BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11185
(312 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 142/195 (72%), Gaps = 4/195 (2%)
Query: 102 YDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQ-GTTWGLGGTCVNVGCIPKKL 160
YDYD +V LD+V P+P GT WG+GGTCVNVGCIPKKL
Sbjct: 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKL 67
Query: 161 MHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDY 220
MHQA+LLGEA+ +A AYGW + + ++ +W L ++VQNH+KSVNWVTRV LRDKKV+Y
Sbjct: 68 MHQASLLGEAVHEAAAYGWNVDD--KIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEY 125
Query: 221 LNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLE 280
+N LG F+D H++ A +K+GE+ T+TA+ +IA GGRP YPDIPGA E+ I+SDD+FSL+
Sbjct: 126 INGLGSFVDSHTLLAKLKSGER-TITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLD 184
Query: 281 KPPGKTLVVGAGYIG 295
+ PGKTLVVGAGYIG
Sbjct: 185 REPGKTLVVGAGYIG 199
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD 81
GLECAGFL GLG+ TVM+RS+ LRGFDQQMA+L+ M E G+ FL K +PLSV K D
Sbjct: 199 GLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD 258
Query: 82 GKLKVQYKNVAEVRQDNTHKYD 103
GKL V+YKNV E +++ YD
Sbjct: 259 GKLLVKYKNV-ETGEESEDVYD 279
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 231 bits (588), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 142/195 (72%), Gaps = 4/195 (2%)
Query: 102 YDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQ-GTTWGLGGTCVNVGCIPKKL 160
YDYD +V LD+V P+P GT WG+GGTCVNVGCIPKKL
Sbjct: 4 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKL 63
Query: 161 MHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDY 220
MHQA+LLGEA+ +A AYGW + + ++ +W L ++VQNH+KSVNWVTRV LRDKKV+Y
Sbjct: 64 MHQASLLGEAVHEAAAYGWNVDD--KIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEY 121
Query: 221 LNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLE 280
+N LG F+D H++ A +K+GE+ T+TA+ +IA GGRP YPDIPGA E+ I+SDD+FSL+
Sbjct: 122 INGLGSFVDSHTLLAKLKSGER-TITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLD 180
Query: 281 KPPGKTLVVGAGYIG 295
+ PGKTLVVGAGYIG
Sbjct: 181 REPGKTLVVGAGYIG 195
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD 81
GLECAGFL GLG+ TVM+RS+ LRGFDQQMA+L+ M E G+ FL K +PLSV K D
Sbjct: 195 GLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD 254
Query: 82 GKLKVQYKNVAEVRQDNTHKYD 103
GKL V+YKNV E +++ YD
Sbjct: 255 GKLLVKYKNV-ETGEESEDVYD 275
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 231 bits (588), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 142/195 (72%), Gaps = 4/195 (2%)
Query: 102 YDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQ-GTTWGLGGTCVNVGCIPKKL 160
YDYD +V LD+V P+P GT WG+GGTCVNVGCIPKKL
Sbjct: 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKL 67
Query: 161 MHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDY 220
MHQA+LLGEA+ +A AYGW + + ++ +W L ++VQNH+KSVNWVTRV LRDKKV+Y
Sbjct: 68 MHQASLLGEAVHEAAAYGWNVDD--KIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEY 125
Query: 221 LNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLE 280
+N LG F+D H++ A +K+GE+ T+TA+ +IA GGRP YPDIPGA E+ I+SDD+FSL+
Sbjct: 126 INGLGSFVDSHTLLAKLKSGER-TITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLD 184
Query: 281 KPPGKTLVVGAGYIG 295
+ PGKTLVVGAGYIG
Sbjct: 185 REPGKTLVVGAGYIG 199
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD 81
GLECAGFL GLG+ TVM+RS+ LRGFDQQMA+L+ M E G+ FL K +PLSV K D
Sbjct: 199 GLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD 258
Query: 82 GKLKVQYKNVAEVRQDNTHKYD 103
GKL V+YKNV E +++ YD
Sbjct: 259 GKLLVKYKNV-ETGEESEDVYD 279
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 223 bits (569), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 96 QDNTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGC 155
+D YD+D +KV+VLD+V P+P GT WGLGGTCVNVGC
Sbjct: 5 KDAPKSYDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNWGLGGTCVNVGC 64
Query: 156 IPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD 215
IPKKLMHQAALLG+A+KD+ YGW++ + +V+H+W + E+VQNH+ S+NW RV LR+
Sbjct: 65 IPKKLMHQAALLGQALKDSRNYGWKLED--TVKHDWEKMTESVQNHIGSLNWGYRVALRE 122
Query: 216 KKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDD 275
KKV Y NA GKFI H + AT G++K +AE LIATG RP Y IPG KE+CISSDD
Sbjct: 123 KKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDD 182
Query: 276 IFSLEKPPGKTLVVGAGYI 294
+FSL PGKTLVVGA Y+
Sbjct: 183 LFSLPYCPGKTLVVGASYV 201
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL--- 79
LECAGFL G+G + TVM+RS+ LRGFDQ MA I E M E G+ F+ + +P + ++
Sbjct: 203 LECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAG 262
Query: 80 ADGKLKVQYKNV 91
G+LKV K+
Sbjct: 263 TPGRLKVTAKST 274
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 223 bits (569), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 96 QDNTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGC 155
+D YD+D +KV+VLD+V P+P GT WGLGGTCVNVGC
Sbjct: 5 KDAPKSYDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTRWGLGGTCVNVGC 64
Query: 156 IPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD 215
IPKKLMHQAALLG+A+KD+ YGW++ + +V+H+W + E+VQNH+ S+NW RV LR+
Sbjct: 65 IPKKLMHQAALLGQALKDSRNYGWKLED--TVKHDWEKMTESVQNHIGSLNWGYRVALRE 122
Query: 216 KKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDD 275
KKV Y NA GKFI H + AT G++K +AE LIATG RP Y IPG KE+CISSDD
Sbjct: 123 KKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDD 182
Query: 276 IFSLEKPPGKTLVVGAGYI 294
+FSL PGKTLVVGA Y+
Sbjct: 183 LFSLPYCPGKTLVVGASYV 201
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL--- 79
LECAGFL G+G + TVM+RS+ LRGFDQ MA I E M E G+ F+ + +P + ++
Sbjct: 203 LECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAG 262
Query: 80 ADGKLKVQYKNV 91
G+LKV K+
Sbjct: 263 TPGRLKVTAKST 274
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Query: 96 QDNTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGC 155
+D YDYD +KV+VLD+V P+P GT WGLGGTCVNVGC
Sbjct: 27 EDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGC 86
Query: 156 IPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD 215
IPKKLMHQAALLG+A++D+ YGW++ ++V+H+W + EAVQNH+ S+NW RV LR+
Sbjct: 87 IPKKLMHQAALLGQALQDSRNYGWKVE--ETVKHDWDRMIEAVQNHIGSLNWGYRVALRE 144
Query: 216 KKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDD 275
KKV Y NA G+FI H ++AT G++K +AE LIATG RP Y IPG KE+CISSDD
Sbjct: 145 KKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDD 204
Query: 276 IFSLEKPPGKTLVVGAGYI 294
+FSL PGKTLVVGA Y+
Sbjct: 205 LFSLPYCPGKTLVVGASYV 223
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL--- 79
LECAGFL G+G + TVM+RS+ LRGFDQ MA I E M E G+ F+ + +P+ V ++
Sbjct: 225 LECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAG 284
Query: 80 ADGKLKV--QYKNVAEV 94
G+L+V Q N E+
Sbjct: 285 TPGRLRVVAQSTNSEEI 301
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 146/217 (67%), Gaps = 4/217 (1%)
Query: 96 QDNTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGC 155
+D YDYD +KV+VLD+V P+P GT WGLGGTCVNVGC
Sbjct: 19 EDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGC 78
Query: 156 IPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD 215
IPKKLMHQAALLG+A++D+ YGW++ ++V+H+W + EAVQNH+ S+NW RV LR+
Sbjct: 79 IPKKLMHQAALLGQALQDSRNYGWKVE--ETVKHDWDRMIEAVQNHIGSLNWGYRVALRE 136
Query: 216 KKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDD 275
KKV Y NA G+FI H ++AT G++K +AE LIATG RP Y IPG KE+CISSDD
Sbjct: 137 KKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDD 196
Query: 276 IFSLEKPPGKTLVVGAGYIGKLETWDSNSGCG-NVTI 311
+FSL PGKTLVVGA Y+ LE +G G +VT+
Sbjct: 197 LFSLPYCPGKTLVVGASYVA-LECAGFLAGIGLDVTV 232
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL-- 79
LECAGFL G+G + TVM+RS+ LRGFDQ MA I E M E G+ F+ + +P+ V ++
Sbjct: 216 ALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEA 275
Query: 80 -ADGKLKV--QYKNVAEV 94
G+L+V Q N E+
Sbjct: 276 GTPGRLRVVAQSTNSEEI 293
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 146/217 (67%), Gaps = 4/217 (1%)
Query: 96 QDNTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGC 155
+D YDYD +KV+VLD+V P+P GT WGLGGTCVNVGC
Sbjct: 25 EDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGC 84
Query: 156 IPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD 215
IPKKLMHQAALLG+A++D+ YGW++ ++V+H+W + EAVQNH+ S+NW RV LR+
Sbjct: 85 IPKKLMHQAALLGQALQDSRNYGWKVE--ETVKHDWDRMIEAVQNHIGSLNWGYRVALRE 142
Query: 216 KKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDD 275
KKV Y NA G+FI H ++AT G++K +AE LIATG RP Y IPG KE+CISSDD
Sbjct: 143 KKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDD 202
Query: 276 IFSLEKPPGKTLVVGAGYIGKLETWDSNSGCG-NVTI 311
+FSL PGKTLVVGA Y+ LE +G G +VT+
Sbjct: 203 LFSLPYCPGKTLVVGASYVA-LECAGFLAGIGLDVTV 238
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL--- 79
LECAGFL G+G + TVM+RS+ LRGFDQ MA I E M E G+ F+ + +P+ V ++
Sbjct: 223 LECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAG 282
Query: 80 ADGKLKV--QYKNVAEV 94
G+L+V Q N E+
Sbjct: 283 TPGRLRVVAQSTNSEEI 299
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 146/217 (67%), Gaps = 4/217 (1%)
Query: 96 QDNTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGC 155
+D YDYD +KV+VLD+V P+P GT WGLGGTCVNVGC
Sbjct: 25 EDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGC 84
Query: 156 IPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD 215
IPKKLMHQAALLG+A++D+ YGW++ ++V+H+W + EAVQNH+ S+NW RV LR+
Sbjct: 85 IPKKLMHQAALLGQALQDSRNYGWKVE--ETVKHDWDRMIEAVQNHIGSLNWGYRVALRE 142
Query: 216 KKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDD 275
KKV Y NA G+FI H ++AT G++K +AE LIATG RP Y IPG KE+CISSDD
Sbjct: 143 KKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDD 202
Query: 276 IFSLEKPPGKTLVVGAGYIGKLETWDSNSGCG-NVTI 311
+FSL PGKTLVVGA Y+ LE +G G +VT+
Sbjct: 203 LFSLPYCPGKTLVVGASYVA-LECAGFLAGIGLDVTV 238
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL--- 79
LECAGFL G+G + TVM+RS+ LRGFDQ MA I E M E G+ F+ + +P+ V ++
Sbjct: 223 LECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAG 282
Query: 80 ADGKLKV--QYKNVAEV 94
G+L+V Q N E+
Sbjct: 283 TPGRLRVVAQSTNSEEI 299
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
+KV V DYV PSP+GT WGLGGTCVNVGCIPKKLMHQAALLG I+DA YGWE+ +
Sbjct: 30 KKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV--AQP 87
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLT 246
VQHNW + EAVQNHVKS+NW RV L+D+KV Y N F+D+H+V K G+ L+
Sbjct: 88 VQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLS 147
Query: 247 AENILIATGGRPNYP-DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
AE+I+IATGGRP YP + GA E+ I+SDDIF L++ PGKTLVVGA Y+
Sbjct: 148 AEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYV 196
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADG 82
LECAGFL G+G + TVM+RS+PLRGFDQQM+ L+ E M G FL C+P + KL
Sbjct: 198 LECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN 257
Query: 83 KLKVQYKNVAEVRQDN 98
+L+V +++ A ++D
Sbjct: 258 QLQVTWEDHASGKEDT 273
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
+KV V DYV PSP+GT WGLGGTCVNVGCIPKKLMHQAALLG I+DA YGWE+ +
Sbjct: 56 KKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV--AQP 113
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLT 246
VQHNW + EAVQNHVKS+NW RV L+D+KV Y N F+D+H+V K G+ L+
Sbjct: 114 VQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLS 173
Query: 247 AENILIATGGRPNYP-DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
AE+I+IATGGRP YP + GA E+ I+SDDIF L++ PGKTLVVGA Y+
Sbjct: 174 AEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYV 222
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADG 82
LECAGFL G+G + TVM+RS+PLRGFDQQM+ L+ E M G FL C+P + KL
Sbjct: 224 LECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN 283
Query: 83 KLKVQYKNVAEVRQDN 98
+L+V +++ A ++D
Sbjct: 284 QLQVTWEDHASGKEDT 299
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 128/198 (64%), Gaps = 1/198 (0%)
Query: 98 NTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIP 157
N KYDYD K VLDYV P+P GTTWGLGGTCVNVGCIP
Sbjct: 102 NESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIP 161
Query: 158 KKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKK 217
KKLMHQA LL A++DA +GW + K + HNW+ + E VQ+H+ S+NW +V LRD +
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSK-ISHNWSTMVEGVQSHIGSLNWGYKVALRDNQ 220
Query: 218 VDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIF 277
V YLNA G+ I H V+ T KN + T+T I++ATG RP YP+IPGA E+ I+SDD+F
Sbjct: 221 VTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLF 280
Query: 278 SLEKPPGKTLVVGAGYIG 295
SL PGKTLV+GA Y+
Sbjct: 281 SLPYFPGKTLVIGASYVA 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL 79
LECAGFL LG + TVM+RS+ LRGFDQQMA+ + + M GV F C+P + +L
Sbjct: 298 ALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQL 355
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 128/198 (64%), Gaps = 1/198 (0%)
Query: 98 NTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIP 157
N KYDYD K VLDYV P+P GTTWGLGGTCVNVGCIP
Sbjct: 102 NESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIP 161
Query: 158 KKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKK 217
KKLMHQA LL A++DA +GW + K + HNW+ + E VQ+H+ S+NW +V LRD +
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSK-ISHNWSTMVEGVQSHIGSLNWGYKVALRDNQ 220
Query: 218 VDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIF 277
V YLNA G+ I H V+ T KN + T+T I++ATG RP YP+IPGA E+ I+SDD+F
Sbjct: 221 VTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLF 280
Query: 278 SLEKPPGKTLVVGAGYIG 295
SL PGKTLV+GA Y+
Sbjct: 281 SLPYFPGKTLVIGASYVA 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL 79
LECAGFL LG + TVM+RS+ LRGFDQQMA+ + + M GV F C+P + +L
Sbjct: 298 ALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQL 355
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 128/198 (64%), Gaps = 1/198 (0%)
Query: 98 NTHKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIP 157
N KYDYD K VLDYV P+P GTTWGLGGTCVNVGCIP
Sbjct: 102 NESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIP 161
Query: 158 KKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKK 217
KKLMHQA LL A++DA +GW + K + HNW+ + E VQ+H+ S+NW +V LRD +
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSK-ISHNWSTMVEGVQSHIGSLNWGYKVALRDNQ 220
Query: 218 VDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIF 277
V YLNA G+ I H V+ T KN + T+T I++ATG RP YP+IPGA E+ I+SDD+F
Sbjct: 221 VTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLF 280
Query: 278 SLEKPPGKTLVVGAGYIG 295
SL PGKTLV+GA Y+
Sbjct: 281 SLPYFPGKTLVIGASYVA 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL 79
LECAGFL LG + TVM+RS+ LRGFDQQMA+ + + M GV F C+P + +L
Sbjct: 298 ALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQL 355
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 125/200 (62%), Gaps = 7/200 (3%)
Query: 100 HKYDYDXXXXXXXXXXXXXXXXXXXXXRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKK 159
H YDYD +V++ DYV PS QGT WG+GGTCVNVGC+PKK
Sbjct: 39 HTYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKK 98
Query: 160 LMHQAALLGEAIK-DAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKV 218
LMH A +G K D+ AYGW+ N+K H+W L VQ+H++S+N+ LR KV
Sbjct: 99 LMHYAGHMGSIFKLDSKAYGWKFDNLK---HDWKKLVTTVQSHIRSLNFSYMTGLRSSKV 155
Query: 219 DYLNALGKFIDQHSVEATMKN--GEKKTLTAENILIATGGRPNYP-DIPGAKEHCISSDD 275
Y+N L K D+++V +K +++T+T + ILIATG RP+ P D+ GAKE I+SDD
Sbjct: 156 KYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEGAKELSITSDD 215
Query: 276 IFSLEKPPGKTLVVGAGYIG 295
IFSL+K PGKTLVVGA Y+
Sbjct: 216 IFSLKKDPGKTLVVGASYVA 235
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 22 GLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD 81
LEC+GFLN LG++ TV +RS+ LRGFDQQ A + M E GV F + LP +TK+ D
Sbjct: 235 ALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKM-D 293
Query: 82 GKLKVQYKN 90
K+ V++ +
Sbjct: 294 DKILVEFSD 302
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 10/151 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSV-QHNWANLREAVQNHVKS 204
LGGTCVNVGC+PKK+M AA + EAI YG + ++ + NW L + ++
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIH---MYGPDYGFDTTINKFNWETLIASRTAYIDR 94
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIP 264
++ +L VD + +F+D ++E NGE T+TA++ILIATGGRP++PDIP
Sbjct: 95 IHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NGE--TITADHILIATGGRPSHPDIP 149
Query: 265 GAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
G E+ I SD F+L P + VVGAGYIG
Sbjct: 150 GV-EYGIDSDGFFALPALPERVAVVGAGYIG 179
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 22 GLECAGFLNGLGFNATVM-IRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLA 80
G+E G +NGLG + + PL FD +++ + E M G +P +V K
Sbjct: 179 GVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNT 238
Query: 81 DGKLKVQYKN 90
DG L ++ ++
Sbjct: 239 DGSLTLELED 248
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 10/151 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSV-QHNWANLREAVQNHVKS 204
LGGTCVNVGC+PKK+M AA + EAI YG + ++ + NW L + ++
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIH---MYGPDYGFDTTINKFNWETLIASRTAYIDR 94
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIP 264
++ +L VD + +F+D ++E NGE T+TA++ILIATGGRP++PDIP
Sbjct: 95 IHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NGE--TITADHILIATGGRPSHPDIP 149
Query: 265 GAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
G E+ I SD F+L P + VVGAGYI
Sbjct: 150 GV-EYGIDSDGFFALPALPERVAVVGAGYIA 179
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 22 GLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLA 80
+E AG +NGLG + +R PLR FD +++ + E M G +P +V K
Sbjct: 179 AVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNT 238
Query: 81 DGKLKVQYKN 90
DG L ++ ++
Sbjct: 239 DGSLTLELED 248
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKKLM A + ++++ +GWE + SV+ NW L A V +
Sbjct: 51 LGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF-DGSSVKANWKKLIAAKNEAVLDI 109
Query: 206 NWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGEKKTLTAENILIATGGRPNY 260
N M D + +D+ G ++ V A K+ K+ L A++IL+ATG P
Sbjct: 110 NKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQM 169
Query: 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
P IPG EHCISS++ F L +PP + L VG G+I
Sbjct: 170 PAIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFI 202
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 23 LECAGFLNGL---GFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTK 78
+E AG N G T+ R+ + LRGFD+ + + + +++ G+ + P V+
Sbjct: 204 VEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSL 263
Query: 79 LADGKLKVQYKN 90
DG V +++
Sbjct: 264 NTDGSKHVTFES 275
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKKLM A + ++++ +GWE + SV+ NW L A V +
Sbjct: 48 LGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF-DGSSVKANWKKLIAAKNEAVLDI 106
Query: 206 NWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGEKKTLTAENILIATGGRPNY 260
N M D + +D+ G ++ V A K+ K+ L A++IL+ATG P
Sbjct: 107 NKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQM 166
Query: 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
P IPG EHCISS++ F L +PP + L VG G+I
Sbjct: 167 PAIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFI 199
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 23 LECAGFLNGL---GFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTK 78
+E AG N G T+ R+ + LRGFD+ + + + +++ G+ + P V+
Sbjct: 201 VEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSL 260
Query: 79 LADGKLKVQYKN 90
DG V +++
Sbjct: 261 NTDGSKHVTFES 272
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ L EA++DA +G + +W L ++ ++
Sbjct: 38 LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQ---ASGGTLDWPRLVAGRDRYIGAI 94
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPG 265
N + + ++ +F+D H++E E + L+A++I+IATGGRP P +PG
Sbjct: 95 NSFWDGYVERLGITRVDGHARFVDAHTIEV-----EGQRLSADHIVIATGGRPIVPRLPG 149
Query: 266 AKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
A E I+SD F+L++ P + ++GAGYIG
Sbjct: 150 A-ELGITSDGFFALQQQPKRVAIIGAGYIG 178
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
++V V+D + LGGTCVNVGC+PKKLM A E ++++ +GWE + +
Sbjct: 29 KRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEF-DRTT 87
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGE 241
++ W L V ++N M RD + +++ G ++ V A +
Sbjct: 88 LRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAV 147
Query: 242 KKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
K+ L ENIL+A+G P+ P+IPG EHCISS++ F L +PP + L VG G+I
Sbjct: 148 KERLETENILLASGSWPHMPNIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFI 199
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKN 90
LRGFD + + + +++ G+ L K P V ADG V +++
Sbjct: 227 LRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFES 272
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 7/173 (4%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
++V V+D + LGGTCVNVGC+PKKLM A E ++++ +GWE + +
Sbjct: 30 KRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEF-DRTT 88
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGE 241
++ W NL V ++N M RD + +++ G ++ V A +
Sbjct: 89 LRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAV 148
Query: 242 KKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
K+ L E+IL+A+G P+ P+IPG EHCISS++ F L +PP + L VG G+I
Sbjct: 149 KERLETEHILLASGSWPHMPNIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFI 200
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKN 90
LRGFD + + + +++ G+ L K P V ADG V +++
Sbjct: 228 LRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFES 273
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 7/173 (4%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
++V V+D + LGGTCVNVGC+PKKLM A E ++++ +GWE + +
Sbjct: 28 KRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEF-DRTT 86
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGE 241
++ W NL V ++N M RD + +++ G ++ V A +
Sbjct: 87 LRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAV 146
Query: 242 KKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
K+ L E+IL+A+G P+ P+IPG EHCISS++ F L +PP + L VG G+I
Sbjct: 147 KERLETEHILLASGSWPHMPNIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFI 198
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKN 90
LRGFD + + + +++ G+ L K P V ADG V +++
Sbjct: 226 LRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFES 271
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 7/173 (4%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
++V V+D + LGGTCVNVGC+PKKLM A E ++++ +GWE + +
Sbjct: 29 KRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEF-DRTT 87
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGE 241
++ W NL V ++N M RD + +++ G ++ V A +
Sbjct: 88 LRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAV 147
Query: 242 KKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
K+ L E+IL+A+G P+ P+IPG EHCISS++ F L +PP + L VG G+I
Sbjct: 148 KERLETEHILLASGSWPHMPNIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFI 199
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKN 90
LRGFD + + + +++ G+ L K P V ADG V +++
Sbjct: 227 LRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFES 272
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
+KV V+D LGGTCVNVGC+PKKLM A + I+++ +GWE+ + +S
Sbjct: 49 KKVAVVDVQATHGPPLFAALGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEM-DRES 107
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKK-VDYLNALGKFIDQHSVEATMKNGEK--- 242
+ NW L A V S+N + M D + + + G D H+V ++ E
Sbjct: 108 LCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTV--VVRKSEDPHS 165
Query: 243 ---KTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
+TL E ILIATG P +PG E CI+S++ F LE P + L VG GYI
Sbjct: 166 DVLETLDTEYILIATGSWPTRLGVPG-DEFCITSNEAFYLEDAPKRMLCVGGGYI 219
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 2 NKRNHKEHAPKGNLKDKVDSG---LECAGFLNGL----GFNATVMIRSVPLRGFDQQMAK 54
N+ + E APK L V G +E AG NG G+ + LRGFD ++ K
Sbjct: 199 NEAFYLEDAPKRMLC--VGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRK 256
Query: 55 LICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97
+ +++ G+ P +TK DG V + + E D
Sbjct: 257 SLTKQLGANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYD 299
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 127 RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKS 186
+KV V+D LGGTCVNVGC+PKKLM A + I+++ +GWE+ + +S
Sbjct: 49 KKVAVVDVQATHGPPLFAALGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEM-DRES 107
Query: 187 VQHNWANLREAVQNHVKSVNWVTRVMLRDKK-VDYLNALGKFIDQHSVEATMKNGEK--- 242
+ NW L A V S+N + M D + + + G D H+V ++ E
Sbjct: 108 LCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTV--VVRKSEDPHS 165
Query: 243 ---KTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
+TL E ILIATG P +PG E CI+S++ F LE P + L VG GYI
Sbjct: 166 DVLETLDTEYILIATGSWPTRLGVPG-DEFCITSNEAFYLEDAPKRMLCVGGGYI 219
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 2 NKRNHKEHAPKGNLKDKVDSG---LECAGFLNGL----GFNATVMIRSVPLRGFDQQMAK 54
N+ + E APK L V G +E AG NG G+ + LRGFD ++ K
Sbjct: 199 NEAFYLEDAPKRMLC--VGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRK 256
Query: 55 LICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97
+ +++ G+ P +TK DG V + + E D
Sbjct: 257 SLTKQLGANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYD 299
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW--EIP-NVKSVQHNWANLREAVQNH 201
LGGTCVNVGC+PKK+M A+ L + A YG +P + + + NW ++ +
Sbjct: 44 ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTFNWPEFKQKRDAY 103
Query: 202 VKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261
V +N + + L +KVD + +F +VE ++ + +A +IL+ATGG+ +P
Sbjct: 104 VHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFP 163
Query: 262 D-IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
+ IPG E SD F LE+ P K +VVGAGYIG
Sbjct: 164 ENIPGF-ELGTDSDGFFRLEEQPKKVVVVGAGYIG 197
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGG--VHFLHKCLPLSVTK 78
G+E AG +GLG ++IR LR FD+ + I + + G VH L K + +
Sbjct: 197 GIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNV 256
Query: 79 LADGKLKVQ 87
D KLK+
Sbjct: 257 ETD-KLKIH 264
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTCVNVGC+PKKLM A + I+++ +GWE+ + +SV+ NW L A V
Sbjct: 47 ALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL-DRESVRPNWKALIAAKNKAVSG 105
Query: 205 VNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGEKKTLTAENILIATGGRPN 259
+N M D + + + G D H+V A + +TL E IL+ATG P
Sbjct: 106 INDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 165
Query: 260 YPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
+ I G + CI+S++ F L++ P + L VG GYI
Sbjct: 166 HLGIEG-DDLCITSNEAFYLDEAPKRALCVGGGYI 199
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97
LRGFD ++ K + E++ G++ P VTK ADG V +++ AE D
Sbjct: 227 LRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYD 279
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTCVNVGC+PKKLM A + I+++ +GWE+ + +SV+ NW L A V
Sbjct: 46 ALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL-DRESVRPNWKALIAAKNKAVSG 104
Query: 205 VNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGEKKTLTAENILIATGGRPN 259
+N M D + + + G D H+V A + +TL E IL+ATG P
Sbjct: 105 INDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 164
Query: 260 YPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
+ I G + CI+S++ F L++ P + L VG GYI
Sbjct: 165 HLGIEG-DDLCITSNEAFYLDEAPKRALCVGGGYI 198
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97
LRGFD ++ K + E++ G++ P VTK ADG V +++ AE D
Sbjct: 226 LRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYD 278
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTCVNVGC+PKKLM A + I+++ +GWE+ + +SV+ NW L A V
Sbjct: 46 ALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL-DRESVRPNWKALIAAKNKAVSG 104
Query: 205 VNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGEKKTLTAENILIATGGRPN 259
+N M D + + + G D H+V A + +TL E IL+ATG P
Sbjct: 105 INDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 164
Query: 260 YPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
+ I G + CI+S++ F L++ P + L VG GYI
Sbjct: 165 HLGIEG-DDLCITSNEAFYLDEAPKRALCVGGGYI 198
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97
LRGFD ++ K + E++ G++ P VTK ADG V +++ AE D
Sbjct: 226 LRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYD 278
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTCVNVGC+PKKLM A + I+++ +GWE+ + +SV+ NW L A V
Sbjct: 47 ALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL-DRESVRPNWKALIAAKNKAVSG 105
Query: 205 VNWVTRVMLRDKK-VDYLNALGKFIDQHSV----EATMKNGEKKTLTAENILIATGGRPN 259
+N M D + + + G D H+V A + +TL E IL+ATG P
Sbjct: 106 INDSYEGMFADTEGLTFHQGWGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQ 165
Query: 260 YPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYI 294
+ I G + CI+S++ F L++ P + L VG GYI
Sbjct: 166 HLGIEG-DDLCITSNEAFYLDEAPKRALCVGGGYI 199
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 45 LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97
LRGFD ++ K + E++ G++ P VTK ADG V +++ AE D
Sbjct: 227 LRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYD 279
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 53 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 109
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 110 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 166
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 167 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 198
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 198 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 245
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 54 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 110
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 111 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 167
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 168 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 199
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 199 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 55 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 111
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 112 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 168
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 169 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 200
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 200 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 247
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 37 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 93
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 94 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 150
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 151 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 182
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 182 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 229
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 54 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 110
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 111 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 167
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 168 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 199
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 199 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 37 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 93
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 94 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 150
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 151 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 182
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 182 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 229
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 144 WGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVK 203
+ +GGTCV GC+PKKL A+ + ++ +GW+ + NW L A +
Sbjct: 58 YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPI---FNWEKLVAAKNKEIS 114
Query: 204 SVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDI 263
+ + R L++ V + F+D+H++E ++ GE+ ++AE ILIATG +
Sbjct: 115 RLEGLYREGLQNSNVHIYESRAVFVDEHTLELSV-TGER--ISAEKILIATGAKIVSNSA 171
Query: 264 PGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
+ C++S++IF LEK P ++VG GYIG
Sbjct: 172 IKGSDLCLTSNEIFDLEKLPKSIVIVGGGYIG 203
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVG +PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 54 LGGTCVNVGXVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 110
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 111 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 167
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 168 IPGA-SLGITSDGFFQLEELPGRSVIVGAGYIA 199
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 199 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNXTEELENAGVEVL 246
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGT VNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 54 LGGTXVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 110
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 111 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 167
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 168 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 199
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 199 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVG +PKK+M A+ E + D YG+ P+ + + NW ++E +V +
Sbjct: 54 LGGTCVNVGXVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEKRDAYVSRL 110
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP---D 262
N + + L ++ + F + T++ KK TA +ILIATGG P+ P
Sbjct: 111 NAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIEVSGKK-YTAPHILIATGGMPSTPHESQ 167
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 168 IPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 199
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 199 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 15/159 (9%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M AA + + ++++ YG++ N L E +++ +
Sbjct: 36 LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFD----TKFSFNLPLLVERRDKYIQRL 91
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHS--VEATMKNGEK-------KTLTAENILIATGG 256
N + R L KVD F+ ++ ++ T N K + L NILIA G
Sbjct: 92 NNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGN 151
Query: 257 RPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
+P +P + G E+ ISSD+ F++ K K +VG+GYI
Sbjct: 152 KPVFPPVKGI-ENTISSDEFFNI-KESKKIGIVGSGYIA 188
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 24/161 (14%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGGTCVNVGC+PKK+M A+ E + D YG+ P+ + + NW ++E +
Sbjct: 37 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGF--PSCEG-KFNWRVIKEK-----RDA 88
Query: 206 NWVTRVMLRDKKVDYLNALGK-FIDQHSVEATMKNGEKKTL-------TAENILIATGGR 257
+V+R+ + Y N L K I+ A + K T+ TA +ILIATGG
Sbjct: 89 XYVSRL----NAIXYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGM 144
Query: 258 PNYP---DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P+ P IPGA I+SD F LE+ PG++++VGAGYI
Sbjct: 145 PSTPHESQIPGASLG-ITSDGFFQLEELPGRSVIVGAGYIA 184
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 22 GLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFL 68
+E AG L+ LG ++MIR LR FD ++ EE+ GV L
Sbjct: 184 AVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 231
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 147 GGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVN 206
GGTCV GC+PKKL A+ E +DA +GW V + +WA L A + + +
Sbjct: 40 GGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGW---TVGESRFDWAKLVAAKEQEIARLE 96
Query: 207 WVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGA 266
+ R L + + L+ + ++V+ + +G KT+TAE I+IA GG P+ D
Sbjct: 97 GLYRKGLANAGAEILDTRAELAGPNTVK-LLASG--KTVTAERIVIAVGGHPSPHDALPG 153
Query: 267 KEHCISSDDIFSLEKPPGKTLVVGAGYI 294
E CI+S++ F L P L+ G GYI
Sbjct: 154 HELCITSNEAFDLPALPESILIAGGGYI 181
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPN----VKSVQHNWANLREAVQNH 201
LGGTC+NVGCIP K ALL + +A+G + + + V+ N + E
Sbjct: 41 LGGTCLNVGCIPSK-----ALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTA 95
Query: 202 VKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN-Y 260
VK++ + + KV ++N GK ++ V AT +G + + +NILIATG +
Sbjct: 96 VKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPF 155
Query: 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P I ++ +SS SL+K P K +V+GAG IG
Sbjct: 156 PGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIG 190
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPN----VKSVQHNWANLREAVQNH 201
LGGTC+NVGCIP K ALL + +A+G + + + V+ N + E
Sbjct: 62 LGGTCLNVGCIPSK-----ALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTA 116
Query: 202 VKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN-Y 260
VK++ + + KV ++N GK ++ V AT +G + + +NILIATG +
Sbjct: 117 VKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPF 176
Query: 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P I ++ +SS SL+K P K +V+GAG IG
Sbjct: 177 PGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIG 211
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPN----VKSVQHNWANLREAVQNH 201
LGGTC+NVGCIP K ALL + +A+G + + + V+ N + E
Sbjct: 41 LGGTCLNVGCIPSK-----ALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTA 95
Query: 202 VKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN-Y 260
VK++ + + KV ++N GK ++ V AT +G + + +NILIATG +
Sbjct: 96 VKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPF 155
Query: 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P I ++ +SS SL+K P K +V+GAG IG
Sbjct: 156 PGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIG 190
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTC+NVGCIP K L+H + + EA +G ++ NV+ +L + K+
Sbjct: 41 LGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVE------IDLAAMMGQKDKA 94
Query: 205 VNWVTR---VMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGR-PNY 260
V+ +TR + + KV Y+ GKF+ + GE + ++I+IATG +
Sbjct: 95 VSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154
Query: 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P + ++ +SS +L + P K +V+GAGYIG
Sbjct: 155 PGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIG 189
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTC+NVGCIP K L+H L +A + YG + + V + A +++ + VK
Sbjct: 37 LGGTCLNVGCIPSKALLHATHLYHDAHANFARYG--LMGGEGVTMDSAKMQQQKERAVKG 94
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN-YPDI 263
+ + + KV Y G F HS+ +G+++ L + +IATG P P +
Sbjct: 95 LTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFL 154
Query: 264 PGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P ++ +SS +L + P +V+G G IG
Sbjct: 155 PFDEKVVLSSTGALALPRVPKTMVVIGGGVIG 186
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 229 DQHSVEATMKNGEKKTLTAENILIATGGRP 258
D S+E KNG+++T+T E +L++ G RP
Sbjct: 247 DSVSLEVEGKNGKRETVTCEALLVSVGRRP 276
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 147 GGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVK-SVQHNWANLREAVQNHVKS 204
GGTC+NVGCIP K L+H + +A A G E+ N K ++Q A+ V+++V
Sbjct: 61 GGTCLNVGCIPSKALLHASEXFHQAQHGLEALGVEVANPKLNLQKXXAHKDATVKSNVDG 120
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIP 264
V++ + + K+D GK + Q V T + GE++ L A+N++IATG + IP
Sbjct: 121 VSF----LFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATG--SDVAGIP 174
Query: 265 GA-----KEHCISSDDIFSLEKPP 283
G ++ +SS +LEK P
Sbjct: 175 GVEVAFDEKTIVSSTGALALEKVP 198
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 237 MKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCI 271
+K GE TL AE +LIATG +P+ + AK +
Sbjct: 279 VKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVV 313
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAV-AYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTC+NVGCIP K + ++ K+A +G E K V + + N VK+
Sbjct: 44 LGGTCLNVGCIPSKALLDSSYKYHEAKEAFKVHGIE---AKGVTIDVPAMVARKANIVKN 100
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP-NYPDI 263
+ + + V GK + VE T +G+ + L AEN++IA+G RP P
Sbjct: 101 LTGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPA 160
Query: 264 PGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P + + + S + P K V+GAG IG
Sbjct: 161 PLSDDIIVDSTGALEFQAVPKKLGVIGAGVIG 192
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 147 GGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNV----KSVQHNWANLREAVQNHV 202
G TC VGC P KL+ AA +G ++ + K+V R+
Sbjct: 43 GTTCARVGCXPSKLLIAAADASYHASQTDLFGIQVDRISVNGKAVXKRIQTERD------ 96
Query: 203 KSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPD 262
+ V +V + + D + KF+D+H T++ + + A+ I+IATG RPNYP+
Sbjct: 97 RFVGFVVESVESFDEQDKIRGFAKFLDEH----TLQVDDHSQVIAKRIVIATGSRPNYPE 152
Query: 263 -IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
+ A +++D++F L P V G G IG
Sbjct: 153 FLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIG 186
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
LGG C+NVGCIP K + A+ E K + G + NV ++A ++E + VK +
Sbjct: 37 LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTI---DFAKVQEWKASVVKKL 93
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEK-KTLTAENILIATGGRPNYPDIP 264
+L+ KV+ + F+D ++V NG+ +T T +N +IATG RP ++P
Sbjct: 94 TGGVEGLLKGNKVEIVKGEAYFVDANTVRVV--NGDSAQTYTFKNAIIATGSRP--IELP 149
Query: 265 GAK--EHCISSDDIFSLEKPPGKTLVVGAGYIG-KLETWDSNSGCGNVTI 311
K + S +L + P +V+G GYIG +L T +N G VTI
Sbjct: 150 NFKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGT-KVTI 198
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 196 EAVQNHVKSVNWVTRVMLRDKKVDYL-NALGKFIDQHSVEATM---KNGEKKTLTAENIL 251
E + K + + + L+ K V+ + NAL K ++ T+ NGE KT+ A+ +L
Sbjct: 204 EILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVL 263
Query: 252 IATGGRPNYPDI 263
+ G RPN ++
Sbjct: 264 VTVGRRPNTDEL 275
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTC+NVGCIP K L++ + L + +A G ++ ++ N AN ++A + VK
Sbjct: 40 LGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG--DIKINVANFQKAKDDAVKQ 97
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNG------EKKTLTAENILIATGGRP 258
+ ++ + KV Y G F D+ + T +G E L +NI++ATG
Sbjct: 98 LTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157
Query: 259 N-YPDIPGAKEHCISSDDIFSLEKPP 283
+P I +E +SS SL++ P
Sbjct: 158 TPFPGIEIDEEKIVSSTGALSLKEIP 183
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGG C+NVGCIP K L+H AA++ E ++ A G + P + + LR V
Sbjct: 41 LGGVCLNVGCIPSKALLHNAAVIDE-VRHLAANGIKYPE---PELDIDMLRAYKDGVVSR 96
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMK----------NGEKKTLTAENILIAT 254
+ M + +KVD + G+F+D H +E ++ GEKK + +N +IA
Sbjct: 97 LTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAA 156
Query: 255 GGR----PNYPDIPGAKEHCISSDDIFSLEKPPGK 285
G R P P+ P I S +L++ PGK
Sbjct: 157 GSRVTKLPFIPEDP----RIIDSSGALALKEVPGK 187
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGG C+NVGCIP K L+H AA++ E ++ A G + P + + LR V
Sbjct: 41 LGGVCLNVGCIPSKALLHNAAVIDE-VRHLAANGIKYPE---PELDIDMLRAYKDGVVSR 96
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMK----------NGEKKTLTAENILIAT 254
+ M + +KVD + G+F+D H +E ++ GEKK + +N +IA
Sbjct: 97 LTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAA 156
Query: 255 GGR----PNYPDIPGAKEHCISSDDIFSLEKPPGK 285
G R P P+ P I S +L++ PGK
Sbjct: 157 GSRVTKLPFIPEDP----RIIDSSGALALKEVPGK 187
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVK-SVQHNWANLREAVQNHVK 203
LGGTC+NVGCIP K L+ + EA + +G V V A + V+N
Sbjct: 44 LGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTG 103
Query: 204 SVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP-NYPD 262
V +++ V GK + VE T +G + L EN+++A+G +P P
Sbjct: 104 GVAS----LIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPP 159
Query: 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
P ++ + S + PGK V+GAG IG
Sbjct: 160 APVDQDVIVDSTGALDFQNVPGKLGVIGAGVIG 192
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHN-WANLREAVQNHVKS 204
+GGTCVNVGC+P K+M +AA + +++ G V ++ + ++A + ++
Sbjct: 38 IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRH 97
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIP 264
+ ++ + + ++ +F D S+ + G ++ + + L+ATG P P IP
Sbjct: 98 AKY-EGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIP 156
Query: 265 GAKEHCI-SSDDIFSLEKPPGKTLVVGAGYIG 295
G KE +S + + + P + V+G+ +
Sbjct: 157 GLKESPYWTSTEALASDTIPERLAVIGSSVVA 188
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 27/171 (15%)
Query: 135 VIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQ--HNWA 192
++ P+G LGG C+ GC+P K +++ + W + N+ +V+ +++
Sbjct: 31 LMADPKGE---LGGNCLYSGCVPSK----------TVREVIQTAWRLTNIANVKIPLDFS 77
Query: 193 NLREAVQNHVKSVNWVT--RVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAEN- 249
+++ +++V+ + + R M + + + + K D V +K E K + AE
Sbjct: 78 TVQDR-KDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHV--IVKTDEGKEIEAETR 134
Query: 250 -ILIATGGRPNYPDIPGAKEHCISSDDIF----SLEKPPGKTLVVGAGYIG 295
++IA+G +PG E+C++SDDIF S K P +++GAGYIG
Sbjct: 135 YMIIASGAETAKLRLPGV-EYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIG 184
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 229 DQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEHCIS 272
D++ V + K+G KK++ ++++A G RP P+ GA+E +S
Sbjct: 243 DEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPE--GAREIGLS 284
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 147 GGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
GG C+NVGCIP K L+ A L+ KDA A+G + R+ + V V
Sbjct: 40 GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGV 99
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPG 265
++ +++ K+ ++ G F D +++ + +G +++T +N +IATG +PG
Sbjct: 100 HF----LMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPG 153
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 147 GGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
GG C+NVGCIP K L+ A L+ KDA A+G + R+ + V V
Sbjct: 38 GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGV 97
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPG 265
++ + + K+ ++ G F D +++ + +G +++T +N +IATG +PG
Sbjct: 98 HF----LXKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPG 151
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 146 LGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
LGGTC+ VGCIP K L+ + EA K G VK V+ + L V++
Sbjct: 36 LGGTCLRVGCIPSKALLETTERIYEAKK-----GLLGAKVKGVELDLPALMAHKDKVVQA 90
Query: 205 VNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIP 264
+ + + +F+ + V + GE+ L A ILIATG P P P
Sbjct: 91 NTQGVEFLFKKNGIARHQGTARFLSERKV-LVEETGEE--LEARYILIATGSAPLIP--P 145
Query: 265 GAK---EHCISSDDIFSLEKPPGKTLVVGAGYIG 295
A+ E ++S + S + P + +VVG G IG
Sbjct: 146 WAQVDYERVVTSTEALSFPEVPKRLIVVGGGVIG 179
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 136 IPSPQGTTWGLGGTCVNVGCIPKK-LMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANL 194
IP+ LGGTC+N+GCIP K L+H A E A + P SV ++
Sbjct: 29 IPTVLVEGQALGGTCLNIGCIPSKALIHVA----EQFHQASRFTEPSPLGISVASPRLDI 84
Query: 195 REAVQNHVKSVNWVTR---VMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENIL 251
++V V+ +T +L+ V ++ K +D VE +G++ + E++L
Sbjct: 85 GQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEV---DGQR--IQCEHLL 139
Query: 252 IATGGRP-NYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
+ATG P +P ISS + + + P +VVG GYIG
Sbjct: 140 LATGSSSVELPMLPLGGP-VISSTEALAPKALPQHLVVVGGGYIG 183
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 146 LGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSV 205
+GG C+NVGCIP K + AA +K A +G + ++ R+ V VK +
Sbjct: 40 VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK-KLGGWRDQV---VKKL 95
Query: 206 NWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP-NYPDIP 264
+L+ V+ L + + VE GE+ A+++++ATG P P
Sbjct: 96 TGGVGTLLKGNGVELLRGFARLVGPKEVEV---GGER--YGAKSLILATGSEPLELKGFP 150
Query: 265 GAKEHCISSDDIFSLEKPPGKTLVVGAGYIG 295
++ S+ + E P + LV+G G +G
Sbjct: 151 FGEDVWDSTRALKVEEGLPKRLLVIGGGAVG 181
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
G+GG V C+P K + L ++ A G+ I + + + + V+ +
Sbjct: 38 GIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHI-DFDDAKISLPQIHARVKTLAAA 96
Query: 205 VNWVTRVMLRDKKVDYLNALGKFID------QHSVEATMKNGEKKTLTAENILIATGGRP 258
+ L V + G+ ID +H ++AT +G A+ +L+ATG P
Sbjct: 97 QSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156
Query: 259 NYPDIPGAK---EHCISSDDIFSLEKPPGKTLVVGAGYIG 295
+P A+ E ++ ++ L+ P +VVG+G G
Sbjct: 157 RI--LPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTG 194
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 12/152 (7%)
Query: 146 LGGTCVNVGCIPKKLMHQAA---LLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHV 202
LGG+C + C+P L A +L + V ++ R
Sbjct: 78 LGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIKEVVDLFRAGRNGPH 137
Query: 203 KSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPD 262
+N+ ++ L + + LN K ID H+VEA K A+N+++A G P D
Sbjct: 138 GIMNFQSKEQLNLEYI--LNCPAKVIDNHTVEAA-----GKVFKAKNLILAVGAGPGTLD 190
Query: 263 IPG--AKEHCISSDDIFSLEKPPGKTLVVGAG 292
+PG AK + + L+ PG T+VV G
Sbjct: 191 VPGVNAKGVFDHATLVEELDYEPGSTVVVVGG 222
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 241 EKKTLTAENILIATGGRPNYPDIPGAKEH----CISSDDIFSL--EKPPGKTL-VVGAGY 293
E+KT + +++ TG +P P IPG C + +D L E P KT+ ++G+GY
Sbjct: 100 EEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGY 159
Query: 294 IG 295
IG
Sbjct: 160 IG 161
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 24/82 (29%)
Query: 231 HSVE-ATMKNGEKKTLTAENILIATGGRPNYPDIPGAK----------------EHCISS 273
H+VE ++ GE++TL + +++A G + N P + G +H IS+
Sbjct: 97 HTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156
Query: 274 DDIFSLEKPPGKTLVVGAGYIG 295
++ K ++VG G+IG
Sbjct: 157 GEV-------SKAVIVGGGFIG 171
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 234 EATMKNGEKKTLTAENI-------------LIATGGRPNYPDIPGAKE--------HCIS 272
E N E+KT+T +N+ +++ G +P P IPG +E +
Sbjct: 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPD 174
Query: 273 SDDI--FSLEKPPGKTLVVGAGYIG 295
+D I + EK P V+G G+IG
Sbjct: 175 TDRIKAYIDEKKPRHATVIGGGFIG 199
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 23 LECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFL 68
LE AG L G++ ++ R G D++++ +I + + E GV F
Sbjct: 156 LELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFF 201
>pdb|2Q0K|A Chain A, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0K|B Chain B, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0L|A Chain A, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|2Q0L|B Chain B, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|3ISH|A Chain A, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|B Chain B, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|C Chain C, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
Length = 311
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 243 KTLTAENILIATGGRPNYPDIPGAKEH-------CISSDDIFSLEKPPGKTLVVGAG 292
KT A++++IATGG P I G E+ C + D F K + V+G G
Sbjct: 99 KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNK---EVAVLGGG 152
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 21/87 (24%)
Query: 229 DQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGA--KEHCI--------------- 271
D +V A + +G+ T + ++ ATG +P P I GA KE +
Sbjct: 121 DAKTVTA-LVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLY 179
Query: 272 --SSDDIFSLE-KPPGKTLVVGAGYIG 295
S+D I LE K + VVGAGYIG
Sbjct: 180 QNSADVIAKLENKDIKRVAVVGAGYIG 206
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 21/87 (24%)
Query: 229 DQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGA--KEHCI--------------- 271
D +V A + +G+ T + ++ ATG +P P I GA KE +
Sbjct: 121 DAKTVTA-LVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLY 179
Query: 272 --SSDDIFSLE-KPPGKTLVVGAGYIG 295
S+D I LE K + VVGAGYIG
Sbjct: 180 QNSADVIAKLENKDIKRVAVVGAGYIG 206
>pdb|1PS9|A Chain A, The Crystal Structure And Reaction Mechanism Of E. Coli
2,4- Dienoyl Coa Reductase
Length = 671
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 203 KSVNWVTRVMLRDKKVDYLNALG-KFIDQHSVEATMKNGEKKTLTAENILIATGGRPN 259
K+ W+ R L + V + + + ID + + NGE + L +N++I G PN
Sbjct: 573 KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVI-NGETQVLAVDNVVICAGQEPN 629
>pdb|1NUP|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complex With Nmn
pdb|1NUP|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complex With Nmn
pdb|1NUQ|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Naad
pdb|1NUQ|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Naad
pdb|1NUR|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE
pdb|1NUR|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE
pdb|1NUS|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog And Nmn
pdb|1NUS|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog And Nmn
pdb|1NUT|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog
pdb|1NUT|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog
pdb|1NUU|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Nad
pdb|1NUU|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Nad
Length = 252
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 167 LGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYL--NAL 224
+G D Y E P ++ QHN +E VQN + S ++ R + + + V YL +A+
Sbjct: 165 VGRVSHDPKGYIAESPILRMHQHNIHLAKEPVQNEI-SATYIRRALGQGQSVKYLIPDAV 223
Query: 225 GKFIDQHSV 233
+I H +
Sbjct: 224 ITYIKDHGL 232
>pdb|4FK1|A Chain A, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
pdb|4FK1|B Chain B, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
pdb|4FK1|C Chain C, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
pdb|4FK1|D Chain D, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
Length = 304
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 30/135 (22%)
Query: 150 CVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVT 209
C +G P L + + +LG A K + N N QN S ++T
Sbjct: 9 CAVIGAGPAGL-NASLVLGRARKQIALF-----------DNNTNRNRVTQN---SHGFIT 53
Query: 210 RVMLRDKKVDY--LNALGKFIDQHSVEATMKNGEKKT-------------LTAENILIAT 254
R ++ ++ LN + K+ H E T+ K++ AE +L+AT
Sbjct: 54 RDGIKPEEFKEIGLNEVXKYPSVHYYEKTVVXITKQSTGLFEIVTKDHTKYLAERVLLAT 113
Query: 255 GGRPNYPDIPGAKEH 269
G + +P IP +E+
Sbjct: 114 GXQEEFPSIPNVREY 128
>pdb|2DSJ|A Chain A, Crystal Structure Of Project Id Tt0128 From Thermus
Thermophilus Hb8
pdb|2DSJ|B Chain B, Crystal Structure Of Project Id Tt0128 From Thermus
Thermophilus Hb8
Length = 423
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 207 WVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATG 255
W+T M R KV L+ L +D+HS G+K +L IL A+G
Sbjct: 57 WLTETMARSGKVLDLSGLPHPVDKHSSGGV---GDKVSLVVGPILAASG 102
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 27.3 bits (59), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 145 GLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKS 204
L G V I ++ + +L + +++A GW + N K+ + WA + E H+ S
Sbjct: 289 ALEGDQQCVRDIARQYQQRRDVLVKGLREA---GWMVENPKASMYVWAKIPEPYA-HLGS 344
Query: 205 VNWVTRVMLRDKKVDYLNAL--GKFIDQHSVEATMKNGEK 242
+ + + +L+D KV + G + D H A ++N ++
Sbjct: 345 LEFAKK-LLQDAKVSVSPGIGFGDYGDDHVRFALIENRDR 383
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,413,741
Number of Sequences: 62578
Number of extensions: 368863
Number of successful extensions: 1180
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 919
Number of HSP's gapped (non-prelim): 144
length of query: 312
length of database: 14,973,337
effective HSP length: 99
effective length of query: 213
effective length of database: 8,778,115
effective search space: 1869738495
effective search space used: 1869738495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)