 118 (598)
+.....+|+++.+++ .|+|+||+|+.
T Consensus 72 ----------~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 72 ----------ADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp ----------SSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred ----------CCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 113467889888875 89999997654
No 248
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.21 E-value=0.0019 Score=69.36 Aligned_cols=90 Identities=14% Similarity=0.063 Sum_probs=66.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++++|||+|.+|..+|..+.. .|.+|+++|+++.+.......
T Consensus 247 GKTVgVIG~G~IGr~vA~~lra---------------------------fGa~Viv~d~dp~~a~~A~~~---------- 289 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAG---------------------------AGARVKVTEVDPICALQAAMD---------- 289 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHHT----------
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEEeCCcchhhHHHhc----------
Confidence 3689999999999999999988 789999999998765443211
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
+... .+++++++.||+|+.+++++- ..+ +...+.++++.++++.+-.
T Consensus 290 ---------G~~v-v~LeElL~~ADIVv~atgt~~---------lI~--------~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 290 ---------GFEV-VTLDDAASTADIVVTTTGNKD---------VIT--------IDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp ---------TCEE-CCHHHHGGGCSEEEECCSSSS---------SBC--------HHHHHHSCTTEEEEECSSS
T ss_pred ---------Ccee-ccHHHHHhhCCEEEECCCCcc---------ccC--------HHHHhcCCCCeEEEEcCCC
Confidence 1222 467889999999998865431 111 2345678999999986554
No 249
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.20 E-value=0.00036 Score=73.22 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=51.0
Q ss_pred CCCCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~ 78 (598)
|..+++||+|||+|.+|.. .+..+... .+.+|+ ++|++++++. +. .
T Consensus 1 M~~~~~rvgiiG~G~~g~~~~~~~l~~~--------------------------~~~~l~av~d~~~~~~~---~~-~-- 48 (362)
T 3fhl_A 1 MSLEIIKTGLAAFGMSGQVFHAPFISTN--------------------------PHFELYKIVERSKELSK---ER-Y-- 48 (362)
T ss_dssp --CCCEEEEESCCSHHHHHTTHHHHHHC--------------------------TTEEEEEEECSSCCGGG---TT-C--
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHhhC--------------------------CCeEEEEEEcCCHHHHH---Hh-C--
Confidence 5555679999999999997 67677661 467765 6788876521 11 0
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPT 119 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~ 119 (598)
......+|+++.+++ .|+|+||+|+..
T Consensus 49 --------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (362)
T 3fhl_A 49 --------------PQASIVRSFKELTEDPEIDLIVVNTPDNT 77 (362)
T ss_dssp --------------TTSEEESCSHHHHTCTTCCEEEECSCGGG
T ss_pred --------------CCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 134567889888876 899999987653
No 250
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.20 E-value=0.00054 Score=73.89 Aligned_cols=76 Identities=9% Similarity=0.081 Sum_probs=53.3
Q ss_pred CceEEEECCChhHH-HHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGG-PTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~-~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.||. .++..|... .++++ .++|+++++.+.+.+... +.
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~--------------------------~~~~lvav~d~~~~~~~~~a~~~g-~~--- 132 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGC--------------------------QHSRIEALVSGNAEKAKIVAAEYG-VD--- 132 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTC--------------------------SSEEEEEEECSCHHHHHHHHHHTT-CC---
T ss_pred ceEEEEECCcHHHHHHHHHHHhhC--------------------------CCcEEEEEEcCCHHHHHHHHHHhC-CC---
Confidence 46999999999997 888877660 35675 588999999887654210 00
Q ss_pred hHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
.......+|+++.++ ++|+|+||+|+..
T Consensus 133 ---------~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 133 ---------PRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp ---------GGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ---------cccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 011345677887776 6899999987643
No 251
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.18 E-value=0.0012 Score=68.53 Aligned_cols=74 Identities=5% Similarity=0.060 Sum_probs=54.7
Q ss_pred CCceEEEECCC-hhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGAG-YVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~G-~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+..||+|||+| .+|...+..|.. .+.+.++ .++|+++++.+.+.+..
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~-------------------------~~~~~~lvav~d~~~~~~~~~a~~~------ 65 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKN-------------------------LSHLFEITAVTSRTRSHAEEFAKMV------ 65 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHT-------------------------TTTTEEEEEEECSSHHHHHHHHHHH------
T ss_pred CceeEEEEecCHHHHHHHHHHHHh-------------------------CCCceEEEEEEcCCHHHHHHHHHHh------
Confidence 35689999999 899999888877 1124665 57899999998766420
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+.....+|+++.++ +.|+|+||+|+..
T Consensus 66 -----------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 94 (340)
T 1zh8_A 66 -----------GNPAVFDSYEELLESGLVDAVDLTLPVEL 94 (340)
T ss_dssp -----------SSCEEESCHHHHHHSSCCSEEEECCCGGG
T ss_pred -----------CCCcccCCHHHHhcCCCCCEEEEeCCchH
Confidence 11256788988886 5899999976643
No 252
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.17 E-value=0.00024 Score=69.71 Aligned_cols=40 Identities=8% Similarity=0.040 Sum_probs=36.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
.++|.|+|+|.+|..+|..|.+ .|+ |+++|+++++++.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~---------------------------~g~-v~vid~~~~~~~~~~ 48 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRG---------------------------SEV-FVLAEDENVRKKVLR 48 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTT---------------------------SEE-EEEESCGGGHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHh---------------------------CCe-EEEEECCHHHHHHHh
Confidence 4789999999999999999988 789 999999999998876
No 253
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.16 E-value=0.00018 Score=69.42 Aligned_cols=112 Identities=15% Similarity=0.171 Sum_probs=63.8
Q ss_pred CCCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 2 VQTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 2 ~~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
|+++|+|.|.|+ |++|..++..|.+ .|++|+++++++++.+.+..+. .+.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~~~~~~~~-~~~- 51 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALN---------------------------RGFEVTAVVRHPEKIKIENEHL-KVK- 51 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHT---------------------------TTCEEEEECSCGGGCCCCCTTE-EEE-
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHH---------------------------CCCEEEEEEcCcccchhccCce-EEE-
Confidence 345689999995 9999999999999 8999999999977653221110 000
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
...+.-..+..++++++|+||.+.+...... .....++.....+++.+.+. ....+|..+|+
T Consensus 52 -----------~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~---~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 113 (227)
T 3dhn_A 52 -----------KADVSSLDEVCEVCKGADAVISAFNPGWNNP---DIYDETIKVYLTIIDGVKKA-GVNRFLMVGGA 113 (227)
T ss_dssp -----------CCCTTCHHHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCS
T ss_pred -----------EecCCCHHHHHHHhcCCCEEEEeCcCCCCCh---hHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCh
Confidence 0111111234567889999999875432110 01222444455555544432 23355555544
No 254
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.14 E-value=0.00062 Score=68.09 Aligned_cols=42 Identities=10% Similarity=0.245 Sum_probs=38.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
+|||.|.|+|++|..++..|.+ .|++|+++++++++.+.+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~~~~~~ 46 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAP---------------------------QGWRIIGTSRNPDQMEAIRA 46 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGG---------------------------GTCEEEEEESCGGGHHHHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHH---------------------------CCCEEEEEEcChhhhhhHhh
Confidence 4799999999999999999999 79999999999988877654
No 255
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.14 E-value=0.00047 Score=74.42 Aligned_cols=74 Identities=12% Similarity=0.099 Sum_probs=54.6
Q ss_pred CceEEEECC----ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCC
Q psy11160 5 ISHICCIGA----GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 5 ~~~I~viG~----G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~ 79 (598)
.+||+|||+ |.+|..++..|.. ...+++| .++|+++++.+.+.+... +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~-------------------------~~~~~~lvav~d~~~~~~~~~a~~~g-~- 72 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQ-------------------------LSSQFQITALYSPKIETSIATIQRLK-L- 72 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHH-------------------------TTTTEEEEEEECSSHHHHHHHHHHTT-C-
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHh-------------------------cCCCeEEEEEEeCCHHHHHHHHHHcC-C-
Confidence 468999999 9999999999988 1025675 578999999887664210 0
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
...+..+|+++.++ +.|+|+||+|+.
T Consensus 73 -------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 73 -------------SNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp -------------TTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred -------------CcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 11346788988886 589999997654
No 256
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.14 E-value=0.0029 Score=66.65 Aligned_cols=117 Identities=13% Similarity=0.158 Sum_probs=68.3
Q ss_pred CCCCCceEEEEC-CChhHHH-HH----HHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcC
Q psy11160 1 MVQTISHICCIG-AGYVGGP-TC----SVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSN 74 (598)
Q Consensus 1 m~~~~~~I~viG-~G~vG~~-~a----~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~ 74 (598)
|..+.+||+||| +|.||.. .+ ..+.. .+++.+. +.. . ...++.++|+++++.+.+.+.
T Consensus 2 ~~~~~irigiiG~~G~~g~~~h~~~~~~~~~~-~~~~~l~--~~~--------~-----~~~~~av~~~~~~~a~~~a~~ 65 (383)
T 3oqb_A 2 LTTQRLGLIMNGVTGRMGLNQHLIRSIVAIRD-QGGVRLK--NGD--------R-----IMPDPILVGRSAEKVEALAKR 65 (383)
T ss_dssp -CCEEEEEEEESTTSTHHHHTTTTTTHHHHHH-HTSEECT--TSC--------E-----EEEEEEEECSSSHHHHHHHHH
T ss_pred CCCceeEEEEEeccchhhhhhhHHHHHHHHhh-cCceeec--CCc--------c-----cceeeEEEcCCHHHHHHHHHH
Confidence 334457999999 9999997 66 66665 1111100 000 0 012335999999999887642
Q ss_pred CCCCCCCChHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEE
Q psy11160 75 KLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIV 152 (598)
Q Consensus 75 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iv 152 (598)
. +--..++|+++.+++ .|+|+||+|+... .+.+...+..|+-|
T Consensus 66 ~-----------------~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h------------------~~~~~~al~~Gk~V 110 (383)
T 3oqb_A 66 F-----------------NIARWTTDLDAALADKNDTMFFDAATTQAR------------------PGLLTQAINAGKHV 110 (383)
T ss_dssp T-----------------TCCCEESCHHHHHHCSSCCEEEECSCSSSS------------------HHHHHHHHTTTCEE
T ss_pred h-----------------CCCcccCCHHHHhcCCCCCEEEECCCchHH------------------HHHHHHHHHCCCeE
Confidence 1 001356888888865 8999999876543 12333445667766
Q ss_pred EEecC--CchHHHHHHHH
Q psy11160 153 VEKST--VPVRAAESIMN 168 (598)
Q Consensus 153 v~~ST--v~~~~~~~~~~ 168 (598)
+.+-. .....++++..
T Consensus 111 ~~EKP~a~~~~~~~~l~~ 128 (383)
T 3oqb_A 111 YCEKPIATNFEEALEVVK 128 (383)
T ss_dssp EECSCSCSSHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHH
Confidence 66543 34444444443
No 257
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.13 E-value=0.0026 Score=68.18 Aligned_cols=90 Identities=13% Similarity=0.150 Sum_probs=65.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++|+|+|+|.+|..+|..+.. .|.+|+++|+++.+.......
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra---------------------------~Ga~Viv~D~dp~ra~~A~~~---------- 262 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKA---------------------------MGSIVYVTEIDPICALQACMD---------- 262 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHT----------
T ss_pred CCEEEEEeeCHHHHHHHHHHHH---------------------------CCCEEEEEeCChhhhHHHHHc----------
Confidence 3689999999999999999988 788999999999765543321
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
+.. ..+++++++.||+|++|..++. ..+ +...+.++++.+|++.+--
T Consensus 263 ---------G~~-v~~Leeal~~ADIVi~atgt~~---------lI~--------~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 263 ---------GFR-LVKLNEVIRQVDIVITCTGNKN---------VVT--------REHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp ---------TCE-ECCHHHHTTTCSEEEECSSCSC---------SBC--------HHHHHHSCTTEEEEECSST
T ss_pred ---------CCE-eccHHHHHhcCCEEEECCCCcc---------cCC--------HHHHHhcCCCcEEEEecCC
Confidence 122 2467889999999999844331 111 2344568899999986654
No 258
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.13 E-value=0.0013 Score=70.51 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=51.8
Q ss_pred ceEEEECCCh---hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE--EEeCCHHHHHHHHcCC-CCCC
Q psy11160 6 SHICCIGAGY---VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT--VVDKSEERIRQWNSNK-LPIY 79 (598)
Q Consensus 6 ~~I~viG~G~---vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~--~~d~~~~~~~~~~~~~-~~~~ 79 (598)
+||+|||+|. +|...+..+... .+++++ ++|+++++.+.+.+.. .+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~--------------------------~~~~lva~v~d~~~~~a~~~a~~~g~~-- 89 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD--------------------------DHYELVAGALSSTPEKAEASGRELGLD-- 89 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT--------------------------SCEEEEEEECCSSHHHHHHHHHHHTCC--
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC--------------------------CCcEEEEEEeCCCHHHHHHHHHHcCCC--
Confidence 5899999998 999988887761 346775 5799999988776420 00
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhcc-------CcEEEEecCCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQK-------AQLIFISVNTPT 119 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~~-------adviii~v~tp~ 119 (598)
..+..+|+++.+++ .|+|+||+|+..
T Consensus 90 --------------~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~ 122 (417)
T 3v5n_A 90 --------------PSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHV 122 (417)
T ss_dssp --------------GGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTS
T ss_pred --------------cccccCCHHHHHhcccccCCCCcEEEECCCcHH
Confidence 01345778877765 899999987764
No 259
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.11 E-value=0.00095 Score=72.60 Aligned_cols=43 Identities=33% Similarity=0.528 Sum_probs=39.8
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
..|||.|+|+|.+|..+|..|.. .||+|+++|.|+++++.+.+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~---------------------------~~~~v~vId~d~~~~~~~~~ 44 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG---------------------------ENNDITIVDKDGDRLRELQD 44 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS---------------------------TTEEEEEEESCHHHHHHHHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHH---------------------------CCCCEEEEECCHHHHHHHHH
Confidence 35899999999999999999998 89999999999999998874
No 260
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.11 E-value=0.002 Score=64.05 Aligned_cols=144 Identities=13% Similarity=0.152 Sum_probs=88.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEE-EeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTV-VDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~-~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|+||+|+|+|.||..++..+.. .++++++ +|++++. .
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~---------------------------~~~eLva~~d~~~~~-----~---------- 40 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEE---------------------------KGHEIVGVIENTPKA-----T---------- 40 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEECSSCC-----------------
T ss_pred ceEEEEECcCHHHHHHHHHHHh---------------------------CCCEEEEEEecCccc-----c----------
Confidence 5899999999999999999988 4447665 7887542 0
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.+...++|+++.+ ++|++|-.. +|. .+. +.+ + +..+.-+|+.||- .+
T Consensus 41 ---------~gv~v~~dl~~l~-~~DVvIDft-~p~--------------a~~---~~~-~-l~~g~~vVigTTG---~s 87 (243)
T 3qy9_A 41 ---------TPYQQYQHIADVK-GADVAIDFS-NPN--------------LLF---PLL-D-EDFHLPLVVATTG---EK 87 (243)
T ss_dssp ---------CCSCBCSCTTTCT-TCSEEEECS-CHH--------------HHH---HHH-T-SCCCCCEEECCCS---SH
T ss_pred ---------CCCceeCCHHHHh-CCCEEEEeC-ChH--------------HHH---HHH-H-HhcCCceEeCCCC---CC
Confidence 1223456666666 899987443 221 122 222 3 6667666666663 33
Q ss_pred HHHHHHHhhccCCcccccCCCCCch----HHHHHHHHHHHHhcCCceEEEec------cccchhhhhHHHHH
Q psy11160 164 ESIMNVLKANHKTNVQFQGRAADLK----YVEAAARMIAEIATDNKIVVEKS------TVPVRAAESIMNVL 225 (598)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~~~~dl~----~l~~A~~~Ia~~l~~~~lvv~eS------TvP~gtt~~~~~~L 225 (598)
++-...+.+.++..+.. ..|++| -+-...+..++.+.+-++-|+|. -.|-||.-.+.+.+
T Consensus 88 ~e~~~~l~~aa~~~~v~--~a~N~S~Gv~l~~~~~~~aa~~l~~~dieI~E~HH~~K~DaPSGTA~~la~~i 157 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVF--FSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVI 157 (243)
T ss_dssp HHHHHHHHHHTTTSEEE--ECSSCCHHHHHHHHHHHHHHHHTTTSEEEEEEEECTTCCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEE--EECCccHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCHHHHHHHHHH
Confidence 33333344455554443 233433 34455666677777667778776 35889988777766
No 261
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.09 E-value=0.00018 Score=73.11 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=67.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+++.|+|+|-+|.+++..|++ .|. +|++++|++++.+.+....
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~---------------------------~G~~~v~v~~R~~~~a~~la~~~-------- 161 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYK---------------------------IVRPTLTVANRTMSRFNNWSLNI-------- 161 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHT---------------------------TCCSCCEEECSCGGGGTTCCSCC--------
T ss_pred CCEEEEECCcHHHHHHHHHHHH---------------------------CCCCEEEEEeCCHHHHHHHHHhc--------
Confidence 3689999999999999999999 787 9999999998876654321
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
......++.+++.++|+||-|+|....++. ..+ + -...++++.+|++.++.|..|
T Consensus 162 ----------~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~----~~~----l------~~~~l~~~~~V~D~vY~P~~T 216 (277)
T 3don_A 162 ----------NKINLSHAESHLDEFDIIINTTPAGMNGNT----DSV----I------SLNRLASHTLVSDIVYNPYKT 216 (277)
T ss_dssp ----------EEECHHHHHHTGGGCSEEEECCC-----------CCS----S------CCTTCCSSCEEEESCCSSSSC
T ss_pred ----------ccccHhhHHHHhcCCCEEEECccCCCCCCC----cCC----C------CHHHcCCCCEEEEecCCCCCC
Confidence 111123455568899999999765432110 000 0 023467899999999987665
No 262
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.08 E-value=0.00072 Score=72.10 Aligned_cols=80 Identities=11% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCCCceEEEECCChhHHHHHHHHHHh---CCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCC
Q psy11160 2 VQTISHICCIGAGYVGGPTCSVIALK---CPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLP 77 (598)
Q Consensus 2 ~~~~~~I~viG~G~vG~~~a~~la~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~ 77 (598)
|++..||+|||+|.+|...+..+.+- .|+. ..+.+|+ ++|+++++.+.+.+..
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~---------------------~~~~elvav~d~~~~~a~~~a~~~-- 79 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL---------------------PKRPHLYALADQDQAMAERHAAKL-- 79 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS---------------------SSEEEEEEEECSSHHHHHHHHHHH--
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhcccccccc---------------------CCCeEEEEEEcCCHHHHHHHHHHc--
Confidence 34456899999999999888888750 0000 0234555 6799999998876421
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+..++.+|+++.++ +.|+|+||+|+..
T Consensus 80 ---------------~~~~~y~d~~~ll~~~~vD~V~I~tp~~~ 108 (412)
T 4gqa_A 80 ---------------GAEKAYGDWRELVNDPQVDVVDITSPNHL 108 (412)
T ss_dssp ---------------TCSEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred ---------------CCCeEECCHHHHhcCCCCCEEEECCCcHH
Confidence 11256788998886 5799999977654
No 263
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.08 E-value=0.00081 Score=73.50 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=54.6
Q ss_pred CceEEEECC----ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCC
Q psy11160 5 ISHICCIGA----GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 5 ~~~I~viG~----G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~ 79 (598)
++||+|||+ |.+|...+..|.. ...+++| .++|+++++.+.+.+... +
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~-------------------------~~~~~~lvav~d~~~~~a~~~a~~~g-~- 91 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQ-------------------------LSSQFQIVALYNPTLKSSLQTIEQLQ-L- 91 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHH-------------------------TTTTEEEEEEECSCHHHHHHHHHHTT-C-
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHh-------------------------cCCCeEEEEEEeCCHHHHHHHHHHcC-C-
Confidence 368999999 9999999999987 1025675 478999999887764210 0
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
...+..+|+++.++ +.|+|+||+|+.
T Consensus 92 -------------~~~~~~~d~~ell~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 92 -------------KHATGFDSLESFAQYKDIDMIVVSVKVP 119 (479)
T ss_dssp -------------TTCEEESCHHHHHHCTTCSEEEECSCHH
T ss_pred -------------CcceeeCCHHHHhcCCCCCEEEEcCCcH
Confidence 11346788988885 689999997654
No 264
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.03 E-value=0.00061 Score=71.88 Aligned_cols=103 Identities=18% Similarity=0.264 Sum_probs=65.6
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~~~ 84 (598)
++|+|+|+|.+|..+|..++. .|.+|+++|+++++.+.+.+ ....+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~---------------------------~Ga~V~~~d~~~~~~~~~~~~~g~~~~----- 214 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALG---------------------------MGAQVTILDVNHKRLQYLDDVFGGRVI----- 214 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHHHHTTTSEE-----
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEECCHHHHHHHHHhcCceEE-----
Confidence 689999999999999999998 78999999999999887653 211100
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
....-..+..+.++.+|+||.|++.+... .+. -+.+...+.++++.++|+.|....
T Consensus 215 --------~~~~~~~~l~~~~~~~DvVi~~~g~~~~~-------~~~-----li~~~~l~~mk~gg~iV~v~~~~g 270 (369)
T 2eez_A 215 --------TLTATEANIKKSVQHADLLIGAVLVPGAK-------APK-----LVTRDMLSLMKEGAVIVDVAVDQG 270 (369)
T ss_dssp --------EEECCHHHHHHHHHHCSEEEECCC--------------C-----CSCHHHHTTSCTTCEEEECC----
T ss_pred --------EecCCHHHHHHHHhCCCEEEECCCCCccc-------cch-----hHHHHHHHhhcCCCEEEEEecCCC
Confidence 00000123556778999999998765310 000 012344566788888888775443
No 265
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.02 E-value=0.004 Score=64.86 Aligned_cols=99 Identities=12% Similarity=0.169 Sum_probs=67.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
++++|||+|.+|..+|..+.. -|.+|++||+....... ..
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~---------------------------fg~~v~~~d~~~~~~~~-~~------------ 181 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLA---------------------------FGMKVLCYDVVKREDLK-EK------------ 181 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCCHHHH-HT------------
T ss_pred cEEEEECcchHHHHHHHhhcc---------------------------cCceeeecCCccchhhh-hc------------
Confidence 589999999999999999888 68999999986432211 11
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
+.. ..++++.+++||+|++++|--..+. +..+ +.....++++.++|+.|--..=..+.
T Consensus 182 --------~~~-~~~l~ell~~sDivslh~Plt~~T~-----~li~--------~~~l~~mk~~a~lIN~aRG~iVde~a 239 (334)
T 3kb6_A 182 --------GCV-YTSLDELLKESDVISLHVPYTKETH-----HMIN--------EERISLMKDGVYLINTARGKVVDTDA 239 (334)
T ss_dssp --------TCE-ECCHHHHHHHCSEEEECCCCCTTTT-----TCBC--------HHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred --------Cce-ecCHHHHHhhCCEEEEcCCCChhhc-----cCcC--------HHHHhhcCCCeEEEecCccccccHHH
Confidence 122 2467889999999999987433221 1223 23445789999999876554433333
Q ss_pred H
Q psy11160 166 I 166 (598)
Q Consensus 166 ~ 166 (598)
+
T Consensus 240 L 240 (334)
T 3kb6_A 240 L 240 (334)
T ss_dssp H
T ss_pred H
Confidence 3
No 266
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.01 E-value=0.002 Score=61.77 Aligned_cols=72 Identities=11% Similarity=0.131 Sum_probs=52.0
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||.|.|+ |++|..++..|++ .|++|+++++++++.+.+......+..-++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~ 53 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARR---------------------------RGHEVLAVVRDPQKAADRLGATVATLVKEPL 53 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHTCTTSEEEECCGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHH---------------------------CCCEEEEEEecccccccccCCCceEEecccc
Confidence 58999998 9999999999999 8999999999999988764321111111110
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
+ .+. +++.++|+||-+....
T Consensus 54 d-------------~~~-~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 54 V-------------LTE-ADLDSVDAVVDALSVP 73 (224)
T ss_dssp G-------------CCH-HHHTTCSEEEECCCCC
T ss_pred c-------------ccH-hhcccCCEEEECCccC
Confidence 0 011 5788999999998653
No 267
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.97 E-value=0.0012 Score=70.41 Aligned_cols=111 Identities=17% Similarity=0.183 Sum_probs=65.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCC-CC--
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIY-EP-- 81 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~-e~-- 81 (598)
.+|+|||+|.+|..++..+.. .|.+|+++|+++++.+.+.+ |...+. +.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~---------------------------~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~ 225 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANS---------------------------LGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 225 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCGGGHHHHHHTTCEECCC----
T ss_pred CEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEcCCHHHHHHHHHcCCEEEEecccc
Confidence 589999999999999999888 78899999999988877654 211110 00
Q ss_pred ------ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe
Q psy11160 82 ------GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK 155 (598)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ 155 (598)
|........... ....++.+.+..+|+||.++..|... .+.+ + .+...+.++++.+||+.
T Consensus 226 ~~~~~~g~~~~~~~~~~~--~~~~~l~e~~~~aDvVI~~~~~pg~~-------ap~l--i---~~~~l~~mk~g~vIVdv 291 (401)
T 1x13_A 226 EAGSGDGYAKVMSDAFIK--AEMELFAAQAKEVDIIVTTALIPGKP-------APKL--I---TREMVDSMKAGSVIVDL 291 (401)
T ss_dssp ----CCHHHHHHSHHHHH--HHHHHHHHHHHHCSEEEECCCCTTSC-------CCCC--B---CHHHHHTSCTTCEEEET
T ss_pred cccccccchhhccHHHHH--HHHHHHHHHhCCCCEEEECCccCCCC-------CCee--e---CHHHHhcCCCCcEEEEE
Confidence 000000000000 00012456778999999996444211 0110 1 12344567899999987
Q ss_pred cC
Q psy11160 156 ST 157 (598)
Q Consensus 156 ST 157 (598)
+.
T Consensus 292 a~ 293 (401)
T 1x13_A 292 AA 293 (401)
T ss_dssp TG
T ss_pred cC
Confidence 65
No 268
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.96 E-value=0.002 Score=61.91 Aligned_cols=101 Identities=11% Similarity=0.249 Sum_probs=62.7
Q ss_pred Cce-EEEEC-CChhHHHHHHHHH-HhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH-HHHHHH-cC-CCCC
Q psy11160 5 ISH-ICCIG-AGYVGGPTCSVIA-LKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE-RIRQWN-SN-KLPI 78 (598)
Q Consensus 5 ~~~-I~viG-~G~vG~~~a~~la-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~-~~~~~~-~~-~~~~ 78 (598)
||| |.|.| .|.+|..++..|+ + .|++|++++++++ +.+.+. .+ ....
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~---------------------------~g~~V~~~~r~~~~~~~~~~~~~~~~~~ 56 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTY---------------------------TDMHITLYGRQLKTRIPPEIIDHERVTV 56 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHH---------------------------CCCEEEEEESSHHHHSCHHHHTSTTEEE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhc---------------------------CCceEEEEecCccccchhhccCCCceEE
Confidence 345 99999 5999999999999 7 8999999999998 777663 11 1000
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.. ..+.-..+..++++++|+||.+.+.. ++. .+.+++.+.+ ...+.+|..+|+.
T Consensus 57 ~~------------~D~~d~~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~-~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 57 IE------------GSFQNPGXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSR-XNIRRVIGVSMAG 110 (221)
T ss_dssp EE------------CCTTCHHHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHH-TTCCEEEEEEETT
T ss_pred EE------------CCCCCHHHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHh-cCCCeEEEEeece
Confidence 00 01111123455778999999987532 222 3333333322 2335677666654
No 269
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.95 E-value=0.001 Score=68.77 Aligned_cols=89 Identities=13% Similarity=0.238 Sum_probs=59.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
++||+|||+|.||..++..+.+. .+.++ .++|+++++ .+ +
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~--------------------------~~~elvav~d~~~~~--~~--~--------- 43 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ--------------------------PDMDLVGIFSRRATL--DT--K--------- 43 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC--------------------------SSEEEEEEEESSSCC--SS--S---------
T ss_pred CCEEEEEeecHHHHHHHHHHhcC--------------------------CCCEEEEEEcCCHHH--hh--c---------
Confidence 46999999999999999888771 35664 578887544 11 1
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
.++..++|+++.+.++|+||+|+|+... .+.+...+..++-|+.+++..
T Consensus 44 ---------~gv~~~~d~~~ll~~~DvViiatp~~~h------------------~~~~~~al~aG~~Vv~ekp~~ 92 (320)
T 1f06_A 44 ---------TPVFDVADVDKHADDVDVLFLCMGSATD------------------IPEQAPKFAQFACTVDTYDNH 92 (320)
T ss_dssp ---------SCEEEGGGGGGTTTTCSEEEECSCTTTH------------------HHHHHHHHTTTSEEECCCCCG
T ss_pred ---------CCCceeCCHHHHhcCCCEEEEcCCcHHH------------------HHHHHHHHHCCCEEEECCCCc
Confidence 0245567777666789999999865421 223344556677777766653
No 270
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.86 E-value=0.0014 Score=69.35 Aligned_cols=106 Identities=10% Similarity=0.135 Sum_probs=69.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..||+|||+| +|...+..+++ ...+++++ ++|+++++.+.+.+.
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~-------------------------~~~~~elvav~~~~~~~a~~~a~~--------- 51 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQ-------------------------PPEGLELVGLLAQGSARSRELAHA--------- 51 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSS-------------------------CCTTEEEEEEECCSSHHHHHHHHH---------
T ss_pred CCEEEEEehH-HHHHHHHHHHh-------------------------CCCCeEEEEEECCCHHHHHHHHHH---------
Confidence 4689999999 59876666655 11357766 579999999887642
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
-++...+|+++.+++.|+++|++|++.... ...+.....+..|+-|+.+=.+.+..+
T Consensus 52 ---------~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~--------------~~~~~a~~al~aGkhVl~EKPl~~~ea 108 (372)
T 4gmf_A 52 ---------FGIPLYTSPEQITGMPDIACIVVRSTVAGG--------------AGTQLARHFLARGVHVIQEHPLHPDDI 108 (372)
T ss_dssp ---------TTCCEESSGGGCCSCCSEEEECCC--CTTS--------------HHHHHHHHHHHTTCEEEEESCCCHHHH
T ss_pred ---------hCCCEECCHHHHhcCCCEEEEECCCcccch--------------hHHHHHHHHHHcCCcEEEecCCCHHHH
Confidence 123456788888899999999998876421 111223334556776666666766666
Q ss_pred HHHHH
Q psy11160 164 ESIMN 168 (598)
Q Consensus 164 ~~~~~ 168 (598)
+++.+
T Consensus 109 ~~l~~ 113 (372)
T 4gmf_A 109 SSLQT 113 (372)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 271
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.85 E-value=0.004 Score=62.96 Aligned_cols=162 Identities=13% Similarity=0.118 Sum_probs=93.9
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEE-EeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTV-VDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~-~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|+| +|+||..++..+... .++++++ +|++..... |.. .
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--------------------------~~~eLv~~~d~~~~~~~----G~d-~---- 51 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--------------------------PDATLVGALDRTGSPQL----GQD-A---- 51 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--------------------------TTEEEEEEBCCTTCTTT----TSB-T----
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--------------------------CCCEEEEEEEecCcccc----ccc-H----
Confidence 57999999 899999999988871 5777776 687643211 110 0
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.++.. ...++..++|+++.++++|+||-+++ |. .+. +.+...+..+.-+|+.||-.
T Consensus 52 -gel~g--~~~gv~v~~dl~~ll~~~DVVIDfT~-p~--------------a~~---~~~~~al~~G~~vVigTTG~--- 107 (272)
T 4f3y_A 52 -GAFLG--KQTGVALTDDIERVCAEADYLIDFTL-PE--------------GTL---VHLDAALRHDVKLVIGTTGF--- 107 (272)
T ss_dssp -TTTTT--CCCSCBCBCCHHHHHHHCSEEEECSC-HH--------------HHH---HHHHHHHHHTCEEEECCCCC---
T ss_pred -HHHhC--CCCCceecCCHHHHhcCCCEEEEcCC-HH--------------HHH---HHHHHHHHcCCCEEEECCCC---
Confidence 00000 00135567888888899999998852 21 122 22333344566677666642
Q ss_pred HHHHHHHHhhccCCcccccCCCCCch----HHHHHHHHHHHHhcCC-ceEEEec------cccchhhhhHHHHHhh
Q psy11160 163 AESIMNVLKANHKTNVQFQGRAADLK----YVEAAARMIAEIATDN-KIVVEKS------TVPVRAAESIMNVLKA 227 (598)
Q Consensus 163 ~~~~~~~l~~~~~~~~~~~~~~~dl~----~l~~A~~~Ia~~l~~~-~lvv~eS------TvP~gtt~~~~~~L~~ 227 (598)
+++-...+.+.++..+.. ..|++| -+-...+..++.+.++ ++-|+|. -.|-||.-.+.+.+.+
T Consensus 108 s~~~~~~L~~aa~~~~vv--~a~N~s~Gv~l~~~~~~~aa~~l~~~~diei~E~HH~~K~DaPSGTA~~la~~i~~ 181 (272)
T 4f3y_A 108 SEPQKAQLRAAGEKIALV--FSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKVDAPSGTALMMGETIAA 181 (272)
T ss_dssp CHHHHHHHHHHTTTSEEE--ECSCCCHHHHHHHHHHHHHHHHTSSSCEEEEEEEECTTCCSSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCEE--EECCCCHHHHHHHHHHHHHHHhcCcCCCEEEEEecCCCCCCCCCHHHHHHHHHHHH
Confidence 222222344444443332 233433 3455566667777654 6777776 3688998777665543
No 272
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.81 E-value=0.0027 Score=61.69 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=54.7
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCC-CCCCCC
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKL-PIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~-~~~e~~ 82 (598)
.|+|.|.|+ |++|..++..|++ .|++|+++++++++.+.+..... .+..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~---------------------------~G~~V~~~~R~~~~~~~~~~~~~~~~~~-- 71 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN---------------------------KGHEPVAMVRNEEQGPELRERGASDIVV-- 71 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSGGGHHHHHHTTCSEEEE--
T ss_pred CCeEEEECCCChHHHHHHHHHHh---------------------------CCCeEEEEECChHHHHHHHhCCCceEEE--
Confidence 478999998 9999999999999 89999999999998887764221 1111
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
..+. .+..+++.++|+||.+.+.
T Consensus 72 ----------~Dl~--~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 72 ----------ANLE--EDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ----------CCTT--SCCGGGGTTCSEEEECCCC
T ss_pred ----------cccH--HHHHHHHcCCCEEEECCCC
Confidence 1111 4456678899999998764
No 273
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.80 E-value=0.0052 Score=65.58 Aligned_cols=69 Identities=13% Similarity=0.258 Sum_probs=52.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHc--CCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNS--NKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~--~~~~~~e~ 81 (598)
.++|+|||+|.||..++..+.. .|. +|+++|+++++.+.+.+ |.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~---------------------------~G~~~V~v~~r~~~ra~~la~~~g~------ 213 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVD---------------------------RGVRAVLVANRTYERAVELARDLGG------ 213 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHH---------------------------HCCSEEEEECSSHHHHHHHHHHHTC------
T ss_pred CCEEEEEChHHHHHHHHHHHHH---------------------------CCCCEEEEEeCCHHHHHHHHHHcCC------
Confidence 4689999999999999999998 687 99999999998765542 21
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
......++.+.+.++|+||.|+|.+
T Consensus 214 ------------~~~~~~~l~~~l~~aDvVi~at~~~ 238 (404)
T 1gpj_A 214 ------------EAVRFDELVDHLARSDVVVSATAAP 238 (404)
T ss_dssp ------------EECCGGGHHHHHHTCSEEEECCSSS
T ss_pred ------------ceecHHhHHHHhcCCCEEEEccCCC
Confidence 0000135566788999999998655
No 274
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.72 E-value=0.017 Score=60.11 Aligned_cols=72 Identities=15% Similarity=0.245 Sum_probs=47.3
Q ss_pred CceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.+|.. .+..+.. ..+++|+ ++|++ +.+.+.+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~--------------------------~~~~~l~av~d~~--~~~~~a~~-------- 45 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI--------------------------RETLEVKTIFDLH--VNEKAAAP-------- 45 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT--------------------------CTTEEEEEEECTT--CCHHHHHH--------
T ss_pred eeEEEEEccCHHHHHHHHHHHhh--------------------------CCCeEEEEEECCC--HHHHHHHh--------
Confidence 469999999999984 5555554 0567775 67877 22332210
Q ss_pred hHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTPT 119 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp~ 119 (598)
. ...+....+|+++.+++ .|+|+||+|+..
T Consensus 46 ----~---~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (349)
T 3i23_A 46 ----F---KEKGVNFTADLNELLTDPEIELITICTPAHT 77 (349)
T ss_dssp ----H---HTTTCEEESCTHHHHSCTTCCEEEECSCGGG
T ss_pred ----h---CCCCCeEECCHHHHhcCCCCCEEEEeCCcHH
Confidence 0 00134677889888875 899999987653
No 275
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.70 E-value=0.0069 Score=65.33 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=67.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHc---CC-CCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNS---NK-LPIY 79 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~---~~-~~~~ 79 (598)
..||+|||+|.||..++..+.. . .+.+| .++|+++++.+.+.+ |. .++.
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~-~-------------------------~~veLvAV~D~~~era~~~a~~~yG~~~~~~ 76 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVAR-M-------------------------QGIEVGALSARRLPNTFKAIRTAYGDEENAR 76 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT-S-------------------------SSEEEEEEECSSTHHHHHHHHHHHSSSTTEE
T ss_pred ceEEEEECChHHHHHHHHHHhh-C-------------------------CCcEEEEEEeCCHHHHHHHHHHhcCCccccc
Confidence 4689999999999999888765 1 56654 467999999887653 31 1110
Q ss_pred C-CChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEe
Q psy11160 80 E-PGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEK 155 (598)
Q Consensus 80 e-~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ 155 (598)
. ....++-.........+++|+++.++ +.|+|++|+|.|. ...+.+...+..|+-|+..
T Consensus 77 ~~~~~~~i~~a~~~g~~~v~~D~eeLL~d~dIDaVviaTp~p~-----------------~H~e~a~~AL~AGKHVv~~ 138 (446)
T 3upl_A 77 EATTESAMTRAIEAGKIAVTDDNDLILSNPLIDVIIDATGIPE-----------------VGAETGIAAIRNGKHLVMM 138 (446)
T ss_dssp ECSSHHHHHHHHHTTCEEEESCHHHHHTCTTCCEEEECSCCHH-----------------HHHHHHHHHHHTTCEEEEC
T ss_pred cccchhhhhhhhccCCceEECCHHHHhcCCCCCEEEEcCCChH-----------------HHHHHHHHHHHcCCcEEec
Confidence 0 01111111001134678899998887 4899999976541 1233444556677777643
No 276
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.68 E-value=0.0032 Score=59.21 Aligned_cols=108 Identities=14% Similarity=0.135 Sum_probs=61.9
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|+|.|.|+ |++|..++..|.+ .|++|+++++++++.+.+.. +++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~---------------------------~g~~V~~~~r~~~~~~~~~~-------~~~~ 49 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ---------------------------AGYEVTVLVRDSSRLPSEGP-------RPAH 49 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCGGGSCSSSC-------CCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHHH---------------------------CCCeEEEEEeChhhcccccC-------CceE
Confidence 78999998 9999999999999 89999999999765432110 0100
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
.....+.-..++.++++++|+||.+.+.....+ ....++......++...+. ..+.+|..+|.
T Consensus 50 -----~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~----~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~ 112 (206)
T 1hdo_A 50 -----VVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKAH-GVDKVVACTSA 112 (206)
T ss_dssp -----EEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHHH-TCCEEEEECCG
T ss_pred -----EEEecCCCHHHHHHHHcCCCEEEECccCCCCCC----ccchHHHHHHHHHHHHHHh-CCCeEEEEeee
Confidence 000001001234456788999999875432110 1122333444444444332 33455555554
No 277
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=96.67 E-value=0.0076 Score=64.40 Aligned_cols=95 Identities=11% Similarity=0.139 Sum_probs=67.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHH---HHHHcCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERI---RQWNSNKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~---~~~~~~~~~~~e~ 81 (598)
.++|+|||.|.-|.+-|.+|.+ .|.+|++=-|..... ..|.+.
T Consensus 37 gK~IaVIGyGsQG~AqAlNLRD---------------------------SGv~V~Vglr~~s~~e~~~S~~~A------- 82 (491)
T 3ulk_A 37 GKKVVIVGCGAQGLNQGLNMRD---------------------------SGLDISYALRKEAIAEKRASWRKA------- 82 (491)
T ss_dssp TSEEEEESCSHHHHHHHHHHHH---------------------------TTCEEEEEECHHHHHTTCHHHHHH-------
T ss_pred CCEEEEeCCChHhHHHHhHHHh---------------------------cCCcEEEEeCCCCcccccchHHHH-------
Confidence 3689999999999999999999 899998865522110 111110
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
...+++. .++.++++.||+|++-+|... -..+.+.|.+++++|..+......
T Consensus 83 ---------~~~Gf~v-~~~~eA~~~ADvV~~L~PD~~---------------q~~vy~~I~p~lk~G~~L~faHGF 134 (491)
T 3ulk_A 83 ---------TENGFKV-GTYEELIPQADLVINLTPDKQ---------------HSDVVRTVQPLMKDGAALGYSHGF 134 (491)
T ss_dssp ---------HHTTCEE-EEHHHHGGGCSEEEECSCGGG---------------HHHHHHHHGGGSCTTCEEEESSCH
T ss_pred ---------HHCCCEe-cCHHHHHHhCCEEEEeCChhh---------------HHHHHHHHHhhCCCCCEEEecCcc
Confidence 0023443 357889999999999976532 234457799999999999876554
No 278
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.67 E-value=0.0017 Score=67.99 Aligned_cols=77 Identities=10% Similarity=0.124 Sum_probs=48.8
Q ss_pred eEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 7 HICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 7 ~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
||+|||+|.+|...+..+.. .|++ .. ...+.+|+ ++|+++++.+.+.+..
T Consensus 27 rvgiIG~G~ig~~H~~a~~~-~~~~----~~--------------~~~~~~lvav~d~~~~~a~~~a~~~---------- 77 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNA-VKTV----FG--------------DVERPRLVHLAEANAGLAEARAGEF---------- 77 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTT-HHHH----HC--------------SSCCCEEEEEECC--TTHHHHHHHH----------
T ss_pred cEEEEcCCHHHHHHHHHHHh-hhhh----hc--------------cCCCcEEEEEECCCHHHHHHHHHHh----------
Confidence 79999999999877666543 0000 00 00345654 6799999988776420
Q ss_pred HHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+.-++.+|+++.++ +.|+|+||+|+..
T Consensus 78 -------g~~~~y~d~~ell~~~~iDaV~IatP~~~ 106 (393)
T 4fb5_A 78 -------GFEKATADWRALIADPEVDVVSVTTPNQF 106 (393)
T ss_dssp -------TCSEEESCHHHHHHCTTCCEEEECSCGGG
T ss_pred -------CCCeecCCHHHHhcCCCCcEEEECCChHH
Confidence 11246788998886 4799999987654
No 279
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.57 E-value=0.0037 Score=66.23 Aligned_cols=114 Identities=11% Similarity=0.102 Sum_probs=65.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
..+|+|+|+|.+|..++..+.. .|.+|+++|+++++.+.+.+-......-...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~---------------------------~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~ 224 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR---------------------------LGAVVMATDVRAATKEQVESLGGKFITVDDE 224 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCSTTHHHHHHTTCEECCC---
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHHcCCeEEeeccc
Confidence 3689999999999999998888 7889999999988877665411111000000
Q ss_pred HH-HhhhcCCce-EEe--------cCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 85 EV-VKKTRDVNL-FFS--------TDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 85 ~~-~~~~~~~~~-~~~--------~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
+. ..+..++.. ..+ ..+.+.++.+|+||.|++.|-.+ .+.+ + .+...+.++++.+||+
T Consensus 225 ~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~-------~~~l--i---~~~~l~~mk~g~vivd 292 (384)
T 1l7d_A 225 AMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKP-------APVL--I---TEEMVTKMKPGSVIID 292 (384)
T ss_dssp --------------------CCHHHHHHHHHTTCSEEEECCCCTTSC-------CCCC--S---CHHHHTTSCTTCEEEE
T ss_pred ccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCC-------CCee--e---CHHHHhcCCCCCEEEE
Confidence 00 000000000 001 11556778999999998444211 0010 1 1233456788999988
Q ss_pred ecC
Q psy11160 155 KST 157 (598)
Q Consensus 155 ~ST 157 (598)
.+.
T Consensus 293 va~ 295 (384)
T 1l7d_A 293 LAV 295 (384)
T ss_dssp TTG
T ss_pred Eec
Confidence 764
No 280
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.55 E-value=0.0026 Score=62.08 Aligned_cols=74 Identities=12% Similarity=0.239 Sum_probs=49.1
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-ceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-IQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+++|.|.| .|.+|..++..|++ .| ++|+++++++++.+.+... +
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~---------------------------~G~~~V~~~~R~~~~~~~~~~~-------~ 68 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLAD---------------------------KQTIKQTLFARQPAKIHKPYPT-------N 68 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT---------------------------CTTEEEEEEESSGGGSCSSCCT-------T
T ss_pred ccEEEEEeCCcHHHHHHHHHHHh---------------------------CCCceEEEEEcChhhhcccccC-------C
Confidence 46799999 69999999999999 88 9999999998765432211 0
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
+. .....+.-..+..++++.+|+||.+.+.
T Consensus 69 ~~-----~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 69 SQ-----IIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp EE-----EEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred cE-----EEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 00 0000111112345567899999988753
No 281
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.0066 Score=66.05 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=66.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-CceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+++|.|+|+|.+|.+++..|++ . |++|+++++++++.+.+.+. ..+.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~---------------------------~~g~~V~v~~R~~~ka~~la~~-~~~~---- 70 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAA---------------------------NDDINVTVACRTLANAQALAKP-SGSK---- 70 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHT---------------------------STTEEEEEEESSHHHHHHHHGG-GTCE----
T ss_pred CCEEEEECChHHHHHHHHHHHh---------------------------CCCCeEEEEECCHHHHHHHHHh-cCCc----
Confidence 4689999999999999999998 5 78999999999999887642 0000
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.....+.-..++.++++++|+||.|+|.... . .+. ...+..+..+++.+...|.++
T Consensus 71 ------~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~-----------~----~v~---~a~l~~g~~vvd~~~~~p~~~ 126 (467)
T 2axq_A 71 ------AISLDVTDDSALDKVLADNDVVISLIPYTFH-----------P----NVV---KSAIRTKTDVVTSSYISPALR 126 (467)
T ss_dssp ------EEECCTTCHHHHHHHHHTSSEEEECSCGGGH-----------H----HHH---HHHHHHTCEEEECSCCCHHHH
T ss_pred ------EEEEecCCHHHHHHHHcCCCEEEECCchhhh-----------H----HHH---HHHHhcCCEEEEeecCCHHHH
Confidence 0000000011344567899999999754211 0 111 122345677777777667654
Q ss_pred H
Q psy11160 164 E 164 (598)
Q Consensus 164 ~ 164 (598)
.
T Consensus 127 ~ 127 (467)
T 2axq_A 127 E 127 (467)
T ss_dssp H
T ss_pred H
Confidence 3
No 282
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.51 E-value=0.0055 Score=64.54 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=37.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
.++|+|+|+|.||..+|..|.. .|.+|+++|+++++++.+.+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~---------------------------~GakVvv~D~~~~~l~~~a~ 214 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNT---------------------------EGAKLVVTDVNKAAVSAAVA 214 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHH
T ss_pred cCEEEEECchHHHHHHHHHHHH---------------------------CCCEEEEEcCCHHHHHHHHH
Confidence 3689999999999999999999 89999999999998887653
No 283
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.51 E-value=0.0039 Score=63.11 Aligned_cols=112 Identities=12% Similarity=0.040 Sum_probs=63.8
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+|+|.|.| .|++|..++..|.+ .|++|+++++++...+ +. +.. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~~-~~-~~~-~----- 46 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKN---------------------------DGNTPIILTRSIGNKA-IN-DYE-Y----- 46 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCCC-------CCE-E-----
T ss_pred CCEEEEECCCcHHHHHHHHHHHh---------------------------CCCEEEEEeCCCCccc-CC-ceE-E-----
Confidence 36899999 59999999999999 8999999999854443 32 110 0
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
....+. ..++.++++++|+||-+.......+ .......++.....+++...+ .....+|..+|+...|
T Consensus 47 -------~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~-~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 47 -------RVSDYT-LEDLINQLNDVDAVVHLAATRGSQG-KISEFHDNEILTQNLYDACYE-NNISNIVYASTISAYS 114 (311)
T ss_dssp -------EECCCC-HHHHHHHTTTCSEEEECCCCCCSSS-CGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEEGGGCC
T ss_pred -------EEcccc-HHHHHHhhcCCCEEEEccccCCCCC-hHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEccHHHhC
Confidence 012233 4456667889999998875322110 001112233334444444433 2334566666654433
No 284
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.51 E-value=0.0082 Score=64.98 Aligned_cols=104 Identities=17% Similarity=0.226 Sum_probs=64.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
+++|.|+|+|.+|..++..|++ .|++|+++|+++++.+.+.+....+.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~---------------------------~G~~V~v~~R~~~~a~~la~~~~~~~----- 50 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTD---------------------------SGIKVTVACRTLESAKKLSAGVQHST----- 50 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHT---------------------------TTCEEEEEESSHHHHHHTTTTCTTEE-----
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CcCEEEEEECCHHHHHHHHHhcCCce-----
Confidence 4689999999999999999998 78999999999999887653210000
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
.....+.-..+..++++++|+||.|+|.... . .... ..+..++.++..+...+++.
T Consensus 51 -----~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~-----------~----~i~~---a~l~~g~~vvd~~~~~~~~~ 106 (450)
T 1ff9_A 51 -----PISLDVNDDAALDAEVAKHDLVISLIPYTFH-----------A----TVIK---SAIRQKKHVVTTSYVSPAMM 106 (450)
T ss_dssp -----EEECCTTCHHHHHHHHTTSSEEEECCC--CH-----------H----HHHH---HHHHHTCEEEESSCCCHHHH
T ss_pred -----EEEeecCCHHHHHHHHcCCcEEEECCccccc-----------h----HHHH---HHHhCCCeEEEeecccHHHH
Confidence 0000000011344567899999999764321 0 1111 12334667777776666654
No 285
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.45 E-value=0.0061 Score=62.75 Aligned_cols=71 Identities=17% Similarity=0.121 Sum_probs=49.4
Q ss_pred CCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCce-EEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQ-VTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+++||+|||+ |++|...+..+.. .+.+ |.++|+++++. .+.+. .
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~---------------------------~~~~lvav~d~~~~~~-~~~~~-~----- 47 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKD---------------------------TGNCLVSAYDINDSVG-IIDSI-S----- 47 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHH---------------------------TTCEEEEEECSSCCCG-GGGGT-C-----
T ss_pred CceEEEEECCCcHHHHHHHHHHHh---------------------------CCCEEEEEEcCCHHHH-HHHhh-C-----
Confidence 3579999999 7999999999988 4544 55678887652 12111 0
Q ss_pred ChHHHHhhhcCCceEEecCHHHHh-----------ccCcEEEEecCCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAI-----------QKAQLIFISVNTPT 119 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~adviii~v~tp~ 119 (598)
....+.+|+++.+ .+.|+|+||+|+..
T Consensus 48 -----------~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~ 85 (318)
T 3oa2_A 48 -----------PQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYL 85 (318)
T ss_dssp -----------TTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGG
T ss_pred -----------CCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHH
Confidence 1345677887665 46899999977654
No 286
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.44 E-value=0.038 Score=56.03 Aligned_cols=165 Identities=16% Similarity=0.126 Sum_probs=102.6
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
.+.+|+|+|- |. ....+++.|.+.|++|.+++.. .+.... . +.....+..+.++++
T Consensus 4 ~~m~i~v~~~-------~~---~~~~~~~~L~~~g~~v~~~~~~--~~~~~~---------~---~~~~~~~~~~~~~~~ 59 (293)
T 3d4o_A 4 TGKHVVIIGG-------DA---RQLEIIRKLSTFDAKISLVGFD--QLDDGF---------I---GVTKMRIDEVDWNTV 59 (293)
T ss_dssp TTCEEEEECB-------CH---HHHHHHHHHHHTTCEEEEESCT--TCC--C---------T---TCEEECGGGCCGGGC
T ss_pred cCcEEEEECC-------CH---HHHHHHHHHHhCCCEEEEeccc--cccccc---------c---ccccccchHHHHhcC
Confidence 5678999873 22 3456678899999999886421 110000 0 113345566778899
Q ss_pred CEEEEEee-cc-----------chhhccHHHHHhccCCCcEEEecCCCCCh-hhhhhccceeeecc-------chhhhHH
Q psy11160 473 HAIVVCTE-WD-----------EFVTLDYKRIYEGMMKPAYIFDGRKILNH-DALLDIGFNVHTVI-------DLNEYQK 532 (598)
Q Consensus 473 dalii~t~-~~-----------~f~~ld~~~l~~~m~~~~iI~D~r~i~d~-~~~~~~G~~y~~v~-------~iN~~~~ 532 (598)
|++++... +. ....++.+. .+.+.+-++|+-+.+-.|. +.+.+.|+.+.... ...+..-
T Consensus 60 d~ii~~~~~~~~~~~i~~~~~~~~~~~~~~~-l~~~~~l~~i~~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~sva 138 (293)
T 3d4o_A 60 DAILLPISGTNEAGKVDTIFSNESIVLTEEM-IEKTPNHCVVYSGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTA 138 (293)
T ss_dssp SEEECCTTCCCTTCBCCBSSCSCCCBCCHHH-HHTSCTTCEEEESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHH
T ss_pred CEEEeccccccCCceeecccccCCccchHHH-HHhCCCCCEEEecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHH
Confidence 98886310 00 001133333 3334444577755555554 66778888765443 2234455
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHHHhCCCEEEEECCCC
Q psy11160 533 TRFSEKIISSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKL 592 (598)
Q Consensus 533 ~~~~~~i~~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l~~~g~~v~~~DP~~ 592 (598)
++.+..++..++.++.+++|+|+|+.- -...+++.|...|++|.+|||..
T Consensus 139 e~a~~~~l~~~~~~l~g~~v~IiG~G~----------iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 139 EGTIMMAIQHTDFTIHGANVAVLGLGR----------VGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp HHHHHHHHHHCSSCSTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESSH
T ss_pred HHHHHHHHHhcCCCCCCCEEEEEeeCH----------HHHHHHHHHHhCCCEEEEEECCH
Confidence 666666666666678999999999743 34788999999999999999864
No 287
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.42 E-value=0.0092 Score=62.63 Aligned_cols=102 Identities=21% Similarity=0.319 Sum_probs=69.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~~~ 84 (598)
.+|.|+|+|.+|..++..++. .|.+|+++|+++++.+.+.+ +...+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~---------------------------~Ga~V~v~dr~~~r~~~~~~~~~~~~------ 214 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG---------------------------LGAQVQIFDINVERLSYLETLFGSRV------ 214 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHHHHHGGGS------
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEeCCHHHHHHHHHhhCcee------
Confidence 689999999999999999998 78899999999999887753 11000
Q ss_pred HHHhhhcCCceEE--ecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 85 EVVKKTRDVNLFF--STDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 85 ~~~~~~~~~~~~~--~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.... ..+..+.+.++|+||-|++.|... .+.+ ..+...+.++++.+|++-+..+.|
T Consensus 215 ---------~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~-------~~~l-----i~~~~~~~~~~g~~ivdv~~~~gg 272 (361)
T 1pjc_A 215 ---------ELLYSNSAEIETAVAEADLLIGAVLVPGRR-------APIL-----VPASLVEQMRTGSVIVDVAVDQGG 272 (361)
T ss_dssp ---------EEEECCHHHHHHHHHTCSEEEECCCCTTSS-------CCCC-----BCHHHHTTSCTTCEEEETTCTTCC
T ss_pred ---------EeeeCCHHHHHHHHcCCCEEEECCCcCCCC-------CCee-----cCHHHHhhCCCCCEEEEEecCCCC
Confidence 0000 123445678999999998765421 1110 012334567888899887765544
No 288
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.42 E-value=0.0016 Score=62.61 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=63.7
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
|||.|.| .|++|..++..|++ .|++|+++++++++.+.+ .+ ..+..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~~~~-~~-~~~~~---- 47 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLST---------------------------TDYQIYAGARKVEQVPQY-NN-VKAVH---- 47 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT---------------------------SSCEEEEEESSGGGSCCC-TT-EEEEE----
T ss_pred CeEEEECCCCHHHHHHHHHHHH---------------------------CCCEEEEEECCccchhhc-CC-ceEEE----
Confidence 5899999 79999999999999 899999999998654322 00 00000
Q ss_pred HHHhhhcCCceEE-ecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTRDVNLFF-STDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
..+.- ..++.++++++|+||-+.+..... ....++......++...+. ..+.+|..+|.
T Consensus 48 --------~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~-----~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~ 107 (219)
T 3dqp_A 48 --------FDVDWTPEEMAKQLHGMDAIINVSGSGGKS-----LLKVDLYGAVKLMQAAEKA-EVKRFILLSTI 107 (219)
T ss_dssp --------CCTTSCHHHHHTTTTTCSEEEECCCCTTSS-----CCCCCCHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred --------ecccCCHHHHHHHHcCCCEEEECCcCCCCC-----cEeEeHHHHHHHHHHHHHh-CCCEEEEECcc
Confidence 01110 123445677899999998654321 1234555556555555432 33455555443
No 289
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.42 E-value=0.0021 Score=64.86 Aligned_cols=96 Identities=10% Similarity=0.051 Sum_probs=65.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLDE 85 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~~ 85 (598)
+++.|||+|-+|.+++..|++ .|.+|++++|++++.+.+.+ .
T Consensus 119 k~vlvlGaGGaaraia~~L~~---------------------------~G~~v~V~nRt~~ka~~la~-~---------- 160 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKK---------------------------QGLQVSVLNRSSRGLDFFQR-L---------- 160 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSCTTHHHHHH-H----------
T ss_pred CEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHHH-C----------
Confidence 589999999999999999999 78999999999999887752 0
Q ss_pred HHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 86 VVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
+.... +++ .+.++|+||-|+|.....+. ..+. +.+...++++.+|++.++.| .|
T Consensus 161 --------~~~~~-~~~-~l~~~DiVInaTp~Gm~~~~-----~l~~-------~~l~~~l~~~~~v~D~vY~P-~T 214 (269)
T 3phh_A 161 --------GCDCF-MEP-PKSAFDLIINATSASLHNEL-----PLNK-------EVLKGYFKEGKLAYDLAYGF-LT 214 (269)
T ss_dssp --------TCEEE-SSC-CSSCCSEEEECCTTCCCCSC-----SSCH-------HHHHHHHHHCSEEEESCCSS-CC
T ss_pred --------CCeEe-cHH-HhccCCEEEEcccCCCCCCC-----CCCh-------HHHHhhCCCCCEEEEeCCCC-ch
Confidence 01111 122 13389999999776442210 0111 12333456789999999987 44
No 290
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.42 E-value=0.0028 Score=64.38 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=68.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+++.|+|+|-+|.+++..|++ .|. +|++++|++++.+.+.+..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~---------------------------~G~~~v~v~~R~~~~a~~la~~~-------- 170 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLD---------------------------QQPASITVTNRTFAKAEQLAELV-------- 170 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT---------------------------TCCSEEEEEESSHHHHHHHHHHH--------
T ss_pred CCEEEEECchHHHHHHHHHHHh---------------------------cCCCeEEEEECCHHHHHHHHHHh--------
Confidence 4689999999999999999999 785 9999999999988776421
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAA 163 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~ 163 (598)
... ..+... ++++...++|+||-|+|.....+ .+.+. ...++++.+|++.++.|..|.
T Consensus 171 ----~~~--~~~~~~-~~~~l~~~aDiIInaTp~gm~~~------~~~l~---------~~~l~~~~~V~DlvY~P~~T~ 228 (281)
T 3o8q_A 171 ----AAY--GEVKAQ-AFEQLKQSYDVIINSTSASLDGE------LPAID---------PVIFSSRSVCYDMMYGKGYTV 228 (281)
T ss_dssp ----GGG--SCEEEE-EGGGCCSCEEEEEECSCCCC----------CSCC---------GGGEEEEEEEEESCCCSSCCH
T ss_pred ----hcc--CCeeEe-eHHHhcCCCCEEEEcCcCCCCCC------CCCCC---------HHHhCcCCEEEEecCCCccCH
Confidence 000 112222 23333378999999977654211 01110 134678899999998875543
No 291
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.41 E-value=0.01 Score=61.94 Aligned_cols=96 Identities=9% Similarity=0.099 Sum_probs=70.3
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+|||.....+.. . +..+..++.++++.
T Consensus 171 l~gktvGIIGl----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---------~----g~~~~~~l~ell~~ 227 (345)
T 4g2n_A 171 LTGRRLGIFGM----------GRIGRAIATRARGFGLAIHYHNRTRLSHALE---------E----GAIYHDTLDSLLGA 227 (345)
T ss_dssp CTTCEEEEESC----------SHHHHHHHHHHHTTTCEEEEECSSCCCHHHH---------T----TCEECSSHHHHHHT
T ss_pred cCCCEEEEEEe----------ChhHHHHHHHHHHCCCEEEEECCCCcchhhh---------c----CCeEeCCHHHHHhh
Confidence 57899999998 3678899999999999999999975432221 1 22556789999999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC--CCCh
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK--ILNH 511 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~ 511 (598)
+|+|++++... +-++ ++- .....|++..+++|+.+ +.|.
T Consensus 228 sDvV~l~~Plt~~T~~li~~-~~l~~mk~gailIN~aRG~~vde 270 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDH-DRIAKIPEGAVVINISRGDLIND 270 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCH-HHHHHSCTTEEEEECSCGGGBCH
T ss_pred CCEEEEecCCCHHHHHHhCH-HHHhhCCCCcEEEECCCCchhCH
Confidence 99999999853 3333 343 44556877778988764 3454
No 292
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.39 E-value=0.011 Score=61.81 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=69.8
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|+|+|+ ..-...+++.|...|.+|.+||+.....+..... ++....++.++++
T Consensus 161 ~l~gktvGIIG~----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-----------g~~~~~~l~ell~ 219 (351)
T 3jtm_A 161 DLEGKTIGTVGA----------GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET-----------GAKFVEDLNEMLP 219 (351)
T ss_dssp CSTTCEEEEECC----------SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH-----------CCEECSCHHHHGG
T ss_pred cccCCEEeEEEe----------CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC-----------CCeEcCCHHHHHh
Confidence 357999999998 3578899999999999999999875333222211 2345578999999
Q ss_pred CCCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 471 NTHAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 471 ~adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
.+|+|+++++.. +-+++=-......|++..+++|+.+
T Consensus 220 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 220 KCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp GCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred cCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence 999999999853 4444322344556887778888765
No 293
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.39 E-value=0.026 Score=58.16 Aligned_cols=113 Identities=13% Similarity=0.082 Sum_probs=69.3
Q ss_pred CCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH--HHHHHHHcCCCCCCC
Q psy11160 4 TISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE--ERIRQWNSNKLPIYE 80 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~--~~~~~~~~~~~~~~e 80 (598)
.++||.|||+|-.|.+ +|..|.+ .|++|+++|.++ ...+.+.+...
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~---------------------------~G~~V~~~D~~~~~~~~~~L~~~gi---- 51 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKE---------------------------AGFEVSGCDAKMYPPMSTQLEALGI---- 51 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHH---------------------------TTCEEEEEESSCCTTHHHHHHHTTC----
T ss_pred CCcEEEEEEECHHHHHHHHHHHHh---------------------------CCCEEEEEcCCCCcHHHHHHHhCCC----
Confidence 4679999999999996 8888888 899999999864 23444443111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCCCCCCCCCCCCCcchHHHHHH-------HHHHHHH-cCCCcE
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTPTKTFGNGKGRAADLKYVEAA-------ARMIAEI-ATDNKI 151 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~-------~~~i~~~-~~~~~i 151 (598)
.+..-.+++... .++|+||++-.-|.+ .+.+...++. .+.+... .+...+
T Consensus 52 -------------~v~~g~~~~~l~~~~~d~vV~Spgi~~~--------~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~ 110 (326)
T 3eag_A 52 -------------DVYEGFDAAQLDEFKADVYVIGNVAKRG--------MDVVEAILNLGLPYISGPQWLSENVLHHHWV 110 (326)
T ss_dssp -------------EEEESCCGGGGGSCCCSEEEECTTCCTT--------CHHHHHHHHTTCCEEEHHHHHHHHTGGGSEE
T ss_pred -------------EEECCCCHHHcCCCCCCEEEECCCcCCC--------CHHHHHHHHcCCcEEeHHHHHHHHHhcCCCE
Confidence 122223444333 479999988444432 2222222210 1223443 344578
Q ss_pred EEEecCCchHHHHHHHH
Q psy11160 152 VVEKSTVPVRAAESIMN 168 (598)
Q Consensus 152 vv~~STv~~~~~~~~~~ 168 (598)
|-+..|.--.||..+..
T Consensus 111 IaVTGTnGKTTTt~ll~ 127 (326)
T 3eag_A 111 LGVAGTHGKTTTASMLA 127 (326)
T ss_dssp EEEESSSCHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHH
Confidence 88888888877766554
No 294
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.38 E-value=0.0036 Score=65.38 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=52.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceE-EEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQV-TVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
-+|+|||+|.+|...+..+.. .|++ +.+ . .+.+| .++|+++++.+.+.+..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~-~~~~---------------~~~--~-~~~~l~av~d~~~~~a~~~a~~~--------- 58 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRS-APRF---------------FDL--P-LHPDLNVLCGRDAEAVRAAAGKL--------- 58 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHH-HHHH---------------SCC--S-SEEEEEEEECSSHHHHHHHHHHH---------
T ss_pred CcEEEEcCCHHHHHHHHHHHh-Cccc---------------ccc--c-cCceEEEEEcCCHHHHHHHHHHc---------
Confidence 379999999999988887765 1111 000 0 12354 46799999998876420
Q ss_pred HHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPT 119 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~ 119 (598)
+.-+..+|+++.++ +.|+|+||+|+..
T Consensus 59 --------g~~~~~~d~~~ll~~~~iDaV~I~tP~~~ 87 (390)
T 4h3v_A 59 --------GWSTTETDWRTLLERDDVQLVDVCTPGDS 87 (390)
T ss_dssp --------TCSEEESCHHHHTTCTTCSEEEECSCGGG
T ss_pred --------CCCcccCCHHHHhcCCCCCEEEEeCChHH
Confidence 11246788988885 4799999987654
No 295
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.37 E-value=0.005 Score=63.26 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=49.7
Q ss_pred CCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCce-EEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQ-VTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+++||+|||+ |++|...+..+.. .+.+ |.++|+++++. .+.+. .
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~---------------------------~~~~lvav~d~~~~~~-~~~~~-~----- 47 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKE---------------------------VGGVLVASLDPATNVG-LVDSF-F----- 47 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHH---------------------------TTCEEEEEECSSCCCG-GGGGT-C-----
T ss_pred CceEEEEECCChHHHHHHHHHHHh---------------------------CCCEEEEEEcCCHHHH-HHHhh-C-----
Confidence 3579999999 7999999999988 4544 55688887762 11111 0
Q ss_pred ChHHHHhhhcCCceEEecCHHHHh----------ccCcEEEEecCCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAI----------QKAQLIFISVNTPT 119 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~adviii~v~tp~ 119 (598)
....+.+|+++.+ .+.|+|+||+|+..
T Consensus 48 -----------~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~ 84 (312)
T 3o9z_A 48 -----------PEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHL 84 (312)
T ss_dssp -----------TTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGG
T ss_pred -----------CCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchh
Confidence 1345677887766 57899999987654
No 296
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.36 E-value=0.0026 Score=57.70 Aligned_cols=88 Identities=5% Similarity=-0.021 Sum_probs=59.9
Q ss_pred ceEEEECC----ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 6 SHICCIGA----GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 6 ~~I~viG~----G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
.+|+|||+ |.+|..++..|.+ .||+ +|++|+.+... .+
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~---------------------------~G~~--v~~vnp~~~~~------~i--- 55 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLRE---------------------------QGYR--VLPVNPRFQGE------EL--- 55 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHH---------------------------TTCE--EEEECGGGTTS------EE---
T ss_pred CEEEEECCCCCCCChHHHHHHHHHH---------------------------CCCE--EEEeCCCcccC------cC---
Confidence 58999999 8999999999999 7887 66777664210 00
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.++.+..++.+.....|++++++|.+ .+.++++++.+..- ..+++..++.
T Consensus 56 -----------~G~~~~~sl~el~~~vDlavi~vp~~---------------~~~~v~~~~~~~gi-~~i~~~~g~~ 105 (140)
T 1iuk_A 56 -----------FGEEAVASLLDLKEPVDILDVFRPPS---------------ALMDHLPEVLALRP-GLVWLQSGIR 105 (140)
T ss_dssp -----------TTEECBSSGGGCCSCCSEEEECSCHH---------------HHTTTHHHHHHHCC-SCEEECTTCC
T ss_pred -----------CCEEecCCHHHCCCCCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEEEcCCcC
Confidence 13556667776667899999998653 34555556655443 3566655554
No 297
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.34 E-value=0.016 Score=58.89 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=55.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+++.|+|+|-+|.+++..|+. .|. +|++++|++++.+.+.+..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~---------------------------~G~~~v~i~~R~~~~a~~la~~~-------- 171 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVT---------------------------HGVQKLQVADLDTSRAQALADVI-------- 171 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH---------------------------TTCSEEEEECSSHHHHHHHHHHH--------
T ss_pred CCEEEEECCcHHHHHHHHHHHH---------------------------CCCCEEEEEECCHHHHHHHHHHH--------
Confidence 3689999999999999999999 787 7999999999988775310
Q ss_pred HHHHhhhcCCceEEec--CHHHHhccCcEEEEecCCC
Q psy11160 84 DEVVKKTRDVNLFFST--DIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~--~~~~~~~~adviii~v~tp 118 (598)
. .......+...+ ++.+.++++|+||-|+|..
T Consensus 172 ~---~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~G 205 (283)
T 3jyo_A 172 N---NAVGREAVVGVDARGIEDVIAAADGVVNATPMG 205 (283)
T ss_dssp H---HHHTSCCEEEECSTTHHHHHHHSSEEEECSSTT
T ss_pred H---hhcCCceEEEcCHHHHHHHHhcCCEEEECCCCC
Confidence 0 000011233333 6777889999999997653
No 298
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.30 E-value=0.0068 Score=62.48 Aligned_cols=74 Identities=11% Similarity=0.096 Sum_probs=46.7
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCce-EEEEeCCHHH-HHHHHcCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQ-VTVVDKSEER-IRQWNSNKLPI 78 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~~~~-~~~~~~~~~~~ 78 (598)
|+ +..||+|||+|++|..++..+.++. ++.+ +.++|+++++ ...+.+..
T Consensus 1 M~-~~irVaIIG~G~iG~~~~~~l~~~~-------------------------~~~elvav~d~~~~~~~~~~a~~~--- 51 (312)
T 1nvm_B 1 MN-QKLKVAIIGSGNIGTDLMIKVLRNA-------------------------KYLEMGAMVGIDAASDGLARAQRM--- 51 (312)
T ss_dssp CC-SCEEEEEECCSHHHHHHHHHHHHHC-------------------------SSEEEEEEECSCTTCHHHHHHHHT---
T ss_pred CC-CCCEEEEEcCcHHHHHHHHHHHhhC-------------------------cCeEEEEEEeCChhhhHHHHHHHc---
Confidence 44 3579999999999999999886511 4555 4567998776 44443210
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHh-----ccCcEEEEecCC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAI-----QKAQLIFISVNT 117 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~-----~~adviii~v~t 117 (598)
+....++++++.+ .++|+||+|+|+
T Consensus 52 --------------g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 52 --------------GVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp --------------TCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred --------------CCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 0011234445443 458999999764
No 299
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.28 E-value=0.011 Score=60.46 Aligned_cols=107 Identities=15% Similarity=0.170 Sum_probs=71.5
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTH 473 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ad 473 (598)
.+||+++||. .....+++.|.+.|++|.+||.-....+ .+. ..+...+.++.++++.+|
T Consensus 5 s~kIgfIGLG----------~MG~~mA~~L~~~G~~V~v~dr~~~~~~---~l~--------~~G~~~~~s~~e~~~~~d 63 (297)
T 4gbj_A 5 SEKIAFLGLG----------NLGTPIAEILLEAGYELVVWNRTASKAE---PLT--------KLGATVVENAIDAITPGG 63 (297)
T ss_dssp CCEEEEECCS----------TTHHHHHHHHHHTTCEEEEC-------C---TTT--------TTTCEECSSGGGGCCTTC
T ss_pred CCcEEEEecH----------HHHHHHHHHHHHCCCeEEEEeCCHHHHH---HHH--------HcCCeEeCCHHHHHhcCC
Confidence 3689999993 6789999999999999999997543211 111 113467899999999999
Q ss_pred EEEEEeeccch-hhccHHHHHhccCCCcEEEecCCCCCh------hhhhhcccee
Q psy11160 474 AIVVCTEWDEF-VTLDYKRIYEGMMKPAYIFDGRKILNH------DALLDIGFNV 521 (598)
Q Consensus 474 alii~t~~~~f-~~ld~~~l~~~m~~~~iI~D~r~i~d~------~~~~~~G~~y 521 (598)
+++++...+.- .+.-...+...+.+..+++|...+... +.+.+.|+.|
T Consensus 64 vvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ 118 (297)
T 4gbj_A 64 IVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHY 118 (297)
T ss_dssp EEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred ceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCce
Confidence 99999876542 222223455556677799999988632 3334556655
No 300
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.27 E-value=0.0029 Score=65.77 Aligned_cols=85 Identities=9% Similarity=0.168 Sum_probs=51.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcC-CCCCCC--
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSN-KLPIYE-- 80 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~-~~~~~e-- 80 (598)
+.||+|+|+|++|..++..|.. . ++.+|+ +.|+++++...+.+. ..+.+-
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~-~-------------------------~~~elvav~d~~~~~~~~~~~~~g~~~~~~~ 55 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTK-Q-------------------------DDMELIGITKTKPDFEAYRAKELGIPVYAAS 55 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-C-------------------------TTEEEEEEEESSCSHHHHHHHHTTCCEEESS
T ss_pred CcEEEEEeEhHHHHHHHHHHhc-C-------------------------CCCEEEEEEcCCHHHHHHHHHhcCccccccc
Confidence 3699999999999999998887 1 345554 457776666554421 111110
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
++--..+.. ..+....++++.+.++|+|++|+|..
T Consensus 56 ~~~v~~~~~---~~~~v~~d~~~l~~~vDvV~~aTp~~ 90 (334)
T 2czc_A 56 EEFIPRFEK---EGFEVAGTLNDLLEKVDIIVDATPGG 90 (334)
T ss_dssp GGGHHHHHH---HTCCCSCBHHHHHTTCSEEEECCSTT
T ss_pred cccceeccC---CceEEcCcHHHhccCCCEEEECCCcc
Confidence 010000111 12345568888888999999997654
No 301
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.26 E-value=0.048 Score=58.84 Aligned_cols=112 Identities=9% Similarity=0.096 Sum_probs=68.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH----HHHHHHcCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE----RIRQWNSNKLPIYE 80 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~----~~~~~~~~~~~~~e 80 (598)
.+||.|||+|..|.+.|..|++ .|++|+++|.++. ..+.+.+...
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~---------------------------~G~~V~~~D~~~~~~~~~~~~L~~~gi---- 57 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAK---------------------------LGAIVTVNDGKPFDENPTAQSLLEEGI---- 57 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHH---------------------------TTCEEEEEESSCGGGCHHHHHHHHTTC----
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---------------------------CCCEEEEEeCCcccCChHHHHHHhCCC----
Confidence 3689999999999999999999 8999999998542 3334432111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhcc-CcEEEEecCCCCCCCCCCCCCCcchHHHHHH----H--HHHHHHcCCCcEEE
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQK-AQLIFISVNTPTKTFGNGKGRAADLKYVEAA----A--RMIAEIATDNKIVV 153 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-adviii~v~tp~~~~~~~~~~~~~~~~~~~~----~--~~i~~~~~~~~ivv 153 (598)
.+..-.+..+.+.+ +|+||++..-|.+ .+.+...++. + -+++..+.+..+|-
T Consensus 58 -------------~~~~g~~~~~~~~~~~d~vv~spgi~~~--------~p~~~~a~~~gi~v~~~~e~~~~~~~~~~Ia 116 (451)
T 3lk7_A 58 -------------KVVCGSHPLELLDEDFCYMIKNPGIPYN--------NPMVKKALEKQIPVLTEVELAYLVSESQLIG 116 (451)
T ss_dssp -------------EEEESCCCGGGGGSCEEEEEECTTSCTT--------SHHHHHHHHTTCCEECHHHHHHHHCCSEEEE
T ss_pred -------------EEEECCChHHhhcCCCCEEEECCcCCCC--------ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEE
Confidence 12222233334466 8999998554432 2222222210 0 02222233557888
Q ss_pred EecCCchHHHHHHHH
Q psy11160 154 EKSTVPVRAAESIMN 168 (598)
Q Consensus 154 ~~STv~~~~~~~~~~ 168 (598)
+..|.--.||..+..
T Consensus 117 VTGTnGKTTTt~ml~ 131 (451)
T 3lk7_A 117 ITGSNGKTTTTTMIA 131 (451)
T ss_dssp EECSSCHHHHHHHHH
T ss_pred EECCCCHHHHHHHHH
Confidence 888887777666544
No 302
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.25 E-value=0.0097 Score=54.14 Aligned_cols=82 Identities=7% Similarity=0.031 Sum_probs=56.2
Q ss_pred ceEEEECC----ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 6 SHICCIGA----GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 6 ~~I~viG~----G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
.+|+|||+ |.+|..++..|.+ .|++ +|++|+.+ +. +
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~---------------------------~G~~--v~~Vnp~~-~~-------i--- 62 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLE---------------------------HGYD--VYPVNPKY-EE-------V--- 62 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHH---------------------------TTCE--EEEECTTC-SE-------E---
T ss_pred CEEEEEccCCCCCchHHHHHHHHHH---------------------------CCCE--EEEECCCC-Ce-------E---
Confidence 57999999 7999999999998 7887 55655542 10 0
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEE
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVE 154 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~ 154 (598)
.++.+..++.+.....|++++++|.+ .+.++++++.+... ..+++.
T Consensus 63 -----------~G~~~y~sl~~l~~~vDlvvi~vp~~---------------~~~~vv~~~~~~gi-~~i~~~ 108 (144)
T 2d59_A 63 -----------LGRKCYPSVLDIPDKIEVVDLFVKPK---------------LTMEYVEQAIKKGA-KVVWFQ 108 (144)
T ss_dssp -----------TTEECBSSGGGCSSCCSEEEECSCHH---------------HHHHHHHHHHHHTC-SEEEEC
T ss_pred -----------CCeeccCCHHHcCCCCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEEEC
Confidence 13555667776667899999998653 45666666665433 345443
No 303
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=96.09 E-value=0.0099 Score=62.28 Aligned_cols=94 Identities=9% Similarity=0.103 Sum_probs=68.9
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+|||....+.... .++.+..++.++++.
T Consensus 158 l~g~tvGIIGl----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~------------~g~~~~~~l~ell~~ 215 (352)
T 3gg9_A 158 LKGQTLGIFGY----------GKIGQLVAGYGRAFGMNVLVWGRENSKERARA------------DGFAVAESKDALFEQ 215 (352)
T ss_dssp CTTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSHHHHHHHHH------------TTCEECSSHHHHHHH
T ss_pred CCCCEEEEEeE----------CHHHHHHHHHHHhCCCEEEEECCCCCHHHHHh------------cCceEeCCHHHHHhh
Confidence 57899999998 36778899999999999999999743221111 133566789999999
Q ss_pred CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++... +-+++=-......|++..+++|+.+
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 99999998754 3333322345567887779999874
No 304
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.08 E-value=0.0023 Score=62.46 Aligned_cols=68 Identities=16% Similarity=0.307 Sum_probs=44.8
Q ss_pred CceEEEECCChhHHHHHHH--HHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSV--IALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~--la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
..+|+|||+|.+|..++.. +.. .|++++ ++|.|++++...-.|
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~---------------------------~g~~iVg~~D~dp~k~g~~i~g------- 130 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKN---------------------------NNTKISMAFDINESKIGTEVGG------- 130 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC---------------------------------CCEEEEEESCTTTTTCEETT-------
T ss_pred CCEEEEEccCHHHHHHHHHHhccc---------------------------CCcEEEEEEeCCHHHHHhHhcC-------
Confidence 3689999999999999984 223 567655 579998876532221
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
-.+...+++++.+++.|++++|+|+
T Consensus 131 -----------v~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 131 -----------VPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -----------EEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred -----------CeeechhhHHHHHHhCCEEEEecCc
Confidence 1233456777777666999999764
No 305
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.07 E-value=0.0096 Score=61.59 Aligned_cols=63 Identities=11% Similarity=0.160 Sum_probs=45.8
Q ss_pred CceEEEECCChhHH-HHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGG-PTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~-~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.+|. ..+..|... ++.+|+ ++|+++++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~--------------------------~~~~lvav~d~~~~~--------------- 63 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN--------------------------ANFKLVATASRHGTV--------------- 63 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC--------------------------TTEEEEEEECSSCCC---------------
T ss_pred CceEEEEecCHHHHHHHHHHHHhC--------------------------CCeEEEEEEeCChhh---------------
Confidence 36999999999998 678888771 466654 57777431
Q ss_pred hHHHHhhhcCCceEEecCHHHHhcc---CcEEEEecCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQK---AQLIFISVNTP 118 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~---adviii~v~tp 118 (598)
.++...+|+++.+++ .|+|+||+|+.
T Consensus 64 ----------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 64 ----------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp ----------TTSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred ----------cCCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 124467889888765 89999997643
No 306
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.06 E-value=0.018 Score=59.97 Aligned_cols=84 Identities=13% Similarity=0.220 Sum_probs=51.2
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHH-cCCCCCCCC-C
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWN-SNKLPIYEP-G 82 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~-~~~~~~~e~-~ 82 (598)
.||+|+|+|+||..++..|.. . ++.+|+ +.|+++++...+. +...+++.. .
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~-~-------------------------p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~ 55 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIK-Q-------------------------PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQ 55 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-C-------------------------TTEEEEEEECSSCSHHHHHHHHTTCCEECCGG
T ss_pred eEEEEEecCHHHHHHHHHHHc-C-------------------------CCCEEEEEEcCChHHHHHHHHhcCcceecCcC
Confidence 589999999999999998886 1 345554 3466644443332 222233221 2
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
.++++.. .++..+.++++...++|+||.|+|..
T Consensus 56 ~~~~~~~---~~v~v~~~~e~l~~~vDvV~~aTp~~ 88 (340)
T 1b7g_O 56 SIKKFEE---SGIPVAGTVEDLIKTSDIVVDTTPNG 88 (340)
T ss_dssp GHHHHHT---TTCCCCCCHHHHHHHCSEEEECCSTT
T ss_pred HHHHhcc---cccccccCHhHhhcCCCEEEECCCCc
Confidence 3333321 23445567776667899999996543
No 307
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.01 E-value=0.03 Score=56.87 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=36.0
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
.++|.|.|+ |++|..++..|++ .|++|++++++.++.+.+.
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLE---------------------------HGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHH---------------------------CCCEEEEEeCCcccHHHHH
Confidence 468999998 9999999999999 8999999999988766543
No 308
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.00 E-value=0.016 Score=59.03 Aligned_cols=90 Identities=16% Similarity=0.208 Sum_probs=68.3
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+|||.....+ ......++.++++.
T Consensus 120 l~g~tvGIIGl----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~~~l~ell~~ 173 (290)
T 3gvx_A 120 LYGKALGILGY----------GGIGRRVAHLAKAFGMRVIAYTRSSVDQN----------------VDVISESPADLFRQ 173 (290)
T ss_dssp CTTCEEEEECC----------SHHHHHHHHHHHHHTCEEEEECSSCCCTT----------------CSEECSSHHHHHHH
T ss_pred eecchheeecc----------CchhHHHHHHHHhhCcEEEEEeccccccc----------------cccccCChHHHhhc
Confidence 57899999998 46788999999999999999999754221 12345688999999
Q ss_pred CCEEEEEeec-cchhhccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEW-DEFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~-~~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|+++++. ++.+.+=-....+.|++..+++|..+
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aR 210 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVAR 210 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeeh
Confidence 9999999985 34444322455667887779998764
No 309
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.99 E-value=0.04 Score=60.22 Aligned_cols=113 Identities=16% Similarity=0.244 Sum_probs=69.4
Q ss_pred CCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH-HHHHHHcCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE-RIRQWNSNKLPIYE 80 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~-~~~~~~~~~~~~~e 80 (598)
+.++||.|||+|-.|.+ +|..|.+ .|++|+++|..+. ..+.|.+...+
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~---------------------------~G~~V~~~D~~~~~~~~~l~~~gi~--- 69 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLAN---------------------------EGYQISGSDLAPNSVTQHLTALGAQ--- 69 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHH---------------------------TTCEEEEECSSCCHHHHHHHHTTCE---
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHh---------------------------CCCeEEEEECCCCHHHHHHHHCCCE---
Confidence 34579999999999996 8999999 8999999997643 23344432111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHH-------HHHHHHHcCCCcEEE
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAA-------ARMIAEIATDNKIVV 153 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~ivv 153 (598)
+..-.+. +.+.++|+||++-.-|.+ .+.+...++. .+.+...++...+|.
T Consensus 70 --------------~~~g~~~-~~~~~~d~vV~Spgi~~~--------~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~Ia 126 (494)
T 4hv4_A 70 --------------IYFHHRP-ENVLDASVVVVSTAISAD--------NPEIVAAREARIPVIRRAEMLAELMRYRHGIA 126 (494)
T ss_dssp --------------EESSCCG-GGGTTCSEEEECTTSCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEE
T ss_pred --------------EECCCCH-HHcCCCCEEEECCCCCCC--------CHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEE
Confidence 1111233 246789999988444431 2222222221 233455555556888
Q ss_pred EecCCchHHHHHHHH
Q psy11160 154 EKSTVPVRAAESIMN 168 (598)
Q Consensus 154 ~~STv~~~~~~~~~~ 168 (598)
+..|---.||-++..
T Consensus 127 VTGTnGKTTTt~ml~ 141 (494)
T 4hv4_A 127 VAGTHGKTTTTAMLS 141 (494)
T ss_dssp EECSSSHHHHHHHHH
T ss_pred EecCCChHHHHHHHH
Confidence 888888777766554
No 310
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.99 E-value=0.013 Score=59.66 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=49.4
Q ss_pred CCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 3 QTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 3 ~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
++.+||+|+|+ |.+|...+..+.+ .|++ .++..|+.+. +.. +
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~---------------------------~g~~-~V~~V~p~~~-----g~~-~--- 47 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIA---------------------------YGTK-MVGGVTPGKG-----GTT-H--- 47 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH---------------------------HTCE-EEEEECTTCT-----TCE-E---
T ss_pred CCCCEEEEECCCChHHHHHHHHHHH---------------------------CCCe-EEEEeCCCcc-----cce-e---
Confidence 45679999999 9999999999888 5677 4445555321 100 0
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
.++....+++++.+ ++|++++++|.+
T Consensus 48 -----------~G~~vy~sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 48 -----------LGLPVFNTVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp -----------TTEEEESSHHHHHHHHCCCEEEECCCGG
T ss_pred -----------CCeeccCCHHHHhhcCCCCEEEEecCHH
Confidence 24667788888887 899999998765
No 311
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.96 E-value=0.0031 Score=65.25 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=46.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCH-HHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSE-ERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~-~~~~~~~~~~~~~~e~~ 82 (598)
++||+|||+|.+|...+..| . .+.+|+ ++|+++ ++.+.+.+-
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~---------------------------~~~~lvav~d~~~~~~~~~~~~~-------- 45 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-D---------------------------EECSITGIAPGVPEEDLSKLEKA-------- 45 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-C---------------------------TTEEEEEEECSSTTCCCHHHHHH--------
T ss_pred ceEEEEEccchhHHHHHHhc-C---------------------------CCcEEEEEecCCchhhHHHHHHH--------
Confidence 47999999998887555444 3 677776 478876 333333210
Q ss_pred hHHHHhhhcCCceEEecCHHHHhcc--CcEEEEecCCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQK--AQLIFISVNTP 118 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--adviii~v~tp 118 (598)
.++ ........+|+++.+++ .|+|+||+|+.
T Consensus 46 ----~~~-~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 46 ----ISE-MNIKPKKYNNWWEMLEKEKPDILVINTVFS 78 (337)
T ss_dssp ----HHT-TTCCCEECSSHHHHHHHHCCSEEEECSSHH
T ss_pred ----HHH-cCCCCcccCCHHHHhcCCCCCEEEEeCCcc
Confidence 000 00113567888888864 89999997654
No 312
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.92 E-value=0.018 Score=55.70 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=51.3
Q ss_pred CCceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC--CceEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP--NIQVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
++++|.|.| .|++|..++..|++ . |++|+++++++++.+.+..+. .+..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~---------------------------~~~g~~V~~~~r~~~~~~~~~~~~-~~~~ 54 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKE---------------------------GSDKFVAKGLVRSAQGKEKIGGEA-DVFI 54 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH---------------------------TTTTCEEEEEESCHHHHHHTTCCT-TEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh---------------------------cCCCcEEEEEEcCCCchhhcCCCe-eEEE
Confidence 357899998 59999999999999 6 899999999998877652211 1111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
-+ +.-..++.++++++|+||.+...
T Consensus 55 ~D------------~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 55 GD------------ITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CC------------TTSHHHHHHHHTTCSEEEECCCC
T ss_pred ec------------CCCHHHHHHHHcCCCEEEEeccc
Confidence 11 11012345567889999988753
No 313
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.92 E-value=0.0077 Score=60.62 Aligned_cols=72 Identities=10% Similarity=0.130 Sum_probs=51.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.+++.|+|+|-+|.+++..|++ .|.+|++++|++++.+.+.+..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~---------------------------~G~~v~v~~R~~~~a~~l~~~~--------- 162 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQ---------------------------AQQNIVLANRTFSKTKELAERF--------- 162 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHH---------------------------TTCEEEEEESSHHHHHHHHHHH---------
T ss_pred CCEEEEECCcHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHHHHc---------
Confidence 3689999999999999999999 7899999999999988776310
Q ss_pred HHHhhhcCCceEEecCHHHHh-c-cCcEEEEecCCCC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAI-Q-KAQLIFISVNTPT 119 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~-~adviii~v~tp~ 119 (598)
.. . ..+.. .+++ .+ + ++|+||.++|.+.
T Consensus 163 ---~~-~-~~~~~-~~~~-~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 163 ---QP-Y-GNIQA-VSMD-SIPLQTYDLVINATSAGL 192 (272)
T ss_dssp ---GG-G-SCEEE-EEGG-GCCCSCCSEEEECCCC--
T ss_pred ---cc-c-CCeEE-eeHH-HhccCCCCEEEECCCCCC
Confidence 00 0 01222 2333 34 3 8999999987653
No 314
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.91 E-value=0.02 Score=62.27 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=65.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.++++|+|+|.+|..+|..|+. .|.+|+++|+++++.......
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa---------------------------~GA~Viv~D~~~~~a~~Aa~~---------- 307 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQ---------------------------AGARVIVTEIDPICALQATME---------- 307 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHHHHHHHHT----------
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEcCCHHHHHHHHHh----------
Confidence 3689999999999999999999 799999999999887665431
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
... ..+.++++..+|+++.+.+++.- +. ....+.++++.+|++-+-
T Consensus 308 ---------g~d-v~~lee~~~~aDvVi~atG~~~v--------------l~---~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 308 ---------GLQ-VLTLEDVVSEADIFVTTTGNKDI--------------IM---LDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp ---------TCE-ECCGGGTTTTCSEEEECSSCSCS--------------BC---HHHHTTSCTTEEEEESSS
T ss_pred ---------CCc-cCCHHHHHHhcCEEEeCCCChhh--------------hh---HHHHHhcCCCeEEEEcCC
Confidence 112 24566778899999988654321 11 123456788888887654
No 315
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=95.87 E-value=0.019 Score=59.51 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=67.6
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||.....+....+ ++.+ .++.++++.
T Consensus 143 l~g~tvGIIG~----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~-----------g~~~-~~l~ell~~ 200 (330)
T 4e5n_A 143 LDNATVGFLGM----------GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRL-----------GLRQ-VACSELFAS 200 (330)
T ss_dssp STTCEEEEECC----------SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH-----------TEEE-CCHHHHHHH
T ss_pred cCCCEEEEEee----------CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc-----------Ccee-CCHHHHHhh
Confidence 46899999998 3677889999999999999999986322222211 1233 478899999
Q ss_pred CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|+++.... +.+++=-......|++..+++|+.+
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence 99999998864 3333322445667887779998764
No 316
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.85 E-value=0.025 Score=59.57 Aligned_cols=93 Identities=18% Similarity=0.203 Sum_probs=66.7
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|||+|+ ..-...+++.|...|.+|.+|||....+.... . ++. ..++.++++.
T Consensus 174 l~gktvGIIGl----------G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~--------~----g~~-~~~l~ell~~ 230 (365)
T 4hy3_A 174 IAGSEIGIVGF----------GDLGKALRRVLSGFRARIRVFDPWLPRSMLEE--------N----GVE-PASLEDVLTK 230 (365)
T ss_dssp SSSSEEEEECC----------SHHHHHHHHHHTTSCCEEEEECSSSCHHHHHH--------T----TCE-ECCHHHHHHS
T ss_pred cCCCEEEEecC----------CcccHHHHHhhhhCCCEEEEECCCCCHHHHhh--------c----Cee-eCCHHHHHhc
Confidence 57999999998 36778999999999999999999864432221 1 223 3588999999
Q ss_pred CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++... +-+++=-....+.|++..+++|+.+
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aR 267 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSR 267 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSC
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcC
Confidence 99999987754 2333222344567887779999873
No 317
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.85 E-value=0.11 Score=52.76 Aligned_cols=166 Identities=15% Similarity=0.156 Sum_probs=98.5
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+++.+|+++|- |. .....++.|.+.|++|.++.. +.++.. ..+..+..+..+.+++
T Consensus 5 ~~~mki~v~~~-------~~---~~~~~~~~L~~~g~~v~~~~~--~~~~~~------------~~g~~~~~~~~~~~~~ 60 (300)
T 2rir_A 5 LTGLKIAVIGG-------DA---RQLEIIRKLTEQQADIYLVGF--DQLDHG------------FTGAVKCNIDEIPFQQ 60 (300)
T ss_dssp CCSCEEEEESB-------CH---HHHHHHHHHHHTTCEEEEESC--TTSSCC------------CTTEEECCGGGSCGGG
T ss_pred ccCCEEEEECC-------CH---HHHHHHHHHHhCCCEEEEEec--cccccc------------cccceeccchHHHHhc
Confidence 35678999974 22 455678999999999988742 111100 0122345556777889
Q ss_pred CCEEEEE---eec-----cch--hh--ccHHHHHhccCCCcEEEecCCCCC-hhhhhhccceeeeccchhhh---HHHHH
Q psy11160 472 THAIVVC---TEW-----DEF--VT--LDYKRIYEGMMKPAYIFDGRKILN-HDALLDIGFNVHTVIDLNEY---QKTRF 535 (598)
Q Consensus 472 adalii~---t~~-----~~f--~~--ld~~~l~~~m~~~~iI~D~r~i~d-~~~~~~~G~~y~~v~~iN~~---~~~~~ 535 (598)
+|++++. ... .-+ .. ++-+ +.+.+.+-++|+-+.+-.| .+.+.+.|+.+......|.. ++-..
T Consensus 61 ~d~ii~~~~~~~~~~~i~s~~a~~~~~~~~~-~l~~~~~l~~i~~g~~~~d~~~~~~~~gi~v~~~~~~~~v~~~r~~~~ 139 (300)
T 2rir_A 61 IDSIILPVSATTGEGVVSTVFSNEEVVLKQD-HLDRTPAHCVIFSGISNAYLENIAAQAKRKLVKLFERDDIAIYNSIPT 139 (300)
T ss_dssp CSEEECCSSCEETTTEECBSSCSSCEECCHH-HHHTSCTTCEEEESSCCHHHHHHHHHTTCCEEEGGGSHHHHHHHHHHH
T ss_pred CCEEEeccccccCCcccccccccCCccchHH-HHhhcCCCCEEEEecCCHHHHHHHHHCCCEEEeecCCCceEEEcCccH
Confidence 9998872 110 000 01 2333 3344555557875555556 66777888866544433311 11000
Q ss_pred HHHHH----HHhcCCCCCCEEEEEeeecCCCCCCcCCCchHHHHHHHHhCCCEEEEECCCC
Q psy11160 536 SEKII----SSLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKL 592 (598)
Q Consensus 536 ~~~i~----~~~~~~~~~~~i~v~GlafK~~~~d~R~sp~~~i~~~l~~~g~~v~~~DP~~ 592 (598)
.+-.+ ...+.++.+++|+|+|+.- -...+++.|...|++|.+|||..
T Consensus 140 ~~g~~~~~~~~~~~~l~g~~v~IiG~G~----------iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 140 VEGTIMLAIQHTDYTIHGSQVAVLGLGR----------TGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp HHHHHHHHHHTCSSCSTTSEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESSH
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcccH----------HHHHHHHHHHHCCCEEEEEECCH
Confidence 11111 1234578899999999742 44788999999999999999864
No 318
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.85 E-value=0.006 Score=63.55 Aligned_cols=21 Identities=29% Similarity=0.351 Sum_probs=19.6
Q ss_pred ceEEEECCChhHHHHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~ 26 (598)
+||+|+|+|++|..++..|..
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~ 22 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQ 22 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHT
T ss_pred eEEEEEeECHHHHHHHHHHHc
Confidence 689999999999999999887
No 319
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.83 E-value=0.0023 Score=64.00 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=32.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
+|+|.|.|+|++|..++..|.+ .|++|+++++++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA---------------------------QGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCccc
Confidence 4789999999999999999999 89999999998654
No 320
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.83 E-value=0.019 Score=58.36 Aligned_cols=22 Identities=14% Similarity=0.158 Sum_probs=18.9
Q ss_pred CceEEEECCChhHHHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~ 26 (598)
++||+|||+|.+|...+..+..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~ 28 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKD 28 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTS
T ss_pred cceEEEEEEcHHHHHHHHHHhc
Confidence 5799999999999988877754
No 321
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=95.83 E-value=0.031 Score=59.39 Aligned_cols=96 Identities=14% Similarity=0.139 Sum_probs=69.0
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|+|+|+ ..-...+++.|...|.+|.+|||.....+....+ ++....++.++++
T Consensus 188 ~l~gktvGIIGl----------G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~-----------G~~~~~~l~ell~ 246 (393)
T 2nac_A 188 DLEAMHVGTVAA----------GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL-----------NLTWHATREDMYP 246 (393)
T ss_dssp CCTTCEEEEECC----------SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH-----------TCEECSSHHHHGG
T ss_pred cCCCCEEEEEeE----------CHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhc-----------CceecCCHHHHHh
Confidence 357899999998 3678899999999999999999976433322211 2234467889999
Q ss_pred CCCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 471 NTHAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 471 ~adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
.+|+|+++.... +.+++=-......|++..+++|..+
T Consensus 247 ~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 247 VCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp GCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred cCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence 999999998864 3344321344567777778888765
No 322
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.81 E-value=0.0088 Score=59.74 Aligned_cols=73 Identities=12% Similarity=0.140 Sum_probs=50.0
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-CceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|+|.|.|+ |++|..++..|++ . |++|+++++++++...+......+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~---------------------------~~g~~V~~~~R~~~~~~~~~~~~v~~~~--- 50 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIA---------------------------NHIDHFHIGVRNVEKVPDDWRGKVSVRQ--- 50 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHH---------------------------TTCTTEEEEESSGGGSCGGGBTTBEEEE---
T ss_pred CEEEEEcCCchHHHHHHHHHhh---------------------------CCCCcEEEEECCHHHHHHhhhCCCEEEE---
Confidence 58999995 9999999999988 5 89999999998876544322111100
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
..+.-..++.++++++|+||.+.+.
T Consensus 51 ---------~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 51 ---------LDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp ---------CCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred ---------cCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 0111112345678899999988653
No 323
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.80 E-value=0.017 Score=58.01 Aligned_cols=99 Identities=10% Similarity=0.007 Sum_probs=64.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.+++.|+|+|-+|.++|..|++ .|.+|+++++++++.+.+.+...
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~---------------------------~G~~V~v~~R~~~~~~~la~~~~-------- 163 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLS---------------------------LDCAVTITNRTVSRAEELAKLFA-------- 163 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSHHHHHHHHHHTG--------
T ss_pred CCEEEEECCcHHHHHHHHHHHH---------------------------cCCEEEEEECCHHHHHHHHHHhh--------
Confidence 3689999999999999999999 78999999999999887763210
Q ss_pred HHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
. . ..+.. .+.++.. ..+|+||.++|.+...+ .+++. ...++++.+|++.++.|.
T Consensus 164 ----~-~-~~~~~-~~~~~~~~~~~DivVn~t~~~~~~~------~~~i~---------~~~l~~~~~v~D~~y~p~ 218 (271)
T 1nyt_A 164 ----H-T-GSIQA-LSMDELEGHEFDLIINATSSGISGD------IPAIP---------SSLIHPGIYCYDMFYQKG 218 (271)
T ss_dssp ----G-G-SSEEE-CCSGGGTTCCCSEEEECCSCGGGTC------CCCCC---------GGGCCTTCEEEESCCCSS
T ss_pred ----c-c-CCeeE-ecHHHhccCCCCEEEECCCCCCCCC------CCCCC---------HHHcCCCCEEEEeccCCc
Confidence 0 0 01222 2332222 48999999987643210 01110 012457788888877754
No 324
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.79 E-value=0.021 Score=59.58 Aligned_cols=90 Identities=11% Similarity=0.213 Sum_probs=63.7
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|+|+|+ ..-+..+++.|...|.+|.+|||...... ......++.++++
T Consensus 168 ~l~gktiGIIGl----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~~sl~ell~ 221 (340)
T 4dgs_A 168 SPKGKRIGVLGL----------GQIGRALASRAEAFGMSVRYWNRSTLSGV----------------DWIAHQSPVDLAR 221 (340)
T ss_dssp CCTTCEEEEECC----------SHHHHHHHHHHHTTTCEEEEECSSCCTTS----------------CCEECSSHHHHHH
T ss_pred cccCCEEEEECC----------CHHHHHHHHHHHHCCCEEEEEcCCccccc----------------CceecCCHHHHHh
Confidence 357999999998 36788999999999999999999654210 2245678999999
Q ss_pred CCCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 471 NTHAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 471 ~adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
.+|+|++++... +-+. ++ ....+.|++..+++|..+
T Consensus 222 ~aDvVil~vP~t~~t~~li~-~~~l~~mk~gailIN~aR 259 (340)
T 4dgs_A 222 DSDVLAVCVAASAATQNIVD-ASLLQALGPEGIVVNVAR 259 (340)
T ss_dssp TCSEEEECC----------C-HHHHHHTTTTCEEEECSC
T ss_pred cCCEEEEeCCCCHHHHHHhh-HHHHhcCCCCCEEEECCC
Confidence 999999998743 2233 23 334556777778888754
No 325
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.78 E-value=0.03 Score=56.41 Aligned_cols=75 Identities=19% Similarity=0.322 Sum_probs=58.3
Q ss_pred CceEEEECCC-hhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAG-YVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G-~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.| .||.++|..|.. .|..|+++++.
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~---------------------------~gAtVtv~~~~------------------- 183 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLN---------------------------RNYTVSVCHSK------------------- 183 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHH---------------------------TTCEEEEECTT-------------------
T ss_pred CCEEEEEcCChHHHHHHHHHHHH---------------------------CCCeEEEEeCC-------------------
Confidence 3689999997 599999999999 78999999742
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
|.++++.+++||+||.+++.|..- . ...++++.+|++-++-+
T Consensus 184 --------------t~~L~~~~~~ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 184 --------------TKDIGSMTRSSKIVVVAVGRPGFL---------N-----------REMVTPGSVVIDVGINY 225 (276)
T ss_dssp --------------CSCHHHHHHHSSEEEECSSCTTCB---------C-----------GGGCCTTCEEEECCCEE
T ss_pred --------------cccHHHhhccCCEEEECCCCCccc---------c-----------HhhccCCcEEEEeccCc
Confidence 245677899999999999876310 0 12358999999877654
No 326
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.75 E-value=0.019 Score=57.86 Aligned_cols=75 Identities=12% Similarity=0.186 Sum_probs=51.2
Q ss_pred CCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC-----HHHHHHHH---cC
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS-----EERIRQWN---SN 74 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~-----~~~~~~~~---~~ 74 (598)
.+|+|.|.|+ |++|..++..|.+ .|++|++++|+ +++.+.+. ..
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~~~~~~~~~~~~~~~ 55 (313)
T 1qyd_A 3 KKSRVLIVGGTGYIGKRIVNASIS---------------------------LGHPTYVLFRPEVVSNIDKVQMLLYFKQL 55 (313)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHH---------------------------TTCCEEEECCSCCSSCHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh---------------------------CCCcEEEEECCCcccchhHHHHHHHHHhC
Confidence 3578999995 9999999999999 89999999998 55654432 11
Q ss_pred CCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 75 KLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 75 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
...+.. ..+.-..++.++++++|+||.+.+.
T Consensus 56 ~~~~~~------------~D~~d~~~l~~~~~~~d~vi~~a~~ 86 (313)
T 1qyd_A 56 GAKLIE------------ASLDDHQRLVDALKQVDVVISALAG 86 (313)
T ss_dssp TCEEEC------------CCSSCHHHHHHHHTTCSEEEECCCC
T ss_pred CeEEEe------------CCCCCHHHHHHHHhCCCEEEECCcc
Confidence 111110 1111112355678899999998754
No 327
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.75 E-value=0.095 Score=51.97 Aligned_cols=21 Identities=29% Similarity=0.465 Sum_probs=19.0
Q ss_pred ceEEEECC-ChhHHHHHHHHHH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~ 26 (598)
|||+|+|+ |.||..++..+..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~ 22 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAA 22 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHh
Confidence 58999997 9999999998876
No 328
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.75 E-value=0.016 Score=57.67 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=30.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~ 65 (598)
++|.|||+|-+|..+|..|+. .|. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~---------------------------~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLAS---------------------------AGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHH---------------------------cCCCeEEEEcCCC
Confidence 689999999999999999999 675 899999987
No 329
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=95.72 E-value=0.029 Score=58.62 Aligned_cols=95 Identities=12% Similarity=0.181 Sum_probs=69.0
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|+|+|+ ..-+..+++.|...|.+|.+|||...... ...+ ++....++.++++
T Consensus 165 ~l~g~tvGIIG~----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~-----------g~~~~~~l~ell~ 222 (347)
T 1mx3_A 165 RIRGETLGIIGL----------GRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERAL-----------GLQRVSTLQDLLF 222 (347)
T ss_dssp CCTTCEEEEECC----------SHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHH-----------TCEECSSHHHHHH
T ss_pred CCCCCEEEEEeE----------CHHHHHHHHHHHHCCCEEEEECCCcchhh-Hhhc-----------CCeecCCHHHHHh
Confidence 357899999998 36778899999999999999999765322 1111 1244567889999
Q ss_pred CCCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCCC
Q psy11160 471 NTHAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRKI 508 (598)
Q Consensus 471 ~adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~i 508 (598)
.+|+|++++... +.++ ++ ....+.|++..+++|..+.
T Consensus 223 ~aDvV~l~~P~t~~t~~li~-~~~l~~mk~gailIN~arg 261 (347)
T 1mx3_A 223 HSDCVTLHCGLNEHNHHLIN-DFTVKQMRQGAFLVNTARG 261 (347)
T ss_dssp HCSEEEECCCCCTTCTTSBS-HHHHTTSCTTEEEEECSCT
T ss_pred cCCEEEEcCCCCHHHHHHhH-HHHHhcCCCCCEEEECCCC
Confidence 999999998764 3444 34 3445677777788887663
No 330
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.72 E-value=0.0088 Score=61.04 Aligned_cols=73 Identities=11% Similarity=0.208 Sum_probs=47.4
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+|+|.|.|+ |++|..++..|++ .|++|+++++++.+.+.+......+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~~~l~~~~~~~~~--- 62 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRA---------------------------AGHDLVLIHRPSSQIQRLAYLEPECRV--- 62 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH---------------------------TTCEEEEEECTTSCGGGGGGGCCEEEE---
T ss_pred CCEEEEECCCcHHHHHHHHHHHH---------------------------CCCEEEEEecChHhhhhhccCCeEEEE---
Confidence 468999995 9999999999999 899999999987654433221000000
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
..+.-..++.++++++|+||-+..
T Consensus 63 ---------~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 63 ---------AEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp ---------CCTTCHHHHHHHTTTCSEEEEC--
T ss_pred ---------ecCCCHHHHHHHHcCCCEEEECCc
Confidence 001101224456788999998875
No 331
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=95.70 E-value=0.035 Score=57.94 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=68.9
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHH-HcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLL-YEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTV 469 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~-~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 469 (598)
.+.+++|+|+|+ ..-+..+++.|. ..|.+|.+|||.....+....+ ++.+..++.+++
T Consensus 160 ~l~g~~vgIIG~----------G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~-----------g~~~~~~l~ell 218 (348)
T 2w2k_A 160 NPRGHVLGAVGL----------GAIQKEIARKAVHGLGMKLVYYDVAPADAETEKAL-----------GAERVDSLEELA 218 (348)
T ss_dssp CSTTCEEEEECC----------SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-----------TCEECSSHHHHH
T ss_pred CCCCCEEEEEEE----------CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc-----------CcEEeCCHHHHh
Confidence 467899999998 357789999999 9999999999976433222111 124445788889
Q ss_pred cCCCEEEEEeeccc-hhhccHHHHHhccCCCcEEEecCCC
Q psy11160 470 KNTHAIVVCTEWDE-FVTLDYKRIYEGMMKPAYIFDGRKI 508 (598)
Q Consensus 470 ~~adalii~t~~~~-f~~ld~~~l~~~m~~~~iI~D~r~i 508 (598)
+.+|+|++++.... .+++=-..+...|++..+++|..+.
T Consensus 219 ~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg 258 (348)
T 2w2k_A 219 RRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARG 258 (348)
T ss_dssp HHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred ccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 99999999998753 4443223444567776788887664
No 332
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.66 E-value=0.0062 Score=62.90 Aligned_cols=68 Identities=10% Similarity=0.154 Sum_probs=49.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCC-C-CCCh
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPI-Y-EPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~-~-e~~~ 83 (598)
++|.|+|+|.+|..++..|.+ .|+ |+++|+|+++++ +.+...+. + ++.-
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~---------------------------~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~ 166 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRG---------------------------SEV-FVLAEDENVRKK-VLRSGANFVHGDPTR 166 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGG---------------------------SCE-EEEESCGGGHHH-HHHTTCEEEESCTTS
T ss_pred CCEEEECCcHHHHHHHHHHHh---------------------------CCc-EEEEeCChhhhh-HHhCCcEEEEeCCCC
Confidence 589999999999999999988 789 999999999998 76422211 1 1111
Q ss_pred HHHHhhhcCCceEEecCHHHH-hccCcEEEEecC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSA-IQKAQLIFISVN 116 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~-~~~adviii~v~ 116 (598)
++ .++++ +++||.++++++
T Consensus 167 ~~--------------~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 167 VS--------------DLEKANVRGARAVIVDLE 186 (336)
T ss_dssp HH--------------HHHHTCSTTEEEEEECCS
T ss_pred HH--------------HHHhcChhhccEEEEcCC
Confidence 11 12233 678999999864
No 333
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.66 E-value=0.038 Score=57.43 Aligned_cols=22 Identities=14% Similarity=0.072 Sum_probs=20.0
Q ss_pred CceEEEECCChhHHHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~ 26 (598)
+.||+|+|+|++|..+++.|..
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~ 24 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFN 24 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH
T ss_pred ceEEEEEccCHHHHHHHHHHHc
Confidence 3699999999999999999877
No 334
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.64 E-value=0.035 Score=59.91 Aligned_cols=79 Identities=16% Similarity=0.271 Sum_probs=51.2
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIY 79 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~ 79 (598)
||+ ..+|+|||+|.||..++..|...- ..+.+++ +.+.+|+ ++|+++++.+.+..+
T Consensus 7 MMk-~irIgIIG~G~VG~~~~~~L~~~~-----~~l~~~~------------g~~i~lvaV~d~~~~~~~~~~~~----- 63 (444)
T 3mtj_A 7 GMK-PIHVGLLGLGTVGGGTLTVLRRNA-----EEITRRA------------GREIRVVRAAVRNLDKAEALAGG----- 63 (444)
T ss_dssp SCS-CEEEEEECCHHHHHHHHHHHHHTH-----HHHHHHH------------SSCEEEEEEECSCHHHHHHHHTT-----
T ss_pred hhC-cccEEEECCCHHHHHHHHHHHHhH-----HHHHHhc------------CCCEEEEEEEECCHHHhhhhccc-----
Confidence 443 358999999999999998876510 0011111 1345544 578998887665211
Q ss_pred CCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCC
Q psy11160 80 EPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNT 117 (598)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~t 117 (598)
..+++|+++.++ +.|+|++|+|+
T Consensus 64 ---------------~~~~~d~~ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 64 ---------------LPLTTNPFDVVDDPEIDIVVELIGG 88 (444)
T ss_dssp ---------------CCEESCTHHHHTCTTCCEEEECCCS
T ss_pred ---------------CcccCCHHHHhcCCCCCEEEEcCCC
Confidence 235678888776 47999999775
No 335
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.62 E-value=0.021 Score=57.38 Aligned_cols=33 Identities=18% Similarity=0.389 Sum_probs=30.6
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
|||.|.|+ |++|..++..|.+ .||+|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~---------------------------~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNA---------------------------RGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHH---------------------------CCCEEEEEECCC
Confidence 69999998 9999999999999 899999999864
No 336
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=95.62 E-value=0.027 Score=58.52 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=69.5
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||....... . . ++.+ .++.++++.
T Consensus 139 l~g~tvgIiG~----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-~-----------g~~~-~~l~ell~~ 194 (334)
T 2pi1_A 139 LNRLTLGVIGT----------GRIGSRVAMYGLAFGMKVLCYDVVKREDLK-E-K-----------GCVY-TSLDELLKE 194 (334)
T ss_dssp GGGSEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCHHHH-H-T-----------TCEE-CCHHHHHHH
T ss_pred ccCceEEEECc----------CHHHHHHHHHHHHCcCEEEEECCCcchhhH-h-c-----------Ccee-cCHHHHHhh
Confidence 36899999998 367789999999999999999998754421 1 0 1233 358899999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC--CCChhh
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK--ILNHDA 513 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~~ 513 (598)
+|+|++++... +-++ ++- ...+.|++..+++|+.+ +.|.+.
T Consensus 195 aDvV~l~~P~t~~t~~li~~-~~l~~mk~gailIN~aRg~~vd~~a 239 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINE-ERISLMKDGVYLINTARGKVVDTDA 239 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCH-HHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred CCEEEEeCCCChHHHHhhCH-HHHhhCCCCcEEEECCCCcccCHHH
Confidence 99999998863 3333 343 44556877779999765 345433
No 337
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.61 E-value=0.012 Score=60.83 Aligned_cols=37 Identities=16% Similarity=0.437 Sum_probs=33.4
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS 64 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 64 (598)
||++...|+|||.|.+|+++|..|++ .|++|+++|+.
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~---------------------------~G~~V~vle~~ 38 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILAR---------------------------KGYSVHILARD 38 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHh---------------------------CCCEEEEEecc
Confidence 67777899999999999999999999 78999999874
No 338
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.60 E-value=0.025 Score=57.09 Aligned_cols=101 Identities=9% Similarity=0.031 Sum_probs=67.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+++.|+|+|-+|.+++..|++ .|. +|++++|++++.+.+.+....
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~---------------------------~G~~~v~i~~R~~~~a~~la~~~~~------ 166 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ---------------------------AGPSELVIANRDMAKALALRNELDH------ 166 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH---------------------------TCCSEEEEECSCHHHHHHHHHHHCC------
T ss_pred CCEEEEECccHHHHHHHHHHHH---------------------------cCCCEEEEEeCCHHHHHHHHHHhcc------
Confidence 3689999999999999999999 785 999999999999887642100
Q ss_pred HHHHhhhcCCceEEecCHHHHh-ccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAI-QKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRA 162 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~ 162 (598)
.++.+. ++++.- .++|+||-|+|.....+ .+.+. ...++++.+|++....|..|
T Consensus 167 ---------~~~~~~-~~~~l~~~~~DivInaTp~gm~~~------~~~i~---------~~~l~~~~~V~DlvY~P~~T 221 (272)
T 3pwz_A 167 ---------SRLRIS-RYEALEGQSFDIVVNATSASLTAD------LPPLP---------ADVLGEAALAYELAYGKGLT 221 (272)
T ss_dssp ---------TTEEEE-CSGGGTTCCCSEEEECSSGGGGTC------CCCCC---------GGGGTTCSEEEESSCSCCSC
T ss_pred ---------CCeeEe-eHHHhcccCCCEEEECCCCCCCCC------CCCCC---------HHHhCcCCEEEEeecCCCCC
Confidence 012221 122111 68999999976543211 11110 12467889999988876554
Q ss_pred H
Q psy11160 163 A 163 (598)
Q Consensus 163 ~ 163 (598)
.
T Consensus 222 ~ 222 (272)
T 3pwz_A 222 P 222 (272)
T ss_dssp H
T ss_pred H
Confidence 3
No 339
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=95.59 E-value=0.04 Score=57.95 Aligned_cols=95 Identities=17% Similarity=0.239 Sum_probs=68.3
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCe-EEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAK-LKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTV 469 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 469 (598)
.+.+++|+|+|+ ..-+..+++.|...|.+ |.+||+.....+....+ ++....++.+++
T Consensus 161 ~l~g~tvgIIG~----------G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~-----------g~~~~~~l~ell 219 (364)
T 2j6i_A 161 DIEGKTIATIGA----------GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKV-----------GARRVENIEELV 219 (364)
T ss_dssp CSTTCEEEEECC----------SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHT-----------TEEECSSHHHHH
T ss_pred cCCCCEEEEECc----------CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhc-----------CcEecCCHHHHH
Confidence 357999999998 36788999999999997 99999865433222211 234446788999
Q ss_pred cCCCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 470 KNTHAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 470 ~~adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+.+|+|++++... +.++ ++ ......|++..+++|..+
T Consensus 220 ~~aDvV~l~~P~t~~t~~li~-~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 220 AQADIVTVNAPLHAGTKGLIN-KELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp HTCSEEEECCCCSTTTTTCBC-HHHHTTSCTTEEEEECSC
T ss_pred hcCCEEEECCCCChHHHHHhC-HHHHhhCCCCCEEEECCC
Confidence 9999999999875 3333 33 344566777678888765
No 340
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.59 E-value=0.025 Score=57.88 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=71.9
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCE
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHA 474 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ada 474 (598)
+||+++|| ......+++.|.+.|++|.+||.-.... +.+.. . +...+.++.++++.+|+
T Consensus 4 ~kIgfIGl----------G~MG~~mA~~L~~~G~~v~v~dr~~~~~---~~l~~----~----Ga~~a~s~~e~~~~~dv 62 (300)
T 3obb_A 4 KQIAFIGL----------GHMGAPMATNLLKAGYLLNVFDLVQSAV---DGLVA----A----GASAARSARDAVQGADV 62 (300)
T ss_dssp CEEEEECC----------STTHHHHHHHHHHTTCEEEEECSSHHHH---HHHHH----T----TCEECSSHHHHHTTCSE
T ss_pred CEEEEeee----------hHHHHHHHHHHHhCCCeEEEEcCCHHHH---HHHHH----c----CCEEcCCHHHHHhcCCc
Confidence 58999998 3678899999999999999999753221 11211 1 34678999999999999
Q ss_pred EEEEeeccch-hhc--cHHHHHhccCCCcEEEecCCCCCh------hhhhhccceee
Q psy11160 475 IVVCTEWDEF-VTL--DYKRIYEGMMKPAYIFDGRKILNH------DALLDIGFNVH 522 (598)
Q Consensus 475 lii~t~~~~f-~~l--d~~~l~~~m~~~~iI~D~r~i~d~------~~~~~~G~~y~ 522 (598)
++++...+.- ++. ....+...+.+..+|+|...+-.. +.+.+.|+.|-
T Consensus 63 v~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 63 VISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp EEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred eeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9998766541 111 011123334455699999988632 44456777663
No 341
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.58 E-value=0.011 Score=59.48 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=50.4
Q ss_pred CCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC------HHHHHHHH---
Q psy11160 3 QTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS------EERIRQWN--- 72 (598)
Q Consensus 3 ~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~------~~~~~~~~--- 72 (598)
+++++|.|.|+ |++|..++..|.+ .|++|++++|+ +++.+.+.
T Consensus 2 ~~~~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~l~R~~~~~~~~~~~~~~~~l~ 54 (308)
T 1qyc_A 2 GSRSRILLIGATGYIGRHVAKASLD---------------------------LGHPTFLLVRESTASSNSEKAQLLESFK 54 (308)
T ss_dssp CCCCCEEEESTTSTTHHHHHHHHHH---------------------------TTCCEEEECCCCCTTTTHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh---------------------------CCCCEEEEECCcccccCHHHHHHHHHHH
Confidence 33578999997 9999999999999 89999999997 44544332
Q ss_pred cCCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 73 SNKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 73 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
.....+.. ..+.-..++.++++++|+||.+.+.
T Consensus 55 ~~~v~~v~------------~D~~d~~~l~~~~~~~d~vi~~a~~ 87 (308)
T 1qyc_A 55 ASGANIVH------------GSIDDHASLVEAVKNVDVVISTVGS 87 (308)
T ss_dssp TTTCEEEC------------CCTTCHHHHHHHHHTCSEEEECCCG
T ss_pred hCCCEEEE------------eccCCHHHHHHHHcCCCEEEECCcc
Confidence 11111111 1111112345678899999998753
No 342
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.58 E-value=0.027 Score=60.05 Aligned_cols=41 Identities=22% Similarity=0.399 Sum_probs=36.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC---ceEEEEeCCHHHHHHHHc
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN---IQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~v~~~d~~~~~~~~~~~ 73 (598)
+||+|+|+|++|..++..|++ .| .+|+++|++.++.+.+.+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~---------------------------~g~~~~~V~v~~r~~~~~~~la~ 45 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM---------------------------NREVFSHITLASRTLSKCQEIAQ 45 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT---------------------------CTTTCCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh---------------------------CCCCceEEEEEECCHHHHHHHHH
Confidence 689999999999999999998 56 399999999999887653
No 343
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.57 E-value=0.043 Score=55.99 Aligned_cols=75 Identities=17% Similarity=0.326 Sum_probs=58.2
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..+++|||.|. ||.++|..|.. .|..|+++++.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~---------------------------~gAtVtv~hs~------------------- 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLW---------------------------NNATVTTCHSK------------------- 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHH---------------------------TTCEEEEECTT-------------------
T ss_pred CCEEEEECCCchHHHHHHHHHHh---------------------------CCCeEEEEECC-------------------
Confidence 36899999995 89999999999 78899999732
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
+.++.+.+++||+||.+++.|.-- . ...++++.+||+-++-+
T Consensus 199 --------------t~~L~~~~~~ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 199 --------------TAHLDEEVNKGDILVVATGQPEMV---------K-----------GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp --------------CSSHHHHHTTCSEEEECCCCTTCB---------C-----------GGGSCTTCEEEECCCBC
T ss_pred --------------cccHHHHhccCCEEEECCCCcccC---------C-----------HHHcCCCcEEEEccCCC
Confidence 346677899999999999887310 0 12357899999877754
No 344
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.48 E-value=0.026 Score=58.41 Aligned_cols=92 Identities=8% Similarity=0.118 Sum_probs=66.3
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+|||.....+. + . ......++.++++.
T Consensus 135 l~gktvGIiGl----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~--------~--~~~~~~~l~ell~~ 191 (324)
T 3evt_A 135 LTGQQLLIYGT----------GQIGQSLAAKASALGMHVIGVNTTGHPADH---F--------H--ETVAFTATADALAT 191 (324)
T ss_dssp STTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEEESSCCCCTT---C--------S--EEEEGGGCHHHHHH
T ss_pred ccCCeEEEECc----------CHHHHHHHHHHHhCCCEEEEECCCcchhHh---H--------h--hccccCCHHHHHhh
Confidence 57899999998 467889999999999999999986532211 0 0 11234678899999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++... +-++ ++ ....+.|++..+++|..+
T Consensus 192 aDvV~l~lPlt~~t~~li~-~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFS-TELFQQTKQQPMLINIGR 228 (324)
T ss_dssp CSEEEECCCCCGGGTTCBS-HHHHHTCCSCCEEEECSC
T ss_pred CCEEEEcCCCchHHHHhcC-HHHHhcCCCCCEEEEcCC
Confidence 99999998753 3333 34 344556877778988764
No 345
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.46 E-value=0.017 Score=57.47 Aligned_cols=73 Identities=12% Similarity=0.175 Sum_probs=49.7
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC--CceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP--NIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
|+|.|.|+ |++|..++..|.+ . |++|+++++++++.+.+......+..-+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~---------------------------~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D 53 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLK---------------------------KVPASQIIAIVRNVEKASTLADQGVEVRHGD 53 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTT---------------------------TSCGGGEEEEESCTTTTHHHHHTTCEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHH---------------------------hCCCCeEEEEEcCHHHHhHHhhcCCeEEEec
Confidence 47899997 9999999999998 6 8999999999877665542211111000
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
+.-..++.++++++|+||.+...
T Consensus 54 ------------~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 54 ------------YNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp ------------TTCHHHHHHHTTTCSEEEECCCC
T ss_pred ------------cCCHHHHHHHHhcCCEEEEcCCC
Confidence 11112345567889999988653
No 346
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.46 E-value=0.046 Score=56.40 Aligned_cols=94 Identities=12% Similarity=0.134 Sum_probs=67.8
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCC-CCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDP-KVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+||| ....+.. ..+ ++.+..++.++++
T Consensus 144 l~g~~vgIIG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~-~~~-----------g~~~~~~l~ell~ 201 (320)
T 1gdh_A 144 LDNKTLGIYGF----------GSIGQALAKRAQGFDMDIDYFDTHRASSSDE-ASY-----------QATFHDSLDSLLS 201 (320)
T ss_dssp CTTCEEEEECC----------SHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-HHH-----------TCEECSSHHHHHH
T ss_pred CCCCEEEEECc----------CHHHHHHHHHHHHCCCEEEEECCCCcChhhh-hhc-----------CcEEcCCHHHHHh
Confidence 47899999998 36778899999999999999999 7654321 111 2244557889999
Q ss_pred CCCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 471 NTHAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 471 ~adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
.+|+|++++... +.+++=-....+.|++..+++|...
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 999999999864 3444211344566777778888765
No 347
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.43 E-value=0.012 Score=55.68 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.9
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS 64 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 64 (598)
..|+|||+|..|+++|..|++ .|++|+++|++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~---------------------------~G~~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA---------------------------AGHQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH---------------------------CCCCEEEEECC
Confidence 469999999999999999999 89999999985
No 348
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.42 E-value=0.034 Score=57.97 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=66.4
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+|||....+ ... ...+. ++.++++.
T Consensus 146 l~gktvgIiGl----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-------------~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 146 IYNLTVGLIGV----------GHIGSAVAEIFSAMGAKVIAYDVAYNPE-FEP-------------FLTYT-DFDTVLKE 200 (343)
T ss_dssp GGGSEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCGG-GTT-------------TCEEC-CHHHHHHH
T ss_pred cCCCeEEEEec----------CHHHHHHHHHHhhCCCEEEEECCChhhh-hhc-------------ccccc-CHHHHHhc
Confidence 46899999998 3677889999999999999999986532 110 12333 88999999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++... +-+. ++- .....|++..+++|..+
T Consensus 201 aDvV~l~~Plt~~t~~li~~-~~l~~mk~gailIN~aR 237 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGE-KQLKEMKKSAYLINCAR 237 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCH-HHHHHSCTTCEEEECSC
T ss_pred CCEEEEcCCCCHHHHHHhhH-HHHhhCCCCcEEEECCC
Confidence 99999999863 3233 343 34556877779998874
No 349
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.41 E-value=0.05 Score=56.35 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=60.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEE-EeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTV-VDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~-~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
|+||+|||+|.||..++..|... ...+ +++ +.+.+|++ +|+++++.+. -.+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~-----~~~l-~~~------------g~~~~lvaV~d~~~~~~~~----------id~ 53 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRK-----REEI-EKA------------IGEFKVTAVADSKSSISGD----------FSL 53 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----HHHH-HHH------------HCCEEEEEEECSSCEEESS----------CCH
T ss_pred cEEEEEEeccHHHHHHHHHHHhh-----HHHH-Hhc------------CCCEEEEEEEeCChHhccc----------cCH
Confidence 47999999999999999999871 0111 111 02445544 4555332211 000
Q ss_pred HHHHhhhcCCceEEe--cCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFS--TDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~--~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
.+.+...... ..++ .|+++.++ +.|+|++|+|+.... .+ +.+.+...+..++-||.++.-|
T Consensus 54 ~~~~~~~~~~-~~~~~~~d~~~ll~~~~iDvVv~~tp~~~h~-------------~~-a~~~~~~aL~aGkhVv~~NKkp 118 (327)
T 3do5_A 54 VEALRMKRET-GMLRDDAKAIEVVRSADYDVLIEASVTRVDG-------------GE-GVNYIREALKRGKHVVTSNKGP 118 (327)
T ss_dssp HHHHHHHHHH-SSCSBCCCHHHHHHHSCCSEEEECCCCC-----------------C-HHHHHHHHHTTTCEEEECCSHH
T ss_pred HHHHhhhccC-ccccCCCCHHHHhcCCCCCEEEECCCCcccc-------------hh-HHHHHHHHHHCCCeEEecCchh
Confidence 0100000000 0122 37777765 489999997765321 12 4455666788899888876644
Q ss_pred h
Q psy11160 160 V 160 (598)
Q Consensus 160 ~ 160 (598)
.
T Consensus 119 l 119 (327)
T 3do5_A 119 L 119 (327)
T ss_dssp H
T ss_pred h
Confidence 3
No 350
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.40 E-value=0.021 Score=57.57 Aligned_cols=68 Identities=6% Similarity=0.101 Sum_probs=51.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+++.|||+|-+|.+++..|++ .|. +|++++|+.++.+.+.+..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~---------------------------~G~~~i~v~nRt~~ka~~la~~~-------- 163 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKN---------------------------SGFEKLKIYARNVKTGQYLAALY-------- 163 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHH---------------------------TTCCCEEEECSCHHHHHHHHHHH--------
T ss_pred CCEEEEECCcHHHHHHHHHHHH---------------------------CCCCEEEEEeCCHHHHHHHHHHc--------
Confidence 3589999999999999999999 786 8999999999988876320
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPT 119 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~ 119 (598)
+..+..+.. +.++|+||-|+|.+.
T Consensus 164 ----------~~~~~~~~~--~~~~DivInaTp~gm 187 (271)
T 1npy_A 164 ----------GYAYINSLE--NQQADILVNVTSIGM 187 (271)
T ss_dssp ----------TCEEESCCT--TCCCSEEEECSSTTC
T ss_pred ----------CCccchhhh--cccCCEEEECCCCCc
Confidence 011222222 468999999987654
No 351
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=95.39 E-value=0.057 Score=56.11 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=67.7
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+|||....+.... . ++.. .++.++++.
T Consensus 163 l~g~tvgIIGl----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~--------~----g~~~-~~l~ell~~ 219 (335)
T 2g76_A 163 LNGKTLGILGL----------GRIGREVATRMQSFGMKTIGYDPIISPEVSAS--------F----GVQQ-LPLEEIWPL 219 (335)
T ss_dssp CTTCEEEEECC----------SHHHHHHHHHHHTTTCEEEEECSSSCHHHHHH--------T----TCEE-CCHHHHGGG
T ss_pred CCcCEEEEEeE----------CHHHHHHHHHHHHCCCEEEEECCCcchhhhhh--------c----Ccee-CCHHHHHhc
Confidence 57899999998 35778899999999999999999866532211 1 1222 478899999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++.... .++ ++ ....+.|++..+++|..+
T Consensus 220 aDvV~l~~P~t~~t~~li~-~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLN-DNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp CSEEEECCCCCTTTTTSBC-HHHHTTSCTTEEEEECSC
T ss_pred CCEEEEecCCCHHHHHhhC-HHHHhhCCCCcEEEECCC
Confidence 999999988763 343 33 345567877778888665
No 352
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.38 E-value=0.0094 Score=62.07 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=30.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
|||+|||+|..|+.+|..|++ .|++|+++|+++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~---------------------------~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK---------------------------HGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHh---------------------------CCCCEEEEecCC
Confidence 799999999999999999999 788888888753
No 353
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.34 E-value=0.054 Score=54.92 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=68.7
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTH 473 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ad 473 (598)
..+|+|+|+. .-...++..|.+.|++|.+||+.....+.... .++....++.++++ +|
T Consensus 15 ~~~I~vIG~G----------~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~~~~~~~~~~~~-aD 72 (296)
T 3qha_A 15 QLKLGYIGLG----------NMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-----------AGATLADSVADVAA-AD 72 (296)
T ss_dssp CCCEEEECCS----------TTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-----------TTCEECSSHHHHTT-SS
T ss_pred CCeEEEECcC----------HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CCCEEcCCHHHHHh-CC
Confidence 4689999983 57789999999999999999986543221111 13467789999999 99
Q ss_pred EEEEEeeccchhhccHHHHHhccCCCcEEEecCCCC
Q psy11160 474 AIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 474 alii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~ 509 (598)
+||+++..+..-+--+..+...+.+..+|+|...+.
T Consensus 73 vvi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~ 108 (296)
T 3qha_A 73 LIHITVLDDAQVREVVGELAGHAKPGTVIAIHSTIS 108 (296)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCC
T ss_pred EEEEECCChHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 999999876432222356666666677999998875
No 354
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.33 E-value=0.03 Score=56.33 Aligned_cols=94 Identities=11% Similarity=0.167 Sum_probs=66.4
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCE
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHA 474 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ada 474 (598)
+||+|+|+. .....++..|.+.|.+|.+||+.....+.... .++....++.++++++|+
T Consensus 2 ~~i~iIG~G----------~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~~~~~~~~~~~~~aDv 60 (287)
T 3pef_A 2 QKFGFIGLG----------IMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------LGAERAATPCEVVESCPV 60 (287)
T ss_dssp CEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TTCEECSSHHHHHHHCSE
T ss_pred CEEEEEeec----------HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------CCCeecCCHHHHHhcCCE
Confidence 589999973 57788999999999999999986433221111 134677899999999999
Q ss_pred EEEEeeccc-hhhccH--HHHHhccCCCcEEEecCCCC
Q psy11160 475 IVVCTEWDE-FVTLDY--KRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 475 lii~t~~~~-f~~ld~--~~l~~~m~~~~iI~D~r~i~ 509 (598)
||+++..+. .++.-+ ..+...+.+..+|+|..++.
T Consensus 61 vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~ 98 (287)
T 3pef_A 61 TFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVD 98 (287)
T ss_dssp EEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred EEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCC
Confidence 999998653 322111 33444555667999997764
No 355
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.32 E-value=0.045 Score=55.83 Aligned_cols=75 Identities=20% Similarity=0.364 Sum_probs=56.9
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.|. ||.++|..|.. .|..|+++++..
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~---------------------------~gAtVtv~~~~T------------------ 199 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMK---------------------------ENATVTIVHSGT------------------ 199 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHH---------------------------TTCEEEEECTTS------------------
T ss_pred CCEEEEECCCchHHHHHHHHHHH---------------------------CCCeEEEEeCCC------------------
Confidence 36899999876 89999999999 788999998621
Q ss_pred HHHHhhhcCCceEEecCHH--HHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIK--SAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~--~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
.+++ +.+++||+||.+++.|..- . ...++++.+||+-++-+
T Consensus 200 ---------------~~l~l~~~~~~ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi~~ 242 (300)
T 4a26_A 200 ---------------STEDMIDYLRTADIVIAAMGQPGYV---------K-----------GEWIKEGAAVVDVGTTP 242 (300)
T ss_dssp ---------------CHHHHHHHHHTCSEEEECSCCTTCB---------C-----------GGGSCTTCEEEECCCEE
T ss_pred ---------------CCchhhhhhccCCEEEECCCCCCCC---------c-----------HHhcCCCcEEEEEeccC
Confidence 1233 6789999999999876310 0 12358999999877654
No 356
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.32 E-value=0.05 Score=58.02 Aligned_cols=95 Identities=9% Similarity=0.132 Sum_probs=69.8
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|||+|+ ..-...+++.|...|.+|.+|||..... .+ ......++.++++
T Consensus 142 el~gktlGiIGl----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~------------~~---~~~~~~~l~ell~ 196 (404)
T 1sc6_A 142 EARGKKLGIIGY----------GHIGTQLGILAESLGMYVYFYDIENKLP------------LG---NATQVQHLSDLLN 196 (404)
T ss_dssp CSTTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCCC------------CT---TCEECSCHHHHHH
T ss_pred ccCCCEEEEEeE----------CHHHHHHHHHHHHCCCEEEEEcCCchhc------------cC---CceecCCHHHHHh
Confidence 357999999998 3677889999999999999999964311 11 1245568999999
Q ss_pred CCCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC--CCCh
Q psy11160 471 NTHAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK--ILNH 511 (598)
Q Consensus 471 ~adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~ 511 (598)
.+|+|++++... +-++ ++ ....+.|++..+++|+.+ +.|.
T Consensus 197 ~aDvV~l~~P~t~~t~~li~-~~~l~~mk~ga~lIN~aRg~~vd~ 240 (404)
T 1sc6_A 197 MSDVVSLHVPENPSTKNMMG-AKEISLMKPGSLLINASRGTVVDI 240 (404)
T ss_dssp HCSEEEECCCSSTTTTTCBC-HHHHHHSCTTEEEEECSCSSSBCH
T ss_pred cCCEEEEccCCChHHHHHhh-HHHHhhcCCCeEEEECCCChHHhH
Confidence 999999998875 3333 34 334556877778888776 3454
No 357
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.32 E-value=0.024 Score=57.46 Aligned_cols=67 Identities=10% Similarity=0.125 Sum_probs=51.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+++.|+|+|-+|.+++..|++ .|. +|++++|+.++.+.+.+...
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~---------------------------~G~~~v~v~nRt~~ka~~La~~~~------- 167 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKD---------------------------NFAKDIYVVTRNPEKTSEIYGEFK------- 167 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHH---------------------------TTCSEEEEEESCHHHHHHHCTTSE-------
T ss_pred CCEEEEECCcHHHHHHHHHHHH---------------------------cCCCEEEEEeCCHHHHHHHHHhcC-------
Confidence 3689999999999999999999 787 99999999999988764310
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
.....+..+ + ++|+||-|+|..
T Consensus 168 -----------~~~~~~l~~-l-~~DivInaTp~G 189 (282)
T 3fbt_A 168 -----------VISYDELSN-L-KGDVIINCTPKG 189 (282)
T ss_dssp -----------EEEHHHHTT-C-CCSEEEECSSTT
T ss_pred -----------cccHHHHHh-c-cCCEEEECCccC
Confidence 111122333 4 899999997654
No 358
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=95.31 E-value=0.054 Score=55.48 Aligned_cols=92 Identities=17% Similarity=0.260 Sum_probs=66.8
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||....+...+ . ++.. .++.+++++
T Consensus 140 l~g~~vgIiG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~--------~----g~~~-~~l~ell~~ 196 (307)
T 1wwk_A 140 LEGKTIGIIGF----------GRIGYQVAKIANALGMNILLYDPYPNEERAKE--------V----NGKF-VDLETLLKE 196 (307)
T ss_dssp CTTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH--------T----TCEE-CCHHHHHHH
T ss_pred cCCceEEEEcc----------CHHHHHHHHHHHHCCCEEEEECCCCChhhHhh--------c----Cccc-cCHHHHHhh
Confidence 47899999998 36788899999999999999999876532211 1 1233 378889999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++.... .++ ++ ......|++..+++|..+
T Consensus 197 aDvV~l~~p~~~~t~~li~-~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLIN-EERLKLMKKTAILINTSR 233 (307)
T ss_dssp CSEEEECCCCSTTTTTCBC-HHHHHHSCTTCEEEECSC
T ss_pred CCEEEEecCCChHHhhhcC-HHHHhcCCCCeEEEECCC
Confidence 999999988643 344 33 334456777778888765
No 359
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.30 E-value=0.048 Score=55.28 Aligned_cols=74 Identities=20% Similarity=0.355 Sum_probs=56.8
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.|. ||.++|..|.. .|..|+++++.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~---------------------------~gAtVtv~hs~------------------- 192 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLL---------------------------AGCTTTVTHRF------------------- 192 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHT---------------------------TTCEEEEECSS-------------------
T ss_pred CCEEEEECCChHHHHHHHHHHHH---------------------------CCCeEEEEeCC-------------------
Confidence 36899999995 79999999998 78899998632
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
|.++.+.+++||+||.+++.|.-- .. +.++++.+||+-++-
T Consensus 193 --------------t~~L~~~~~~ADIVI~Avg~p~lI-------~~-------------~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 193 --------------TKNLRHHVENADLLIVAVGKPGFI-------PG-------------DWIKEGAIVIDVGIN 233 (288)
T ss_dssp --------------CSCHHHHHHHCSEEEECSCCTTCB-------CT-------------TTSCTTCEEEECCCE
T ss_pred --------------chhHHHHhccCCEEEECCCCcCcC-------CH-------------HHcCCCcEEEEccCC
Confidence 245677899999999999877311 00 124789999986654
No 360
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.28 E-value=0.052 Score=56.31 Aligned_cols=93 Identities=13% Similarity=0.208 Sum_probs=67.3
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|+|+|+ ..-+..+++.|...|.+|.+|||....+.. ..+ ++.. .++.++++
T Consensus 143 ~l~g~~vgIIG~----------G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~~-----------g~~~-~~l~e~l~ 199 (333)
T 2d0i_A 143 SLYGKKVGILGM----------GAIGKAIARRLIPFGVKLYYWSRHRKVNVE-KEL-----------KARY-MDIDELLE 199 (333)
T ss_dssp CSTTCEEEEECC----------SHHHHHHHHHHGGGTCEEEEECSSCCHHHH-HHH-----------TEEE-CCHHHHHH
T ss_pred CCCcCEEEEEcc----------CHHHHHHHHHHHHCCCEEEEECCCcchhhh-hhc-----------Ccee-cCHHHHHh
Confidence 357899999998 357788999999999999999998765221 111 1233 37788899
Q ss_pred CCCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 471 NTHAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 471 ~adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
++|+|++++... +.+++=-..+...|++. +++|...
T Consensus 200 ~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 200 KSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp HCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred hCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence 999999999887 55553223444567766 8888764
No 361
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.18 E-value=0.032 Score=58.00 Aligned_cols=23 Identities=17% Similarity=0.444 Sum_probs=20.5
Q ss_pred CCceEEEEC-CChhHHHHHHHHHH
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~ 26 (598)
.|+||+|+| .|++|..+...|..
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~ 26 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNR 26 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHH
T ss_pred CceEEEEECCCChHHHHHHHHHHh
Confidence 457999999 59999999999887
No 362
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.18 E-value=0.015 Score=60.30 Aligned_cols=37 Identities=35% Similarity=0.466 Sum_probs=32.9
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS 64 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 64 (598)
||+...+|+|||.|.+|+++|..|++ .|++|+++|++
T Consensus 1 Mm~~~~dVvIIGgGi~Gl~~A~~La~---------------------------~G~~V~lle~~ 37 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVGVTIAHELAK---------------------------RGEEVTVIEKR 37 (382)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEeCC
Confidence 77767789999999999999999999 78899999986
No 363
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.16 E-value=0.011 Score=61.70 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=32.8
Q ss_pred CCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
++|+|.|.|+ |++|..++..|.+ .|++|+++++++..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~ 65 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH---------------------------EGHYVIASDWKKNE 65 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSCCS
T ss_pred cCCeEEEECCccHHHHHHHHHHHH---------------------------CCCeEEEEECCCcc
Confidence 4679999998 9999999999999 89999999997543
No 364
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.15 E-value=0.046 Score=56.71 Aligned_cols=91 Identities=11% Similarity=0.180 Sum_probs=66.8
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||...... +.....++.+++++
T Consensus 162 l~g~~vgIIG~----------G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g~~~~~~l~ell~~ 215 (333)
T 3ba1_A 162 FSGKRVGIIGL----------GRIGLAVAERAEAFDCPISYFSRSKKPNT----------------NYTYYGSVVELASN 215 (333)
T ss_dssp CTTCCEEEECC----------SHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------CSEEESCHHHHHHT
T ss_pred cCCCEEEEECC----------CHHHHHHHHHHHHCCCEEEEECCCchhcc----------------CceecCCHHHHHhc
Confidence 57899999998 36788999999999999999998653210 12345678899999
Q ss_pred CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCCC
Q psy11160 472 THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRKI 508 (598)
Q Consensus 472 adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~i 508 (598)
+|+|++++... +.+++=-....+.|++..+++|..+.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG 253 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRG 253 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 99999999874 44443213344567766788887653
No 365
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.10 E-value=0.078 Score=54.58 Aligned_cols=75 Identities=11% Similarity=0.208 Sum_probs=53.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCC---HHHHHHHHcCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKS---EERIRQWNSNKLPIYE 80 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~---~~~~~~~~~~~~~~~e 80 (598)
.+++.|+|+|-+|.+++..|++ .|. +|++++|+ .++.+.+.+.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~---------------------------~Ga~~V~i~nR~~~~~~~a~~la~~------ 200 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAAL---------------------------DGVKEISIFNRKDDFYANAEKTVEK------ 200 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH---------------------------TTCSEEEEEECSSTTHHHHHHHHHH------
T ss_pred CCEEEEECCChHHHHHHHHHHH---------------------------CCCCEEEEEECCCchHHHHHHHHHH------
Confidence 3689999999999999999999 787 89999999 8888876531
Q ss_pred CChHHHHhhhcCCceEEe--c---CHHHHhccCcEEEEecCCC
Q psy11160 81 PGLDEVVKKTRDVNLFFS--T---DIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~---~~~~~~~~adviii~v~tp 118 (598)
+.......+... . ++.+.+.++|+||-|+|..
T Consensus 201 ------~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~G 237 (315)
T 3tnl_A 201 ------INSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVG 237 (315)
T ss_dssp ------HHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTT
T ss_pred ------hhhhcCCceEEeccchHHHHHhhhcCCCEEEECccCC
Confidence 000000112221 1 2345678999999997654
No 366
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.10 E-value=0.059 Score=55.75 Aligned_cols=94 Identities=13% Similarity=0.200 Sum_probs=66.2
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+. .-+..+++.|...|.+|.+||+.....+....+ ++... ++.+++++
T Consensus 153 l~g~~vgIIG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-----------g~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 153 LTQSTVGIIGLG----------RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF-----------QAEFV-STPELAAQ 210 (330)
T ss_dssp CTTCEEEEECCS----------HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT-----------TCEEC-CHHHHHHH
T ss_pred CCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCCcchhHHHhc-----------CceeC-CHHHHHhh
Confidence 468999999983 577889999999999999999865422211111 22444 78888999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCCC
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRKI 508 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~i 508 (598)
+|+|++++.... .++ ++ ..+...|++..++++..+.
T Consensus 211 aDvVi~~vp~~~~t~~~i~-~~~~~~mk~gailIn~srg 248 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCN-KDFFQKMKETAVFINISRG 248 (330)
T ss_dssp CSEEEECCCCCTTTTTCBS-HHHHHHSCTTCEEEECSCG
T ss_pred CCEEEEeCCCChHHHHhhC-HHHHhcCCCCcEEEECCCC
Confidence 999999998653 333 33 3445567766688887653
No 367
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.08 E-value=0.06 Score=57.56 Aligned_cols=95 Identities=14% Similarity=0.175 Sum_probs=67.3
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|||+|+ ..-...+++.|...|.+|.+|||..... .+ ......++.++++.
T Consensus 154 l~gktvGIIGl----------G~IG~~vA~~l~~~G~~V~~yd~~~~~~------------~~---~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 154 VRGKTLGIVGY----------GNIGSQVGNLAESLGMTVRYYDTSDKLQ------------YG---NVKPAASLDELLKT 208 (416)
T ss_dssp STTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECTTCCCC------------BT---TBEECSSHHHHHHH
T ss_pred CCCCEEEEEee----------CHHHHHHHHHHHHCCCEEEEECCcchhc------------cc---CcEecCCHHHHHhh
Confidence 47899999998 3678899999999999999999853211 01 12456789999999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC--CCChh
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK--ILNHD 512 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~ 512 (598)
+|+|+++..... -++ ++- .....|++..+++|..+ +.|.+
T Consensus 209 aDvV~lhvPlt~~T~~li~~-~~l~~mk~gailIN~aRG~vvd~~ 252 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITE-AKLRKMKKGAFLINNARGSDVDLE 252 (416)
T ss_dssp CSEEEECCCC-----CCBCH-HHHHHSCTTEEEEECSCTTSBCHH
T ss_pred CCEEEEeCCCCHHHhhhcCH-HHHhhCCCCcEEEECCCChhhhHH
Confidence 999999987643 233 343 34456877778999765 34543
No 368
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.08 E-value=0.026 Score=58.41 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=67.4
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|||+|+ ..-...+++.|...|.+|.+||+....... + . ......++.++++.
T Consensus 138 l~g~tvGIIGl----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~---------~-~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 138 LKGRTLLILGT----------GSIGQHIAHTGKHFGMKVLGVSRSGRERAG---F---------D-QVYQLPALNKMLAQ 194 (324)
T ss_dssp STTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCCCTT---C---------S-EEECGGGHHHHHHT
T ss_pred cccceEEEEEE----------CHHHHHHHHHHHhCCCEEEEEcCChHHhhh---h---------h-cccccCCHHHHHhh
Confidence 47899999998 467889999999999999999986532210 0 0 11234678899999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC--CCChh
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK--ILNHD 512 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~ 512 (598)
+|+|++++... +-+. ++- .....|++..+++|+.+ +.|.+
T Consensus 195 aDvV~l~lPlt~~T~~li~~-~~l~~mk~gailIN~aRG~~vde~ 238 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTA-SRFEHCKPGAILFNVGRGNAINEG 238 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCT-TTTTCSCTTCEEEECSCGGGBCHH
T ss_pred CCEEEEeCCCCHHHHHHhHH-HHHhcCCCCcEEEECCCchhhCHH
Confidence 99999998753 2232 232 33456777778888765 34543
No 369
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.06 E-value=0.017 Score=57.33 Aligned_cols=72 Identities=13% Similarity=0.212 Sum_probs=47.7
Q ss_pred eEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC--CceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 7 HICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP--NIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 7 ~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+|.|.|+ |++|..++..|.+ . |++|+++++++++.+.+......+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~---------------------------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--- 50 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMK---------------------------TVPASQIVAIVRNPAKAQALAAQGITVRQ--- 50 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTT---------------------------TSCGGGEEEEESCTTTCHHHHHTTCEEEE---
T ss_pred CEEEEcCCchHHHHHHHHHHh---------------------------hCCCceEEEEEcChHhhhhhhcCCCeEEE---
Confidence 5889997 9999999999998 6 89999999988766554421111100
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
..+.-..+..++++++|+||.+...
T Consensus 51 ---------~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 51 ---------ADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp ---------CCTTCHHHHHHHTTTCSEEEECC--
T ss_pred ---------cCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 0111112345577889999988653
No 370
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.06 E-value=0.054 Score=59.79 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=68.5
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+. .-...+++.|.+.|.+|.+|||....+.... + | +... ++.++++.
T Consensus 140 l~g~~vgIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~-~-------g----~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 140 IFGKTVGVVGLG----------RIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-L-------G----IELL-SLDDLLAR 196 (529)
T ss_dssp CTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-H-------T----CEEC-CHHHHHHH
T ss_pred cCCCEEEEEeeC----------HHHHHHHHHHHhCCCEEEEECCCCChhHHHh-c-------C----cEEc-CHHHHHhc
Confidence 578999999983 5678899999999999999999875433221 1 1 2333 78889999
Q ss_pred CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|+++++.. +.+++=-..+...|++..+++|...
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~ar 233 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAAR 233 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCC
Confidence 99999999877 5555322335566777779999765
No 371
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.04 E-value=0.048 Score=55.99 Aligned_cols=95 Identities=16% Similarity=0.213 Sum_probs=67.4
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
...+|+|+|+ ...+..++..|.+.|.+|.+||+.....+ .+. ..++....++.++++++
T Consensus 30 ~~~~I~iIG~----------G~mG~~~a~~l~~~G~~V~~~dr~~~~~~---~l~--------~~g~~~~~~~~e~~~~a 88 (320)
T 4dll_A 30 YARKITFLGT----------GSMGLPMARRLCEAGYALQVWNRTPARAA---SLA--------ALGATIHEQARAAARDA 88 (320)
T ss_dssp CCSEEEEECC----------TTTHHHHHHHHHHTTCEEEEECSCHHHHH---HHH--------TTTCEEESSHHHHHTTC
T ss_pred CCCEEEEECc----------cHHHHHHHHHHHhCCCeEEEEcCCHHHHH---HHH--------HCCCEeeCCHHHHHhcC
Confidence 4569999998 35788999999999999999998543211 111 01346778999999999
Q ss_pred CEEEEEeeccc-hhhccHH--HHHhccCCCcEEEecCCCC
Q psy11160 473 HAIVVCTEWDE-FVTLDYK--RIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 473 dalii~t~~~~-f~~ld~~--~l~~~m~~~~iI~D~r~i~ 509 (598)
|+||+++..+. .++. +. .+...+.+..+|+|.....
T Consensus 89 DvVi~~vp~~~~~~~v-~~~~~~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 89 DIVVSMLENGAVVQDV-LFAQGVAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp SEEEECCSSHHHHHHH-HTTTCHHHHCCTTCEEEECSCCC
T ss_pred CEEEEECCCHHHHHHH-HcchhHHhhCCCCCEEEecCCCC
Confidence 99999998653 2221 11 3334456667999998875
No 372
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.01 E-value=0.015 Score=61.05 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.7
Q ss_pred CCCCceEEEEC-CChhHHHHHHHHHHhCCCCcc
Q psy11160 2 VQTISHICCIG-AGYVGGPTCSVIALKCPNIQV 33 (598)
Q Consensus 2 ~~~~~~I~viG-~G~vG~~~a~~la~~~~~~~~ 33 (598)
|.+++||+||| .||+|.-+...|.. .|.+.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~-hP~~el 35 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSN-HPYIKP 35 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTT-CSSEEE
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHh-CCCceE
Confidence 44557999999 59999999998876 344433
No 373
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.01 E-value=0.015 Score=61.05 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.7
Q ss_pred CCCCceEEEEC-CChhHHHHHHHHHHhCCCCcc
Q psy11160 2 VQTISHICCIG-AGYVGGPTCSVIALKCPNIQV 33 (598)
Q Consensus 2 ~~~~~~I~viG-~G~vG~~~a~~la~~~~~~~~ 33 (598)
|.+++||+||| .||+|.-+...|.. .|.+.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~-hP~~el 35 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSN-HPYIKP 35 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTT-CSSEEE
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHh-CCCceE
Confidence 44557999999 59999999998876 344433
No 374
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.99 E-value=0.037 Score=56.50 Aligned_cols=96 Identities=11% Similarity=0.190 Sum_probs=66.8
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
+-.+|+|+|+ ......++..|.+.|.+|.+||+.....+.... .++....++.++++++
T Consensus 20 ~m~~I~iIG~----------G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g~~~~~~~~~~~~~a 78 (310)
T 3doj_A 20 HMMEVGFLGL----------GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------HGASVCESPAEVIKKC 78 (310)
T ss_dssp CSCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TTCEECSSHHHHHHHC
T ss_pred cCCEEEEECc----------cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CCCeEcCCHHHHHHhC
Confidence 3468999998 357889999999999999999986432221111 1346678999999999
Q ss_pred CEEEEEeeccc-hhhccH--HHHHhccCCCcEEEecCCCC
Q psy11160 473 HAIVVCTEWDE-FVTLDY--KRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 473 dalii~t~~~~-f~~ld~--~~l~~~m~~~~iI~D~r~i~ 509 (598)
|+||+++..+. .++.-+ +.+...+.+..+|+|...+.
T Consensus 79 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~ 118 (310)
T 3doj_A 79 KYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVD 118 (310)
T ss_dssp SEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCC
T ss_pred CEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCC
Confidence 99999997653 222110 23334455666999988764
No 375
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.98 E-value=0.08 Score=53.58 Aligned_cols=74 Identities=20% Similarity=0.320 Sum_probs=56.5
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.|. +|.++|..|.. .|..|++.++.
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~---------------------------~gAtVtv~h~~------------------- 193 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLN---------------------------AGATVSVCHIK------------------- 193 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHH---------------------------TTCEEEEECTT-------------------
T ss_pred CCEEEEECCCchHHHHHHHHHHH---------------------------CCCeEEEEeCC-------------------
Confidence 36899999876 89999999999 78899998742
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
|.++++.+++||+||.+++.|.- +. .+.++++.+|++-..-
T Consensus 194 --------------t~~L~~~~~~ADIVI~Avg~p~~--------------I~------~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 194 --------------TKDLSLYTRQADLIIVAAGCVNL--------------LR------SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp --------------CSCHHHHHTTCSEEEECSSCTTC--------------BC------GGGSCTTEEEEECCCE
T ss_pred --------------chhHHHHhhcCCEEEECCCCCCc--------------CC------HHHcCCCeEEEEeccC
Confidence 23566789999999999987631 00 1345889999886554
No 376
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=94.98 E-value=0.076 Score=55.02 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=67.2
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+. .-+..+++.|...|.+|.+|||....+ ....+ ++.+ .++.+++++
T Consensus 148 l~g~~vgIIG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~-~~~~~-----------g~~~-~~l~~~l~~ 204 (334)
T 2dbq_A 148 VYGKTIGIIGLG----------RIGQAIAKRAKGFNMRILYYSRTRKEE-VEREL-----------NAEF-KPLEDLLRE 204 (334)
T ss_dssp CTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHH-----------CCEE-CCHHHHHHH
T ss_pred CCCCEEEEEccC----------HHHHHHHHHHHhCCCEEEEECCCcchh-hHhhc-----------Cccc-CCHHHHHhh
Confidence 578999999983 577899999999999999999977652 22111 1233 478888999
Q ss_pred CCEEEEEeeccc-hhhccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWDE-FVTLDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~~-f~~ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++.... .+++=-..+...|++..+++|...
T Consensus 205 aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 205 SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 999999998765 444322344556776678888765
No 377
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=94.98 E-value=0.068 Score=54.88 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=66.5
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||....... .. . ++.. .++.++++.
T Consensus 140 l~g~~vgIIG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~-~~-------~----g~~~-~~l~ell~~ 196 (313)
T 2ekl_A 140 LAGKTIGIVGF----------GRIGTKVGIIANAMGMKVLAYDILDIREKA-EK-------I----NAKA-VSLEELLKN 196 (313)
T ss_dssp CTTCEEEEESC----------SHHHHHHHHHHHHTTCEEEEECSSCCHHHH-HH-------T----TCEE-CCHHHHHHH
T ss_pred CCCCEEEEEee----------CHHHHHHHHHHHHCCCEEEEECCCcchhHH-Hh-------c----Ccee-cCHHHHHhh
Confidence 46899999998 367889999999999999999998765321 11 1 1233 478889999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++.... .++ ++ ....+.|++..+++|...
T Consensus 197 aDvVvl~~P~~~~t~~li~-~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIID-YPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CSEEEECCCCCTTSCCSBC-HHHHHHSCTTEEEEESSC
T ss_pred CCEEEEeccCChHHHHhhC-HHHHhcCCCCCEEEECCC
Confidence 999999988644 333 23 334456777778888654
No 378
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.97 E-value=0.04 Score=55.46 Aligned_cols=94 Identities=10% Similarity=0.105 Sum_probs=65.6
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCE
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHA 474 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ada 474 (598)
+||+|+|+ ......++..|.+.|.+|.+||+.....+.... . +.....++.++++++|+
T Consensus 2 ~~I~iiG~----------G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------~----g~~~~~~~~~~~~~adv 60 (287)
T 3pdu_A 2 TTYGFLGL----------GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-------L----GARQASSPAEVCAACDI 60 (287)
T ss_dssp CCEEEECC----------STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-------H----TCEECSCHHHHHHHCSE
T ss_pred CeEEEEcc----------CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------C----CCeecCCHHHHHHcCCE
Confidence 47999997 367889999999999999999986432221111 1 23667899999999999
Q ss_pred EEEEeecc-chhhccH--HHHHhccCCCcEEEecCCCC
Q psy11160 475 IVVCTEWD-EFVTLDY--KRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 475 lii~t~~~-~f~~ld~--~~l~~~m~~~~iI~D~r~i~ 509 (598)
+|+++..+ ..++.=+ +.+...+.+..+|+|.....
T Consensus 61 vi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~ 98 (287)
T 3pdu_A 61 TIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVD 98 (287)
T ss_dssp EEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCC
T ss_pred EEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCC
Confidence 99999876 3322110 23334455566899988764
No 379
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.97 E-value=0.16 Score=52.70 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=33.8
Q ss_pred CCCCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHH
Q psy11160 1 MVQTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERI 68 (598)
Q Consensus 1 m~~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~ 68 (598)
|..+.|+|.|.|+ |++|..++..|++ .|++|+++++++++.
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~ 42 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAA---------------------------VGHHVRAQVHSLKGL 42 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHH---------------------------TTCCEEEEESCSCSH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHh---------------------------CCCEEEEEECCCChh
Confidence 4333578999995 9999999999999 899999999987654
No 380
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.96 E-value=0.014 Score=59.87 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=45.8
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.|+|.|.|+ |++|..++..|++ .|++|+++++++.. .+. .+..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~---------------------------~G~~V~~~~r~~~~-----~~~-~~~~--- 62 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRT---------------------------QGRTVRGFDLRPSG-----TGG-EEVV--- 62 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHH---------------------------TTCCEEEEESSCCS-----SCC-SEEE---
T ss_pred CCEEEEECCCChHHHHHHHHHHh---------------------------CCCEEEEEeCCCCC-----CCc-cEEe---
Confidence 478999998 9999999999999 89999999998654 111 1100
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
..+.-..+..++++++|+||-+..
T Consensus 63 ---------~Dl~d~~~~~~~~~~~d~vih~A~ 86 (347)
T 4id9_A 63 ---------GSLEDGQALSDAIMGVSAVLHLGA 86 (347)
T ss_dssp ---------SCTTCHHHHHHHHTTCSEEEECCC
T ss_pred ---------cCcCCHHHHHHHHhCCCEEEECCc
Confidence 011111234556789999998864
No 381
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.96 E-value=0.032 Score=57.15 Aligned_cols=81 Identities=9% Similarity=0.012 Sum_probs=49.3
Q ss_pred CCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC----HHHHHHHHcCCCCC
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS----EERIRQWNSNKLPI 78 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~----~~~~~~~~~~~~~~ 78 (598)
+.|+|.|.|+ |++|..++..|.+ .|++|++++++ .+.++.+.....+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~ 76 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLK---------------------------LNQVVIGLDNFSTGHQYNLDEVKTLVSTE 76 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEECCSSCCHHHHHHHHHTSCHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHH---------------------------CCCEEEEEeCCCCCchhhhhhhhhccccc
Confidence 3579999995 9999999999999 89999999994 44455444210000
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
..+++. .....+.-..++.++++++|+||-+..
T Consensus 77 ~~~~~~-----~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 77 QWSRFC-----FIEGDIRDLTTCEQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHTTEE-----EEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred cCCceE-----EEEccCCCHHHHHHHhcCCCEEEECCc
Confidence 000000 000111111234556788999998874
No 382
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.93 E-value=0.091 Score=53.17 Aligned_cols=75 Identities=23% Similarity=0.403 Sum_probs=56.9
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.|. +|.++|..|.. .|..|++..+.
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~---------------------------~gAtVtv~hs~------------------- 194 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLN---------------------------AKATVTTCHRF------------------- 194 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHH---------------------------TTCEEEEECTT-------------------
T ss_pred CCEEEEECCCchhHHHHHHHHHH---------------------------CCCeEEEEeCC-------------------
Confidence 36899999876 89999999999 78899998642
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
|.++++.+++||+||.+++.|.- +. .+.++++.+|++-+.-+
T Consensus 195 --------------t~~L~~~~~~ADIVI~Avg~p~~--------------I~------~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 195 --------------TTDLKSHTTKADILIVAVGKPNF--------------IT------ADMVKEGAVVIDVGINH 236 (285)
T ss_dssp --------------CSSHHHHHTTCSEEEECCCCTTC--------------BC------GGGSCTTCEEEECCCEE
T ss_pred --------------chhHHHhcccCCEEEECCCCCCC--------------CC------HHHcCCCcEEEEecccC
Confidence 23567789999999999987631 00 12458899999866543
No 383
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.86 E-value=0.017 Score=58.84 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=60.2
Q ss_pred CCceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEE-EeCCHHHHHHHHcCCCCCCCC
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTV-VDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~-~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+++||+|+| +|.||..++..+... +++++++ +|+++... .|..
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~--------------------------~~~eLvg~vd~~~~~~----~G~d----- 64 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR--------------------------KDVELCAVLVRKGSSF----VDKD----- 64 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC--------------------------SSEEEEEEBCCTTCTT----TTSB-----
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC--------------------------CCCEEEEEEecCCccc----cccc-----
Confidence 456999999 999999999988761 5677555 47753210 0100
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
..++.. ....++.+++|+++.+.++|++|-.+ .| ..+.+.+...+..+.-+|+.||-
T Consensus 65 -~gel~G-~~~~gv~v~~dl~~ll~~aDVvIDFT-~p-----------------~a~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 65 -ASILIG-SDFLGVRITDDPESAFSNTEGILDFS-QP-----------------QASVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp -GGGGTT-CSCCSCBCBSCHHHHTTSCSEEEECS-CH-----------------HHHHHHHHHHHHHTCEEEECCCC
T ss_pred -hHHhhc-cCcCCceeeCCHHHHhcCCCEEEEcC-CH-----------------HHHHHHHHHHHHcCCCEEEECCC
Confidence 000000 00124567789998899999988774 22 12233344445567777777775
No 384
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.86 E-value=0.073 Score=55.48 Aligned_cols=21 Identities=14% Similarity=0.387 Sum_probs=19.7
Q ss_pred ceEEEECCChhHHHHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~ 26 (598)
+||+|+|+|.+|..++..|..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~ 23 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSM 23 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHh
Confidence 699999999999999999887
No 385
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.85 E-value=0.01 Score=61.22 Aligned_cols=74 Identities=14% Similarity=0.101 Sum_probs=51.0
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.|. ||.++|..|.. .|..|+++|++..+......... .
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~---------------------------~gAtVtv~nR~~~~l~~ra~~la---~--- 223 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAN---------------------------DGATVYSVDVNNIQKFTRGESLK---L--- 223 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHT---------------------------TSCEEEEECSSEEEEEESCCCSS---C---
T ss_pred CCEEEEECCCcchHHHHHHHHHH---------------------------CCCEEEEEeCchHHHHhHHHHHh---h---
Confidence 36899999996 59999999998 78899999987444322111100 0
Q ss_pred HHHHhhhcCCceE-E--e--cCHHHHhccCcEEEEecCCC
Q psy11160 84 DEVVKKTRDVNLF-F--S--TDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 84 ~~~~~~~~~~~~~-~--~--~~~~~~~~~adviii~v~tp 118 (598)
. . ...+ . + .++.+.+.+||+||.+++.|
T Consensus 224 -----~-~-~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p 256 (320)
T 1edz_A 224 -----N-K-HHVEDLGEYSEDLLKKCSLDSDVVITGVPSE 256 (320)
T ss_dssp -----C-C-CEEEEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred -----h-c-ccccccccccHhHHHHHhccCCEEEECCCCC
Confidence 0 0 0111 1 2 57888999999999999876
No 386
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=94.84 E-value=0.085 Score=53.95 Aligned_cols=88 Identities=13% Similarity=0.178 Sum_probs=66.6
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||... +. . .....++.++++.
T Consensus 122 l~g~~vgIIG~----------G~IG~~~A~~l~~~G~~V~~~dr~~~-~~--~--------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 122 IQGEKVAVLGL----------GEIGTRVGKILAALGAQVRGFSRTPK-EG--P--------------WRFTNSLEEALRE 174 (303)
T ss_dssp CTTCEEEEESC----------STHHHHHHHHHHHTTCEEEEECSSCC-CS--S--------------SCCBSCSHHHHTT
T ss_pred CCCCEEEEEcc----------CHHHHHHHHHHHHCCCEEEEECCCcc-cc--C--------------cccCCCHHHHHhh
Confidence 46899999998 36788999999999999999998654 11 0 0123578889999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++.... .++ ++ ......|++..+++|..+
T Consensus 175 aDvV~l~~P~~~~t~~~i~-~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVK-YQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp CSEEEECCCCSTTTTTCBC-HHHHTTSCTTCEEEECSC
T ss_pred CCEEEEeCcCchHHHHHhC-HHHHhhCCCCCEEEECCC
Confidence 999999998763 344 33 345567887779998876
No 387
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.83 E-value=0.028 Score=56.86 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=47.7
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH-HHHH---HHcCCCCCCC
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE-RIRQ---WNSNKLPIYE 80 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~-~~~~---~~~~~~~~~e 80 (598)
++|.|.|+ |++|..++..|.+ .|++|++++|++. +.+. +......+..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~ 64 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLK---------------------------LGHPTYVFTRPNSSKTTLLDEFQSLGAIIVK 64 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHH---------------------------TTCCEEEEECTTCSCHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHH---------------------------CCCcEEEEECCCCchhhHHHHhhcCCCEEEE
Confidence 48999996 9999999999999 8999999999864 3222 2211111100
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
..+.-..++.++++++|+||.+.+
T Consensus 65 ------------~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 65 ------------GELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp ------------CCTTCHHHHHHHHTTCSEEEECCC
T ss_pred ------------ecCCCHHHHHHHHcCCCEEEECCc
Confidence 001111234567889999998864
No 388
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.81 E-value=0.061 Score=54.36 Aligned_cols=93 Identities=16% Similarity=0.229 Sum_probs=64.8
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCE
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHA 474 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ada 474 (598)
+||+|+|+ ......++..|.+.|++|.+||+.... .. .+.. .++....++.++++++|+
T Consensus 4 ~~I~iiG~----------G~mG~~~a~~l~~~G~~V~~~d~~~~~--~~-~~~~--------~g~~~~~~~~~~~~~aDv 62 (302)
T 2h78_A 4 KQIAFIGL----------GHMGAPMATNLLKAGYLLNVFDLVQSA--VD-GLVA--------AGASAARSARDAVQGADV 62 (302)
T ss_dssp CEEEEECC----------STTHHHHHHHHHHTTCEEEEECSSHHH--HH-HHHH--------TTCEECSSHHHHHTTCSE
T ss_pred CEEEEEee----------cHHHHHHHHHHHhCCCeEEEEcCCHHH--HH-HHHH--------CCCeEcCCHHHHHhCCCe
Confidence 58999997 357889999999999999999985332 11 1110 134667899999999999
Q ss_pred EEEEeeccc-hhhccHH---HHHhccCCCcEEEecCCCC
Q psy11160 475 IVVCTEWDE-FVTLDYK---RIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 475 lii~t~~~~-f~~ld~~---~l~~~m~~~~iI~D~r~i~ 509 (598)
||+++..+. .++ -+. .+...+.+..+|+|..+..
T Consensus 63 vi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vi~~st~~ 100 (302)
T 2h78_A 63 VISMLPASQHVEG-LYLDDDGLLAHIAPGTLVLECSTIA 100 (302)
T ss_dssp EEECCSCHHHHHH-HHHSSSCGGGSSCSSCEEEECSCCC
T ss_pred EEEECCCHHHHHH-HHcCchhHHhcCCCCcEEEECCCCC
Confidence 999997553 222 111 3334455666899987764
No 389
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.79 E-value=0.096 Score=53.01 Aligned_cols=75 Identities=21% Similarity=0.344 Sum_probs=56.9
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++.|||.|. +|.++|..|.. .|..|++..+.
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~---------------------------~gAtVtv~hs~------------------- 194 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLL---------------------------GGCTVTVTHRF------------------- 194 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHH---------------------------TTCEEEEECTT-------------------
T ss_pred CCEEEEECCCchhHHHHHHHHHH---------------------------CCCeEEEEeCC-------------------
Confidence 36899999875 99999999999 78899998641
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCc
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVP 159 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~ 159 (598)
|.++++.+++||+||.+++.|.-- . .+.++++.+|++-+.-+
T Consensus 195 --------------T~~L~~~~~~ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 195 --------------TRDLADHVSRADLVVVAAGKPGLV---------K-----------GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp --------------CSCHHHHHHTCSEEEECCCCTTCB---------C-----------GGGSCTTCEEEECCSCS
T ss_pred --------------CcCHHHHhccCCEEEECCCCCCCC---------C-----------HHHcCCCeEEEEecccc
Confidence 235667899999999999876310 0 13458999999866543
No 390
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.76 E-value=0.053 Score=55.12 Aligned_cols=68 Identities=13% Similarity=0.116 Sum_probs=49.2
Q ss_pred CCCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCC
Q psy11160 2 VQTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYE 80 (598)
Q Consensus 2 ~~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e 80 (598)
.++.+||+|+|+ |.+|..++..+.+ .|++ .++.+++.+. +.. +
T Consensus 4 ~~~~~~VaVvGasG~~G~~~~~~l~~---------------------------~g~~-~v~~VnP~~~-----g~~-i-- 47 (288)
T 1oi7_A 4 VNRETRVLVQGITGREGQFHTKQMLT---------------------------YGTK-IVAGVTPGKG-----GME-V-- 47 (288)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHH---------------------------HTCE-EEEEECTTCT-----TCE-E--
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHH---------------------------cCCe-EEEEECCCCC-----Cce-E--
Confidence 345679999999 9999999999888 5777 4455554321 100 0
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNT 117 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~t 117 (598)
.++....+++++.+ .+|++++++|.
T Consensus 48 ------------~G~~vy~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 48 ------------LGVPVYDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp ------------TTEEEESSHHHHHHHSCCSEEEECCCH
T ss_pred ------------CCEEeeCCHHHHhhcCCCCEEEEecCH
Confidence 24677788888887 89999999864
No 391
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.70 E-value=0.014 Score=64.05 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=32.6
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
+|+|.|.| .|++|..++..|.+ .|++|+++++++.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~---------------------------~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQT---------------------------GGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHH---------------------------CCCEEEEEECCCCC
Confidence 67999999 59999999999999 89999999998654
No 392
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=94.69 E-value=0.0093 Score=57.99 Aligned_cols=69 Identities=10% Similarity=0.218 Sum_probs=46.4
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..+|+|||+|.+|..++..+.. . .|++++ ++|.|++++...-.|
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~-------------------------~-~g~~iVg~~D~dp~k~g~~i~g--------- 124 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGF-------------------------G-ESFELRGFFDVDPEKVGRPVRG--------- 124 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCC-------------------------C-SSEEEEEEEESCTTTTTCEETT---------
T ss_pred CCEEEEECccHHHHHHHHhHhh-------------------------c-CCcEEEEEEeCCHHHHhhhhcC---------
Confidence 4689999999999998875332 2 256654 579988776432211
Q ss_pred HHHHhhhcCCceEEecCHHHHhc-cCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ-KAQLIFISVNT 117 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~-~adviii~v~t 117 (598)
-.+...+++.+.++ +.|++++|+|+
T Consensus 125 ---------v~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 125 ---------GVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp ---------EEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred ---------CeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 12334567777665 58999999765
No 393
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.62 E-value=0.07 Score=55.90 Aligned_cols=108 Identities=13% Similarity=0.180 Sum_probs=74.9
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
+..+|+|+|+. .....++..|.+.|++|.+||+.... .. .+.. .++....++.++++++
T Consensus 21 ~~mkIgiIGlG----------~mG~~~A~~L~~~G~~V~v~dr~~~~--~~-~l~~--------~g~~~~~s~~e~~~~a 79 (358)
T 4e21_A 21 QSMQIGMIGLG----------RMGADMVRRLRKGGHECVVYDLNVNA--VQ-ALER--------EGIAGARSIEEFCAKL 79 (358)
T ss_dssp -CCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHH--HH-HHHT--------TTCBCCSSHHHHHHHS
T ss_pred cCCEEEEECch----------HHHHHHHHHHHhCCCEEEEEeCCHHH--HH-HHHH--------CCCEEeCCHHHHHhcC
Confidence 46799999983 57789999999999999999985322 21 1110 1335677899999888
Q ss_pred ---CEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCCh------hhhhhccceee
Q psy11160 473 ---HAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNH------DALLDIGFNVH 522 (598)
Q Consensus 473 ---dalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~------~~~~~~G~~y~ 522 (598)
|+||+++......+ -+..+...+.+..+|+|..+.... +.+.+.|+.|.
T Consensus 80 ~~~DvVi~~vp~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 80 VKPRVVWLMVPAAVVDS-MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp CSSCEEEECSCGGGHHH-HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCEEEEeCCHHHHHH-HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence 99999998874333 235566666666799999998732 23334566553
No 394
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.58 E-value=0.02 Score=57.40 Aligned_cols=74 Identities=11% Similarity=0.121 Sum_probs=49.8
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH-------HHHHHHH---c
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE-------ERIRQWN---S 73 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~-------~~~~~~~---~ 73 (598)
+++|.|.|+ |++|..++..|.+ .|++|++++|++ ++.+.+. .
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~ 54 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIK---------------------------AGNPTYALVRKTITAANPETKEELIDNYQS 54 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH---------------------------HTCCEEEEECCSCCSSCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHh---------------------------CCCcEEEEECCCcccCChHHHHHHHHHHHh
Confidence 468999997 9999999999999 789999999986 5554332 1
Q ss_pred CCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 74 NKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 74 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
....+.. ..+.-..++.++++++|+||.+.+.
T Consensus 55 ~~v~~v~------------~D~~d~~~l~~~~~~~d~vi~~a~~ 86 (307)
T 2gas_A 55 LGVILLE------------GDINDHETLVKAIKQVDIVICAAGR 86 (307)
T ss_dssp TTCEEEE------------CCTTCHHHHHHHHTTCSEEEECSSS
T ss_pred CCCEEEE------------eCCCCHHHHHHHHhCCCEEEECCcc
Confidence 1111100 0011112345678899999998753
No 395
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.57 E-value=0.097 Score=54.17 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=29.3
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCC
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKS 64 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~ 64 (598)
|||.|.| .|++|..++..|.+ .|+ +|+..|++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~---------------------------~g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTS---------------------------TTDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------HCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHh---------------------------CCCCEEEEECCC
Confidence 5899999 69999999999999 788 99999985
No 396
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=94.53 E-value=0.039 Score=56.81 Aligned_cols=98 Identities=10% Similarity=0.118 Sum_probs=67.5
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-...+++.|...|.+|.+||+.....+ . . . ...-..++.++++.
T Consensus 137 l~g~tvGIiG~----------G~IG~~vA~~l~~~G~~V~~~dr~~~~~~--~-~---------~-~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 137 REEFSVGIMGA----------GVLGAKVAESLQAWGFPLRCWSRSRKSWP--G-V---------E-SYVGREELRAFLNQ 193 (315)
T ss_dssp STTCCEEEECC----------SHHHHHHHHHHHTTTCCEEEEESSCCCCT--T-C---------E-EEESHHHHHHHHHT
T ss_pred cCCCEEEEEee----------CHHHHHHHHHHHHCCCEEEEEcCCchhhh--h-h---------h-hhcccCCHHHHHhh
Confidence 47899999998 36788999999999999999998543211 0 0 0 01112578889999
Q ss_pred CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCC--CCChh
Q psy11160 472 THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRK--ILNHD 512 (598)
Q Consensus 472 adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~--i~d~~ 512 (598)
+|+|++++... +-+++=-......|++..+++|..+ +.|.+
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~ 237 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEA 237 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHH
Confidence 99999998744 3344322344567877778888765 34543
No 397
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=94.52 E-value=0.07 Score=54.35 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=62.4
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.++|+|+|+ |.+|..++..+.+ .|++ .++++++.+. +. .+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~---------------------------~g~~-~V~~VnP~~~-----g~-~i----- 53 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLE---------------------------CGTK-IVGGVTPGKG-----GQ-NV----- 53 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHH---------------------------TTCC-EEEEECTTCT-----TC-EE-----
T ss_pred CCEEEEECCCCCHHHHHHHHHHh---------------------------CCCe-EEEEeCCCCC-----Cc-eE-----
Confidence 467889999 9999999999888 6777 5666665432 10 00
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.++....+++++.+ ++|++++++|.+ .+.+++++..+. .-..+|+..+.++..
T Consensus 54 ---------~G~~vy~sl~el~~~~~~Dv~ii~vp~~---------------~~~~~v~ea~~~-Gi~~vVi~t~G~~~~ 108 (294)
T 2yv1_A 54 ---------HGVPVFDTVKEAVKETDANASVIFVPAP---------------FAKDAVFEAIDA-GIELIVVITEHIPVH 108 (294)
T ss_dssp ---------TTEEEESSHHHHHHHHCCCEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHH
T ss_pred ---------CCEeeeCCHHHHhhcCCCCEEEEccCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHH
Confidence 24667788888887 899999998643 344555555442 222345544445544
Q ss_pred HHHHH
Q psy11160 162 AAESI 166 (598)
Q Consensus 162 ~~~~~ 166 (598)
..+++
T Consensus 109 ~~~~l 113 (294)
T 2yv1_A 109 DTMEF 113 (294)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 398
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.51 E-value=0.032 Score=55.97 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=49.3
Q ss_pred CCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCC-ceEEEEeCCHHHH--HHHHcCCCCC
Q psy11160 3 QTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPN-IQVTVVDKSEERI--RQWNSNKLPI 78 (598)
Q Consensus 3 ~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~v~~~d~~~~~~--~~~~~~~~~~ 78 (598)
.+.++|.|.|+ |.+|..++..|.+ .| ++|+++++++++. +.+......+
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~~V~~~~R~~~~~~~~~l~~~~~~~ 55 (299)
T 2wm3_A 3 VDKKLVVVFGGTGAQGGSVARTLLE---------------------------DGTFKVRVVTRNPRKKAAKELRLQGAEV 55 (299)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHH---------------------------HCSSEEEEEESCTTSHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHh---------------------------cCCceEEEEEcCCCCHHHHHHHHCCCEE
Confidence 34578999998 9999999999998 67 9999999987653 2232211111
Q ss_pred CCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 79 YEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 79 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
.. ..+.-..++.++++++|+||.+.+
T Consensus 56 ~~------------~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 56 VQ------------GDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp EE------------CCTTCHHHHHHHHTTCSEEEECCC
T ss_pred EE------------ecCCCHHHHHHHHhcCCEEEEeCC
Confidence 00 001111234567888999998864
No 399
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.41 E-value=0.094 Score=52.71 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=28.8
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
.|+|.|.|+ |++|..++..|++ .|++|++++++...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~ 38 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ---------------------------NNWHAVGCGFRRAR 38 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT---------------------------TTCEEEEEC-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHh---------------------------CCCeEEEEccCCCC
Confidence 368999997 9999999999999 89999999987644
No 400
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.38 E-value=0.028 Score=56.97 Aligned_cols=74 Identities=12% Similarity=0.177 Sum_probs=49.1
Q ss_pred CCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH------HHHHHHH---c
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE------ERIRQWN---S 73 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~------~~~~~~~---~ 73 (598)
++|+|.|.|+ |++|..++..|.+ .|++|+++++++ ++.+.+. .
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~~~~~~~~~~~l~~~~~ 55 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLS---------------------------FSHPTFIYARPLTPDSTPSSVQLREEFRS 55 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHH---------------------------TTCCEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHh---------------------------CCCcEEEEECCcccccChHHHHHHHHhhc
Confidence 3578999996 9999999999999 899999999985 4444332 1
Q ss_pred CCCCCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecC
Q psy11160 74 NKLPIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 74 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~ 116 (598)
....+.. ..+.-..++.++++++|+||.+.+
T Consensus 56 ~~v~~v~------------~D~~d~~~l~~a~~~~d~vi~~a~ 86 (321)
T 3c1o_A 56 MGVTIIE------------GEMEEHEKMVSVLKQVDIVISALP 86 (321)
T ss_dssp TTCEEEE------------CCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCcEEEE------------ecCCCHHHHHHHHcCCCEEEECCC
Confidence 1111100 011111235567889999999864
No 401
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=94.37 E-value=0.083 Score=55.80 Aligned_cols=97 Identities=13% Similarity=0.190 Sum_probs=68.3
Q ss_pred cccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhc
Q psy11160 390 NTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTV 469 (598)
Q Consensus 390 ~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 469 (598)
..+.+++|||+|+ ..-...+++.|...|.+|.+|||..... . .+ ....++.+++
T Consensus 115 ~~l~gktvGIIGl----------G~IG~~vA~~l~a~G~~V~~~d~~~~~~---~---------~~----~~~~sl~ell 168 (381)
T 3oet_A 115 FSLRDRTIGIVGV----------GNVGSRLQTRLEALGIRTLLCDPPRAAR---G---------DE----GDFRTLDELV 168 (381)
T ss_dssp CCGGGCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECHHHHHT---T---------CC----SCBCCHHHHH
T ss_pred CccCCCEEEEEeE----------CHHHHHHHHHHHHCCCEEEEECCChHHh---c---------cC----cccCCHHHHH
Confidence 3578999999998 3678899999999999999999942111 0 01 1246788999
Q ss_pred cCCCEEEEEeeccc-----hhh-ccHHHHHhccCCCcEEEecCC--CCChhh
Q psy11160 470 KNTHAIVVCTEWDE-----FVT-LDYKRIYEGMMKPAYIFDGRK--ILNHDA 513 (598)
Q Consensus 470 ~~adalii~t~~~~-----f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~~ 513 (598)
+.+|+|++++.... -++ ++-. ..+.|++..+++|+.+ +.|.+.
T Consensus 169 ~~aDiV~l~~Plt~~g~~~T~~li~~~-~l~~mk~gailIN~aRG~vvde~a 219 (381)
T 3oet_A 169 QEADVLTFHTPLYKDGPYKTLHLADET-LIRRLKPGAILINACRGPVVDNAA 219 (381)
T ss_dssp HHCSEEEECCCCCCSSTTCCTTSBCHH-HHHHSCTTEEEEECSCGGGBCHHH
T ss_pred hhCCEEEEcCcCCccccccchhhcCHH-HHhcCCCCcEEEECCCCcccCHHH
Confidence 99999999987542 122 4443 4456777778888765 455433
No 402
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.36 E-value=0.11 Score=53.15 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=68.7
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCC-eEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGA-KLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~-~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
..+|+|+|+ ......++..|.+.|+ +|.+||+....+.. +.+.. .++....++.++++++
T Consensus 24 ~~~I~iIG~----------G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~-~~~~~--------~g~~~~~~~~e~~~~a 84 (312)
T 3qsg_A 24 AMKLGFIGF----------GEAASAIASGLRQAGAIDMAAYDAASAESWR-PRAEE--------LGVSCKASVAEVAGEC 84 (312)
T ss_dssp -CEEEEECC----------SHHHHHHHHHHHHHSCCEEEEECSSCHHHHH-HHHHH--------TTCEECSCHHHHHHHC
T ss_pred CCEEEEECc----------cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHH-HHHHH--------CCCEEeCCHHHHHhcC
Confidence 468999997 3577899999999999 99999985311111 11110 1346678899999999
Q ss_pred CEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCC
Q psy11160 473 HAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 473 dalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~ 509 (598)
|+||+++.-+...+ -...+...+.+..+|+|...+.
T Consensus 85 DvVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 85 DVIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp SEEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCC
T ss_pred CEEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCC
Confidence 99999998776544 2356666666667999988765
No 403
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.30 E-value=0.11 Score=54.02 Aligned_cols=98 Identities=16% Similarity=0.232 Sum_probs=70.1
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|||+|+. .-+..+++.|..-|.+|.+|||......... . ....++.++++.
T Consensus 139 l~g~tvGIiG~G----------~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-------------~-~~~~~l~ell~~ 194 (334)
T 3kb6_A 139 LNRLTLGVIGTG----------RIGSRVAMYGLAFGMKVLCYDVVKREDLKEK-------------G-CVYTSLDELLKE 194 (334)
T ss_dssp GGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHHHHT-------------T-CEECCHHHHHHH
T ss_pred ecCcEEEEECcc----------hHHHHHHHhhcccCceeeecCCccchhhhhc-------------C-ceecCHHHHHhh
Confidence 468999999983 5778899999999999999999765432111 1 234678999999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC--CCChhhh
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK--ILNHDAL 514 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~~~ 514 (598)
+|+|+++.+.-. -++ +|-+.+. .|++..+++-+.+ +.|.+.+
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~-~mk~~a~lIN~aRG~iVde~aL 240 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERIS-LMKDGVYLINTARGKVVDTDAL 240 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHH-HSCTTEEEEECSCGGGBCHHHH
T ss_pred CCEEEEcCCCChhhccCcCHHHHh-hcCCCeEEEecCccccccHHHH
Confidence 999999887543 333 5655554 6777667776654 5666544
No 404
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.30 E-value=0.046 Score=57.11 Aligned_cols=29 Identities=21% Similarity=0.445 Sum_probs=22.6
Q ss_pred CCceEEEEC-CChhHHHHHHHHHHhCCCCcc
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIALKCPNIQV 33 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~~~~~~~~ 33 (598)
+++||+|+| .|++|..+...|.. .|++++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~-~p~~el 32 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAK-HPYLEL 32 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTT-CSSEEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHh-CCCcEE
Confidence 357999999 79999999998876 344433
No 405
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.28 E-value=0.015 Score=60.33 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=20.2
Q ss_pred CceEEEECCChhHHHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~ 26 (598)
.+||+|||+|.||..++..+..
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~ 24 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLE 24 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHh
Confidence 4689999999999999999987
No 406
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=94.27 E-value=0.064 Score=54.54 Aligned_cols=32 Identities=22% Similarity=0.403 Sum_probs=29.3
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS 64 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 64 (598)
|+|.|.| .|++|..++..|++ .|++|+++|++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~ 34 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALS---------------------------QGIDLIVFDNL 34 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEECC
T ss_pred cEEEEeCCCchhHHHHHHHHHh---------------------------CCCEEEEEeCC
Confidence 6899999 59999999999999 89999999974
No 407
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.26 E-value=0.26 Score=49.94 Aligned_cols=35 Identities=14% Similarity=0.366 Sum_probs=31.0
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE 66 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~ 66 (598)
.++|.|.| .|++|..++..|.+ .|++|+++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~---------------------------~G~~V~~~~r~~~ 44 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQ---------------------------KGYAVNTTVRDPD 44 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCTT
T ss_pred CCEEEEECCchHHHHHHHHHHHH---------------------------CCCEEEEEEcCcc
Confidence 36899999 69999999999999 8999999888764
No 408
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=94.26 E-value=0.099 Score=54.17 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=65.5
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||..... ..+ + ..+..++.++++.
T Consensus 144 l~g~~vgIiG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~------------~~~~~~l~ell~~ 199 (333)
T 1j4a_A 144 VRDQVVGVVGT----------GHIGQVFMQIMEGFGAKVITYDIFRNPE-LEK-K------------GYYVDSLDDLYKQ 199 (333)
T ss_dssp GGGSEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-T------------TCBCSCHHHHHHH
T ss_pred CCCCEEEEEcc----------CHHHHHHHHHHHHCCCEEEEECCCcchh-HHh-h------------CeecCCHHHHHhh
Confidence 36889999998 3577889999999999999999976543 211 1 1233478889999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++.... .++ ++ ....+.|++..+++|...
T Consensus 200 aDvV~l~~p~~~~t~~li~-~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMIN-DESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp CSEEEECSCCCGGGTTCBS-HHHHHHSCTTEEEEECSC
T ss_pred CCEEEEcCCCcHHHHHHHh-HHHHhhCCCCcEEEECCC
Confidence 999999988643 333 33 334456776678887654
No 409
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.26 E-value=0.036 Score=56.21 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=32.5
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
||.+.++|+|||.|..|+..|..|++ .|++|+++|.++
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~---------------------------~g~~v~lie~~~ 38 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGM---------------------------RGLSFRFVDPLP 38 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEESSS
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHh---------------------------CCCCEEEEeCCC
Confidence 66666789999999999999999999 789999999864
No 410
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.24 E-value=0.46 Score=48.42 Aligned_cols=98 Identities=9% Similarity=0.048 Sum_probs=62.7
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
..++|..||+|..|.+.. .+++. .|.+|+++|+|++.++..++.
T Consensus 122 ~g~rVLDIGcG~G~~ta~-~lA~~--------------------------~ga~V~gIDis~~~l~~Ar~~--------- 165 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGI-LLSHV--------------------------YGMRVNVVEIEPDIAELSRKV--------- 165 (298)
T ss_dssp TTCEEEEECCCSSCHHHH-HHHHT--------------------------TCCEEEEEESSHHHHHHHHHH---------
T ss_pred CcCEEEEECCCccHHHHH-HHHHc--------------------------cCCEEEEEECCHHHHHHHHHH---------
Confidence 457999999999765533 34551 578999999999999876642
Q ss_pred HHHHhh-hcCCceEE-ecCHHHH-hccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 84 DEVVKK-TRDVNLFF-STDIKSA-IQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 84 ~~~~~~-~~~~~~~~-~~~~~~~-~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
+.+ .. .++++ ..|..+. -...|+|+++...+ ....+++.+.+.+++|-.++..+
T Consensus 166 ---~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~~---------------d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 166 ---IEGLGV-DGVNVITGDETVIDGLEFDVLMVAALAE---------------PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ---HHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTCS---------------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---HHhcCC-CCeEEEECchhhCCCCCcCEEEECCCcc---------------CHHHHHHHHHHHcCCCcEEEEEc
Confidence 000 01 23333 2333221 14579999874322 14567889999999988777654
No 411
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.24 E-value=0.019 Score=59.43 Aligned_cols=74 Identities=14% Similarity=0.210 Sum_probs=48.5
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-CceEEEEeCCHHHHHHHHcCCCCCCCCC
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NIQVTVVDKSEERIRQWNSNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~~~~~~~~~~~~~~~~e~~ 82 (598)
+|+|.|.| .|++|..++..|.+ . |++|+++++++++...+... ++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~---------------------------~~g~~V~~~~r~~~~~~~~~~~------~~ 70 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILE---------------------------TTDWEVFGMDMQTDRLGDLVKH------ER 70 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHH---------------------------HSSCEEEEEESCCTTTGGGGGS------TT
T ss_pred CCEEEEECCCChHHHHHHHHHHh---------------------------CCCCEEEEEeCChhhhhhhccC------CC
Confidence 47899999 59999999999998 5 89999999987665443321 00
Q ss_pred hHHHHhhhcCCceE-EecCHHHHhccCcEEEEecC
Q psy11160 83 LDEVVKKTRDVNLF-FSTDIKSAIQKAQLIFISVN 116 (598)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~~~~~~~~adviii~v~ 116 (598)
+. .+...+. -..++.++++++|+||-+..
T Consensus 71 v~-----~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 71 MH-----FFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp EE-----EEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred eE-----EEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 00 0000111 11223456778999998764
No 412
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=94.17 E-value=0.11 Score=53.96 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=68.8
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||..... ..+ ...+ .++.++++.
T Consensus 143 l~g~~vgIiG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-------------~~~~-~~l~ell~~ 197 (333)
T 1dxy_A 143 LGQQTVGVMGT----------GHIGQVAIKLFKGFGAKVIAYDPYPMKG-DHP-------------DFDY-VSLEDLFKQ 197 (333)
T ss_dssp GGGSEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCSS-CCT-------------TCEE-CCHHHHHHH
T ss_pred CCCCEEEEECc----------CHHHHHHHHHHHHCCCEEEEECCCcchh-hHh-------------cccc-CCHHHHHhc
Confidence 46899999998 3678889999999999999999976432 110 1122 378899999
Q ss_pred CCEEEEEeeccc-hhh-ccHHHHHhccCCCcEEEecCC--CCChhhh
Q psy11160 472 THAIVVCTEWDE-FVT-LDYKRIYEGMMKPAYIFDGRK--ILNHDAL 514 (598)
Q Consensus 472 adalii~t~~~~-f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~~~ 514 (598)
+|+|++++.... .++ ++ ....+.|++..+++|... +.|.+.+
T Consensus 198 aDvV~~~~P~~~~t~~li~-~~~l~~mk~ga~lIn~srg~~vd~~aL 243 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIIN-EAAFNLMKPGAIVINTARPNLIDTQAM 243 (333)
T ss_dssp CSEEEECCCCCGGGTTSBC-HHHHHHSCTTEEEEECSCTTSBCHHHH
T ss_pred CCEEEEcCCCchhHHHHhC-HHHHhhCCCCcEEEECCCCcccCHHHH
Confidence 999999987654 333 33 334556877778888765 3454433
No 413
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=94.14 E-value=0.039 Score=57.93 Aligned_cols=26 Identities=19% Similarity=0.266 Sum_probs=22.4
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~ 26 (598)
|..+.++|+|||.|..|+.+|..|++
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~ 26 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRD 26 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHh
Confidence 44445789999999999999999999
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.13 E-value=0.056 Score=54.87 Aligned_cols=95 Identities=15% Similarity=0.074 Sum_probs=64.3
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEe-cCChhhhccCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSI-LDDPYDTVKNT 472 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~a 472 (598)
..+|+|+|+. .....++..|.+.|.+|.+||+.....+. +.. .| ... ..++.++++++
T Consensus 7 ~~~I~iIG~G----------~mG~~~a~~l~~~G~~V~~~dr~~~~~~~---~~~----~g----~~~~~~~~~e~~~~a 65 (303)
T 3g0o_A 7 DFHVGIVGLG----------SMGMGAARSCLRAGLSTWGADLNPQACAN---LLA----EG----ACGAAASAREFAGVV 65 (303)
T ss_dssp CCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHH---HHH----TT----CSEEESSSTTTTTTC
T ss_pred CCeEEEECCC----------HHHHHHHHHHHHCCCeEEEEECCHHHHHH---HHH----cC----CccccCCHHHHHhcC
Confidence 4689999973 57788999999999999999985332111 110 12 233 67889999999
Q ss_pred CEEEEEeeccc-hhhccH--HHHHhccCCCcEEEecCCCC
Q psy11160 473 HAIVVCTEWDE-FVTLDY--KRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 473 dalii~t~~~~-f~~ld~--~~l~~~m~~~~iI~D~r~i~ 509 (598)
|+||+++..+. .+..=+ +.+...+++..+|+|..++.
T Consensus 66 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~ 105 (303)
T 3g0o_A 66 DALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTIS 105 (303)
T ss_dssp SEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCC
T ss_pred CEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCC
Confidence 99999998753 222100 22334455566999998764
No 415
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.13 E-value=0.22 Score=51.16 Aligned_cols=76 Identities=14% Similarity=0.229 Sum_probs=53.1
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCC---HHHHHHHHcCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKS---EERIRQWNSNKLPIYE 80 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~---~~~~~~~~~~~~~~~e 80 (598)
.+++.|+|+|-+|.+++..|++ .|. +|++++|+ .++.+.+.+.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~---------------------------~G~~~v~v~nRt~~~~~~a~~la~~------ 194 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAI---------------------------EGIKEIKLFNRKDDFFEKAVAFAKR------ 194 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCSEEEEEECSSTHHHHHHHHHHH------
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------cCCCEEEEEECCCchHHHHHHHHHH------
Confidence 3689999999999999999999 787 89999999 8888776531
Q ss_pred CChHHHHhhhcCCceEEe--cCH---HHHhccCcEEEEecCCCC
Q psy11160 81 PGLDEVVKKTRDVNLFFS--TDI---KSAIQKAQLIFISVNTPT 119 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~---~~~~~~adviii~v~tp~ 119 (598)
+.......+... .+. .+.+.++|+||-|+|...
T Consensus 195 ------~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 195 ------VNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGM 232 (312)
T ss_dssp ------HHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTS
T ss_pred ------hhhccCcceEEechHhhhhhHhhccCceEEEECCcCCC
Confidence 110001112221 232 456789999999976543
No 416
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.04 E-value=0.023 Score=55.17 Aligned_cols=71 Identities=11% Similarity=0.258 Sum_probs=45.7
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEE-EEeCCHH-HHHH-HHcCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVT-VVDKSEE-RIRQ-WNSNKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~~~-~~~~-~~~~~~~~~e~ 81 (598)
..+++|+|+|.+|..++..+.. ...|++++ ++|.|++ ++.. .-.| .|
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~-------------------------~~~g~~iVg~~D~dp~~kiG~~~i~G-vp---- 133 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFH-------------------------DRNKMQISMAFDLDSNDLVGKTTEDG-IP---- 133 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCC-------------------------TTSSEEEEEEEECTTSTTTTCBCTTC-CB----
T ss_pred CCEEEEECcCHHHHHHHHhhhc-------------------------ccCCeEEEEEEeCCchhccCceeECC-eE----
Confidence 4689999999999998765321 12577755 5799987 6532 1112 12
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTP 118 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp 118 (598)
+....++++.++ +.|++++|+|..
T Consensus 134 -------------V~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 134 -------------VYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp -------------EEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred -------------EeCHHHHHHHHHHcCCCEEEEecCch
Confidence 233456666665 489999998653
No 417
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=94.03 E-value=0.17 Score=55.16 Aligned_cols=113 Identities=17% Similarity=0.233 Sum_probs=68.3
Q ss_pred CCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH-HHHHHcCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER-IRQWNSNKLPIYE 80 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~-~~~~~~~~~~~~e 80 (598)
+.+++|.|||+|-.|.+ +|..|.+ .|++|+++|..... .+.+.+....
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~---------------------------~G~~V~~~D~~~~~~~~~l~~~gi~--- 66 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLAN---------------------------EGYQISGSDLAPNPVTQQLMNLGAT--- 66 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHH---------------------------TTCEEEEECSSCCHHHHHHHHTTCE---
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHh---------------------------CCCeEEEECCCCCHHHHHHHHCCCE---
Confidence 45678999999999997 8999988 89999999986432 2333321111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHH-------HHHHHHHHHHHcCCCcEEE
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKY-------VEAAARMIAEIATDNKIVV 153 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~ivv 153 (598)
+..-.+. +.++++|+||++-.-|.+ .+.+.. +....+.++..++...+|-
T Consensus 67 --------------~~~g~~~-~~~~~a~~vv~s~~i~~~--------~p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~ 123 (491)
T 2f00_A 67 --------------IYFNHRP-ENVRDASVVVVSSAISAD--------NPEIVAAHEARIPVIRRAEMLAELMRFRHGIA 123 (491)
T ss_dssp --------------EESSCCG-GGGTTCSEEEECTTCCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEE
T ss_pred --------------EECCCCH-HHcCCCCEEEECCCCCCC--------CHHHHHHHHcCCcEEEHHHHHHHHHcCCCEEE
Confidence 1111122 246789998887433321 111111 0111233444455457888
Q ss_pred EecCCchHHHHHHHH
Q psy11160 154 EKSTVPVRAAESIMN 168 (598)
Q Consensus 154 ~~STv~~~~~~~~~~ 168 (598)
+..|---+||-.+..
T Consensus 124 VTGTnGKTTTt~ml~ 138 (491)
T 2f00_A 124 IAGTHGKTTTTAMVS 138 (491)
T ss_dssp EESSSCHHHHHHHHH
T ss_pred EECCCCHHHHHHHHH
Confidence 889988888766554
No 418
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=93.92 E-value=0.059 Score=54.87 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCCCCceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH
Q psy11160 1 MVQTISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE 66 (598)
Q Consensus 1 m~~~~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~ 66 (598)
|-.+.++|.|.| .|++|..++..|.+ .|++|++++++++
T Consensus 1 ~~~~~~~vlVTGatGfIG~~l~~~L~~---------------------------~G~~V~~~~r~~~ 40 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLLE---------------------------RGYTVRATVRDPT 40 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCTT
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHH---------------------------CCCEEEEEECCcc
Confidence 333457899998 79999999999999 8999999998876
No 419
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=93.92 E-value=0.25 Score=44.32 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=52.6
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
+.++|+|.|++-+++ +.+-.+++.|.+.|++|...+|... ++ . +.....++.++.+..
T Consensus 13 ~p~~IavIGaS~~~g------~~G~~~~~~L~~~G~~V~~vnp~~~--~i-----------~---G~~~~~s~~el~~~v 70 (138)
T 1y81_A 13 EFRKIALVGASKNPA------KYGNIILKDLLSKGFEVLPVNPNYD--EI-----------E---GLKCYRSVRELPKDV 70 (138)
T ss_dssp -CCEEEEETCCSCTT------SHHHHHHHHHHHTTCEEEEECTTCS--EE-----------T---TEECBSSGGGSCTTC
T ss_pred CCCeEEEEeecCCCC------CHHHHHHHHHHHCCCEEEEeCCCCC--eE-----------C---CeeecCCHHHhCCCC
Confidence 568999999987774 6889999999999999888899642 11 1 235556788888889
Q ss_pred CEEEEEeec
Q psy11160 473 HAIVVCTEW 481 (598)
Q Consensus 473 dalii~t~~ 481 (598)
|++++++.-
T Consensus 71 Dlvii~vp~ 79 (138)
T 1y81_A 71 DVIVFVVPP 79 (138)
T ss_dssp CEEEECSCH
T ss_pred CEEEEEeCH
Confidence 999999984
No 420
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.89 E-value=0.047 Score=56.96 Aligned_cols=25 Identities=24% Similarity=0.462 Sum_probs=20.0
Q ss_pred CCCCCceEEEEC-CChhHHHHHHHHHH
Q psy11160 1 MVQTISHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 1 m~~~~~~I~viG-~G~vG~~~a~~la~ 26 (598)
||+ ++||+|+| .|++|..+...|..
T Consensus 1 M~~-~~kV~IiGAtG~iG~~llr~L~~ 26 (345)
T 2ozp_A 1 MTG-KKTLSIVGASGYAGGEFLRLALS 26 (345)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHT
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHHc
Confidence 443 47999999 69999999999987
No 421
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.88 E-value=0.06 Score=55.24 Aligned_cols=73 Identities=8% Similarity=0.164 Sum_probs=49.4
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH----HHHHHHH---cCCCC
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE----ERIRQWN---SNKLP 77 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~----~~~~~~~---~~~~~ 77 (598)
|+|.|.|+ |++|..++..|.+ .|++|++++|++ ++.+.+. .....
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~ 63 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLD---------------------------AHRPTYILARPGPRSPSKAKIFKALEDKGAI 63 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHH---------------------------TTCCEEEEECSSCCCHHHHHHHHHHHHTTCE
T ss_pred CeEEEECCCcHHHHHHHHHHHH---------------------------CCCCEEEEECCCCCChhHHHHHHHHHhCCcE
Confidence 68999998 9999999999999 789999999976 5555332 11111
Q ss_pred CCCCChHHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCC
Q psy11160 78 IYEPGLDEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNT 117 (598)
Q Consensus 78 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~t 117 (598)
+.. ..+.-..++.++++ ++|+||.+.+.
T Consensus 64 ~~~------------~Dl~d~~~l~~~~~~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 64 IVY------------GLINEQEAMEKILKEHEIDIVVSTVGG 93 (346)
T ss_dssp EEE------------CCTTCHHHHHHHHHHTTCCEEEECCCG
T ss_pred EEE------------eecCCHHHHHHHHhhCCCCEEEECCch
Confidence 111 11111123455677 89999998643
No 422
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.86 E-value=0.011 Score=57.31 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=31.1
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc--eEEEEeCCHHH
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI--QVTVVDKSEER 67 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~~~~ 67 (598)
++|.|.| .|.+|..++..|++ .|+ +|+++++++++
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~---------------------------~G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILE---------------------------QGLFSKVTLIGRRKLT 56 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHH---------------------------HTCCSEEEEEESSCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHc---------------------------CCCCCEEEEEEcCCCC
Confidence 6899999 59999999999999 788 99999998654
No 423
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=93.82 E-value=0.076 Score=53.60 Aligned_cols=107 Identities=15% Similarity=0.168 Sum_probs=65.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.+++.|+|+|-+|.++|..|++ .| +|++++++.++.+.+.+.. .
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~---------------------------~G-~V~v~~r~~~~~~~l~~~~--------~ 171 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAK---------------------------DN-NIIIANRTVEKAEALAKEI--------A 171 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTS---------------------------SS-EEEEECSSHHHHHHHHHHH--------H
T ss_pred CCEEEEECchHHHHHHHHHHHH---------------------------CC-CEEEEECCHHHHHHHHHHH--------h
Confidence 3689999999999999999999 89 9999999999887765310 0
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCch
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPV 160 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~ 160 (598)
..........+..+ +..+.+.++|++|.++|.+..... ....+ . -...++++.+|++.++.|.
T Consensus 172 ~~~~~~~~~~~d~~-~~~~~~~~~DilVn~ag~~~~~~~----~~~~~---~-----~~~~l~~~~~v~Dv~y~p~ 234 (287)
T 1nvt_A 172 EKLNKKFGEEVKFS-GLDVDLDGVDIIINATPIGMYPNI----DVEPI---V-----KAEKLREDMVVMDLIYNPL 234 (287)
T ss_dssp HHHTCCHHHHEEEE-CTTCCCTTCCEEEECSCTTCTTCC----SSCCS---S-----CSTTCCSSSEEEECCCSSS
T ss_pred hhcccccceeEEEe-eHHHhhCCCCEEEECCCCCCCCCC----CCCCC---C-----CHHHcCCCCEEEEeeeCCc
Confidence 00000000012222 224457789999999876542110 00000 0 0124567888888887554
No 424
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.73 E-value=0.14 Score=51.93 Aligned_cols=38 Identities=16% Similarity=0.335 Sum_probs=33.2
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC-CceEEEEeCCHHHHHH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP-NIQVTVVDKSEERIRQ 70 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~~~~~~~ 70 (598)
|+|.|.|+ |++|..++..|.+ . |++|+++++++++.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~---------------------------~~g~~V~~~~r~~~~~~~ 40 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLR---------------------------EDHYEVYGLDIGSDAISR 40 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH---------------------------STTCEEEEEESCCGGGGG
T ss_pred CeEEEECCCcHHHHHHHHHHHH---------------------------hCCCEEEEEeCCcchHHH
Confidence 58999997 9999999999999 6 8999999998766543
No 425
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.72 E-value=0.18 Score=54.69 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=67.5
Q ss_pred CCCceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH-HHHHHcCCCCCCC
Q psy11160 3 QTISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER-IRQWNSNKLPIYE 80 (598)
Q Consensus 3 ~~~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~-~~~~~~~~~~~~e 80 (598)
+.+++|.|||+|-.|.+ +|..|.+ .|++|+++|..... .+.+.+...
T Consensus 16 ~~~~~i~viG~G~sG~s~~A~~l~~---------------------------~G~~V~~~D~~~~~~~~~l~~~gi---- 64 (475)
T 1p3d_A 16 RRVQQIHFIGIGGAGMSGIAEILLN---------------------------EGYQISGSDIADGVVTQRLAQAGA---- 64 (475)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHH---------------------------HTCEEEEEESCCSHHHHHHHHTTC----
T ss_pred ccCCEEEEEeecHHHHHHHHHHHHh---------------------------CCCEEEEECCCCCHHHHHHHhCCC----
Confidence 44678999999999997 9999988 79999999986532 233332111
Q ss_pred CChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCC---CCCCCcchHHHHHHHHHHHHHcCCCcEEEEecC
Q psy11160 81 PGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGN---GKGRAADLKYVEAAARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~ST 157 (598)
.+..-.+. +.++++|+||++-.-|.+.... .+.+-+-+.. .+.++..++...+|-+..|
T Consensus 65 -------------~~~~g~~~-~~~~~a~~vv~s~~i~~~~~~~~~a~~~~i~vl~~----~~~l~~~~~~~~vI~VTGT 126 (475)
T 1p3d_A 65 -------------KIYIGHAE-EHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQR----AQMLAEIMRFRHGIAVAGT 126 (475)
T ss_dssp -------------EEEESCCG-GGGTTCSEEEECTTSCTTCHHHHHHHHTTCCEEEH----HHHHHHHHHTSEEEEEESS
T ss_pred -------------EEECCCCH-HHcCCCCEEEECCCCCCCCHHHHHHHHcCCcEEEH----HHHHHHHhcCCCEEEEECC
Confidence 11111223 2467899988874333210000 0000011111 1233334444578888899
Q ss_pred CchHHHHHHHH
Q psy11160 158 VPVRAAESIMN 168 (598)
Q Consensus 158 v~~~~~~~~~~ 168 (598)
---+||-.+..
T Consensus 127 nGKTTTt~ml~ 137 (475)
T 1p3d_A 127 HGKTTTTAMIS 137 (475)
T ss_dssp SCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 88888866554
No 426
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=93.65 E-value=0.11 Score=54.45 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=19.6
Q ss_pred ceEEEEC-CChhHHHHHHHHHH
Q psy11160 6 SHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~ 26 (598)
+||+|+| .|++|..+...|..
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~ 38 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLAN 38 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHT
T ss_pred cEEEEECcCCHHHHHHHHHHHc
Confidence 6899999 89999999999987
No 427
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.64 E-value=0.25 Score=51.22 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=19.7
Q ss_pred ceEEEECCChhHHHHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~ 26 (598)
+||+|+|+|++|..++..|..
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~ 24 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQ 24 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHT
T ss_pred eEEEEECcCHHHHHHHHHHhC
Confidence 699999999999999999887
No 428
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=93.59 E-value=0.15 Score=52.07 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=62.1
Q ss_pred CCCceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 3 QTISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 3 ~~~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
+..++|+|+|+ |.+|..++..+.+ .|++ .++.+++.+. +. .+
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~---------------------------~g~~-~v~~VnP~~~-----g~-~i--- 53 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLE---------------------------YGTK-VVAGVTPGKG-----GS-EV--- 53 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHH---------------------------HTCE-EEEEECTTCT-----TC-EE---
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHh---------------------------CCCc-EEEEeCCCCC-----Cc-eE---
Confidence 34567888898 9999999998888 5777 5566655422 10 00
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhc--c-CcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQ--K-AQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTV 158 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv 158 (598)
.++.+..+++++.+ . +|++++++|.+. +.+++++..+. .-..+|+..+.+
T Consensus 54 -----------~G~~vy~sl~el~~~~~~~DvaIi~vp~~~---------------~~~~v~ea~~~-Gi~~vVi~t~G~ 106 (297)
T 2yv2_A 54 -----------HGVPVYDSVKEALAEHPEINTSIVFVPAPF---------------APDAVYEAVDA-GIRLVVVITEGI 106 (297)
T ss_dssp -----------TTEEEESSHHHHHHHCTTCCEEEECCCGGG---------------HHHHHHHHHHT-TCSEEEECCCCC
T ss_pred -----------CCEeeeCCHHHHhhcCCCCCEEEEecCHHH---------------HHHHHHHHHHC-CCCEEEEECCCC
Confidence 24677788887776 4 999999986542 44455555443 222355555555
Q ss_pred chHHHHHH
Q psy11160 159 PVRAAESI 166 (598)
Q Consensus 159 ~~~~~~~~ 166 (598)
+....+++
T Consensus 107 ~~~~~~~l 114 (297)
T 2yv2_A 107 PVHDTMRF 114 (297)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 54333333
No 429
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=93.57 E-value=0.17 Score=51.96 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=64.4
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||...... +. ..++.++++.
T Consensus 142 l~g~~vgIIG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 142 LQGLTLGLVGM----------GRIGQAVAKRALAFGMRVVYHARTPKPLP-----------------YP-FLSLEELLKE 193 (311)
T ss_dssp CTTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCSSS-----------------SC-BCCHHHHHHH
T ss_pred CCCCEEEEEEE----------CHHHHHHHHHHHHCCCEEEEECCCCcccc-----------------cc-cCCHHHHHhh
Confidence 46899999998 35778899999999999999999654221 11 2567889999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++... +.++ ++- .....|++..+++|..+
T Consensus 194 aDvV~l~~p~~~~t~~li~~-~~l~~mk~ga~lin~sr 230 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNR-ERLFAMKRGAILLNTAR 230 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCH-HHHTTSCTTCEEEECSC
T ss_pred CCEEEEeCCCChHHHhhcCH-HHHhhCCCCcEEEECCC
Confidence 99999998765 3333 333 34456777778888766
No 430
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.56 E-value=0.11 Score=54.39 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=24.6
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceecc
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVD 37 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~ 37 (598)
|.||+|||+ ||+|.-+...|.. .|.+++..+.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~-hP~~el~~l~ 45 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKN-HPEAKITYLS 45 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHc-CCCcEEEEEe
Confidence 468999975 9999999999998 4555544433
No 431
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.52 E-value=0.13 Score=52.60 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=31.1
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
+|+|.|.|+ |++|..++..|++ .|++|+++++++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~ 61 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLK---------------------------LDQKVVGLDNFA 61 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEECCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---------------------------CCCEEEEEeCCC
Confidence 478999998 9999999999999 899999999864
No 432
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.52 E-value=0.058 Score=55.05 Aligned_cols=33 Identities=27% Similarity=0.286 Sum_probs=30.2
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS 64 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 64 (598)
..+|+|||.|..|+++|..|++ .|++|+++|++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~---------------------------~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA---------------------------GGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh---------------------------CCCeEEEEeCC
Confidence 4689999999999999999999 78999999875
No 433
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.49 E-value=0.051 Score=60.17 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=35.8
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQW 71 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~ 71 (598)
++|.|+|+|.+|..+|..|.+ .|++|+++|.|+++++.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~---------------------------~g~~v~vid~d~~~~~~~ 387 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDR---------------------------KPVPFILIDRQESPVCND 387 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEESSCCSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHH---------------------------CCCCEEEEECChHHHhhc
Confidence 689999999999999999999 899999999999887643
No 434
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=93.46 E-value=0.038 Score=58.75 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=27.3
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhC----CCCcceecccc
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKC----PNIQVTVVDKR 39 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~----~~~~~~~~~~~ 39 (598)
|.+++++|+|||+|..|++.|..|++.- |+++|+++|++
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~ 43 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEAS 43 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECC
Confidence 5555678999999999999999999942 33555555554
No 435
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.44 E-value=0.1 Score=51.32 Aligned_cols=99 Identities=16% Similarity=0.098 Sum_probs=64.6
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChh-------h-----hhhhhhcccccccCCCc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPS-------Q-----IIQDLKELDPELLDHNA 458 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~-------~-----~~~~~~~~~~~~~~~~~ 458 (598)
.+..++|+|+|+ .+.+..++..|.+.|.+|.+||...... + .. .+.. ..+.
T Consensus 16 ~~~~~kIgiIG~----------G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~-- 78 (245)
T 3dtt_A 16 YFQGMKIAVLGT----------GTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFS-QWLP----EHPH-- 78 (245)
T ss_dssp ---CCEEEEECC----------SHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHH-HHGG----GSTT--
T ss_pred ccCCCeEEEECC----------CHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhh-HHHh----hcCc--
Confidence 457899999997 3678899999999999999999753320 0 11 1100 0111
Q ss_pred eEecCChhhhccCCCEEEEEeeccchhhccHHHH-HhccCCCcEEEecCCCC
Q psy11160 459 VSILDDPYDTVKNTHAIVVCTEWDEFVTLDYKRI-YEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 459 ~~~~~~~~~al~~adalii~t~~~~f~~ld~~~l-~~~m~~~~iI~D~r~i~ 509 (598)
....++.++++++|+||+++......+. ...+ ...+ +..+|+|..|-+
T Consensus 79 -~~~~~~~e~~~~aDvVilavp~~~~~~~-~~~i~~~~l-~g~ivi~~s~~~ 127 (245)
T 3dtt_A 79 -VHLAAFADVAAGAELVVNATEGASSIAA-LTAAGAENL-AGKILVDIANPL 127 (245)
T ss_dssp -CEEEEHHHHHHHCSEEEECSCGGGHHHH-HHHHCHHHH-TTSEEEECCCCE
T ss_pred -eeccCHHHHHhcCCEEEEccCcHHHHHH-HHHhhhhhc-CCCEEEECCCCC
Confidence 2356788899999999999998765542 1233 2233 455999999744
No 436
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.44 E-value=0.11 Score=52.52 Aligned_cols=54 Identities=24% Similarity=0.435 Sum_probs=44.5
Q ss_pred CceEEEECCCh-hHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCC--CceEEEEeCCHHHHHHHHcCCCCCCCC
Q psy11160 5 ISHICCIGAGY-VGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCP--NIQVTVVDKSEERIRQWNSNKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~-vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~v~~~d~~~~~~~~~~~~~~~~~e~ 81 (598)
..++.|||.|. ||.++|..|.. . |..|++.++.
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~---------------------------~g~~atVtv~h~~----------------- 193 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTR---------------------------RSENATVTLCHTG----------------- 193 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTS---------------------------TTTCCEEEEECTT-----------------
T ss_pred CCEEEEECCCcHHHHHHHHHHhc---------------------------CCCCCEEEEEECc-----------------
Confidence 36899999996 69999999988 6 7889988532
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCC
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTP 118 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp 118 (598)
+.++.+.+++||+||.+++.|
T Consensus 194 ----------------t~~L~~~~~~ADIVI~Avg~p 214 (281)
T 2c2x_A 194 ----------------TRDLPALTRQADIVVAAVGVA 214 (281)
T ss_dssp ----------------CSCHHHHHTTCSEEEECSCCT
T ss_pred ----------------hhHHHHHHhhCCEEEECCCCC
Confidence 245677899999999999877
No 437
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=93.42 E-value=0.14 Score=52.92 Aligned_cols=90 Identities=11% Similarity=0.082 Sum_probs=64.7
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
+.+++|+|+|+ ..-+..+++.|...|.+|.+|||..... ..+ .+.+ .++.++++.
T Consensus 144 l~g~~vgIiG~----------G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-------------~~~~-~~l~ell~~ 198 (331)
T 1xdw_A 144 VRNCTVGVVGL----------GRIGRVAAQIFHGMGATVIGEDVFEIKG-IED-------------YCTQ-VSLDEVLEK 198 (331)
T ss_dssp GGGSEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSSCCCS-CTT-------------TCEE-CCHHHHHHH
T ss_pred CCCCEEEEECc----------CHHHHHHHHHHHHCCCEEEEECCCccHH-HHh-------------cccc-CCHHHHHhh
Confidence 46899999998 3577889999999999999999976432 110 1122 378889999
Q ss_pred CCEEEEEeecc-chhh-ccHHHHHhccCCCcEEEecCC
Q psy11160 472 THAIVVCTEWD-EFVT-LDYKRIYEGMMKPAYIFDGRK 507 (598)
Q Consensus 472 adalii~t~~~-~f~~-ld~~~l~~~m~~~~iI~D~r~ 507 (598)
+|+|++++... +.++ ++ ....+.|++..+++|...
T Consensus 199 aDvV~~~~p~t~~t~~li~-~~~l~~mk~ga~lin~sr 235 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVT-RDFLKKMKDGAILVNCAR 235 (331)
T ss_dssp CSEEEECCCCCTTTCCSBC-HHHHHTSCTTEEEEECSC
T ss_pred CCEEEEecCCchHHHHHhC-HHHHhhCCCCcEEEECCC
Confidence 99999987754 3333 33 334556777778888765
No 438
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=93.38 E-value=0.017 Score=59.09 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=20.7
Q ss_pred CCceEEEECC-ChhHHHHHHHHHH
Q psy11160 4 TISHICCIGA-GYVGGPTCSVIAL 26 (598)
Q Consensus 4 ~~~~I~viG~-G~vG~~~a~~la~ 26 (598)
++|+|.|.|+ |++|..++..|.+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~ 46 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQ 46 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHHh
Confidence 4579999998 9999999999999
No 439
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=93.38 E-value=0.024 Score=58.03 Aligned_cols=37 Identities=30% Similarity=0.535 Sum_probs=30.7
Q ss_pred CCceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 4 TISHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 4 ~~~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
.||+|.|.| .|++|..++..|++ ++.|++|+++++++
T Consensus 3 ~m~~vlVTGatG~iG~~l~~~L~~-------------------------~~~g~~V~~~~r~~ 40 (348)
T 1oc2_A 3 QFKNIIVTGGAGFIGSNFVHYVYN-------------------------NHPDVHVTVLDKLT 40 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHH-------------------------HCTTCEEEEEECCC
T ss_pred cCcEEEEeCCccHHHHHHHHHHHH-------------------------hCCCCEEEEEeCCC
Confidence 357899999 59999999999998 11289999999864
No 440
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=93.37 E-value=0.43 Score=47.99 Aligned_cols=59 Identities=19% Similarity=0.285 Sum_probs=48.3
Q ss_pred CceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchHHHHH
Q psy11160 93 VNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVRAAES 165 (598)
Q Consensus 93 ~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~~~~~ 165 (598)
.+++.++|..+|++++|++|+= ||+.. .-..+++.|.++++.|.||....|+||-..-.
T Consensus 127 aGVkVtsDD~EAvk~AEi~Ilf--tPfG~------------~t~~Iakkii~~lpEgAII~nTCTipp~~ly~ 185 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITW--LPKGN------------KQPDIIKKFADAIPEGAIVTHACTIPTTKFAK 185 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEEC--CTTCT------------THHHHHHHHGGGSCTTCEEEECSSSCHHHHHH
T ss_pred cCcEeecchHHHhcCCCEEEEe--cCCCC------------CcHHHHHHHHhhCcCCCEEecccCCCHHHHHH
Confidence 4788999999999999999988 45421 23567889999999999999999999866533
No 441
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.34 E-value=0.052 Score=57.00 Aligned_cols=38 Identities=26% Similarity=0.438 Sum_probs=30.7
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
|.+...+|+|||+|..|+.+|..|++ .|++|+++|+++
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~---------------------------~G~~V~v~E~~~ 38 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNK---------------------------SGFKVKIVEKQK 38 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEECSSC
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHh---------------------------CCCCEEEEeCCC
Confidence 44444789999999999999999999 788888888763
No 442
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.30 E-value=0.23 Score=44.90 Aligned_cols=68 Identities=22% Similarity=0.263 Sum_probs=52.2
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTH 473 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ad 473 (598)
.++|+|+|++-+|+ +.+..+++.|.+.|++|...+|....+++ . +.....++.++.+..|
T Consensus 13 p~~IavIGas~~~g------~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------~---G~~~~~sl~el~~~~D 72 (145)
T 2duw_A 13 TRTIALVGASDKPD------RPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------L---GQQGYATLADVPEKVD 72 (145)
T ss_dssp CCCEEEESCCSCTT------SHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------T---TEECCSSTTTCSSCCS
T ss_pred CCEEEEECcCCCCC------ChHHHHHHHHHHCCCEEEEeCCccccccc-----------C---CeeccCCHHHcCCCCC
Confidence 57899999988775 68889999999999999999996521111 1 2344567777777899
Q ss_pred EEEEEeec
Q psy11160 474 AIVVCTEW 481 (598)
Q Consensus 474 alii~t~~ 481 (598)
++++++.-
T Consensus 73 lvii~vp~ 80 (145)
T 2duw_A 73 MVDVFRNS 80 (145)
T ss_dssp EEECCSCS
T ss_pred EEEEEeCH
Confidence 99999983
No 443
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.27 E-value=0.065 Score=54.23 Aligned_cols=33 Identities=30% Similarity=0.419 Sum_probs=30.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
++|+|||.|.+|+.+|..|++ .|++|+++|+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~---------------------------~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA---------------------------AGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH---------------------------CCCcEEEEECCC
Confidence 579999999999999999999 899999999853
No 444
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.26 E-value=0.054 Score=54.40 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=31.7
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
|||.|.|+ |++|..++..|++ .|++|++++++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~ 36 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVE---------------------------LGYEVVVVDNLSSG 36 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEECCCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHh---------------------------CCCEEEEEeCCCCC
Confidence 58999998 9999999999999 89999999987654
No 445
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=93.23 E-value=0.12 Score=53.89 Aligned_cols=21 Identities=24% Similarity=0.377 Sum_probs=19.4
Q ss_pred ceEEEEC-CChhHHHHHHHHHH
Q psy11160 6 SHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~ 26 (598)
+||+|+| .|++|..++..|..
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~ 30 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLAD 30 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT
T ss_pred ceEEEECcCCHHHHHHHHHHhc
Confidence 6999999 89999999998887
No 446
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.19 E-value=0.14 Score=52.97 Aligned_cols=94 Identities=15% Similarity=0.097 Sum_probs=64.6
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCCh-hhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEP-SQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
++++|+|+|+ .+.+-.++..|.+.|.+|.+||+.... .+.... . ++... ++.+++++
T Consensus 15 ~~~~I~IIG~----------G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~-------~----G~~~~-~~~e~~~~ 72 (338)
T 1np3_A 15 QGKKVAIIGY----------GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA-------H----GLKVA-DVKTAVAA 72 (338)
T ss_dssp HTSCEEEECC----------SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH-------T----TCEEE-CHHHHHHT
T ss_pred cCCEEEEECc----------hHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHH-------C----CCEEc-cHHHHHhc
Confidence 5679999997 367788999999999999999986543 121111 1 22333 77888999
Q ss_pred CCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCC
Q psy11160 472 THAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKI 508 (598)
Q Consensus 472 adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i 508 (598)
+|+|++++......++=-..+...+++..+|+|..++
T Consensus 73 aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 73 ADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp CSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEESCCH
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 9999999987665332111444555555688888653
No 447
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.18 E-value=0.28 Score=50.23 Aligned_cols=96 Identities=16% Similarity=0.070 Sum_probs=65.9
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCC--eEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhh-hc
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGA--KLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYD-TV 469 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-al 469 (598)
..++|+|+|+ ...+-.++..|.+.|. +|.+||+.....+.... .|.. .....++.+ ++
T Consensus 32 ~~~kI~IIG~----------G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~-------~G~~--~~~~~~~~~~~~ 92 (314)
T 3ggo_A 32 SMQNVLIVGV----------GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-------LGII--DEGTTSIAKVED 92 (314)
T ss_dssp SCSEEEEESC----------SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-------TTSC--SEEESCTTGGGG
T ss_pred CCCEEEEEee----------CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-------CCCc--chhcCCHHHHhh
Confidence 3479999997 3567789999999999 99999986432211111 1110 034567778 89
Q ss_pred cCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCC
Q psy11160 470 KNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKI 508 (598)
Q Consensus 470 ~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i 508 (598)
+++|+||+++.-....+. +..+...+.+..+|+|...+
T Consensus 93 ~~aDvVilavp~~~~~~v-l~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 93 FSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp GCCSEEEECSCGGGHHHH-HHHHHHHSCTTCEEEECCSC
T ss_pred ccCCEEEEeCCHHHHHHH-HHHHhhccCCCcEEEECCCC
Confidence 999999999987654432 34566656666799997665
No 448
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.18 E-value=0.67 Score=50.86 Aligned_cols=112 Identities=11% Similarity=0.040 Sum_probs=67.3
Q ss_pred CceEEEECCChhHHH-HHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH--HHHHHHHcCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGP-TCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE--ERIRQWNSNKLPIYEP 81 (598)
Q Consensus 5 ~~~I~viG~G~vG~~-~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~--~~~~~~~~~~~~~~e~ 81 (598)
.++|-|||.|-.|.+ +|..|.+ .|++|+++|... ...+.|.+...
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~---------------------------~G~~V~~sD~~~~~~~~~~L~~~gi----- 66 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARA---------------------------LGHTVTGSDANIYPPMSTQLEQAGV----- 66 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCCCTTHHHHHHHTTC-----
T ss_pred CCEEEEEEecHhhHHHHHHHHHh---------------------------CCCEEEEECCCCCcHHHHHHHHCCC-----
Confidence 478999999999997 6777787 899999999863 33444443111
Q ss_pred ChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHH-------HHHHHHHc-CCCcEEE
Q psy11160 82 GLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAA-------ARMIAEIA-TDNKIVV 153 (598)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~-~~~~ivv 153 (598)
.+..-.+.+....++|+||++-.-|.+ .+.+...++. .+.+.+.+ +...+|.
T Consensus 67 ------------~~~~G~~~~~~~~~~d~vV~Spgi~~~--------~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIa 126 (524)
T 3hn7_A 67 ------------TIEEGYLIAHLQPAPDLVVVGNAMKRG--------MDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIA 126 (524)
T ss_dssp ------------EEEESCCGGGGCSCCSEEEECTTCCTT--------SHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEE
T ss_pred ------------EEECCCCHHHcCCCCCEEEECCCcCCC--------CHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEE
Confidence 122223333333579999988443431 2333222221 12234433 3457888
Q ss_pred EecCCchHHHHHHHH
Q psy11160 154 EKSTVPVRAAESIMN 168 (598)
Q Consensus 154 ~~STv~~~~~~~~~~ 168 (598)
+..|---.||-.+..
T Consensus 127 VTGTnGKTTTt~li~ 141 (524)
T 3hn7_A 127 VAGTHGKTTTTTMLA 141 (524)
T ss_dssp EECSSCHHHHHHHHH
T ss_pred EECCCCHHHHHHHHH
Confidence 888888877766544
No 449
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.17 E-value=0.064 Score=56.10 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=29.9
Q ss_pred CCCC-CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 1 MVQT-ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 1 m~~~-~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
||.+ ..+|+|||.|..|+.+|..|++ .|++|+++|+++
T Consensus 1 ~M~~~~~dVvIVGaG~aGl~~A~~L~~---------------------------~G~~V~viE~~~ 39 (399)
T 2x3n_A 1 GMTDNHIDVLINGCGIGGAMLAYLLGR---------------------------QGHRVVVVEQAR 39 (399)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSC
T ss_pred CCCCCcCCEEEECcCHHHHHHHHHHHh---------------------------CCCcEEEEeCCC
Confidence 4443 4689999999999999999999 778888888764
No 450
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.12 E-value=0.054 Score=58.42 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=29.8
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
|++|+|||+|.-|++.|..|++ +|++|++++.+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~---------------------------~G~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA---------------------------AGIPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH---------------------------TTCCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHH---------------------------CCCcEEEEccCC
Confidence 4689999999999999999999 788888888754
No 451
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=93.04 E-value=0.17 Score=53.07 Aligned_cols=22 Identities=18% Similarity=0.333 Sum_probs=20.0
Q ss_pred CceEEEEC-CChhHHHHHHHHHH
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~ 26 (598)
++||+||| .||+|.-+...|..
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~ 24 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEE 24 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHT
T ss_pred CcEEEEECCCChHHHHHHHHHhc
Confidence 47999999 69999999998887
No 452
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.00 E-value=0.19 Score=53.84 Aligned_cols=114 Identities=16% Similarity=0.165 Sum_probs=66.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCChH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGLD 84 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~~ 84 (598)
.+||.|||+|..|.+.|..|++ .|++|+++|.....- +..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~---------------------------~G~~v~~~D~~~~~~-------------~~~ 44 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLA---------------------------RGVTPRVMDTRMTPP-------------GLD 44 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHT---------------------------TTCCCEEEESSSSCT-------------TGG
T ss_pred CCEEEEEeecHHHHHHHHHHHh---------------------------CCCEEEEEECCCCcc-------------hhH
Confidence 3689999999999999988888 899999999854210 000
Q ss_pred HHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHH-------HHHHHHHHcCCCcEEEEecC
Q psy11160 85 EVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEA-------AARMIAEIATDNKIVVEKST 157 (598)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~ivv~~ST 157 (598)
. +. ...++..-....+.+.++|+||++..-|.+ .+.+...++ -++.+.... +..+|-+..|
T Consensus 45 ~-l~--~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~--------~p~~~~a~~~~~~v~~~~~~~~~~~-~~~vI~VTGT 112 (439)
T 2x5o_A 45 K-LP--EAVERHTGSLNDEWLMAADLIVASPGIALA--------HPSLSAAADAGIEIVGDIELFCREA-QAPIVAITGS 112 (439)
T ss_dssp G-SC--TTSCEEESSCCHHHHHTCSEEEECTTSCTT--------CHHHHHHHHTTCEEECHHHHHHHHC-CSCEEEEECS
T ss_pred H-hh--CCCEEEECCCcHHHhccCCEEEeCCCCCCC--------CHHHHHHHHCCCcEEEHHHHHHHhc-CCCEEEEECC
Confidence 0 00 011222122224567789999988544321 122221110 011223333 4678888888
Q ss_pred CchHHHHHHHHHH
Q psy11160 158 VPVRAAESIMNVL 170 (598)
Q Consensus 158 v~~~~~~~~~~~l 170 (598)
---+||-.+...+
T Consensus 113 nGKTTT~~ml~~i 125 (439)
T 2x5o_A 113 NGKSTVTTLVGEM 125 (439)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8887776655433
No 453
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=92.98 E-value=0.18 Score=52.70 Aligned_cols=36 Identities=33% Similarity=0.387 Sum_probs=32.9
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
.++|+|+|+|.||..+|..+.. .|.+|+++|+++++
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~---------------------------~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAE---------------------------AGAQLLVADTDTER 210 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEECSCHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHH---------------------------CCCEEEEEeCCccH
Confidence 3689999999999999999998 78999999999876
No 454
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.97 E-value=0.34 Score=47.26 Aligned_cols=69 Identities=14% Similarity=0.283 Sum_probs=46.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH-HHHHHH-cCCCCCCCCC
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE-RIRQWN-SNKLPIYEPG 82 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~-~~~~~~-~~~~~~~e~~ 82 (598)
.++|.|||.|.||..-+..|.+ .|.+|++++.+.. .++.+. ++......
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~---------------------------~GA~VtVvap~~~~~l~~l~~~~~i~~i~-- 81 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ---------------------------EGAAITVVAPTVSAEINEWEAKGQLRVKR-- 81 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG---------------------------GCCCEEEECSSCCHHHHHHHHTTSCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHH---------------------------CCCEEEEECCCCCHHHHHHHHcCCcEEEE--
Confidence 3689999999999999999999 7899999986532 244433 22111100
Q ss_pred hHHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 83 LDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
. ... .+.+.++|+||.++..
T Consensus 82 ----------~----~~~-~~dL~~adLVIaAT~d 101 (223)
T 3dfz_A 82 ----------K----KVG-EEDLLNVFFIVVATND 101 (223)
T ss_dssp ----------S----CCC-GGGSSSCSEEEECCCC
T ss_pred ----------C----CCC-HhHhCCCCEEEECCCC
Confidence 0 011 2357899999988543
No 455
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.96 E-value=0.077 Score=55.35 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=29.6
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
...|+|||.|.+|+++|..|++ .|++|+++|+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~---------------------------~G~~V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE---------------------------RGHRVLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEeCCC
Confidence 4689999999999999999999 778888888753
No 456
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=92.92 E-value=0.074 Score=56.70 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
++|+|||.|..|+.+|..|++ .|++|+++|+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~---------------------------~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ---------------------------HDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH---------------------------TTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHH---------------------------CCCeEEEEcCCC
Confidence 579999999999999999999 899999999864
No 457
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.88 E-value=0.095 Score=54.95 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=30.3
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
.++|+|||+|..|+.+|..|++ .|++|+++|+++
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~---------------------------~G~~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQ---------------------------SGIDCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------------------------TTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh---------------------------CCCCEEEEeCCC
Confidence 3689999999999999999999 788888888764
No 458
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=92.86 E-value=0.12 Score=54.11 Aligned_cols=22 Identities=23% Similarity=0.542 Sum_probs=20.3
Q ss_pred CceEEEEC-CChhHHHHHHHHHH
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~ 26 (598)
++||+|+| .|++|..+...|.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~ 31 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLG 31 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHc
Confidence 47999999 89999999999987
No 459
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.84 E-value=0.097 Score=55.43 Aligned_cols=23 Identities=30% Similarity=0.328 Sum_probs=21.0
Q ss_pred CCceEEEECCChhHHHHHHHHHH
Q psy11160 4 TISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~ 26 (598)
+...|+|||.|..|++.|..|++
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~ 27 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLAR 27 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHH
Confidence 34589999999999999999999
No 460
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.82 E-value=0.23 Score=50.87 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=67.4
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcC-CeEEEeCCCCC----hhhhhhhhhcccccccCCCceEecC-Chhh
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEG-AKLKIYDPKVE----PSQIIQDLKELDPELLDHNAVSILD-DPYD 467 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G-~~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 467 (598)
..+|+|+|+ ..-...++..|.+.| .+|.+||+... .++..+.+.. . +. .. ++.+
T Consensus 24 ~m~IgvIG~----------G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~-------~-g~--~~~s~~e 83 (317)
T 4ezb_A 24 MTTIAFIGF----------GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE-------L-GV--EPLDDVA 83 (317)
T ss_dssp CCEEEEECC----------SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH-------T-TC--EEESSGG
T ss_pred CCeEEEECc----------cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH-------C-CC--CCCCHHH
Confidence 368999997 357789999999999 99999998541 0011111110 1 22 46 7889
Q ss_pred hccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCC
Q psy11160 468 TVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 468 al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~ 509 (598)
+++++|+||+++.-+...+. ...+...+++..+|+|...+.
T Consensus 84 ~~~~aDvVi~avp~~~~~~~-~~~i~~~l~~~~ivv~~st~~ 124 (317)
T 4ezb_A 84 GIACADVVLSLVVGAATKAV-AASAAPHLSDEAVFIDLNSVG 124 (317)
T ss_dssp GGGGCSEEEECCCGGGHHHH-HHHHGGGCCTTCEEEECCSCC
T ss_pred HHhcCCEEEEecCCHHHHHH-HHHHHhhcCCCCEEEECCCCC
Confidence 99999999999988765442 356666666677999988764
No 461
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=92.80 E-value=0.14 Score=53.06 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=20.0
Q ss_pred CceEEEECCChhHHHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~ 26 (598)
.+||+|||+|.||..++..|..
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~ 27 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRS 27 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHh
Confidence 4689999999999999999877
No 462
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.78 E-value=0.066 Score=57.14 Aligned_cols=39 Identities=26% Similarity=0.292 Sum_probs=31.5
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE 66 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~ 66 (598)
||....+|+|||.|..|+..|..|++ .|++|+++|+++.
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~---------------------------~G~~V~llEk~~~ 61 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGK---------------------------RGRRVLVIDHARA 61 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHH---------------------------CCCcEEEEeCCCC
Confidence 44445689999999999999999999 8999999998764
No 463
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.76 E-value=1.7 Score=43.30 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=33.2
Q ss_pred eEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 7 HICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 7 ~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
.+.|.| .|.+|..+|..|++ .|++|+++++++++.+.+.
T Consensus 30 ~~lVTGas~GIG~aia~~la~---------------------------~G~~V~~~~r~~~~~~~~~ 69 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAA---------------------------DGVTVGALGRTRTEVEEVA 69 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHH---------------------------TTCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHH
Confidence 455666 48999999999999 8999999999998877654
No 464
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=92.73 E-value=0.11 Score=47.87 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=30.5
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
.+|+|||.|..|..+|..|++ .|.+|+++++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~---------------------------~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR---------------------------AGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHH---------------------------CCCcEEEEeCCC
Confidence 589999999999999999999 789999999875
No 465
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.71 E-value=4.7 Score=39.33 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=32.7
Q ss_pred eEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 7 HICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 7 ~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
++.|.| .|.+|..+|..|++ .|++|++.++++++.+.+.
T Consensus 12 ~vlVTGas~gIG~aia~~l~~---------------------------~G~~V~~~~r~~~~~~~~~ 51 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFAR---------------------------AGANVAVAGRSTADIDACV 51 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH---------------------------CCCEEEEEeCCHHHHHHHH
Confidence 444555 58999999999999 8999999999998877654
No 466
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.65 E-value=0.37 Score=49.32 Aligned_cols=99 Identities=10% Similarity=0.186 Sum_probs=67.0
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcC----CeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhc
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEG----AKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTV 469 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G----~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 469 (598)
..+|+|+|+ ...+..++..|.+.| .+|.+||+....+... .+.. . ++....++.+++
T Consensus 22 ~mkI~iIG~----------G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~-~l~~----~----G~~~~~~~~e~~ 82 (322)
T 2izz_A 22 SMSVGFIGA----------GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVS-ALRK----M----GVKLTPHNKETV 82 (322)
T ss_dssp CCCEEEESC----------SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHH-HHHH----H----TCEEESCHHHHH
T ss_pred CCEEEEECC----------CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHH-HHHH----c----CCEEeCChHHHh
Confidence 458999997 367888999999999 7999999865311111 1110 1 235667888899
Q ss_pred cCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChh
Q psy11160 470 KNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHD 512 (598)
Q Consensus 470 ~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~ 512 (598)
+++|+||+++......+. +..+...+.+..+|+|..+-++.+
T Consensus 83 ~~aDvVilav~~~~~~~v-l~~l~~~l~~~~ivvs~s~gi~~~ 124 (322)
T 2izz_A 83 QHSDVLFLAVKPHIIPFI-LDEIGADIEDRHIVVSCAAGVTIS 124 (322)
T ss_dssp HHCSEEEECSCGGGHHHH-HHHHGGGCCTTCEEEECCTTCCHH
T ss_pred ccCCEEEEEeCHHHHHHH-HHHHHhhcCCCCEEEEeCCCCCHH
Confidence 999999999985444332 234554454456899987765543
No 467
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=92.56 E-value=0.14 Score=54.16 Aligned_cols=28 Identities=18% Similarity=0.418 Sum_probs=22.2
Q ss_pred CceEEEEC-CChhHHHHHHHHHHhCCCCcc
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALKCPNIQV 33 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~~~~~~~ 33 (598)
++||+|+| .||+|.-+...|.. .|.+.+
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~-hp~~el 47 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSK-HPEFEI 47 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-CSSEEE
T ss_pred ccEEEEECCCChHHHHHHHHHHc-CCCceE
Confidence 36899999 59999999998887 344444
No 468
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=92.52 E-value=0.34 Score=51.93 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=70.3
Q ss_pred HHHHhcccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCC
Q psy11160 385 YESLFNTVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDD 464 (598)
Q Consensus 385 i~~~~~~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (598)
.+.....+.+++|+|+|+ ..-...+++.|...|++|.+|||.......... . ++. ..+
T Consensus 202 ~ratg~~L~GktVgIiG~----------G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~-------~----G~~-~~s 259 (436)
T 3h9u_A 202 KRATDVMIAGKTACVCGY----------GDVGKGCAAALRGFGARVVVTEVDPINALQAAM-------E----GYQ-VLL 259 (436)
T ss_dssp HHHHCCCCTTCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------T----TCE-ECC
T ss_pred HHhcCCcccCCEEEEEee----------CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH-------h----CCe-ecC
Confidence 333344578999999997 356788999999999999999995422111110 1 112 347
Q ss_pred hhhhccCCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCC---CChhhhhh
Q psy11160 465 PYDTVKNTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKI---LNHDALLD 516 (598)
Q Consensus 465 ~~~al~~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i---~d~~~~~~ 516 (598)
+.++++.+|++++.+....+ ++- ...+.|++..+|++.-+- +|.+.+..
T Consensus 260 L~eal~~ADVVilt~gt~~i--I~~-e~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 260 VEDVVEEAHIFVTTTGNDDI--ITS-EHFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp HHHHTTTCSEEEECSSCSCS--BCT-TTGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred HHHHHhhCCEEEECCCCcCc--cCH-HHHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 89999999999987654433 222 224467777788887652 45555544
No 469
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.52 E-value=0.29 Score=51.54 Aligned_cols=94 Identities=12% Similarity=0.175 Sum_probs=59.4
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCC----HHHH----HHHHcCCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKS----EERI----RQWNSNKL 76 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~----~~~~----~~~~~~~~ 76 (598)
.||.|+|+|.+|..+|..|.. .|. +|+++|++ .++. +.++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~---------------------------~G~~~I~v~Dr~Gli~~~R~~~~L~~~k---- 241 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLD---------------------------LGVKNVVAVDRKGILNENDPETCLNEYH---- 241 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------------------------HTCCEEEEEETTEECCTTSGGGCSSHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHh---------------------------CCCCeEEEEECCCcccCCCcccccCHHH----
Confidence 589999999999999999998 566 89999997 5442 1111
Q ss_pred CCCCCChHHHHhhhcCCceEEecCHHHHhccCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEec
Q psy11160 77 PIYEPGLDEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKS 156 (598)
Q Consensus 77 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~S 156 (598)
+.+.+.... .....++.++++++|++|-+.. |. -. -+++.+.+.++.+|+..|
T Consensus 242 --------~~~A~~~~~-~~~~~~L~eav~~ADVlIG~Sa-p~-l~----------------t~emVk~Ma~~pIIfalS 294 (388)
T 1vl6_A 242 --------LEIARITNP-ERLSGDLETALEGADFFIGVSR-GN-IL----------------KPEWIKKMSRKPVIFALA 294 (388)
T ss_dssp --------HHHHHTSCT-TCCCSCHHHHHTTCSEEEECSC-SS-CS----------------CHHHHTTSCSSCEEEECC
T ss_pred --------HHHHHhhhc-cCchhhHHHHHccCCEEEEeCC-CC-cc----------------CHHHHHhcCCCCEEEEcC
Confidence 111111110 1124578899999999776653 42 11 123334456677877766
Q ss_pred C
Q psy11160 157 T 157 (598)
Q Consensus 157 T 157 (598)
-
T Consensus 295 N 295 (388)
T 1vl6_A 295 N 295 (388)
T ss_dssp S
T ss_pred C
Confidence 4
No 470
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.48 E-value=0.29 Score=48.48 Aligned_cols=40 Identities=20% Similarity=0.396 Sum_probs=32.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCc-eEEEEeCCHHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNI-QVTVVDKSEERIRQWN 72 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~~~~~~~~~ 72 (598)
.+|.|||+|-+|.++|..|+. .|. +++++|.+.-....++
T Consensus 29 ~~VlvvG~GglG~~va~~La~---------------------------~Gvg~i~lvD~d~v~~sNL~ 69 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAG---------------------------AGVGTLVLADDDDVHLSNLQ 69 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---------------------------TTCSEEEEECCCBCCGGGTT
T ss_pred CcEEEEccCHHHHHHHHHHHH---------------------------cCCCeEEEEeCCCcccccCC
Confidence 689999999999999999999 664 8899988753333333
No 471
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.46 E-value=0.22 Score=49.89 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=63.5
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCCE
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTHA 474 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ada 474 (598)
.+|+|+|+ ..-+..++..|.+.|.+|.+||+.....+ .+.. . ++....++.++++++|+
T Consensus 6 m~i~iiG~----------G~~G~~~a~~l~~~g~~V~~~~~~~~~~~---~~~~----~----g~~~~~~~~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGL----------GIMGKPMSKNLLKAGYSLVVSDRNPEAIA---DVIA----A----GAETASTAKAIAEQCDV 64 (299)
T ss_dssp CEEEEECC----------STTHHHHHHHHHHTTCEEEEECSCHHHHH---HHHH----T----TCEECSSHHHHHHHCSE
T ss_pred ceEEEECc----------hHHHHHHHHHHHhCCCEEEEEeCCHHHHH---HHHH----C----CCeecCCHHHHHhCCCE
Confidence 48999996 35678899999999999999998532211 1110 1 23566788888999999
Q ss_pred EEEEeeccc-hhhccH--HHHHhccCCCcEEEecCCCC
Q psy11160 475 IVVCTEWDE-FVTLDY--KRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 475 lii~t~~~~-f~~ld~--~~l~~~m~~~~iI~D~r~i~ 509 (598)
|++++..+. .+..-. +.+...+.+..+|+|..+..
T Consensus 65 vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 65 IITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp EEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred EEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCC
Confidence 999998654 222110 22334455556899988775
No 472
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.42 E-value=0.24 Score=51.30 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=24.3
Q ss_pred CceEEEEC-CChhHHHHHHHHHHh-CCCCcceecc
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIALK-CPNIQVTVVD 37 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~~-~~~~~~~~~~ 37 (598)
++||+|+| .|++|..+...|... +|++++..++
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 57999999 999999999988872 1444443333
No 473
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=92.42 E-value=0.042 Score=58.92 Aligned_cols=39 Identities=18% Similarity=0.348 Sum_probs=32.6
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE 66 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~ 66 (598)
||.+..+|+|||+|..|+.+|..|++ .|++|+++|+++.
T Consensus 2 mm~~~~dVvIVGaG~aGl~aA~~La~---------------------------~G~~V~vlE~~~~ 40 (453)
T 3atr_A 2 MKELKYDVLIIGGGFAGSSAAYQLSR---------------------------RGLKILLVDSKPW 40 (453)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHSS---------------------------SSCCEEEECSSCG
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHH---------------------------CCCCEEEEECCCC
Confidence 55545689999999999999999998 7888888887643
No 474
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.42 E-value=0.31 Score=53.00 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=69.7
Q ss_pred cCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChh-hhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 392 VSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPS-QIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 392 ~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.++|+|+|+ .+....++..|.+.|.+|.+||...... .+.+. ..+ .++....++.++++
T Consensus 13 ~~~~~IgvIGl----------G~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~-------~~~-~gi~~~~s~~e~v~ 74 (480)
T 2zyd_A 13 MSKQQIGVVGM----------AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAE-------NPG-KKLVPYYTVKEFVE 74 (480)
T ss_dssp --CBSEEEECC----------SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHH-------STT-SCEEECSSHHHHHH
T ss_pred cCCCeEEEEcc----------HHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhh-------CCC-CCeEEeCCHHHHHh
Confidence 35789999998 4678899999999999999999753321 11111 111 14566788888888
Q ss_pred C---CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCCCCC
Q psy11160 471 N---THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRKILN 510 (598)
Q Consensus 471 ~---adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~i~d 510 (598)
+ +|+||+++... ..++ -++.+...+.+..+|+|+.+...
T Consensus 75 ~l~~aDvVil~Vp~~~~v~~-vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 75 SLETPRRILLMVKAGAGTDA-AIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp TBCSSCEEEECSCSSSHHHH-HHHHHGGGCCTTCEEEECSCCCH
T ss_pred CCCCCCEEEEECCCHHHHHH-HHHHHHhhcCCCCEEEECCCCCH
Confidence 7 99999999885 3443 22456666655569999999863
No 475
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=92.40 E-value=0.015 Score=57.43 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=46.5
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
+++|.|.|+ |++|..++..|++ .|++|+++++++.+. +. .+.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~~--~~--------~~~ 44 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGT---------------------------LAHEVRLSDIVDLGA--AE--------AHE 44 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGG---------------------------TEEEEEECCSSCCCC--CC--------TTE
T ss_pred CceEEEECCCCHHHHHHHHHHHh---------------------------CCCEEEEEeCCCccc--cC--------CCc
Confidence 358999998 9999999999999 789999999976421 00 010
Q ss_pred HHHHhhhcCCceEEecCHHHHhccCcEEEEecCC
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQKAQLIFISVNT 117 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~adviii~v~t 117 (598)
......+.-..+..++++++|+||-+...
T Consensus 45 -----~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 45 -----EIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp -----EECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred -----cEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 00001111112345567889999988754
No 476
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.37 E-value=0.074 Score=54.65 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=29.2
Q ss_pred eEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 7 HICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 7 ~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
-|+|||+|..|+.+|..|++ .|++|+++|+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~---------------------------~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK---------------------------YGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH---------------------------TTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHH---------------------------CCCcEEEEeCCC
Confidence 49999999999999999999 899999999754
No 477
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.35 E-value=0.17 Score=55.90 Aligned_cols=107 Identities=14% Similarity=0.083 Sum_probs=61.2
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCCh-hhhccCCC
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDP-YDTVKNTH 473 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~ad 473 (598)
.+|.|+|+ +--+..+++.|.+.|.+|.+-|...... . .+.. --.|+. +-...+ ..-++.||
T Consensus 349 ~~viIiG~----------G~~G~~la~~L~~~g~~v~vid~d~~~~--~-~~~~--~i~gD~---t~~~~L~~agi~~ad 410 (565)
T 4gx0_A 349 ELIFIIGH----------GRIGCAAAAFLDRKPVPFILIDRQESPV--C-NDHV--VVYGDA---TVGQTLRQAGIDRAS 410 (565)
T ss_dssp CCEEEECC----------SHHHHHHHHHHHHTTCCEEEEESSCCSS--C-CSSC--EEESCS---SSSTHHHHHTTTSCS
T ss_pred CCEEEECC----------CHHHHHHHHHHHHCCCCEEEEECChHHH--h-hcCC--EEEeCC---CCHHHHHhcCccccC
Confidence 78999997 3457889999999999999987643211 1 0100 001211 000011 12345799
Q ss_pred EEEEEeeccchhhccHHHHHhccCCC-cEEEecCCCCChhhhhhccce
Q psy11160 474 AIVVCTEWDEFVTLDYKRIYEGMMKP-AYIFDGRKILNHDALLDIGFN 520 (598)
Q Consensus 474 alii~t~~~~f~~ld~~~l~~~m~~~-~iI~D~r~i~d~~~~~~~G~~ 520 (598)
++|++|+.++ .++-...+...+..+ .+|.=.++--..+.++..|..
T Consensus 411 ~vi~~~~~d~-~ni~~~~~ak~l~~~~~iiar~~~~~~~~~l~~~G~d 457 (565)
T 4gx0_A 411 GIIVTTNDDS-TNIFLTLACRHLHSHIRIVARANGEENVDQLYAAGAD 457 (565)
T ss_dssp EEEECCSCHH-HHHHHHHHHHHHCSSSEEEEEESSTTSHHHHHHHTCS
T ss_pred EEEEECCCch-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCC
Confidence 9999999875 222223333333333 566656655556666666663
No 478
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.35 E-value=0.35 Score=52.86 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=69.3
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC--
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN-- 471 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-- 471 (598)
..+|+|+|+ .+....|+..|.+.|++|.+||......+....- . ..+ .++..+.++.+++++
T Consensus 10 ~~~IgvIGl----------G~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~--~---~~~-~gi~~~~s~~e~v~~l~ 73 (497)
T 2p4q_A 10 SADFGLIGL----------AVMGQNLILNAADHGFTVCAYNRTQSKVDHFLAN--E---AKG-KSIIGATSIEDFISKLK 73 (497)
T ss_dssp CCSEEEECC----------SHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHT--T---TTT-SSEECCSSHHHHHHTSC
T ss_pred CCCEEEEee----------HHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcc--c---ccC-CCeEEeCCHHHHHhcCC
Confidence 568999998 3678899999999999999999864322111100 0 000 145667888888877
Q ss_pred -CCEEEEEeecc-chhhccHHHHHhccCCCcEEEecCCCCC
Q psy11160 472 -THAIVVCTEWD-EFVTLDYKRIYEGMMKPAYIFDGRKILN 510 (598)
Q Consensus 472 -adalii~t~~~-~f~~ld~~~l~~~m~~~~iI~D~r~i~d 510 (598)
+|+||+++..+ ..++ -++.+...+.+..+|+|+.+...
T Consensus 74 ~aDvVil~Vp~~~~v~~-vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 74 RPRKVMLLVKAGAPVDA-LINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp SSCEEEECCCSSHHHHH-HHHHHGGGCCTTCEEEECSCCCH
T ss_pred CCCEEEEEcCChHHHHH-HHHHHHHhCCCCCEEEECCCCCh
Confidence 99999999985 3333 22456666655569999998864
No 479
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=92.35 E-value=2.8 Score=41.33 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=34.0
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
+++.|.|+ |.+|..+|..|++ .|++|++.++++++.+.+.
T Consensus 5 k~~lVTGas~GIG~aia~~la~---------------------------~G~~V~~~~r~~~~~~~~~ 45 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGV---------------------------AGAKILLGARRQARIEAIA 45 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHH
Confidence 45666665 7999999999999 8999999999998877654
No 480
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=92.34 E-value=0.24 Score=51.38 Aligned_cols=22 Identities=18% Similarity=0.383 Sum_probs=19.6
Q ss_pred CceEEEEC-CChhHHHHHHHHHH
Q psy11160 5 ISHICCIG-AGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG-~G~vG~~~a~~la~ 26 (598)
+|||+|+| .|++|..+...|.+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~ 28 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDE 28 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHh
Confidence 47999999 79999999998875
No 481
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=92.33 E-value=0.29 Score=51.76 Aligned_cols=35 Identities=11% Similarity=0.238 Sum_probs=31.6
Q ss_pred CceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHH
Q psy11160 5 ISHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEE 66 (598)
Q Consensus 5 ~~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~ 66 (598)
+++|.|.|+ |++|..++..|+. .|++|++++++++
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~---------------------------~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQG---------------------------YSHRIYCFIRADN 104 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTT---------------------------TEEEEEEEEECSS
T ss_pred CCEEEEecCCcHHHHHHHHHHHc---------------------------CCCEEEEEECCCC
Confidence 468999996 9999999999987 8999999999877
No 482
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.31 E-value=0.17 Score=51.40 Aligned_cols=95 Identities=9% Similarity=0.135 Sum_probs=65.1
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNT 472 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 472 (598)
...+|+|+|+ ......+++.|.+.|++|.+||+.....+. +.. . +.....++.++++++
T Consensus 8 ~~~~IgiIG~----------G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~---~~~----~----g~~~~~~~~e~~~~a 66 (306)
T 3l6d_A 8 FEFDVSVIGL----------GAMGTIMAQVLLKQGKRVAIWNRSPGKAAA---LVA----A----GAHLCESVKAALSAS 66 (306)
T ss_dssp CSCSEEEECC----------SHHHHHHHHHHHHTTCCEEEECSSHHHHHH---HHH----H----TCEECSSHHHHHHHS
T ss_pred CCCeEEEECC----------CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHH----C----CCeecCCHHHHHhcC
Confidence 4578999997 357788999999999999999985432111 110 1 235678899999999
Q ss_pred CEEEEEeeccc-hhhc-cHHHHHhccCCCcEEEecCCCC
Q psy11160 473 HAIVVCTEWDE-FVTL-DYKRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 473 dalii~t~~~~-f~~l-d~~~l~~~m~~~~iI~D~r~i~ 509 (598)
|+||+++..+. .++. ..+.+.. +.+..+|+|...+.
T Consensus 67 DvVi~~vp~~~~~~~v~~~~~l~~-~~~g~ivid~st~~ 104 (306)
T 3l6d_A 67 PATIFVLLDNHATHEVLGMPGVAR-ALAHRTIVDYTTNA 104 (306)
T ss_dssp SEEEECCSSHHHHHHHHTSTTHHH-HTTTCEEEECCCCC
T ss_pred CEEEEEeCCHHHHHHHhcccchhh-ccCCCEEEECCCCC
Confidence 99999998664 3321 1002322 34556899998764
No 483
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=92.31 E-value=3.9 Score=39.88 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=33.9
Q ss_pred ceEEEEC-CChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 6 SHICCIG-AGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 6 ~~I~viG-~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
++|.|.| .|.+|..+|..|++ .|++|+++++++++.+.+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~---------------------------~G~~V~~~~r~~~~~~~~~ 70 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGS---------------------------LGARVVLTARDVEKLRAVE 70 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHH---------------------------CCCEEEEEECCHHHHHHHH
Confidence 4566666 59999999999999 8999999999998877654
No 484
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.31 E-value=0.1 Score=55.18 Aligned_cols=95 Identities=11% Similarity=0.170 Sum_probs=65.8
Q ss_pred ccCCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc
Q psy11160 391 TVSDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK 470 (598)
Q Consensus 391 ~~~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 470 (598)
.+.+++|+|+|+ ..-+-.+++.|...|.+|.+|||..... . .+ .. ..++.++++
T Consensus 113 ~l~g~tvGIIGl----------G~IG~~vA~~l~~~G~~V~~~d~~~~~~---~--------~g----~~-~~~l~ell~ 166 (380)
T 2o4c_A 113 DLAERTYGVVGA----------GQVGGRLVEVLRGLGWKVLVCDPPRQAR---E--------PD----GE-FVSLERLLA 166 (380)
T ss_dssp CGGGCEEEEECC----------SHHHHHHHHHHHHTTCEEEEECHHHHHH---S--------TT----SC-CCCHHHHHH
T ss_pred ccCCCEEEEEeC----------CHHHHHHHHHHHHCCCEEEEEcCChhhh---c--------cC----cc-cCCHHHHHH
Confidence 357899999997 3577889999999999999999853211 0 11 11 357888999
Q ss_pred CCCEEEEEeeccc-----hhh-ccHHHHHhccCCCcEEEecCC--CCChh
Q psy11160 471 NTHAIVVCTEWDE-----FVT-LDYKRIYEGMMKPAYIFDGRK--ILNHD 512 (598)
Q Consensus 471 ~adalii~t~~~~-----f~~-ld~~~l~~~m~~~~iI~D~r~--i~d~~ 512 (598)
.+|+|++++.... -++ ++ ....+.|++..+++|..+ +.|.+
T Consensus 167 ~aDvV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~sRG~vvd~~ 215 (380)
T 2o4c_A 167 EADVISLHTPLNRDGEHPTRHLLD-EPRLAALRPGTWLVNASRGAVVDNQ 215 (380)
T ss_dssp HCSEEEECCCCCSSSSSCCTTSBC-HHHHHTSCTTEEEEECSCGGGBCHH
T ss_pred hCCEEEEeccCccccccchhhhcC-HHHHhhCCCCcEEEECCCCcccCHH
Confidence 9999999876543 222 34 344556777678888765 34543
No 485
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=92.30 E-value=0.074 Score=56.24 Aligned_cols=82 Identities=21% Similarity=0.247 Sum_probs=53.7
Q ss_pred ceEEEECCChhHHHH-HHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc-CCCCCCCCCh
Q psy11160 6 SHICCIGAGYVGGPT-CSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS-NKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~viG~G~vG~~~-a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~-~~~~~~e~~~ 83 (598)
||+..+|+|.+|... +..|.+ .|++|+..|+++..++.+|+ |...+...|.
T Consensus 1 mkavhfGaGniGRGfig~~l~~---------------------------~g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~ 53 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLAD---------------------------AGIQLTFADVNQVVLDALNARHSYQVHVVGE 53 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHH---------------------------TTCEEEEEESCHHHHHHHHHHSEEEEEEESS
T ss_pred CcEEEECCCccchhhHHHHHHH---------------------------cCCeEEEEeCCHHHHHHHhcCCCEEEEEccC
Confidence 689999999999555 555666 89999999999999999995 4333332232
Q ss_pred HHHHhhhcCCceEEe-c---CHHHHhccCcEEEEecC
Q psy11160 84 DEVVKKTRDVNLFFS-T---DIKSAIQKAQLIFISVN 116 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~-~---~~~~~~~~adviii~v~ 116 (598)
++.... + .++++. + +.-+.+.++|+|..+++
T Consensus 54 ~~~~~~-v-~~v~ai~s~~~~~~~~i~~adlitT~vG 88 (382)
T 3h2z_A 54 TEQVDT-V-SGVNAVSSIGDDVVDLIAQVDLVTTAVG 88 (382)
T ss_dssp SEEEEE-E-ESCEEEETTSSHHHHHHTTCSEEEECCC
T ss_pred CcceEE-E-EEEEEEeCcHHHHHHHHcCCCEEEECCC
Confidence 211111 1 123331 1 23446789999888874
No 486
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.22 E-value=0.38 Score=47.43 Aligned_cols=102 Identities=17% Similarity=0.250 Sum_probs=68.6
Q ss_pred CCCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCe-EEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccC
Q psy11160 393 SDKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAK-LKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKN 471 (598)
Q Consensus 393 ~~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 471 (598)
.+.+|+|+|.. .-+..++..|.+.|.+ |.+||+.... ... +.. .. ++....++.+++++
T Consensus 9 ~~m~i~iiG~G----------~mG~~~a~~l~~~g~~~v~~~~~~~~~--~~~-~~~----~~---g~~~~~~~~~~~~~ 68 (266)
T 3d1l_A 9 EDTPIVLIGAG----------NLATNLAKALYRKGFRIVQVYSRTEES--ARE-LAQ----KV---EAEYTTDLAEVNPY 68 (266)
T ss_dssp GGCCEEEECCS----------HHHHHHHHHHHHHTCCEEEEECSSHHH--HHH-HHH----HT---TCEEESCGGGSCSC
T ss_pred CCCeEEEEcCC----------HHHHHHHHHHHHCCCeEEEEEeCCHHH--HHH-HHH----Hc---CCceeCCHHHHhcC
Confidence 34689999963 4667889999999999 8999985322 111 100 00 23456788888899
Q ss_pred CCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCChhhhh
Q psy11160 472 THAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNHDALL 515 (598)
Q Consensus 472 adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~~~~~ 515 (598)
+|++|+++......++ +..+...+.+..+|+|..+.+..+.+.
T Consensus 69 ~Dvvi~av~~~~~~~v-~~~l~~~~~~~~ivv~~s~~~~~~~l~ 111 (266)
T 3d1l_A 69 AKLYIVSLKDSAFAEL-LQGIVEGKREEALMVHTAGSIPMNVWE 111 (266)
T ss_dssp CSEEEECCCHHHHHHH-HHHHHTTCCTTCEEEECCTTSCGGGST
T ss_pred CCEEEEecCHHHHHHH-HHHHHhhcCCCcEEEECCCCCchHHHH
Confidence 9999999988754332 234554454566999998877655443
No 487
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.16 E-value=0.12 Score=54.43 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=29.1
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCC
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKS 64 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 64 (598)
|+|+|||.|..|++.|..|++ .|++|++++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~---------------------------~G~~V~vlE~~ 32 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLAR---------------------------NGHEIIVLEKS 32 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHH---------------------------TTCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHH---------------------------CCCeEEEEeCC
Confidence 589999999999999999999 78888888875
No 488
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=92.07 E-value=0.11 Score=56.73 Aligned_cols=38 Identities=26% Similarity=0.371 Sum_probs=32.5
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
|.+...+|.|||.|..|+.+|..|++ .|++|+++|+++
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~---------------------------~G~~v~viEr~~ 38 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLAR---------------------------QGVRVLVVERRP 38 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHT---------------------------TTCCEEEECSSS
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHH---------------------------CCCCEEEEeCCC
Confidence 55556789999999999999999999 788888888764
No 489
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.05 E-value=0.092 Score=52.90 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=31.6
Q ss_pred CCceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 4 TISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 4 ~~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
+.++|+|||.|..|+..|..|++ .|++|+++|+.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~---------------------------~g~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLAR---------------------------AEIKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH---------------------------TTCCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH---------------------------CCCCEEEEecCC
Confidence 35689999999999999999999 899999999854
No 490
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=92.00 E-value=0.038 Score=53.60 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=31.1
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEER 67 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~ 67 (598)
++|.|.|+ |.+|..++..|++ .|++|+++++++++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~---------------------------~g~~V~~~~r~~~~ 37 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLAR---------------------------AGHTVIGIDRGQAD 37 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESSSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHh---------------------------CCCEEEEEeCChhH
Confidence 47889987 9999999999999 89999999998654
No 491
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=91.96 E-value=0.13 Score=54.03 Aligned_cols=25 Identities=24% Similarity=0.191 Sum_probs=20.6
Q ss_pred CCCCCceEEEECCChhHHHHHHHHHH
Q psy11160 1 MVQTISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 1 m~~~~~~I~viG~G~vG~~~a~~la~ 26 (598)
||+ ..+|+|||.|..|+.+|..|++
T Consensus 1 M~~-~~dVvIVGaG~aGl~~A~~L~~ 25 (410)
T 3c96_A 1 MSE-PIDILIAGAGIGGLSCALALHQ 25 (410)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHH
T ss_pred CCC-CCeEEEECCCHHHHHHHHHHHh
Confidence 554 3689999999999999999999
No 492
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=91.94 E-value=0.15 Score=53.42 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=30.0
Q ss_pred ceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCH
Q psy11160 6 SHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSE 65 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~ 65 (598)
.+|+|||+|..|+.+|..|++ .|++|+++|+++
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~---------------------------~G~~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ---------------------------NGIDVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT---------------------------TTCEEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH---------------------------CCCCEEEEeCCC
Confidence 589999999999999999999 788999998864
No 493
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.92 E-value=0.13 Score=53.08 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=20.5
Q ss_pred CceEEEECCChhHHHHHHHHHH
Q psy11160 5 ISHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~ 26 (598)
..+|+|||.|..|+++|..|++
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~ 24 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK 24 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh
Confidence 3589999999999999999999
No 494
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.90 E-value=0.33 Score=48.68 Aligned_cols=95 Identities=12% Similarity=0.116 Sum_probs=63.9
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhccCCC
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVKNTH 473 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ad 473 (598)
..+|+|+|+ ..-+..++..|.+.|.+|.+||+.... .. .+. ..++....++.++++++|
T Consensus 4 ~~~i~iiG~----------G~~G~~~a~~l~~~g~~V~~~~~~~~~--~~-~~~--------~~g~~~~~~~~~~~~~~D 62 (301)
T 3cky_A 4 SIKIGFIGL----------GAMGKPMAINLLKEGVTVYAFDLMEAN--VA-AVV--------AQGAQACENNQKVAAASD 62 (301)
T ss_dssp CCEEEEECC----------CTTHHHHHHHHHHTTCEEEEECSSHHH--HH-HHH--------TTTCEECSSHHHHHHHCS
T ss_pred CCEEEEECc----------cHHHHHHHHHHHHCCCeEEEEeCCHHH--HH-HHH--------HCCCeecCCHHHHHhCCC
Confidence 358999997 356788999999999999999985321 11 111 013456678888899999
Q ss_pred EEEEEeeccc-hhhccH--HHHHhccCCCcEEEecCCCC
Q psy11160 474 AIVVCTEWDE-FVTLDY--KRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 474 alii~t~~~~-f~~ld~--~~l~~~m~~~~iI~D~r~i~ 509 (598)
+|++++..+. .+..-. +.+...+.+..+|+|..+..
T Consensus 63 ~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 63 IIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp EEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred EEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 9999996544 222111 13334455556899988776
No 495
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=91.88 E-value=0.34 Score=49.52 Aligned_cols=92 Identities=17% Similarity=0.112 Sum_probs=60.1
Q ss_pred ceEEEE-CC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHcCCCCCCCCCh
Q psy11160 6 SHICCI-GA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNSNKLPIYEPGL 83 (598)
Q Consensus 6 ~~I~vi-G~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~~~~~~~e~~~ 83 (598)
.+|+|| |+ |.+|...+..|.+ .|++ .++++|+.+. +. .+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~---------------------------~G~~-~v~~VnP~~~-----g~-~i----- 54 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALE---------------------------YGTN-LVGGTTPGKG-----GK-TH----- 54 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH---------------------------HTCE-EEEEECTTCT-----TC-EE-----
T ss_pred CcEEEEECCCCCHHHHHHHHHHH---------------------------CCCc-EEEEeCCCcC-----cc-eE-----
Confidence 467888 99 9999999999988 6888 5567666431 10 00
Q ss_pred HHHHhhhcCCceEEecCHHHHhc--cCcEEEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCcEEEEecCCchH
Q psy11160 84 DEVVKKTRDVNLFFSTDIKSAIQ--KAQLIFISVNTPTKTFGNGKGRAADLKYVEAAARMIAEIATDNKIVVEKSTVPVR 161 (598)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~adviii~v~tp~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivv~~STv~~~ 161 (598)
.++....+++++.+ .+|++++++|.+ .+.+++++..+.- -..+|+..+-++..
T Consensus 55 ---------~G~~vy~sl~el~~~~~vD~avI~vP~~---------------~~~~~~~e~i~~G-i~~iv~~t~G~~~~ 109 (305)
T 2fp4_A 55 ---------LGLPVFNTVKEAKEQTGATASVIYVPPP---------------FAAAAINEAIDAE-VPLVVCITEGIPQQ 109 (305)
T ss_dssp ---------TTEEEESSHHHHHHHHCCCEEEECCCHH---------------HHHHHHHHHHHTT-CSEEEECCCCCCHH
T ss_pred ---------CCeeeechHHHhhhcCCCCEEEEecCHH---------------HHHHHHHHHHHCC-CCEEEEECCCCChH
Confidence 24667778888877 899999998654 3455555555432 23445554444443
No 496
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.88 E-value=0.099 Score=53.59 Aligned_cols=21 Identities=33% Similarity=0.442 Sum_probs=20.1
Q ss_pred ceEEEECCChhHHHHHHHHHH
Q psy11160 6 SHICCIGAGYVGGPTCSVIAL 26 (598)
Q Consensus 6 ~~I~viG~G~vG~~~a~~la~ 26 (598)
|.|+|||.|.+|+++|..|++
T Consensus 1 mdVvIIGgGi~Gls~A~~La~ 21 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHE 21 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHH
Confidence 589999999999999999999
No 497
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.87 E-value=0.52 Score=51.33 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=74.9
Q ss_pred CCeEEEEeccccCCCCcccCChHHHHHHHHHHcCCeEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc---
Q psy11160 394 DKHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGAKLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK--- 470 (598)
Q Consensus 394 ~~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~--- 470 (598)
..+|+|+|+. .....++..|.+.|++|.+||+.....+..... . ..+. .+....++.++++
T Consensus 4 ~~kIgiIGlG----------~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~---g--~~g~-~i~~~~s~~e~v~~l~ 67 (484)
T 4gwg_A 4 QADIALIGLA----------VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN---E--AKGT-KVVGAQSLKEMVSKLK 67 (484)
T ss_dssp CBSEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT---T--TTTS-SCEECSSHHHHHHTBC
T ss_pred CCEEEEEChh----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc---c--cCCC-ceeccCCHHHHHhhcc
Confidence 4689999983 678899999999999999999865322111100 0 0011 2344678888776
Q ss_pred CCCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCCCh------hhhhhccceeee
Q psy11160 471 NTHAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKILNH------DALLDIGFNVHT 523 (598)
Q Consensus 471 ~adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~d~------~~~~~~G~~y~~ 523 (598)
++|+|++++.....-+--++.+...+.+..+|+|+.+.... +.+.+.|+.|..
T Consensus 68 ~aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd 126 (484)
T 4gwg_A 68 KPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVG 126 (484)
T ss_dssp SSCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcccccc
Confidence 59999999998642221235667777777799999998732 233445665533
No 498
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.78 E-value=1.3 Score=45.35 Aligned_cols=43 Identities=21% Similarity=0.260 Sum_probs=35.0
Q ss_pred CceEEEECCChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHHc
Q psy11160 5 ISHICCIGAGYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWNS 73 (598)
Q Consensus 5 ~~~I~viG~G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~~ 73 (598)
..+|.|+|+|.+|+..+..+.. . .|.+|+++|+++++.+.+++
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~-------------------------~-g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRA-------------------------V-SAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-------------------------H-CCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-------------------------c-CCCEEEEEcCCHHHHHHHHH
Confidence 4689999999999887665555 1 27899999999999998775
No 499
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.76 E-value=0.43 Score=47.40 Aligned_cols=95 Identities=15% Similarity=0.083 Sum_probs=63.3
Q ss_pred CeEEEEeccccCCCCcccCChHHHHHHHHHHcCC--eEEEeCCCCChhhhhhhhhcccccccCCCceEecCChhhhcc-C
Q psy11160 395 KHIAILGFAFKKNTGDTRESPAIHVCRTLLYEGA--KLKIYDPKVEPSQIIQDLKELDPELLDHNAVSILDDPYDTVK-N 471 (598)
Q Consensus 395 ~~V~ilGlafK~~t~D~R~Sp~l~li~~L~~~G~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~-~ 471 (598)
++|+|+|+ ..-+..++..|.+.|. +|.+||+.....+.... .|-. .....++.++++ +
T Consensus 2 ~~I~iIG~----------G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-------~g~~--~~~~~~~~~~~~~~ 62 (281)
T 2g5c_A 2 QNVLIVGV----------GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-------LGII--DEGTTSIAKVEDFS 62 (281)
T ss_dssp CEEEEESC----------SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-------TTSC--SEEESCGGGGGGTC
T ss_pred cEEEEEec----------CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH-------CCCc--ccccCCHHHHhcCC
Confidence 47999997 3567889999999998 99999986432211111 1111 023457778889 9
Q ss_pred CCEEEEEeeccchhhccHHHHHhccCCCcEEEecCCCC
Q psy11160 472 THAIVVCTEWDEFVTLDYKRIYEGMMKPAYIFDGRKIL 509 (598)
Q Consensus 472 adalii~t~~~~f~~ld~~~l~~~m~~~~iI~D~r~i~ 509 (598)
+|+|++++......++ +..+...+.+..+|+|..+..
T Consensus 63 aDvVilavp~~~~~~v-~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEEECSCHHHHHHH-HHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEEEcCCHHHHHHH-HHHHHhhCCCCcEEEECCCCc
Confidence 9999999987765432 234555565566888877653
No 500
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.71 E-value=4.9 Score=38.66 Aligned_cols=40 Identities=20% Similarity=0.184 Sum_probs=34.6
Q ss_pred ceEEEECC-ChhHHHHHHHHHHhCCCCcceeccccccCCCcccccccCCCCceEEEEeCCHHHHHHHH
Q psy11160 6 SHICCIGA-GYVGGPTCSVIALKCPNIQVTVVDKRYVGGPTCSVIALKCPNIQVTVVDKSEERIRQWN 72 (598)
Q Consensus 6 ~~I~viG~-G~vG~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~d~~~~~~~~~~ 72 (598)
+++.|.|+ |.+|..+|..|++ .|++|+++++++++.+.+.
T Consensus 10 k~vlITGas~giG~~~a~~l~~---------------------------~G~~V~~~~r~~~~~~~~~ 50 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAR---------------------------EGAAVVVADINAEAAEAVA 50 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---------------------------TTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHH---------------------------CCCEEEEEcCCHHHHHHHH
Confidence 45667776 8999999999999 8999999999998887655
Done!