RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11171
(372 letters)
>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 570
Score = 266 bits (680), Expect = 7e-85
Identities = 121/317 (38%), Positives = 163/317 (51%), Gaps = 29/317 (9%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKSQPARAI-FDKSKGWTKGLKYYGYEKPPARV 68
CNN ++ AS+ F GWT G+K G+ AR
Sbjct: 14 CNNRRSPTLGASN---------RAFVRW-LPAEYEDGFSLPYGWTPGVKRNGFPVALARA 63
Query: 69 VSNELI--STESITPDPVITHMVMQWGQFLDHDLDHAIPATSLESWEGIDCKKSCAFSPP 126
VSNE++ T+ +TPD + M MQWGQ LDHDLD ++C+ SC PP
Sbjct: 64 VSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFT-------PEPAVNCETSCVQQPP 116
Query: 127 CFPMEVPHDDPRVKKR-RCIDFIRSSAICGSGMTSMFWDTVQPREQINQLTAYIDGSQVY 185
CFP+++P +DPR+K + CI F RS C + R QIN LT+++D S VY
Sbjct: 117 CFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNIT-------IRNQINALTSFVDASMVY 169
Query: 186 GFTEERSRVLRDIRNDNGFLR-QGILSAANKPYLPIAGATEVDCRRDPTESNIGCLLAGD 244
G E +R LR++ N G L + LP + C + I C LAGD
Sbjct: 170 GSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGD 229
Query: 245 IRANEQVGLLAMHTLWLREHNRMAKDLRDINPHWDGETLFHETRKIVGAMMQHITYTQWL 304
R++E L +MHTL LREHNR+A +L+ +NP WDGE L+ E RKIVGAM+Q ITY +L
Sbjct: 230 TRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYL 289
Query: 305 PHILGPDGMVKINIEWK 321
P +LGP M K ++
Sbjct: 290 PLVLGPTAMRKYLPTYR 306
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 511
Score = 183 bits (467), Expect = 5e-54
Identities = 45/255 (17%), Positives = 78/255 (30%), Gaps = 65/255 (25%)
Query: 64 PPARVVSNELISTESITPDPV-ITHMVMQWGQFLDHDLDHAIPATSLESWEGIDCKKSCA 122
P ++ V +++ PDP M + Q
Sbjct: 100 PDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQH----FTA-------------------- 135
Query: 123 FSPPCFPMEVPHDDPRVKKRRCIDFIRSSAICGSGMTSMFWDTVQPREQINQLTAYIDGS 182
F ++ D + L +D +
Sbjct: 136 -----------------------QFFKT-------------DHKRGPGFTRGLGHGVDLN 159
Query: 183 QVYGFTEERSRVLRDIRNDNGFLRQGILSAANKPYLPIAGATEVDCRRDPTESNIGCLLA 242
+YG T +R LR +G L+ ++ + Y P T+V+ P
Sbjct: 160 HIYGETLDRQHKLRL--FKDGKLKYQVIG--GEVYPPTVKDTQVEMIYPPHIPENLQFAV 215
Query: 243 GDIRANEQVGLLAMHTLWLREHNRMAKDLRDINPHWDGETLFHETRKIVGAMMQHITYTQ 302
G GL+ T+WLREH R+ L+ +P W E LF ++ I+ I
Sbjct: 216 GQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIVIED 275
Query: 303 WLPHILGPDGMVKIN 317
++ H+ G +K +
Sbjct: 276 YVQHLSGYHFKLKFD 290
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
aries) [TaxId: 9940]}
Length = 511
Score = 182 bits (464), Expect = 1e-53
Identities = 48/267 (17%), Positives = 74/267 (27%), Gaps = 65/267 (24%)
Query: 59 YGYEKPPARVVSNELISTESITPDPV-ITHMVMQWGQFLDHDLDHAIPATSLESWEGIDC 117
+ P A +S + PDP M + Q H
Sbjct: 94 GKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQH----FTH--------------- 134
Query: 118 KKSCAFSPPCFPMEVPHDDPRVKKRRCIDFIRSSAICGSGMTSMFWDTVQPREQINQLTA 177
F ++ L
Sbjct: 135 ----------------------------QFFKT-------------SGKMGPGFTKALGH 153
Query: 178 YIDGSQVYGFTEERSRVLRDIRNDNGFLRQGILSAANKPYLPIAGATEVDCRRDPTESNI 237
+D +YG ER LR +G L+ +L+ + Y P V
Sbjct: 154 GVDLGHIYGDNLERQYQLRL--FKDGKLKYQMLN--GEVYPPSVEEAPVLMHYPRGIPPQ 209
Query: 238 GCLLAGDIRANEQVGLLAMHTLWLREHNRMAKDLRDINPHWDGETLFHETRKIVGAMMQH 297
+ G GL+ T+WLREHNR+ L+ +P W E LF R I+
Sbjct: 210 SQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIK 269
Query: 298 ITYTQWLPHILGPDGMVKINIEWKFIY 324
I +++ + G +K + E F
Sbjct: 270 IVIEEYVQQLSGYFLQLKFDPELLFGA 296
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 35.7 bits (81), Expect = 0.001
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 8 SGCNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
L + S+E SD G Y C + SQP
Sbjct: 51 HWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVW 86
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 35.1 bits (80), Expect = 0.002
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKSQ 40
+ L+I ++ D+G Y C A + G+ +
Sbjct: 53 DSGLVIKGVKNGDKGYYGCRATNEHGDKYFE 83
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 34.5 bits (78), Expect = 0.003
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
+ ++ + ++A D G Y+C+A + G V S+ A
Sbjct: 61 GDLVISNPVKAKDAGSYQCVATNARGTVVSREAS 94
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 33.6 bits (76), Expect = 0.007
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 7 GSGCNNLMIHSMEASDEGVYECMAKSPMGEVK 38
G L+I +++ D Y C + EV+
Sbjct: 63 DQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQ 94
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 33.1 bits (74), Expect = 0.010
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
+L+ +ASDEG Y+C A++P G S+
Sbjct: 57 EGSLVFLRPQASDEGHYQCFAETPAGVASSRVIS 90
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 33.1 bits (74), Expect = 0.012
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 9 GCNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
+ + + D G Y CM ++ G S A
Sbjct: 58 FIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAE 92
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 32.6 bits (73), Expect = 0.020
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 8 SGCNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
L I ++ D G Y C+A + +G
Sbjct: 71 KEIEVLYIRNVTFEDAGEYTCLAGNSIGISFH 102
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 32.1 bits (72), Expect = 0.021
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 8 SGCNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
+ +L++ S+ SD+G Y C+ ++ G +
Sbjct: 59 NQHWSLIMESVVPSDKGNYTCVVENEYGSINH 90
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 31.7 bits (71), Expect = 0.029
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKS 39
L I + G Y + ++ +G ++
Sbjct: 58 LTILAARQEHCGCYTLLVENKLGSRQA 84
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 31.8 bits (71), Expect = 0.030
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKS 39
L I +++ +DE Y C+A++ GE +
Sbjct: 65 LTIRNVDKNDEAEYVCIAENKAGEQDA 91
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 32.0 bits (71), Expect = 0.048
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKS 39
+ E DEGVY K+P+GE +
Sbjct: 96 FTVEGAEKEDEGVYTVTVKNPVGEDQV 122
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 31.0 bits (69), Expect = 0.052
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 7 GSGCNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
G +L I + D+ Y C A + +GE
Sbjct: 61 EEGNCSLTISEVCGDDDAKYTCKAVNSLGEATC 93
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 30.9 bits (69), Expect = 0.057
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKSQ 40
L I +++ DEG YEC A++ G Q
Sbjct: 54 EPLLHIQNVDFEDEGTYECEAENIKGRDTYQ 84
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 30.6 bits (68), Expect = 0.065
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
L + D G+Y+C+A++ G V +
Sbjct: 52 GGELRFSKLVLEDSGMYQCVAENKHGTVYA 81
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 30.2 bits (67), Expect = 0.089
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
+ I S++ASDEG Y + ++ G+ ++
Sbjct: 54 KSTFEISSVQASDEGNYSVVVENSEGKQEA 83
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 30.3 bits (67), Expect = 0.14
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 13 LMIHSMEASDEGVYECMAKSPMG 35
++IH+++ SD G + C K+P
Sbjct: 83 IVIHNLDYSDNGTFTCDVKNPPD 105
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 29.5 bits (65), Expect = 0.17
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKS 39
L I+ ++ D+G Y AK+ G +
Sbjct: 59 LTINRVKGDDKGEYTVRAKNSYGTKEE 85
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 29.6 bits (65), Expect = 0.22
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 9 GCNNLMIHSMEASDEGVYECMAKSPMGEVKSQPA 42
+L+ + A D G Y C A++ G A
Sbjct: 65 KSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEA 98
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 29.4 bits (65), Expect = 0.26
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 13 LMIHSMEASDEGVYEC--MAKSPMGEVKSQ 40
L +H+++ D+G+Y+C K P G ++
Sbjct: 71 LRLHNLQIKDKGLYQCIIHHKKPTGMIRIH 100
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 28.0 bits (61), Expect = 0.54
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVK 38
L I+++ +SDE YE + + +K
Sbjct: 62 LTIYNLTSSDEDEYEMESPNITDTMK 87
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 28.1 bits (61), Expect = 0.71
Identities = 4/28 (14%), Positives = 7/28 (25%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKSQ 40
+ I + + G Y C
Sbjct: 70 MQIIKAKDNFAGNYRCEVTYKDKFDSCS 97
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 27.8 bits (61), Expect = 0.72
Identities = 6/30 (20%), Positives = 9/30 (30%)
Query: 9 GCNNLMIHSMEASDEGVYECMAKSPMGEVK 38
+ L+I +D Y M K
Sbjct: 55 KKHILIIEGATKADAAEYSVMTTGGQSSAK 84
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 27.6 bits (60), Expect = 0.76
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGE 36
N L I ++ +DEG Y C +
Sbjct: 55 NNYLQIRGIKKTDEGTYRCEGRILARG 81
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 28.1 bits (61), Expect = 0.76
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1 MAHPPEGSGCNNLMIHSMEASDEGVYECMAKSPMGE 36
+ G G L I ++ SDEG Y C + +
Sbjct: 71 LLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQ 106
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 28.1 bits (61), Expect = 0.81
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKS 39
L I + + G Y C + S
Sbjct: 74 LHITDAQPAFTGGYRCEVSTKDKFDCS 100
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 27.6 bits (60), Expect = 0.99
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGEVKS 39
L ++ + G Y +A +P G+ +
Sbjct: 65 LRLNQPTHVNNGNYTLLAANPFGQASA 91
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 27.2 bits (59), Expect = 1.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGE 36
++I ++ SDEG YEC+ +
Sbjct: 67 IVILALRPSDEGTYECVVLKYEKD 90
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 26.8 bits (58), Expect = 1.8
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 9 GCNNLMIHSMEASDEGVYECMA 30
L++ S++ D G Y C
Sbjct: 58 MGRRLLLRSVQLHDSGNYSCYR 79
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 26.6 bits (58), Expect = 1.8
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 13 LMIHSMEASDEGVYECMAKSPMGE 36
L I ++ D G Y S G
Sbjct: 62 LKIKNLTRDDSGTYNVTVYSTNGT 85
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 26.4 bits (57), Expect = 2.1
Identities = 5/25 (20%), Positives = 7/25 (28%)
Query: 16 HSMEASDEGVYECMAKSPMGEVKSQ 40
+ D A + GE S
Sbjct: 66 RDVTGEDSASIMVKAINIAGETSSH 90
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 26.0 bits (56), Expect = 3.1
Identities = 8/43 (18%), Positives = 9/43 (20%)
Query: 1 MAHPPEGSGCNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
N I S G Y C S+P
Sbjct: 39 GKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVT 81
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 25.7 bits (55), Expect = 3.3
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
L I +++ SD G Y C + +
Sbjct: 53 NGILTIRNVQPSDAGTYVCTGSNMFAMDQG 82
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 25.7 bits (55), Expect = 3.4
Identities = 6/41 (14%), Positives = 15/41 (36%)
Query: 3 HPPEGSGCNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
G + +++ + ++ C A + G S+ A
Sbjct: 41 TKIGGPAPSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTAT 81
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 25.6 bits (55), Expect = 3.9
Identities = 5/23 (21%), Positives = 9/23 (39%)
Query: 10 CNNLMIHSMEASDEGVYECMAKS 32
L I +D+ Y+C+
Sbjct: 61 KRTLTISQCSLADDAAYQCVVGG 83
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 25.4 bits (54), Expect = 5.1
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 10 CNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
+N+ I + D G Y C K + +S+P
Sbjct: 48 NHNISITNATVEDSGTYYCTGKVWQLDYESEPLN 81
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 25.7 bits (55), Expect = 5.3
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 13 LMIHSMEASDEGVYECMAKSPMG 35
+ + +++ SD G Y+C K G
Sbjct: 90 INVTNLQLSDIGTYQCKVKKAPG 112
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 25.2 bits (54), Expect = 5.7
Identities = 1/39 (2%), Positives = 6/39 (15%)
Query: 3 HPPEGSGCNNLMIHSMEASDEGVYECMAKSPMGEVKSQP 41
+ + C + + +
Sbjct: 52 PAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLEL 90
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 319
Score = 26.5 bits (57), Expect = 5.8
Identities = 24/181 (13%), Positives = 46/181 (25%), Gaps = 9/181 (4%)
Query: 157 GMTSMFWDTVQPREQINQLTA-------YIDGSQVYGFTEERSRVLRDIRNDNGFLRQGI 209
G + + V E I + D + +Y EE + +R D R+ I
Sbjct: 20 GFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDI 79
Query: 210 LSAANKPYLPIAGATEVDCRRDPTESNIGCLLAGDIRANEQVGLLAMHTLWLREHNRMAK 269
+ C +S + I EH ++
Sbjct: 80 FYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLF 139
Query: 270 DLRDINPHWDGETLFHETRKI--VGAMMQHITYTQWLPHILGPDGMVKINIEWKFIYGRM 327
+ DI W+ + +G + + + + G N +Y
Sbjct: 140 ETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ 199
Query: 328 R 328
Sbjct: 200 S 200
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin
reductase) N-terminal domain {Cyanobacterium (Anabaena
sp.), pcc 7119 [TaxId: 1167]}
Length = 133
Score = 25.5 bits (55), Expect = 6.8
Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Query: 59 YGYEKP-PARVVSNELISTESITPDPVITHMV-MQWGQFLDHDLDHAIPATSLESWEGID 116
Y P +V+SNE + E + H+ G L + +I +
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGI--VQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGK 64
Query: 117 CKKSCAFSPPCFPMEVPHDDPRVK 140
+K +S DD +
Sbjct: 65 PEKLRLYSIASTRHGDDVDDKTIS 88
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 25.5 bits (55), Expect = 6.8
Identities = 6/16 (37%), Positives = 6/16 (37%)
Query: 13 LMIHSMEASDEGVYEC 28
L I SD G Y
Sbjct: 85 LSIRDARMSDAGRYFF 100
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 25.0 bits (53), Expect = 7.6
Identities = 6/39 (15%), Positives = 11/39 (28%)
Query: 1 MAHPPEGSGCNNLMIHSMEASDEGVYECMAKSPMGEVKS 39
+ + +D G Y C S G ++
Sbjct: 56 FFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQA 94
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 24.5 bits (52), Expect = 9.1
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 9 GCNNLMIHSMEASDEGVYECMAKSPMGEVKSQPAR 43
L+ + DEGVY C + +G+ + +
Sbjct: 59 SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLK 93
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.433
Gapped
Lambda K H
0.267 0.0517 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,487,830
Number of extensions: 70684
Number of successful extensions: 223
Number of sequences better than 10.0: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 51
Length of query: 372
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 285
Effective length of database: 1,213,086
Effective search space: 345729510
Effective search space used: 345729510
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.1 bits)