Query psy11185
Match_columns 312
No_of_seqs 229 out of 2240
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 20:17:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 99.9 2.4E-25 8.4E-30 209.2 16.2 209 100-311 39-251 (542)
2 3qfa_A Thioredoxin reductase 1 99.9 1.9E-24 6.4E-29 203.4 20.4 209 101-311 30-238 (519)
3 3dgz_A Thioredoxin reductase 2 99.9 4.6E-24 1.6E-28 199.4 19.6 209 101-311 4-213 (488)
4 3dgh_A TRXR-1, thioredoxin red 99.9 1.6E-23 5.5E-28 195.5 20.7 208 101-311 7-215 (483)
5 2x8g_A Thioredoxin glutathione 99.9 5.7E-23 2E-27 196.6 19.5 210 101-311 105-314 (598)
6 3dk9_A Grase, GR, glutathione 99.9 4.2E-21 1.4E-25 179.0 17.3 195 101-311 18-215 (478)
7 3l8k_A Dihydrolipoyl dehydroge 99.9 8.3E-21 2.8E-25 176.4 18.9 191 103-311 4-200 (466)
8 1zmd_A Dihydrolipoyl dehydroge 99.9 1.8E-20 6.2E-25 174.5 20.6 199 102-311 5-206 (474)
9 2r9z_A Glutathione amide reduc 99.9 1.2E-20 4E-25 175.2 18.2 191 103-311 4-194 (463)
10 1fec_A Trypanothione reductase 99.9 2E-20 6.8E-25 174.8 19.4 205 103-311 3-218 (490)
11 3lad_A Dihydrolipoamide dehydr 99.9 1.6E-20 5.5E-25 174.9 18.5 204 103-311 3-208 (476)
12 2wpf_A Trypanothione reductase 99.9 1.6E-20 5.4E-25 175.7 18.2 204 102-311 6-222 (495)
13 2hqm_A GR, grase, glutathione 99.9 8.2E-21 2.8E-25 177.0 16.2 200 102-311 10-213 (479)
14 2qae_A Lipoamide, dihydrolipoy 99.9 2.8E-20 9.6E-25 172.9 19.1 199 103-311 2-202 (468)
15 3urh_A Dihydrolipoyl dehydroge 99.8 3.7E-20 1.2E-24 173.2 19.6 197 102-311 24-226 (491)
16 1ebd_A E3BD, dihydrolipoamide 99.8 3.4E-20 1.2E-24 171.8 18.6 196 103-311 3-198 (455)
17 1ges_A Glutathione reductase; 99.8 1.3E-20 4.5E-25 174.2 15.7 191 103-311 4-195 (450)
18 1onf_A GR, grase, glutathione 99.8 2.4E-20 8.2E-25 174.7 17.5 192 103-311 2-204 (500)
19 3ic9_A Dihydrolipoamide dehydr 99.8 1.7E-20 5.7E-25 175.4 15.2 196 100-311 5-202 (492)
20 1dxl_A Dihydrolipoamide dehydr 99.8 4.9E-20 1.7E-24 171.4 18.2 199 102-311 5-205 (470)
21 1zk7_A HGII, reductase, mercur 99.8 6E-20 2.1E-24 170.6 18.6 197 103-311 4-204 (467)
22 2yqu_A 2-oxoglutarate dehydrog 99.8 3.1E-20 1.1E-24 172.0 16.6 193 104-311 2-195 (455)
23 4dna_A Probable glutathione re 99.8 3.5E-20 1.2E-24 172.0 16.9 194 102-311 4-198 (463)
24 3o0h_A Glutathione reductase; 99.8 8.6E-20 2.9E-24 170.3 18.8 194 102-311 25-219 (484)
25 2a8x_A Dihydrolipoyl dehydroge 99.8 1.1E-19 3.7E-24 168.8 17.9 196 103-311 3-199 (464)
26 2eq6_A Pyruvate dehydrogenase 99.8 1.2E-19 4.3E-24 168.3 17.9 190 103-311 6-197 (464)
27 1lvl_A Dihydrolipoamide dehydr 99.8 1.7E-19 5.7E-24 167.2 17.5 193 101-311 3-199 (458)
28 1ojt_A Surface protein; redox- 99.8 3.6E-19 1.2E-23 166.0 19.3 198 102-311 5-213 (482)
29 1xdi_A RV3303C-LPDA; reductase 99.8 3.8E-19 1.3E-23 166.6 17.0 199 103-311 2-210 (499)
30 1v59_A Dihydrolipoamide dehydr 99.8 6.4E-19 2.2E-23 164.2 17.2 197 103-311 5-211 (478)
31 4gcm_A TRXR, thioredoxin reduc 99.8 2.8E-19 9.7E-24 157.3 11.5 167 99-311 2-173 (312)
32 1mo9_A ORF3; nucleotide bindin 99.7 1.9E-17 6.5E-22 155.8 14.3 193 101-311 41-242 (523)
33 4a5l_A Thioredoxin reductase; 99.7 1.5E-17 5E-22 146.2 8.2 169 103-311 4-180 (314)
34 4b1b_A TRXR, thioredoxin reduc 99.7 4.9E-17 1.7E-21 152.8 10.4 166 19-203 232-403 (542)
35 3uox_A Otemo; baeyer-villiger 99.7 9.2E-16 3.1E-20 144.7 14.8 189 102-311 8-213 (545)
36 4fk1_A Putative thioredoxin re 99.6 9.3E-16 3.2E-20 134.4 12.1 164 101-311 4-175 (304)
37 2q7v_A Thioredoxin reductase; 99.6 4.3E-15 1.5E-19 131.2 15.9 165 102-311 7-180 (325)
38 4b63_A L-ornithine N5 monooxyg 99.6 1.2E-15 4.2E-20 142.6 12.5 197 103-311 39-276 (501)
39 3gwf_A Cyclohexanone monooxyge 99.6 8.3E-15 2.8E-19 138.0 17.7 183 102-311 7-206 (540)
40 3fbs_A Oxidoreductase; structu 99.6 6.1E-15 2.1E-19 128.2 15.5 160 103-311 2-168 (297)
41 2gv8_A Monooxygenase; FMO, FAD 99.6 7.6E-15 2.6E-19 135.5 16.8 194 103-312 6-242 (447)
42 1fl2_A Alkyl hydroperoxide red 99.6 5.3E-16 1.8E-20 136.0 8.6 162 103-311 1-172 (310)
43 2q0l_A TRXR, thioredoxin reduc 99.6 5.9E-15 2E-19 129.4 14.9 163 104-311 2-171 (311)
44 3f8d_A Thioredoxin reductase ( 99.6 8.2E-15 2.8E-19 128.8 14.8 162 103-311 15-182 (323)
45 2xve_A Flavin-containing monoo 99.6 1.3E-14 4.5E-19 134.4 16.0 80 232-311 137-225 (464)
46 3klj_A NAD(FAD)-dependent dehy 99.6 5.5E-16 1.9E-20 140.3 6.3 159 103-311 9-174 (385)
47 4ap3_A Steroid monooxygenase; 99.6 9.5E-15 3.2E-19 137.9 14.2 181 101-311 19-219 (549)
48 3itj_A Thioredoxin reductase 1 99.6 1.1E-14 3.8E-19 128.8 13.8 171 101-311 20-201 (338)
49 1hyu_A AHPF, alkyl hydroperoxi 99.6 3.5E-15 1.2E-19 140.3 9.3 163 102-311 211-383 (521)
50 4a9w_A Monooxygenase; baeyer-v 99.6 9.1E-14 3.1E-18 123.7 18.1 178 103-311 3-190 (357)
51 4eqs_A Coenzyme A disulfide re 99.6 1.5E-15 5.2E-20 139.7 6.7 143 20-175 157-308 (437)
52 2a87_A TRXR, TR, thioredoxin r 99.6 1.2E-14 4.3E-19 128.8 12.3 165 102-311 13-183 (335)
53 3r9u_A Thioredoxin reductase; 99.6 6.1E-14 2.1E-18 122.8 15.7 164 103-311 4-175 (315)
54 3cty_A Thioredoxin reductase; 99.6 8E-14 2.7E-18 122.7 15.8 163 102-311 15-183 (319)
55 1vdc_A NTR, NADPH dependent th 99.6 6.6E-14 2.3E-18 123.8 15.1 169 102-311 7-187 (333)
56 1xhc_A NADH oxidase /nitrite r 99.6 1.2E-15 4.2E-20 137.2 3.9 158 102-311 7-171 (367)
57 3s5w_A L-ornithine 5-monooxyge 99.5 6.9E-14 2.4E-18 129.5 14.5 189 103-311 30-257 (463)
58 1trb_A Thioredoxin reductase; 99.5 4.2E-14 1.4E-18 124.3 12.4 163 103-311 5-173 (320)
59 3dgh_A TRXR-1, thioredoxin red 99.5 2.3E-14 7.9E-19 133.5 11.0 149 20-175 197-349 (483)
60 1onf_A GR, grase, glutathione 99.5 2E-14 7E-19 134.4 10.7 123 20-150 186-314 (500)
61 1ges_A Glutathione reductase; 99.5 2.1E-14 7.3E-19 132.6 10.5 143 20-175 177-325 (450)
62 1ojt_A Surface protein; redox- 99.5 1.6E-14 5.4E-19 134.6 9.0 145 20-175 195-346 (482)
63 1w4x_A Phenylacetone monooxyge 99.5 1.1E-13 3.8E-18 130.7 14.8 185 102-311 15-214 (542)
64 2wpf_A Trypanothione reductase 99.5 2.1E-14 7.2E-19 134.2 9.6 143 20-175 201-352 (495)
65 2zbw_A Thioredoxin reductase; 99.5 2.9E-13 1E-17 119.8 16.5 167 103-311 5-180 (335)
66 4g6h_A Rotenone-insensitive NA 99.5 3.3E-14 1.1E-18 132.8 10.5 146 20-175 227-396 (502)
67 3dgz_A Thioredoxin reductase 2 99.5 4.5E-14 1.5E-18 131.8 11.3 149 20-175 195-349 (488)
68 2a8x_A Dihydrolipoyl dehydroge 99.5 4.4E-14 1.5E-18 131.0 10.7 144 20-175 181-331 (464)
69 1fec_A Trypanothione reductase 99.5 3E-14 1E-18 133.0 9.5 143 20-175 197-348 (490)
70 1xhc_A NADH oxidase /nitrite r 99.5 6.1E-14 2.1E-18 126.1 10.8 139 20-175 153-294 (367)
71 3kd9_A Coenzyme A disulfide re 99.5 5.7E-14 1.9E-18 129.7 10.6 160 104-311 4-176 (449)
72 2gqw_A Ferredoxin reductase; f 99.5 1.3E-14 4.3E-19 132.4 5.8 158 102-311 6-173 (408)
73 2v3a_A Rubredoxin reductase; a 99.5 1.9E-13 6.4E-18 123.6 13.3 145 20-175 155-303 (384)
74 2bc0_A NADH oxidase; flavoprot 99.5 2.8E-14 9.6E-19 133.2 7.9 162 103-311 35-222 (490)
75 3d1c_A Flavin-containing putat 99.5 4.2E-13 1.4E-17 120.3 15.3 173 103-311 4-194 (369)
76 2eq6_A Pyruvate dehydrogenase 99.5 7.9E-14 2.7E-18 129.3 10.6 144 20-175 179-331 (464)
77 3ef6_A Toluene 1,2-dioxygenase 99.5 2.1E-14 7.2E-19 131.0 6.5 159 104-311 3-171 (410)
78 2r9z_A Glutathione amide reduc 99.5 7.4E-14 2.5E-18 129.4 10.0 142 20-175 176-324 (463)
79 3lxd_A FAD-dependent pyridine 99.5 6.5E-14 2.2E-18 128.0 9.3 162 102-311 8-180 (415)
80 2qae_A Lipoamide, dihydrolipoy 99.5 1E-13 3.6E-18 128.6 10.7 145 20-175 184-337 (468)
81 3lzw_A Ferredoxin--NADP reduct 99.5 4.7E-13 1.6E-17 118.0 14.5 165 103-311 7-182 (332)
82 1zmd_A Dihydrolipoyl dehydroge 99.5 1.1E-13 3.7E-18 128.7 10.4 148 20-175 188-342 (474)
83 1v59_A Dihydrolipoamide dehydr 99.5 7E-14 2.4E-18 130.1 8.9 148 20-175 193-347 (478)
84 1mo9_A ORF3; nucleotide bindin 99.5 1.5E-13 5E-18 129.3 11.1 143 20-175 224-375 (523)
85 2hqm_A GR, grase, glutathione 99.5 6.2E-14 2.1E-18 130.5 8.4 144 20-175 195-344 (479)
86 3ab1_A Ferredoxin--NADP reduct 99.5 1.1E-12 3.9E-17 117.3 16.3 166 103-311 14-191 (360)
87 1q1r_A Putidaredoxin reductase 99.5 6E-14 2.1E-18 128.8 7.9 161 103-311 4-177 (431)
88 2gqw_A Ferredoxin reductase; f 99.5 3.8E-13 1.3E-17 122.6 13.1 142 20-175 155-305 (408)
89 3oc4_A Oxidoreductase, pyridin 99.5 3E-13 1E-17 124.9 12.6 161 104-311 3-175 (452)
90 3lxd_A FAD-dependent pyridine 99.5 4.6E-13 1.6E-17 122.4 13.3 147 20-175 162-318 (415)
91 3urh_A Dihydrolipoyl dehydroge 99.5 1.7E-13 5.8E-18 127.9 10.5 147 20-175 208-360 (491)
92 3qfa_A Thioredoxin reductase 1 99.5 1.5E-13 5E-18 129.2 9.9 149 20-175 220-377 (519)
93 2ywl_A Thioredoxin reductase r 99.5 6.9E-13 2.4E-17 106.9 12.6 140 20-174 11-165 (180)
94 3fg2_P Putative rubredoxin red 99.5 1.3E-13 4.5E-18 125.5 9.2 160 104-311 2-170 (404)
95 3dk9_A Grase, GR, glutathione 99.5 1.2E-13 4E-18 128.6 8.9 150 20-175 197-353 (478)
96 3cgb_A Pyridine nucleotide-dis 99.5 1.4E-13 4.7E-18 128.2 9.4 162 104-311 37-214 (480)
97 2cdu_A NADPH oxidase; flavoenz 99.5 2.2E-13 7.4E-18 125.9 10.6 164 104-311 1-177 (452)
98 3iwa_A FAD-dependent pyridine 99.5 1.2E-13 4.2E-18 128.2 9.0 169 104-311 4-188 (472)
99 1xdi_A RV3303C-LPDA; reductase 99.5 7.3E-14 2.5E-18 130.7 7.5 142 20-175 192-339 (499)
100 3ntd_A FAD-dependent pyridine 99.5 2.8E-13 9.7E-18 128.6 11.6 148 20-175 161-335 (565)
101 1nhp_A NADH peroxidase; oxidor 99.5 1.1E-13 3.8E-18 127.6 8.5 161 105-311 2-177 (447)
102 3iwa_A FAD-dependent pyridine 99.4 3.6E-13 1.2E-17 125.1 11.6 147 20-175 169-326 (472)
103 1ebd_A E3BD, dihydrolipoamide 99.4 1.3E-13 4.6E-18 127.4 8.6 145 20-175 180-330 (455)
104 3ef6_A Toluene 1,2-dioxygenase 99.4 2.7E-13 9.3E-18 123.7 10.5 146 20-175 153-306 (410)
105 2cdu_A NADPH oxidase; flavoenz 99.4 1.4E-13 4.8E-18 127.2 8.5 147 20-175 159-314 (452)
106 4dna_A Probable glutathione re 99.4 1.4E-13 4.8E-18 127.6 8.3 142 20-175 180-328 (463)
107 1q1r_A Putidaredoxin reductase 99.4 5.4E-13 1.8E-17 122.5 12.0 147 20-175 159-316 (431)
108 1dxl_A Dihydrolipoamide dehydr 99.4 9.7E-14 3.3E-18 128.9 6.8 147 20-175 187-339 (470)
109 2v3a_A Rubredoxin reductase; a 99.4 4.9E-14 1.7E-18 127.5 4.5 159 103-311 4-173 (384)
110 2bc0_A NADH oxidase; flavoprot 99.4 2.3E-13 7.9E-18 127.0 8.9 145 20-175 204-358 (490)
111 3fg2_P Putative rubredoxin red 99.4 9.3E-13 3.2E-17 119.9 12.5 147 20-175 152-307 (404)
112 3ntd_A FAD-dependent pyridine 99.4 2.6E-13 8.9E-18 128.8 9.0 162 105-311 3-179 (565)
113 3lad_A Dihydrolipoamide dehydr 99.4 2.5E-13 8.6E-18 126.3 8.4 145 20-175 190-340 (476)
114 3o0h_A Glutathione reductase; 99.4 5.5E-13 1.9E-17 124.3 10.2 142 20-175 201-348 (484)
115 4eqs_A Coenzyme A disulfide re 99.4 3E-13 1E-17 124.4 8.3 161 105-311 2-175 (437)
116 3oc4_A Oxidoreductase, pyridin 99.4 3.9E-13 1.3E-17 124.2 8.3 146 20-175 157-311 (452)
117 3ic9_A Dihydrolipoamide dehydr 99.4 5.2E-13 1.8E-17 124.6 8.6 143 20-175 184-335 (492)
118 2yqu_A 2-oxoglutarate dehydrog 99.4 5E-13 1.7E-17 123.6 7.8 142 20-175 177-324 (455)
119 3ics_A Coenzyme A-disulfide re 99.4 7.2E-13 2.5E-17 126.4 8.8 145 20-175 197-350 (588)
120 1zk7_A HGII, reductase, mercur 99.4 7.2E-13 2.4E-17 122.9 8.1 140 20-175 186-331 (467)
121 3ics_A Coenzyme A-disulfide re 99.4 1.3E-12 4.4E-17 124.6 9.4 164 103-311 36-215 (588)
122 1lvl_A Dihydrolipoamide dehydr 99.4 7.9E-13 2.7E-17 122.3 7.4 142 20-175 181-327 (458)
123 3kd9_A Coenzyme A disulfide re 99.4 2.2E-12 7.4E-17 119.1 10.3 145 20-175 158-312 (449)
124 1ps9_A 2,4-dienoyl-COA reducta 99.3 2.6E-12 8.9E-17 124.3 10.4 146 103-310 373-521 (671)
125 3l8k_A Dihydrolipoyl dehydroge 99.3 1.3E-12 4.5E-17 121.1 7.5 142 20-175 182-330 (466)
126 2x8g_A Thioredoxin glutathione 99.3 5E-12 1.7E-16 120.8 10.9 146 20-175 296-456 (598)
127 3klj_A NAD(FAD)-dependent dehy 99.3 9.7E-13 3.3E-17 118.9 5.6 132 20-175 156-291 (385)
128 1nhp_A NADH peroxidase; oxidor 99.3 3.5E-12 1.2E-16 117.6 9.3 146 20-175 159-313 (447)
129 3cgb_A Pyridine nucleotide-dis 99.3 3E-12 1E-16 119.1 8.4 146 20-175 196-350 (480)
130 2vdc_G Glutamate synthase [NAD 99.3 3.7E-12 1.3E-16 117.5 8.6 152 102-311 121-293 (456)
131 1lqt_A FPRA; NADP+ derivative, 99.3 1.2E-11 4E-16 114.3 10.4 145 103-304 3-168 (456)
132 1cjc_A Protein (adrenodoxin re 99.3 8.6E-12 2.9E-16 115.3 8.9 145 102-303 5-165 (460)
133 1trb_A Thioredoxin reductase; 99.3 2.7E-11 9.2E-16 106.3 11.6 128 20-152 155-290 (320)
134 1o94_A Tmadh, trimethylamine d 99.3 9E-12 3.1E-16 121.5 9.1 156 103-311 389-558 (729)
135 3sx6_A Sulfide-quinone reducta 99.3 3.4E-12 1.2E-16 117.3 5.5 149 104-302 5-174 (437)
136 4a5l_A Thioredoxin reductase; 99.3 2.1E-11 7.2E-16 106.7 10.3 126 20-153 162-289 (314)
137 2gag_A Heterotetrameric sarcos 99.3 2.9E-11 1E-15 121.2 12.4 163 102-311 127-312 (965)
138 4gcm_A TRXR, thioredoxin reduc 99.2 3.6E-11 1.2E-15 105.3 11.0 143 20-174 155-300 (312)
139 2zbw_A Thioredoxin reductase; 99.2 3.6E-11 1.2E-15 106.3 10.3 124 20-152 162-291 (335)
140 1m6i_A Programmed cell death p 99.2 5.6E-12 1.9E-16 117.7 4.0 88 215-304 102-201 (493)
141 1m6i_A Programmed cell death p 99.2 4.2E-11 1.4E-15 111.7 9.4 146 20-175 190-349 (493)
142 4g6h_A Rotenone-insensitive NA 99.2 3.6E-12 1.2E-16 119.0 1.8 155 104-304 43-238 (502)
143 3k30_A Histamine dehydrogenase 99.2 2.2E-11 7.4E-16 118.2 7.2 151 102-311 390-553 (690)
144 1gte_A Dihydropyrimidine dehyd 99.2 3.1E-11 1.1E-15 121.8 8.3 154 102-311 186-361 (1025)
145 3ab1_A Ferredoxin--NADP reduct 99.1 7.8E-11 2.7E-15 105.3 8.5 145 20-174 173-322 (360)
146 3lzw_A Ferredoxin--NADP reduct 99.1 1.1E-10 3.9E-15 102.6 9.2 123 20-151 164-288 (332)
147 1fl2_A Alkyl hydroperoxide red 99.1 2.2E-10 7.5E-15 100.0 10.9 125 20-152 154-281 (310)
148 3vrd_B FCCB subunit, flavocyto 99.1 5.1E-11 1.7E-15 108.2 6.8 146 19-175 166-319 (401)
149 3d1c_A Flavin-containing putat 99.1 1.3E-10 4.5E-15 103.9 9.4 125 20-153 176-313 (369)
150 3h8l_A NADH oxidase; membrane 99.1 1.6E-10 5.3E-15 105.2 9.7 139 20-174 184-330 (409)
151 3itj_A Thioredoxin reductase 1 99.1 1.9E-10 6.4E-15 101.5 9.6 123 20-151 183-310 (338)
152 2gqf_A Hypothetical protein HI 99.1 6.7E-11 2.3E-15 107.4 5.8 195 103-310 4-258 (401)
153 3f8d_A Thioredoxin reductase ( 99.1 3.8E-10 1.3E-14 98.8 10.3 143 20-173 164-310 (323)
154 3h8l_A NADH oxidase; membrane 99.1 1E-10 3.6E-15 106.4 6.8 140 105-292 3-154 (409)
155 3r9u_A Thioredoxin reductase; 99.1 3E-10 1E-14 99.1 9.1 140 20-173 157-305 (315)
156 3cty_A Thioredoxin reductase; 99.1 3.9E-10 1.3E-14 98.9 9.5 143 20-174 165-310 (319)
157 2q0l_A TRXR, thioredoxin reduc 99.1 4E-10 1.4E-14 98.4 9.2 143 20-174 153-303 (311)
158 1y56_A Hypothetical protein PH 99.0 5E-10 1.7E-14 104.4 9.2 148 102-297 107-264 (493)
159 2q7v_A Thioredoxin reductase; 99.0 1.2E-09 4.1E-14 96.1 11.1 142 20-174 162-306 (325)
160 1vdc_A NTR, NADPH dependent th 99.0 1E-09 3.6E-14 96.7 10.6 125 20-152 169-299 (333)
161 1hyu_A AHPF, alkyl hydroperoxi 99.0 9.1E-10 3.1E-14 103.4 10.3 124 20-152 365-492 (521)
162 2cul_A Glucose-inhibited divis 99.0 5E-09 1.7E-13 87.8 13.6 139 20-173 13-225 (232)
163 3sx6_A Sulfide-quinone reducta 99.0 1.1E-09 3.7E-14 100.6 9.7 144 23-175 168-339 (437)
164 3fbs_A Oxidoreductase; structu 99.0 5E-10 1.7E-14 96.9 6.1 129 20-173 151-285 (297)
165 3h28_A Sulfide-quinone reducta 99.0 1.4E-09 4.9E-14 99.5 9.1 143 23-175 161-328 (430)
166 2a87_A TRXR, TR, thioredoxin r 99.0 1.5E-09 5.2E-14 95.9 8.8 124 20-152 165-292 (335)
167 3hyw_A Sulfide-quinone reducta 99.0 1.6E-09 5.4E-14 99.3 9.1 133 34-175 180-328 (430)
168 3h28_A Sulfide-quinone reducta 99.0 7.9E-11 2.7E-15 108.0 0.2 149 104-302 3-167 (430)
169 1gte_A Dihydropyrimidine dehyd 98.9 5E-09 1.7E-13 105.7 10.9 127 20-152 342-485 (1025)
170 4fk1_A Putative thioredoxin re 98.9 2E-09 7E-14 93.8 7.0 116 20-151 157-275 (304)
171 2vdc_G Glutamate synthase [NAD 98.9 1.2E-09 4.2E-14 100.6 5.2 142 20-173 274-437 (456)
172 3ces_A MNMG, tRNA uridine 5-ca 98.9 2.6E-08 8.9E-13 94.6 14.3 174 103-310 28-217 (651)
173 3k30_A Histamine dehydrogenase 98.8 1.1E-08 3.8E-13 99.2 10.5 131 21-175 536-670 (690)
174 1o94_A Tmadh, trimethylamine d 98.8 8.7E-09 3E-13 100.5 9.7 140 20-175 540-695 (729)
175 3s5w_A L-ornithine 5-monooxyge 98.8 5.9E-09 2E-13 96.3 7.6 149 20-173 237-442 (463)
176 2gag_A Heterotetrameric sarcos 98.7 6.2E-08 2.1E-12 97.2 12.0 117 20-152 294-422 (965)
177 3hyw_A Sulfide-quinone reducta 98.7 4.6E-10 1.6E-14 102.9 -3.8 114 105-269 4-119 (430)
178 3vrd_B FCCB subunit, flavocyto 98.7 1.7E-08 5.9E-13 91.4 6.5 54 214-269 66-119 (401)
179 1cjc_A Protein (adrenodoxin re 98.6 5E-08 1.7E-12 90.0 7.7 89 63-152 270-371 (460)
180 1y0p_A Fumarate reductase flav 98.6 1.2E-07 4.2E-12 89.9 10.4 46 103-148 126-171 (571)
181 2zxi_A TRNA uridine 5-carboxym 98.6 3.1E-07 1.1E-11 86.9 13.0 149 102-268 26-190 (637)
182 1ps9_A 2,4-dienoyl-COA reducta 98.6 7.8E-07 2.7E-11 85.9 16.0 106 21-128 384-519 (671)
183 1lqt_A FPRA; NADP+ derivative, 98.6 6.4E-08 2.2E-12 89.2 7.1 127 20-152 157-363 (456)
184 2e5v_A L-aspartate oxidase; ar 98.6 6.5E-08 2.2E-12 89.6 7.1 44 105-149 1-44 (472)
185 3v76_A Flavoprotein; structura 98.6 2.7E-07 9.3E-12 84.0 10.6 146 101-258 25-187 (417)
186 1qo8_A Flavocytochrome C3 fuma 98.5 1.8E-07 6E-12 88.7 8.8 47 102-148 120-166 (566)
187 4a9w_A Monooxygenase; baeyer-v 98.5 7.1E-08 2.4E-12 85.3 5.5 115 20-149 173-323 (357)
188 2i0z_A NAD(FAD)-utilizing dehy 98.5 3.1E-07 1.1E-11 84.4 10.0 37 101-137 24-60 (447)
189 2h88_A Succinate dehydrogenase 98.5 7.5E-07 2.6E-11 85.0 12.5 49 101-149 16-64 (621)
190 3gwf_A Cyclohexanone monooxyge 98.5 3.9E-05 1.3E-09 72.1 23.2 116 21-136 19-211 (540)
191 3fpz_A Thiazole biosynthetic e 98.5 8.3E-09 2.8E-13 90.9 -1.8 143 101-311 63-211 (326)
192 1kf6_A Fumarate reductase flav 98.4 1.5E-06 5.1E-11 82.8 11.8 49 101-149 3-53 (602)
193 2xve_A Flavin-containing monoo 98.4 1.8E-05 6.2E-10 73.0 18.5 90 20-112 12-163 (464)
194 1chu_A Protein (L-aspartate ox 98.4 2E-06 6.9E-11 80.9 12.2 49 101-150 6-54 (540)
195 2ywl_A Thioredoxin reductase r 98.4 6.9E-07 2.4E-11 71.3 7.8 115 104-266 2-118 (180)
196 3dme_A Conserved exported prot 98.4 8.7E-06 3E-10 72.1 15.4 34 103-136 4-37 (369)
197 4at0_A 3-ketosteroid-delta4-5a 98.4 4.6E-06 1.6E-10 77.9 14.1 38 101-138 39-76 (510)
198 3cp8_A TRNA uridine 5-carboxym 98.4 3.6E-06 1.2E-10 80.0 13.0 148 101-267 19-183 (641)
199 1d4d_A Flavocytochrome C fumar 98.4 1E-06 3.5E-11 83.5 9.4 47 102-148 125-171 (572)
200 2cul_A Glucose-inhibited divis 98.4 1.6E-06 5.6E-11 72.3 9.5 126 103-266 3-133 (232)
201 2bs2_A Quinol-fumarate reducta 98.3 3E-06 1E-10 81.4 11.8 49 101-149 3-51 (660)
202 2wdq_A Succinate dehydrogenase 98.3 4.1E-06 1.4E-10 79.6 12.1 48 101-148 5-52 (588)
203 3nix_A Flavoprotein/dehydrogen 98.3 2.2E-06 7.6E-11 77.8 9.5 35 102-136 4-38 (421)
204 2gv8_A Monooxygenase; FMO, FAD 98.3 3.2E-05 1.1E-09 70.8 16.3 60 51-113 116-175 (447)
205 2bry_A NEDD9 interacting prote 98.2 4.9E-06 1.7E-10 77.5 10.7 138 101-264 90-236 (497)
206 3nlc_A Uncharacterized protein 98.2 2E-06 6.8E-11 80.7 7.1 36 101-136 105-140 (549)
207 1rp0_A ARA6, thiazole biosynth 98.2 3.2E-05 1.1E-09 66.5 14.1 36 102-137 38-74 (284)
208 1y56_B Sarcosine oxidase; dehy 98.1 7.4E-05 2.5E-09 66.7 15.8 35 102-136 4-38 (382)
209 3ps9_A TRNA 5-methylaminomethy 98.1 4.9E-05 1.7E-09 73.4 15.4 34 103-136 272-305 (676)
210 3gyx_A Adenylylsulfate reducta 98.1 2.1E-05 7.1E-10 75.6 12.5 46 101-147 20-71 (662)
211 3uox_A Otemo; baeyer-villiger 98.1 0.00036 1.2E-08 65.6 20.7 116 21-136 20-218 (545)
212 4ap3_A Steroid monooxygenase; 98.1 0.00054 1.8E-08 64.4 21.8 116 21-136 32-224 (549)
213 3alj_A 2-methyl-3-hydroxypyrid 98.1 2.9E-05 1E-09 69.4 12.4 35 103-137 11-45 (379)
214 1rp0_A ARA6, thiazole biosynth 98.1 7.9E-06 2.7E-10 70.3 7.6 94 20-113 49-189 (284)
215 3e1t_A Halogenase; flavoprotei 98.1 3.6E-05 1.2E-09 71.8 12.6 36 101-136 5-40 (512)
216 3atr_A Conserved archaeal prot 98.0 3.6E-05 1.2E-09 70.7 11.6 35 102-136 5-39 (453)
217 3pvc_A TRNA 5-methylaminomethy 98.0 0.00013 4.6E-09 70.5 15.9 35 102-136 263-297 (689)
218 3rp8_A Flavoprotein monooxygen 98.0 4.6E-05 1.6E-09 68.8 11.7 36 101-136 21-56 (407)
219 3dje_A Fructosyl amine: oxygen 98.0 6.8E-05 2.3E-09 68.3 12.9 36 102-137 5-41 (438)
220 3ihg_A RDME; flavoenzyme, anth 98.0 3.1E-05 1.1E-09 72.7 10.7 37 101-137 3-39 (535)
221 2gag_B Heterotetrameric sarcos 98.0 7.5E-05 2.6E-09 67.1 12.9 36 101-136 19-56 (405)
222 2uzz_A N-methyl-L-tryptophan o 98.0 0.00018 6.1E-09 63.9 14.7 35 103-137 2-36 (372)
223 3i3l_A Alkylhalidase CMLS; fla 97.9 0.00012 3.9E-09 69.6 13.8 35 102-136 22-56 (591)
224 2oln_A NIKD protein; flavoprot 97.9 0.00018 6E-09 64.6 13.9 35 103-137 4-38 (397)
225 3oz2_A Digeranylgeranylglycero 97.9 0.00013 4.5E-09 65.0 12.8 35 103-137 4-38 (397)
226 2x3n_A Probable FAD-dependent 97.9 7.3E-06 2.5E-10 73.9 4.5 35 102-136 5-39 (399)
227 3nyc_A D-arginine dehydrogenas 97.9 0.00019 6.4E-09 63.8 12.9 35 101-136 7-41 (381)
228 1k0i_A P-hydroxybenzoate hydro 97.9 2.7E-05 9.2E-10 70.0 7.4 34 103-136 2-35 (394)
229 1ryi_A Glycine oxidase; flavop 97.8 8.2E-05 2.8E-09 66.3 10.3 37 100-136 14-50 (382)
230 2gf3_A MSOX, monomeric sarcosi 97.8 0.00042 1.4E-08 61.8 14.8 34 103-136 3-36 (389)
231 3jsk_A Cypbp37 protein; octame 97.8 5.1E-05 1.7E-09 66.7 8.4 36 102-137 78-115 (344)
232 3c4n_A Uncharacterized protein 97.8 4E-05 1.4E-09 69.3 8.0 35 102-136 35-71 (405)
233 3cgv_A Geranylgeranyl reductas 97.8 0.00018 6.2E-09 64.4 11.8 35 103-137 4-38 (397)
234 2xdo_A TETX2 protein; tetracyc 97.8 0.00024 8.3E-09 63.9 12.5 36 102-137 25-60 (398)
235 3fmw_A Oxygenase; mithramycin, 97.8 2.2E-05 7.5E-10 74.3 5.5 36 102-137 48-83 (570)
236 1jnr_A Adenylylsulfate reducta 97.8 0.0005 1.7E-08 65.9 14.8 37 101-137 20-60 (643)
237 2vou_A 2,6-dihydroxypyridine h 97.8 0.0001 3.5E-09 66.4 9.5 36 102-137 4-39 (397)
238 2qa1_A PGAE, polyketide oxygen 97.7 6.9E-05 2.4E-09 69.7 7.3 38 100-137 8-45 (500)
239 2r0c_A REBC; flavin adenine di 97.7 0.00058 2E-08 64.2 13.4 37 101-137 24-60 (549)
240 2aqj_A Tryptophan halogenase, 97.6 0.00046 1.6E-08 64.7 12.4 34 103-136 5-41 (538)
241 2qa2_A CABE, polyketide oxygen 97.6 0.0004 1.4E-08 64.5 11.8 37 101-137 10-46 (499)
242 3nlc_A Uncharacterized protein 97.6 0.00023 7.7E-09 66.8 10.0 69 50-126 220-288 (549)
243 2qcu_A Aerobic glycerol-3-phos 97.6 0.0029 9.9E-08 58.7 17.5 34 103-136 3-36 (501)
244 3axb_A Putative oxidoreductase 97.6 0.0016 5.5E-08 59.3 15.4 33 102-134 22-55 (448)
245 2gjc_A Thiazole biosynthetic e 97.6 0.00071 2.4E-08 59.0 12.0 36 102-137 64-101 (326)
246 1yvv_A Amine oxidase, flavin-c 97.6 0.00089 3.1E-08 58.3 12.8 34 103-136 2-35 (336)
247 3c96_A Flavin-containing monoo 97.6 0.0011 3.8E-08 59.8 13.6 34 103-136 4-38 (410)
248 2gmh_A Electron transfer flavo 97.5 0.0009 3.1E-08 63.4 13.0 37 101-137 33-75 (584)
249 2pyx_A Tryptophan halogenase; 97.5 0.0014 4.9E-08 61.2 14.2 34 102-135 6-51 (526)
250 2bry_A NEDD9 interacting prote 97.5 0.00034 1.2E-08 64.9 9.1 89 21-113 103-228 (497)
251 2weu_A Tryptophan 5-halogenase 97.4 0.0013 4.6E-08 61.0 12.6 33 104-136 3-38 (511)
252 1pj5_A N,N-dimethylglycine oxi 97.4 0.003 1E-07 62.4 14.8 34 103-136 4-38 (830)
253 2dkh_A 3-hydroxybenzoate hydro 97.3 0.0013 4.4E-08 63.0 11.3 35 102-136 31-66 (639)
254 2e4g_A Tryptophan halogenase; 97.3 0.0029 1E-07 59.4 13.1 34 102-135 24-60 (550)
255 3qj4_A Renalase; FAD/NAD(P)-bi 97.3 0.00011 3.9E-09 64.6 3.1 33 104-136 2-37 (342)
256 3v76_A Flavoprotein; structura 97.3 0.00066 2.3E-08 61.5 8.2 83 21-113 38-185 (417)
257 3kkj_A Amine oxidase, flavin-c 97.3 0.00019 6.6E-09 59.9 4.4 34 103-136 2-35 (336)
258 3g5s_A Methylenetetrahydrofola 97.3 0.0017 5.7E-08 58.0 10.1 33 104-136 2-34 (443)
259 1y56_A Hypothetical protein PH 97.2 0.00039 1.3E-08 64.5 6.0 101 58-174 265-371 (493)
260 4hb9_A Similarities with proba 97.2 0.0025 8.5E-08 57.0 11.1 32 105-136 3-34 (412)
261 3da1_A Glycerol-3-phosphate de 97.2 0.0019 6.6E-08 60.8 10.5 34 102-135 17-50 (561)
262 3alj_A 2-methyl-3-hydroxypyrid 97.2 0.0012 4E-08 58.9 8.4 83 21-115 22-160 (379)
263 2gqf_A Hypothetical protein HI 97.0 0.0021 7E-08 58.0 8.8 85 20-113 14-166 (401)
264 2rgh_A Alpha-glycerophosphate 97.0 0.027 9.1E-07 53.1 16.1 35 102-136 31-65 (571)
265 1pn0_A Phenol 2-monooxygenase; 96.9 0.00069 2.4E-08 65.2 5.2 35 102-136 7-46 (665)
266 2x3n_A Probable FAD-dependent 96.9 0.0028 9.5E-08 56.8 8.6 88 20-116 16-167 (399)
267 2i0z_A NAD(FAD)-utilizing dehy 96.9 0.0036 1.2E-07 57.2 9.3 58 50-115 134-191 (447)
268 3ces_A MNMG, tRNA uridine 5-ca 96.8 0.0057 1.9E-07 58.2 9.7 104 21-133 39-220 (651)
269 1yvv_A Amine oxidase, flavin-c 96.6 0.006 2E-07 53.0 8.4 41 64-113 119-160 (336)
270 3k7m_X 6-hydroxy-L-nicotine ox 96.6 0.0013 4.5E-08 59.5 4.3 90 49-149 203-305 (431)
271 1k0i_A P-hydroxybenzoate hydro 96.6 0.0045 1.5E-07 55.3 7.2 88 20-113 12-161 (394)
272 1y0p_A Fumarate reductase flav 96.5 0.011 3.8E-07 55.7 9.5 59 51-113 256-315 (571)
273 2zxi_A TRNA uridine 5-carboxym 96.4 0.022 7.5E-07 54.0 11.1 100 21-129 38-215 (637)
274 4gde_A UDP-galactopyranose mut 96.4 0.0019 6.5E-08 59.8 3.8 37 101-137 8-45 (513)
275 2vou_A 2,6-dihydroxypyridine h 96.3 0.0066 2.3E-07 54.3 6.9 85 20-115 15-153 (397)
276 2gag_B Heterotetrameric sarcos 96.3 0.014 4.9E-07 52.0 9.0 55 52-115 176-230 (405)
277 1qo8_A Flavocytochrome C3 fuma 96.3 0.011 3.9E-07 55.6 8.5 58 52-113 252-310 (566)
278 3nix_A Flavoprotein/dehydrogen 96.3 0.014 4.7E-07 52.5 8.6 91 20-115 15-166 (421)
279 1d4d_A Flavocytochrome C fumar 96.2 0.02 6.9E-07 54.0 9.8 59 51-113 256-315 (572)
280 1y56_B Sarcosine oxidase; dehy 96.2 0.027 9.4E-07 49.8 10.2 57 53-119 152-209 (382)
281 1ryi_A Glycine oxidase; flavop 96.1 0.017 5.7E-07 51.2 8.3 58 51-118 165-222 (382)
282 3ihg_A RDME; flavoenzyme, anth 96.1 0.019 6.6E-07 53.5 9.0 61 50-115 120-183 (535)
283 3atr_A Conserved archaeal prot 96.1 0.02 6.9E-07 52.2 8.8 92 20-114 16-161 (453)
284 3k7m_X 6-hydroxy-L-nicotine ox 96.0 0.005 1.7E-07 55.7 4.5 33 104-136 2-34 (431)
285 2uzz_A N-methyl-L-tryptophan o 96.0 0.02 6.9E-07 50.4 8.4 54 51-114 150-203 (372)
286 4gut_A Lysine-specific histone 96.0 0.1 3.5E-06 50.9 13.7 35 102-136 335-369 (776)
287 3i3l_A Alkylhalidase CMLS; fla 95.9 0.026 8.8E-07 53.4 8.9 61 50-116 128-189 (591)
288 2bcg_G Secretory pathway GDP d 95.9 0.007 2.4E-07 55.3 4.7 36 102-137 10-45 (453)
289 3cgv_A Geranylgeranyl reductas 95.7 0.037 1.3E-06 49.1 8.9 90 20-115 14-162 (397)
290 3qj4_A Renalase; FAD/NAD(P)-bi 95.7 0.02 6.9E-07 49.9 6.7 42 63-113 122-163 (342)
291 3rp8_A Flavoprotein monooxygen 95.6 0.024 8.1E-07 50.8 7.3 52 51-113 128-179 (407)
292 1w4x_A Phenylacetone monooxyge 95.6 0.029 9.8E-07 52.5 7.9 85 21-113 27-152 (542)
293 2xdo_A TETX2 protein; tetracyc 95.6 0.037 1.3E-06 49.4 8.3 40 65-113 141-180 (398)
294 4dgk_A Phytoene dehydrogenase; 95.4 0.0077 2.6E-07 55.6 3.4 33 105-137 3-35 (501)
295 1c0p_A D-amino acid oxidase; a 95.4 0.014 4.8E-07 51.4 4.8 35 102-136 5-39 (363)
296 2qa1_A PGAE, polyketide oxygen 95.4 0.074 2.5E-06 49.2 9.8 89 21-115 22-165 (500)
297 2qa2_A CABE, polyketide oxygen 95.4 0.071 2.4E-06 49.3 9.5 88 21-114 23-165 (499)
298 2yg5_A Putrescine oxidase; oxi 95.3 0.012 4.2E-07 53.4 4.3 35 102-136 4-38 (453)
299 3fmw_A Oxygenase; mithramycin, 95.3 0.03 1E-06 52.7 6.9 89 21-115 60-207 (570)
300 3cp8_A TRNA uridine 5-carboxym 95.2 0.04 1.4E-06 52.3 7.5 82 21-112 32-171 (641)
301 3t37_A Probable dehydrogenase; 95.2 0.012 4.1E-07 54.7 3.9 35 103-137 17-52 (526)
302 2gmh_A Electron transfer flavo 95.2 0.11 3.9E-06 48.9 10.5 66 51-116 145-218 (584)
303 3ihm_A Styrene monooxygenase A 95.2 0.01 3.6E-07 53.8 3.3 36 101-136 20-55 (430)
304 1rsg_A FMS1 protein; FAD bindi 95.2 0.013 4.5E-07 54.4 4.1 36 102-137 7-43 (516)
305 3oz2_A Digeranylgeranylglycero 95.2 0.054 1.9E-06 47.7 8.0 91 20-115 14-162 (397)
306 3c96_A Flavin-containing monoo 95.1 0.062 2.1E-06 48.2 8.2 60 51-115 108-169 (410)
307 3hdq_A UDP-galactopyranose mut 95.1 0.02 6.8E-07 51.4 4.8 36 101-136 27-62 (397)
308 3e1t_A Halogenase; flavoprotei 95.1 0.078 2.7E-06 49.1 9.0 60 51-114 112-171 (512)
309 3nrn_A Uncharacterized protein 95.1 0.017 5.8E-07 52.0 4.3 32 105-136 2-33 (421)
310 1s3e_A Amine oxidase [flavin-c 95.0 0.019 6.5E-07 53.3 4.5 35 103-137 4-38 (520)
311 2b9w_A Putative aminooxidase; 95.0 0.022 7.6E-07 51.2 4.8 34 103-136 6-40 (424)
312 2ivd_A PPO, PPOX, protoporphyr 94.9 0.019 6.6E-07 52.5 4.2 37 101-137 14-50 (478)
313 1v0j_A UDP-galactopyranose mut 94.8 0.021 7.1E-07 51.2 4.2 34 103-136 7-41 (399)
314 3ka7_A Oxidoreductase; structu 94.7 0.021 7.1E-07 51.4 3.8 33 105-137 2-34 (425)
315 1i8t_A UDP-galactopyranose mut 94.6 0.025 8.7E-07 50.1 4.1 33 104-136 2-34 (367)
316 4dgk_A Phytoene dehydrogenase; 94.6 0.043 1.5E-06 50.5 5.8 58 49-114 220-277 (501)
317 3c4a_A Probable tryptophan hyd 94.6 0.02 6.7E-07 50.9 3.3 33 105-137 2-36 (381)
318 3dme_A Conserved exported prot 94.5 0.073 2.5E-06 46.4 7.0 64 50-119 150-213 (369)
319 2vvm_A Monoamine oxidase N; FA 94.5 0.026 8.7E-07 52.0 4.1 35 103-137 39-73 (495)
320 2jae_A L-amino acid oxidase; o 94.3 0.031 1.1E-06 51.4 4.1 36 102-137 10-45 (489)
321 3i6d_A Protoporphyrinogen oxid 94.2 0.019 6.4E-07 52.3 2.5 34 103-136 5-44 (470)
322 3jsk_A Cypbp37 protein; octame 94.2 0.28 9.7E-06 42.8 9.7 60 21-80 90-191 (344)
323 1d5t_A Guanine nucleotide diss 94.2 0.048 1.7E-06 49.4 5.1 35 102-136 5-39 (433)
324 2e1m_A L-glutamate oxidase; L- 94.1 0.037 1.3E-06 49.2 4.1 34 102-135 43-76 (376)
325 3g3e_A D-amino-acid oxidase; F 94.0 0.023 7.8E-07 49.8 2.5 32 105-136 2-39 (351)
326 3p1w_A Rabgdi protein; GDI RAB 94.0 0.046 1.6E-06 50.2 4.4 35 102-136 19-53 (475)
327 3pl8_A Pyranose 2-oxidase; sub 93.8 0.045 1.5E-06 52.1 4.3 35 102-136 45-79 (623)
328 2gjc_A Thiazole biosynthetic e 93.7 0.38 1.3E-05 41.7 9.5 59 21-79 76-176 (326)
329 1ju2_A HydroxynitrIle lyase; f 93.6 0.037 1.3E-06 51.7 3.3 34 102-136 25-58 (536)
330 3nks_A Protoporphyrinogen oxid 93.6 0.041 1.4E-06 50.3 3.5 33 104-136 3-37 (477)
331 2e5v_A L-aspartate oxidase; ar 93.5 0.24 8.2E-06 45.4 8.5 55 51-113 120-174 (472)
332 4hb9_A Similarities with proba 93.5 0.21 7.3E-06 44.2 7.9 42 65-114 124-165 (412)
333 1sez_A Protoporphyrinogen oxid 93.4 0.052 1.8E-06 50.0 3.9 35 103-137 13-47 (504)
334 3c4n_A Uncharacterized protein 93.4 0.13 4.5E-06 45.9 6.4 57 52-118 174-239 (405)
335 1kdg_A CDH, cellobiose dehydro 93.1 0.059 2E-06 50.4 3.8 35 102-136 6-40 (546)
336 2bi7_A UDP-galactopyranose mut 93.1 0.077 2.6E-06 47.2 4.3 33 104-136 4-36 (384)
337 2iid_A L-amino-acid oxidase; f 93.0 0.063 2.2E-06 49.4 3.8 35 102-136 32-66 (498)
338 4dsg_A UDP-galactopyranose mut 93.0 0.086 2.9E-06 48.5 4.6 35 102-136 8-43 (484)
339 3q9t_A Choline dehydrogenase a 92.9 0.049 1.7E-06 51.3 2.9 36 102-137 5-41 (577)
340 3lov_A Protoporphyrinogen oxid 92.9 0.057 2E-06 49.3 3.3 34 103-136 4-39 (475)
341 3c4a_A Probable tryptophan hyd 92.6 0.085 2.9E-06 46.7 4.0 75 20-114 10-142 (381)
342 3dje_A Fructosyl amine: oxygen 92.6 0.17 5.6E-06 45.7 5.9 56 50-114 161-220 (438)
343 3qvp_A Glucose oxidase; oxidor 92.4 0.067 2.3E-06 50.4 3.0 35 102-136 18-53 (583)
344 1b37_A Protein (polyamine oxid 92.2 0.12 4E-06 47.3 4.4 34 103-136 4-38 (472)
345 2vvm_A Monoamine oxidase N; FA 91.9 0.28 9.4E-06 45.0 6.6 56 49-113 254-310 (495)
346 3fim_B ARYL-alcohol oxidase; A 91.9 0.075 2.6E-06 49.9 2.8 34 103-136 2-36 (566)
347 3ka7_A Oxidoreductase; structu 91.5 0.27 9.3E-06 43.9 5.9 55 49-113 195-250 (425)
348 3nyc_A D-arginine dehydrogenas 91.2 0.34 1.2E-05 42.4 6.2 61 50-120 154-214 (381)
349 3pvc_A TRNA 5-methylaminomethy 90.9 0.41 1.4E-05 46.0 6.9 56 50-114 412-468 (689)
350 2r0c_A REBC; flavin adenine di 90.8 0.69 2.4E-05 43.1 8.1 56 52-114 140-195 (549)
351 2gf3_A MSOX, monomeric sarcosi 90.5 0.38 1.3E-05 42.3 5.8 56 50-115 150-205 (389)
352 3nrn_A Uncharacterized protein 90.4 0.27 9.3E-06 44.0 4.9 55 49-114 188-242 (421)
353 1kf6_A Fumarate reductase flav 90.4 1.3 4.3E-05 41.9 9.6 60 51-113 135-195 (602)
354 3ps9_A TRNA 5-methylaminomethy 90.3 0.36 1.2E-05 46.3 5.9 56 50-114 417-472 (676)
355 3dfz_A SIRC, precorrin-2 dehyd 90.2 0.26 8.8E-06 40.3 4.0 31 281-311 29-59 (223)
356 1n4w_A CHOD, cholesterol oxida 90.1 0.19 6.7E-06 46.4 3.7 34 103-136 5-38 (504)
357 1coy_A Cholesterol oxidase; ox 89.8 0.21 7.1E-06 46.2 3.6 36 101-136 9-44 (507)
358 2e1m_A L-glutamate oxidase; L- 89.6 0.33 1.1E-05 43.0 4.6 30 282-311 43-72 (376)
359 2z3y_A Lysine-specific histone 89.5 0.24 8.3E-06 47.4 3.9 35 102-136 106-140 (662)
360 2iid_A L-amino-acid oxidase; f 89.4 0.23 7.8E-06 45.6 3.6 30 282-311 32-61 (498)
361 3eag_A UDP-N-acetylmuramate:L- 89.3 0.9 3.1E-05 39.3 7.1 42 20-70 14-56 (326)
362 1gpe_A Protein (glucose oxidas 89.1 0.27 9.1E-06 46.4 3.8 35 102-136 23-58 (587)
363 3p1w_A Rabgdi protein; GDI RAB 88.8 0.5 1.7E-05 43.2 5.3 57 50-114 256-313 (475)
364 3da1_A Glycerol-3-phosphate de 88.7 0.73 2.5E-05 43.1 6.5 65 50-117 170-234 (561)
365 2xag_A Lysine-specific histone 88.6 0.32 1.1E-05 48.0 4.1 35 102-136 277-311 (852)
366 4at0_A 3-ketosteroid-delta4-5a 88.5 0.92 3.1E-05 41.8 7.0 58 51-113 203-262 (510)
367 2jbv_A Choline oxidase; alcoho 88.2 0.29 1E-05 45.7 3.4 35 102-136 12-47 (546)
368 3axb_A Putative oxidoreductase 88.0 0.85 2.9E-05 41.1 6.3 57 50-115 181-254 (448)
369 2oln_A NIKD protein; flavoprot 86.5 1 3.5E-05 39.7 5.8 54 51-114 154-207 (397)
370 3lk7_A UDP-N-acetylmuramoylala 86.5 1.3 4.4E-05 40.2 6.6 46 20-72 19-64 (451)
371 3nks_A Protoporphyrinogen oxid 85.6 0.89 3E-05 41.2 5.1 54 51-113 235-288 (477)
372 1pj5_A N,N-dimethylglycine oxi 85.1 1.5 5.1E-05 43.1 6.7 59 50-117 151-209 (830)
373 2rgh_A Alpha-glycerophosphate 84.7 1.4 4.9E-05 41.2 6.1 64 49-115 187-250 (571)
374 2e4g_A Tryptophan halogenase; 84.6 1.5 5.2E-05 40.8 6.2 55 51-114 195-251 (550)
375 2weu_A Tryptophan 5-halogenase 84.4 1.9 6.3E-05 39.6 6.7 56 50-114 173-229 (511)
376 2qcu_A Aerobic glycerol-3-phos 84.3 1.7 5.8E-05 39.9 6.4 67 49-119 148-214 (501)
377 3fpz_A Thiazole biosynthetic e 84.2 0.53 1.8E-05 40.6 2.7 27 285-311 67-95 (326)
378 2aqj_A Tryptophan halogenase, 83.4 2.1 7E-05 39.7 6.6 56 50-114 165-221 (538)
379 2bcg_G Secretory pathway GDP d 83.2 1.6 5.4E-05 39.6 5.6 56 50-114 242-299 (453)
380 3fwz_A Inner membrane protein 83.2 1.5 5.2E-05 32.4 4.7 36 101-136 5-40 (140)
381 2z3y_A Lysine-specific histone 83.2 0.88 3E-05 43.5 4.1 30 282-311 106-135 (662)
382 1d5t_A Guanine nucleotide diss 83.1 0.97 3.3E-05 40.7 4.1 56 50-114 234-289 (433)
383 1vg0_A RAB proteins geranylger 82.6 1.1 3.6E-05 42.7 4.2 33 103-135 8-40 (650)
384 2wdq_A Succinate dehydrogenase 82.0 3.1 0.00011 39.1 7.3 61 50-113 143-204 (588)
385 2xag_A Lysine-specific histone 81.5 1.1 3.7E-05 44.2 4.1 30 282-311 277-306 (852)
386 3ayj_A Pro-enzyme of L-phenyla 79.7 0.69 2.4E-05 44.6 1.9 34 103-136 56-97 (721)
387 2g1u_A Hypothetical protein TM 79.0 1.8 6.1E-05 32.7 3.8 32 104-135 20-51 (155)
388 3i6d_A Protoporphyrinogen oxid 78.4 3 0.0001 37.4 5.7 52 51-113 236-287 (470)
389 2dkh_A 3-hydroxybenzoate hydro 78.3 1.5 5E-05 41.8 3.7 28 284-311 33-61 (639)
390 2pyx_A Tryptophan halogenase; 78.0 4.2 0.00014 37.5 6.7 55 50-113 175-231 (526)
391 4gde_A UDP-galactopyranose mut 77.7 1.8 6E-05 39.6 4.0 53 49-112 221-273 (513)
392 3llv_A Exopolyphosphatase-rela 77.7 2.3 8E-05 31.3 4.0 31 105-135 8-38 (141)
393 2h88_A Succinate dehydrogenase 77.7 4.5 0.00016 38.3 6.9 60 50-113 155-215 (621)
394 1b37_A Protein (polyamine oxid 77.5 2.1 7.2E-05 38.8 4.4 54 51-113 207-268 (472)
395 3kkj_A Amine oxidase, flavin-c 76.6 1.3 4.4E-05 35.9 2.5 23 20-42 12-34 (336)
396 4gut_A Lysine-specific histone 75.9 1.6 5.6E-05 42.5 3.3 29 283-311 336-364 (776)
397 3oj0_A Glutr, glutamyl-tRNA re 75.8 1.9 6.5E-05 32.0 3.1 29 283-311 21-49 (144)
398 3ayj_A Pro-enzyme of L-phenyla 75.6 1.2 4E-05 43.0 2.2 29 283-311 56-92 (721)
399 1s3e_A Amine oxidase [flavin-c 75.4 2.1 7.3E-05 39.3 3.9 42 63-113 225-266 (520)
400 1lss_A TRK system potassium up 74.5 2.9 9.9E-05 30.4 3.8 30 105-134 6-35 (140)
401 4hv4_A UDP-N-acetylmuramate--L 74.3 8.5 0.00029 35.2 7.6 40 21-70 33-73 (494)
402 2bs2_A Quinol-fumarate reducta 74.0 6.3 0.00021 37.6 6.8 60 50-113 158-218 (660)
403 1id1_A Putative potassium chan 73.6 3.1 0.00011 31.1 3.8 31 105-135 5-35 (153)
404 3hn7_A UDP-N-acetylmuramate-L- 73.2 5.9 0.0002 36.6 6.3 41 21-70 30-71 (524)
405 4b63_A L-ornithine N5 monooxyg 72.3 5.3 0.00018 36.6 5.7 61 50-113 145-212 (501)
406 3c85_A Putative glutathione-re 71.9 2.9 9.9E-05 32.4 3.4 30 282-311 38-68 (183)
407 4fn4_A Short chain dehydrogena 71.5 4.1 0.00014 33.7 4.4 47 14-67 4-58 (254)
408 3pl8_A Pyranose 2-oxidase; sub 71.2 2.5 8.6E-05 40.0 3.3 27 285-311 48-74 (623)
409 3c85_A Putative glutathione-re 70.2 3.4 0.00012 31.9 3.4 32 104-135 40-72 (183)
410 4g81_D Putative hexonate dehyd 66.7 5.2 0.00018 33.2 3.9 47 14-67 6-60 (255)
411 2hmt_A YUAA protein; RCK, KTN, 66.2 5 0.00017 29.2 3.5 30 105-134 8-37 (144)
412 3ic5_A Putative saccharopine d 65.9 5.1 0.00017 28.0 3.4 31 104-134 6-37 (118)
413 1chu_A Protein (L-aspartate ox 65.9 5.9 0.0002 36.7 4.6 56 55-113 143-206 (540)
414 3l4b_C TRKA K+ channel protien 65.3 4.6 0.00016 32.2 3.4 32 105-136 2-33 (218)
415 2g1u_A Hypothetical protein TM 64.9 3.9 0.00013 30.7 2.7 38 5-42 8-51 (155)
416 1kyq_A Met8P, siroheme biosynt 64.8 5 0.00017 33.7 3.5 32 104-135 14-45 (274)
417 2ivd_A PPO, PPOX, protoporphyr 63.6 6.1 0.00021 35.6 4.2 52 51-114 239-293 (478)
418 3p2y_A Alanine dehydrogenase/p 63.6 5.2 0.00018 35.3 3.5 30 282-311 183-212 (381)
419 1edz_A 5,10-methylenetetrahydr 63.5 5.9 0.0002 34.0 3.8 32 280-311 174-206 (320)
420 3phh_A Shikimate dehydrogenase 63.1 6.3 0.00021 33.0 3.8 29 283-311 118-146 (269)
421 1jw9_B Molybdopterin biosynthe 62.7 5.1 0.00018 33.0 3.2 30 282-311 30-60 (249)
422 4dio_A NAD(P) transhydrogenase 62.7 6.4 0.00022 35.0 4.0 30 282-311 189-218 (405)
423 1nyt_A Shikimate 5-dehydrogena 62.3 6.7 0.00023 32.7 3.9 31 281-311 117-147 (271)
424 3dfz_A SIRC, precorrin-2 dehyd 61.9 6.3 0.00021 32.0 3.5 31 104-134 32-62 (223)
425 4dio_A NAD(P) transhydrogenase 61.5 6.9 0.00024 34.8 3.9 33 103-135 190-222 (405)
426 1b0a_A Protein (fold bifunctio 61.1 7.5 0.00026 32.8 3.9 32 280-311 156-188 (288)
427 1x13_A NAD(P) transhydrogenase 60.8 7.1 0.00024 34.7 4.0 30 282-311 171-200 (401)
428 1rsg_A FMS1 protein; FAD bindi 60.6 5.4 0.00018 36.6 3.3 44 65-116 215-258 (516)
429 1pjc_A Protein (L-alanine dehy 60.2 7.5 0.00026 33.9 4.0 30 282-311 166-195 (361)
430 4e4t_A Phosphoribosylaminoimid 59.7 7.8 0.00027 34.6 4.1 30 281-310 33-62 (419)
431 2b9w_A Putative aminooxidase; 59.4 8.2 0.00028 34.1 4.2 42 62-113 215-256 (424)
432 1l7d_A Nicotinamide nucleotide 59.1 7.9 0.00027 34.1 4.0 30 282-311 171-200 (384)
433 2eez_A Alanine dehydrogenase; 58.8 8.1 0.00028 33.8 4.0 30 282-311 165-194 (369)
434 1vg0_A RAB proteins geranylger 58.5 16 0.00056 34.6 6.2 56 49-112 377-434 (650)
435 2yg5_A Putrescine oxidase; oxi 58.5 5.7 0.0002 35.5 3.0 43 62-113 224-266 (453)
436 2vhw_A Alanine dehydrogenase; 57.8 8.6 0.0003 33.8 4.0 30 282-311 167-196 (377)
437 2c2x_A Methylenetetrahydrofola 57.3 11 0.00039 31.6 4.4 32 280-311 155-189 (281)
438 1leh_A Leucine dehydrogenase; 56.9 8.9 0.00031 33.6 3.8 31 281-311 171-201 (364)
439 1a4i_A Methylenetetrahydrofola 56.7 11 0.00036 32.1 4.1 32 280-311 162-194 (301)
440 3lov_A Protoporphyrinogen oxid 56.4 10 0.00035 34.1 4.3 51 51-113 237-287 (475)
441 3lk7_A UDP-N-acetylmuramoylala 56.3 10 0.00034 34.2 4.2 32 104-135 10-41 (451)
442 2egg_A AROE, shikimate 5-dehyd 56.3 11 0.00037 31.9 4.2 31 281-311 139-170 (297)
443 3tum_A Shikimate dehydrogenase 56.1 13 0.00045 31.0 4.6 31 281-311 123-154 (269)
444 3dlo_A Universal stress protei 55.8 13 0.00043 27.8 4.1 26 16-41 35-61 (155)
445 1p77_A Shikimate 5-dehydrogena 55.6 7 0.00024 32.6 2.9 31 281-311 117-147 (272)
446 2a9f_A Putative malic enzyme ( 55.0 8.4 0.00029 34.1 3.3 34 102-135 187-221 (398)
447 1nvt_A Shikimate 5'-dehydrogen 55.0 13 0.00046 31.1 4.6 29 282-311 127-155 (287)
448 3d4o_A Dipicolinate synthase s 54.9 11 0.00036 31.8 3.9 30 282-311 154-183 (293)
449 3pwz_A Shikimate dehydrogenase 54.8 11 0.00036 31.6 3.8 31 281-311 118-149 (272)
450 2rir_A Dipicolinate synthase, 54.8 10 0.00035 32.0 3.9 30 282-311 156-185 (300)
451 3tnl_A Shikimate dehydrogenase 54.5 12 0.00042 31.9 4.3 31 281-311 152-183 (315)
452 1jnr_A Adenylylsulfate reducta 54.4 16 0.00056 34.6 5.5 58 53-113 154-216 (643)
453 3oml_A GH14720P, peroxisomal m 54.4 7.5 0.00026 36.7 3.1 37 5-41 7-51 (613)
454 3o8q_A Shikimate 5-dehydrogena 54.3 14 0.00049 30.9 4.6 31 281-311 124-155 (281)
455 2jae_A L-amino acid oxidase; o 54.0 13 0.00044 33.6 4.6 55 51-113 240-294 (489)
456 3l9w_A Glutathione-regulated p 53.9 11 0.00037 33.7 3.9 31 105-135 6-36 (413)
457 3p2y_A Alanine dehydrogenase/p 53.7 8.5 0.00029 33.9 3.2 33 103-135 184-216 (381)
458 3rui_A Ubiquitin-like modifier 53.5 12 0.00042 32.3 4.1 30 282-311 33-63 (340)
459 3gyx_A Adenylylsulfate reducta 53.5 12 0.00041 35.6 4.4 59 52-113 168-231 (662)
460 3t4e_A Quinate/shikimate dehyd 53.2 14 0.00047 31.6 4.3 31 281-311 146-177 (312)
461 3jyo_A Quinate/shikimate dehyd 53.0 12 0.00041 31.4 3.9 31 281-311 125-156 (283)
462 1kdg_A CDH, cellobiose dehydro 52.8 15 0.00052 33.8 5.0 57 54-113 200-259 (546)
463 4g65_A TRK system potassium up 52.4 5.9 0.0002 36.0 2.0 32 105-136 5-36 (461)
464 3ado_A Lambda-crystallin; L-gu 52.0 11 0.00038 32.3 3.6 30 105-134 8-37 (319)
465 3don_A Shikimate dehydrogenase 52.0 10 0.00036 31.7 3.4 30 282-311 116-146 (277)
466 3fbt_A Chorismate mutase and s 51.8 13 0.00046 31.2 4.0 31 281-311 120-151 (282)
467 2x5o_A UDP-N-acetylmuramoylala 51.6 7.3 0.00025 35.0 2.5 42 20-71 15-56 (439)
468 3ksu_A 3-oxoacyl-acyl carrier 51.6 32 0.0011 28.1 6.3 43 21-67 23-65 (262)
469 1x13_A NAD(P) transhydrogenase 50.6 13 0.00043 33.1 3.8 33 103-135 172-204 (401)
470 4e12_A Diketoreductase; oxidor 50.4 13 0.00046 30.9 3.8 30 105-134 6-35 (283)
471 3sx2_A Putative 3-ketoacyl-(ac 50.3 23 0.0008 29.1 5.3 32 11-42 7-46 (278)
472 1c1d_A L-phenylalanine dehydro 50.3 13 0.00045 32.4 3.8 31 281-311 173-203 (355)
473 2jbv_A Choline oxidase; alcoho 50.2 14 0.00048 34.2 4.2 57 54-113 213-271 (546)
474 2raf_A Putative dinucleotide-b 49.8 16 0.00055 28.9 4.0 33 104-136 20-52 (209)
475 4dmm_A 3-oxoacyl-[acyl-carrier 49.7 22 0.00074 29.3 5.0 34 8-41 19-60 (269)
476 1f0y_A HCDH, L-3-hydroxyacyl-C 49.6 14 0.00047 31.1 3.8 30 105-134 17-46 (302)
477 1zcj_A Peroxisomal bifunctiona 49.3 14 0.00048 33.5 4.0 29 283-311 37-65 (463)
478 1vl6_A Malate oxidoreductase; 49.0 12 0.00041 33.0 3.3 34 102-135 191-225 (388)
479 4ffl_A PYLC; amino acid, biosy 48.8 20 0.00068 31.0 4.8 32 105-136 3-34 (363)
480 1npy_A Hypothetical shikimate 48.7 13 0.00045 30.9 3.5 30 282-311 118-148 (271)
481 2x5o_A UDP-N-acetylmuramoylala 48.5 9.4 0.00032 34.3 2.7 32 105-136 7-38 (439)
482 1l7d_A Nicotinamide nucleotide 48.5 16 0.00053 32.2 4.1 33 103-135 172-204 (384)
483 1ks9_A KPA reductase;, 2-dehyd 48.4 16 0.00055 30.2 4.0 32 105-136 2-33 (291)
484 3qvp_A Glucose oxidase; oxidor 48.0 9.5 0.00032 35.8 2.7 73 53-129 230-316 (583)
485 1gpj_A Glutamyl-tRNA reductase 47.5 13 0.00045 32.9 3.5 30 282-311 166-196 (404)
486 4hp8_A 2-deoxy-D-gluconate 3-d 47.3 22 0.00075 29.2 4.6 29 14-42 6-42 (247)
487 3ond_A Adenosylhomocysteinase; 47.1 15 0.00052 33.5 3.8 31 281-311 263-293 (488)
488 2gk4_A Conserved hypothetical 47.0 45 0.0015 27.0 6.3 23 20-42 30-52 (232)
489 4h15_A Short chain alcohol deh 46.8 12 0.0004 31.0 2.8 29 14-42 8-44 (261)
490 3ce6_A Adenosylhomocysteinase; 46.6 16 0.00055 33.4 3.9 31 281-311 272-302 (494)
491 3gvp_A Adenosylhomocysteinase 46.6 16 0.00054 32.8 3.8 31 281-311 218-248 (435)
492 1y8q_A Ubiquitin-like 1 activa 46.6 16 0.00054 31.7 3.7 29 283-311 36-65 (346)
493 3l07_A Bifunctional protein fo 46.6 16 0.00055 30.7 3.6 32 280-311 158-190 (285)
494 3ngx_A Bifunctional protein fo 46.3 16 0.00056 30.5 3.6 31 281-311 148-179 (276)
495 3hn2_A 2-dehydropantoate 2-red 46.1 21 0.00073 30.2 4.5 31 105-135 4-34 (312)
496 3is3_A 17BETA-hydroxysteroid d 46.1 31 0.0011 28.2 5.4 34 8-41 9-50 (270)
497 3k6j_A Protein F01G10.3, confi 46.0 15 0.00053 33.2 3.7 28 284-311 55-82 (460)
498 3n58_A Adenosylhomocysteinase; 45.5 17 0.00058 32.8 3.8 32 280-311 244-275 (464)
499 3p2o_A Bifunctional protein fo 45.3 21 0.00072 30.0 4.1 32 280-311 157-189 (285)
500 3uve_A Carveol dehydrogenase ( 44.8 35 0.0012 28.1 5.6 31 12-42 6-44 (286)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.93 E-value=2.4e-25 Score=209.15 Aligned_cols=209 Identities=53% Similarity=0.882 Sum_probs=176.0
Q ss_pred ccccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH-HHHHcC
Q psy11185 100 HKYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK-DAVAYG 178 (312)
Q Consensus 100 ~~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~ 178 (312)
.+++||+||||+||+|+.+|..+.+.|.++.++|+....+...-+..|+.|.+.+|.|++....+......+. ....|+
T Consensus 39 ~~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 39 HTYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 5678999999999999999999999999999999876665556677899999999999998887776665554 234466
Q ss_pred CccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEec--CCCeEEEEcCeEEEccCC
Q psy11185 179 WEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMK--NGEKKTLTAENILIATGG 256 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~--~G~~~~i~ad~vVlAtG~ 256 (312)
+... ...+||..+..+.....+.+.......++..+|+++.+...+.++..+.+... .++.+++.+|++|||||+
T Consensus 119 i~~~---~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 119 WKFD---NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGC 195 (542)
T ss_dssp EEEE---EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCE
T ss_pred cccC---cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCC
Confidence 5433 36789999999988888887777777888999999999999999998887653 244578999999999999
Q ss_pred CCCCCCCCCC-CcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGA-KEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~-~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|..|+.++. ....+++++++.+...|++++|||||++|+|.|..+...+.+||+
T Consensus 196 ~P~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTi 251 (542)
T 4b1b_A 196 RPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTV 251 (542)
T ss_dssp EECCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 9999865544 455789999999999999999999999999999999999999987
No 2
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.93 E-value=1.9e-24 Score=203.38 Aligned_cols=209 Identities=60% Similarity=1.003 Sum_probs=180.1
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
..++|++|||+|++|+.+|..+.+.+.+++++|+....+...-|..|+.|.+.+|.|++....+......+.....+++.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 45799999999999999999999999999999986655556667899999999999999877777766777777778765
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
... ...++|..+..+...+.+.+.......+...+|+++.+.....+...+.+.+.+|+..++.||+||||||+.|+.
T Consensus 110 ~~~--~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 110 VEE--TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp CCS--SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cCC--cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 433 357899999988888877777667777788899999999888899999998888865689999999999999999
Q ss_pred CCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|...+.+++.++..+...+++++|||+|++|+|.|..+...+.+|++
T Consensus 188 p~i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtl 238 (519)
T 3qfa_A 188 LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTV 238 (519)
T ss_dssp CCCTTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEE
Confidence 999998777788888888888899999999999999999999988888886
No 3
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.92 E-value=4.6e-24 Score=199.43 Aligned_cols=209 Identities=60% Similarity=0.974 Sum_probs=178.2
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
..++|++|||+|++|+.+|..+.+.+.+++++|+........-+..|+.|.+.+|.|++....+......+.....|++.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 45789999999999999999999999999999975544444446689999999999999887777777777777778765
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
... ...++|..+..+...+...+.......+...+|+++.+.....+...+.+.+.+|+..++.||+||+|||+.|..
T Consensus 84 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 84 VAQ--PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp CCS--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cCC--cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 543 357899999888888877777767777888899999999888888999998888866789999999999999999
Q ss_pred CC-CCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PD-IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~-~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+ +||...+.+++.++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 162 p~~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 213 (488)
T 3dgz_A 162 PTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTV 213 (488)
T ss_dssp CSSCBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEE
Confidence 98 9998767788888888888899999999999999999999988888886
No 4
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.91 E-value=1.6e-23 Score=195.53 Aligned_cols=208 Identities=61% Similarity=1.061 Sum_probs=176.2
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCC-CCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSP-QGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~-~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
..++|++|||+|++|+.+|..+.+.+.+++++|+..+.. ...-|..|+.|.+.+|.|++....+......+.....|++
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 357899999999999999999999999999999643333 4455778999999999999888777777777777777776
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
.... ...++|..+..+...+.+.+.......+...+|+++.+.....+...+.+.+.+|+ .++.||+||+|||+.|+
T Consensus 87 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~-~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 87 NVDD--KIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE-RTITAQTFVIAVGGRPR 163 (483)
T ss_dssp CCCC--CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC-EEEEEEEEEECCCEEEC
T ss_pred ccCC--cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe-EEEEcCEEEEeCCCCcC
Confidence 5543 35679999988888887777766667788889999999988888888999888774 67999999999999999
Q ss_pred CCCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|.+.+.++++++..+...+++++|||+|.+|+|.+..+...+.+|++
T Consensus 164 ~p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 215 (483)
T 3dgh_A 164 YPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTV 215 (483)
T ss_dssp CCSSTTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 9999998777788888888888899999999999999999999988888886
No 5
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.90 E-value=5.7e-23 Score=196.64 Aligned_cols=210 Identities=58% Similarity=0.963 Sum_probs=172.0
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
...+|++|||+|++|+.+|..+.+.+.+++++|+..+......|..|+.|...+|.|++....+......+.....|++.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999999999974443345567789989899999988777666666666666667765
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.+. .....+|..+..++..+.+.+.......+...+|+++.+....++.+.+.+.+.+|+..++.||+||+|||+.|+.
T Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~ 263 (598)
T 2x8g_A 185 LDR-SKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKY 263 (598)
T ss_dssp CCG-GGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECC
T ss_pred ccC-CcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCC
Confidence 432 1146789999888888877776666666777899999888888888888888877755679999999999999999
Q ss_pred CCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|++||...+..++.++......+++|+|||||++|+|+|..|...+.+||+
T Consensus 264 p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 314 (598)
T 2x8g_A 264 PEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTV 314 (598)
T ss_dssp CSSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 999998767777777777777889999999999999999999988888886
No 6
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.86 E-value=4.2e-21 Score=178.96 Aligned_cols=195 Identities=38% Similarity=0.629 Sum_probs=158.9
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
...+|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|...+|.|++...........+.....+++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~---------~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~ 88 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK---------LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFP 88 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC---------CCCcccccCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 346899999999999999999999999999999642 57778888999988776666555555444445543
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. ...++|..+..+...+.+.+...+...+...+++++.+.....+...+.+. .+| .++.||+||+|||+.|..
T Consensus 89 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g--~~~~~d~lviAtG~~p~~ 162 (478)
T 3dk9_A 89 SC---EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSG--KKYTAPHILIATGGMPST 162 (478)
T ss_dssp CC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETT--EEEECSCEEECCCEEECC
T ss_pred CC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECC--EEEEeeEEEEccCCCCCC
Confidence 32 256789998888888877777777777888899999988777766655665 455 579999999999999999
Q ss_pred C---CCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 P---DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p---~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
| +++|.. +.++++++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 163 p~~~~i~G~~-~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 215 (478)
T 3dk9_A 163 PHESQIPGAS-LGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSL 215 (478)
T ss_dssp CCTTTSTTGG-GSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCCCCCCc-eeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 9 899986 5678888888888899999999999999999999988888886
No 7
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.86 E-value=8.3e-21 Score=176.37 Aligned_cols=191 Identities=24% Similarity=0.404 Sum_probs=155.5
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+.....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~--------~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~------ 69 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE--------LGGNCLYSGCVPSKTVREVIQTAWRLTNIAN------ 69 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS--------SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC--------CCCcccccCCCchHHHHHHHHHHHHHHhccc------
Confidence 58999999999999999999999999999996432 6777888899988877666655555544332
Q ss_pred CccccccCHHHHHHHHHHHHHHhh--HHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVN--WVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
....++|..+..+.....+ +. ..+...+...+++++.+.+..++...+.+.+.+|+..++.||+||+|||+.|+.
T Consensus 70 --~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~ 146 (466)
T 3l8k_A 70 --VKIPLDFSTVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAK 146 (466)
T ss_dssp --SCCCCCHHHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred --CCCCcCHHHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccC
Confidence 1356788888877776666 55 556667788899999988888888889998888844449999999999999999
Q ss_pred CCCCCCCcceecccccc----CCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHCISSDDIF----SLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~~~~~~~~----~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|.+ ..+++.++. .+...+++++|||+|++|+|.|..+...+.+|++
T Consensus 147 p~i~G~~-~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 200 (466)
T 3l8k_A 147 LRLPGVE-YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHI 200 (466)
T ss_dssp CCCTTGG-GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcc-ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 9999987 566777777 5666788999999999999999999988888886
No 8
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.86 E-value=1.8e-20 Score=174.47 Aligned_cols=199 Identities=33% Similarity=0.426 Sum_probs=155.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH--HHHHcCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK--DAVAYGW 179 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~ 179 (312)
.++|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+. ....+++
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~--------~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~ 76 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET--------LGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGI 76 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS--------SSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC--------cCCcccccCccchHHHHHHHHHHHHhhhhhHhhCcc
Confidence 468999999999999999999999999999997532 577788888888776655444444433 3344554
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
... ...+++..+..+.....+.+...+...+...+++++.++...++...+.+++.+|...++.||+||+|||+.|.
T Consensus 77 ~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~ 153 (474)
T 1zmd_A 77 EMS---EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVT 153 (474)
T ss_dssp EES---CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred ccC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCC
Confidence 321 24567888877776666666655666777889999988877777888888887633357999999999999999
Q ss_pred CCCCCCCCc-ceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKE-HCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~-~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|.+. ..+++.++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 154 ~p~i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 206 (474)
T 1zmd_A 154 PFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTA 206 (474)
T ss_dssp CCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCcCcEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 999998754 3678888887777889999999999999999999888888886
No 9
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.86 E-value=1.2e-20 Score=175.18 Aligned_cols=191 Identities=39% Similarity=0.694 Sum_probs=151.0
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|.+.+|.|++....+......+.....+++...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~---------~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~ 74 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA---------LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS 74 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC---------CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC
Confidence 5799999999999999999999999999999752 5777888889988876665555444444444554332
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPD 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~ 262 (312)
...++|..+..+...+.+.+...+...+...+++++.+....++.+.+.+ +| .++.||+||+|||+.|..|+
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~p~ 146 (463)
T 2r9z_A 75 ---GGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV---EG--QRLSADHIVIATGGRPIVPR 146 (463)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE---TT--EEEEEEEEEECCCEEECCCS
T ss_pred ---CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE---CC--EEEEcCEEEECCCCCCCCCC
Confidence 24578888888777776666666666677889999988876677766655 56 67999999999999999999
Q ss_pred CCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 263 ~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+||.+ ..++++++..+...+++++|||+|.+|+|.|..|...+.+|++
T Consensus 147 i~G~~-~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtl 194 (463)
T 2r9z_A 147 LPGAE-LGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTV 194 (463)
T ss_dssp CTTGG-GSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcc-ceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 99883 4667777777777789999999999999999999888888886
No 10
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.86 E-value=2e-20 Score=174.80 Aligned_cols=205 Identities=37% Similarity=0.605 Sum_probs=159.0
Q ss_pred cccEEEEecCcchHHHHHHHHH-CCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+ .+.+++++|+....+.+.-...|+.|...+|.|++....+......+.....|++..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 899999999321111111123688899999999988777666655555555555432
Q ss_pred CCcccc--ccCHHHHHHHHHHHHHHhhHHHHHHHhcC-CceEEeceeEEeeCCeEEEEe---cCCC-eEEEEcCeEEEcc
Q psy11185 182 PNVKSV--QHNWANLREAVQNHVKSVNWVTRVMLRDK-KVDYLNALGKFIDQHSVEATM---KNGE-KKTLTAENILIAT 254 (312)
Q Consensus 182 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~~~~~~~~~~~~~~~~v~~---~~G~-~~~i~ad~vVlAt 254 (312)
. .. .++|..+..+.....+.+...+...+... +|+++.++...++...+.+.+ .+|+ ...+.||+||+||
T Consensus 83 ~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 83 D---RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp C---GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred C---CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 1 12 57888888888777776666666777788 999999987778887777764 2452 2579999999999
Q ss_pred CCCCCCCCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcC---ceeeee
Q psy11185 255 GGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSG---CGNVTI 311 (312)
Q Consensus 255 G~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~---~~~V~~ 311 (312)
|+.|..|+++|.+ ..++++++..+...+++++|||+|.+|+|.|..+... +.+|++
T Consensus 160 Gs~p~~p~i~g~~-~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 218 (490)
T 1fec_A 160 GSWPQHLGIEGDD-LCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDL 218 (490)
T ss_dssp CEEECCCCSBTGG-GCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCCCCCCCCcc-ceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEE
Confidence 9999999999884 4677888888877889999999999999999998887 778876
No 11
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.85 E-value=1.6e-20 Score=174.92 Aligned_cols=204 Identities=25% Similarity=0.391 Sum_probs=161.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH-HHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD-AVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+.|.+++++|+... ..+-+..|+.|...+|.|++...........+.. ...+++..
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~--~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~ 80 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG--KEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIST 80 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC--TTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc--cCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 58999999999999999999999999999998642 2344557888989999988776655544444332 23344433
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
. ...++|..+..+.....+.+...+...+...+++++.+.....+...+.+.+.+|+...+.||+||+|||+.|..|
T Consensus 81 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 81 G---EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp S---CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred C---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 2 3567888888888777777766666777788999999998888888899988888667899999999999998877
Q ss_pred CCCCCC-cceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 262 DIPGAK-EHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 262 ~~~g~~-~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.++.+ ...+++.++..+...+++++|||+|++|+|.+..+...+.+|++
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 208 (476)
T 3lad_A 158 PPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTV 208 (476)
T ss_dssp TTSCCCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 666543 34678888888888899999999999999999999888888886
No 12
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.85 E-value=1.6e-20 Score=175.65 Aligned_cols=204 Identities=37% Similarity=0.638 Sum_probs=158.9
Q ss_pred ccccEEEEecCcchHHHHHHHHH-CCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
.++|++|||+|++|+.+|..+.+ .+.+++++|...+.+.+.-...|+.|...+|.|++....+......+.....|++.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 36899999999999999999999 89999999932221222122468889999999988777666655555555556654
Q ss_pred cCCcccc--ccCHHHHHHHHHHHHHHhhHHHHHHHhcC-CceEEeceeEEeeCCeEEEEec-C-----CCeEEEEcCeEE
Q psy11185 181 IPNVKSV--QHNWANLREAVQNHVKSVNWVTRVMLRDK-KVDYLNALGKFIDQHSVEATMK-N-----GEKKTLTAENIL 251 (312)
Q Consensus 181 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~~~~~~~~~~~~~~~~v~~~-~-----G~~~~i~ad~vV 251 (312)
.. .. .++|..+..+...+.+.+.......+... +|+++.++...++.+.+.+... + + ..+.||+||
T Consensus 86 ~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~--~~~~~d~lV 160 (495)
T 2wpf_A 86 FD---GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVK--ERLQADHIL 160 (495)
T ss_dssp CC---GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEE--EEEEEEEEE
T ss_pred cC---CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCC--eEEEcCEEE
Confidence 22 12 67888888888777776666666677778 9999999877778777776531 2 4 689999999
Q ss_pred EccCCCCCCCCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcC---ceeeee
Q psy11185 252 IATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSG---CGNVTI 311 (312)
Q Consensus 252 lAtG~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~---~~~V~~ 311 (312)
+|||+.|+.|+++|.+ ..++++++..+...+++++|||+|.+|+|.|..+... +.+|++
T Consensus 161 iATGs~p~~p~i~G~~-~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 222 (495)
T 2wpf_A 161 LATGSWPQMPAIPGIE-HCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTL 222 (495)
T ss_dssp ECCCEEECCCCCTTGG-GCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EeCCCCcCCCCCCCcc-ccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 9999999999999884 4677788888877889999999999999999998887 778886
No 13
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=8.2e-21 Score=177.00 Aligned_cols=200 Identities=37% Similarity=0.603 Sum_probs=155.4
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|.+.+|.|++....+......+.....+++..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~---------~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~ 80 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA---------LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQ 80 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBST
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC---------cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccc
Confidence 36899999999999999999999999999999752 577788888988877655544433333323334322
Q ss_pred CC--cc-ccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 182 PN--VK-SVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 182 ~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
.. .. ...++|..+..+...+.+.+...+...+...+++++.++...++.+.+.+++.+|+..++.||+||+|||+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 81 NLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp TSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred ccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 00 01 2457888888777777666666666677788999998887777777888888777445899999999999999
Q ss_pred CCC-CCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYP-DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p-~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..| ++||.+ ..++++++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 161 ~~p~~i~g~~-~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 213 (479)
T 2hqm_A 161 IFPENIPGFE-LGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHL 213 (479)
T ss_dssp CCCTTSTTGG-GSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCcc-cccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEE
Confidence 999 899884 4567778877777899999999999999999999888888886
No 14
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.85 E-value=2.8e-20 Score=172.92 Aligned_cols=199 Identities=30% Similarity=0.446 Sum_probs=153.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH-HHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD-AVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+.. ...++...
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~--------~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~ 73 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA--------LGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMG 73 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--------SSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC--------cCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 47999999999999999999999999999997532 5777888888887765554443333332 33345332
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
.. ...+++..+..+.....+.+...+...+.+.+++++.++...++...+.+.+.+|+..++.||+||+|||+.|..|
T Consensus 74 ~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 74 GE--GVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp GG--GCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred CC--CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 01 2356777777766665555555555666778999998887777888888888777557899999999999999999
Q ss_pred CCCCCCc-ceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 262 DIPGAKE-HCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 262 ~~~g~~~-~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+++|.+. ..+++.++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 152 ~~~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 202 (468)
T 2qae_A 152 PFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTV 202 (468)
T ss_dssp TTBCCCSSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCcCceechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEE
Confidence 8888754 4677888887777889999999999999999999888888886
No 15
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.85 E-value=3.7e-20 Score=173.16 Aligned_cols=197 Identities=34% Similarity=0.493 Sum_probs=156.3
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH-HHHcCCc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD-AVAYGWE 180 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~ 180 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+.. ..|+.|...+|.|++.............. ...++..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~--------~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~ 95 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS--------TYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVE 95 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS--------SSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC--------CCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcc
Confidence 46899999999999999999999999999999743 26778888899998876665555444433 2445544
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. ...++|..+..+.......+.......+...+++++.+.....+.+.+.+.+.+|+..++.||+||+|||+.|
T Consensus 96 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p-- 170 (491)
T 3urh_A 96 VA---NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV-- 170 (491)
T ss_dssp CC---CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEEC--
T ss_pred cC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCC--
Confidence 32 2467888888887777776666667778888999999998888888999988888667899999999999876
Q ss_pred CCCCCCC-----cceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAK-----EHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~-----~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|++||.+ ...+++.+.......+++++|||+|.+|+|.|..+...+.+|++
T Consensus 171 ~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 226 (491)
T 3urh_A 171 AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTV 226 (491)
T ss_dssp CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 4556553 23567778888888899999999999999999999888888886
No 16
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.85 E-value=3.4e-20 Score=171.77 Aligned_cols=196 Identities=31% Similarity=0.423 Sum_probs=147.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|...+|.|++...........+.....++..+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~---------~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~ 73 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN---------LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE 73 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC---------CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC
Confidence 5799999999999999999999999999999751 4666777788887655544433333332233343221
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPD 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~ 262 (312)
...+++..+..+.....+.+...+...+...+++++.++....+...+.+++.+|+ .++.||+||+|||+.|..|+
T Consensus 74 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~-~~i~~d~lViATGs~p~~~~ 149 (455)
T 1ebd_A 74 ---NVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSA-QTYTFKNAIIATGSRPIELP 149 (455)
T ss_dssp ---SCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEE-EEEECSEEEECCCEEECCBT
T ss_pred ---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCc-EEEEeCEEEEecCCCCCCCC
Confidence 23456776665555444445555566677789999988876677788888876662 57999999999999999998
Q ss_pred CCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 263 IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 263 ~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
++|.+...+++.++..+...+++++|||+|.+|+|.|..|...+.+|++
T Consensus 150 ~~g~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 198 (455)
T 1ebd_A 150 NFKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTI 198 (455)
T ss_dssp TBCCCSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCccceEecHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 8887655677777777777789999999999999999999888888886
No 17
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.85 E-value=1.3e-20 Score=174.25 Aligned_cols=191 Identities=40% Similarity=0.693 Sum_probs=151.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH-HHHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK-DAVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|.+.+|.|++....+......+. ....+++..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~---------~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~ 74 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE---------LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT 74 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC---------CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccC
Confidence 5799999999999999999999999999999752 577788889999887666555444443 333344332
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
. ...++|..+..+...+.+.+...+...+...+++++.++...++.+.+.+ +| .++.||+||+|||+.|..|
T Consensus 75 ~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~p 146 (450)
T 1ges_A 75 T---INKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NG--ETITADHILIATGGRPSHP 146 (450)
T ss_dssp E---EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE---TT--EEEEEEEEEECCCEEECCC
T ss_pred C---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE---CC--EEEEeCEEEECCCCCCCCC
Confidence 2 24578888888777777766666666777889999988877677766555 56 6899999999999999999
Q ss_pred CCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 262 DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 262 ~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
++||.+ ..++++++..+...+++++|||+|.+|+|.|..|...+.+|++
T Consensus 147 ~i~g~~-~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 195 (450)
T 1ges_A 147 DIPGVE-YGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHL 195 (450)
T ss_dssp CSTTGG-GSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcc-ceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 999884 4667777777777789999999999999999999888888886
No 18
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.85 E-value=2.4e-20 Score=174.71 Aligned_cols=192 Identities=36% Similarity=0.587 Sum_probs=139.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|...+|.|++....+......+.....+++...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~---------~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~ 72 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR---------LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK 72 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS---------TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC---------cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC
Confidence 4799999999999999999999999999999752 5777888888888776655555555544444554322
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEe-----------cCCCeEEEEcCeEE
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATM-----------KNGEKKTLTAENIL 251 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~-----------~~G~~~~i~ad~vV 251 (312)
..++|..+..+.......+...+...+...+++++.++...++.+.+.+.. .++ .++.||+||
T Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~--~~~~~d~lV 146 (500)
T 1onf_A 73 ----FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNE--EILEGRNIL 146 (500)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------CBSSEE
T ss_pred ----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCc--eEEEeCEEE
Confidence 356788777666655555555555667778999988876555555555543 124 579999999
Q ss_pred EccCCCCCCCCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 252 IATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 252 lAtG~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+|||+.|..|+++|.+ ..++++++..+.. +++++|||+|.+|+|.|..|...+.+|++
T Consensus 147 iAtGs~p~~p~i~G~~-~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 204 (500)
T 1onf_A 147 IAVGNKPVFPPVKGIE-NTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYI 204 (500)
T ss_dssp ECCCCCBCCCSCTTGG-GCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred ECCCCCCCCCCCCCCC-cccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEE
Confidence 9999999999999984 4667777777766 89999999999999999999988888886
No 19
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.84 E-value=1.7e-20 Score=175.42 Aligned_cols=196 Identities=26% Similarity=0.430 Sum_probs=154.2
Q ss_pred ccccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 100 HKYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 100 ~~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
...++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|.+.+|.|++....+......+.....|++
T Consensus 5 ~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~---------~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 75 (492)
T 3ic9_A 5 KVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA---------YGTTCARVGCMPSKLLIAAADASYHASQTDLFGI 75 (492)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC---------SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTE
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC---------CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCc
Confidence 3456899999999999999999999999999999742 7788999999999888777665555555455554
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcC-CceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDK-KVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
... ...+++..+..++....+.+...+...+... +++++.+...+.+.+.+.+ .++ .++.||+||+|||+.|
T Consensus 76 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~--~~~--~~~~~d~lViATGs~p 148 (492)
T 3ic9_A 76 QVD---RISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQV--DDH--SQVIAKRIVIATGSRP 148 (492)
T ss_dssp ECS---EEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEE--TTT--EEEEEEEEEECCCEEC
T ss_pred CCC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEE--cCC--cEEEeCEEEEccCCCC
Confidence 321 3457888888888777666655444444443 5778888877777776555 466 7899999999999999
Q ss_pred CCCCCCCC-CcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGA-KEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~-~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..|++++. ...++++.+++.+...+++++|||+|++|+|.|..+...+.+|++
T Consensus 149 ~~p~~~~~~~~~v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtl 202 (492)
T 3ic9_A 149 NYPEFLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKV 202 (492)
T ss_dssp CCCHHHHTTGGGEECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCccCCcEEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 99886653 445788888888888899999999999999999999998888886
No 20
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=4.9e-20 Score=171.36 Aligned_cols=199 Identities=29% Similarity=0.449 Sum_probs=150.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH-HHHcCCc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD-AVAYGWE 180 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~ 180 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+.. ...++..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~--------~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~ 76 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA--------LGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVK 76 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS--------SCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC--------ccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcc
Confidence 368999999999999999999998999999997532 3666777788887655544433333332 3334433
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. ...+++..+..+.....+.+...+...+...+++++.++....+...+.+++.+|+..++.||+||+|||+.|..
T Consensus 77 ~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 77 VS---NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp ES---CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECC
T ss_pred cC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 21 234577776666555555555555566667799999888766777788888777754679999999999999999
Q ss_pred CCCCCCCc-ceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKE-HCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~-~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|.+. ..+++.++..+...+++++|||+|.+|+|.|..|...+.+|++
T Consensus 154 p~~~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 205 (470)
T 1dxl_A 154 LPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTV 205 (470)
T ss_dssp BTTBCCCSSSEECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCcccEEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 99988754 4677778777777889999999999999999999887778886
No 21
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.84 E-value=6e-20 Score=170.64 Aligned_cols=197 Identities=25% Similarity=0.421 Sum_probs=144.8
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHc-CCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAY-GWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~ 181 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|.+.+|.|++....+............+ +...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~---------~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~ 74 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT---------IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAA 74 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC---------CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccC
Confidence 5799999999999999999999999999999752 56778888888877655443332222221111 1111
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhH-HHHHHHhcC-CceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNW-VTRVMLRDK-KVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
.....++..+........+.+.. .....+... +++++.+.....+.+.+.+.+.+|+..++.||+||+|||+.|+
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~ 151 (467)
T 1zk7_A 75 ---TVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPA 151 (467)
T ss_dssp ---CCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEEC
T ss_pred ---CCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCC
Confidence 12345666666554443333321 123445566 9999888877788888888887776568999999999999999
Q ss_pred CCCCCCCCcc-eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEH-CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~-~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|.+.. .+++.++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 152 ~p~i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 204 (467)
T 1zk7_A 152 VPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTV 204 (467)
T ss_dssp CCCCTTTTTSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCcCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 9999998653 567777777777889999999999999999999988888886
No 22
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.84 E-value=3.1e-20 Score=172.01 Aligned_cols=193 Identities=29% Similarity=0.418 Sum_probs=147.6
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccCC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPN 183 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 183 (312)
+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+.. ..+++...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~--------~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~- 71 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA--------LGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVK- 71 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--------SSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEEC-
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC--------CCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccC-
Confidence 6999999999999999999999999999997532 5667888888887665544433333332 33443321
Q ss_pred ccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCCC
Q psy11185 184 VKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDI 263 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~~ 263 (312)
...+++..+..+.....+.+...+...+...+++++.++....+.+.+.+.+ +| .++.||+||+|||+.|..|++
T Consensus 72 --~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g--~~~~~d~lviAtG~~p~~~~~ 146 (455)
T 2yqu_A 72 --GVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TG--EELEARYILIATGSAPLIPPW 146 (455)
T ss_dssp --CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TC--CEEEEEEEEECCCEEECCCTT
T ss_pred --CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CC--EEEEecEEEECCCCCCCCCCC
Confidence 2356777777666655555555555666777999998887777777788876 66 689999999999999999998
Q ss_pred CCCCc-ceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 264 PGAKE-HCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 264 ~g~~~-~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+|.+. ..+++.++..+...+++++|||+|.+|++.|..|...+.+|++
T Consensus 147 ~g~~~~~v~~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~l 195 (455)
T 2yqu_A 147 AQVDYERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIV 195 (455)
T ss_dssp BCCCSSSEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcCcEechHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 88754 4677777777777789999999999999999999888888876
No 23
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.84 E-value=3.5e-20 Score=172.04 Aligned_cols=194 Identities=35% Similarity=0.629 Sum_probs=157.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.++|++|||+|++|+.+|..+.+.|.+++++|+. ..|+.|...+|.|++...........+.....|++..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~---------~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~ 74 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF---------RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTV 74 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS---------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC---------CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 3689999999999999999999999999999973 2677788889999888777666666666666666543
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC-C
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN-Y 260 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~-~ 260 (312)
.. ..++|..+..+.......+...+...+...+++++.+.....+...+.+. .++ ..+.+|+||+|||+.|. .
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~-~~~--~~~~~d~lviAtG~~p~~~ 148 (463)
T 4dna_A 75 GE---SRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLL-ASG--KTVTAERIVIAVGGHPSPH 148 (463)
T ss_dssp CC---CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEET-TTT--EEEEEEEEEECCCEEECCC
T ss_pred CC---CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEe-cCC--eEEEeCEEEEecCCCcccC
Confidence 32 46788888888777776666666667777899999988777776655553 455 68999999999999999 9
Q ss_pred CCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|.+ ..++++++..+...+++++|||+|.+|+|.+..+...+.+|++
T Consensus 149 p~i~G~~-~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~ 198 (463)
T 4dna_A 149 DALPGHE-LCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTL 198 (463)
T ss_dssp TTSTTGG-GCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcc-ccccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 9999985 4677888888888899999999999999999999888888876
No 24
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.84 E-value=8.6e-20 Score=170.33 Aligned_cols=194 Identities=34% Similarity=0.629 Sum_probs=158.5
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.++|++|||+|++|+.+|..+.+.|.+++++|+.. .|+.|...+|.|++....+......+.....|++..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~---------~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~ 95 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR---------IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKY 95 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC---------CCCceeccCccccHHHHHHHHHHHHHHHHHhCCccc
Confidence 46899999999999999999999999999999732 577788899999988877777777777777777654
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC-C
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN-Y 260 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~-~ 260 (312)
.. ..+++..+..+.......+...+...+...+++++.+.....+...+.+. .++ ..+.+|+||+|||+.|. .
T Consensus 96 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~-~~~--~~~~~d~lviAtG~~p~~~ 169 (484)
T 3o0h_A 96 AD---PIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELS-VTG--ERISAEKILIATGAKIVSN 169 (484)
T ss_dssp CC---CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TTC--CEEEEEEEEECCCEEECCC
T ss_pred CC---CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEe-cCC--eEEEeCEEEEccCCCcccC
Confidence 33 46788888888777777666666677788899999998877777766654 255 68999999999999999 8
Q ss_pred CCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|.+ ..++++++..+...+++++|||+|.+|++.+..+...+.+|++
T Consensus 170 p~i~G~~-~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 219 (484)
T 3o0h_A 170 SAIKGSD-LCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTL 219 (484)
T ss_dssp --CBTGG-GSBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcc-ccccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEE
Confidence 9999975 4677788888888899999999999999999998888778875
No 25
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.83 E-value=1.1e-19 Score=168.82 Aligned_cols=196 Identities=26% Similarity=0.425 Sum_probs=146.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH-HHHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK-DAVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|...+|.|++...........+. ....++..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~---------~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~- 72 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY---------WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS- 72 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC---------CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 4799999999999999999999999999999751 356677777777665444333322222 11222322
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
....+++..+..+.....+.+...+...+...+++++.++....+...+.+.+.+|+..++.||+||+|||+.|+.|
T Consensus 73 ---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 73 ---GEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp ---ECCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred ---CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 12346777666555544455555556667778999988886666777888887777546799999999999999999
Q ss_pred CCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 262 DIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 262 ~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+++|.+...+++.++..+...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 150 ~~~g~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 199 (464)
T 2a8x_A 150 PGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTI 199 (464)
T ss_dssp TTCCCBTTEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCceEEecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEE
Confidence 98887655677778777777889999999999999999999888888886
No 26
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.83 E-value=1.2e-19 Score=168.34 Aligned_cols=190 Identities=29% Similarity=0.448 Sum_probs=145.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|.+.+|.|++...........+.....+++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~---------~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-- 74 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE---------VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-- 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE--
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC---------CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC--
Confidence 5899999999999999999999999999999743 46778888888887665554444444444445543
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPD 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~ 262 (312)
. ...+++..+..+.....+.+.......+...+|+++.++....+.+.+.+. | .++.||+||+|||+.|+.|+
T Consensus 75 ~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~---g--~~~~~d~lViATGs~p~~p~ 147 (464)
T 2eq6_A 75 A--KPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG---G--ERYGAKSLILATGSEPLELK 147 (464)
T ss_dssp C--CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET---T--EEEEEEEEEECCCEEECCBT
T ss_pred C--CCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc---c--EEEEeCEEEEcCCCCCCCCC
Confidence 1 245678877776666555555555566777899999888766676666553 5 58999999999999999886
Q ss_pred -CCCCCcceeccccccCCCC-CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 263 -IPGAKEHCISSDDIFSLEK-PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 263 -~~g~~~~~~~~~~~~~~~~-~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+++. ...+++.++..+.. .+++++|||+|.+|+|.|..|...+.+|+|
T Consensus 148 gi~~~-~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 197 (464)
T 2eq6_A 148 GFPFG-EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTL 197 (464)
T ss_dssp TBCCS-SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCC-CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 7773 34567777777765 789999999999999999999888888886
No 27
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.83 E-value=1.7e-19 Score=167.22 Aligned_cols=193 Identities=26% Similarity=0.396 Sum_probs=146.1
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHH---c
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVA---Y 177 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~---~ 177 (312)
...+|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.|...+|.|++....+......+..... +
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~---------~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~ 73 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA---------LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPL 73 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC---------TTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC---------CCCcCCCcCcHhHHHHHHHHHHHHHHhhccccccc
Confidence 346899999999999999999999899999999732 6777888888888765554444443333222 3
Q ss_pred CCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCC
Q psy11185 178 GWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~ 257 (312)
+.... ...+++..+..+.....+.+.......++..+|+++.++....+.+.+.+ .+ .++.||+||+|||+.
T Consensus 74 g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v--~~---~~~~~d~lviATGs~ 145 (458)
T 1lvl_A 74 GISVA---SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEV--DG---QRIQCEHLLLATGSS 145 (458)
T ss_dssp CCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEE--TT---EEEECSEEEECCCEE
T ss_pred CcccC---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEE--ee---EEEEeCEEEEeCCCC
Confidence 43321 24578888888777766666655666777889999988876666665554 22 579999999999999
Q ss_pred CCCCC-CCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 258 PNYPD-IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 p~~p~-~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+.|+ ++ .+...+++.++..+...+++++|||||.+|+|+|..|...+.+|++
T Consensus 146 p~~~~~~~-~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 199 (458)
T 1lvl_A 146 SVELPMLP-LGGPVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSV 199 (458)
T ss_dssp ECCBTTBC-CBTTEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCC-ccCcEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 98776 55 3334677788877777889999999999999999999888888886
No 28
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.82 E-value=3.6e-19 Score=166.02 Aligned_cols=198 Identities=33% Similarity=0.531 Sum_probs=146.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.++|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+.....++..+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~--------~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~ 76 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT--------LGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKY 76 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC--------SSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC--------CCCceeeecccchHHHHHHHHHHHHHHHHHhCCccc
Confidence 468999999999999999999999999999997432 456677778887765554444444443333344332
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCC----------CeEEEEcCeEE
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNG----------EKKTLTAENIL 251 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G----------~~~~i~ad~vV 251 (312)
. ...+++..+..+.....+.+...+...+...+++++.++....+...+.+++.+| +..++.||+||
T Consensus 77 ~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lV 153 (482)
T 1ojt_A 77 P---EPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCI 153 (482)
T ss_dssp C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred C---CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEE
Confidence 2 2356777776665555555555555667778999988886666777777765443 23579999999
Q ss_pred EccCCCCCCCC-CCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 252 IATGGRPNYPD-IPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 252 lAtG~~p~~p~-~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+|||++|..|+ ++ .+...+++.++..+...+++++|||||.+|+|.|..|...+.+|+|
T Consensus 154 iAtGs~p~~~~~i~-~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtl 213 (482)
T 1ojt_A 154 IAAGSRVTKLPFIP-EDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDV 213 (482)
T ss_dssp ECCCEEECCCSSCC-CCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEE
T ss_pred ECCCCCCCCCCCCC-ccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 99999998887 55 3335678888888777899999999999999999999888888886
No 29
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.81 E-value=3.8e-19 Score=166.57 Aligned_cols=199 Identities=24% Similarity=0.348 Sum_probs=147.0
Q ss_pred cccEEEEecCcchHHHHHHHHHC---CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAH---GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~---~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
.+|+||||+|++|+.+|..+.+. +.+++++|+.. .|+.|...+|.|++...........+.....++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~---------~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~ 72 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG---------IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGF 72 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC---------TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTB
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC---------cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCC
Confidence 47999999999999999999988 88999999743 4666777888887665544433333222222232
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeC------CeEEEEecCCCeEEEEcCeEEEc
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQ------HSVEATMKNGEKKTLTAENILIA 253 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~------~~~~v~~~~G~~~~i~ad~vVlA 253 (312)
... .....+++..+..+.....+.+...+...+...+++++.++...++. ..+.+.+.+|+...+.||+||+|
T Consensus 73 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviA 151 (499)
T 1xdi_A 73 HID-FDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVA 151 (499)
T ss_dssp C-------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEEC
T ss_pred ccc-cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEc
Confidence 100 01234677777777666555555555666777899999888766666 66778777774347999999999
Q ss_pred cCCCCCCCCCCCCCcc-eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 254 TGGRPNYPDIPGAKEH-CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 254 tG~~p~~p~~~g~~~~-~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
||+.|..|+++|.+.. .+++.++..+...+++++|||+|.+|+|.+..+...+.+|++
T Consensus 152 TGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 210 (499)
T 1xdi_A 152 TGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTV 210 (499)
T ss_dssp CCEEECCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 9999999999987643 567777777777889999999999999999999888888876
No 30
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.81 E-value=6.4e-19 Score=164.20 Aligned_cols=197 Identities=30% Similarity=0.484 Sum_probs=144.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH-HHHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK-DAVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|...+|.|++...........+. ....++...
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~--------~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~ 76 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK--------LGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDV 76 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--------SSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC--------cCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 57999999999999999999999999999997432 466777788888776554443333332 122233221
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEE------EEcCeEEEccC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKT------LTAENILIATG 255 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~------i~ad~vVlAtG 255 (312)
. ....+++..+..+.....+.+...+...+...+|+++.++....+...+.+++.+|+..+ +.||+||+|||
T Consensus 77 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 77 N--GDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp C--SCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCC
T ss_pred C--CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcC
Confidence 0 123567777777666666666555666677789999988866667778888877763235 99999999999
Q ss_pred CCCCCCCCCCCC---cceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 256 GRPNYPDIPGAK---EHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 256 ~~p~~p~~~g~~---~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|+. +||.+ ...+++.++..+...+++++|||+|.+|+|.|..|...+.+|++
T Consensus 155 s~p~~--~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 211 (478)
T 1v59_A 155 SEVTP--FPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTV 211 (478)
T ss_dssp EEECC--CTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCC--CCCCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 88743 34432 13567778877777789999999999999999999988888886
No 31
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.79 E-value=2.8e-19 Score=157.31 Aligned_cols=167 Identities=21% Similarity=0.205 Sum_probs=108.5
Q ss_pred CccccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcC
Q psy11185 99 THKYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYG 178 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 178 (312)
|++++||++|||+||+|+.+|..+.+.+.+++++|+.. .|+.|...+|.+.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~---------~gG~~~~~~~i~~-------------------- 52 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI---------PGGQMANTEEVEN-------------------- 52 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTGGGGGCSCBCC--------------------
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC---------CCCeeecccccCC--------------------
Confidence 34578999999999999999999999999999999743 3555655554321
Q ss_pred CccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCC
Q psy11185 179 WEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~ 257 (312)
++. ........+.... .....+....+.... ..............++ .++.||+||||||+.
T Consensus 53 --~p~--~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 53 --FPG--FEMITGPDLSTKM-----------FEHAKKFGAVYQYGDIKSVEDKGEYKVINFGN--KELTAKAVIIATGAE 115 (312)
T ss_dssp --STT--CSSBCHHHHHHHH-----------HHHHHHTTCEEEECCCCEEEECSSCEEEECSS--CEEEEEEEEECCCEE
T ss_pred --cCC--ccccchHHHHHHH-----------HHHHhhccccccceeeeeeeeeecceeeccCC--eEEEeceeEEcccCc
Confidence 000 0111222222111 112233344443332 2222222233334455 689999999999999
Q ss_pred CCCCCCCCCCcce----eccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 258 PNYPDIPGAKEHC----ISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 p~~p~~~g~~~~~----~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+.|++||.+.+. ..+.........+|+|+|||||++|+|.|..|...+.+|||
T Consensus 116 ~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtl 173 (312)
T 4gcm_A 116 YKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTI 173 (312)
T ss_dssp ECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEE
T ss_pred cCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 9999999987542 22222233335678999999999999999999999999987
No 32
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.74 E-value=1.9e-17 Score=155.82 Aligned_cols=193 Identities=23% Similarity=0.417 Sum_probs=134.5
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
...+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.|.+.+|.|++...........+.....+++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~--------~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~- 111 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF--------LGGSCPHNACVPHHLFSDCAAELMLARTFSGQYW- 111 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--------SSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTT-
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC--------CCCcccccCcCchHHHHHHHHHHHHHhhhhhcCc-
Confidence 3468999999999999999999999999999997542 5777888888887765554444333333333332
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHH-----hcCCceEE-eceeEEeeCCeEEEEecCCCeEEEEcCeEEEcc
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVML-----RDKKVDYL-NALGKFIDQHSVEATMKNGEKKTLTAENILIAT 254 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gV~~~-~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAt 254 (312)
++......+..+.+...+...... ....+ ...+++++ .+.+..++.+.+.+ . | ..+.||+||+||
T Consensus 112 ~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~--~-g--~~~~~d~lViAT 182 (523)
T 1mo9_A 112 FPDMTEKVVGIKEVVDLFRAGRNG----PHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEA--A-G--KVFKAKNLILAV 182 (523)
T ss_dssp CCCCTTCCCCHHHHHHHHHHHTHH----HHHHHHHHHHHTSCCCEEESSCCEEEETTEEEE--T-T--EEEEBSCEEECC
T ss_pred HHHHHhhhhhHHHHHHHHHhhhhh----hhhhhhhcccccCCcEEEEeeEEEEeeCCEEEE--C-C--EEEEeCEEEECC
Confidence 111001111233333333221110 00223 66789998 77777777665555 2 5 679999999999
Q ss_pred CCCCCCCCCCCCCcc-eecccccc-CCCCCC-CeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 255 GGRPNYPDIPGAKEH-CISSDDIF-SLEKPP-GKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 255 G~~p~~p~~~g~~~~-~~~~~~~~-~~~~~~-~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+.|..|+++|.+.. .+++.++. .+...+ ++++|||+|.+|+|.+..+...+.+|++
T Consensus 183 Gs~p~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtl 242 (523)
T 1mo9_A 183 GAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVM 242 (523)
T ss_dssp CEECCCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 999999999998653 56777777 666677 8999999999999999999888888876
No 33
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.71 E-value=1.5e-17 Score=146.21 Aligned_cols=169 Identities=16% Similarity=0.186 Sum_probs=109.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+||+|+.+|..+.+.+.+++++|+... |+.|.+ +|.++.... . .++
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~---------gg~~~~-G~~~~~~~i--------------~--~~~ 57 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA---------GGVAAG-GQLTTTTII--------------E--NFP 57 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG---------GGCCTT-CGGGGSSEE--------------C--CST
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC---------CCcccC-CCcCChHHh--------------h--hcc
Confidence 48999999999999999999999999999997531 222222 222211000 0 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEe--eCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFI--DQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~--~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. +..++...+... +...+...++++........ +...+.+.+.++ .++.||+||+|||+.|+.
T Consensus 58 g~-~~~i~~~~l~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 58 GF-PNGIDGNELMMN-----------MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEG--KEVLTKSVIIATGATAKR 123 (314)
T ss_dssp TC-TTCEEHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTC--CEEEEEEEEECCCEEECC
T ss_pred CC-cccCCHHHHHHH-----------HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCC--eEEEEeEEEEcccccccc
Confidence 00 112233333222 22334556677665553322 233455556666 789999999999999999
Q ss_pred CCCCCCCcce----eccccccCC--CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHC----ISSDDIFSL--EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~----~~~~~~~~~--~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|++||.+.+. ......... ...+++++|||+|++|+|.|..+...+.+||+
T Consensus 124 ~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~ 180 (314)
T 4a5l_A 124 MHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVII 180 (314)
T ss_dssp CCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEE
T ss_pred cCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeee
Confidence 9999986431 222222222 24578999999999999999999999999987
No 34
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.69 E-value=4.9e-17 Score=152.80 Aligned_cols=166 Identities=28% Similarity=0.419 Sum_probs=123.6
Q ss_pred hhhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 19 VDSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 19 ~~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
-.||+|+|.+|+++|.+|||++|+++|+.+|+++++.+.+.|+++||++++++.+.+++... +.+.+.+.++
T Consensus 232 G~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~~~v~~~~~------- 303 (542)
T 4b1b_A 232 SYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKILVEFSDK------- 303 (542)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TEEEEEETTS-------
T ss_pred CHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecC-CeEEEEEcCC-------
Confidence 35999999999999999999999889999999999999999999999999999999998754 4456666554
Q ss_pred CccccccEEEEecCc----chHHHHHHHH--HCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGS----GGLAAAKEAA--AHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 99 ~~~~~~d~vivg~G~----~gl~~a~~~~--~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
..+.+|.|+++.|+ .++.+..... .....++++|.+++|+.|+|||+||++...+ .+.+.+..+++.+.
T Consensus 304 -~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p----~La~~A~~eg~~aa 378 (542)
T 4b1b_A 304 -TSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVP----ELAPVAIKAGEILA 378 (542)
T ss_dssp -CEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCC----CCHHHHHHHHHHHH
T ss_pred -CeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCch----hHHHHHHHHHHHHH
Confidence 45679999999996 3333332221 2233467889999999999999999654443 35667777787777
Q ss_pred HHHHcCCccCCccccccCHHHHHHHHHHHHH
Q psy11185 173 DAVAYGWEIPNVKSVQHNWANLREAVQNHVK 203 (312)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
.+. ++.. ...+++..+|..+|+.|+
T Consensus 379 ~~i-~g~~-----~~~~d~~~iP~~vft~Pe 403 (542)
T 4b1b_A 379 RRL-FKDS-----DEIMDYSYIPTSIYTPIE 403 (542)
T ss_dssp HHH-HSCC-----CCCCCCSSCCEEECSSSC
T ss_pred HHH-hcCC-----CcccCCCCCceEEeCCCC
Confidence 765 3311 223455555555555544
No 35
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.66 E-value=9.2e-16 Score=144.72 Aligned_cols=189 Identities=18% Similarity=0.163 Sum_probs=112.1
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchh----hHHHHHHHHHHHHHHHHHc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPK----KLMHQAALLGEAIKDAVAY 177 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~----~~~~~a~~~~~~~~~~~~~ 177 (312)
..+|+||||+|++|+.+|..|.+.+.+++++|+... .|+.+. .++.|. ...+... ..+.....-
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~--------~GGtw~-~~~yPg~~~d~~~~~y~---~~f~~~~~~ 75 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGED--------VGGTWY-WNRYPGCRLDTESYAYG---YFALKGIIP 75 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS--------SCTHHH-HCCCTTCBCSSCHHHHC---HHHHTTSST
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC--------CCCccc-cCCCCceeecCchhhcc---cccCccccc
Confidence 467999999999999999999999999999997542 222221 111110 0000000 000000000
Q ss_pred CCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccC--
Q psy11185 178 GWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATG-- 255 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG-- 255 (312)
.+.+ .....+...+..++....+.+.. ...+ ..+.++... ....+...+.+++.+| .++.||+||+|||
T Consensus 76 ~~~~---~~~~~~~~ei~~yl~~~~~~~~l--~~~i-~~~~~V~~~-~~~~~~~~w~V~~~~G--~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 76 EWEW---SENFASQPEMLRYVNRAADAMDV--RKHY-RFNTRVTAA-RYVENDRLWEVTLDNE--EVVTCRFLISATGPL 146 (545)
T ss_dssp TCCC---SBSSCBHHHHHHHHHHHHHHHTC--GGGE-ECSCCEEEE-EEEGGGTEEEEEETTT--EEEEEEEEEECCCSC
T ss_pred CCCc---cccCCCHHHHHHHHHHHHHHcCC--cCcE-EECCEEEEE-EEeCCCCEEEEEECCC--CEEEeCEEEECcCCC
Confidence 1111 12345566666665544433220 0000 011111111 1111235688888888 6899999999999
Q ss_pred CCCCCCCCCCCCcc---eecc-ccccC-------CCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 256 GRPNYPDIPGAKEH---CISS-DDIFS-------LEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 256 ~~p~~p~~~g~~~~---~~~~-~~~~~-------~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|+.|++||.+.| ..|+ ..... ....+|+|+|||+|.||+|.+..|...+++||+
T Consensus 147 s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv 213 (545)
T 3uox_A 147 SASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYV 213 (545)
T ss_dssp BC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEE
T ss_pred CCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEE
Confidence 78999999998764 2333 33333 455788999999999999999999998889886
No 36
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.64 E-value=9.3e-16 Score=134.37 Aligned_cols=164 Identities=18% Similarity=0.172 Sum_probs=106.0
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
+.++|++|||+||+|+.+|..+.+.+.+++++|+... .|-.+...+ ++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~--------gg~~~~~~~-----------------------~~~ 52 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN--------RNRVTQNSH-----------------------GFI 52 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC--------GGGGSSCBC-----------------------CST
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC--------CCeeeeecC-----------------------Ccc
Confidence 4468999999999999999999999999999997531 111111110 110
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEe---eCCeEEEEecCCCeEEEEcCeEEEccCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFI---DQHSVEATMKNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~---~~~~~~v~~~~G~~~~i~ad~vVlAtG~~ 257 (312)
. ...+....+.... .....+...+.+........ +...+++.+.+| .++.||+||||||+.
T Consensus 53 --~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 53 --T--RDGIKPEEFKEIG----------LNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDH--TKYLAERVLLATGMQ 116 (304)
T ss_dssp --T--CTTBCHHHHHHHH----------HHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTC--CEEEEEEEEECCCCE
T ss_pred --C--CCCCCHHHHHHHH----------HHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCC--CEEEeCEEEEccCCc
Confidence 0 0112222222211 11112233456665554332 344577888888 789999999999999
Q ss_pred CCCCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhh-HHHHHHhhcCceeeee
Q psy11185 258 PNYPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIG-KLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 p~~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa-~~~a~~l~~~~~~V~~ 311 (312)
|+.|++||.+.+ ..++.........+++++|||||.++ ++++..+...+++|++
T Consensus 117 p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i 175 (304)
T 4fk1_A 117 EEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVI 175 (304)
T ss_dssp EECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEE
T ss_pred cccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEE
Confidence 999999998653 23444444455567788888888765 5888888888888876
No 37
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.64 E-value=4.3e-15 Score=131.20 Aligned_cols=165 Identities=18% Similarity=0.195 Sum_probs=109.5
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.+...... . .+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~---------~gg~~~~~~~~--------------------~--~~ 55 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM---------PGGQIAWSEEV--------------------E--NF 55 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTGGGGGCSCB--------------------C--CS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC---------CCccccccccc--------------------c--cC
Confidence 46899999999999999999999999999999852 23322221100 0 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCC---e--EEEEecCCCeEEEEcCeEEEccCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQH---S--VEATMKNGEKKTLTAENILIATGG 256 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~---~--~~v~~~~G~~~~i~ad~vVlAtG~ 256 (312)
+.. +..++...+..+ +...+.+.++++....+..++.. . +.+.+.+| .++.||+||+|||+
T Consensus 56 ~~~-~~~~~~~~~~~~-----------l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 56 PGF-PEPIAGMELAQR-----------MHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYN--GEYRAKAVILATGA 121 (325)
T ss_dssp TTC-SSCBCHHHHHHH-----------HHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESS--CEEEEEEEEECCCE
T ss_pred CCC-CCCCCHHHHHHH-----------HHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCC--CEEEeCEEEECcCC
Confidence 000 011223333222 22334566888876655444321 2 56666677 58999999999999
Q ss_pred CCCCCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+.|+++|.+.+ .+...........+++|+|||+|.+|+|.|..|...+.+|++
T Consensus 122 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtl 180 (325)
T 2q7v_A 122 DPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTV 180 (325)
T ss_dssp EECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEE
T ss_pred CcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 9999999988643 122222222334578999999999999999999998888886
No 38
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.63 E-value=1.2e-15 Score=142.63 Aligned_cols=197 Identities=14% Similarity=0.059 Sum_probs=111.6
Q ss_pred cccEEEEecCcchHHHHHHHHHCC--------------CcEEEEeccCCCCCC-cccc---------cCCcccccccchh
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG--------------RKVIVLDYVIPSPQG-TTWG---------LGGTCVNVGCIPK 158 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~--------------~~~~~ve~~~~~~~~-~v~a---------~Gd~~~~~~~~~~ 158 (312)
-+|+||||+||+||++|..|.+.+ .....+|+...-.+. +... .-|.++..+....
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~ 118 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSS 118 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCc
Confidence 479999999999999998886532 134566654432221 1111 1222111110000
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee-----CCeE
Q psy11185 159 KLMHQAALLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID-----QHSV 233 (312)
Q Consensus 159 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~-----~~~~ 233 (312)
-.+.........+.... .....++...++..|+..+++.+.. . -+.+-++..-.....+ ...|
T Consensus 119 ~sf~~yl~~~~rl~~f~-------~~~~~~p~r~E~~~Yl~~~A~~~~~----~-vrf~~~V~~v~~~~~~~~~~~~~~~ 186 (501)
T 4b63_A 119 FTFLNYLHQKGRLIHFT-------NLSTFLPARLEFEDYMRWCAQQFSD----V-VAYGEEVVEVIPGKSDPSSSVVDFF 186 (501)
T ss_dssp TSHHHHHHHHTCHHHHH-------TTCCSCCBHHHHHHHHHHHHHTTGG----G-EEESEEEEEEEEECSSTTSSCBCEE
T ss_pred cchHHHHHHhCCccCCc-------cccCCCCCHHHHHHHHHHHHHHcCC----c-eEcceEEEeeccccccccccccceE
Confidence 01111111111111111 1124567788888888887765441 0 1112222211111111 1235
Q ss_pred EEEe---cCCCeEEEEcCeEEEccCCCCCCCCCCCCCcceeccccccC-------CCCCCCeEEEEcCchhhHHHHHHhh
Q psy11185 234 EATM---KNGEKKTLTAENILIATGGRPNYPDIPGAKEHCISSDDIFS-------LEKPPGKTLVVGAGYIGKLETWDSN 303 (312)
Q Consensus 234 ~v~~---~~G~~~~i~ad~vVlAtG~~p~~p~~~g~~~~~~~~~~~~~-------~~~~~~~v~VvG~G~sa~~~a~~l~ 303 (312)
+|+. .+|+..++.|+.||+|||..|.+|..++.....+|+.++.. ....+|||+|||+|+||++++.+|.
T Consensus 187 ~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~ 266 (501)
T 4b63_A 187 TVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQ 266 (501)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHH
T ss_pred EEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHH
Confidence 5554 34566789999999999999998887766656667766543 3467889999999999999999886
Q ss_pred cC--ceeeee
Q psy11185 304 SG--CGNVTI 311 (312)
Q Consensus 304 ~~--~~~V~~ 311 (312)
.. +.+|++
T Consensus 267 ~~~~~~~v~~ 276 (501)
T 4b63_A 267 KRYPNSRTTL 276 (501)
T ss_dssp HHSTTCEEEE
T ss_pred hcCCCceEEE
Confidence 43 456664
No 39
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.63 E-value=8.3e-15 Score=138.03 Aligned_cols=183 Identities=18% Similarity=0.226 Sum_probs=113.7
Q ss_pred ccccEEEEecCcchHHHHHHHH-HCCCcEEEEeccCCCCCCcccccCCccccccc---chhhHHHHHHHHHHHHHHHHHc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAA-AHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGC---IPKKLMHQAALLGEAIKDAVAY 177 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~-~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~---~~~~~~~~a~~~~~~~~~~~~~ 177 (312)
..+|++|||+|++|+.+|..|. +.|.+++++|+.... .+.|... ...++ .+........ . ..+. ..+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~--GGtw~~~---~ypg~~~d~~s~~~~~~~-~-~~~~--~~~ 77 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP--GGTWYWN---RYPGALSDTESHLYRFSF-D-RDLL--QES 77 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS--CTHHHHC---CCTTCEEEEEGGGSSCCS-C-HHHH--HHC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC--CCccccc---CCCCceecCCcceeeecc-c-cccc--cCC
Confidence 3579999999999999999999 888899999985421 1211110 00011 1111000000 0 0000 112
Q ss_pred CCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCc--eEEec-eeEEe--e--CCeEEEEecCCCeEEEEcCeE
Q psy11185 178 GWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKV--DYLNA-LGKFI--D--QHSVEATMKNGEKKTLTAENI 250 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV--~~~~~-~~~~~--~--~~~~~v~~~~G~~~~i~ad~v 250 (312)
.+. ....+...+..++.... .+.++ .+... .+..+ + ...+++++.+| .++.||+|
T Consensus 78 ~~~-----~~~~~~~ei~~~l~~~~-----------~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--~~i~ad~l 139 (540)
T 3gwf_A 78 TWK-----TTYITQPEILEYLEDVV-----------DRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--EVYRAKYV 139 (540)
T ss_dssp CCS-----BSEEEHHHHHHHHHHHH-----------HHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--CEEEEEEE
T ss_pred CCc-----ccCCCHHHHHHHHHHHH-----------HHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--CEEEeCEE
Confidence 221 23445555555544433 23333 23222 12222 2 24788888888 57899999
Q ss_pred EEccC--CCCCCCCCCCCCcc---eec-cccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 251 LIATG--GRPNYPDIPGAKEH---CIS-SDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 251 VlAtG--~~p~~p~~~g~~~~---~~~-~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+||| +.|+.|++||.+.| ..| ..........+++|+|||+|.||+|.+..|...+++||+
T Consensus 140 V~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv 206 (540)
T 3gwf_A 140 VNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTV 206 (540)
T ss_dssp EECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEE
T ss_pred EECCcccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEE
Confidence 99999 68999999998764 233 344445556788999999999999999999999989986
No 40
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.63 E-value=6.1e-15 Score=128.16 Aligned_cols=160 Identities=15% Similarity=0.203 Sum_probs=109.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+....+ -|.. ....++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~---~~~~------------------------------~~~~~~ 48 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN---RFAS------------------------------HSHGFL 48 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG---GGCS------------------------------CCCSST
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc---ccch------------------------------hhcCCc
Confidence 3699999999999999999999999999999743210 0000 000000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcC-CceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDK-KVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
. ....+...+..++ ...+... +++++...+..++ ...+.+++.+| .++.||+||+|||+.|+
T Consensus 49 ~--~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 49 G--QDGKAPGEIIAEA-----------RRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGG--RRETAGRLILAMGVTDE 113 (297)
T ss_dssp T--CTTCCHHHHHHHH-----------HHHHTTCTTEEEEESCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCCEEE
T ss_pred C--CCCCCHHHHHHHH-----------HHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCC--CEEEcCEEEECCCCCCC
Confidence 0 1122333333332 2233443 7888777655544 34578888888 68999999999999999
Q ss_pred CCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|...+ .+++.........+++++|||+|.+|++.+..|...+ +|++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~ 168 (297)
T 3fbs_A 114 LPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTF 168 (297)
T ss_dssp CCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEE
T ss_pred CCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEE
Confidence 9999998653 2333323333456789999999999999999998877 7775
No 41
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.63 E-value=7.6e-15 Score=135.47 Aligned_cols=194 Identities=18% Similarity=0.129 Sum_probs=112.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCC--cEEEEeccCCCCCCcccccCCcccccccch---------------------hh
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVIPSPQGTTWGLGGTCVNVGCIP---------------------KK 159 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~---------------------~~ 159 (312)
.+|++|||+|++|+.+|..|.+.+. +++++|+... ..+.|....+.......| ..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~--~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS--PGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS--SSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCC--CCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 5799999999999999999999998 9999997532 123333222100000000 00
Q ss_pred HHHH-HHHHHHHHHHHHHc-CCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEe--eCCeEE
Q psy11185 160 LMHQ-AALLGEAIKDAVAY-GWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFI--DQHSVE 234 (312)
Q Consensus 160 ~~~~-a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~--~~~~~~ 234 (312)
.... ...... ....| ++.++......+.+..+..++..+.+.+ +..+... .+..+ +...+.
T Consensus 84 ~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----------~~~i~~~t~V~~v~~~~~~~~ 149 (447)
T 2gv8_A 84 LYRDLQTNTPI---ELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPL-----------LPFIKLATDVLDIEKKDGSWV 149 (447)
T ss_dssp CCTTCBCSSCH---HHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGG-----------GGGEECSEEEEEEEEETTEEE
T ss_pred hhhhhccCCCH---HHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------hCeEEeCCEEEEEEeCCCeEE
Confidence 0000 000000 00011 1122221123445556666655544332 2222111 12222 234455
Q ss_pred EEecC---CC-eEEEEcCeEEEccCC--CCCCCCCCCCCcc-------eeccccccCCC-CCCCeEEEEcCchhhHHHHH
Q psy11185 235 ATMKN---GE-KKTLTAENILIATGG--RPNYPDIPGAKEH-------CISSDDIFSLE-KPPGKTLVVGAGYIGKLETW 300 (312)
Q Consensus 235 v~~~~---G~-~~~i~ad~vVlAtG~--~p~~p~~~g~~~~-------~~~~~~~~~~~-~~~~~v~VvG~G~sa~~~a~ 300 (312)
++..+ |+ ..++.||+||+|||+ .|+.|+++|.+.+ ..|+.++.... ..+++|+|||+|+||+|.|.
T Consensus 150 V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~ 229 (447)
T 2gv8_A 150 VTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVR 229 (447)
T ss_dssp EEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHH
T ss_pred EEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHH
Confidence 65544 64 347999999999997 7888999997542 45666655443 36788999999999999999
Q ss_pred HhhcCcee-eeeC
Q psy11185 301 DSNSGCGN-VTIH 312 (312)
Q Consensus 301 ~l~~~~~~-V~~~ 312 (312)
.|+..+++ |+++
T Consensus 230 ~l~~~~~~~V~l~ 242 (447)
T 2gv8_A 230 HLTPVAKHPIYQS 242 (447)
T ss_dssp HHTTTSCSSEEEE
T ss_pred HHHHHhCCcEEEE
Confidence 99999888 8873
No 42
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.63 E-value=5.3e-16 Score=136.01 Aligned_cols=162 Identities=22% Similarity=0.270 Sum_probs=108.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
++|++|||+|++|+.+|..+.+.+.+++++++. .|+.+...... . .+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~----------~gG~~~~~~~~---------------------~-~~~ 48 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER----------FGGQILDTVDI---------------------E-NYI 48 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS----------TTGGGGGCCEE---------------------C-CBT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC----------CCceecccccc---------------------c-ccc
Confidence 369999999999999999999999999888642 23322211000 0 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEeeC-----CeEEEEecCCCeEEEEcCeEEEccCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFIDQ-----HSVEATMKNGEKKTLTAENILIATGG 256 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~~-----~~~~v~~~~G~~~~i~ad~vVlAtG~ 256 (312)
. ....+...+..+ +...+...++++..+ .+..++. ..+.+++.+| .++.||+||+|||+
T Consensus 49 ~--~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 49 S--VPKTEGQKLAGA-----------LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG--AVLKARSIIVATGA 113 (310)
T ss_dssp T--BSSEEHHHHHHH-----------HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS--CEEEEEEEEECCCE
T ss_pred C--cCCCCHHHHHHH-----------HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC--CEEEeCEEEECcCC
Confidence 0 011222222222 233456678898877 4555542 2577777777 67999999999999
Q ss_pred CCCCCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|..|+++|.+.+ .+...........+++|+|||+|.+|+|.+..|...+.+|++
T Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtl 172 (310)
T 1fl2_A 114 KWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTL 172 (310)
T ss_dssp EECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEE
T ss_pred CcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEE
Confidence 9988899988653 222222222234578999999999999999999998888886
No 43
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.62 E-value=5.9e-15 Score=129.37 Aligned_cols=163 Identities=20% Similarity=0.242 Sum_probs=108.9
Q ss_pred ccEEEEecCcchHHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
+|++|||+|++|+.+|..+.+.+. +++++|+.. .|+.+...... . .++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~---------~gg~~~~~~~~--------------------~--~~~ 50 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM---------PGGQITGSSEI--------------------E--NYP 50 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS---------TTCGGGGCSCB--------------------C--CST
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC---------CCccccccccc--------------------c--cCC
Confidence 689999999999999999999999 999999741 23322221110 0 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. +..++...+..++ ...+.+.++++....+..++ ...+.+++.+| .++.||+||+|||+.|+.
T Consensus 51 ~~-~~~~~~~~~~~~l-----------~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 51 GV-KEVVSGLDFMQPW-----------QEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDG--KTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp TC-CSCBCHHHHHHHH-----------HHHHHTTSCEEECSCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCEEECC
T ss_pred CC-cccCCHHHHHHHH-----------HHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCC--CEEECCEEEECCCCCCCC
Confidence 00 1123333333332 22345568888765544333 45567777777 579999999999999999
Q ss_pred CCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|.+.+ .+...........+++|+|||+|.+|+|.|..|...+.+|++
T Consensus 117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtl 171 (311)
T 2q0l_A 117 TGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYL 171 (311)
T ss_dssp CCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 999987532 222222222234568999999999999999999988888886
No 44
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.61 E-value=8.2e-15 Score=128.78 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=108.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+. ..+.|...... + .++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~----~gg~~~~~~~~--------------------------~--~~~ 62 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET----PGGQLTEAGIV--------------------------D--DYL 62 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS----TTGGGGGCCEE--------------------------C--CST
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc----CCCeecccccc--------------------------c--ccC
Confidence 589999999999999999999999999999974 11222111100 0 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
. ........+..+ +...+.+.++++....+..++ ...+.+++.+| .++.||+||+|||+.|+.
T Consensus 63 ~--~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~ 127 (323)
T 3f8d_A 63 G--LIEIQASDMIKV-----------FNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRK--GEFKADSVILGIGVKRRK 127 (323)
T ss_dssp T--STTEEHHHHHHH-----------HHHHHHTTTCCEEESCEEEEEEC--CEEEEESSS--CEEEEEEEEECCCCEECC
T ss_pred C--CCCCCHHHHHHH-----------HHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCC--CEEEcCEEEECcCCCCcc
Confidence 0 001122222222 223455668888765555443 33577888777 689999999999999999
Q ss_pred CCCCCCCcc---ee-ccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEH---CI-SSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~---~~-~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|...+ .. ...........+++++|||+|.+|++.+..|...+.+|++
T Consensus 128 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~ 182 (323)
T 3f8d_A 128 LGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYL 182 (323)
T ss_dssp CCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEE
T ss_pred CCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEE
Confidence 999998653 12 2222222334678999999999999999998888878876
No 45
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.60 E-value=1.3e-14 Score=134.41 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=63.9
Q ss_pred eEEEEecC---CCeEEEEcCeEEEccC--CCCCCCCCCCCCcc---eeccccccCCC-CCCCeEEEEcCchhhHHHHHHh
Q psy11185 232 SVEATMKN---GEKKTLTAENILIATG--GRPNYPDIPGAKEH---CISSDDIFSLE-KPPGKTLVVGAGYIGKLETWDS 302 (312)
Q Consensus 232 ~~~v~~~~---G~~~~i~ad~vVlAtG--~~p~~p~~~g~~~~---~~~~~~~~~~~-~~~~~v~VvG~G~sa~~~a~~l 302 (312)
.|+++..+ |+..++.||+||+||| +.|+.|++||.+.+ ..++.++.... ..+++|+|||+|.||+|.|..|
T Consensus 137 ~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l 216 (464)
T 2xve_A 137 TFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQC 216 (464)
T ss_dssp EEEEEEEETTTTEEEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHH
T ss_pred cEEEEEEEcCCCceEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHH
Confidence 45555433 5446799999999999 78999999998764 45666665543 4678999999999999999999
Q ss_pred hcCceeeee
Q psy11185 303 NSGCGNVTI 311 (312)
Q Consensus 303 ~~~~~~V~~ 311 (312)
+..+++|++
T Consensus 217 ~~~g~~V~l 225 (464)
T 2xve_A 217 YKYGAKKLI 225 (464)
T ss_dssp HHTTCSEEE
T ss_pred HHhCCeEEE
Confidence 999889886
No 46
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.60 E-value=5.5e-16 Score=140.26 Aligned_cols=159 Identities=21% Similarity=0.320 Sum_probs=106.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
...++|||+|++|+.+|..+...+.+++++++..... | + .+ .+. ..+ .+. ..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~----y---~----~~----~l~-------~~l-----~g~-~~ 60 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP----Y---Y----RP----RLN-------EII-----AKN-KS 60 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC----B---C----GG----GHH-------HHH-----HSC-CC
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC----c---c----cC----hhh-------HHH-----cCC-CC
Confidence 4589999999999999999977777899998754211 0 0 00 000 000 010 00
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
. ...... ....+.+.++++..++ +..++....++++.+| .++.||+||+|||+.|+.|
T Consensus 61 ~-~~l~~~------------------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 61 I-DDILIK------------------KNDWYEKNNIKVITSEFATSIDPNNKLVTLKSG--EKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp G-GGTBSS------------------CHHHHHHTTCEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCC
T ss_pred H-HHccCC------------------CHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEecCCCcCCC
Confidence 0 000000 1123456689988664 6666665556777888 6899999999999999999
Q ss_pred CCCCCCcceec---cccccCCCC---CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 262 DIPGAKEHCIS---SDDIFSLEK---PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 262 ~~~g~~~~~~~---~~~~~~~~~---~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
++||.+ ..++ .++...+.. .+++|+|||+|.+|+|+|..|...+.+|++
T Consensus 120 ~i~G~~-~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtv 174 (385)
T 3klj_A 120 KVPHAD-EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASI 174 (385)
T ss_dssp CCTTCS-CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCC-CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 999986 3333 333333322 268999999999999999999988888886
No 47
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.59 E-value=9.5e-15 Score=137.91 Aligned_cols=181 Identities=14% Similarity=0.195 Sum_probs=113.9
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccc---ccc---chhhHHHHHHHHHHHHHHH
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVN---VGC---IPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~---~~~---~~~~~~~~a~~~~~~~~~~ 174 (312)
...+|+||||+|++|+.+|..|.+.+.+++++|+... .|+.+.. .++ .+......... ..+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~--------~GGtw~~~~ypg~~~dv~s~~y~~~f~--~~~~-- 86 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASG--------VGGVWYWNRYPGARCDVESIDYSYSFS--PELE-- 86 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS--------SCTHHHHCCCTTCBCSSCTTTSSCCSC--HHHH--
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCC--------CCCccccCCCCCceeCCCchhcccccc--cccc--
Confidence 3468999999999999999999999999999997542 2222210 011 11110000000 0000
Q ss_pred HHcCCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCc--eEEec-eeEEe----eCCeEEEEecCCCeEEEEc
Q psy11185 175 VAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKV--DYLNA-LGKFI----DQHSVEATMKNGEKKTLTA 247 (312)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV--~~~~~-~~~~~----~~~~~~v~~~~G~~~~i~a 247 (312)
..+.+. ....+...+..++....+. .++ .+... .+..+ +...+++++.+| .++.|
T Consensus 87 ~~~~~~-----~~~~~~~ei~~yl~~~~~~-----------~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--~~i~a 148 (549)
T 4ap3_A 87 QEWNWS-----EKYATQPEILAYLEHVADR-----------FDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--DEVSA 148 (549)
T ss_dssp HHCCCS-----SSSCBHHHHHHHHHHHHHH-----------TTCGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEE
T ss_pred cCCCCc-----cCCCCHHHHHHHHHHHHHH-----------cCCCccEEECCEEEEEEEcCCCCEEEEEECCC--CEEEe
Confidence 012211 2344555665555444332 232 22212 12221 224688888888 57999
Q ss_pred CeEEEccC--CCCCCCCCCCCCcc---eecccccc--CCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 248 ENILIATG--GRPNYPDIPGAKEH---CISSDDIF--SLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 248 d~vVlAtG--~~p~~p~~~g~~~~---~~~~~~~~--~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+||+||| +.|+.|++||.+.+ .+|+.... .....+++|+|||+|.||+|.+..|...+++||+
T Consensus 149 d~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv 219 (549)
T 4ap3_A 149 RFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFV 219 (549)
T ss_dssp EEEEECCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEE
T ss_pred CEEEECcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEE
Confidence 99999999 78999999998765 34554433 4556788999999999999999999988888886
No 48
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.59 E-value=1.1e-14 Score=128.82 Aligned_cols=171 Identities=15% Similarity=0.131 Sum_probs=111.3
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
...+|++|||+|++|+.+|..|.+.+.+++++|+.... -+..|+.+...... ..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~----~~~~gg~~~~~~~~--------------------~~-- 73 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMAN----GIAAGGQLTTTTEI--------------------EN-- 73 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBT----TBCTTCGGGGSSEE--------------------CC--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCC----CCCcCcccccchhh--------------------cc--
Confidence 45689999999999999999999999999999985411 11233322111000 00
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEec---CCCeEEEEcCeEEEccC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMK---NGEKKTLTAENILIATG 255 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~---~G~~~~i~ad~vVlAtG 255 (312)
++.. +..+....+..+ +...+...++++..+++..++ .+.+.+.+. ++ ..+.+|.||+|||
T Consensus 74 ~~~~-~~~~~~~~~~~~-----------~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~--~~~~~d~vvlAtG 139 (338)
T 3itj_A 74 FPGF-PDGLTGSELMDR-----------MREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDA--EPVTTDAIILATG 139 (338)
T ss_dssp STTC-TTCEEHHHHHHH-----------HHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSS--CCEEEEEEEECCC
T ss_pred cCCC-cccCCHHHHHHH-----------HHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCC--cEEEeCEEEECcC
Confidence 0000 011222223222 233455668888777654443 345666653 44 6789999999999
Q ss_pred CCCCCCCCCCCCcc----eeccccccCC--CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 256 GRPNYPDIPGAKEH----CISSDDIFSL--EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 256 ~~p~~p~~~g~~~~----~~~~~~~~~~--~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|+.|+++|...+ ..+....... ...+++++|||+|.+|++.+..|...+.+|++
T Consensus 140 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~ 201 (338)
T 3itj_A 140 ASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFM 201 (338)
T ss_dssp EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEE
T ss_pred CCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 99999999997543 2222222222 34578899999999999999999998888886
No 49
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.58 E-value=3.5e-15 Score=140.29 Aligned_cols=163 Identities=22% Similarity=0.267 Sum_probs=110.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+.+.+++++++. .|+.+......+ .+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~----------~GG~~~~~~~~~----------------------~~ 258 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER----------FGGQVLDTVDIE----------------------NY 258 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------TTGGGTTCSCBC----------------------CB
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC----------CCCccccccccc----------------------cc
Confidence 3689999999999999999999999999888752 233222111000 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEeeC-----CeEEEEecCCCeEEEEcCeEEEccC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFIDQ-----HSVEATMKNGEKKTLTAENILIATG 255 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~~-----~~~~v~~~~G~~~~i~ad~vVlAtG 255 (312)
.. ....+...+..+ +...+...+++++.+ .+..++. ..+.+++.+| ..+.||+||+|||
T Consensus 259 ~~--~~~~~~~~l~~~-----------l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g--~~~~~d~vVlAtG 323 (521)
T 1hyu_A 259 IS--VPKTEGQKLAGA-----------LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG--AVLKARSIIIATG 323 (521)
T ss_dssp TT--BSSBCHHHHHHH-----------HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS--CEEEEEEEEECCC
T ss_pred CC--CCCCCHHHHHHH-----------HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC--CEEEcCEEEECCC
Confidence 00 001222222222 234456778998877 4555542 2577888888 6899999999999
Q ss_pred CCCCCCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 256 GRPNYPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 256 ~~p~~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|+.|++||...+ ...+.........+++|+|||+|++|+|+|..|...+.+|++
T Consensus 324 ~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtl 383 (521)
T 1hyu_A 324 AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTL 383 (521)
T ss_dssp EEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEE
T ss_pred CCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEE
Confidence 99998999998654 122222222224578999999999999999999988888886
No 50
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.58 E-value=9.1e-14 Score=123.73 Aligned_cols=178 Identities=17% Similarity=0.264 Sum_probs=108.2
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+.... .+.|......... ..+... ....++..+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~--gg~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~ 66 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASP--GGAWQHAWHSLHL-FSPAGW-------------SSIPGWPMP 66 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSS--SGGGGGSCTTCBC-SSCGGG-------------SCCSSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC--CCcccCCCCCcEe-cCchhh-------------hhCCCCCCC
Confidence 479999999999999999999999999999975421 1111110000000 000000 000011111
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEe--eCCeEE-EEecCCCeEEEEcCeEEEccC--C
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFI--DQHSVE-ATMKNGEKKTLTAENILIATG--G 256 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~--~~~~~~-v~~~~G~~~~i~ad~vVlAtG--~ 256 (312)
......+....+..++. ..+...++++..++ +..+ +...+. +++.+| ++.||+||+||| +
T Consensus 67 ~~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 67 ASQGPYPARAEVLAYLA-----------QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR---QWLARAVISATGTWG 132 (357)
T ss_dssp CCSSSSCBHHHHHHHHH-----------HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC---EEEEEEEEECCCSGG
T ss_pred CCccCCCCHHHHHHHHH-----------HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC---EEEeCEEEECCCCCC
Confidence 11122233334443332 33445577775543 3332 345677 888777 799999999999 4
Q ss_pred CCCCCCCCCCCcc---eeccccccC-CCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGAKEH---CISSDDIFS-LEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~~~~---~~~~~~~~~-~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+.|+++|...+ ..++..+.. ....+++|+|||+|.+|+|.|..|...+ +|++
T Consensus 133 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~ 190 (357)
T 4a9w_A 133 EAYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTW 190 (357)
T ss_dssp GBCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEE
T ss_pred CCCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEE
Confidence 6777999998654 234433333 3345688999999999999999998887 4765
No 51
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.58 E-value=1.5e-15 Score=139.70 Aligned_cols=143 Identities=14% Similarity=0.151 Sum_probs=111.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+|+++.+.+.+.|+++||++++++++++++.. .+.+.++
T Consensus 157 ~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~-----~v~~~~g------- 224 (437)
T 4eqs_A 157 YVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN-----EITFKSG------- 224 (437)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT-----EEEETTS-------
T ss_pred cchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCC-----eeeecCC-------
Confidence 5899999999999999999999 59999999999999999999999999999999988532 5777665
Q ss_pred CccccccEEEEecCcch-HHHH-HHHHHCCC-cEEEEeccCCCCCCcccccCCccccccc-----chhhHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAA-KEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGC-----IPKKLMHQAALLGEA 170 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a-~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~-----~~~~~~~~a~~~~~~ 170 (312)
..+++|.||++.|+.. .... ....+.+. ..+.+|++++|+.|+|||+||++..... ......+.+..+++.
T Consensus 225 -~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~ 303 (437)
T 4eqs_A 225 -KVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASI 303 (437)
T ss_dssp -CEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHH
T ss_pred -eEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHH
Confidence 5789999999999522 1111 11112222 3588899999999999999997654321 122456777888888
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 304 ~a~ni 308 (437)
T 4eqs_A 304 VAEQI 308 (437)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 52
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.57 E-value=1.2e-14 Score=128.84 Aligned_cols=165 Identities=19% Similarity=0.194 Sum_probs=107.4
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|... .|+.+...... . .+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~---------~gg~~~~~~~~--------------------~--~~ 61 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS---------FGGALMTTTDV--------------------E--NY 61 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS---------CSCGGGSCSCB--------------------C--CS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC---------CCCceeccchh--------------------h--hc
Confidence 46899999999999999999999999999999531 22222111000 0 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeC-CeEEE-EecCCCeEEEEcCeEEEccCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQ-HSVEA-TMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~-~~~~v-~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
+.. +..++...+..++ ...+...++++..+++..++. ..+++ .+.+| .++.||+||+|||+.|.
T Consensus 62 ~~~-~~~~~~~~~~~~l-----------~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g--~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 62 PGF-RNGITGPELMDEM-----------REQALRFGADLRMEDVESVSLHGPLKSVVTADG--QTHRARAVILAMGAAAR 127 (335)
T ss_dssp TTC-TTCBCHHHHHHHH-----------HHHHHHTTCEEECCCEEEEECSSSSEEEEETTS--CEEEEEEEEECCCEEEC
T ss_pred CCC-CCCCCHHHHHHHH-----------HHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCC--CEEEeCEEEECCCCCcc
Confidence 000 0112233333222 223445688887766544442 33455 56667 67999999999999999
Q ss_pred CCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|...+ .++..........+++|+|||+|.+|+|.+..|...+.+|++
T Consensus 128 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l 183 (335)
T 2a87_A 128 YLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTL 183 (335)
T ss_dssp CCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEE
T ss_pred CCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEE
Confidence 9989886542 222222222224578999999999999999999988888886
No 53
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.56 E-value=6.1e-14 Score=122.82 Aligned_cols=164 Identities=18% Similarity=0.213 Sum_probs=108.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEE-EeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIV-LDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~-ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.+|++|||+|++|+.+|..+.+.+.++++ +|+.. .|+.+...... . .+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~---------~gG~~~~~~~~---------------------~-~~ 52 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM---------PGGQITSSSEI---------------------E-NY 52 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS---------TTGGGGGCSCB---------------------C-CS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC---------CCceeeeecee---------------------c-cC
Confidence 47999999999999999999999999888 98722 23322221100 0 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEe-eC--CeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFI-DQ--HSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~-~~--~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
+. .+.......+..++ ...+...++++..+.+..+ +. ..+.++..++. ++.+|+||+|||+.|
T Consensus 53 ~~-~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 53 PG-VAQVMDGISFMAPW-----------SEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK--TELAKAVIVCTGSAP 118 (315)
T ss_dssp TT-CCSCBCHHHHHHHH-----------HHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC--EEEEEEEEECCCEEE
T ss_pred CC-CCCCCCHHHHHHHH-----------HHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC--EEEeCEEEEeeCCCC
Confidence 00 01122333333332 2345667888877665444 33 44664333332 899999999999999
Q ss_pred CCCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|+++|...+ .++..........+++++|||+|.+|++.+..|...+.+|++
T Consensus 119 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~ 175 (315)
T 3r9u_A 119 KKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYL 175 (315)
T ss_dssp CCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEE
Confidence 99999998653 223333333345678999999999999999999988888876
No 54
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.56 E-value=8e-14 Score=122.66 Aligned_cols=163 Identities=20% Similarity=0.213 Sum_probs=106.4
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+.. .|+.+....... .+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~---------~gg~~~~~~~~~----------------------~~ 63 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV---------AGGLTAEAPLVE----------------------NY 63 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS---------TTGGGGGCSCBC----------------------CB
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC---------CCccccccchhh----------------------hc
Confidence 46899999999999999999999999999999732 233222211000 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
+. ...++...+..+ +...+...++++.......++ ...+.+.+ ++ .++.||+||+|||+.|+
T Consensus 64 ~~--~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 64 LG--FKSIVGSELAKL-----------FADHAANYAKIREGVEVRSIKKTQGGFDIET-ND--DTYHAKYVIITTGTTHK 127 (319)
T ss_dssp TT--BSSBCHHHHHHH-----------HHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SS--SEEEEEEEEECCCEEEC
T ss_pred CC--CcccCHHHHHHH-----------HHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CC--CEEEeCEEEECCCCCcc
Confidence 00 001122222222 223445668887665544333 44566666 44 47899999999999999
Q ss_pred CCCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|...+ .............+++++|||+|.+|+|.+..|...+.+|++
T Consensus 128 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~ 183 (319)
T 3cty_A 128 HLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTI 183 (319)
T ss_dssp CCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEE
T ss_pred cCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEE
Confidence 9999887543 111222222234568999999999999999999988888876
No 55
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.55 E-value=6.6e-14 Score=123.84 Aligned_cols=169 Identities=15% Similarity=0.104 Sum_probs=108.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+..... +..|+.+...... .. .
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~----~~~gg~~~~~~~~--------------------~~--~ 60 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMAND----IAPGGQLTTTTDV--------------------EN--F 60 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTT----BCTTCGGGGCSEE--------------------CC--S
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccc----cCCCceeeecccc--------------------cc--C
Confidence 35799999999999999999999999999999732110 1122222111000 00 0
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
+.. +..++...+..+ +...+...++++..+++..++ ...+++++ +| .++.+|.||+|||++|.
T Consensus 61 ~~~-~~~~~~~~~~~~-----------l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 61 PGF-PEGILGVELTDK-----------FRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DS--KAILADAVILAIGAVAK 125 (333)
T ss_dssp TTC-TTCEEHHHHHHH-----------HHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SS--EEEEEEEEEECCCEEEC
T ss_pred CCC-ccCCCHHHHHHH-----------HHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CC--cEEEcCEEEECCCCCcC
Confidence 000 011222222222 223345668888776644443 34566766 66 68999999999999999
Q ss_pred CCCCCCCCc----c----eeccccccCCC--CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKE----H----CISSDDIFSLE--KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~----~----~~~~~~~~~~~--~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|... + .++........ ..+++|+|||+|.+|+|.+..|...+.+|++
T Consensus 126 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~l 187 (333)
T 1vdc_A 126 RLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYI 187 (333)
T ss_dssp CCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEE
T ss_pred CCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEE
Confidence 999998765 2 11222222222 4678999999999999999999988888886
No 56
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.55 E-value=1.2e-15 Score=137.17 Aligned_cols=158 Identities=21% Similarity=0.302 Sum_probs=103.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
...|++|||+|++|+.+|..+.+.+ +++++|+..... | ..+. +.. .+ .+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~----~-------~~~~----l~~-------~~-----~g~-- 56 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY----Y-------SKPM----LSH-------YI-----AGF-- 56 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC----C-------CSTT----HHH-------HH-----TTS--
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc----c-------ccch----hHH-------HH-----hCC--
Confidence 3579999999999999999999888 999999754211 0 0000 000 00 010
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.+++.+... ....+...+++++.++ +..++...+.++ .+| .++.||+||+|||+.|+.
T Consensus 57 -------~~~~~~~~~-----------~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g--~~~~~d~lViATGs~p~~ 115 (367)
T 1xhc_A 57 -------IPRNRLFPY-----------SLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEK--GEVPYDTLVLATGARARE 115 (367)
T ss_dssp -------SCGGGGCSS-----------CHHHHHHHTEEEECSCCEEEEETTTTEEE-ESS--CEEECSEEEECCCEEECC
T ss_pred -------CCHHHhccC-----------CHHHHHhCCcEEEECCEEEEEECCCCEEE-ECC--cEEECCEEEECCCCCCCC
Confidence 011110000 0112345688988775 666665555565 566 579999999999999999
Q ss_pred CCCCCCCcceecc---ccccCCCC---CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEHCISS---DDIFSLEK---PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~~~~~---~~~~~~~~---~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|++||.+ ..+++ .++..+.. .+++++|||+|.+|+|.|..|...+.+|++
T Consensus 116 p~i~G~~-~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 171 (367)
T 1xhc_A 116 PQIKGKE-YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKL 171 (367)
T ss_dssp CCSBTGG-GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcC-CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 9999843 33333 33332221 348999999999999999999988888886
No 57
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.54 E-value=6.9e-14 Score=129.53 Aligned_cols=189 Identities=15% Similarity=0.164 Sum_probs=103.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCC-----CcEEEEeccCCCCCC-cccccCCcccccc--------cchhhHHHHH---H
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG-----RKVIVLDYVIPSPQG-TTWGLGGTCVNVG--------CIPKKLMHQA---A 165 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~-----~~~~~ve~~~~~~~~-~v~a~Gd~~~~~~--------~~~~~~~~~a---~ 165 (312)
.+|++|||+|++|+.+|..+.+.+ .+++++|+.....+. +.+..+- ..... ..|....... .
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQS-ELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSC-BCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCC-cCCcchhhccccccCCCCCCChhHhhh
Confidence 579999999999999999999888 899999986643311 1111110 00000 0010000000 0
Q ss_pred HHHHHHHHHHHcCCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEee-----C--CeEEEEe
Q psy11185 166 LLGEAIKDAVAYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFID-----Q--HSVEATM 237 (312)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~-----~--~~~~v~~ 237 (312)
.... +.....+. ...+....+..++. ..+...++++..++ +..++ . |.+++++
T Consensus 109 ~~~~-~~~~~~~~-------~~~~~~~~~~~~l~-----------~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~ 169 (463)
T 3s5w_A 109 KHDR-LVDFINLG-------TFYPCRMEFNDYLR-----------WVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVIS 169 (463)
T ss_dssp HTTC-HHHHHHHC-------CSCCBHHHHHHHHH-----------HHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEE
T ss_pred hcCc-eeeccccc-------CCCCCHHHHHHHHH-----------HHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEE
Confidence 0000 00000011 12223333333332 22334455554433 33222 1 2246665
Q ss_pred cCC--CeEEEEcCeEEEccCCCCCCCC-CCCCCc--ceeccccccC-CCC------CCCeEEEEcCchhhHHHHHHhhcC
Q psy11185 238 KNG--EKKTLTAENILIATGGRPNYPD-IPGAKE--HCISSDDIFS-LEK------PPGKTLVVGAGYIGKLETWDSNSG 305 (312)
Q Consensus 238 ~~G--~~~~i~ad~vVlAtG~~p~~p~-~~g~~~--~~~~~~~~~~-~~~------~~~~v~VvG~G~sa~~~a~~l~~~ 305 (312)
.+| +..++.||+||+|||+.|.+|+ +++... ...++..+.. ... .+++|+|||+|.||+|++..|...
T Consensus 170 ~~g~g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~ 249 (463)
T 3s5w_A 170 RNADGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDS 249 (463)
T ss_dssp EETTSCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHH
T ss_pred ecCCCceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhc
Confidence 544 3448999999999999988877 333322 3344433322 222 467899999999999999998887
Q ss_pred --ceeeee
Q psy11185 306 --CGNVTI 311 (312)
Q Consensus 306 --~~~V~~ 311 (312)
+.+|++
T Consensus 250 ~~~~~Vt~ 257 (463)
T 3s5w_A 250 YPSVQADM 257 (463)
T ss_dssp CTTEEEEE
T ss_pred CCCCeEEE
Confidence 778876
No 58
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.54 E-value=4.2e-14 Score=124.34 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=105.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|... .|+.+...... . .++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~---------~gg~~~~~~~~--------------------~--~~~ 53 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME---------KGGQLTTTTEV--------------------E--NWP 53 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS---------TTGGGGGCSBC--------------------C--CST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC---------CCceEecchhh--------------------h--hCC
Confidence 5799999999999999999999999999999531 22222111000 0 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. +..+....+..++ ...+...++++..+++..++ ...+++ ..+| .++.||+||+|||+.|..
T Consensus 54 ~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~--~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 54 GD-PNDLTGPLLMERM-----------HEHATKFETEIIFDHINKVDLQNRPFRL-NGDN--GEYTCDALIIATGASARY 118 (320)
T ss_dssp TC-CSSCBHHHHHHHH-----------HHHHHHTTCEEECCCEEEEECSSSSEEE-EESS--CEEEEEEEEECCCEEECC
T ss_pred CC-CCCCCHHHHHHHH-----------HHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCC--CEEEcCEEEECCCCCcCC
Confidence 00 0112223332222 23345568888777655444 334555 5566 579999999999999988
Q ss_pred CCCCCCCcc----eeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEH----CISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~----~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+++|...+ .++..........+++|+|||+|.+|+|.+..|...+.+|++
T Consensus 119 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtl 173 (320)
T 1trb_A 119 LGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHL 173 (320)
T ss_dssp CCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEE
T ss_pred CCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 888886432 222222222224678999999999999999999998888886
No 59
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.54 E-value=2.3e-14 Score=133.55 Aligned_cols=149 Identities=39% Similarity=0.605 Sum_probs=113.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNT 99 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (312)
.+|+|+|..|+++|.+||+++++++|+.+++++.+.+.+.|+++||++++++.+.+++...++.+.+.+.++..+..
T Consensus 197 ~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~--- 273 (483)
T 3dgh_A 197 YIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEE--- 273 (483)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCE---
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCce---
Confidence 58999999999999999999998889999999999999999999999999999999987555556777776532111
Q ss_pred ccccccEEEEecCcch----HHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHH
Q psy11185 100 HKYDYDLLVLGGGSGG----LAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 100 ~~~~~d~vivg~G~~g----l~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~ 175 (312)
..+++|.||++.|... +.+.....+.+...+.+|..++|+.|+|||+||++...+ ...+.+..++..+..+.
T Consensus 274 ~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~----~~~~~A~~~g~~aa~~i 349 (483)
T 3dgh_A 274 SEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDIIYGKP----ELTPVAVLAGRLLARRL 349 (483)
T ss_dssp EEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCCTTCBCSSTTEEECSTTBTTSC----CCHHHHHHHHHHHHHHH
T ss_pred eEEEcCEEEECcccccCcCcCCchhcCccccCCEEEECcCCccCCCCEEEEEcccCCCC----ccHHHHHHHHHHHHHHH
Confidence 3688999999999522 111111112222457788889999999999999754322 34456677777777765
No 60
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.54 E-value=2e-14 Score=134.45 Aligned_cols=123 Identities=17% Similarity=0.321 Sum_probs=97.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+|+++.+.+.+.|+++||++++++.+++++...++.+.+.+.++
T Consensus 186 ~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g------- 258 (500)
T 1onf_A 186 YIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDG------- 258 (500)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTS-------
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCC-------
Confidence 5899999999999999999999 59999999999999999999999999999999999865444356666554
Q ss_pred Ccc-ccccEEEEecCcch----HHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcc
Q psy11185 99 THK-YDYDLLVLGGGSGG----LAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTC 150 (312)
Q Consensus 99 ~~~-~~~d~vivg~G~~g----l~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~ 150 (312)
+. +++|.||++.|... +.+.....+.....+.+|..++|+.|+|||+||++
T Consensus 259 -~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~t~~~~iya~GD~~ 314 (500)
T 1onf_A 259 -RIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCC 314 (500)
T ss_dssp -CEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCBCSSSSEEECSTTE
T ss_pred -cEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCcccCCCCEEEEeccc
Confidence 34 89999999999532 21111111122234778888999999999999976
No 61
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.53 E-value=2.1e-14 Score=132.57 Aligned_cols=143 Identities=22% Similarity=0.347 Sum_probs=110.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|++.||++++++.+++++.++++.+.+.+.++
T Consensus 177 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g------- 249 (450)
T 1ges_A 177 YIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDG------- 249 (450)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTS-------
T ss_pred HHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCC-------
Confidence 5899999999999999999999 58899999999999999999999999999999999865444356666554
Q ss_pred CccccccEEEEecCcch----HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG----LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g----l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..+++|.||++.|... +.+.....+.+ ...+.+|..++|+.|+|||+||++... ...+.+..+++.+..
T Consensus 250 -~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~ 323 (450)
T 1ges_A 250 -RSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAV-----ELTPVAVAAGRRLSE 323 (450)
T ss_dssp -CEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTSC-----CCHHHHHHHHHHHHH
T ss_pred -cEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCCC-----ccHHHHHHHHHHHHH
Confidence 4689999999999521 21222222223 234778888899999999999965432 244566777777766
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 324 ~i 325 (450)
T 1ges_A 324 RL 325 (450)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 62
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.53 E-value=1.6e-14 Score=134.59 Aligned_cols=145 Identities=18% Similarity=0.194 Sum_probs=109.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEee-ccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKN-VAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~-~~~~~~~ 97 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|+++||++++++.+.+++.+++ .+.+.+.+ ++.
T Consensus 195 ~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~~~~---- 269 (482)
T 1ojt_A 195 IIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED-GVYVTFEGANAP---- 269 (482)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT-EEEEEEESSSCC----
T ss_pred HHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC-eEEEEEeccCCC----
Confidence 5899999999999999999999 5999999999999999999999999999999999986433 35666654 110
Q ss_pred CCccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
..++++|.||++.|... .. +.....+.+. ..+.+|.+++|+.|+|||+||++... .+.+.+..+++.+.
T Consensus 270 -g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa 343 (482)
T 1ojt_A 270 -KEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQP-----MLAHKAVHEGHVAA 343 (482)
T ss_dssp -SSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEECGGGTCSS-----CCHHHHHHHHHHHH
T ss_pred -ceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEEEEcccCCC-----ccHHHHHHHHHHHH
Confidence 14678999999999522 11 1111122222 33778888999999999999965432 34556777788777
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 344 ~~i 346 (482)
T 1ojt_A 344 ENC 346 (482)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 63
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.52 E-value=1.1e-13 Score=130.68 Aligned_cols=185 Identities=17% Similarity=0.241 Sum_probs=111.6
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCccccccc---chhhHHHHHHHHHHHHHHHHHcC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGC---IPKKLMHQAALLGEAIKDAVAYG 178 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~ 178 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+... .++.|..+. ..++ .+........ .... ...+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~--~GG~w~~~~---~pg~~~d~~~~~~~~~f-~~~~---~~~~~ 85 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD--VGGVWYWNR---YPGARCDIESIEYCYSF-SEEV---LQEWN 85 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS--SCTHHHHCC---CTTCBCSSCTTTSSCCS-CHHH---HHHCC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC--CCCcccccC---CCceeeccccccccccc-Chhh---hhccC
Confidence 368999999999999999999999999999997543 122221110 0000 0000000000 0000 01122
Q ss_pred CccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEe----eCCeEEEEecCCCeEEEEcCeEEEc
Q psy11185 179 WEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFI----DQHSVEATMKNGEKKTLTAENILIA 253 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~----~~~~~~v~~~~G~~~~i~ad~vVlA 253 (312)
+. ...++...+..++....+.+.. ++.+..++ +..+ +...+++++.+| .++.||.||+|
T Consensus 86 ~~-----~~~~~~~~i~~yl~~~~~~~~l---------~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~vV~A 149 (542)
T 1w4x_A 86 WT-----ERYASQPEILRYINFVADKFDL---------RSGITFHTTVTAAAFDEATNTWTVDTNHG--DRIRARYLIMA 149 (542)
T ss_dssp CC-----BSSCBHHHHHHHHHHHHHHTTG---------GGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEEC
T ss_pred cc-----cccCCHHHHHHHHHHHHHHcCC---------CceEEcCcEEEEEEEcCCCCeEEEEECCC--CEEEeCEEEEC
Confidence 11 2344555666655544333221 11221111 1111 124678888888 57999999999
Q ss_pred cC--CCCCCCCCCCCCcc---eecccccc--CCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 254 TG--GRPNYPDIPGAKEH---CISSDDIF--SLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 254 tG--~~p~~p~~~g~~~~---~~~~~~~~--~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|| +.|+.|+++|.+.+ .+|+.... .....+|+|+|||+|.||++.+..+...+.+|++
T Consensus 150 tG~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv 214 (542)
T 1w4x_A 150 SGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFV 214 (542)
T ss_dssp CCSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEE
T ss_pred cCCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEE
Confidence 99 57888999998654 24544443 2455788999999999999999998887878876
No 64
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.52 E-value=2.1e-14 Score=134.15 Aligned_cols=143 Identities=21% Similarity=0.311 Sum_probs=110.3
Q ss_pred hhhhhhhHhhhcc---CCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccc
Q psy11185 20 DSGLECAGFLNGL---GFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~---g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~ 95 (312)
.+|+|+|..|+++ |.+|||+++ +++|+.+|+++.+.+.+.|+++||++++++.+++++.++++.+.+.+.++
T Consensus 201 ~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G---- 276 (495)
T 2wpf_A 201 FISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG---- 276 (495)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTS----
T ss_pred HHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCC----
Confidence 4899999999999 999999999 58999999999999999999999999999999999865444456766654
Q ss_pred cCCCccccccEEEEecCcch----HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSGG----LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~g----l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
..+++|.||++.|... +.+.......+ ...+.+|..++|+.|+|||+||++... ...+.+..+++.
T Consensus 277 ----~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~ 347 (495)
T 2wpf_A 277 ----KTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL-----MLTPVAINEGAA 347 (495)
T ss_dssp ----CEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC-----CCHHHHHHHHHH
T ss_pred ----cEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-----cCHHHHHHHHHH
Confidence 4689999999999521 21211112222 224778888999999999999965321 345667777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 348 aa~~i 352 (495)
T 2wpf_A 348 LVDTV 352 (495)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77765
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.52 E-value=2.9e-13 Score=119.76 Aligned_cols=167 Identities=20% Similarity=0.240 Sum_probs=104.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.+... .|.. .-+..+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~--------~gg~~~~~--~~~~-----------------~~~~~~ 57 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE--------PGGQLTAL--YPEK-----------------YIYDVA 57 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--------SCHHHHHT--CTTS-----------------EECCST
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC--------CCCeeecc--CCCc-----------------eeeccC
Confidence 57999999999999999999999999999997532 12211100 0000 000000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEee--CCeEEEEecCCCeEEEEcCeEEEccCC---
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFID--QHSVEATMKNGEKKTLTAENILIATGG--- 256 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~--- 256 (312)
. ...++...+..+ +...+...++++... .+..++ ...+.+++.+| .++.||+||+|||+
T Consensus 58 ~--~~~~~~~~~~~~-----------l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~ 122 (335)
T 2zbw_A 58 G--FPKVYAKDLVKG-----------LVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQG--NAYTAKAVIIAAGVGAF 122 (335)
T ss_dssp T--CSSEEHHHHHHH-----------HHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCTTSEE
T ss_pred C--CCCCCHHHHHHH-----------HHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCC--CEEEeCEEEECCCCCCC
Confidence 0 011122222222 223344556777544 343332 23677877777 67999999999998
Q ss_pred CCCCCCCCCCCcceec-c-ccccCC-CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGAKEHCIS-S-DDIFSL-EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~~~~~~~-~-~~~~~~-~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|..|+++|.+.+... . ..+... ...+++|+|||+|.+|+|.+..|...+.+|++
T Consensus 123 ~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~ 180 (335)
T 2zbw_A 123 EPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITL 180 (335)
T ss_dssp EECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEE
T ss_pred CCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEE
Confidence 5777888887543210 0 001111 13578999999999999999999988888876
No 66
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.52 E-value=3.3e-14 Score=132.84 Aligned_cols=146 Identities=11% Similarity=0.189 Sum_probs=103.9
Q ss_pred hhhhhhhHhhhccC--------------CeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee
Q psy11185 20 DSGLECAGFLNGLG--------------FNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL 84 (312)
Q Consensus 20 ~ig~E~A~~l~~~g--------------~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~ 84 (312)
.+|+|+|..|++++ .+|||+|+ +++|+.+++++++++.+.|+++||++++++.+++++. ++ +
T Consensus 227 ~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~-~ 303 (502)
T 4g6h_A 227 PTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQ-L 303 (502)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SE-E
T ss_pred cchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeC--Cc-e
Confidence 47899999998765 58999999 6999999999999999999999999999999999853 22 2
Q ss_pred EEEE--eeccccccCCCccccccEEEEecCcchHHHHHHH-H----H-CCCcEEEEeccCCC-CCCcccccCCccccccc
Q psy11185 85 KVQY--KNVAEVRQDNTHKYDYDLLVLGGGSGGLAAAKEA-A----A-HGRKVIVLDYVIPS-PQGTTWGLGGTCVNVGC 155 (312)
Q Consensus 85 ~v~~--~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a~~~-~----~-~~~~~~~ve~~~~~-~~~~v~a~Gd~~~~~~~ 155 (312)
.+.. .++.. ..+++++|.+||++|..+......+ . . ...+.+.+|+.+++ +.|+|||+|||+.. +.
T Consensus 304 ~~~~~~~dg~~----~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~-~~ 378 (502)
T 4g6h_A 304 LAKTKHEDGKI----TEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFA-GL 378 (502)
T ss_dssp EEEEECTTSCE----EEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEES-SS
T ss_pred EEEEEecCccc----ceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCC-CC
Confidence 2222 22211 0146899999999995332211111 1 1 12234777887776 78999999996543 22
Q ss_pred chhhHHHHHHHHHHHHHHHH
Q psy11185 156 IPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 156 ~~~~~~~~a~~~~~~~~~~~ 175 (312)
++..+.+..++..+.++.
T Consensus 379 --p~~a~~A~qqg~~~A~ni 396 (502)
T 4g6h_A 379 --PPTAQVAHQEAEYLAKNF 396 (502)
T ss_dssp --CCCHHHHHHHHHHHHHHH
T ss_pred --CCchHHHHHHHHHHHHHH
Confidence 235566777777777764
No 67
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.52 E-value=4.5e-14 Score=131.76 Aligned_cols=149 Identities=31% Similarity=0.553 Sum_probs=112.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNT 99 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (312)
.+|+|+|..|+++|.+||+++++++|+.+|+++.+.+.+.|+++||++++++.+.+++...++.+.+.+.+...++.
T Consensus 195 ~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~--- 271 (488)
T 3dgz_A 195 YVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKE--- 271 (488)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEE---
T ss_pred HHHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCee---
Confidence 58999999999999999999998889999999999999999999999999999999987545546677765321111
Q ss_pred ccccccEEEEecCcc----hHHHHHHHHHCC--CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 100 HKYDYDLLVLGGGSG----GLAAAKEAAAHG--RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 100 ~~~~~d~vivg~G~~----gl~~a~~~~~~~--~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
.++++|.||++.|.. .+.+.......+ ...+.+|..++|+.|+|||+||++...+ ...+.+..+++.+..
T Consensus 272 ~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~----~~~~~A~~~g~~aa~ 347 (488)
T 3dgz_A 272 DTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRP----ELTPTAIKAGKLLAQ 347 (488)
T ss_dssp EEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBTTCC----CCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEEEeEEecCCCC----cchhHHHHHHHHHHH
Confidence 247899999999952 221222122233 2347788889999999999999764333 344556777777777
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 348 ~i 349 (488)
T 3dgz_A 348 RL 349 (488)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 68
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.51 E-value=4.4e-14 Score=130.99 Aligned_cols=144 Identities=18% Similarity=0.202 Sum_probs=109.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe-eccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK-NVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~-~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|++.||++++++.+++++.+.+. +.+.+. +++.
T Consensus 181 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~---- 255 (464)
T 2a8x_A 181 AIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQ-VTVTVTKDGVA---- 255 (464)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSC-EEEEEESSSCE----
T ss_pred HHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe-EEEEEEcCCce----
Confidence 5899999999999999999999 59999999999999999999999999999999999864333 556664 3321
Q ss_pred CCccccccEEEEecCcch----HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG----LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g----l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
.++++|.||++.|... +.+.......+. ..+.+|..++|+.|+|||+||++... ...+.+..+++.+.
T Consensus 256 --~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa 328 (464)
T 2a8x_A 256 --QELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLL-----QLAHVAEAQGVVAA 328 (464)
T ss_dssp --EEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSS-----CSHHHHHHHHHHHH
T ss_pred --EEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCc-----cCHHHHHHHHHHHH
Confidence 4679999999999521 112222222232 33778888999999999999965432 34456777777777
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 329 ~~i 331 (464)
T 2a8x_A 329 ETI 331 (464)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 69
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.51 E-value=3e-14 Score=132.98 Aligned_cols=143 Identities=27% Similarity=0.365 Sum_probs=110.7
Q ss_pred hhhhhhhHhhhcc---CCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccc
Q psy11185 20 DSGLECAGFLNGL---GFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~---g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~ 95 (312)
.+|+|+|..|+++ |.+||++++ +++|+.+++++.+.+.+.|++.||++++++.+++++.++++.+.+.+.++
T Consensus 197 ~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G---- 272 (490)
T 1fec_A 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESG---- 272 (490)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTS----
T ss_pred HHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCC----
Confidence 4899999999999 999999999 58999999999999999999999999999999999865444456666554
Q ss_pred cCCCccccccEEEEecCcch----HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSGG----LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~g----l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... +.+.....+.+ ...+.+|..++|+.|+|||+||++... ...+.+..+++.
T Consensus 273 ----~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~ 343 (490)
T 1fec_A 273 ----AEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV-----MLTPVAINEGAA 343 (490)
T ss_dssp ----CEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC-----CCHHHHHHHHHH
T ss_pred ----cEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-----cCHHHHHHHHHH
Confidence 4689999999999522 21121112222 234778888999999999999966321 355667777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 344 aa~~i 348 (490)
T 1fec_A 344 FVDTV 348 (490)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77765
No 70
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.51 E-value=6.1e-14 Score=126.07 Aligned_cols=139 Identities=19% Similarity=0.266 Sum_probs=105.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++|+ +++++.+++.+.|++.||++++++++++++. . .+.+.++
T Consensus 153 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~--~v~~~~g------- 219 (367)
T 1xhc_A 153 FIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE---E--GVLTNSG------- 219 (367)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS---S--EEEETTE-------
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe---e--EEEECCC-------
Confidence 4899999999999999999999 58888 9999999999999999999999999998862 2 4666544
Q ss_pred CccccccEEEEecCcc-hHHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSG-GLAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~ 175 (312)
+ +++|.||++.|.. ...+...+ .+.+ +.+.+|..++|+.|+|||+||++...+. +....+.+..++..+..+.
T Consensus 220 -~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~-~~~~~~~A~~qg~~aa~~i 294 (367)
T 1xhc_A 220 -F-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGI-IAGTAKAAMEQARVLADIL 294 (367)
T ss_dssp -E-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTB-CCCSHHHHHHHHHHHHHHH
T ss_pred -E-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCC-CccHHHHHHHHHHHHHHHh
Confidence 4 7899999999952 22222211 2222 2377888899999999999997654321 1234556677777776665
No 71
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.50 E-value=5.7e-14 Score=129.70 Aligned_cols=160 Identities=20% Similarity=0.282 Sum_probs=104.2
Q ss_pred ccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.|++|||+|++|+.+|..+.+. +.+++++|+..... +..|. .|.. +.
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~-------~~~~~----~p~~-----------------~~--- 52 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS-------HAPCG----IPYV-----------------VE--- 52 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc-------cCCcC----Cccc-----------------cC---
Confidence 5899999999999999999887 66899999754211 00000 0000 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHH-hcCCceEEec-eeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVML-RDKKVDYLNA-LGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gV~~~~~-~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
...+...+.. .....+ ...++++..+ .+..++...+.+.+.+| ..++.||+||+|||+.|+
T Consensus 53 -----~~~~~~~~~~-----------~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g-~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 53 -----GLSTPDKLMY-----------YPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGG-EKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp -----------------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSS-EEEEECSEEEECCCEEEC
T ss_pred -----CCCCHHHhhh-----------cCHHHHHHhcCcEEEecCEEEEEecCCCEEEECCc-eEEEEcCEEEECCCCCCC
Confidence 0000000000 000112 4678998877 46667777777877665 357999999999999999
Q ss_pred CCCCCCCCcc-ee---ccccccCC-----CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEH-CI---SSDDIFSL-----EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~-~~---~~~~~~~~-----~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|.+.. .+ +..+...+ ...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 116 ~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 176 (449)
T 3kd9_A 116 VPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTM 176 (449)
T ss_dssp CCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 9999998542 22 22232222 12567999999999999999999888888886
No 72
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.50 E-value=1.3e-14 Score=132.41 Aligned_cols=158 Identities=20% Similarity=0.326 Sum_probs=106.5
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCC--cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
..+|++|||+|++|+.+|..+.+.+. +++++|+..... | +.+ ..+ ... + ... .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~----~---~~~----~~~-~~~---------~-~~~-~-- 60 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP----Y---DRP----PLS-KDF---------M-AHG-D-- 60 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC----B---CSG----GGG-THH---------H-HHC-C--
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc----c---cCC----CCC-HHH---------h-CCC-c--
Confidence 35799999999999999999998877 499999753211 0 000 000 000 0 000 0
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
.. ... +. .+.+.+++++.++ +..++....+++..+| .++.||+||+|||+.|
T Consensus 61 --~~--~~~----------------~~-----~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 61 --AE--KIR----------------LD-----CKRAPEVEWLLGVTAQSFDPQAHTVALSDG--RTLPYGTLVLATGAAP 113 (408)
T ss_dssp --GG--GSB----------------CC-----CTTSCSCEEEETCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEE
T ss_pred --hh--hhh----------------HH-----HHHHCCCEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCC
Confidence 00 000 00 2456789998876 6667655456666777 5899999999999999
Q ss_pred CCCCC-CCCCcce---eccccccCCC---CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDI-PGAKEHC---ISSDDIFSLE---KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~-~g~~~~~---~~~~~~~~~~---~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|++ +|.+... .+.+++..+. ..+++|+|||+|.+|+|.|..|...+.+|++
T Consensus 114 ~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 173 (408)
T 2gqw_A 114 RALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSL 173 (408)
T ss_dssp CCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 99998 9875222 3444443332 2478999999999999999999988888886
No 73
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.50 E-value=1.9e-13 Score=123.63 Aligned_cols=145 Identities=21% Similarity=0.187 Sum_probs=107.0
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCcc-chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRG-FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~-~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++++. +++++.+.+.+.+++.||++++++.+++++.++ +.+.+.+.++
T Consensus 155 ~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~v~~~~g------ 227 (384)
T 2v3a_A 155 LIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EGLEAHLSDG------ 227 (384)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TEEEEEETTS------
T ss_pred HHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CEEEEEECCC------
Confidence 4899999999999999999999 588877 489999999999999999999999999998643 3356666554
Q ss_pred CCccccccEEEEecCcc-hHHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~ 175 (312)
..+++|.||++.|.. ...+...+ ...+.. +.+|..++|+.|+|||+||++...+.. ......+..+++.+..+.
T Consensus 228 --~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~-~~~~~~a~~~g~~~a~~i 303 (384)
T 2v3a_A 228 --EVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGLN-LLYVMPLMACARALAQTL 303 (384)
T ss_dssp --CEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTBC-CCSHHHHHHHHHHHHHHH
T ss_pred --CEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCCC-cchHHHHHHHHHHHHHHh
Confidence 568999999999952 22222211 222323 788888999999999999976432211 112334566677666654
No 74
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.49 E-value=2.8e-14 Score=133.17 Aligned_cols=162 Identities=22% Similarity=0.273 Sum_probs=103.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCC---CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG---RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~---~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
.+|++|||+|++|+.+|..+.+.+ .+++++|+..... ..+| .... ..+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~------------~~~~---~~~~-------------~~~~ 86 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS------------FLGA---GMAL-------------WIGE 86 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS------------BCGG---GHHH-------------HHTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC------------cccc---ccch-------------hhcC
Confidence 579999999999999999998876 7899999754211 0111 0000 0000
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEee--CCeEEEEecCCCeEEEEcCeEEEccCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFID--QHSVEATMKNGEKKTLTAENILIATGG 256 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~ 256 (312)
........... ....+...++++..+. +..++ ...+.+.. +|+..++.||+||+|||+
T Consensus 87 ~~~~~~~~~~~------------------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 87 QIAGPEGLFYS------------------DKEELESLGAKVYMESPVQSIDYDAKTVTALV-DGKNHVETYDKLIFATGS 147 (490)
T ss_dssp SSSCSGGGBSC------------------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCE
T ss_pred ccCCHHHhhhc------------------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEe-CCcEEEEECCEEEECCCC
Confidence 00000000000 1122345688886554 55554 44555542 343367999999999999
Q ss_pred CCCCCCCCCCC-----------c-ceeccc------cccCCC--CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGAK-----------E-HCISSD------DIFSLE--KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~~-----------~-~~~~~~------~~~~~~--~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+.|++||.+ . ..+++. .+.... ..+++|+|||+|.+|+|.|..|...+.+|++
T Consensus 148 ~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtl 222 (490)
T 2bc0_A 148 QPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVL 222 (490)
T ss_dssp EECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 99999999876 1 123222 222222 5688999999999999999999888888886
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.49 E-value=4.2e-13 Score=120.33 Aligned_cols=173 Identities=16% Similarity=0.243 Sum_probs=103.6
Q ss_pred cccEEEEecCcchHHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccc--cccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVN--VGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
.+|++|||+|++|+.+|..+.+.+. +++++|+.. ..+.|..-..... .+... ...++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~---~Gg~~~~~~~~~~~~~~~~~----------------~~~~g~ 64 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT---VGHSFKHWPKSTRTITPSFT----------------SNGFGM 64 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS---TTHHHHTSCTTCBCSSCCCC----------------CGGGTC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC---CCCccccCcccccccCcchh----------------cccCCc
Confidence 4799999999999999999999998 899999753 1111111000000 00000 000111
Q ss_pred -ccCCcc----------ccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEee--CCeEEEEecCCCeEEE
Q psy11185 180 -EIPNVK----------SVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFID--QHSVEATMKNGEKKTL 245 (312)
Q Consensus 180 -~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~--~~~~~v~~~~G~~~~i 245 (312)
.+.... ...++...+.. .+...+...++++..++ +..++ ...+.+++.+| ++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~ 130 (369)
T 3d1c_A 65 PDMNAISMDTSPAFTFNEEHISGETYAE-----------YLQVVANHYELNIFENTVVTNISADDAYYTIATTTE---TY 130 (369)
T ss_dssp CCTTCSSTTCCHHHHHCCSSCBHHHHHH-----------HHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC---CE
T ss_pred hhhhhccccccccccccccCCCHHHHHH-----------HHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC---EE
Confidence 000000 00111122222 22334456688887654 44343 23577777666 58
Q ss_pred EcCeEEEccCCCCCCCCCCCCCcceeccccccCCCC-CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 246 TAENILIATGGRPNYPDIPGAKEHCISSDDIFSLEK-PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 246 ~ad~vVlAtG~~p~~p~~~g~~~~~~~~~~~~~~~~-~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.||+||+|||+++. |.+|+ ....++..+..... ..++|+|||+|.+|+|.|..|...+.+|++
T Consensus 131 ~~d~vVlAtG~~~~-p~ip~--~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~l 194 (369)
T 3d1c_A 131 HADYIFVATGDYNF-PKKPF--KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIAL 194 (369)
T ss_dssp EEEEEEECCCSTTS-BCCCS--SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred EeCEEEECCCCCCc-cCCCC--CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEE
Confidence 89999999998765 55665 33445555544433 456899999999999999999888888886
No 76
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.49 E-value=7.9e-14 Score=129.27 Aligned_cols=144 Identities=18% Similarity=0.200 Sum_probs=109.5
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe-e--ccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK-N--VAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~-~--~~~~~ 95 (312)
.+|+|+|..|+++|.+|||+++ +++++.+++++.+.+.+.|++.||++++++.+++++..+ +.+.+.+. + +.
T Consensus 179 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~~v~~~~~~~g~--- 254 (464)
T 2eq6_A 179 AVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGLHVRLEPAEGGE--- 254 (464)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTCCS---
T ss_pred HHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEEEEEEeecCCCc---
Confidence 5899999999999999999999 589999999999999999999999999999999998643 33556665 3 31
Q ss_pred cCCCccccccEEEEecCcc----hHHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSG----GLAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~----gl~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
..++++|.||++.|.. .+.+.......+. ..+.+|..++|+.|+||++||++... ...+.+..++..
T Consensus 255 ---~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~-----~l~~~A~~~g~~ 326 (464)
T 2eq6_A 255 ---GEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPP-----LLAHKAMREGLI 326 (464)
T ss_dssp ---CEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSS-----CCHHHHHHHHHH
T ss_pred ---eeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCc-----ccHHHHHHHHHH
Confidence 0268999999999952 1112222222222 34778888999999999999965432 345567777887
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 327 aa~~i 331 (464)
T 2eq6_A 327 AAENA 331 (464)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77765
No 77
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.49 E-value=2.1e-14 Score=131.03 Aligned_cols=159 Identities=23% Similarity=0.313 Sum_probs=106.0
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCc--EEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRK--VIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~--~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.+++|||+|++|+.+|..+.+.+.+ ++++++...... + .+..+.. .+ .+...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y-------~----~~~l~~~----------~~-----~g~~~ 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY-------D----RPSLSKA----------VL-----DGSLE 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB-------C----SGGGGTH----------HH-----HTSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc-------C----CccccHH----------Hh-----CCCCC
Confidence 3899999999999999999998876 888887542110 0 0000000 00 00000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.. .. ... ...+...++++..+ .+..++....++.+.+| .++.||+||+|||+.|+.
T Consensus 57 ~~--~~-~~~------------------~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~ 113 (410)
T 3ef6_A 57 RP--PI-LAE------------------ADWYGEARIDMLTGPEVTALDVQTRTISLDDG--TTLSADAIVIATGSRART 113 (410)
T ss_dssp SC--CB-SSC------------------TTHHHHTTCEEEESCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECC
T ss_pred HH--Hh-cCC------------------HHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEccCCcccC
Confidence 00 00 000 01234568999887 56667766566777788 689999999999999999
Q ss_pred CCCCCCCcc-ee---ccccccCC---CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 261 PDIPGAKEH-CI---SSDDIFSL---EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~-~~---~~~~~~~~---~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|++||.+.. .+ +.++...+ ...+++++|||+|.+|+|.|..+...+.+|++
T Consensus 114 ~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtv 171 (410)
T 3ef6_A 114 MALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTI 171 (410)
T ss_dssp CCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 999987532 22 33333322 23578999999999999999999888888886
No 78
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.49 E-value=7.4e-14 Score=129.39 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=109.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|++.||++++++.+++++.+.++ +.+.+.++
T Consensus 176 ~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G------- 247 (463)
T 2r9z_A 176 YIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQG-TTLVAQDG------- 247 (463)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-EEEEETTC-------
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEeCC-------
Confidence 4899999999999999999999 58899999999999999999999999999999999864433 56666554
Q ss_pred Cc-cccccEEEEecCcc----hHHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 99 TH-KYDYDLLVLGGGSG----GLAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 99 ~~-~~~~d~vivg~G~~----gl~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
. ++++|.||++.|.. .+.+.....+.+ ...+.+|..++|+.|+||++||++... ...+.+..+++.+.
T Consensus 248 -~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa 321 (463)
T 2r9z_A 248 -TRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITGRD-----QLTPVAIAAGRRLA 321 (463)
T ss_dssp -CEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGTSC-----CCHHHHHHHHHHHH
T ss_pred -cEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCCCc-----ccHHHHHHHHHHHH
Confidence 4 68999999999952 122222222222 234778888899999999999965432 34456677777777
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 322 ~~i 324 (463)
T 2r9z_A 322 ERL 324 (463)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 79
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.48 E-value=6.5e-14 Score=127.99 Aligned_cols=162 Identities=22% Similarity=0.255 Sum_probs=107.5
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCc--EEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRK--VIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~--~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
..+|+||||+|++|+.+|..+.+.+.+ ++++++........ .+ .+ + ..+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~----------~~-l~-~---------------~~~~~ 60 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYER----------PP-LS-K---------------EYLAR 60 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCS----------GG-GG-T---------------TTTTT
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCc----------cc-CC-H---------------HHHcC
Confidence 357999999999999999999998876 89998754211000 00 00 0 00000
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
.... ...... ....+...++++..+ .+..++.....+.+.+| ..+.||+||+|||+.|
T Consensus 61 ~~~~-~~~~~~------------------~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 61 EKTF-ERICIR------------------PAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDG--SAIEYGKLIWATGGDP 119 (415)
T ss_dssp SSCS-GGGBSS------------------CHHHHHHTTEEEEETCCEEEEETTTTEEEETTS--CEEEEEEEEECCCEEC
T ss_pred CCCH-HHhccC------------------CHHHHHHCCcEEEeCCEEEEEECCCCEEEECCC--CEEEeeEEEEccCCcc
Confidence 0000 000000 112345678998887 46667766666777788 6899999999999999
Q ss_pred CCCCCCCCCcc-ee---ccccccCCC---CC-CCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAKEH-CI---SSDDIFSLE---KP-PGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~~~-~~---~~~~~~~~~---~~-~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|+++|.+.. .+ +.+++..+. .. +++++|||+|.+|+|.+..+...+.+|++
T Consensus 120 ~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtv 180 (415)
T 3lxd_A 120 RRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTL 180 (415)
T ss_dssp CCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 99999987532 22 333333222 22 78999999999999999999888888886
No 80
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.48 E-value=1e-13 Score=128.60 Aligned_cols=145 Identities=15% Similarity=0.168 Sum_probs=108.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHH-hccceEEEeeceeeEEEEcCCCeeEEEEe--eccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEM-AEGGVHFLHKCLPLSVTKLADGKLKVQYK--NVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l-~~~gi~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~~ 95 (312)
.+|+|+|..|+++|.+||++++ +++|+.+++++.+.+.+.| ++.||++++++++++++.++++ +.+.+. +++.
T Consensus 184 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~-- 260 (468)
T 2qae_A 184 VIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-VSLEVEGKNGKR-- 260 (468)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-EEEEEECC---E--
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-EEEEEEcCCCce--
Confidence 5899999999999999999999 5999999999999999999 9999999999999999865433 556665 3311
Q ss_pred cCCCccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... .. +.....+.+. ..+.+|.+++|+.|+|||+||++...+ ...+.+..++..
T Consensus 261 ----~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~----~~~~~A~~~g~~ 332 (468)
T 2qae_A 261 ----ETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGP----MLAHKAEDEGVA 332 (468)
T ss_dssp ----EEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSSC----SCHHHHHHHHHH
T ss_pred ----EEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCCC----ccHhHHHHHHHH
Confidence 3679999999999521 11 2222222232 347788889999999999999665121 345567777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 333 aa~~i 337 (468)
T 2qae_A 333 CAEIL 337 (468)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 81
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.48 E-value=4.7e-13 Score=118.04 Aligned_cols=165 Identities=16% Similarity=0.215 Sum_probs=107.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.+.. .+|.. .-+..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~--------~gG~~~~--~~~~~-----------------~~~~~~ 59 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ--------LGGQLSA--LYPEK-----------------YIYDVA 59 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS--------SCHHHHH--HCTTS-----------------EECCST
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC--------CCceehh--cCCCc-----------------eEeccC
Confidence 57999999999999999999999999999997542 2221100 00000 000011
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEeeC--C-eEEEEecCCCeEEEEcCeEEEccCC--
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFIDQ--H-SVEATMKNGEKKTLTAENILIATGG-- 256 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~~--~-~~~v~~~~G~~~~i~ad~vVlAtG~-- 256 (312)
. ........+..+ +...+.+.++++... .+..++. . .+.+++.+| ++.+|+||+|||+
T Consensus 60 ~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 60 G--FPKIRAQELINN-----------LKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE---THYSKTVIITAGNGA 123 (332)
T ss_dssp T--CSSEEHHHHHHH-----------HHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE---EEEEEEEEECCTTSC
T ss_pred C--CCCCCHHHHHHH-----------HHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC---EEEeCEEEECCCCCc
Confidence 1 001122222222 334455668888653 3444332 2 577888877 3999999999998
Q ss_pred -CCCCCCCCCCCcc---eeccccccCCC-CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 -RPNYPDIPGAKEH---CISSDDIFSLE-KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 -~p~~p~~~g~~~~---~~~~~~~~~~~-~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+.|+++|...+ ..++ .+.... ..+++++|||+|.+|++.+..|...+.+|++
T Consensus 124 ~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~ 182 (332)
T 3lzw_A 124 FKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSI 182 (332)
T ss_dssp CEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEE
T ss_pred CCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEE
Confidence 8888999998653 2333 222222 2478899999999999999999988888876
No 82
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.48 E-value=1.1e-13 Score=128.67 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=109.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+|||+++ +++|+ .+++++.+.+.+.|++.||++++++.+++++.++++.+.+.+.+....
T Consensus 188 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~--- 264 (474)
T 1zmd_A 188 VIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGG--- 264 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSC---
T ss_pred HHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCC---
Confidence 5899999999999999999999 58898 899999999999999999999999999999865433245554321000
Q ss_pred CCccccccEEEEecCcch----HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG----LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g----l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
...++++|.||++.|... +.+.....+.+. ..+.+|..++|+.|+|||+||++... ...+.+..+++.+.
T Consensus 265 ~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa 339 (474)
T 1zmd_A 265 KAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGP-----MLAHKAEDEGIICV 339 (474)
T ss_dssp CCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSSC-----CCHHHHHHHHHHHH
T ss_pred CceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCCC-----ccHHHHHHHHHHHH
Confidence 114689999999999521 112222222232 34778888999999999999965432 34556777788777
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 340 ~~i 342 (474)
T 1zmd_A 340 EGM 342 (474)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 83
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.47 E-value=7e-14 Score=130.11 Aligned_cols=148 Identities=19% Similarity=0.177 Sum_probs=107.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEc-CCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL-ADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|++.||++++++.+++++.. .++.+.+.+.+...+
T Consensus 193 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g--- 269 (478)
T 1v59_A 193 IIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTN--- 269 (478)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTT---
T ss_pred HHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCC---
Confidence 4899999999999999999999 58999999999999999999999999999999999862 233355666521000
Q ss_pred CCccccccEEEEecCcch----HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG----LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g----l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
....+++|.||++.|... +.+.....+.+ ...+.+|+.++|+.|+|||+||++... ...+.+..++..+.
T Consensus 270 ~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa 344 (478)
T 1v59_A 270 KQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGP-----MLAHKAEEEGIAAV 344 (478)
T ss_dssp EEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSC-----CCHHHHHHHHHHHH
T ss_pred CceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEeeccCCCc-----ccHHHHHHHHHHHH
Confidence 014689999999999521 11111112222 233777888999999999999965432 23455666666666
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 345 ~~i 347 (478)
T 1v59_A 345 EML 347 (478)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 84
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.47 E-value=1.5e-13 Score=129.33 Aligned_cols=143 Identities=17% Similarity=0.210 Sum_probs=109.5
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCe---eEEEEeeccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGK---LKVQYKNVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~---~~v~~~~~~~~~ 95 (312)
.+|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++.||++++++.+++++..+++. +.+.+.++
T Consensus 224 ~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G---- 299 (523)
T 1mo9_A 224 KTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG---- 299 (523)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE----
T ss_pred HHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCC----
Confidence 4899999999999999999999 589999999999999999999999999999999998644442 34555444
Q ss_pred cCCCc-cccccEEEEecCcc-hHH-HHHHH-HHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 96 QDNTH-KYDYDLLVLGGGSG-GLA-AAKEA-AAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 96 ~~~~~-~~~~d~vivg~G~~-gl~-~a~~~-~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
. ++++|.||+++|.. ... .+..+ .+.+. ..+.+|.+++|+.|+|||+||++... ...+.+..++..
T Consensus 300 ----~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~ 370 (523)
T 1mo9_A 300 ----EMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGP-----MEMFKARKSGCY 370 (523)
T ss_dssp ----EEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGCSS-----CSHHHHHHHHHH
T ss_pred ----cEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccCCCCEEEEeecCCCc-----ccHHHHHHHHHH
Confidence 3 68999999999952 222 22222 22222 33778888999999999999965432 345567777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 371 aa~~i 375 (523)
T 1mo9_A 371 AARNV 375 (523)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 85
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.47 E-value=6.2e-14 Score=130.50 Aligned_cols=144 Identities=22% Similarity=0.304 Sum_probs=108.5
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCC-eeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADG-KLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~-~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++|+.+++++.+.+.+.|++.||++++++.+++++..+++ .+.+.+.++.
T Consensus 195 ~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~----- 269 (479)
T 2hqm_A 195 YIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSK----- 269 (479)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSC-----
T ss_pred HHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCc-----
Confidence 5899999999999999999999 58999999999999999999999999999999999864333 2466665441
Q ss_pred CCccccccEEEEecCcch---HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG---LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g---l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..+++|.||++.|... +.+.....+.+. ..+.+|..++|+.|+|||+||++.. + ...+.+..+++.+..
T Consensus 270 --~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~-~----~~~~~A~~~g~~aa~ 342 (479)
T 2hqm_A 270 --SIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGK-V----ELTPVAIAAGRKLSN 342 (479)
T ss_dssp --EEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGTTS-S----CCHHHHHHHHHHHHH
T ss_pred --EEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCCCCEEEEEecCCC-c----ccHHHHHHHHHHHHH
Confidence 3578999999999522 211111122222 3477788889999999999996432 2 245566777777776
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 343 ~i 344 (479)
T 2hqm_A 343 RL 344 (479)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 86
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.47 E-value=1.1e-12 Score=117.27 Aligned_cols=166 Identities=19% Similarity=0.213 Sum_probs=103.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.+... .|.. .-+..+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~--------~gg~~~~~--~~~~-----------------~~~~~~ 66 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQ--------LGGQLAAL--YPEK-----------------HIYDVA 66 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS--------SCHHHHHT--CTTS-----------------EECCST
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC--------CCCccccc--CCCc-----------------ccccCC
Confidence 58999999999999999999999999999997532 12211100 0000 000000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEee---CCeEEEEecCCCeEEEEcCeEEEccCC--
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFID---QHSVEATMKNGEKKTLTAENILIATGG-- 256 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~---~~~~~v~~~~G~~~~i~ad~vVlAtG~-- 256 (312)
. ...++...+..+ +...+...++++.... +..++ ...+.+++.+| .++.||+||+|||+
T Consensus 67 ~--~~~~~~~~~~~~-----------l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 67 G--FPEVPAIDLVES-----------LWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG--NVYRSRAVLIAAGLGA 131 (360)
T ss_dssp T--CSSEEHHHHHHH-----------HHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS--CEEEEEEEEECCTTCS
T ss_pred C--CCCCCHHHHHHH-----------HHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC--cEEEeeEEEEccCCCc
Confidence 0 001122222222 2233455677775443 43333 22577888777 67999999999998
Q ss_pred -CCCCCCCCC-CCcce---eccccccCC-CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 -RPNYPDIPG-AKEHC---ISSDDIFSL-EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 -~p~~p~~~g-~~~~~---~~~~~~~~~-~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|..|+++| .+.+. .+.. +... ...+++|+|||+|.+|++.+..|...+.+|++
T Consensus 132 ~~~~~~~i~g~~~~~~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~l 191 (360)
T 3ab1_A 132 FEPRKLPQLGNIDHLTGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTL 191 (360)
T ss_dssp CCBCCCGGGCCCTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEE
T ss_pred CCCCCCCCCCchhhCcCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 566777888 54331 1110 1111 13578999999999999999999988888876
No 87
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.47 E-value=6e-14 Score=128.84 Aligned_cols=161 Identities=18% Similarity=0.267 Sum_probs=104.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCCC--cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
.+|++|||+|++|+.+|..+.+.+. +++++|+..... | +.+ + .+ + ......
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~----~---~~~---~-l~-~---------------~~~~~~ 56 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP----H---HLP---P-LS-K---------------AYLAGK 56 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC----B---CSG---G-GG-T---------------TTTTTC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC----C---cCC---C-Cc-H---------------HHhCCC
Confidence 4799999999999999999999887 689998643210 0 000 0 00 0 000000
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
... ..... .....+...+++++.++ +..++....++++.+| .++.||+||+|||+.|+
T Consensus 57 ~~~-~~~~~------------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 57 ATA-ESLYL------------------RTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDG--RALDYDRLVLATGGRPR 115 (431)
T ss_dssp SCS-GGGBS------------------SCHHHHHHTTEEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEEC
T ss_pred CCh-HHhcc------------------cCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEcCCCCcc
Confidence 000 00000 01122345688887765 4555543345666677 57999999999999999
Q ss_pred CCCCCCCCcc----e---eccccccCCC---CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 260 YPDIPGAKEH----C---ISSDDIFSLE---KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 260 ~p~~~g~~~~----~---~~~~~~~~~~---~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+++|.+.. . .+.+++..+. ..+++|+|||+|.+|+|.|..|...+.+|++
T Consensus 116 ~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtl 177 (431)
T 1q1r_A 116 PLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTL 177 (431)
T ss_dssp CCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 9999987421 1 2334433321 3578999999999999999999988888886
No 88
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.47 E-value=3.8e-13 Score=122.60 Aligned_cols=142 Identities=18% Similarity=0.144 Sum_probs=106.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++|+ .+++++.+.+.+.|++.||++++++.+++++ + + .+.+.++
T Consensus 155 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~--~v~~~~g------ 223 (408)
T 2gqw_A 155 VIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D--G--VVLLDDG------ 223 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T--EEEETTS------
T ss_pred HHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C--EEEECCC------
Confidence 4799999999999999999999 58887 4899999999999999999999999999987 2 3 5666554
Q ss_pred CCccccccEEEEecCcc-hHHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccch-----hhHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIP-----KKLMHQAALLGEA 170 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~-----~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|.. ...+...+ ...+. .+.+|.+++|+.|+|||+||++....... ......+..+++.
T Consensus 224 --~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 300 (408)
T 2gqw_A 224 --TRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIA 300 (408)
T ss_dssp --CEEECSEEEECSCEEECCHHHHHHTCCBSS-SEECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHH
T ss_pred --CEEEcCEEEECcCCCccHHHHHhCCCCCCC-CEEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHH
Confidence 568999999999953 22232222 22232 37888889999999999999765432110 1134556666776
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 301 aa~~i 305 (408)
T 2gqw_A 301 VARHL 305 (408)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
No 89
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.47 E-value=3e-13 Score=124.93 Aligned_cols=161 Identities=19% Similarity=0.242 Sum_probs=101.3
Q ss_pred ccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.|++|||+|++|+.+|..+.+. +.+++++|+..... |..+. .... .....
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g----~~~~~-----------~~~~-------------~~~~~ 54 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG----YLSGG-----------LSAY-------------FNHTI 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS----SCCC----------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc----ccCcc-----------chhh-------------hcCCC
Confidence 4899999999999999999887 77899999765321 00000 0000 00000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFID--QHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
. +.. .+.......+.+.++++... .+..++ ...+.++.. ++..++.||+||+|||+.|
T Consensus 55 ~-------~~~-----------~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~-~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 55 N-------ELH-----------EARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRK-EEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp ------------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEET-TEEEEEECSEEEECCCCCB
T ss_pred C-------CHH-----------HhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEec-CceEEEEcCEEEECCCccc
Confidence 0 000 00000112334567877543 344444 345555422 2237899999999999999
Q ss_pred CCCCCCCCCcc-eeccccccC------CCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAKEH-CISSDDIFS------LEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~~~-~~~~~~~~~------~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..|+++|.+.. .+++.++.. ....+++++|||+|.+|+|.+..+...+.+|++
T Consensus 116 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 175 (452)
T 3oc4_A 116 FSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHV 175 (452)
T ss_dssp CCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 99999998642 344433322 224678999999999999999999988888886
No 90
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.46 E-value=4.6e-13 Score=122.35 Aligned_cols=147 Identities=16% Similarity=0.174 Sum_probs=109.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++++ .+++++.+.+.+.+++.||++++++.+++++...+....+.+.++
T Consensus 162 ~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG------ 235 (415)
T 3lxd_A 162 YIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDG------ 235 (415)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSS------
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCC------
Confidence 4899999999999999999999 57776 479999999999999999999999999999864333236777665
Q ss_pred CCccccccEEEEecCcch-HHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccch------hhHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIP------KKLMHQAALLGE 169 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~------~~~~~~a~~~~~ 169 (312)
..+++|.||+++|... ..++..+ ...+ +.+.+|..++|+.|+||++||++....... ....+.+..++.
T Consensus 236 --~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~ 312 (415)
T 3lxd_A 236 --SVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMAT 312 (415)
T ss_dssp --CEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHH
T ss_pred --CEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHH
Confidence 5789999999999522 2222211 2222 348888889999999999999765543111 112456666777
Q ss_pred HHHHHH
Q psy11185 170 AIKDAV 175 (312)
Q Consensus 170 ~~~~~~ 175 (312)
.+..+.
T Consensus 313 ~aa~~i 318 (415)
T 3lxd_A 313 AAAKDI 318 (415)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766654
No 91
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.46 E-value=1.7e-13 Score=127.93 Aligned_cols=147 Identities=22% Similarity=0.293 Sum_probs=111.5
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++.||++++++++.+++..++ .+.+.+.+...+.
T Consensus 208 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~--- 283 (491)
T 3urh_A 208 VIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD-GAKVTFEPVKGGE--- 283 (491)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTSCC---
T ss_pred HHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCC-EEEEEEEecCCCc---
Confidence 5899999999999999999999 5899999999999999999999999999999999987543 3566666421110
Q ss_pred CccccccEEEEecCcc----hHHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSG----GLAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~----gl~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..++++|.||++.|.. .+.+.......+. ..+.+|..++|+.|+|||+||++... ...+.+..+++.+..
T Consensus 284 ~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~ 358 (491)
T 3urh_A 284 ATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP-----MLAHKAEDEGVAVAE 358 (491)
T ss_dssp CEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCc-----cchhHHHHHHHHHHH
Confidence 1468899999999952 2212222233332 34778888999999999999965332 455667777777776
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 359 ~i 360 (491)
T 3urh_A 359 II 360 (491)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 92
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.46 E-value=1.5e-13 Score=129.18 Aligned_cols=149 Identities=28% Similarity=0.452 Sum_probs=108.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCC---CeeEEEEeecccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD---GKLKVQYKNVAEVRQ 96 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~---~~~~v~~~~~~~~~~ 96 (312)
.+|+|+|..|+++|.+||+++++++|+.+|+++.+.+.+.|+++||++++++.+.+++...+ +.+.+.+...+..+.
T Consensus 220 ~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~ 299 (519)
T 3qfa_A 220 YVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEI 299 (519)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCE
T ss_pred HHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEE
Confidence 48999999999999999999998899999999999999999999999999988888775332 334555443221100
Q ss_pred CCCccccccEEEEecCcc----hHHHHHHHHHCC--CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 97 DNTHKYDYDLLVLGGGSG----GLAAAKEAAAHG--RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 97 ~~~~~~~~d~vivg~G~~----gl~~a~~~~~~~--~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
..+++|.||++.|.. .+.+.....+.+ ...+.+|..++|+.|+|||+||++...+ ...+.+..+++.
T Consensus 300 ---~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~----~~~~~A~~~g~~ 372 (519)
T 3qfa_A 300 ---IEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKV----ELTPVAIQAGRL 372 (519)
T ss_dssp ---EEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSSC----CCHHHHHHHHHH
T ss_pred ---EEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCCCC----ccHHHHHHHHHH
Confidence 246799999999952 221221112232 2347788889999999999999663322 345566777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 373 aa~~i 377 (519)
T 3qfa_A 373 LAQRL 377 (519)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.46 E-value=6.9e-13 Score=106.89 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=99.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCC---------ccc-----hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPL---------RGF-----DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL 84 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l---------~~~-----~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~ 84 (312)
.+|+|+|..|+++|.+|+|+|+ +.++ +++ ++++.+++.+.+++.||+++++ ++++++.++++ +
T Consensus 11 ~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~ 88 (180)
T 2ywl_A 11 PSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-F 88 (180)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-E
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-E
Confidence 5899999999999999999998 4555 234 6889999999999999999999 99999865443 4
Q ss_pred EEEEeeccccccCCCccccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHH
Q psy11185 85 KVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQA 164 (312)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a 164 (312)
.+.+.++ ++++|.||++.|...........+.+...+.+|..++|+.|+||++||++.... ...+.+
T Consensus 89 ~v~~~~g---------~i~ad~vI~A~G~~~~~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~----~~~~~A 155 (180)
T 2ywl_A 89 EVETEEG---------VEKAERLLLCTHKDPTLPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP----GHAIIS 155 (180)
T ss_dssp EEECSSC---------EEEEEEEEECCTTCCHHHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS----CCHHHH
T ss_pred EEEECCC---------EEEECEEEECCCCCCCccccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch----hhHHHH
Confidence 4544332 578999999999754221111112223357788889999999999999765432 133344
Q ss_pred HHHHHHHHHH
Q psy11185 165 ALLGEAIKDA 174 (312)
Q Consensus 165 ~~~~~~~~~~ 174 (312)
..++..+..+
T Consensus 156 ~~~g~~aa~~ 165 (180)
T 2ywl_A 156 AGDGAYVAVH 165 (180)
T ss_dssp HHHHHHHHHH
T ss_pred HHhHHHHHHH
Confidence 4455544443
No 94
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.46 E-value=1.3e-13 Score=125.53 Aligned_cols=160 Identities=18% Similarity=0.248 Sum_probs=104.9
Q ss_pred ccEEEEecCcchHHHHHHHHHCCC--cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.+++|||+|++|+.+|..|.+.+. +++++|+........ .+ .+.. .+....
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~----------~~-l~~~----------------~l~~~~ 54 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQR----------PP-LSKA----------------YLKSGG 54 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCS----------GG-GGTG----------------GGGSCC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCC----------cc-CCHH----------------HHCCCC
Confidence 479999999999999999999887 799998754211100 00 0000 000000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
.. ...... ....+...++++....+..++.....+++.+| ..+.||+||+|||+.|+.|
T Consensus 55 ~~-~~~~~~------------------~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~ 113 (404)
T 3fg2_P 55 DP-NSLMFR------------------PEKFFQDQAIELISDRMVSIDREGRKLLLASG--TAIEYGHLVLATGARNRML 113 (404)
T ss_dssp CT-TSSBSS------------------CHHHHHHTTEEEECCCEEEEETTTTEEEESSS--CEEECSEEEECCCEEECCC
T ss_pred CH-HHccCC------------------CHHHHHhCCCEEEEEEEEEEECCCCEEEECCC--CEEECCEEEEeeCCCccCC
Confidence 00 000010 11223456888877556666655556777788 6899999999999999999
Q ss_pred CCCCCCcc-ee---ccccccCC---CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 262 DIPGAKEH-CI---SSDDIFSL---EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 262 ~~~g~~~~-~~---~~~~~~~~---~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
++||.+.. .+ +.++...+ ...+++++|||+|.+|+|++..+...+.+|++
T Consensus 114 ~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtv 170 (404)
T 3fg2_P 114 DVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDV 170 (404)
T ss_dssp CSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 99987532 22 22332222 23578999999999999999999888888876
No 95
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.46 E-value=1.2e-13 Score=128.62 Aligned_cols=150 Identities=23% Similarity=0.274 Sum_probs=110.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCC-eeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADG-KLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~-~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++|+.+++++.+.+.+.|++.||++++++.+++++...++ .+.+.+.+...+..
T Consensus 197 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~- 275 (478)
T 3dk9_A 197 YIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPV- 275 (478)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCE-
T ss_pred HHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcc-
Confidence 5899999999999999999999 68999999999999999999999999999999999875555 35566654211100
Q ss_pred CCccccccEEEEecCcch----HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG----LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g----l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
....+++|.||++.|... +.+.....+.+. ..+.+|..++|+.|+|||+||++.. + ...+.+..+++.+.
T Consensus 276 ~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~-~----~~~~~A~~~g~~aa 350 (478)
T 3dk9_A 276 MTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGK-A----LLTPVAIAAGRKLA 350 (478)
T ss_dssp EEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGGCS-S----CCHHHHHHHHHHHH
T ss_pred cceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecCCC-C----ccHhHHHHHHHHHH
Confidence 003578999999999522 212221122222 3477888899999999999996522 2 34556677777776
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 351 ~~i 353 (478)
T 3dk9_A 351 HRL 353 (478)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 96
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.46 E-value=1.4e-13 Score=128.18 Aligned_cols=162 Identities=20% Similarity=0.236 Sum_probs=104.2
Q ss_pred ccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.|++|||+|++|+.+|..+.+. +.+++++|+..... +..|. .+ . . . .+ ..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~-------~~~~~----~~----~-------~----~-~~-~~ 88 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS-------YAQCG----LP----Y-------V----I-SG-AI 88 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS-------BCGGG----HH----H-------H----H-TT-SS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC-------CCCCC----cc----h-------h----h-cC-Cc
Confidence 5999999999999999999875 77899999754211 11010 00 0 0 0 01 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHH-hcCCceEEece-eEEee--CCeEEEEe-cCCCeEEEEcCeEEEccCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVML-RDKKVDYLNAL-GKFID--QHSVEATM-KNGEKKTLTAENILIATGG 256 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gV~~~~~~-~~~~~--~~~~~v~~-~~G~~~~i~ad~vVlAtG~ 256 (312)
.++..+..+ ....+ +..+++++.+. +..++ ...+.+.. .+|+..++.||+||+|||+
T Consensus 89 -------~~~~~l~~~-----------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 89 -------ASTEKLIAR-----------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp -------SCGGGGBSS-----------CHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred -------CCHHHhhhc-----------CHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 011110000 00112 34588887654 44444 45666665 4574457999999999999
Q ss_pred CCCCCCCCCCCcc-ee---ccccccCCC-----CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGAKEH-CI---SSDDIFSLE-----KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~~~~-~~---~~~~~~~~~-----~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+.|+++|.+.. .+ ++++...+. ..+++|+|||+|++|+|.|..+...+.+|++
T Consensus 151 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 214 (480)
T 3cgb_A 151 RPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRM 214 (480)
T ss_dssp EECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 9999999988532 22 233333332 2688999999999999999999888888886
No 97
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.46 E-value=2.2e-13 Score=125.91 Aligned_cols=164 Identities=19% Similarity=0.272 Sum_probs=104.4
Q ss_pred ccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
+|++|||+|++|+.+|..+.+. +.+++++|+..... ..+| .... .. .+ ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~------------~~~~---~~~~-----------~~-~g-~~ 52 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS------------FLSC---GIAL-----------YL-GK-EI 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC------------BCGG---GHHH-----------HH-TT-CB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC------------cccc---cchh-----------hh-cC-Cc
Confidence 4899999999999999999887 88999999754211 0011 0000 00 00 00
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEee--CCeEEEEe-cCCCeEEEEcCeEEEccCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFID--QHSVEATM-KNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~--~~~~~v~~-~~G~~~~i~ad~vVlAtG~~ 257 (312)
. ..++..+ .......+...++++..+. +..++ ...+.+.. .+|+..++.||+||+|||+.
T Consensus 53 ~-----~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 53 K-----NNDPRGL-----------FYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp G-----GGCGGGG-----------BSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred c-----cCCHHHh-----------hhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCC
Confidence 0 0011110 0001123445688886554 44444 45566654 23334789999999999999
Q ss_pred CCCCCCCCCCcc-eeccc------cccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 258 PNYPDIPGAKEH-CISSD------DIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 p~~p~~~g~~~~-~~~~~------~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+.|+++|.+.. .+++. .+......+++++|||+|.+|+|.|..+...+.+|++
T Consensus 117 p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 177 (452)
T 2cdu_A 117 PTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNL 177 (452)
T ss_dssp ECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEE
Confidence 999999988532 33322 2222334688999999999999999999988888886
No 98
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.45 E-value=1.2e-13 Score=128.23 Aligned_cols=169 Identities=24% Similarity=0.313 Sum_probs=95.8
Q ss_pred ccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.|++|||+|++|+.+|..|.+. +.+++++|+..... |.. | ..|. . ++..+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~----~~~---~----gl~~-------~----------~~g~~ 55 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS----YGG---C----GIPY-------Y----------VSGEV 55 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc----ccc---c----ccch-------h----------hcCCC
Confidence 5899999999999999999887 77899999754311 000 0 0000 0 00000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEee--CCeEEEEe-cCCCeEEEEcCeEEEccCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFID--QHSVEATM-KNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~--~~~~~v~~-~~G~~~~i~ad~vVlAtG~~ 257 (312)
.+...+..+ +..+...........++++... .+..++ ...+.+.. .+|+...+.||+||+|||+.
T Consensus 56 -------~~~~~~~~~----~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 56 -------SNIESLQAT----PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ------------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -------CchHHhccc----cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCC
Confidence 000000000 0000000111122457777543 344444 34555554 34655689999999999999
Q ss_pred CCCCCCCCCCcc-ee---ccccccCCC-----CCCCeEEEEcCchhhHHHHHHhhcC-ceeeee
Q psy11185 258 PNYPDIPGAKEH-CI---SSDDIFSLE-----KPPGKTLVVGAGYIGKLETWDSNSG-CGNVTI 311 (312)
Q Consensus 258 p~~p~~~g~~~~-~~---~~~~~~~~~-----~~~~~v~VvG~G~sa~~~a~~l~~~-~~~V~~ 311 (312)
|..|+++|.+.. .+ +..+...+. ..+++++|||+|.+|+|.+..+... +.+|++
T Consensus 125 p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtl 188 (472)
T 3iwa_A 125 ANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTV 188 (472)
T ss_dssp ECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEE
T ss_pred cCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE
Confidence 999999998532 22 222222222 4578999999999999999998887 778876
No 99
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.45 E-value=7.3e-14 Score=130.67 Aligned_cols=142 Identities=21% Similarity=0.200 Sum_probs=108.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++|+.+++++.+.+.+.|++.||++++++.+++++.++++ +.+.+.++
T Consensus 192 ~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v~v~~~~g------- 263 (499)
T 1xdi_A 192 VTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAG-VLVTMTDG------- 263 (499)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-EEEEETTS-------
T ss_pred HHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-EEEEECCC-------
Confidence 5899999999999999999999 58999999999999999999999999999999999865433 45554333
Q ss_pred CccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
.++++|.||+++|... .. +.....+.+. ..+.+|+.++|+.|+|||+||++... ...+.+..+++.+..
T Consensus 264 -~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~ 337 (499)
T 1xdi_A 264 -RTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLL-----PLASVAAMQGRIAMY 337 (499)
T ss_dssp -CEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEECSGGGTSC-----SCHHHHHHHHHHHHH
T ss_pred -cEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHH
Confidence 5689999999999522 11 1111122222 33678888999999999999965432 345567777887777
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 338 ~i 339 (499)
T 1xdi_A 338 HA 339 (499)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 100
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.45 E-value=2.8e-13 Score=128.55 Aligned_cols=148 Identities=20% Similarity=0.239 Sum_probs=112.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEc------------------C
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL------------------A 80 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~------------------~ 80 (312)
.+|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++.||++++++.+.+++.. .
T Consensus 161 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 240 (565)
T 3ntd_A 161 FIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI 240 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT
T ss_pred HHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccC
Confidence 4799999999999999999999 58999999999999999999999999999999999863 2
Q ss_pred CCeeEEEEeeccccccCCCccccccEEEEecCcch-HHHHHHH-HHCCC-cEEEEeccCCCCCCcccccCCccccccc--
Q psy11185 81 DGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG-LAAAKEA-AAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGC-- 155 (312)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g-l~~a~~~-~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~-- 155 (312)
++.+.+.+.++ .++++|.||++.|... ..+...+ ...+. ..+.+|..++|+.|+|||+||++.....
T Consensus 241 ~~~~~v~~~~g--------~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~ 312 (565)
T 3ntd_A 241 KGHLSLTLSNG--------ELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVT 312 (565)
T ss_dssp TCEEEEEETTS--------CEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTT
T ss_pred CCcEEEEEcCC--------CEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccC
Confidence 34455666444 5789999999999522 2222221 22222 3477888899999999999997643221
Q ss_pred ---chhhHHHHHHHHHHHHHHHH
Q psy11185 156 ---IPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 156 ---~~~~~~~~a~~~~~~~~~~~ 175 (312)
......+.+..+++.+..+.
T Consensus 313 g~~~~~~~~~~A~~~g~~aa~~i 335 (565)
T 3ntd_A 313 GQACLVPLAGPANRQGRMAADNM 335 (565)
T ss_dssp CCEECCCCHHHHHHHHHHHHHHH
T ss_pred CceeecccHHHHHHHHHHHHHHh
Confidence 11235677888888887776
No 101
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.45 E-value=1.1e-13 Score=127.62 Aligned_cols=161 Identities=19% Similarity=0.283 Sum_probs=102.7
Q ss_pred cEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
|+||||+|++|+.+|..+.+. +.+++++|+..... ..+| .... .. .+ ...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~------------~~~~---~~~~-----------~~-~~-~~~ 53 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS------------FLSA---GMQL-----------YL-EG-KVK 53 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS------------BCGG---GHHH-----------HH-TT-SSC
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC------------cccc---cchh-----------hh-cC-ccC
Confidence 799999999999999999887 77899999754211 0111 0000 00 01 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEe--eCCeEEEEe-cCCCeEEEEcCeEEEccCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFI--DQHSVEATM-KNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~--~~~~~~v~~-~~G~~~~i~ad~vVlAtG~~p 258 (312)
++..+ .......+.+.++++..+. +..+ +...+.+.. .+|+..++.||+||+|||+.|
T Consensus 54 -------~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 54 -------DVNSV-----------RYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp -------CGGGS-----------BSCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -------CHHHh-----------hcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 00000 0001122345688886554 4334 345566654 456445699999999999999
Q ss_pred CCCCCCCCCc-ceeccccc---cCC-----CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAKE-HCISSDDI---FSL-----EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~~-~~~~~~~~---~~~-----~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..|++||.+. ..+++.++ ..+ ...+++++|||+|.+|+++|..+...+.+|++
T Consensus 116 ~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtl 177 (447)
T 1nhp_A 116 FELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTV 177 (447)
T ss_dssp CCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 9999999853 23333322 111 12678999999999999999999888888886
No 102
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.45 E-value=3.6e-13 Score=125.06 Aligned_cols=147 Identities=17% Similarity=0.184 Sum_probs=111.5
Q ss_pred hhhhhhhHhhhcc-CCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeecccccc
Q psy11185 20 DSGLECAGFLNGL-GFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQ 96 (312)
Q Consensus 20 ~ig~E~A~~l~~~-g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~ 96 (312)
.+|+|+|..|+++ |.+||++++ +++++ .+++++.+.+.+.+++.||++++++.+.+++.. ++.+.+.+.++
T Consensus 169 ~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~v~~~~g----- 242 (472)
T 3iwa_A 169 FIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVARVITDK----- 242 (472)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEESS-----
T ss_pred HHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEEEEEeCC-----
Confidence 4899999999999 999999999 58888 899999999999999999999999999999863 34456777655
Q ss_pred CCCccccccEEEEecCcc-hHHHHHHH-HHCCC-cEEEEeccCCCCCCcccccCCcccccccc-----hhhHHHHHHHHH
Q psy11185 97 DNTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCI-----PKKLMHQAALLG 168 (312)
Q Consensus 97 ~~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~-----~~~~~~~a~~~~ 168 (312)
.++++|.||++.|.. ...++..+ .+.+. ..+.+|..++|+.|+||++||++...... .....+.+..++
T Consensus 243 ---~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g 319 (472)
T 3iwa_A 243 ---RTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQG 319 (472)
T ss_dssp ---CEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHH
T ss_pred ---CEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHH
Confidence 568999999999963 22222222 22222 35788888999999999999976432211 123455677777
Q ss_pred HHHHHHH
Q psy11185 169 EAIKDAV 175 (312)
Q Consensus 169 ~~~~~~~ 175 (312)
..+..+.
T Consensus 320 ~~aa~~i 326 (472)
T 3iwa_A 320 RVIGTNL 326 (472)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777765
No 103
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.45 E-value=1.3e-13 Score=127.42 Aligned_cols=145 Identities=21% Similarity=0.304 Sum_probs=108.0
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|++.||++++++++++++.+++ .+.+.+.+.+.
T Consensus 180 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~g~----- 253 (455)
T 1ebd_A 180 YIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEERED-GVTVTYEANGE----- 253 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEETTE-----
T ss_pred HHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eEEEEEEeCCc-----
Confidence 5899999999999999999999 5899999999999999999999999999999999986433 35555542111
Q ss_pred CccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..++++|.||++.|... .. +.....+.+. ..+.+|..++|+.|+||++||++... ...+.+..++..+..
T Consensus 254 ~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~ 328 (455)
T 1ebd_A 254 TKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGP-----ALAHKASYEGKVAAE 328 (455)
T ss_dssp EEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHH
T ss_pred eeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHH
Confidence 14689999999999522 11 1111112222 34778888999999999999965432 244566777777776
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 329 ~i 330 (455)
T 1ebd_A 329 AI 330 (455)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 104
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.45 E-value=2.7e-13 Score=123.68 Aligned_cols=146 Identities=14% Similarity=0.083 Sum_probs=109.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++++ .+++++.+.+.+.+++.||++++++.+++++.++ ....+.+.++
T Consensus 153 ~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~~dg------ 225 (410)
T 3ef6_A 153 LIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEG-QLEQVMASDG------ 225 (410)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSS-SCCEEEETTS------
T ss_pred HHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccC-cEEEEEECCC------
Confidence 5899999999999999999999 57775 4899999999999999999999999999997533 3236777665
Q ss_pred CCccccccEEEEecCcc-hHHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccc----hhhHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCI----PKKLMHQAALLGEAI 171 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~----~~~~~~~a~~~~~~~ 171 (312)
+.+++|.||++.|.. ...++..+ .+.+ +.+.+|..++|+.|+||++||++...... .....+.+..++..+
T Consensus 226 --~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~a 302 (410)
T 3ef6_A 226 --RSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAV 302 (410)
T ss_dssp --CEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHH
T ss_pred --CEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHH
Confidence 578999999999952 22222221 2222 34888988999999999999976543211 112245666777777
Q ss_pred HHHH
Q psy11185 172 KDAV 175 (312)
Q Consensus 172 ~~~~ 175 (312)
..+.
T Consensus 303 a~~i 306 (410)
T 3ef6_A 303 AAAI 306 (410)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 105
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.44 E-value=1.4e-13 Score=127.16 Aligned_cols=147 Identities=15% Similarity=0.135 Sum_probs=108.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++|+ .+++++.+.+.+.|++.||++++++.+++++.. ++.+.....++
T Consensus 159 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~~g------ 231 (452)
T 2cdu_A 159 YIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTLDG------ 231 (452)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEETTS------
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEeCC------
Confidence 5899999999999999999999 58888 799999999999999999999999999999753 33332222233
Q ss_pred CCccccccEEEEecCcch-HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccc-----hhhHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCI-----PKKLMHQAALLGEA 170 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~-----~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... ..+...+...+. ..+.+|.+++|+.|+|||+||++...... .....+.+..++..
T Consensus 232 --~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 309 (452)
T 2cdu_A 232 --KEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRL 309 (452)
T ss_dssp --CEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHH
T ss_pred --CEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHH
Confidence 4689999999999521 111111122222 34778888999999999999976543211 12356777888888
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 310 aa~~i 314 (452)
T 2cdu_A 310 VGLNL 314 (452)
T ss_dssp HHHTS
T ss_pred HHHHh
Confidence 87765
No 106
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.44 E-value=1.4e-13 Score=127.57 Aligned_cols=142 Identities=22% Similarity=0.240 Sum_probs=109.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEE-EeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQ-YKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~-~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++|+.+++++.+.+.+.|++.||++++++.+.+++..+++.+.+. +.++
T Consensus 180 ~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g------ 253 (463)
T 4dna_A 180 YIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG------ 253 (463)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC------
T ss_pred HHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC------
Confidence 5799999999999999999999 5889999999999999999999999999999999987555534565 5444
Q ss_pred CCccccccEEEEecCcchH-H---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGGL-A---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~gl-~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
+ +++|.||++.|.... . +.....+.+. ..+.+|..++|+.|+||++||++.. ....+.+..+++.+.
T Consensus 254 --~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~-----~~~~~~A~~~g~~aa 325 (463)
T 4dna_A 254 --E-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDR-----VQLTPVAIHEAMCFI 325 (463)
T ss_dssp --E-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSS-----CCCHHHHHHHHHHHH
T ss_pred --e-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCC-----CCChHHHHHHHHHHH
Confidence 4 889999999996221 1 1111122222 3477888899999999999996542 234566777777777
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 326 ~~i 328 (463)
T 4dna_A 326 ETE 328 (463)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 107
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.44 E-value=5.4e-13 Score=122.49 Aligned_cols=147 Identities=15% Similarity=0.080 Sum_probs=107.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCcc-chHHHHHHHHHHHhccceEEEeeceeeEEEEc-CCCee-EEEEeeccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRG-FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL-ADGKL-KVQYKNVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~-~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~-~~~~~-~v~~~~~~~~~ 95 (312)
.+|+|+|..|+++|.+||++++ +++|+. +++++.+.+.+.+++.||++++++.+.+++.. .++.+ .+.+.++
T Consensus 159 ~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G---- 234 (431)
T 1q1r_A 159 YIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDG---- 234 (431)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTS----
T ss_pred HHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCC----
Confidence 4799999999999999999999 577775 89999999999999999999999999999751 22323 5666554
Q ss_pred cCCCccccccEEEEecCcc-hHHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccc-----hhhHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCI-----PKKLMHQAALLG 168 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~-----~~~~~~~a~~~~ 168 (312)
..+++|.||++.|.. ...++..+ ...+ +.+.+|..++|+.|+||++||++...... .......+..++
T Consensus 235 ----~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg 309 (431)
T 1q1r_A 235 ----TRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQA 309 (431)
T ss_dssp ----CEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHH
T ss_pred ----CEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHH
Confidence 568999999999952 22322221 1222 23788888999999999999976543211 011345566677
Q ss_pred HHHHHHH
Q psy11185 169 EAIKDAV 175 (312)
Q Consensus 169 ~~~~~~~ 175 (312)
+.+..+.
T Consensus 310 ~~aa~~i 316 (431)
T 1q1r_A 310 RKIAAIL 316 (431)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7766655
No 108
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.43 E-value=9.7e-14 Score=128.86 Aligned_cols=147 Identities=18% Similarity=0.224 Sum_probs=108.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++|+.+++++.+.+.+.|++.||++++++.+.+++.++++ +.+.+.+...+ .
T Consensus 187 ~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~~g---~ 262 (470)
T 1dxl_A 187 YIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-VKLTVEPSAGG---E 262 (470)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-EEEEEEESSSC---C
T ss_pred HHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-EEEEEEecCCC---c
Confidence 5899999999999999999999 58999999999999999999999999999999999864333 55666521000 0
Q ss_pred CccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
...+++|.||++.|... .. +.....+.+. ..+.+|.+++|+.|+|||+||++... ...+.+..+++.+..
T Consensus 263 ~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~ 337 (470)
T 1dxl_A 263 QTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGP-----MLAHKAEEDGVACVE 337 (470)
T ss_dssp CEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSSC-----CCHHHHHHHHHHHHH
T ss_pred ceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCCC-----ccHHHHHHHHHHHHH
Confidence 14689999999999522 11 1111122222 34778888999999999999965432 345567777777777
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 338 ~i 339 (470)
T 1dxl_A 338 YL 339 (470)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 109
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.43 E-value=4.9e-14 Score=127.46 Aligned_cols=159 Identities=16% Similarity=0.188 Sum_probs=100.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCC--cEEEEeccCCCCCCcccccCCccccc-ccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVIPSPQGTTWGLGGTCVNV-GCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~~~~~~~v~a~Gd~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
.+|++|||+|++|+.+|..+.+.+. +++++|... | |... +.++. .+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~----------g--~~~~~~~l~~-----------------~~~- 53 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD----------G--RSYSKPMLST-----------------GFS- 53 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC----------C--CEECGGGGGG-----------------TTT-
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC----------C--CccCcccccH-----------------HHh-
Confidence 4799999999999999999998874 578888642 1 1110 00000 000
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
.......+. .......+...+++++.+. +..++....+++..+ .++.||+||+|||+.|
T Consensus 54 -------~~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 54 -------KNKDADGLA----------MAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE---EEVRYRDLVLAWGAEP 113 (384)
T ss_dssp -------TTCCHHHHE----------EECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT---EEEECSEEEECCCEEE
T ss_pred -------CCCCHHHhh----------ccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC---cEEECCEEEEeCCCCc
Confidence 000111110 0011122355688887543 444443223344443 3699999999999999
Q ss_pred CCCCCCCCC-cceeccccccCC------CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAK-EHCISSDDIFSL------EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~-~~~~~~~~~~~~------~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..|+++|.+ ...+++.++... -..+++++|||+|.+|+|.|..+...+.+|++
T Consensus 114 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 173 (384)
T 2v3a_A 114 IRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDV 173 (384)
T ss_dssp CCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 999999875 334444444322 12478999999999999999999988888886
No 110
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.43 E-value=2.3e-13 Score=126.99 Aligned_cols=145 Identities=17% Similarity=0.195 Sum_probs=108.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeecccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQ 96 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~ 96 (312)
.+|+|+|..|+++|.+|||+++ +++|+ .+++++.+.+.+.|++.||++++++.+++++. ++.+ .+.+ ++
T Consensus 204 ~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g----- 275 (490)
T 2bc0_A 204 YIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DK----- 275 (490)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SS-----
T ss_pred HHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CC-----
Confidence 4899999999999999999999 58888 79999999999999999999999999999975 2323 3444 33
Q ss_pred CCCccccccEEEEecCcch-HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCccccccc-----chhhHHHHHHHHHH
Q psy11185 97 DNTHKYDYDLLVLGGGSGG-LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGC-----IPKKLMHQAALLGE 169 (312)
Q Consensus 97 ~~~~~~~~d~vivg~G~~g-l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~-----~~~~~~~~a~~~~~ 169 (312)
.++++|.||++.|... ..+...+...+. ..+.+|..++|+.|+|||+||++..... ......+.+..+++
T Consensus 276 ---~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~ 352 (490)
T 2bc0_A 276 ---NEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGI 352 (490)
T ss_dssp ---CEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHH
T ss_pred ---cEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHH
Confidence 4689999999999521 111111122222 3477888899999999999997654221 11235667788888
Q ss_pred HHHHHH
Q psy11185 170 AIKDAV 175 (312)
Q Consensus 170 ~~~~~~ 175 (312)
.+..+.
T Consensus 353 ~aa~~i 358 (490)
T 2bc0_A 353 VAAHNA 358 (490)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887765
No 111
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.43 E-value=9.3e-13 Score=119.88 Aligned_cols=147 Identities=14% Similarity=0.138 Sum_probs=108.5
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|.++|.+||++++ +++++ .+++++.+.+.+.+++.||++++++.+++++...+....+.+.++
T Consensus 152 ~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG------ 225 (404)
T 3fg2_P 152 FIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDG------ 225 (404)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS------
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCC------
Confidence 4799999999999999999999 57776 489999999999999999999999999999864333235667665
Q ss_pred CCccccccEEEEecCcc-hHHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccc-----hhhHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCI-----PKKLMHQAALLGEA 170 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~-----~~~~~~~a~~~~~~ 170 (312)
+++++|.||+++|.. ...++..+ ...+ +.+.+|..++|+.|+||++||++...... .....+.+..++..
T Consensus 226 --~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~Gi~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~ 302 (404)
T 3fg2_P 226 --NTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AGIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARC 302 (404)
T ss_dssp --CEEECSEEEECCCEEECCHHHHHTTCCBS-SSEEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHH
T ss_pred --CEEEcCEEEECcCCccCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHH
Confidence 578999999999952 22222221 2222 23888888999999999999976543211 11124566677777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 303 aa~~i 307 (404)
T 3fg2_P 303 VAARL 307 (404)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66654
No 112
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.42 E-value=2.6e-13 Score=128.82 Aligned_cols=162 Identities=22% Similarity=0.270 Sum_probs=101.1
Q ss_pred cEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
+++|||+|++|+.+|..|.+. +.+++++|+..... |. .+ .... .. .+ ...
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~----~~--------~~---~l~~-----------~~-~~-~~~ 54 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS----FA--------NC---GLPY-----------HI-SG-EIA 54 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS----BC--------GG---GHHH-----------HH-TS-SSC
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc----cc--------cc---CchH-----------Hh-cC-CcC
Confidence 799999999999999999887 66899999754321 00 00 0000 00 11 000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEee--CCeEEEEe-cCCCeEEEEcCeEEEccCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFID--QHSVEATM-KNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~--~~~~~v~~-~~G~~~~i~ad~vVlAtG~~p 258 (312)
........+ ......+.++++... .+..++ ...+.+.. .+|+..++.||+||+|||+.|
T Consensus 55 ~~~~~~~~~-----------------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 55 QRSALVLQT-----------------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp CGGGGBCCC-----------------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ChHHhhccC-----------------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCC
Confidence 000000100 011122347777543 344444 34566554 346556899999999999999
Q ss_pred CCCCCCCCCcc-eecccccc---CC-----CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAKEH-CISSDDIF---SL-----EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~~~-~~~~~~~~---~~-----~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.|++||.+.. .++...+. .+ ...+++|+|||+|.+|+|.|..+...+.+|++
T Consensus 118 ~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 179 (565)
T 3ntd_A 118 IVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTL 179 (565)
T ss_dssp CCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEE
Confidence 99999998543 33333222 11 24678999999999999999999888888886
No 113
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.42 E-value=2.5e-13 Score=126.26 Aligned_cols=145 Identities=19% Similarity=0.244 Sum_probs=109.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++|+.+++++.+.+.+.|++.||++++++.+++++..++ .+.+.+.+++..
T Consensus 190 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~-~~~v~~~~~~g~---- 264 (476)
T 3lad_A 190 VIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNK-QVTVKFVDAEGE---- 264 (476)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSS-CEEEEEESSSEE----
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC-EEEEEEEeCCCc----
Confidence 5899999999999999999999 5899999999999999999999999999999999986543 356777654210
Q ss_pred CccccccEEEEecCcchHH----HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGGLA----AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~gl~----~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..+++|.||++.|..... +.......+. ..+.+|..++|+.|+||++||++.. + ...+.+..+++.+..
T Consensus 265 -~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~-~----~~~~~A~~~g~~aa~ 338 (476)
T 3lad_A 265 -KSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRG-A----MLAHKASEEGVVVAE 338 (476)
T ss_dssp -EEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGSSS-C----CCHHHHHHHHHHHHH
T ss_pred -EEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccCCC-c----ccHHHHHHHHHHHHH
Confidence 467899999999952211 1111112222 3477888899999999999996532 2 245566777777666
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 339 ~i 340 (476)
T 3lad_A 339 RI 340 (476)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 114
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.41 E-value=5.5e-13 Score=124.26 Aligned_cols=142 Identities=20% Similarity=0.308 Sum_probs=109.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|+++++ +++++.+++++.+.+.+.+++.||++++++.+++++..+++ +.+.+.++
T Consensus 201 ~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g------- 272 (484)
T 3o0h_A 201 YIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENC-YNVVLTNG------- 272 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSS-EEEEETTS-------
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCE-EEEEECCC-------
Confidence 4789999999999999999999 58899999999999999999999999999999999875443 56766654
Q ss_pred CccccccEEEEecCcc----hHHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSG----GLAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~----gl~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..+++|.||++.|.. .+.+.....+.+. ..+.+|..++|+.|+||++||++.. + ...+.+..+++.+..
T Consensus 273 -~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~-~----~~~~~A~~~g~~aa~ 346 (484)
T 3o0h_A 273 -QTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGH-I----QLTPVAIHDAMCFVK 346 (484)
T ss_dssp -CEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTS-C----CCHHHHHHHHHHHHH
T ss_pred -cEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCC-C----cCHHHHHHHHHHHHH
Confidence 468999999999952 2112222222332 3477888899999999999996542 2 345566777777666
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 347 ~i 348 (484)
T 3o0h_A 347 NA 348 (484)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 115
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.41 E-value=3e-13 Score=124.40 Aligned_cols=161 Identities=16% Similarity=0.184 Sum_probs=100.7
Q ss_pred cEEEEecCcchHHHHHHHHHCCC--cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+||||+|++|+.+|..+.+.+. +++++|+..... +. ..++|. . .+....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~----~~~l~~-----------~------~~~~~~ 53 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS-------FA----NCALPY-----------V------IGEVVE 53 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS-------BC----GGGHHH-----------H------HTTSSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC-------CC----cchhHH-----------H------HcCCcc
Confidence 48999999999999999988774 588998743211 11 111110 0 010000
Q ss_pred Ccc-ccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeC--CeEEEEe-cCCCeEEEEcCeEEEccCCC
Q psy11185 183 NVK-SVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQ--HSVEATM-KNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~--~~~~v~~-~~G~~~~i~ad~vVlAtG~~ 257 (312)
... ....... ....+.++++..++ +..++. ..+.+.. .+++..++.||+||||||+.
T Consensus 54 ~~~~~~~~~~~------------------~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 54 DRRYALAYTPE------------------KFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp CGGGTBCCCHH------------------HHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred chhhhhhcCHH------------------HHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 000 0011111 11244578876554 444443 3444443 34445789999999999999
Q ss_pred CCCCCCCCCCcce-eccccccCC-----CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 258 PNYPDIPGAKEHC-ISSDDIFSL-----EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 p~~p~~~g~~~~~-~~~~~~~~~-----~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|+.|+++|...+. .+..+...+ ...+++++|||||.+|+|.|..+...+.+||+
T Consensus 116 p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 175 (437)
T 4eqs_A 116 ANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTL 175 (437)
T ss_dssp ECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred cccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCccee
Confidence 9999999875442 233333322 23478999999999999999999998889986
No 116
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.40 E-value=3.9e-13 Score=124.20 Aligned_cols=146 Identities=16% Similarity=0.209 Sum_probs=107.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCcc-chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRG-FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~-~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++++. +|+++.+.+.+.|++.||++++++.+++++..++. +.+.+.+
T Consensus 157 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-v~v~~~~------- 228 (452)
T 3oc4_A 157 PIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANG-IVLETSE------- 228 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSC-EEEEESS-------
T ss_pred HHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCe-EEEEECC-------
Confidence 5899999999999999999999 588876 89999999999999999999999999999854333 4454432
Q ss_pred CCccccccEEEEecCcch-HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccc-----hhhHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCI-----PKKLMHQAALLGEA 170 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~-----~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... ..+.......+ ...+.+|..++|+.|+|||+||++...... .....+.+..+++.
T Consensus 229 --g~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~ 306 (452)
T 3oc4_A 229 --QEISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLV 306 (452)
T ss_dssp --CEEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHH
T ss_pred --CEEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHH
Confidence 2578999999999521 11111112222 235778888999999999999976543110 11355667777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 307 aa~~i 311 (452)
T 3oc4_A 307 VANNL 311 (452)
T ss_dssp HTTSS
T ss_pred HHHHh
Confidence 66543
No 117
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.39 E-value=5.2e-13 Score=124.61 Aligned_cols=143 Identities=18% Similarity=0.213 Sum_probs=106.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe--ecccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK--NVAEVRQ 96 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~~~ 96 (312)
.+|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++. |++++++.+++++..+++ +.+.+. +++.
T Consensus 184 ~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v~v~~~~~~G~~--- 258 (492)
T 3ic9_A 184 VIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-VEVIYFDKSGQK--- 258 (492)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-EEEEEECTTCCE---
T ss_pred HHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-EEEEEEeCCCce---
Confidence 5899999999999999999999 5889999999999999999988 999999999999875443 566665 2311
Q ss_pred CCCccccccEEEEecCcch----HHHHHHHHHCCC-cEEEEe-ccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 97 DNTHKYDYDLLVLGGGSGG----LAAAKEAAAHGR-KVIVLD-YVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 97 ~~~~~~~~d~vivg~G~~g----l~~a~~~~~~~~-~~~~ve-~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
..+++|.||++.|... +.+.......+. ..+.+| ..++|+.|+||++||++... ...+.+..+++.
T Consensus 259 ---~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~ 330 (492)
T 3ic9_A 259 ---TTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTL-----TLLHEAADDGKV 330 (492)
T ss_dssp ---EEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSS-----CSHHHHHHHHHH
T ss_pred ---EEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCC-----ccHHHHHHHHHH
Confidence 4678999999999622 111111122222 246677 78899999999999965432 344566666666
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 331 aa~~i 335 (492)
T 3ic9_A 331 AGTNA 335 (492)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 118
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.38 E-value=5e-13 Score=123.57 Aligned_cols=142 Identities=15% Similarity=0.142 Sum_probs=105.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++++.+++++.+.+.+.+++.||++++++++++++...+ .+.+.+.++
T Consensus 177 ~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g------- 248 (455)
T 2yqu_A 177 VIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GARVELEGG------- 248 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EEEEEETTS-------
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EEEEEECCC-------
Confidence 4889999999999999999999 5889999999999999999999999999999999986433 345555443
Q ss_pred CccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..+++|.||++.|... .. +.......+. ..+.+|..++++.|+||++||++... ...+.+..++..+..
T Consensus 249 -~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~ 322 (455)
T 2yqu_A 249 -EVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGP-----MLAHKASEEGIAAVE 322 (455)
T ss_dssp -CEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHH
T ss_pred -eEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCc-----cCHHHHHHhHHHHHH
Confidence 5689999999999522 11 1111111222 33667888899999999999965432 234456666666665
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 323 ~i 324 (455)
T 2yqu_A 323 HM 324 (455)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 119
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.38 E-value=7.2e-13 Score=126.38 Aligned_cols=145 Identities=19% Similarity=0.173 Sum_probs=110.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++.||++++++.+++++...+ .+.+.++
T Consensus 197 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g------- 266 (588)
T 3ics_A 197 FIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSG------- 266 (588)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTS-------
T ss_pred HHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCC-------
Confidence 5899999999999999999999 5899999999999999999999999999999999975432 4666554
Q ss_pred CccccccEEEEecCcch-HHHHHHH-HHCCC-cEEEEeccCCCCCCcccccCCccccccc-----chhhHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEA-AAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGC-----IPKKLMHQAALLGEA 170 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~-~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~-----~~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... ..+...+ .+.+. ..+.+|..++|+.|+|||+||++..... ......+.+..+++.
T Consensus 267 -~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 345 (588)
T 3ics_A 267 -SVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRM 345 (588)
T ss_dssp -CEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHH
T ss_pred -CEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHH
Confidence 5689999999999522 2222111 11221 3477888899999999999997643221 112456677888888
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 346 aa~~i 350 (588)
T 3ics_A 346 LADII 350 (588)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87765
No 120
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.37 E-value=7.2e-13 Score=122.91 Aligned_cols=140 Identities=19% Similarity=0.234 Sum_probs=104.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++|+ +++++.+.+.+.+++.||++++++.+++++.++ +.+.+.+. +
T Consensus 186 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~v~~~-~------- 255 (467)
T 1zk7_A 186 VVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-GEFVLTTT-H------- 255 (467)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEET-TEEEEEET-T-------
T ss_pred HHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEC-C-------
Confidence 4799999999999999999999 58899 999999999999999999999999999998643 32344443 2
Q ss_pred CccccccEEEEecCcch----HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG----LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g----l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
.++++|.||+++|... +.+.....+.+. ..+.+|..++++.|+||++||++... ...+.+..++..+..
T Consensus 256 -~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~ 329 (467)
T 1zk7_A 256 -GELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQP-----QFVYVAAAAGTRAAI 329 (467)
T ss_dssp -EEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTBSSC-----CCHHHHHHHHHHHHH
T ss_pred -cEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHH
Confidence 4679999999999522 111111122222 23677888999999999999965432 234556677777776
Q ss_pred HH
Q psy11185 174 AV 175 (312)
Q Consensus 174 ~~ 175 (312)
+.
T Consensus 330 ~i 331 (467)
T 1zk7_A 330 NM 331 (467)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 121
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.36 E-value=1.3e-12 Score=124.62 Aligned_cols=164 Identities=19% Similarity=0.259 Sum_probs=104.0
Q ss_pred cccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
..+++|||+|++|+.+|..|.+. +.+++++|+...... .. + ... ....+ .
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~----~~--------~---~lp------------~~~~g-~ 87 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF----AN--------C---GLP------------YYIGG-V 87 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB----CG--------G---GHH------------HHHTT-S
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc----cC--------C---CCc------------hhhcC-c
Confidence 46899999999999999999887 678999997543210 00 0 000 00011 0
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEec-eeEEee--CCeEEEEe-cCCCeEEEEcCeEEEccCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNA-LGKFID--QHSVEATM-KNGEKKTLTAENILIATGG 256 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~-~~~~~~--~~~~~v~~-~~G~~~~i~ad~vVlAtG~ 256 (312)
....... +...........++++... .+..++ ...+.+.. .+|+...+.||+||+|||+
T Consensus 88 ~~~~~~~-----------------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 88 ITERQKL-----------------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp SCCGGGG-----------------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCChHHh-----------------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 0000000 0000112234557777543 344443 45566654 4565568999999999999
Q ss_pred CCCCCCCCCC-Cc-ceeccccccCC--------CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 257 RPNYPDIPGA-KE-HCISSDDIFSL--------EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 257 ~p~~p~~~g~-~~-~~~~~~~~~~~--------~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|..|+++|. +. ..++...+... ...+++++|||+|.+|+|.+..+...+.+|++
T Consensus 151 ~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 215 (588)
T 3ics_A 151 KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTL 215 (588)
T ss_dssp EECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 9999999998 32 23333332222 24688999999999999999999988888886
No 122
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.36 E-value=7.9e-13 Score=122.33 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=104.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+|||+++ +++++.+++++.+.+.+.|++.||++++++.+++++. ++ +.+...+++
T Consensus 181 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~-v~v~~~~G~------ 251 (458)
T 1lvl_A 181 YIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN--GC-LLANDGKGG------ 251 (458)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET--TE-EEEECSSSC------
T ss_pred HHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe--CC-EEEEECCCc------
Confidence 4899999999999999999999 5899999999999999999999999999999999874 22 333311221
Q ss_pred CccccccEEEEecCcchH-H---HHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGGL-A---AAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~gl-~---~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~ 174 (312)
..++++|.||++.|.... . +.......+.+.+.+|..++|+.|+||++||++... ...+.+..++..+..+
T Consensus 252 ~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~ 326 (458)
T 1lvl_A 252 QLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWAIGDVAGEP-----MLAHRAMAQGEMVAEI 326 (458)
T ss_dssp CCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHH
T ss_pred eEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEEeeccCCCc-----ccHHHHHHHHHHHHHH
Confidence 146899999999995221 1 111001111116778888999999999999965432 3455677777777776
Q ss_pred H
Q psy11185 175 V 175 (312)
Q Consensus 175 ~ 175 (312)
.
T Consensus 327 i 327 (458)
T 1lvl_A 327 I 327 (458)
T ss_dssp H
T ss_pred h
Confidence 5
No 123
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.36 E-value=2.2e-12 Score=119.09 Aligned_cols=145 Identities=17% Similarity=0.269 Sum_probs=108.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCcc-chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRG-FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~-~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++ +++++. +++++.+.+.+.+++. |++++++.+.+++... .+.....++
T Consensus 158 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~~g------ 228 (449)
T 3kd9_A 158 YIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVTDA------ 228 (449)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEETT------
T ss_pred HHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEeCC------
Confidence 4899999999999999999999 588987 9999999999999999 9999999999987532 233334443
Q ss_pred CCccccccEEEEecCcc-hHHHHHHH-HHCCC-cEEEEeccCCCCCCcccccCCccccccc-----chhhHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSG-GLAAAKEA-AAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGC-----IPKKLMHQAALLGE 169 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~-----~~~~~~~~a~~~~~ 169 (312)
.++++|.||++.|.. ...+...+ .+.+. ..+.+|..++|+.|+||++||++..... ......+.+..+++
T Consensus 229 --~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~ 306 (449)
T 3kd9_A 229 --GEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGY 306 (449)
T ss_dssp --EEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHH
T ss_pred --CEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHH
Confidence 468999999999963 22222211 22222 2477888899999999999997643321 11245677778888
Q ss_pred HHHHHH
Q psy11185 170 AIKDAV 175 (312)
Q Consensus 170 ~~~~~~ 175 (312)
.+..+.
T Consensus 307 ~aa~~i 312 (449)
T 3kd9_A 307 VAGSNI 312 (449)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777765
No 124
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.34 E-value=2.6e-12 Score=124.30 Aligned_cols=146 Identities=24% Similarity=0.290 Sum_probs=97.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
..|++|||+|++|+.+|..+.+.+.+++++|+... .|+.+.... .++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~--------~gg~~~~~~-------------------------~~~ 419 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE--------IGGQFNIAK-------------------------QIP 419 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS--------SCTTHHHHT-------------------------TST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC--------CCCeeeccc-------------------------cCC
Confidence 47899999999999999999999999999997542 222111000 001
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEE-EcCeEEEccCCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTL-TAENILIATGGRPNYP 261 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i-~ad~vVlAtG~~p~~p 261 (312)
...++..+..+ +...+...++++..++... . ..+ .||+||+|||+.|+.|
T Consensus 420 ----~~~~~~~~~~~-----------~~~~~~~~gv~~~~~~~v~------------~--~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 420 ----GKEEFYETLRY-----------YRRMIEVTGVTLKLNHTVT------------A--DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ----TCTTHHHHHHH-----------HHHHHHHHTCEEEESCCCC------------S--SSSCCSSEEEECCCEEECCC
T ss_pred ----CHHHHHHHHHH-----------HHHHHHHcCCEEEeCcEec------------H--HHhhcCCEEEEccCCCcCCC
Confidence 11112111111 1233455688887654210 0 124 7999999999999999
Q ss_pred CCCCCCc-ceeccccccCC-CCCCCeEEEEcCchhhHHHHHHhhcCceeee
Q psy11185 262 DIPGAKE-HCISSDDIFSL-EKPPGKTLVVGAGYIGKLETWDSNSGCGNVT 310 (312)
Q Consensus 262 ~~~g~~~-~~~~~~~~~~~-~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~ 310 (312)
+++|.+. ..++..++... ...+++|+|||||.+|+|.|..|...+.+|+
T Consensus 471 ~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 471 PIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp CCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 9999864 24454444433 3457899999999999999999988776554
No 125
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.33 E-value=1.3e-12 Score=121.10 Aligned_cols=142 Identities=17% Similarity=0.205 Sum_probs=106.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccc-hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe--eccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGF-DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK--NVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~-~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~~ 95 (312)
.+|+|+|..|+++|.+||++++ +++|+.+ ++++.+.+.+.|+ |++++++.+++++..+++.+.+.+. +|+
T Consensus 182 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~--- 255 (466)
T 3l8k_A 182 YIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGS--- 255 (466)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSC---
T ss_pred HHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCc---
Confidence 5899999999999999999999 5899998 9999999999887 9999999999998754244566665 231
Q ss_pred cCCCccccccEEEEecCcch---HHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSGG---LAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIK 172 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~g---l~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~ 172 (312)
..++++|.||++.|... +.+.....+.+.+.+.+|..++|+.|+||++||++... ...+.+..++..+.
T Consensus 256 ---~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa 327 (466)
T 3l8k_A 256 ---KKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGDANGLA-----PYYHAAVRMSIAAA 327 (466)
T ss_dssp ---CEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCCTTCBCSSTTEEECGGGTCSC-----CSHHHHHHHHHHHH
T ss_pred ---eEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeECCCccCCCCCEEEEEecCCCC-----ccHhHHHHHHHHHH
Confidence 13689999999999522 21221112222222778888999999999999965432 34566777777777
Q ss_pred HHH
Q psy11185 173 DAV 175 (312)
Q Consensus 173 ~~~ 175 (312)
.+.
T Consensus 328 ~~i 330 (466)
T 3l8k_A 328 NNI 330 (466)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 126
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.32 E-value=5e-12 Score=120.82 Aligned_cols=146 Identities=27% Similarity=0.436 Sum_probs=104.0
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEc-----CC---CeeEEEE--e
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKL-----AD---GKLKVQY--K 89 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~-----~~---~~~~v~~--~ 89 (312)
.+|+|+|..|+++|.+||+++|+.+++.+++++.+.+.+.|++.||++++++.+.+++.. .+ +.+.+.+ .
T Consensus 296 ~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~ 375 (598)
T 2x8g_A 296 YVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT 375 (598)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEET
T ss_pred HHHHHHHHHHHHcCCEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeC
Confidence 589999999999999999999988889999999999999999999999999988888643 11 3333433 2
Q ss_pred eccccccCCCccccccEEEEecCcch-HH---HHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHH
Q psy11185 90 NVAEVRQDNTHKYDYDLLVLGGGSGG-LA---AAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQA 164 (312)
Q Consensus 90 ~~~~~~~~~~~~~~~d~vivg~G~~g-l~---~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a 164 (312)
++.. ..+++|.||++.|... .. +.....+.+. ..+.+|..++|+.|+|||+||++...+ ...+.+
T Consensus 376 ~g~~------~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~----~~~~~A 445 (598)
T 2x8g_A 376 DGKK------FEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKP----QLTPVA 445 (598)
T ss_dssp TSCE------EEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSC----CCHHHH
T ss_pred CCcE------EeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCC----ccHHHH
Confidence 3310 2345999999999532 11 1111111222 247778888999999999999754432 244556
Q ss_pred HHHHHHHHHHH
Q psy11185 165 ALLGEAIKDAV 175 (312)
Q Consensus 165 ~~~~~~~~~~~ 175 (312)
..+++.+..+.
T Consensus 446 ~~~g~~aa~~i 456 (598)
T 2x8g_A 446 IQAGRYLARRL 456 (598)
T ss_dssp HHHHHHHHHHH
T ss_pred HHhHHHHHHHH
Confidence 66777666654
No 127
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.32 E-value=9.7e-13 Score=118.93 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=99.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCcc-chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRG-FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~-~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|++||++++ +++++. +++++.+.+.+.+++.||++++++.+.++ +
T Consensus 156 ~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i--------------g------ 215 (385)
T 3klj_A 156 ILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM--------------G------ 215 (385)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC--------------H------
T ss_pred HHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc--------------C------
Confidence 4899999999999999999999 588876 89999999999999999999999988865 2
Q ss_pred CCccccccEEEEecCcch-HHHHHH-HHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKE-AAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~-~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~ 175 (312)
..+++|.||++.|... ..++.. ....+ +.+.+|..++|+.|+|||+||++...+.. ......+..+++.+..+.
T Consensus 216 --~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-~~~~~~A~~qg~~aa~~i 291 (385)
T 3klj_A 216 --DLIRSSCVITAVGVKPNLDFIKDTEIASK-RGILVNDHMETSIKDIYACGDVAEFYGKN-PGLINIANKQGEVAGLNA 291 (385)
T ss_dssp --HHHHHSEEEECCCEEECCGGGTTSCCCBS-SSEEECTTCBCSSTTEEECGGGEEETTBC-CCCHHHHHHHHHHHHHHH
T ss_pred --eEEecCeEEECcCcccChhhhhhcCCCcC-CCEEECCCcccCCCCEEEEEeeEecCCCc-ccHHHHHHHHHHHHHHHh
Confidence 4678999999999521 111111 11122 23788889999999999999976543321 123455666677666654
No 128
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.32 E-value=3.5e-12 Score=117.60 Aligned_cols=146 Identities=19% Similarity=0.163 Sum_probs=106.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-cchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-GFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+|||+++ +++++ .+++++.+.+.+.+++.||++++++.+++++.+ +....+.+ ++
T Consensus 159 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~------ 230 (447)
T 1nhp_A 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DK------ 230 (447)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SS------
T ss_pred HHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CC------
Confidence 4799999999999999999999 58887 689999999999999999999999999999753 22113443 32
Q ss_pred CCccccccEEEEecCcch-HHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCccccccc-----chhhHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGC-----IPKKLMHQAALLGEA 170 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~-----~~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... ......+.+.+. ..+.+|.+++|+.|+||++||++..... ......+.+..++..
T Consensus 231 --~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~ 308 (447)
T 1nhp_A 231 --NAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRF 308 (447)
T ss_dssp --CEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHH
T ss_pred --CEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHH
Confidence 4688999999999522 111111122222 3477888899999999999997643211 012356677778887
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 309 aa~~i 313 (447)
T 1nhp_A 309 AVKNL 313 (447)
T ss_dssp HHHTS
T ss_pred HHHhh
Confidence 77654
No 129
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.31 E-value=3e-12 Score=119.08 Aligned_cols=146 Identities=16% Similarity=0.131 Sum_probs=106.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++++++.+++++.+ +....+.+ ++
T Consensus 196 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~-~~------- 266 (480)
T 3cgb_A 196 AIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVET-DK------- 266 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEE-TT-------
T ss_pred HHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEE-CC-------
Confidence 4799999999999999999999 58899999999999999999999999999999999753 22112333 22
Q ss_pred CccccccEEEEecCcch-HHHHHHH-HHCC-CcEEEEeccCCCCCCcccccCCcccccccc-----hhhHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEA-AAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCI-----PKKLMHQAALLGEA 170 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~-~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~-----~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... ..+...+ .+.+ ...+.+|..++|+.|+|||+||++...... .....+.+..++..
T Consensus 267 -~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~ 345 (480)
T 3cgb_A 267 -GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRL 345 (480)
T ss_dssp -EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHH
T ss_pred -CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHH
Confidence 3679999999999532 1111111 1112 134778888999999999999976443211 11346677777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 346 aa~~i 350 (480)
T 3cgb_A 346 AGLNM 350 (480)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77765
No 130
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.30 E-value=3.7e-12 Score=117.54 Aligned_cols=152 Identities=26% Similarity=0.298 Sum_probs=94.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
...|++|||+|++|+.+|..|.+.+.+++++|+... .|+.. .++.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~--------~GG~l-------------------------~~gi-- 165 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR--------MGGLL-------------------------VYGI-- 165 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS--------CSTHH-------------------------HHTS--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC--------CCCee-------------------------eecC--
Confidence 357999999999999999999999999999997532 23210 0111
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCC-CCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGR-PNY 260 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~-p~~ 260 (312)
+. ...+.. +.. .....+...++++..++.. . . .++.+++ .+.||+||+|||+. |+.
T Consensus 166 p~---~~~~~~-~~~-----------~~~~~l~~~gv~~~~~~~v--~-~--~v~~~~~---~~~~d~vvlAtG~~~~~~ 222 (456)
T 2vdc_G 166 PG---FKLEKS-VVE-----------RRVKLLADAGVIYHPNFEV--G-R--DASLPEL---RRKHVAVLVATGVYKARD 222 (456)
T ss_dssp CT---TTSCHH-HHH-----------HHHHHHHHTTCEEETTCCB--T-T--TBCHHHH---HSSCSEEEECCCCCEECC
T ss_pred CC---ccCCHH-HHH-----------HHHHHHHHCCcEEEeCCEe--c-c--EEEhhHh---HhhCCEEEEecCCCCCCC
Confidence 10 111111 111 1123355678888766532 1 1 1222333 35699999999986 777
Q ss_pred CCCCCCCcc-eeccccc----------c--------CCCCCCCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 261 PDIPGAKEH-CISSDDI----------F--------SLEKPPGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 261 p~~~g~~~~-~~~~~~~----------~--------~~~~~~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
|+++|.+.. .++..++ . .....+++|+|||||++|+|+|..+.. ++++|++
T Consensus 223 ~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vti 293 (456)
T 2vdc_G 223 IKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKC 293 (456)
T ss_dssp TTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEE
Confidence 889987532 2211111 0 122467899999999999998877554 4556876
No 131
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.28 E-value=1.2e-11 Score=114.26 Aligned_cols=145 Identities=14% Similarity=0.186 Sum_probs=91.4
Q ss_pred cccEEEEecCcchHHHHHHHHH-C------CCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHH
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAA-H------GRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~-~------~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~ 175 (312)
.+|++|||+|++|+.+|..+.+ . +.+++++|+... .|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~--------~gg~~~------------------------ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT--------PWGLVR------------------------ 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS--------CSTHHH------------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC--------CCCccc------------------------
Confidence 4689999999999999999988 6 778999997532 122110
Q ss_pred HcCCccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccC
Q psy11185 176 AYGWEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATG 255 (312)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG 255 (312)
++. .+ .+.....+.. .+...+...+++++.+.. ++ . .++..++ .+.||+||+|||
T Consensus 51 -~gv-~p----~~~~~~~~~~-----------~~~~~~~~~~v~~~~~v~--v~-~--~v~~~~~---~~~~d~lViAtG 105 (456)
T 1lqt_A 51 -SGV-AP----DHPKIKSISK-----------QFEKTAEDPRFRFFGNVV--VG-E--HVQPGEL---SERYDAVIYAVG 105 (456)
T ss_dssp -HTS-CT----TCTGGGGGHH-----------HHHHHHTSTTEEEEESCC--BT-T--TBCHHHH---HHHSSEEEECCC
T ss_pred -ccc-CC----CCCCHHHHHH-----------HHHHHHhcCCCEEEeeEE--EC-C--EEEECCC---eEeCCEEEEeeC
Confidence 110 00 0111111111 122335567888875532 22 1 1333444 478999999999
Q ss_pred CC-CCCCCCCCCCcc-eeccccc-----------cCCC-CCCCeEEEEcCchhhHHHHHHhhc
Q psy11185 256 GR-PNYPDIPGAKEH-CISSDDI-----------FSLE-KPPGKTLVVGAGYIGKLETWDSNS 304 (312)
Q Consensus 256 ~~-p~~p~~~g~~~~-~~~~~~~-----------~~~~-~~~~~v~VvG~G~sa~~~a~~l~~ 304 (312)
+. |+.|++||.+.. .+++.++ .... ..+++|+|||+|++|+|.|..|..
T Consensus 106 ~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~ 168 (456)
T 1lqt_A 106 AQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLT 168 (456)
T ss_dssp CCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHh
Confidence 97 788889997532 3333332 1222 257789999999999999998876
No 132
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.27 E-value=8.6e-12 Score=115.29 Aligned_cols=145 Identities=15% Similarity=0.201 Sum_probs=90.6
Q ss_pred ccccEEEEecCcchHHHHHHHHHCC--CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHG--RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGW 179 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~--~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 179 (312)
...|++|||+|++|+.+|..+.+.+ .+++++|+... .|++. ..++.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~--------~gg~~-~~g~~----------------------- 52 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV--------PFGLV-RFGVA----------------------- 52 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS--------SCTHH-HHTSC-----------------------
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc--------CCcee-ecccC-----------------------
Confidence 3579999999999999999998877 78999997542 12211 10000
Q ss_pred ccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC-
Q psy11185 180 EIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP- 258 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p- 258 (312)
+ .+.....+.. .+...+...++++..+... . . .++..+. .+.||+||+|||+.|
T Consensus 53 --p----~~~~~~~~~~-----------~~~~~~~~~gv~~~~~~~v--~-~--~V~~~~~---~~~~d~lVlAtGs~~~ 107 (460)
T 1cjc_A 53 --P----DHPEVKNVIN-----------TFTQTARSDRCAFYGNVEV--G-R--DVTVQEL---QDAYHAVVLSYGAEDH 107 (460)
T ss_dssp --T----TCGGGGGHHH-----------HHHHHHTSTTEEEEBSCCB--T-T--TBCHHHH---HHHSSEEEECCCCCEE
T ss_pred --C----CCccHHHHHH-----------HHHHHHHhCCcEEEeeeEE--e-e--EEEeccc---eEEcCEEEEecCcCCC
Confidence 0 0111111111 1223456678888765421 1 1 1223332 468999999999985
Q ss_pred CCCCCCCCCcc-eeccccc----------cCCC--CCCCeEEEEcCchhhHHHHHHhh
Q psy11185 259 NYPDIPGAKEH-CISSDDI----------FSLE--KPPGKTLVVGAGYIGKLETWDSN 303 (312)
Q Consensus 259 ~~p~~~g~~~~-~~~~~~~----------~~~~--~~~~~v~VvG~G~sa~~~a~~l~ 303 (312)
+.|++||.+.. ++++.++ .... ..+++|+|||+|++|+|+|..|.
T Consensus 108 ~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~ 165 (460)
T 1cjc_A 108 QALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILL 165 (460)
T ss_dssp CCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHh
Confidence 77899997532 3333333 1221 24688999999999999999987
No 133
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.27 E-value=2.7e-11 Score=106.31 Aligned_cols=128 Identities=14% Similarity=0.113 Sum_probs=91.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccc-cccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAE-VRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~-~~~~ 97 (312)
.+|+|+|..|+++|.+||+++++ .++ .++.+.+.+.+.+++.||++++++.+.+++.+.+....+.+.+... +
T Consensus 155 ~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g--- 229 (320)
T 1trb_A 155 NTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSD--- 229 (320)
T ss_dssp HHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCC---
T ss_pred HHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCC---
Confidence 48999999999999999999995 443 3677888888999999999999999999986543322466654210 1
Q ss_pred CCccccccEEEEecCcch-HHHHHHHHHCCCcEEEEeccC-----CCCCCcccccCCcccc
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEAAAHGRKVIVLDYVI-----PSPQGTTWGLGGTCVN 152 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~~~~~~~~~~ve~~~-----~~~~~~v~a~Gd~~~~ 152 (312)
....+++|.||++.|... ..+.......+...+.+|..+ +++.|+||++||++..
T Consensus 230 ~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~ 290 (320)
T 1trb_A 230 NIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDH 290 (320)
T ss_dssp CCEEEECSEEEECSCEEESCGGGTTTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCS
T ss_pred ceEEEEcCEEEEEeCCCCChHHhcccccccCceEEECCCcccccccCCCCCEEEcccccCC
Confidence 014689999999999521 111110111123456777764 8999999999996554
No 134
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.26 E-value=9e-12 Score=121.49 Aligned_cols=156 Identities=19% Similarity=0.290 Sum_probs=98.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
..|++|||+|++|+.+|..+.+.+.+++++|+... .|+.+......
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~--------~GG~~~~~~~~-------------------------- 434 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK--------IGGHLNQVAAL-------------------------- 434 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS--------TTTTHHHHTTS--------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC--------cCCeeeecccC--------------------------
Confidence 46899999999999999999999999999997543 23322111100
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCC-----
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGR----- 257 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~----- 257 (312)
+...++..+..+.....+.+ ......++++..+. .++..++ ..+.||+||+|||+.
T Consensus 435 ---pg~~~~~~~~~~~~~~i~~~-----~~~~~~~v~i~~~~---------~v~~~~~--~~~~~d~vviAtG~~~~~~~ 495 (729)
T 1o94_A 435 ---PGLGEWSYHRDYRETQITKL-----LKKNKESQLALGQK---------PMTADDV--LQYGADKVIIATGARWNTDG 495 (729)
T ss_dssp ---TTCGGGHHHHHHHHHHHHHH-----HHHSTTCEEECSCC---------CCCHHHH--HTSCCSEEEECCCEEECSSC
T ss_pred ---CChHHHHHHHHHHHHHHHHh-----hcccCCceEEEeCe---------EEehhhc--cccCCCEEEEcCCCCccccc
Confidence 01123333333322221111 01122345543221 2233344 468899999999987
Q ss_pred ---CCCCCCCCCCc---ceeccccccCCC-CCCCeEEEEc--CchhhHHHHHHhhcCceeeee
Q psy11185 258 ---PNYPDIPGAKE---HCISSDDIFSLE-KPPGKTLVVG--AGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 ---p~~p~~~g~~~---~~~~~~~~~~~~-~~~~~v~VvG--~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|..|+++|.+. ..++..++.... ..+++|+||| ||.+|+|.|..|...+.+|++
T Consensus 496 ~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtl 558 (729)
T 1o94_A 496 TNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTI 558 (729)
T ss_dssp CCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEE
T ss_pred ccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEE
Confidence 56688998862 245555544433 3456899999 999999999999888888886
No 135
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.26 E-value=3.4e-12 Score=117.32 Aligned_cols=149 Identities=21% Similarity=0.317 Sum_probs=94.0
Q ss_pred ccEEEEecCcchHHHHHHHHH---CCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAA---HGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~---~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
.|+||||+|++|+.+|..+.+ .+.+++++|+.... ...+. ... ...+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~------------~~~~~----~~~------------~~~g~- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF------------QFVPS----NPW------------VGVGW- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE------------ECGGG----HHH------------HHHTS-
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC------------cccCC----ccc------------cccCc-
Confidence 589999999999999999988 78899999974310 00000 000 00010
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNY 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~ 260 (312)
.+.. .+...+...+...+++++.+.+..++.....+++.+| .++.||+||+|||+.|+.
T Consensus 56 --------~~~~-----------~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 56 --------KERD-----------DIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADG--NTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp --------SCHH-----------HHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCCEECG
T ss_pred --------cCHH-----------HHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCC--CEEECCEEEECCCCCcCc
Confidence 0000 1111122345667999988877777765556777788 679999999999999999
Q ss_pred CCCCCCCcc------eeccccccCCC------CCCCeEEEEcCchhh------HHHHHHh
Q psy11185 261 PDIPGAKEH------CISSDDIFSLE------KPPGKTLVVGAGYIG------KLETWDS 302 (312)
Q Consensus 261 p~~~g~~~~------~~~~~~~~~~~------~~~~~v~VvG~G~sa------~~~a~~l 302 (312)
|++||.+.+ ..+..+...+. ..+++++|||+|++| +|.+..+
T Consensus 115 ~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~l 174 (437)
T 3sx6_A 115 ENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIV 174 (437)
T ss_dssp GGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHH
T ss_pred ccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHH
Confidence 999998642 12222222211 014567899997765 6766443
No 136
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.25 E-value=2.1e-11 Score=106.71 Aligned_cols=126 Identities=11% Similarity=0.033 Sum_probs=83.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
++|+|+|..|+++|++|||++|. +.+...+ ...+.+...+++.+..+.+.++.........+.+.+.... .
T Consensus 162 ~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~ 233 (314)
T 4a5l_A 162 DAAMEEALHLTKYGSKVIILHRRDAFRASKT-----MQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSG---E 233 (314)
T ss_dssp HHHHHHHHHHTTTSSEEEEECSSSSCCSCHH-----HHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTC---C
T ss_pred hHHHHHHHHHHHhCCeeeeecccccccccch-----hhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccc---c
Confidence 59999999999999999999984 4433322 2244556678888888888888765443334444432211 1
Q ss_pred CccccccEEEEecCcch-HHHHHHHHHCCCcEEEEeccCCCCCCcccccCCccccc
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNV 153 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~ 153 (312)
..++++|.++++.|... ..+.........+.+++++.++|+.|+|||+||++...
T Consensus 234 ~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~ 289 (314)
T 4a5l_A 234 YKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGPKTSVDGVFACGDVCDRV 289 (314)
T ss_dssp EEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCBTTBCSSTTEEECSTTTCSS
T ss_pred ceeeccccceEecccccChhHhcccceEcCCeeEeCCCCccCCCCEEEEEeccCCc
Confidence 25789999999999521 11111112223344557778899999999999976543
No 137
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.25 E-value=2.9e-11 Score=121.17 Aligned_cols=163 Identities=18% Similarity=0.201 Sum_probs=98.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|+||||+|++|+.+|..+.+.+.+++++|+... .|+.|.. + + + ..+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~--------~GG~~~~--~-~-k-------------------~~i 175 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE--------AGGTLLD--T-A-G-------------------EQI 175 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS--------SSGGGGG--S-S-C-------------------CEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC--------CCceecc--C-C-c-------------------ccc
Confidence 358999999999999999999999999999997542 2332221 0 0 0 000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhc-CCceEEece-eEEeeCCe-----------EEEEec----CCCeEE
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRD-KKVDYLNAL-GKFIDQHS-----------VEATMK----NGEKKT 244 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~~~~~~-~~~~~~~~-----------~~v~~~----~G~~~~ 244 (312)
.. . .. ..+.. .+...+.. .++++..++ +..+.... +.+... +++...
T Consensus 176 ~~----~-~~---~~~~~--------~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~ 239 (965)
T 2gag_A 176 DG----M-DS---SAWIE--------QVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWH 239 (965)
T ss_dssp TT----E-EH---HHHHH--------HHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEE
T ss_pred CC----C-CH---HHHHH--------HHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEE
Confidence 00 0 00 01110 11122333 377776553 33222211 111110 122257
Q ss_pred EEcCeEEEccCCCCCCCCCCCCCcc-eeccccc---cC-CCC-CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 245 LTAENILIATGGRPNYPDIPGAKEH-CISSDDI---FS-LEK-PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 245 i~ad~vVlAtG~~p~~p~~~g~~~~-~~~~~~~---~~-~~~-~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.||+||+|||+.|+.|++||.+.. .+++..+ .. ... .+++|+|||+|.+|+|+|..|...+.+|+|
T Consensus 240 i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtv 312 (965)
T 2gag_A 240 IRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAV 312 (965)
T ss_dssp EEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEE
T ss_pred EECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEE
Confidence 9999999999999999999988643 3333222 21 222 347899999999999999998887777876
No 138
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.24 E-value=3.6e-11 Score=105.29 Aligned_cols=143 Identities=14% Similarity=0.057 Sum_probs=89.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
+||+|+|..|+++|.+|||++| +++++..+.. .+.+++.++.+.....+.................... ..
T Consensus 155 ~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 226 (312)
T 4gcm_A 155 DSAVEEGTFLTKFADKVTIVHRRDELRAQRILQ-----DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKD---GS 226 (312)
T ss_dssp HHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHH-----HHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTT---CC
T ss_pred HHHHHHHHHHHhcCCEEEEEecccccCcchhHH-----HHHHHhcCcceeeecceeeeeccccccccceeeeecC---Cc
Confidence 5899999999999999999999 5777654433 4566778888888777766654322111111111111 11
Q ss_pred CccccccEEEEecCcch-HHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~ 174 (312)
...+++|.|+++.|... ..+...+ .......+++|+.++|+.|+|||+||++.... ...+.+..+++....+
T Consensus 227 ~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~----~~~~~A~~~G~~AA~~ 300 (312)
T 4gcm_A 227 EETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGL----RQIVTATGDGSIAAQS 300 (312)
T ss_dssp EEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSC----CSHHHHHHHHHHHHHH
T ss_pred eeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcc----hHHHHHHHHHHHHHHH
Confidence 24678999999999522 1111111 12223347888999999999999999654322 2344555555555443
No 139
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.23 E-value=3.6e-11 Score=106.26 Aligned_cols=124 Identities=15% Similarity=0.057 Sum_probs=90.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe---eccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK---NVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~---~~~~~~ 95 (312)
.+|+|+|..|++.|.+||+++|+ ++++. ++..+.+.+.+++.||++++++.+.+++.+ +....+.+. +++.
T Consensus 162 ~~g~e~a~~l~~~g~~V~~v~~~~~~~~~--~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~-- 236 (335)
T 2zbw_A 162 DSAVDWALNLLDTARRITLIHRRPQFRAH--EASVKELMKAHEEGRLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEE-- 236 (335)
T ss_dssp HHHHHHHHHTTTTSSEEEEECSSSSCCSC--HHHHHHHHHHHHTTSSEEETTEEEEEEEES-SSEEEEEEEETTTCCE--
T ss_pred HHHHHHHHHHHhhCCEEEEEEcCCccCcc--HHHHHHHHhccccCCeEEecCCcceeEccC-CCeeEEEEEECCCCce--
Confidence 58999999999999999999995 55443 466788888899999999999999999863 332356665 3311
Q ss_pred cCCCccccccEEEEecCcch-HHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccc
Q psy11185 96 QDNTHKYDYDLLVLGGGSGG-LAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVN 152 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~g-l~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~ 152 (312)
.++++|.||++.|... ..+...+ ...+...+.+|..++++.|+||++||++..
T Consensus 237 ----~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~ 291 (335)
T 2zbw_A 237 ----LALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTY 291 (335)
T ss_dssp ----EEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEEC
T ss_pred ----EEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEecccccc
Confidence 4678999999999522 1111111 111224577888889999999999997654
No 140
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.20 E-value=5.6e-12 Score=117.66 Aligned_cols=88 Identities=24% Similarity=0.307 Sum_probs=62.0
Q ss_pred cCCceEEece-eEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCCCCCCC--c---c---eeccccccCCC---CC
Q psy11185 215 DKKVDYLNAL-GKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAK--E---H---CISSDDIFSLE---KP 282 (312)
Q Consensus 215 ~~gV~~~~~~-~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~~~g~~--~---~---~~~~~~~~~~~---~~ 282 (312)
..+|+++.++ +..++....++++.+| .++.||+||+|||+.|+.|++++.. . . ..+.+++..+. ..
T Consensus 102 ~~gv~~~~g~~v~~id~~~~~V~~~~g--~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~ 179 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDNMVKLNDG--SQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE 179 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGTEEEETTS--CEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHH
T ss_pred cCCeEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhc
Confidence 5688988774 5555544445666778 6799999999999999887765531 1 1 12333333222 24
Q ss_pred CCeEEEEcCchhhHHHHHHhhc
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNS 304 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~ 304 (312)
+++|+|||+|++|+|.|..|..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~ 201 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGR 201 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHh
Confidence 7899999999999999998875
No 141
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.19 E-value=4.2e-11 Score=111.70 Aligned_cols=146 Identities=17% Similarity=0.186 Sum_probs=102.0
Q ss_pred hhhhhhhHhhhc----cCCeEEEEEc-cCCC-ccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccc
Q psy11185 20 DSGLECAGFLNG----LGFNATVMIR-SVPL-RGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAE 93 (312)
Q Consensus 20 ~ig~E~A~~l~~----~g~~vtl~~~-~~~l-~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 93 (312)
.+|+|+|..|++ +|.+||++++ ++++ +.+++++.+.+.+.+++.||++++++.+++++.. ++.+.+.+.++
T Consensus 190 ~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~~v~l~dG-- 266 (493)
T 1m6i_A 190 FLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKLLIKLKDG-- 266 (493)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEEEEEETTS--
T ss_pred HHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeEEEEECCC--
Confidence 489999999987 5789999998 4544 4578889999999999999999999999999754 33355666655
Q ss_pred cccCCCccccccEEEEecCcc-hHHHHHHH-HHCC--CcEEEEeccCCCCCCcccccCCcccccccc----hhhHHHHHH
Q psy11185 94 VRQDNTHKYDYDLLVLGGGSG-GLAAAKEA-AAHG--RKVIVLDYVIPSPQGTTWGLGGTCVNVGCI----PKKLMHQAA 165 (312)
Q Consensus 94 ~~~~~~~~~~~d~vivg~G~~-gl~~a~~~-~~~~--~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~----~~~~~~~a~ 165 (312)
.++++|.||++.|.. ...++..+ ...+ ...+++|..+++ .|+|||+||++...... .......+.
T Consensus 267 ------~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~ 339 (493)
T 1m6i_A 267 ------RKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAV 339 (493)
T ss_dssp ------CEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHH
T ss_pred ------CEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHH
Confidence 578999999999952 12222222 2222 134667887887 69999999976542110 011233566
Q ss_pred HHHHHHHHHH
Q psy11185 166 LLGEAIKDAV 175 (312)
Q Consensus 166 ~~~~~~~~~~ 175 (312)
.++..+..+.
T Consensus 340 ~qg~~aa~ni 349 (493)
T 1m6i_A 340 VSGRLAGENM 349 (493)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6777666654
No 142
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.18 E-value=3.6e-12 Score=119.01 Aligned_cols=155 Identities=20% Similarity=0.293 Sum_probs=93.2
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccCC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPN 183 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 183 (312)
-.+||||+|++|+.+|..|.+.+.+++++|+... ..| .+.++. ...| .+..
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~----~~~--------~PlL~~----------------va~G-~l~~ 93 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY----FLF--------TPLLPS----------------APVG-TVDE 93 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE----EEC--------GGGGGG----------------TTTT-SSCG
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC----ccc--------ccchhH----------------Hhhc-cccH
Confidence 3699999999999999999877889999997421 000 000000 0000 0000
Q ss_pred ccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeC--CeEEEEec----------------CCCeEEE
Q psy11185 184 VKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQ--HSVEATMK----------------NGEKKTL 245 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~--~~~~v~~~----------------~G~~~~i 245 (312)
.....+...+ ......+++++.+.+..++. ..+++... .++..++
T Consensus 94 -~~i~~p~~~~----------------~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i 156 (502)
T 4g6h_A 94 -KSIIEPIVNF----------------ALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEI 156 (502)
T ss_dssp -GGGEEEHHHH----------------HTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEE
T ss_pred -HHhhhhHHHH----------------HHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEE
Confidence 0000000000 11234578888888776664 34444321 1223789
Q ss_pred EcCeEEEccCCCCCCCCCCCCCcceeccccc---cCC---------------CC-----CCCeEEEEcCchhhHHHHHHh
Q psy11185 246 TAENILIATGGRPNYPDIPGAKEHCISSDDI---FSL---------------EK-----PPGKTLVVGAGYIGKLETWDS 302 (312)
Q Consensus 246 ~ad~vVlAtG~~p~~p~~~g~~~~~~~~~~~---~~~---------------~~-----~~~~v~VvG~G~sa~~~a~~l 302 (312)
.||+||||||+.|+.|++||..++.+..... ..+ .. ...+++|||||++|+|.|.+|
T Consensus 157 ~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l 236 (502)
T 4g6h_A 157 KYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGEL 236 (502)
T ss_dssp ECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHH
T ss_pred eCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHH
Confidence 9999999999999999999986553322221 110 00 123799999999999999887
Q ss_pred hc
Q psy11185 303 NS 304 (312)
Q Consensus 303 ~~ 304 (312)
..
T Consensus 237 ~~ 238 (502)
T 4g6h_A 237 QD 238 (502)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 143
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.18 E-value=2.2e-11 Score=118.20 Aligned_cols=151 Identities=23% Similarity=0.313 Sum_probs=100.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+... .|+.+.. ...+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~--------~GG~~~~---------------------~~~~---- 436 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRD--------LGGRVTQ---------------------ESAL---- 436 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS--------SCTHHHH---------------------HHTS----
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC--------CCCEeee---------------------ccCC----
Confidence 357899999999999999999999999999997542 3331110 0000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcC-CceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCC---
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDK-KVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGR--- 257 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~--- 257 (312)
+...++..+..+.. ..+... ++++..++. +...++ .++.+|+||+|||+.
T Consensus 437 ----p~~~~~~~~~~~~~-----------~~~~~~~gv~~~~~~~---------v~~~~~--~~~~~d~lvlAtG~~~~~ 490 (690)
T 3k30_A 437 ----PGLSAWGRVKEYRE-----------AVLAELPNVEIYRESP---------MTGDDI--VEFGFEHVITATGATWRT 490 (690)
T ss_dssp ----TTCGGGGHHHHHHH-----------HHHHTCTTEEEESSCC---------CCHHHH--HHTTCCEEEECCCEEECS
T ss_pred ----CchhHHHHHHHHHH-----------HHHHHcCCCEEEECCe---------ecHHHH--hhcCCCEEEEcCCCcccc
Confidence 11223333333322 233444 777765432 222333 567899999999987
Q ss_pred -----CCCCCCCCCCc-ceeccccccCCC-CCCCeEEEEc--CchhhHHHHHHhhcCceeeee
Q psy11185 258 -----PNYPDIPGAKE-HCISSDDIFSLE-KPPGKTLVVG--AGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 258 -----p~~p~~~g~~~-~~~~~~~~~~~~-~~~~~v~VvG--~G~sa~~~a~~l~~~~~~V~~ 311 (312)
|..|+++|.+. ..++..++.... ..+++|+||| +|.+|+|.+..|...+.+|++
T Consensus 491 ~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtl 553 (690)
T 3k30_A 491 DGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSI 553 (690)
T ss_dssp SCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEE
T ss_pred ccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEE
Confidence 45688888754 345555555443 3456799999 999999999999988888886
No 144
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.18 E-value=3.1e-11 Score=121.78 Aligned_cols=154 Identities=19% Similarity=0.243 Sum_probs=96.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
...|++|||+|++|+.+|..|.+.|. +++++|+... .|+.+. ++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~--------~GG~~~-------------------------~~i- 231 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY--------VGGLST-------------------------SEI- 231 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS--------CSTHHH-------------------------HTS-
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC--------CCcccc-------------------------ccC-
Confidence 35799999999999999999999998 6999997432 333110 110
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCC-CCC
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGG-RPN 259 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~-~p~ 259 (312)
+. +..... +..+ ....+...||++..++... .+. ++..++ ..+.||+||+|||+ .|+
T Consensus 232 -p~---~~~~~~-~~~~-----------~~~~~~~~gv~~~~~~~v~--~~~--v~~~~~--~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 232 -PQ---FRLPYD-VVNF-----------EIELMKDLGVKIICGKSLS--ENE--ITLNTL--KEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp -CT---TTSCHH-HHHH-----------HHHHHHTTTCEEEESCCBS--TTS--BCHHHH--HHTTCCEEEECCCCCEEC
T ss_pred -Cc---ccCCHH-HHHH-----------HHHHHHHCCcEEEcccEec--cce--EEhhhc--CccCCCEEEEecCCCCCC
Confidence 00 111111 1111 1234567799988776431 112 233344 45789999999998 588
Q ss_pred CCCC-CCCCc--ceeccccccC----------------CCCCCCeEEEEcCchhhHHHHHHhhcCc-eeeee
Q psy11185 260 YPDI-PGAKE--HCISSDDIFS----------------LEKPPGKTLVVGAGYIGKLETWDSNSGC-GNVTI 311 (312)
Q Consensus 260 ~p~~-~g~~~--~~~~~~~~~~----------------~~~~~~~v~VvG~G~sa~~~a~~l~~~~-~~V~~ 311 (312)
.+++ +|... ..+++.+++. +...+++|+|||||++|+|+|..+...+ ++||+
T Consensus 290 ~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtv 361 (1025)
T 1gte_A 290 TDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFL 361 (1025)
T ss_dssp CCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEE
Confidence 7664 45431 2333332221 1234679999999999999998876654 57876
No 145
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.15 E-value=7.8e-11 Score=105.28 Aligned_cols=145 Identities=14% Similarity=0.064 Sum_probs=97.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe--ecccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK--NVAEVRQ 96 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~~~ 96 (312)
.+|+|+|..|+++|.+|++++++ ++++. +.+.+.+.+.+++.||++++++.+.+++.+.+....+.+. +++
T Consensus 173 ~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~---- 246 (360)
T 3ab1_A 173 DSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGS---- 246 (360)
T ss_dssp HHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCC----
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCC----
Confidence 58999999999999999999995 55443 3556777788888999999999999998643322245554 331
Q ss_pred CCCccccccEEEEecCcch-HHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHH
Q psy11185 97 DNTHKYDYDLLVLGGGSGG-LAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 97 ~~~~~~~~d~vivg~G~~g-l~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~ 174 (312)
...+++|.||++.|... ..+...+ ...+...+.+|..++++.|+||++||++...+. ......+..++..+..+
T Consensus 247 --~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~ 322 (360)
T 3ab1_A 247 --KWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK--LKIIQTGLSEATMAVRH 322 (360)
T ss_dssp --EEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC--CCSHHHHHHHHHHHHHH
T ss_pred --eEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc--cceeehhHHHHHHHHHH
Confidence 14678999999999532 1111111 111224677888889999999999997653321 12334444455544443
No 146
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.14 E-value=1.1e-10 Score=102.63 Aligned_cols=123 Identities=17% Similarity=0.241 Sum_probs=87.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNT 99 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (312)
.+|+|+|..|++.|.+|++++++..+..++.. .+.|++.||++++++.+.+++.+.+ ...+.+.+...+. .
T Consensus 164 ~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~-----~~~l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~---~ 234 (332)
T 3lzw_A 164 DSAVDWALMLEPIAKEVSIIHRRDKFRAHEHS-----VENLHASKVNVLTPFVPAELIGEDK-IEQLVLEEVKGDR---K 234 (332)
T ss_dssp HHHHHHHHHHTTTBSEEEEECSSSSCSSCHHH-----HHHHHHSSCEEETTEEEEEEECSSS-CCEEEEEETTSCC---E
T ss_pred HhHHHHHHHHHhhCCeEEEEEecCcCCccHHH-----HHHHhcCCeEEEeCceeeEEecCCc-eEEEEEEecCCCc---e
Confidence 47999999999999999999995334444444 3457889999999999999986433 3567776632211 1
Q ss_pred ccccccEEEEecCcch-HHHHHHH-HHCCCcEEEEeccCCCCCCcccccCCccc
Q psy11185 100 HKYDYDLLVLGGGSGG-LAAAKEA-AAHGRKVIVLDYVIPSPQGTTWGLGGTCV 151 (312)
Q Consensus 100 ~~~~~d~vivg~G~~g-l~~a~~~-~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~ 151 (312)
.++++|.||++.|... ..+...+ .......+.+|..++++.|+||++||++.
T Consensus 235 ~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~ 288 (332)
T 3lzw_A 235 EILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICT 288 (332)
T ss_dssp EEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEE
T ss_pred EEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceec
Confidence 4688999999999532 1211110 11122457788889999999999999764
No 147
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.14 E-value=2.2e-10 Score=100.04 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=85.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhc-cceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAE-GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~-~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||+++++..+. +++. +.+.|++ .||++++++.++++..+.+....+.+.+...+.
T Consensus 154 ~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~--- 225 (310)
T 1fl2_A 154 NSGVEAAIDLAGIVEHVTLLEFAPEMK-ADQV----LQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD--- 225 (310)
T ss_dssp HHHHHHHHHHHTTBSEEEEECSSSSCC-SCHH----HHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCC---
T ss_pred HHHHHHHHHHHHhCCEEEEEEeCcccC-ccHH----HHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCc---
Confidence 479999999999999999999953332 4433 4555666 699999999999998643332256676532111
Q ss_pred CccccccEEEEecCcch-HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccc
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVN 152 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~ 152 (312)
..++++|.||++.|... ..+.......+ ...+.+|..++++.|+||++||++..
T Consensus 226 ~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~ 281 (310)
T 1fl2_A 226 IHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTV 281 (310)
T ss_dssp EEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBSC
T ss_pred EEEEEcCEEEEeeCCccCchHHhccccccCCCcEEcCCCCccCCCCEEEeecccCC
Confidence 13678999999999522 11111112222 23467788888999999999996654
No 148
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.13 E-value=5.1e-11 Score=108.15 Aligned_cols=146 Identities=13% Similarity=0.047 Sum_probs=103.4
Q ss_pred hhhhhhhhHhhhccC--CeEEEEEcc-CC--CccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccc
Q psy11185 19 VDSGLECAGFLNGLG--FNATVMIRS-VP--LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAE 93 (312)
Q Consensus 19 ~~ig~E~A~~l~~~g--~~vtl~~~~-~~--l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 93 (312)
+++++|+|.+|++.+ .+|+++++. .+ ++.+++.+.+.+.+.+++.||++++++++..++.+.+. ..+.+.++
T Consensus 166 ~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~-~~v~~~~g-- 242 (401)
T 3vrd_B 166 YERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA-MTVETSFG-- 242 (401)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT-TEEEETTS--
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc-eEEEcCCC--
Confidence 346778888887766 689999984 44 46688999999999999999999999999988765443 46666665
Q ss_pred cccCCCccccccEEEEecCcchHHHHHHH-HHCCCcEEEEecc-C-CCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 94 VRQDNTHKYDYDLLVLGGGSGGLAAAKEA-AAHGRKVIVLDYV-I-PSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 94 ~~~~~~~~~~~d~vivg~G~~gl~~a~~~-~~~~~~~~~ve~~-~-~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
+++++|.++++.|..+...+... .......+.+|+. + .++.|+|||+||++...+. ++..+.+..++..
T Consensus 243 ------~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~--pk~a~~A~~qa~v 314 (401)
T 3vrd_B 243 ------ETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPM--PKSAYSANSQAKV 314 (401)
T ss_dssp ------CEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTS--CBSHHHHHHHHHH
T ss_pred ------cEEEeeEEEEecCcCCchhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCC--CchHHHHHHHHHH
Confidence 57899999999996433322221 1112233666654 3 5889999999997754332 2455666777777
Q ss_pred HHHHH
Q psy11185 171 IKDAV 175 (312)
Q Consensus 171 ~~~~~ 175 (312)
+..+.
T Consensus 315 ~A~ni 319 (401)
T 3vrd_B 315 AAAAV 319 (401)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 149
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.13 E-value=1.3e-10 Score=103.94 Aligned_cols=125 Identities=11% Similarity=0.089 Sum_probs=86.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-------cchHHHHHHHHHHHhccc-eEEEeeceeeEEEEcCCCeeEEEEee
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-------GFDQQMAKLICEEMAEGG-VHFLHKCLPLSVTKLADGKLKVQYKN 90 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-------~~~~~~~~~~~~~l~~~g-i~~~~~~~v~~~~~~~~~~~~v~~~~ 90 (312)
.+|+|+|..|+++|.+||++++ +.+++ .+++.+.+.+.+.|++.| |++++++.+.+++..+ +...+.+.+
T Consensus 176 ~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~~~v~~~~ 254 (369)
T 3d1c_A 176 ESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-GQYHISFDS 254 (369)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEET-TEEEEEESS
T ss_pred cCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecC-CceEEEecC
Confidence 5889999999999999999999 46663 245777889999999997 9999999999986533 334566665
Q ss_pred ccccccCCCccc-cccEEEEecCcch-H-HHHHHHHHCCCcEEEEe-ccCCCCCCcccccCCccccc
Q psy11185 91 VAEVRQDNTHKY-DYDLLVLGGGSGG-L-AAAKEAAAHGRKVIVLD-YVIPSPQGTTWGLGGTCVNV 153 (312)
Q Consensus 91 ~~~~~~~~~~~~-~~d~vivg~G~~g-l-~~a~~~~~~~~~~~~ve-~~~~~~~~~v~a~Gd~~~~~ 153 (312)
+ +.+ .+|.+|+++|... . .+...+.......+.++ ..++++.|+||++||++...
T Consensus 255 g--------~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~ 313 (369)
T 3d1c_A 255 G--------QSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVEND 313 (369)
T ss_dssp S--------CCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCS
T ss_pred C--------eEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEeccccccC
Confidence 5 334 4599999999532 2 22222222222224444 45788999999999976543
No 150
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.13 E-value=1.6e-10 Score=105.25 Aligned_cols=139 Identities=16% Similarity=0.162 Sum_probs=97.1
Q ss_pred hhhhhhhHhhhccC----CeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccc
Q psy11185 20 DSGLECAGFLNGLG----FNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVR 95 (312)
Q Consensus 20 ~ig~E~A~~l~~~g----~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~ 95 (312)
+++.+++..+.+.| .+|+++++..+++.+++++.+.+.+.|++.||++++++.+++++.+ .+.+.++
T Consensus 184 e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-----~v~~~~g---- 254 (409)
T 3h8l_A 184 EMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH-----EIVDEKG---- 254 (409)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS-----EEEETTS----
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC-----eEEECCC----
Confidence 44444446777888 4999999955888899999999999999999999999999998532 3666665
Q ss_pred cCCCccccccEEEEecCcchHHHHHHH---HHCCCcEEEEeccCCC-CCCcccccCCcccccccchhhHHHHHHHHHHHH
Q psy11185 96 QDNTHKYDYDLLVLGGGSGGLAAAKEA---AAHGRKVIVLDYVIPS-PQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAI 171 (312)
Q Consensus 96 ~~~~~~~~~d~vivg~G~~gl~~a~~~---~~~~~~~~~ve~~~~~-~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~ 171 (312)
+++++|.+|++.|..+....... .......+.+|..+++ +.|+||++||++.... ++..+.+..++..+
T Consensus 255 ----~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~---~~~~~~A~~q~~~a 327 (409)
T 3h8l_A 255 ----NTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTV---PKLGYLAVMTGRIA 327 (409)
T ss_dssp ----CEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTCC---SCCHHHHHHHHHHH
T ss_pred ----CEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCCC---CcHHHHHHHHHHHH
Confidence 57899999999996433222211 1112233667777777 8999999999664311 13344455555555
Q ss_pred HHH
Q psy11185 172 KDA 174 (312)
Q Consensus 172 ~~~ 174 (312)
..+
T Consensus 328 a~~ 330 (409)
T 3h8l_A 328 AQH 330 (409)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 151
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.12 E-value=1.9e-10 Score=101.49 Aligned_cols=123 Identities=12% Similarity=0.068 Sum_probs=84.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhcc-ceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEG-GVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~-gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||+++++ ++++ .+.+.+.+.+. ||++++++.+.+++.+.+....+.+.+..++.
T Consensus 183 ~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~-- 254 (338)
T 3itj_A 183 DSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNE-- 254 (338)
T ss_dssp HHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTE--
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCc--
Confidence 68999999999999999999995 5554 23445556554 99999999999998755443357776622111
Q ss_pred CCccccccEEEEecCcch-HHHHHHHHHCC-Cc-EEEEeccCCCCCCcccccCCccc
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEAAAHG-RK-VIVLDYVIPSPQGTTWGLGGTCV 151 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~-~~~ve~~~~~~~~~v~a~Gd~~~ 151 (312)
...+++|.||++.|... ..+.......+ .. +.+++..++++.|+||++||++.
T Consensus 255 -~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~ 310 (338)
T 3itj_A 255 -ETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQD 310 (338)
T ss_dssp -EEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBCSSTTEEECGGGGC
T ss_pred -eEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCcccccCCCCEEEeeccCC
Confidence 14688999999999522 11111111222 22 33357888999999999999665
No 152
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.09 E-value=6.7e-11 Score=107.42 Aligned_cols=195 Identities=15% Similarity=0.114 Sum_probs=103.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCccc--ccccchhh--------HHH--HHHHHHHH
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCV--NVGCIPKK--------LMH--QAALLGEA 170 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~--~~~~~~~~--------~~~--~a~~~~~~ 170 (312)
++|++|||+|++|+.+|..+.+.|.+++++|+.......-.++.|+.|. ...+.+.. ... ........
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 5799999999999999999999999999999865321111112233331 11111110 000 00001111
Q ss_pred HHHHHHcCCccCC--ccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEe--e----CCeEEEEecCCC
Q psy11185 171 IKDAVAYGWEIPN--VKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFI--D----QHSVEATMKNGE 241 (312)
Q Consensus 171 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~--~----~~~~~v~~~~G~ 241 (312)
+.....++..+.. ....++. . ....+...+...+.+.|+++..++ +..+ + ...+.+++.+|
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~-~--------~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g- 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCD-E--------GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST- 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEET-T--------CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-
T ss_pred HHHHHhCCCceEECcCCEEccC-C--------CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-
Confidence 2222233432211 0001110 0 111222234445666789987665 3322 3 34577777665
Q ss_pred eEEEEcCeEEEccCCCCC--------------------CCCCCCCCcceecccc-c-cCC--CCCCCeEEEEc-------
Q psy11185 242 KKTLTAENILIATGGRPN--------------------YPDIPGAKEHCISSDD-I-FSL--EKPPGKTLVVG------- 290 (312)
Q Consensus 242 ~~~i~ad~vVlAtG~~p~--------------------~p~~~g~~~~~~~~~~-~-~~~--~~~~~~v~VvG------- 290 (312)
++.||.||+|||+.+. .|..|+...+..+..+ + ..+ ...+.++.|+|
T Consensus 154 --~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~ 231 (401)
T 2gqf_A 154 --QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALCGKSFYNQ 231 (401)
T ss_dssp --EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCEEEEE
T ss_pred --EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEEEEcCCceEEeC
Confidence 6999999999998773 2444554444333332 3 222 22345676669
Q ss_pred --------CchhhHHHHHHhhcCceeee
Q psy11185 291 --------AGYIGKLETWDSNSGCGNVT 310 (312)
Q Consensus 291 --------~G~sa~~~a~~l~~~~~~V~ 310 (312)
+|+.+++.+..+..+ ..|+
T Consensus 232 ~l~t~~g~sG~~~l~~s~~~~~~-~~~~ 258 (401)
T 2gqf_A 232 LLFTHRGISGPAVLQISNYWQPT-ESVE 258 (401)
T ss_dssp EEECSSEEESHHHHHHTTTCCTT-CCEE
T ss_pred EEEECCCccHHHHHHHHHHHhcC-CEEE
Confidence 899998888776553 3444
No 153
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.09 E-value=3.8e-10 Score=98.81 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=93.0
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|.+.|.+||+++++ ++++ +++ .+.+.+++.||++++++.+.+++.+ +....+.+.+...++
T Consensus 164 ~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~---~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~--- 234 (323)
T 3f8d_A 164 DSALEGAEILSSYSTKVYLIHRRDTFKA--QPI---YVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGE--- 234 (323)
T ss_dssp HHHHHHHHHHHHHSSEEEEECSSSSCCS--CHH---HHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCC---
T ss_pred HHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHH---HHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCCCc---
Confidence 47999999999999999999994 6655 332 2233334569999999999999864 333457776521111
Q ss_pred CccccccEEEEecCcchH-HHHHHH-HHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGGL-AAAKEA-AAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~gl-~~a~~~-~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
...+++|.||++.|.... .+...+ ...+ ...+.+|..++++.++||++||++... .+......+..++.....
T Consensus 235 ~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~ 310 (323)
T 3f8d_A 235 IKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAAT 310 (323)
T ss_dssp EEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCC--CcccceeehhhHHHHHHH
Confidence 136889999999996332 332222 1212 234677888899999999999965432 112334444555554444
No 154
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.09 E-value=1e-10 Score=106.41 Aligned_cols=140 Identities=22% Similarity=0.243 Sum_probs=84.5
Q ss_pred cEEEEecCcchHHHHHHHHH---CCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 105 DLLVLGGGSGGLAAAKEAAA---HGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~---~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
+++|||+|++|+.+|..+.+ .+.+++++|+..... ..+..+ ....+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~------------~~~~~~----------------~~~~~~~- 53 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSY------------FRPALP----------------HVAIGVR- 53 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEE------------ECCSSC----------------CCCSSCC-
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCce------------eccchh----------------hcccCCc-
Confidence 79999999999999999998 788999999754210 000000 0000000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCC--eEEEEecCCCeEEEEcCeEEEccCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQH--SVEATMKNGEKKTLTAENILIATGGRPN 259 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~--~~~v~~~~G~~~~i~ad~vVlAtG~~p~ 259 (312)
..... ...+...+.+.+++++.+.+..++.. .+.+...+++..++.||+||+|||+.|+
T Consensus 54 -~~~~~------------------~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 54 -DVDEL------------------KVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp -CCCCE------------------EEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred -CHHHH------------------HHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 00001 01122345567899988776666544 4444443333456999999999999999
Q ss_pred CCCCCCCCccee---ccccccCC----CCCCCeEEEEcCc
Q psy11185 260 YPDIPGAKEHCI---SSDDIFSL----EKPPGKTLVVGAG 292 (312)
Q Consensus 260 ~p~~~g~~~~~~---~~~~~~~~----~~~~~~v~VvG~G 292 (312)
.|+++|.+.... +..+...+ ....++++|||+|
T Consensus 115 ~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G 154 (409)
T 3h8l_A 115 TELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSG 154 (409)
T ss_dssp GGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEEC
T ss_pred ccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEec
Confidence 888998864322 22222211 1223667799999
No 155
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.08 E-value=3e-10 Score=99.14 Aligned_cols=140 Identities=14% Similarity=0.043 Sum_probs=91.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe--eccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK--NVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~~~~ 97 (312)
.+|+|+|..|.++|.+||+++++..++. ++++ +.+.+++.||++++++.+.+++.+.+....+.+. +++.
T Consensus 157 ~~~~e~a~~l~~~g~~v~~~~~~~~~~~-~~~~---~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~---- 228 (315)
T 3r9u_A 157 DTALEEALYLANICSKIYLIHRRDEFRA-APST---VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSI---- 228 (315)
T ss_dssp HHHHHHHHHHHTTSSEEEEECSSSSCBS-CHHH---HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCE----
T ss_pred HHHHHHHHHHHhhCCEEEEEEeCCCCCC-CHHH---HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCe----
Confidence 4899999999999999999999533333 3333 3444568899999999999998654332245555 3311
Q ss_pred CCccccccEEEEecCcch-HHHHHH-----HHHCCC-cEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKE-----AAAHGR-KVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEA 170 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~-----~~~~~~-~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~ 170 (312)
.++++|.||++.|... ..+... ....+. ..+.+|..++|+.|+||++||++...+ .....+..++..
T Consensus 229 --~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~----~~~~~A~~~g~~ 302 (315)
T 3r9u_A 229 --RDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP----KQVICAAGDGAV 302 (315)
T ss_dssp --EEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC----CCHHHHHHHHHH
T ss_pred --EEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch----hhhhhHHhhHHH
Confidence 3688999999999522 111111 011222 347778889999999999999654322 233444444444
Q ss_pred HHH
Q psy11185 171 IKD 173 (312)
Q Consensus 171 ~~~ 173 (312)
...
T Consensus 303 aa~ 305 (315)
T 3r9u_A 303 AAL 305 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 156
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.07 E-value=3.9e-10 Score=98.94 Aligned_cols=143 Identities=13% Similarity=0.052 Sum_probs=91.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNT 99 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (312)
.+|+|+|..|+++|.+||+++++..+. .++. +.+.+++.||++++++.++++..+.+....+.+.+...+. .
T Consensus 165 ~~g~e~a~~l~~~g~~V~~i~~~~~~~-~~~~----l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~---~ 236 (319)
T 3cty_A 165 NSGAIAAISMSEYVKNVTIIEYMPKYM-CENA----YVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGE---E 236 (319)
T ss_dssp HHHHHHHHHHTTTBSEEEEECSSSSCC-SCHH----HHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCC---E
T ss_pred HHHHHHHHHHHhhCCcEEEEEcCCccC-CCHH----HHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCc---e
Confidence 579999999999999999999953233 2333 3455667899999999999998643222356665311110 1
Q ss_pred ccccccEEEEecCcchH-HHHHHH-HHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHH
Q psy11185 100 HKYDYDLLVLGGGSGGL-AAAKEA-AAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 100 ~~~~~d~vivg~G~~gl-~~a~~~-~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~ 174 (312)
..+++|.||++.|.... .+...+ ...+ ...+.+|+.++++.|+||++||++.... ...+.+..++..+..+
T Consensus 237 ~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~ 310 (319)
T 3cty_A 237 KLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF----AQIASAVGDGCKAALS 310 (319)
T ss_dssp EEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----CCHHHHHHHHHHHHHH
T ss_pred EEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch----hhHHHHHHHHHHHHHH
Confidence 36899999999995321 111111 1112 1346778888999999999999654421 2344455555555443
No 157
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.06 E-value=4e-10 Score=98.43 Aligned_cols=143 Identities=17% Similarity=0.125 Sum_probs=91.0
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHh-ccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMA-EGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~-~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||+++++..++ .++++ .+.+. +.||++++++.+.++..+++....+.+.+...+.
T Consensus 153 ~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~~~~----~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~--- 224 (311)
T 2q0l_A 153 DTAVEEAIYLANICKKVYLIHRRDGFR-CAPIT----LEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNE--- 224 (311)
T ss_dssp HHHHHHHHHHHTTSSEEEEECSSSSCC-SCHHH----HHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCC---
T ss_pred HHHHHHHHHHHhcCCEEEEEeeCCccC-CCHHH----HHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCc---
Confidence 489999999999999999999953333 34443 34444 4799999999999997643322246665311110
Q ss_pred CccccccEEEEecCcch-HHHHHHH-----HHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEA-----AAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAI 171 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~-----~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~ 171 (312)
..++++|.||++.|... ..+...+ ...+ ...+.+|..++++.|+||++||++...+ .....+..++..+
T Consensus 225 ~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----~~~~~A~~~g~~a 300 (311)
T 2q0l_A 225 KRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP----KQVVCAASDGATA 300 (311)
T ss_dssp EEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----CCHHHHHHHHHHH
T ss_pred eEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch----HHHHHHHHhHHHH
Confidence 13679999999999522 1111111 1111 2347778888999999999999765422 2344455555554
Q ss_pred HHH
Q psy11185 172 KDA 174 (312)
Q Consensus 172 ~~~ 174 (312)
..+
T Consensus 301 a~~ 303 (311)
T 2q0l_A 301 ALS 303 (311)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 158
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.04 E-value=5e-10 Score=104.42 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=88.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
..+|++|||+|++|+.+|..+.+. .+++++|+... .|+.+..... ..+++.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~--------~GG~~~~~~~-------------------~~~g~~- 157 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGW--------LGGDMWLKGI-------------------KQEGFN- 157 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSS--------SSCSGGGTCS-------------------EETTTT-
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCC--------CCCeeecccc-------------------ccCCCC-
Confidence 357999999999999999999988 89999997542 1221111000 001100
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEe--eCCeEEEEe-cCCCeEEEEcCeEEEccCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFI--DQHSVEATM-KNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~--~~~~~~v~~-~~G~~~~i~ad~vVlAtG~~ 257 (312)
. +...+. ..+...+ ..++++...+ +..+ +...+.+.. .+++...+.||+||+|||+.
T Consensus 158 -----~--~~~~~~-----------~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 158 -----K--DSRKVV-----------EELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp -----E--EHHHHH-----------HHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred -----C--CHHHHH-----------HHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 0 111111 1111223 5577765443 2211 223344433 45544579999999999999
Q ss_pred CCCCCCCCCCcc-eeccccccC----C-CCCCCeEEEEcCchhhHH
Q psy11185 258 PNYPDIPGAKEH-CISSDDIFS----L-EKPPGKTLVVGAGYIGKL 297 (312)
Q Consensus 258 p~~p~~~g~~~~-~~~~~~~~~----~-~~~~~~v~VvG~G~sa~~ 297 (312)
|+.|+++|.+.. .++..++.. . ...+++++|||+|.+|++
T Consensus 219 ~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle 264 (493)
T 1y56_A 219 DSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI 264 (493)
T ss_dssp ECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH
T ss_pred ccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH
Confidence 999999988643 333333321 1 134578999999999997
No 159
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.03 E-value=1.2e-09 Score=96.05 Aligned_cols=142 Identities=15% Similarity=0.094 Sum_probs=90.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHH-hccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEM-AEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l-~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|++||+++++..+. .++.+ .+.+ ++.||+++++++++++..+ +....+.+.+...+.
T Consensus 162 ~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~~~~----~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~--- 232 (325)
T 2q7v_A 162 DAAVEEGMFLTKFADEVTVIHRRDTLR-ANKVA----QARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGE--- 232 (325)
T ss_dssp HHHHHHHHHHTTTCSEEEEECSSSSCC-SCHHH----HHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCC---
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCcCC-cchHH----HHHHHhcCCceEecCCceEEEccC-CcEEEEEEEECCCCc---
Confidence 489999999999999999999953232 23333 3334 4469999999999999863 222256665311110
Q ss_pred CccccccEEEEecCcch-HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHH
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~ 174 (312)
..++++|.||++.|... ..+...+...+ ...+.+|+.++++.|+||++||++...+ .....+..++..+..+
T Consensus 233 ~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~ 306 (325)
T 2q7v_A 233 VSELATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY----RQLATSVGAGTRAAMM 306 (325)
T ss_dssp EEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC----CCHHHHHHHHHHHHHH
T ss_pred EEEEEcCEEEEccCCCCChHHHhhhcccCCCccEecCCCCccCCCCEEEeecccCccH----HHHHHHHHHHHHHHHH
Confidence 13678999999999522 11111112222 2346778888999999999999654422 2344455555554443
No 160
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.03 E-value=1e-09 Score=96.68 Aligned_cols=125 Identities=13% Similarity=0.066 Sum_probs=81.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCC--CeeEEEEeecccccc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD--GKLKVQYKNVAEVRQ 96 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~--~~~~v~~~~~~~~~~ 96 (312)
.+|+|+|..|+++|.+||+++++ .++. .+.+ ..+.+++.||++++++.+.+++.+.+ ....+.+.+...+.
T Consensus 169 ~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~- 242 (333)
T 1vdc_A 169 DSAMEEANFLTKYGSKVYIIHRRDAFRA--SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGD- 242 (333)
T ss_dssp HHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCC-
T ss_pred hHHHHHHHHHHhcCCeEEEEecCCcCCc--cHHH---HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCc-
Confidence 58999999999999999999995 4432 2222 12445678999999999999986543 22246665421111
Q ss_pred CCCccccccEEEEecCcch-HHHHHHHHHCC-CcEEEEecc-CCCCCCcccccCCcccc
Q psy11185 97 DNTHKYDYDLLVLGGGSGG-LAAAKEAAAHG-RKVIVLDYV-IPSPQGTTWGLGGTCVN 152 (312)
Q Consensus 97 ~~~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~~~~ve~~-~~~~~~~v~a~Gd~~~~ 152 (312)
..++++|.||++.|... ..+.......+ ...+.+|.. ++|+.|+||++||++..
T Consensus 243 --~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~ 299 (333)
T 1vdc_A 243 --VSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDK 299 (333)
T ss_dssp --EEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCS
T ss_pred --eEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhhcccCCCCEEEeeeccCC
Confidence 14679999999999521 11111111112 233556664 58999999999996544
No 161
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.02 E-value=9.1e-10 Score=103.35 Aligned_cols=124 Identities=14% Similarity=0.110 Sum_probs=85.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhc-cceEEEeeceeeEEEEcCCCeeEEEEeeccccccC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAE-GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQD 97 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~-~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~ 97 (312)
.+|+|+|..|+++|.+||++++. +++. + ..+.+.|++ .||++++++.++++..+.+....+.+.+...+.
T Consensus 365 ~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~-- 436 (521)
T 1hyu_A 365 NSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD-- 436 (521)
T ss_dssp HHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCC--
T ss_pred HHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCc--
Confidence 58999999999999999999995 5543 3 345666777 699999999999998643332256666532111
Q ss_pred CCccccccEEEEecCcch-HHHHHHHHHCC-CcEEEEeccCCCCCCcccccCCcccc
Q psy11185 98 NTHKYDYDLLVLGGGSGG-LAAAKEAAAHG-RKVIVLDYVIPSPQGTTWGLGGTCVN 152 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~~~~ve~~~~~~~~~v~a~Gd~~~~ 152 (312)
...+++|.||++.|... ..........+ ...+.+|..++|+.|+||++||++..
T Consensus 437 -~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~ 492 (521)
T 1hyu_A 437 -IHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTV 492 (521)
T ss_dssp -EEEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBCC
T ss_pred -eEEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCCCCCCCEEEeecccCC
Confidence 13678999999999521 11111112222 23477788889999999999996544
No 162
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.01 E-value=5e-09 Score=87.77 Aligned_cols=139 Identities=13% Similarity=0.028 Sum_probs=91.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-C-----------------CCccc-------hHHHHHHHHHHHhcc-ceEEEeecee
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-V-----------------PLRGF-------DQQMAKLICEEMAEG-GVHFLHKCLP 73 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~-----------------~l~~~-------~~~~~~~~~~~l~~~-gi~~~~~~~v 73 (312)
..|+++|..|+++|.+|+|+|+. . +++.+ ...+.+++.+.+++. ||+++ ++++
T Consensus 13 ~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~gv~i~-~~~v 91 (232)
T 2cul_A 13 FSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRPLHLF-QATA 91 (232)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTTEEEE-ECCE
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCCcEEE-EeEE
Confidence 47999999999999999999984 1 12222 136778888888886 99998 6789
Q ss_pred eEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc-----------------ch----HHHHHHHHHCCCcEEEE
Q psy11185 74 LSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS-----------------GG----LAAAKEAAAHGRKVIVL 132 (312)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~-----------------~g----l~~a~~~~~~~~~~~~v 132 (312)
+++..+++....+.+.++ ..+++|.||++.|. .| ..++..+.+.+..+--.
T Consensus 92 ~~i~~~~~~v~~v~~~~g--------~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~ 163 (232)
T 2cul_A 92 TGLLLEGNRVVGVRTWEG--------PPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVER 163 (232)
T ss_dssp EEEEEETTEEEEEEETTS--------CCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEEEE
T ss_pred EEEEEeCCEEEEEEECCC--------CEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEEcc
Confidence 988764332124555443 46899999999996 11 24566666665532111
Q ss_pred --------------------ec-------cCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 133 --------------------DY-------VIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 133 --------------------e~-------~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
+. ...|+.|++|++||++ ..+ ....+..+++.+..
T Consensus 164 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g-----~~~~~~~~g~~~a~ 225 (232)
T 2cul_A 164 EGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG-----DYARMSEEGKRLAE 225 (232)
T ss_dssp EEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC-----CHHHHHHHHHHHHH
T ss_pred ccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc-----cHHHHHHHHHHHHH
Confidence 10 1126899999999977 544 22334445554444
No 163
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.00 E-value=1.1e-09 Score=100.64 Aligned_cols=144 Identities=13% Similarity=0.100 Sum_probs=92.9
Q ss_pred hhhh----HhhhccCCe-----EEEEEcc-CC----CccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEE
Q psy11185 23 LECA----GFLNGLGFN-----ATVMIRS-VP----LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQY 88 (312)
Q Consensus 23 ~E~A----~~l~~~g~~-----vtl~~~~-~~----l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~ 88 (312)
+|+| ..++++|.+ ||++++. .+ |+.+. ++.+.+.+.|++.||++++++.+++++. + .+.+
T Consensus 168 ~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~---~v~~ 241 (437)
T 3sx6_A 168 YEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVG-DSKGILTKGLKEEGIEAYTNCKVTKVED--N---KMYV 241 (437)
T ss_dssp HHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCT-THHHHHHHHHHHTTCEEECSEEEEEEET--T---EEEE
T ss_pred HHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcch-HHHHHHHHHHHHCCCEEEcCCEEEEEEC--C---eEEE
Confidence 6666 777788875 9999984 55 34333 4788899999999999999999999863 2 2333
Q ss_pred ee----ccccccCCCccccccEEEEecCcchHHHHHH--HHHCCCcEEEEeccCCC-CCCcccccCCccccccc------
Q psy11185 89 KN----VAEVRQDNTHKYDYDLLVLGGGSGGLAAAKE--AAAHGRKVIVLDYVIPS-PQGTTWGLGGTCVNVGC------ 155 (312)
Q Consensus 89 ~~----~~~~~~~~~~~~~~d~vivg~G~~gl~~a~~--~~~~~~~~~~ve~~~~~-~~~~v~a~Gd~~~~~~~------ 155 (312)
.+ +... ...++++|.++++.|..+...... ........+.+|..+++ +.|+||++||++...+.
T Consensus 242 ~~~~~~g~~~---~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~ 318 (437)
T 3sx6_A 242 TQVDEKGETI---KEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVP 318 (437)
T ss_dssp EEECTTSCEE---EEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSC
T ss_pred EecccCCccc---cceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCC
Confidence 32 1100 015689999999988543321111 01112234677777887 89999999997654321
Q ss_pred -chhhHHHHHHHHHHHHHHHH
Q psy11185 156 -IPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 156 -~~~~~~~~a~~~~~~~~~~~ 175 (312)
..++..+.+..++..+..+.
T Consensus 319 ~~~pk~~~~A~~qg~~aA~ni 339 (437)
T 3sx6_A 319 TGAPKTGYMIESMVSAAVHNI 339 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHH
Confidence 11245556666666666554
No 164
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.97 E-value=5e-10 Score=96.89 Aligned_cols=129 Identities=13% Similarity=0.020 Sum_probs=87.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNT 99 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (312)
.+|+|+|..|+++| +||+++++.. .++ +.+.+.|++.||+++. +.+.+++. ++ .+.+.++
T Consensus 151 ~~~~e~a~~l~~~g-~v~~v~~~~~--~~~----~~~~~~l~~~gv~i~~-~~v~~i~~--~~--~v~~~~g-------- 210 (297)
T 3fbs_A 151 PMAIHHALMLPDWG-ETTFFTNGIV--EPD----ADQHALLAARGVRVET-TRIREIAG--HA--DVVLADG-------- 210 (297)
T ss_dssp TTHHHHHHHGGGTS-EEEEECTTTC--CCC----HHHHHHHHHTTCEEEC-SCEEEEET--TE--EEEETTS--------
T ss_pred ccHHHHHHHhhhcC-cEEEEECCCC--CCC----HHHHHHHHHCCcEEEc-ceeeeeec--CC--eEEeCCC--------
Confidence 58899999999999 9999998432 223 3346778889999985 88888863 22 5667665
Q ss_pred ccccccEEEEecCcc-hHHHHHHH-HHCC---Cc-EEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 100 HKYDYDLLVLGGGSG-GLAAAKEA-AAHG---RK-VIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 100 ~~~~~d~vivg~G~~-gl~~a~~~-~~~~---~~-~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
.++++|.||++.|.. ...+...+ ...+ .. .+.+|..++|+.|+||++||++... ...+.+..++.....
T Consensus 211 ~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~-----~~~~~A~~~g~~aa~ 285 (297)
T 3fbs_A 211 RSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPA-----GSVALAVGDGAMAGA 285 (297)
T ss_dssp CEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTT-----CCHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCch-----HHHHHHHHhHHHHHH
Confidence 568999999999953 11222222 1111 12 5788888999999999999965432 233444444444443
No 165
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.96 E-value=1.4e-09 Score=99.54 Aligned_cols=143 Identities=16% Similarity=0.192 Sum_probs=92.5
Q ss_pred hhhh----HhhhccC----CeEEEEEcc-CC----CccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe
Q psy11185 23 LECA----GFLNGLG----FNATVMIRS-VP----LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK 89 (312)
Q Consensus 23 ~E~A----~~l~~~g----~~vtl~~~~-~~----l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~ 89 (312)
+|+| ..+.++| .+||++++. .+ +..+ +++.+.+.+.|++.||++++++.+++++. + .+.+.
T Consensus 161 ~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~---~v~~~ 234 (430)
T 3h28_A 161 YEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEP--D---KVIYE 234 (430)
T ss_dssp HHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECS--S---EEEEE
T ss_pred HHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeC--C---eEEEE
Confidence 6666 6666777 589999984 54 3333 35788889999999999999999999853 2 35554
Q ss_pred eccccccCCCccccccEEEEecCcchHHHHHHH---HHCCCc-EEEEeccCCC-CCCcccccCCccccccc-------ch
Q psy11185 90 NVAEVRQDNTHKYDYDLLVLGGGSGGLAAAKEA---AAHGRK-VIVLDYVIPS-PQGTTWGLGGTCVNVGC-------IP 157 (312)
Q Consensus 90 ~~~~~~~~~~~~~~~d~vivg~G~~gl~~a~~~---~~~~~~-~~~ve~~~~~-~~~~v~a~Gd~~~~~~~-------~~ 157 (312)
+... ...++++|.+|++.|..+......+ ...... .+.+|+.+++ +.|+||++||++...+. ..
T Consensus 235 ~~~~----~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~ 310 (430)
T 3h28_A 235 DLNG----NTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGV 310 (430)
T ss_dssp CTTS----CEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCC
T ss_pred ecCC----CceEEeeeEEEECCCCccchhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCC
Confidence 4110 0157899999999996443221111 111223 4677777777 89999999997654321 11
Q ss_pred hhHHHHHHHHHHHHHHHH
Q psy11185 158 KKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 158 ~~~~~~a~~~~~~~~~~~ 175 (312)
++..+.+..++..+..+.
T Consensus 311 pk~~~~A~~~g~~aa~ni 328 (430)
T 3h28_A 311 PKTGMMIEQMAMAVAHNI 328 (430)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHH
Confidence 234555666666655543
No 166
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.96 E-value=1.5e-09 Score=95.89 Aligned_cols=124 Identities=13% Similarity=0.109 Sum_probs=80.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDN 98 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (312)
.+|+|+|..|+++|.+||+++|+ +++.. +.+ ..+.+++.||++++++.+++++.+. +...+.+.+...+ .
T Consensus 165 ~~g~e~a~~l~~~g~~V~l~~~~~~~~~~--~~~---~~~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g---~ 235 (335)
T 2a87_A 165 DSAMEEATFLTRFARSVTLVHRRDEFRAS--KIM---LDRARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDTNTG---A 235 (335)
T ss_dssp HHHHHHHHHHTTTCSEEEEECSSSSCSSC--TTH---HHHHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEETTS---C
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCcCCcc--HHH---HHHHhccCCcEEEeCceeEEEecCC-cEeEEEEEEcCCC---c
Confidence 48999999999999999999995 55322 111 1234567899999999999997543 2224666532111 0
Q ss_pred CccccccEEEEecCcch-HHHHHHHHHCC-CcEEEEec-cCCCCCCcccccCCcccc
Q psy11185 99 THKYDYDLLVLGGGSGG-LAAAKEAAAHG-RKVIVLDY-VIPSPQGTTWGLGGTCVN 152 (312)
Q Consensus 99 ~~~~~~d~vivg~G~~g-l~~a~~~~~~~-~~~~~ve~-~~~~~~~~v~a~Gd~~~~ 152 (312)
...+++|.||++.|... ..+.......+ ...+.+|. .++++.|+||++||++..
T Consensus 236 ~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~ 292 (335)
T 2a87_A 236 ETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDR 292 (335)
T ss_dssp CEEECCSCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCC
T ss_pred eEEeecCEEEEccCCccChhHhhcccccCCCccEEeCCCCCccCCCCEEEeeecCCc
Confidence 14689999999999521 11111111122 23455665 468999999999996543
No 167
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.96 E-value=1.6e-09 Score=99.32 Aligned_cols=133 Identities=15% Similarity=0.169 Sum_probs=89.2
Q ss_pred CeEEEEEccCCC----ccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEE
Q psy11185 34 FNATVMIRSVPL----RGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVL 109 (312)
Q Consensus 34 ~~vtl~~~~~~l----~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~viv 109 (312)
.+|++++....| +..++..++++++.|+++||++++++.+++++. + .+.+.+..+ ...++++|.+||
T Consensus 180 v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~---~--~~~~~~~~g----~~~~i~~d~vi~ 250 (430)
T 3hyw_A 180 VPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP---D--KVIYEDLNG----NTHEVPAKFTMF 250 (430)
T ss_dssp CCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS---S--EEEEECTTS----CEEEEECSEEEE
T ss_pred ceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC---C--ceEEEeeCC----CceEeecceEEE
Confidence 478999874333 345677888999999999999999999999853 2 344443221 115789999999
Q ss_pred ecCcchHHHHHHH---HHC-CCcEEEEeccCC-CCCCcccccCCcccccc-------cchhhHHHHHHHHHHHHHHHH
Q psy11185 110 GGGSGGLAAAKEA---AAH-GRKVIVLDYVIP-SPQGTTWGLGGTCVNVG-------CIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 110 g~G~~gl~~a~~~---~~~-~~~~~~ve~~~~-~~~~~v~a~Gd~~~~~~-------~~~~~~~~~a~~~~~~~~~~~ 175 (312)
+.|..+....... ... ....+++|+.++ ++.|+|||+|||+...+ ...++..+.+..++..+.+|.
T Consensus 251 ~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni 328 (430)
T 3hyw_A 251 MPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNI 328 (430)
T ss_dssp ECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred eccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHH
Confidence 9996543332221 111 223577787776 89999999999765432 112345666777777777664
No 168
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.95 E-value=7.9e-11 Score=107.98 Aligned_cols=149 Identities=19% Similarity=0.255 Sum_probs=88.0
Q ss_pred ccEEEEecCcchHHHHHHHHH--CCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAA--HGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~--~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
.|+||||+|++|+.+|..+.+ .+.+++++|+.... + ..+ .... ...+...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~--------~----~~~----~~~~------------~~~g~~~ 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF--------G----FTP----AFPH------------LAMGWRK 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE--------E----CGG----GHHH------------HHHTCSC
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC--------C----cCC----Ccch------------hccCccC
Confidence 589999999999999999998 67889999975321 0 000 0000 0011000
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
.. ....+ +...+...+++++.+.+..++.....+.+.+| .++.||+||+|||+.|..|
T Consensus 55 ~~--~~~~~------------------~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g--~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 FE--DISVP------------------LAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp GG--GSEEE------------------STTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEECC
T ss_pred HH--HHHHH------------------HHHHHHhcCCEEEEEEEEEEECCCCEEEECCC--cEEECCEEEEcCCcccccC
Confidence 00 00000 11234567899988777777765556777777 5799999999999988766
Q ss_pred CCCC--CCcceeccccccCCCC------CCCeEEEEcCchhh------HHHHHHh
Q psy11185 262 DIPG--AKEHCISSDDIFSLEK------PPGKTLVVGAGYIG------KLETWDS 302 (312)
Q Consensus 262 ~~~g--~~~~~~~~~~~~~~~~------~~~~v~VvG~G~sa------~~~a~~l 302 (312)
.+.. ......+..+...... .+++++|||+|++| +|.+..+
T Consensus 113 g~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~l 167 (430)
T 3h28_A 113 AEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALML 167 (430)
T ss_dssp SBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHH
T ss_pred CCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHH
Confidence 3321 1011222333322211 14567899998775 6766443
No 169
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.90 E-value=5e-09 Score=105.74 Aligned_cols=127 Identities=18% Similarity=0.222 Sum_probs=86.1
Q ss_pred hhhhhhhHhhhccCC-eEEEEEc-c-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeec---c
Q psy11185 20 DSGLECAGFLNGLGF-NATVMIR-S-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNV---A 92 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~-~vtl~~~-~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~---~ 92 (312)
++|+|+|..+.++|. +||+++| + .+++.+++++ +.++++||++++++.+.++... ++.+ .+.+.+. +
T Consensus 342 ~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~ 415 (1025)
T 1gte_A 342 DTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDE 415 (1025)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECT
T ss_pred hHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcC
Confidence 589999999999996 8999999 4 5778888774 4567889999999999998753 3333 3444310 0
Q ss_pred ccc----cCCCccccccEEEEecCcch--HHHHHHH--HHCCC-cEEEEec-cCCCCCCcccccCCcccc
Q psy11185 93 EVR----QDNTHKYDYDLLVLGGGSGG--LAAAKEA--AAHGR-KVIVLDY-VIPSPQGTTWGLGGTCVN 152 (312)
Q Consensus 93 ~~~----~~~~~~~~~d~vivg~G~~g--l~~a~~~--~~~~~-~~~~ve~-~~~~~~~~v~a~Gd~~~~ 152 (312)
.++ .+...++++|.||++.|... ..+...+ .+.+. ..+.+|. .++|+.|+|||+||+...
T Consensus 416 ~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~ 485 (1025)
T 1gte_A 416 TGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGM 485 (1025)
T ss_dssp TSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCS
T ss_pred CCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCC
Confidence 000 00013689999999999632 3333222 12222 2366665 788999999999996543
No 170
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.89 E-value=2e-09 Score=93.81 Aligned_cols=116 Identities=9% Similarity=0.056 Sum_probs=77.1
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCC
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNT 99 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (312)
.+++|+|..++++|.+||+++++..+. +.+.+.|++.|++++.++ +..+..++.....+.+.++
T Consensus 157 ~~~~e~a~~~~~~~~~v~i~~~~~~~~-------~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g-------- 220 (304)
T 4fk1_A 157 DHTLHMTKLVYNWSTDLVIATNGNELS-------QTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSG-------- 220 (304)
T ss_dssp HHHHHHHHHHTTTCSCEEEECSSCCCC-------HHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTS--------
T ss_pred chhhhHHHHHHhCCceEEEEeccccch-------hhhhhhhhccceeEeeee-EEEeecCCCeeeeeecccc--------
Confidence 467999999999999999999853332 223567888999998765 6666543322235666655
Q ss_pred ccccccEEEEecC-cchHH-HHHHHHHCCCc-EEEEeccCCCCCCcccccCCccc
Q psy11185 100 HKYDYDLLVLGGG-SGGLA-AAKEAAAHGRK-VIVLDYVIPSPQGTTWGLGGTCV 151 (312)
Q Consensus 100 ~~~~~d~vivg~G-~~gl~-~a~~~~~~~~~-~~~ve~~~~~~~~~v~a~Gd~~~ 151 (312)
..+++|.+|+.+| ..... +.....+.+.+ .+.+|++++|+.|+|||+||++.
T Consensus 221 ~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~ 275 (304)
T 4fk1_A 221 LRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTT 275 (304)
T ss_dssp CEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHH
T ss_pred ceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCC
Confidence 4667777776665 22212 22111222322 37789999999999999999654
No 171
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.88 E-value=1.2e-09 Score=100.64 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=88.7
Q ss_pred hhhhhhhHhhhccCC-eEEEEEcc-CC-CccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEee-----
Q psy11185 20 DSGLECAGFLNGLGF-NATVMIRS-VP-LRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKN----- 90 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~-~vtl~~~~-~~-l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~----- 90 (312)
++|+|+|..+.++|. +||+++|+ ++ ++..+.+ .+.++++||++++++.+.++..+ +.+ .+.+..
T Consensus 274 ~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~--g~v~~v~~~~~~~~~ 346 (456)
T 2vdc_G 274 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTGD--TVVTGVRAVRIHLGV 346 (456)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEEE--EEEETTEEEEEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeCC--CcEEEEEEEEEEecc
Confidence 579999999999998 59999994 54 7777655 35577889999999999998742 221 112210
Q ss_pred -ccccc------cCCCccccccEEEEecCcch--HH-HHHHH-HHCCC-cEEEEecc-CCCCCCcccccCCcccccccch
Q psy11185 91 -VAEVR------QDNTHKYDYDLLVLGGGSGG--LA-AAKEA-AAHGR-KVIVLDYV-IPSPQGTTWGLGGTCVNVGCIP 157 (312)
Q Consensus 91 -~~~~~------~~~~~~~~~d~vivg~G~~g--l~-~a~~~-~~~~~-~~~~ve~~-~~~~~~~v~a~Gd~~~~~~~~~ 157 (312)
...++ .+...++++|.||++.|... .. +...+ .+.+. ..+.+|.. ++|+.++|||+||+....
T Consensus 347 ~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~---- 422 (456)
T 2vdc_G 347 ADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGA---- 422 (456)
T ss_dssp EEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSC----
T ss_pred cCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCc----
Confidence 00000 01114689999999999633 11 11111 11122 23666665 789999999999965432
Q ss_pred hhHHHHHHHHHHHHHH
Q psy11185 158 KKLMHQAALLGEAIKD 173 (312)
Q Consensus 158 ~~~~~~a~~~~~~~~~ 173 (312)
.....+..+++....
T Consensus 423 -~~v~~A~~~G~~aA~ 437 (456)
T 2vdc_G 423 -SLVVWAIRDGRDAAE 437 (456)
T ss_dssp -CSHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHH
Confidence 233445555554444
No 172
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.87 E-value=2.6e-08 Score=94.59 Aligned_cols=174 Identities=18% Similarity=0.204 Sum_probs=90.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchh-hHHHHHHHH---HHHHHHHHHcC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPK-KLMHQAALL---GEAIKDAVAYG 178 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~-~~~~~a~~~---~~~~~~~~~~~ 178 (312)
++|+||||+|++|+.+|..+.+.|.+++++|..... ++...|....+.... ......... ...+.+.....
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~-----iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~ 102 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDT-----LGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQ 102 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG-----TTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccc-----cccccccccccchhhHHHHHHHHHhccHHHHHhhhcccc
Confidence 689999999999999999999999999999975311 000111000000000 000000000 00011111010
Q ss_pred CccC--Cccc------cccCHHHHHHHHHHHHHHhhHHHHHHHhc-CCceEEeceeEEe--eCCe-EEEEecCCCeEEEE
Q psy11185 179 WEIP--NVKS------VQHNWANLREAVQNHVKSVNWVTRVMLRD-KKVDYLNALGKFI--DQHS-VEATMKNGEKKTLT 246 (312)
Q Consensus 179 ~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~~~~~~~~~~--~~~~-~~v~~~~G~~~~i~ 246 (312)
+... ...+ ...|...+ ...+...+.. .+++++...+..+ +... +.+.+.+| .++.
T Consensus 103 f~~l~~~kgpav~~~r~~~Dr~~~-----------~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG--~~I~ 169 (651)
T 3ces_A 103 FRILNASKGPAVRATRAQADRVLY-----------RQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMG--LKFR 169 (651)
T ss_dssp EEEESTTSCGGGCEEEEEECHHHH-----------HHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTS--EEEE
T ss_pred hhhhhcccCcccccchhhCCHHHH-----------HHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCC--CEEE
Confidence 0000 0000 01222222 2223344555 6899877666555 3333 45777788 6899
Q ss_pred cCeEEEccCCCCCCCCCCCCCcceeccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeee
Q psy11185 247 AENILIATGGRPNYPDIPGAKEHCISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVT 310 (312)
Q Consensus 247 ad~vVlAtG~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~ 310 (312)
||.||+|||+++..+.++|...+. +++ +| |.+|.+.+..|...+..|+
T Consensus 170 Ad~VVLATGt~s~~~~i~G~~~~~------------~gr---iG-g~~a~eLA~~L~~lG~~v~ 217 (651)
T 3ces_A 170 AKAVVLTVGTFLDGKIHIGLDNYS------------GGR---AG-DPPSIPLSRRLRELPLRVG 217 (651)
T ss_dssp EEEEEECCSTTTCCEEECC-----------------------------CCHHHHHHHTTTCCEE
T ss_pred CCEEEEcCCCCccCccccCcccCC------------CCC---cc-chhhhHHHHHHHhcCCeEE
Confidence 999999999999888888875321 333 56 7788888887777666654
No 173
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.83 E-value=1.1e-08 Score=99.19 Aligned_cols=131 Identities=15% Similarity=0.143 Sum_probs=91.6
Q ss_pred hhhhhhHhhhccCCeEEEEEc-cCCCccch-HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe-eccccccC
Q psy11185 21 SGLECAGFLNGLGFNATVMIR-SVPLRGFD-QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK-NVAEVRQD 97 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~-~~~l~~~~-~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~-~~~~~~~~ 97 (312)
+|+|+|..|+++|++||++++ +.+++.++ +.+...+.+.|++.||++++++.+++++.+ + +.+... .++
T Consensus 536 ~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~-~~v~~~~~~~----- 607 (690)
T 3k30_A 536 LGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG--G-VTVRDTYASI----- 607 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT--E-EEEEETTTCC-----
T ss_pred cHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECC--e-EEEEEccCCe-----
Confidence 579999999999999999999 47776543 666788889999999999999999998632 2 233322 111
Q ss_pred CCccccccEEEEecCcc-hHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHH
Q psy11185 98 NTHKYDYDLLVLGGGSG-GLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAV 175 (312)
Q Consensus 98 ~~~~~~~d~vivg~G~~-gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~ 175 (312)
..++++|.||+++|.. ...+...+...+. +++.++||++||++.. . ....+..++..+..+.
T Consensus 608 -~~~i~aD~VV~A~G~~p~~~l~~~l~~~~~---------~t~~~~VyaiGD~~~~-~-----~~~~A~~~g~~aa~~i 670 (690)
T 3k30_A 608 -ERELECDAVVMVTARLPREELYLDLVARRD---------AGEIASVRGIGDAWAP-G-----TIAAAVWSGRRAAEEF 670 (690)
T ss_dssp -EEEEECSEEEEESCEEECCHHHHHHHHHHH---------HTSCSEEEECGGGTSC-B-----CHHHHHHHHHHHHHHT
T ss_pred -EEEEECCEEEECCCCCCChHHHHHHhhhhc---------ccCCCCEEEEeCCCch-h-----hHHHHHHHHHHHHHHH
Confidence 1468999999999952 2222222222111 6889999999996542 2 2233677777777665
No 174
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.83 E-value=8.7e-09 Score=100.46 Aligned_cols=140 Identities=14% Similarity=0.092 Sum_probs=91.0
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCcc--chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEe--ecccc-
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRG--FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYK--NVAEV- 94 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~--~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~- 94 (312)
.+|+|+|..|+++|++|||+++..+++. ++.. ...+.+.|+++||++++++.+++++. ++ +.+... ++...
T Consensus 540 ~~g~e~A~~l~~~G~~Vtlv~~~~l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~-v~~~~~~~~~~~~~ 615 (729)
T 1o94_A 540 FMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP--GR-MEIYNIWGDGSKRT 615 (729)
T ss_dssp SHHHHHHHHHHHTTCEEEEEESSCTTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET--TE-EEEEETTCSCSCCC
T ss_pred chHHHHHHHHHHcCCEEEEEeccccccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--Ce-EEEEEecCCceEEe
Confidence 4689999999999999999999545542 3333 46778888999999999999999863 22 333321 11100
Q ss_pred --------c--cCCCccccccEEEEecCcc-hHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHH
Q psy11185 95 --------R--QDNTHKYDYDLLVLGGGSG-GLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQ 163 (312)
Q Consensus 95 --------~--~~~~~~~~~d~vivg~G~~-gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~ 163 (312)
+ .....++++|.||++.|.. ...+...+... ++..++|+.++||++||++. . .....
T Consensus 616 ~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~~------vd~~~~t~~~~VyAiGD~~~-~-----~~~~~ 683 (729)
T 1o94_A 616 YRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKAR------ESEWAENDIKGIYLIGDAEA-P-----RLIAD 683 (729)
T ss_dssp CCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHHT------GGGTGGGTCCEEEECGGGTS-C-----CCHHH
T ss_pred cccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhhh------cccccccCCCCeEEEeCccc-h-----hhHHH
Confidence 0 0001238999999999952 22233233221 46677889999999999653 2 12334
Q ss_pred HHHHHHHHHHHH
Q psy11185 164 AALLGEAIKDAV 175 (312)
Q Consensus 164 a~~~~~~~~~~~ 175 (312)
+..++..+..+.
T Consensus 684 A~~~G~~aA~~i 695 (729)
T 1o94_A 684 ATFTGHRVAREI 695 (729)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 666677666654
No 175
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.82 E-value=5.9e-09 Score=96.27 Aligned_cols=149 Identities=13% Similarity=0.018 Sum_probs=90.7
Q ss_pred hhhhhhhHhhhcc--CCeEEEEEcc-CCCcc--------------------chHHHHHHHHHHHhc--------------
Q psy11185 20 DSGLECAGFLNGL--GFNATVMIRS-VPLRG--------------------FDQQMAKLICEEMAE-------------- 62 (312)
Q Consensus 20 ~ig~E~A~~l~~~--g~~vtl~~~~-~~l~~--------------------~~~~~~~~~~~~l~~-------------- 62 (312)
.+|+|+|..|++. |.+||+++|+ .+++. ++++.+..+.+.+..
T Consensus 237 ~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (463)
T 3s5w_A 237 QSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERI 316 (463)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHH
T ss_pred HhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHH
Confidence 5899999999999 9999999994 66442 233334444444333
Q ss_pred ------------cceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchH---HHHHHHHHCCC
Q psy11185 63 ------------GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGL---AAAKEAAAHGR 127 (312)
Q Consensus 63 ------------~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl---~~a~~~~~~~~ 127 (312)
.||++++++.|++++..+ +.+.+.+.+...+.. .++++|.||+++|...- .....+... .
T Consensus 317 ~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~-~~~~v~~~~~~~g~~---~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~-~ 391 (463)
T 3s5w_A 317 YGVFYRQKVSGIPRHAFRCMTTVERATATA-QGIELALRDAGSGEL---SVETYDAVILATGYERQLHRQLLEPLAEY-L 391 (463)
T ss_dssp HHHHHHHHHHCCCCSEEETTEEEEEEEEET-TEEEEEEEETTTCCE---EEEEESEEEECCCEECCC-CTTTGGGGGG-B
T ss_pred HHHHHHHHhcCCCCeEEEeCCEEEEEEecC-CEEEEEEEEcCCCCe---EEEECCEEEEeeCCCCCCccchhHHHHHH-h
Confidence 599999999999998644 446677764322111 35899999999995221 111111111 0
Q ss_pred cEEEEeccCCCC-----CCcccccCCcccccccchhhHHHHHHHHHHHHHH
Q psy11185 128 KVIVLDYVIPSP-----QGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKD 173 (312)
Q Consensus 128 ~~~~ve~~~~~~-----~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~ 173 (312)
..+.++...++. .++||++|||....+...+.+...+..+...+..
T Consensus 392 g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~ 442 (463)
T 3s5w_A 392 GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGS 442 (463)
T ss_dssp C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHH
T ss_pred CCcccCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHH
Confidence 345666655543 4679999996544443333444455555555444
No 176
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.72 E-value=6.2e-08 Score=97.16 Aligned_cols=117 Identities=17% Similarity=0.168 Sum_probs=80.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCccchHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEee--cc--c
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRGFDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKN--VA--E 93 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~--~~--~ 93 (312)
.+|+|+|..|+++|.+|||++++ ++++. .+.+++.||++++++.+.+++.++++.+ .+.+.+ .. .
T Consensus 294 ~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~---------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~ 364 (965)
T 2gag_A 294 DSAYELVRELAATGGVVAVIDARSSISAA---------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEAREL 364 (965)
T ss_dssp TTHHHHHHHHGGGTCCSEEEESCSSCCHH---------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCE
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCccchh---------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCC
Confidence 48999999999999999999994 65432 4567889999999999999986312322 566654 10 0
Q ss_pred cccCCCccccccEEEEecCcc-hHHHHHHHHHCCCcEEEEeccCC-----CCCCcccccCCcccc
Q psy11185 94 VRQDNTHKYDYDLLVLGGGSG-GLAAAKEAAAHGRKVIVLDYVIP-----SPQGTTWGLGGTCVN 152 (312)
Q Consensus 94 ~~~~~~~~~~~d~vivg~G~~-gl~~a~~~~~~~~~~~~ve~~~~-----~~~~~v~a~Gd~~~~ 152 (312)
+. ..++++|.||+++|.. ...++. ..+.. +.+|..++ ++.|+||++||++..
T Consensus 365 G~---~~~i~~D~Vv~a~G~~P~~~l~~---~~~g~-i~vd~~~~~~v~~ts~p~IyAaGD~a~~ 422 (965)
T 2gag_A 365 GG---TQRFEADVLAVAGGFNPVVHLHS---QRQGK-LDWDTTIHAFVPADAVANQHLAGAMTGR 422 (965)
T ss_dssp EE---EEEEECSEEEEECCEEECCHHHH---HTTCC-EEEETTTTEEEECSCCTTEEECGGGGTC
T ss_pred Cc---eEEEEcCEEEECCCcCcChHHHH---hCCCc-EEEcCcccccccCCCCCCEEEEEecCCc
Confidence 10 1468999999999952 223222 22333 44555544 899999999996543
No 177
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.70 E-value=4.6e-10 Score=102.89 Aligned_cols=114 Identities=23% Similarity=0.371 Sum_probs=73.6
Q ss_pred cEEEEecCcchHHHHHHHHHCC--CcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHG--RKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIP 182 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~--~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (312)
.+||||+|++|+.+|..|.+.+ .+++++|+.... .| .+ .+.. ...+....
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~----~~--------~p----~l~~------------v~~g~~~~ 55 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF----GF--------TP----AFPH------------LAMGWRKF 55 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE----EC--------GG----GHHH------------HHHTCSCG
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC----cc--------Cc----cHHH------------HhcCCCCH
Confidence 5899999999999999998754 578999864210 00 00 0000 00111000
Q ss_pred CccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCC
Q psy11185 183 NVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPD 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~ 262 (312)
. ....+ +...+.+.+|+++.+.+..++...-++++++| +++.||+||+|||+.+. ++
T Consensus 56 ~--~i~~~------------------~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g--~~i~YD~LViAtG~~~~-~~ 112 (430)
T 3hyw_A 56 E--DISVP------------------LAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLV-FG 112 (430)
T ss_dssp G--GSEEE------------------STTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEE-CC
T ss_pred H--Hhhhc------------------HHHHHHHCCcEEEEeEEEEEECCCCEEEECCC--CEEECCEEEEeCCCCcc-CC
Confidence 0 11111 11224567999999998888877777888888 78999999999998764 45
Q ss_pred CCCCCcc
Q psy11185 263 IPGAKEH 269 (312)
Q Consensus 263 ~~g~~~~ 269 (312)
+||..++
T Consensus 113 i~G~~e~ 119 (430)
T 3hyw_A 113 AEGQEEN 119 (430)
T ss_dssp SBTHHHH
T ss_pred ccCcccC
Confidence 8887543
No 178
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.69 E-value=1.7e-08 Score=91.37 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=46.0
Q ss_pred hcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCCCCCCCCCCCcc
Q psy11185 214 RDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRPNYPDIPGAKEH 269 (312)
Q Consensus 214 ~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p~~~g~~~~ 269 (312)
...+|+++.+.+..++.....+.+.+| .++.||+||+|||+.+..|+++|....
T Consensus 66 ~~~gv~~i~~~v~~id~~~~~v~~~~g--~~i~yd~LviAtG~~~~~~~i~G~~e~ 119 (401)
T 3vrd_B 66 RAHGIQVVHDSALGIDPDKKLVKTAGG--AEFAYDRCVVAPGIDLLYDKIEGYSEA 119 (401)
T ss_dssp HHTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECGGGSBTCCSG
T ss_pred HHCCCEEEEeEEEEEEccCcEEEeccc--ceeecceeeeccCCccccCCccCchhh
Confidence 456899999988888877777788888 789999999999999999999998653
No 179
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.63 E-value=5e-08 Score=89.99 Aligned_cols=89 Identities=9% Similarity=-0.014 Sum_probs=53.4
Q ss_pred cceEEEeeceeeEEEEcCCC-ee-EEEEeecc-------ccc--cCCCccccccEEEEecCcchHHHHHHHHHCC-CcEE
Q psy11185 63 GGVHFLHKCLPLSVTKLADG-KL-KVQYKNVA-------EVR--QDNTHKYDYDLLVLGGGSGGLAAAKEAAAHG-RKVI 130 (312)
Q Consensus 63 ~gi~~~~~~~v~~~~~~~~~-~~-~v~~~~~~-------~~~--~~~~~~~~~d~vivg~G~~gl~~a~~~~~~~-~~~~ 130 (312)
+||++++++.+.++..++++ .+ .+.+.... ... .....++++|.||++.|..+..++ .+...+ ...+
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l~-gl~~~d~~g~i 348 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPID-PSVPFDPKLGV 348 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCCC-TTSCCBTTTTB
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCCC-CCcccccCCCe
Confidence 89999999999999764323 22 34443100 000 000146899999999995332221 110112 1346
Q ss_pred EEeccCCCC-CCcccccCCcccc
Q psy11185 131 VLDYVIPSP-QGTTWGLGGTCVN 152 (312)
Q Consensus 131 ~ve~~~~~~-~~~v~a~Gd~~~~ 152 (312)
++|...+++ .|+||++||+...
T Consensus 349 ~vn~~~rt~~~p~vya~Gd~~~g 371 (460)
T 1cjc_A 349 VPNMEGRVVDVPGLYCSGWVKRG 371 (460)
T ss_dssp CCEETTEETTCTTEEECTHHHHC
T ss_pred eECCCCcCcCCCCEEEEEeCCcC
Confidence 667777888 6999999996643
No 180
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.63 E-value=1.2e-07 Score=89.88 Aligned_cols=46 Identities=30% Similarity=0.479 Sum_probs=37.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGG 148 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd 148 (312)
++|+||||+|++|+.+|..+.+.|.+|+++|+.........++.|.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg 171 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGG 171 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCce
Confidence 6899999999999999999999999999999876544333344443
No 181
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.63 E-value=3.1e-07 Score=86.91 Aligned_cols=149 Identities=19% Similarity=0.219 Sum_probs=80.4
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccch-hhHHHHHHHHH---HHHHHHHHc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIP-KKLMHQAALLG---EAIKDAVAY 177 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~-~~~~~~a~~~~---~~~~~~~~~ 177 (312)
.++|+||||+|++|+.+|..+.+.|.+++++|..... . +...|....+... ..........+ ..+.+....
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~-i----G~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADT-I----GQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGI 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG-T----TCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccc-c----CCcCccccccccchHHHHHHHHHhhhHHHHHhhhccc
Confidence 3689999999999999999999999999999975311 0 0011100000000 01110000000 011111101
Q ss_pred CCccCC--ccc------cccCHHHHHHHHHHHHHHhhHHHHHHHhc-CCceEEeceeEEe--eCCe-EEEEecCCCeEEE
Q psy11185 178 GWEIPN--VKS------VQHNWANLREAVQNHVKSVNWVTRVMLRD-KKVDYLNALGKFI--DQHS-VEATMKNGEKKTL 245 (312)
Q Consensus 178 ~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~~~~~~~~~~--~~~~-~~v~~~~G~~~~i 245 (312)
.+.... ..+ ...|...+. ..+...+.. .+++++...+..+ +... +.+.+.+| ..+
T Consensus 101 ~f~~l~~~kGpav~~~r~~~Dr~~~~-----------~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG--~~i 167 (637)
T 2zxi_A 101 QFKMLNTRKGKAVQSPRAQADKKRYR-----------EYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLG--VEY 167 (637)
T ss_dssp EEEEESTTSCGGGCEEEEEECHHHHH-----------HHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTS--CEE
T ss_pred ceeecccccCccccchhhhCCHHHHH-----------HHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCC--cEE
Confidence 110000 000 012222222 223344555 5899877665543 2343 34777788 689
Q ss_pred EcCeEEEccCCCCCCCCCCCCCc
Q psy11185 246 TAENILIATGGRPNYPDIPGAKE 268 (312)
Q Consensus 246 ~ad~vVlAtG~~p~~p~~~g~~~ 268 (312)
.||.||+|||+++..+.++|...
T Consensus 168 ~AdaVVLATG~~s~~~~~~G~~~ 190 (637)
T 2zxi_A 168 KTKAVVVTTGTFLNGVIYIGDKM 190 (637)
T ss_dssp ECSEEEECCTTCBTCEEEETTEE
T ss_pred EeCEEEEccCCCccCceecccee
Confidence 99999999999998888888754
No 182
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.62 E-value=7.8e-07 Score=85.95 Aligned_cols=106 Identities=14% Similarity=0.020 Sum_probs=70.8
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCC---------cc--chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEE
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPL---------RG--FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQY 88 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l---------~~--~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~ 88 (312)
.|+++|..|++.|++|+|+|+. .+- +. ...++.+++.+.+++.||++++++.+....-.. ...+.+
T Consensus 384 AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~~~~~--~d~lvi 461 (671)
T 1ps9_A 384 AGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQA--FDETIL 461 (671)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSSSSCC--SSEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHHHhhc--CCEEEE
Confidence 5799999999999999999984 431 11 123455677788888999999998775421101 125555
Q ss_pred eeccccccCCC------------------ccccccEEEEecCcchHHHHHHHHHCCCc
Q psy11185 89 KNVAEVRQDNT------------------HKYDYDLLVLGGGSGGLAAAKEAAAHGRK 128 (312)
Q Consensus 89 ~~~~~~~~~~~------------------~~~~~d~vivg~G~~gl~~a~~~~~~~~~ 128 (312)
..|..+..+.. ......++|||+|..|+.+|..+.+.+.+
T Consensus 462 AtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~ 519 (671)
T 1ps9_A 462 ASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGES 519 (671)
T ss_dssp CCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSC
T ss_pred ccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCC
Confidence 55543322110 01134689999999999999998877654
No 183
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.59 E-value=6.4e-08 Score=89.22 Aligned_cols=127 Identities=11% Similarity=0.058 Sum_probs=79.2
Q ss_pred hhhhhhhHhhhcc--------------------C-CeEEEEEcc-CCCccch-HH-------------------------
Q psy11185 20 DSGLECAGFLNGL--------------------G-FNATVMIRS-VPLRGFD-QQ------------------------- 51 (312)
Q Consensus 20 ~ig~E~A~~l~~~--------------------g-~~vtl~~~~-~~l~~~~-~~------------------------- 51 (312)
++|+|+|..|++. | .+|||++|+ .++..|. ++
T Consensus 157 ~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~ 236 (456)
T 1lqt_A 157 NVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDE 236 (456)
T ss_dssp HHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHH
T ss_pred HHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhh
Confidence 4789999999985 5 499999984 5543332 11
Q ss_pred -----------HHHHHHHHHhc------cceEEEeeceeeEEEEcCCCeeEEEEeec-------------cccccCCCcc
Q psy11185 52 -----------MAKLICEEMAE------GGVHFLHKCLPLSVTKLADGKLKVQYKNV-------------AEVRQDNTHK 101 (312)
Q Consensus 52 -----------~~~~~~~~l~~------~gi~~~~~~~v~~~~~~~~~~~~v~~~~~-------------~~~~~~~~~~ 101 (312)
+.+.+.+.+++ +||++++++.+.++..+ +....+.+... .++. ..+
T Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~---~~~ 312 (456)
T 1lqt_A 237 DAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGSGRVAAKDTGE---REE 312 (456)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSSSSEEEEEEEE---EEE
T ss_pred hhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCcccccccCCCc---eEE
Confidence 13445555556 79999999999999753 22113444320 0110 146
Q ss_pred ccccEEEEecCcchHHHHHHHHHCC-CcEEEEeccCC-CCCCcccccCCcccc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDYVIP-SPQGTTWGLGGTCVN 152 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~~~~-~~~~~v~a~Gd~~~~ 152 (312)
+++|.||++.|..+..+. . ...+ ...++++...+ ++.|++|++||++..
T Consensus 313 i~~d~vi~a~G~~p~~l~-g-l~~d~~g~i~vn~~~rvt~~pgvya~GD~~~g 363 (456)
T 1lqt_A 313 LPAQLVVRSVGYRGVPTP-G-LPFDDQSGTIPNVGGRINGSPNEYVVGWIKRG 363 (456)
T ss_dssp EECSEEEECSCEECCCCT-T-SCCBTTTTBCCEETTEETTCSSEEECTHHHHC
T ss_pred EEcCEEEEccccccCCCC-C-CcccCCCCeeECCCCcCCCCCCEEEEeccCCC
Confidence 899999999995332221 1 1111 12355565555 789999999997654
No 184
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.59 E-value=6.5e-08 Score=89.60 Aligned_cols=44 Identities=25% Similarity=0.396 Sum_probs=36.3
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCc
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGT 149 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~ 149 (312)
|+||||+|++|+.+|..+.+.+.+++++|+. .......|+.|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi 44 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGV 44 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCe
Confidence 7999999999999999999999999999987 4444445666654
No 185
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.57 E-value=2.7e-07 Score=83.97 Aligned_cols=146 Identities=18% Similarity=0.251 Sum_probs=75.8
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccc--cch--------hhHH--HHHHHHH
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVG--CIP--------KKLM--HQAALLG 168 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~--~~~--------~~~~--~~a~~~~ 168 (312)
..++|++|||+|++|+.+|..+.+.|.+++++|+.......-..+.|+.|...+ +.+ .... .......
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 446899999999999999999999999999999865422111111222232111 000 0000 0000011
Q ss_pred HHHHHHHHcCCccCC--ccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEe--eCCeEEEEecCCCeE
Q psy11185 169 EAIKDAVAYGWEIPN--VKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFI--DQHSVEATMKNGEKK 243 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~--~~~~~~v~~~~G~~~ 243 (312)
..+......+..+.. .....+.. ....+...+...+.+.++++..++ +..+ +...+.+++.+|
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~---------~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g--- 172 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDH---------SAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG--- 172 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESS---------CHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE---
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCC---------CHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc---
Confidence 111222223322111 00011100 011222234445566688887654 3332 345677887776
Q ss_pred EEEcCeEEEccCCCC
Q psy11185 244 TLTAENILIATGGRP 258 (312)
Q Consensus 244 ~i~ad~vVlAtG~~p 258 (312)
++.||.||+|||+.+
T Consensus 173 ~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 173 TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEESEEEECCCCSS
T ss_pred EEEeeEEEECCCCcc
Confidence 799999999999776
No 186
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.54 E-value=1.8e-07 Score=88.70 Aligned_cols=47 Identities=32% Similarity=0.425 Sum_probs=37.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGG 148 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd 148 (312)
.++|+||||+|++|+.+|..+.+.|.+|+++|+.........++.|.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg 166 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGG 166 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCce
Confidence 56899999999999999999999999999999876543333333343
No 187
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.53 E-value=7.1e-08 Score=85.35 Aligned_cols=115 Identities=14% Similarity=0.124 Sum_probs=71.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc--CCCccc--hHHHHHHHHHHHh----------------------------ccceEE
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS--VPLRGF--DQQMAKLICEEMA----------------------------EGGVHF 67 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~--~~l~~~--~~~~~~~~~~~l~----------------------------~~gi~~ 67 (312)
.+|+|+|..|++.| +||++.++ .+++.. .+.+.+++.+.+. +.|+ +
T Consensus 173 ~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i 250 (357)
T 4a9w_A 173 NSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-L 250 (357)
T ss_dssp HHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-C
T ss_pred cCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-e
Confidence 47999999999998 69999983 455442 3444444444333 3444 5
Q ss_pred EeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchH-HHHHH-HHHCCCcEEEEecc--CCCCCCcc
Q psy11185 68 LHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGL-AAAKE-AAAHGRKVIVLDYV--IPSPQGTT 143 (312)
Q Consensus 68 ~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl-~~a~~-~~~~~~~~~~ve~~--~~~~~~~v 143 (312)
..+..+.+++.. .+.+.++ .++++|.||++.|...- ..... ........+.+|.. ++++.|+|
T Consensus 251 ~~~~~v~~~~~~-----~v~~~~g--------~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd~~~l~~t~~~~v 317 (357)
T 4a9w_A 251 AAVPPPARFSPT-----GMQWADG--------TERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVDGSGLRALAVPSV 317 (357)
T ss_dssp CEECCCSEEETT-----EEECTTS--------CEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCBCTTSCBBSSCTTE
T ss_pred EEecCcceEeCC-----eeEECCC--------CEecCCEEEECCCcCCCCcccCcccccCCCCCccccCCcccCCCCCCe
Confidence 566667766532 4666555 57899999999995221 21111 11122234777877 89999999
Q ss_pred cccCCc
Q psy11185 144 WGLGGT 149 (312)
Q Consensus 144 ~a~Gd~ 149 (312)
|++|||
T Consensus 318 ya~Gd~ 323 (357)
T 4a9w_A 318 WLLGYG 323 (357)
T ss_dssp EECSSC
T ss_pred EEeccc
Confidence 999963
No 188
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.53 E-value=3.1e-07 Score=84.40 Aligned_cols=37 Identities=43% Similarity=0.680 Sum_probs=32.7
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
..++|++|||+|++|+.+|..+.+.+.+++++|+...
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4568999999999999999999999999999997653
No 189
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.51 E-value=7.5e-07 Score=84.97 Aligned_cols=49 Identities=27% Similarity=0.438 Sum_probs=39.8
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGT 149 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~ 149 (312)
..++|+||||+|.+|+.+|..+.+.|.+|+++|+........+++.|+.
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi 64 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGI 64 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCE
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCc
Confidence 3568999999999999999999999999999998765444445665654
No 190
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.49 E-value=3.9e-05 Score=72.05 Aligned_cols=116 Identities=17% Similarity=0.133 Sum_probs=80.4
Q ss_pred hhhhhhHhhh-ccCCeEEEEEcc-CCC--------cc-----------------------------chHHHHHHHHHHHh
Q psy11185 21 SGLECAGFLN-GLGFNATVMIRS-VPL--------RG-----------------------------FDQQMAKLICEEMA 61 (312)
Q Consensus 21 ig~E~A~~l~-~~g~~vtl~~~~-~~l--------~~-----------------------------~~~~~~~~~~~~l~ 61 (312)
.|+.+|..|+ +.|.+|+|+|+. .+- ++ ..+++.+++.+..+
T Consensus 19 aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~ 98 (540)
T 3gwf_A 19 GGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVD 98 (540)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHHHHHHHHHHHH
Confidence 5899999999 999999999983 321 11 13578888888888
Q ss_pred ccce--EEEeeceeeEEEEcCC-CeeE-------------EEEeecc--ccccCCC--------------------cccc
Q psy11185 62 EGGV--HFLHKCLPLSVTKLAD-GKLK-------------VQYKNVA--EVRQDNT--------------------HKYD 103 (312)
Q Consensus 62 ~~gi--~~~~~~~v~~~~~~~~-~~~~-------------v~~~~~~--~~~~~~~--------------------~~~~ 103 (312)
+.|+ .++++++|++++.+.+ +... +.+..|. .+..+.. ....
T Consensus 99 ~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~ 178 (540)
T 3gwf_A 99 RFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAG 178 (540)
T ss_dssp HTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTT
T ss_pred HcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEeecCCCcccccc
Confidence 8888 8899999998875433 1122 2333331 1111110 0112
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..++|||+|.+|+.++..+.+.+.++.+++...
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 359999999999999999998888898887643
No 191
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.48 E-value=8.3e-09 Score=90.92 Aligned_cols=143 Identities=16% Similarity=0.137 Sum_probs=87.1
Q ss_pred cccccEEEEecCcchHHHHHHHHH--CCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAA--HGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYG 178 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~--~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 178 (312)
..++|++|||+||+|+.+|..|.+ .|.+++++|+... .|+.+...++.+
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~--------~GG~~~~~~~~~--------------------- 113 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA--------PGGGSWLGGQLF--------------------- 113 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS--------CCTTTTCCSTTC---------------------
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC--------CCceEEeCCccC---------------------
Confidence 347899999999999999999864 5889999997543 333332222111
Q ss_pred CccCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEeeCCeEEEEecCCCeEEEEcCeEEEccCCCC
Q psy11185 179 WEIPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFIDQHSVEATMKNGEKKTLTAENILIATGGRP 258 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~~~~~~v~~~~G~~~~i~ad~vVlAtG~~p 258 (312)
+. ..++.+ ....+.+.++++... +. .....+.++++++..+
T Consensus 114 ---~~---~~l~~~----------------~~~~~~e~Gv~~~~~---------------~~--~~~~~~~~~~~~~~~~ 154 (326)
T 3fpz_A 114 ---SA---MVMRKP----------------AHLFLQELEIPYEDE---------------GD--YVVVKHAALFISTVLS 154 (326)
T ss_dssp ---CC---EEEETT----------------THHHHHHTTCCCEEC---------------SS--EEEESCHHHHHHHHHH
T ss_pred ---CH---HHHHHH----------------HHHHHHHcCCEEEEC---------------Cc--ceecceeEEEEcchhh
Confidence 00 001100 011233456654321 12 3445566677777777
Q ss_pred CCCCCCCCCcce----eccccccCCCCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 259 NYPDIPGAKEHC----ISSDDIFSLEKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 259 ~~p~~~g~~~~~----~~~~~~~~~~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+.+.++|...+. .++..........++++|+|+|.++++.+..+...+.++++
T Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i 211 (326)
T 3fpz_A 155 KVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVI 211 (326)
T ss_dssp HHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEE
T ss_pred hccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEE
Confidence 777777775431 12222223345677899999999999988887777666654
No 192
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.42 E-value=1.5e-06 Score=82.79 Aligned_cols=49 Identities=33% Similarity=0.503 Sum_probs=38.4
Q ss_pred cccccEEEEecCcchHHHHHHHHHCC--CcEEEEeccCCCCCCcccccCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHG--RKVIVLDYVIPSPQGTTWGLGGT 149 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~--~~~~~ve~~~~~~~~~v~a~Gd~ 149 (312)
..++|+||||+|++|+.+|..+.+.| .+++++|+.........++.|+.
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi 53 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGS 53 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCcc
Confidence 45689999999999999999999988 89999998654433344555553
No 193
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.41 E-value=1.8e-05 Score=72.96 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=59.9
Q ss_pred hhhhhhhHhhhc---cCCe---EEEEEcc-CCC-------------------------------------ccc-------
Q psy11185 20 DSGLECAGFLNG---LGFN---ATVMIRS-VPL-------------------------------------RGF------- 48 (312)
Q Consensus 20 ~ig~E~A~~l~~---~g~~---vtl~~~~-~~l-------------------------------------~~~------- 48 (312)
..|+.+|..|++ .|.+ |+|||++ .+- +.+
T Consensus 12 ~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~ 91 (464)
T 2xve_A 12 PSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFADYTFDEHFG 91 (464)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBTTBCHHHHHS
T ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccCCCCCCcccC
Confidence 468999999999 9999 9999984 421 000
Q ss_pred --------hHHHHHHHHHHHhccceE--EEeeceeeEEEEcCC-CeeEEEEeeccccccCCCccccccEEEEecC
Q psy11185 49 --------DQQMAKLICEEMAEGGVH--FLHKCLPLSVTKLAD-GKLKVQYKNVAEVRQDNTHKYDYDLLVLGGG 112 (312)
Q Consensus 49 --------~~~~~~~~~~~l~~~gi~--~~~~~~v~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G 112 (312)
..++.+++.+.+++.|++ +++++.|++++...+ +...|.+.++..+.. .++.+|.||++.|
T Consensus 92 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~---~~~~~d~VVvAtG 163 (464)
T 2xve_A 92 KPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTI---YSEEFDYVVCCTG 163 (464)
T ss_dssp SCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEE---EEEEESEEEECCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCce---EEEEcCEEEECCC
Confidence 156778888888888988 889999999876443 133455544211100 2456666676666
No 194
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.40 E-value=2e-06 Score=80.88 Aligned_cols=49 Identities=31% Similarity=0.451 Sum_probs=33.5
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTC 150 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~ 150 (312)
..++|+||||+|.+|+.+|..+.+ +.+|+++|+.........|+.|+.+
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~ 54 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIA 54 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-----------
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEE
Confidence 457899999999999999999998 9899999987654434455555543
No 195
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.40 E-value=6.9e-07 Score=71.33 Aligned_cols=115 Identities=26% Similarity=0.294 Sum_probs=70.2
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCccCC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWEIPN 183 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 183 (312)
+|++|||+|++|+.+|..+.+.+.+++++|...... +. . .... .++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~-~~----~---~~~~-------------------------~~~~ 48 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV-KG----V---SRVP-------------------------NYPG 48 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT-TT----C---SCCC-------------------------CSTT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc-cC----c---hhhh-------------------------ccCC
Confidence 589999999999999999999999999999753110 00 0 0000 0000
Q ss_pred ccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEeceeEEee--CCeEEEEecCCCeEEEEcCeEEEccCCCCCCC
Q psy11185 184 VKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNALGKFID--QHSVEATMKNGEKKTLTAENILIATGGRPNYP 261 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~~~~~~--~~~~~v~~~~G~~~~i~ad~vVlAtG~~p~~p 261 (312)
. +..+....+ ...+...+.+.++++..+....++ ...+.+++.+| ++.+|.||+|+|..|.++
T Consensus 49 ~-~~~~~~~~~-----------~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g---~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 49 L-LDEPSGEEL-----------LRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG---VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp C-TTCCCHHHH-----------HHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC---EEEEEEEEECCTTCCHHH
T ss_pred C-cCCCCHHHH-----------HHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC---EEEECEEEECCCCCCCcc
Confidence 0 001111222 222334566778888766533332 34577777777 789999999999988554
Q ss_pred CCCCC
Q psy11185 262 DIPGA 266 (312)
Q Consensus 262 ~~~g~ 266 (312)
...|.
T Consensus 114 ~~~g~ 118 (180)
T 2ywl_A 114 SLLGL 118 (180)
T ss_dssp HHHTC
T ss_pred ccCCC
Confidence 33343
No 196
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.39 E-value=8.7e-06 Score=72.14 Aligned_cols=34 Identities=41% Similarity=0.587 Sum_probs=31.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
++|++|||+|.+|+.+|..|.+.|.+++++|+..
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5799999999999999999999999999999864
No 197
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.39 E-value=4.6e-06 Score=77.90 Aligned_cols=38 Identities=39% Similarity=0.533 Sum_probs=34.3
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPS 138 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~ 138 (312)
..++|+||||+|.+|+.+|..+.+.|.+|+++|+....
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 46799999999999999999999999999999987654
No 198
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.37 E-value=3.6e-06 Score=79.96 Aligned_cols=148 Identities=19% Similarity=0.267 Sum_probs=77.8
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCC--CCCcccccCCcccccccchhhHHHHHHHHH---HHHHHHH
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPS--PQGTTWGLGGTCVNVGCIPKKLMHQAALLG---EAIKDAV 175 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~--~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~---~~~~~~~ 175 (312)
...+|++|||+|++|+.+|..+.+.|.+++++|..... ..+-..+.|... ............ ..+.+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia------~~~lv~el~al~g~~~~~~d~~ 92 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVA------KGQITREIDALGGEMGKAIDAT 92 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHH------HHHHHHHHHHHTCSHHHHHHHH
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhh------HHHHHHHHHhcccHHHHHHHhc
Confidence 34689999999999999999999999999999975311 000001111100 000000000000 0011111
Q ss_pred HcCCccCC--ccc------cccCHHHHHHHHHHHHHHhhHHHHHHHhc-CCceEEeceeEEe--eCCeEE-EEecCCCeE
Q psy11185 176 AYGWEIPN--VKS------VQHNWANLREAVQNHVKSVNWVTRVMLRD-KKVDYLNALGKFI--DQHSVE-ATMKNGEKK 243 (312)
Q Consensus 176 ~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gV~~~~~~~~~~--~~~~~~-v~~~~G~~~ 243 (312)
...+.... ..+ ...|...+.. .+...+.. .+++++.+.+... +...+. +.+.+| .
T Consensus 93 gi~f~~l~~~kgpav~~~r~~~Dr~~l~~-----------~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G--~ 159 (641)
T 3cp8_A 93 GIQFRMLNRSKGPAMHSPRAQADKTQYSL-----------YMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSG--R 159 (641)
T ss_dssp EEEEEEECSSSCTTTCEEEEEECHHHHHH-----------HHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--C
T ss_pred CCchhhcccccCccccchhhhcCHHHHHH-----------HHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCC--c
Confidence 11110000 000 1123333322 23334555 4888877665543 345554 777788 6
Q ss_pred EEEcCeEEEccCCCCCCCCCCCCC
Q psy11185 244 TLTAENILIATGGRPNYPDIPGAK 267 (312)
Q Consensus 244 ~i~ad~vVlAtG~~p~~p~~~g~~ 267 (312)
.+.||.||+|||+++..+.++|..
T Consensus 160 ~i~Ad~VVLATG~~s~~~i~~G~~ 183 (641)
T 3cp8_A 160 AIQAKAAILACGTFLNGLIHIGMD 183 (641)
T ss_dssp EEEEEEEEECCTTCBTCEEEETTE
T ss_pred EEEeCEEEECcCCCCCccceeeee
Confidence 899999999999988765555543
No 199
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.37 E-value=1e-06 Score=83.47 Aligned_cols=47 Identities=36% Similarity=0.495 Sum_probs=37.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGG 148 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd 148 (312)
..+|++|||+|++|+.+|..+.+.+.+++++|+.........++.|.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg 171 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGG 171 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCe
Confidence 36799999999999999999999999999999876543333344443
No 200
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.37 E-value=1.6e-06 Score=72.30 Aligned_cols=126 Identities=15% Similarity=0.163 Sum_probs=72.8
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccc-cccchhhHHHHHHHHHHHHHHHHHcCCcc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVN-VGCIPKKLMHQAALLGEAIKDAVAYGWEI 181 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 181 (312)
++|++|||+|++|+.+|..+.+.+.+++++|+.... .|-.|.. .+.++... .+.. +. .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~-------~G~~~~~~~~~~~~~~---------~~~~---~~-d- 61 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA-------VMMPFLPPKPPFPPGS---------LLER---AY-D- 61 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG-------TTCCSSCCCSCCCTTC---------HHHH---HC-C-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc-------CCcccCccccccchhh---------HHhh---hc-c-
Confidence 579999999999999999999999999999975311 1100100 00000000 0000 00 0
Q ss_pred CCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcC-CceEEeceeEEe--eCCe-EEEEecCCCeEEEEcCeEEEccCCC
Q psy11185 182 PNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDK-KVDYLNALGKFI--DQHS-VEATMKNGEKKTLTAENILIATGGR 257 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gV~~~~~~~~~~--~~~~-~~v~~~~G~~~~i~ad~vVlAtG~~ 257 (312)
. ..++. ..+...+...+.+. ++++....+..+ +... +.+.+.+| .++.||.||+|||.+
T Consensus 62 -~---~g~~~-----------~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g--~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 62 -P---KDERV-----------WAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEG--PPARGEKVVLAVGSF 124 (232)
T ss_dssp -T---TCCCH-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CCEECSEEEECCTTC
T ss_pred -C---CCCCH-----------HHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCC
Confidence 0 00011 12233344556665 888876554433 2333 35667777 589999999999987
Q ss_pred CCCCCCCCC
Q psy11185 258 PNYPDIPGA 266 (312)
Q Consensus 258 p~~p~~~g~ 266 (312)
+.....+|.
T Consensus 125 s~~~~~~G~ 133 (232)
T 2cul_A 125 LGARLFLGG 133 (232)
T ss_dssp SSCEEEETT
T ss_pred hhhceecCC
Confidence 765444454
No 201
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.34 E-value=3e-06 Score=81.41 Aligned_cols=49 Identities=33% Similarity=0.418 Sum_probs=39.1
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGT 149 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~ 149 (312)
..++|+||||+|.+|+.+|..+.+.|.+|+++|+.........++.|+.
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi 51 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGM 51 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCE
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCe
Confidence 4578999999999999999999999999999998765444444555543
No 202
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.31 E-value=4.1e-06 Score=79.59 Aligned_cols=48 Identities=29% Similarity=0.541 Sum_probs=38.5
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGG 148 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd 148 (312)
..++|+||||+|.+|+.+|..+.+.|.+|+++|+.........++.|+
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GG 52 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGG 52 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCc
Confidence 457899999999999999999999999999999875543334455554
No 203
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.29 E-value=2.2e-06 Score=77.76 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 35899999999999999999999999999999864
No 204
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.25 E-value=3.2e-05 Score=70.85 Aligned_cols=60 Identities=15% Similarity=0.049 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
++.+++.+..++.++.++++++|++++... +...|.+.+...+.. ..++.+|.||++.|.
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~~~V~~~~~~~G~~--~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GSWVVTYKGTKAGSP--ISKDIFDAVSICNGH 175 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET-TEEEEEEEESSTTCC--EEEEEESEEEECCCS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-CeEEEEEeecCCCCe--eEEEEeCEEEECCCC
Confidence 667788887777778888999999997643 335666655111100 025789999999995
No 205
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.24 E-value=4.9e-06 Score=77.48 Aligned_cols=138 Identities=16% Similarity=0.093 Sum_probs=74.6
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHHHHcCCc
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDAVAYGWE 180 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 180 (312)
...+|++|||+|++|+.+|..+.+.|.+++++|+.... |+ +......+....... ..... ...+ .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~--------g~-~~~~~~~~~~~~~l~--~~g~~---~~~~-~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKF--------SR-HNVLHLWPFTIHDLR--ALGAK---KFYG-R 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSC--------CC-CCEEECCHHHHHHHH--TTTHH---HHCT-T
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecccc--------CC-CCcccCChhHHHHHH--HcCCc---cccc-c
Confidence 34689999999999999999999999999999986532 22 111112221110000 00000 0000 0
Q ss_pred cCCccccccCHHHHHHHHHHHHHHhhHHHHHHHhcCCceEEece-eEEeeC-----CeEEEEe--c-CCCeEEEEcCeEE
Q psy11185 181 IPNVKSVQHNWANLREAVQNHVKSVNWVTRVMLRDKKVDYLNAL-GKFIDQ-----HSVEATM--K-NGEKKTLTAENIL 251 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gV~~~~~~-~~~~~~-----~~~~v~~--~-~G~~~~i~ad~vV 251 (312)
+.......++.. .+...+...+...++++..++ +..+.. ..+.++. . +|+..++.+|.||
T Consensus 155 ~~~~~~~~~~~~-----------~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV 223 (497)
T 2bry_A 155 FCTGTLDHISIR-----------QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLI 223 (497)
T ss_dssp TTCTTCCEEEHH-----------HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEE
T ss_pred ccccccccCCHH-----------HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEE
Confidence 100000112211 222234445556789887664 433321 2344544 3 5533578999999
Q ss_pred EccCCCCCCCCCC
Q psy11185 252 IATGGRPNYPDIP 264 (312)
Q Consensus 252 lAtG~~p~~p~~~ 264 (312)
+|+|+.+....+.
T Consensus 224 ~A~G~~S~~r~~~ 236 (497)
T 2bry_A 224 SAAGGKFVPEGFT 236 (497)
T ss_dssp ECCCTTCCCTTCE
T ss_pred ECCCCCccccccc
Confidence 9999877664433
No 206
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.20 E-value=2e-06 Score=80.74 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=32.3
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+.|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 345899999999999999999999999999999753
No 207
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.19 E-value=3.2e-05 Score=66.48 Aligned_cols=36 Identities=31% Similarity=0.552 Sum_probs=31.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHC-CCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAH-GRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~-~~~~~~ve~~~~ 137 (312)
.++|++|||+|++|+.+|..+.+. +.+++++|+...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 357999999999999999999986 889999998653
No 208
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.14 E-value=7.4e-05 Score=66.69 Aligned_cols=35 Identities=31% Similarity=0.545 Sum_probs=32.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|++|||+|.+|+.+|..|.+.+.+++++|+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36899999999999999999999999999999863
No 209
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.13 E-value=4.9e-05 Score=73.41 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=31.5
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.+|+||||+|.+|+.+|..|.+.|.+|+++|+..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4899999999999999999999999999999854
No 210
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.13 E-value=2.1e-05 Score=75.58 Aligned_cols=46 Identities=30% Similarity=0.414 Sum_probs=37.4
Q ss_pred cccccEEEEecCcchHHHHHHHHHC------CCcEEEEeccCCCCCCcccccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAH------GRKVIVLDYVIPSPQGTTWGLG 147 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~------~~~~~~ve~~~~~~~~~v~a~G 147 (312)
.+++|+||||+|.+|+.+|..+.+. +.+|+++++...... +.++.|
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s-~s~AqG 71 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS-GAVAQG 71 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC-STTTTC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC-cccccC
Confidence 5679999999999999999999886 889999998654433 335666
No 211
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.12 E-value=0.00036 Score=65.59 Aligned_cols=116 Identities=13% Similarity=0.106 Sum_probs=78.4
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCC--------c-----------------------------cchHHHHHHHHHHHhc
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPL--------R-----------------------------GFDQQMAKLICEEMAE 62 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l--------~-----------------------------~~~~~~~~~~~~~l~~ 62 (312)
.|+.+|..|++.|.+|+|+|+. .+- + ...+++.+++.+..++
T Consensus 20 aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~ 99 (545)
T 3uox_A 20 TGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADA 99 (545)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999984 320 0 0136788888888888
Q ss_pred cce--EEEeeceeeEEEEcCC-Cee-------------EEEEeec--cccccCCC-----------------cc------
Q psy11185 63 GGV--HFLHKCLPLSVTKLAD-GKL-------------KVQYKNV--AEVRQDNT-----------------HK------ 101 (312)
Q Consensus 63 ~gi--~~~~~~~v~~~~~~~~-~~~-------------~v~~~~~--~~~~~~~~-----------------~~------ 101 (312)
.++ .++++++|++++.+.+ +.. .+.+..| ..+..+.. ..
T Consensus 100 ~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~ 179 (545)
T 3uox_A 100 MDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPK 179 (545)
T ss_dssp HTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBS
T ss_pred cCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEccccccccccccc
Confidence 887 7888988888764322 111 2333334 21111100 01
Q ss_pred ----ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 ----YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ----~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
....++|||+|.+|+.++..+.+.+.++.+++...
T Consensus 180 ~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 180 GVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred ccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 12358999999999999999988888888887643
No 212
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.11 E-value=0.00054 Score=64.42 Aligned_cols=116 Identities=11% Similarity=0.077 Sum_probs=79.8
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCC--------cc-----------------------------chHHHHHHHHHHHhc
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPL--------RG-----------------------------FDQQMAKLICEEMAE 62 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l--------~~-----------------------------~~~~~~~~~~~~l~~ 62 (312)
.|+.+|..|++.|.+|+|+|+. .+- ++ ..+++.+++.+..++
T Consensus 32 aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~ 111 (549)
T 4ap3_A 32 AGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADR 111 (549)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHHHHHHHHHHHH
Confidence 4889999999999999999983 321 00 125788899998888
Q ss_pred cce--EEEeeceeeEEEEcCCC-ee-------------EEEEeec--cccccCCC---------------------cccc
Q psy11185 63 GGV--HFLHKCLPLSVTKLADG-KL-------------KVQYKNV--AEVRQDNT---------------------HKYD 103 (312)
Q Consensus 63 ~gi--~~~~~~~v~~~~~~~~~-~~-------------~v~~~~~--~~~~~~~~---------------------~~~~ 103 (312)
.++ +++++++|++++.+.+. .. .+.+..| ..+..+.. ....
T Consensus 112 ~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~ 191 (549)
T 4ap3_A 112 FDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTG 191 (549)
T ss_dssp TTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBT
T ss_pred cCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEeccccccccccCC
Confidence 888 88899999988754331 11 2333333 11111100 0112
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..++|||+|.+|+.++..+.+.+.++.+++...
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 358999999999999999998888888887643
No 213
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.10 E-value=2.9e-05 Score=69.43 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=31.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.+|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 57999999999999999999999999999997543
No 214
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.06 E-value=7.9e-06 Score=70.28 Aligned_cols=94 Identities=12% Similarity=0.098 Sum_probs=62.8
Q ss_pred hhhhhhhHhhhcc-CCeEEEEEcc-CCCcc--------------------------------------chHHHHHHHHHH
Q psy11185 20 DSGLECAGFLNGL-GFNATVMIRS-VPLRG--------------------------------------FDQQMAKLICEE 59 (312)
Q Consensus 20 ~ig~E~A~~l~~~-g~~vtl~~~~-~~l~~--------------------------------------~~~~~~~~~~~~ 59 (312)
.+|+++|..|++. |.+|+|+|+. .+... ...++...+.+.
T Consensus 49 ~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (284)
T 1rp0_A 49 SAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSK 128 (284)
T ss_dssp HHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHHHHHHHHHHH
Confidence 3789999999997 9999999984 43110 235566667777
Q ss_pred Hhc-cceEEEeeceeeEEEEcCCCeeEEEEeec------cccccCCCccccccEEEEecCc
Q psy11185 60 MAE-GGVHFLHKCLPLSVTKLADGKLKVQYKNV------AEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 60 l~~-~gi~~~~~~~v~~~~~~~~~~~~v~~~~~------~~~~~~~~~~~~~d~vivg~G~ 113 (312)
+.+ .||++++++.++++..+.+....+.+... ..+.......+++|.||++.|.
T Consensus 129 ~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 129 LLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 765 69999999999999864332224444310 0000001146889999999994
No 215
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.06 E-value=3.6e-05 Score=71.83 Aligned_cols=36 Identities=36% Similarity=0.634 Sum_probs=32.4
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 346899999999999999999999999999999864
No 216
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.03 E-value=3.6e-05 Score=70.70 Aligned_cols=35 Identities=34% Similarity=0.645 Sum_probs=32.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 36899999999999999999999999999999864
No 217
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.01 E-value=0.00013 Score=70.52 Aligned_cols=35 Identities=20% Similarity=0.158 Sum_probs=32.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+||||+|.+|+.+|..|.+.|.+|+++|+..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45899999999999999999999999999999854
No 218
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.00 E-value=4.6e-05 Score=68.82 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=31.9
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.-++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 346899999999999999999999999999999864
No 219
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.00 E-value=6.8e-05 Score=68.34 Aligned_cols=36 Identities=33% Similarity=0.389 Sum_probs=32.6
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCC-cEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~~~ 137 (312)
..+|+||||+|.+|+++|..|.+.|. +|+++|+...
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 36899999999999999999999999 9999998653
No 220
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.99 E-value=3.1e-05 Score=72.69 Aligned_cols=37 Identities=35% Similarity=0.527 Sum_probs=33.4
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
..++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3578999999999999999999999999999998654
No 221
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.99 E-value=7.5e-05 Score=67.12 Aligned_cols=36 Identities=44% Similarity=0.638 Sum_probs=32.5
Q ss_pred cccccEEEEecCcchHHHHHHHHH-CC-CcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAA-HG-RKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~-~~-~~~~~ve~~~ 136 (312)
..++|++|||+|.+|+.+|..|.+ .+ .+++++|+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 347899999999999999999999 88 8999999865
No 222
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.96 E-value=0.00018 Score=63.90 Aligned_cols=35 Identities=40% Similarity=0.648 Sum_probs=31.9
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
++|++|||+|.+|+++|..|.+.|.+++++|+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 47999999999999999999999999999998643
No 223
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.94 E-value=0.00012 Score=69.58 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=32.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 36899999999999999999999999999999763
No 224
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.91 E-value=0.00018 Score=64.63 Aligned_cols=35 Identities=43% Similarity=0.705 Sum_probs=32.0
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.+|++|||+|++|+++|..|.+.|.+++++|+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 47999999999999999999999999999998643
No 225
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.91 E-value=0.00013 Score=65.01 Aligned_cols=35 Identities=43% Similarity=0.693 Sum_probs=32.2
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.||++|||+||+|+.+|..|.+.|.+++++|+...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 48999999999999999999999999999997653
No 226
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.90 E-value=7.3e-06 Score=73.89 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35799999999999999999999999999999764
No 227
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.86 E-value=0.00019 Score=63.84 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=31.0
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
....|++|||+|.+|+++|..|. .|.+|+++|+..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 34689999999999999999999 588999999864
No 228
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.85 E-value=2.7e-05 Score=69.97 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=31.2
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4799999999999999999999999999999754
No 229
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.84 E-value=8.2e-05 Score=66.34 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=33.3
Q ss_pred ccccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 100 HKYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 100 ~~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
....+|++|||+|.+|+.+|..|.+.|.+++++|+..
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3457899999999999999999999999999999864
No 230
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.83 E-value=0.00042 Score=61.80 Aligned_cols=34 Identities=35% Similarity=0.605 Sum_probs=31.5
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
++|++|||+|.+|+++|..|.+.|.+++++|+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5799999999999999999999999999999764
No 231
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.82 E-value=5.1e-05 Score=66.69 Aligned_cols=36 Identities=22% Similarity=0.431 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~ 137 (312)
.++|++|||+|++|+.+|..+.+. +.+++++|+...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 468999999999999999999886 889999997653
No 232
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.82 E-value=4e-05 Score=69.28 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHC--CCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~ 136 (312)
..+|++|||+|.+|+++|..|.+. +.+++++|+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 358999999999999999999998 99999999754
No 233
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.79 E-value=0.00018 Score=64.35 Aligned_cols=35 Identities=43% Similarity=0.693 Sum_probs=32.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 57999999999999999999999999999998653
No 234
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.79 E-value=0.00024 Score=63.87 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=32.4
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 357999999999999999999999999999998643
No 235
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.77 E-value=2.2e-05 Score=74.28 Aligned_cols=36 Identities=36% Similarity=0.557 Sum_probs=30.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 468999999999999999999999999999997653
No 236
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.75 E-value=0.0005 Score=65.91 Aligned_cols=37 Identities=38% Similarity=0.539 Sum_probs=32.7
Q ss_pred cccccEEEEecCcchHHHHHHHH---H-CCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAA---A-HGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~---~-~~~~~~~ve~~~~ 137 (312)
..++|+||||+|.+|+.+|..+. + .|.+|+++|+...
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 45789999999999999999998 5 7889999998764
No 237
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.75 E-value=0.0001 Score=66.36 Aligned_cols=36 Identities=28% Similarity=0.263 Sum_probs=32.3
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
..+|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999997643
No 238
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.68 E-value=6.9e-05 Score=69.73 Aligned_cols=38 Identities=32% Similarity=0.588 Sum_probs=33.8
Q ss_pred ccccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 100 HKYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 100 ~~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
...++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34578999999999999999999999999999998643
No 239
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.66 E-value=0.00058 Score=64.20 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=33.1
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
..++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3468999999999999999999999999999998653
No 240
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.63 E-value=0.00046 Score=64.70 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=31.0
Q ss_pred cccEEEEecCcchHHHHHHHHH---CCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAA---HGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~---~~~~~~~ve~~~ 136 (312)
.+|++|||+|++|+.+|..|.+ .|.+++++|+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999999 899999999843
No 241
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.63 E-value=0.0004 Score=64.51 Aligned_cols=37 Identities=32% Similarity=0.504 Sum_probs=33.0
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
+.++|++|||+|++|+.+|..|.+.|.+++++|+...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4578999999999999999999999999999998653
No 242
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.63 E-value=0.00023 Score=66.81 Aligned_cols=69 Identities=13% Similarity=0.019 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHHHHHHHHHCC
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAAAKEAAAHG 126 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a~~~~~~~ 126 (312)
..+.+.+.+.+++.|++++++++|++++..++....|.+.++ ..+.+|.||++.|..+-.....+...+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G--------~~i~Ad~VVlA~G~~s~~~~~~l~~~G 288 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--------EEIKSRHVVLAVGHSARDTFEMLHERG 288 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS--------CEEECSCEEECCCTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC--------CEEECCEEEECCCCChhhHHHHHHHcC
Confidence 567777888888899999999999999865443334666554 468999999999986643323344444
No 243
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.62 E-value=0.0029 Score=58.71 Aligned_cols=34 Identities=38% Similarity=0.601 Sum_probs=31.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.+|++|||+|.+|+++|..+.+.|.+++++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4799999999999999999999999999999854
No 244
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.61 E-value=0.0016 Score=59.34 Aligned_cols=33 Identities=36% Similarity=0.475 Sum_probs=30.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCC-CcEEEEec
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDY 134 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~ 134 (312)
.++|+||||+|.+|+++|..|.+.+ .+|+++|+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 4689999999999999999999988 89999998
No 245
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.59 E-value=0.00071 Score=58.99 Aligned_cols=36 Identities=31% Similarity=0.472 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHC--CCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~ 137 (312)
.++|++|||+|++|+.+|..+.+. +.+++++|+...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 467999999999999999999987 889999997653
No 246
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.58 E-value=0.00089 Score=58.35 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=31.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.+|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3699999999999999999999999999999864
No 247
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.57 E-value=0.0011 Score=59.76 Aligned_cols=34 Identities=32% Similarity=0.488 Sum_probs=31.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCc-EEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRK-VIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~-~~~ve~~~ 136 (312)
++|++|||+|++|+.+|..|.+.|.+ ++++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 47999999999999999999999999 99999854
No 248
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.54 E-value=0.0009 Score=63.41 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=32.8
Q ss_pred cccccEEEEecCcchHHHHHHHHHC------CCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAH------GRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~------~~~~~~ve~~~~ 137 (312)
..++|+||||+|++|+.+|..|.+. +.+++++|+...
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~ 75 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 75 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC
Confidence 4578999999999999999999988 889999998643
No 249
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.53 E-value=0.0014 Score=61.16 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=30.7
Q ss_pred ccccEEEEecCcchHHHHHHHHH------------CCCcEEEEecc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAA------------HGRKVIVLDYV 135 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~------------~~~~~~~ve~~ 135 (312)
..+|+||||+|++|+.+|..|.+ .|.+++++|+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~ 51 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESP 51 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCC
Confidence 35799999999999999999998 88899999974
No 250
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.48 E-value=0.00034 Score=64.94 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=64.9
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCCcc-----c----------------------------hHHHHHHHHHHHhccceE
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPLRG-----F----------------------------DQQMAKLICEEMAEGGVH 66 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l~~-----~----------------------------~~~~~~~~~~~l~~~gi~ 66 (312)
.|+.+|..|++.|.+|+|+|+. .+.+. . ..++.+.+.+.+++.||+
T Consensus 103 aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~ 182 (497)
T 2bry_A 103 CGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVE 182 (497)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCE
Confidence 7899999999999999999984 43100 0 156777888888889999
Q ss_pred EEeeceeeEEEEcC--CCeeEEEEeec-cccccCCCccccccEEEEecCc
Q psy11185 67 FLHKCLPLSVTKLA--DGKLKVQYKNV-AEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 67 ~~~~~~v~~~~~~~--~~~~~v~~~~~-~~~~~~~~~~~~~d~vivg~G~ 113 (312)
+++++++++++.+. ++.+.+.+.+. +. . ..++.+|.||++.|.
T Consensus 183 v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g-~---~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 183 IHWGVKFTGLQPPPRKGSGWRAQLQPNPPA-Q---LASYEFDVLISAAGG 228 (497)
T ss_dssp EEESCEEEEEECCCSTTCCBEEEEESCCCH-H---HHTCCBSEEEECCCT
T ss_pred EEeCCEEEEEEEecCCCCEEEEEEEECCCC-C---EEEEEcCEEEECCCC
Confidence 99999999998532 22356666321 11 0 036789999999995
No 251
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.44 E-value=0.0013 Score=61.03 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=29.3
Q ss_pred ccEEEEecCcchHHHHHHHHH---CCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAA---HGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~---~~~~~~~ve~~~ 136 (312)
+|+||||+|++|+.+|..|.+ .|.+++++|+..
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 699999999999999999999 899999999753
No 252
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.37 E-value=0.003 Score=62.38 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=31.5
Q ss_pred cccEEEEecCcchHHHHHHHHHCCC-cEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~~ 136 (312)
.+|++|||+|.+|+++|..|.+.|. +|+++|+..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 5799999999999999999999998 899999865
No 253
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.33 E-value=0.0013 Score=63.04 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=32.0
Q ss_pred ccccEEEEecCcchHHHHHHHHH-CCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~ 136 (312)
.++|++|||+|++|+.+|..|.+ .|.+++++|+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 36899999999999999999999 899999999864
No 254
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.29 E-value=0.0029 Score=59.41 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=30.9
Q ss_pred ccccEEEEecCcchHHHHHHHHH---CCCcEEEEecc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAA---HGRKVIVLDYV 135 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~---~~~~~~~ve~~ 135 (312)
-.+|+||||+|++|+.+|..|.+ .+.+++++|+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 60 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAP 60 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCC
Confidence 35799999999999999999999 88899999974
No 255
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.28 E-value=0.00011 Score=64.56 Aligned_cols=33 Identities=21% Similarity=0.169 Sum_probs=29.9
Q ss_pred ccEEEEecCcchHHHHHHHHH---CCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAA---HGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~---~~~~~~~ve~~~ 136 (312)
+|++|||+|++|+.+|..|.+ .|.+++++|+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 489999999999999999998 888999999754
No 256
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00066 Score=61.54 Aligned_cols=83 Identities=22% Similarity=0.271 Sum_probs=63.4
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCCcc----------------------------------------------------
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPLRG---------------------------------------------------- 47 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l~~---------------------------------------------------- 47 (312)
.|+.+|..|++.|.+|+|+|+. .+.+.
T Consensus 38 AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~ 117 (417)
T 3v76_A 38 AGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDFVALVERHGIGW 117 (417)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHHHHHHHHcCCCc
Confidence 5899999999999999999984 32100
Q ss_pred ------------chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 48 ------------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 48 ------------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
...++.+.+.+.+++.||+++++++|++++.+++ .+.|...+ ..+.+|.||++.|.
T Consensus 118 ~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~~~V~~~~---------g~i~ad~VIlAtG~ 185 (417)
T 3v76_A 118 HEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-GFRVTTSA---------GTVDAASLVVASGG 185 (417)
T ss_dssp EECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EEEEEETT---------EEEEESEEEECCCC
T ss_pred EEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EEEEEECC---------cEEEeeEEEECCCC
Confidence 0136777888888889999999999999986543 34554433 25789999999995
No 257
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.27 E-value=0.00019 Score=59.92 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=31.6
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.+|++|||+||+|+.+|..|.+.|.+++++|+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4799999999999999999999999999999754
No 258
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.25 E-value=0.0017 Score=58.00 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=30.5
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.|++|||+|++|+.+|..+.+.|.++.++|...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 489999999999999999999999999999765
No 259
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.21 E-value=0.00039 Score=64.51 Aligned_cols=101 Identities=17% Similarity=0.132 Sum_probs=63.6
Q ss_pred HHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc-hHHHHHHH-HHC---CCcEEE-
Q psy11185 58 EEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG-GLAAAKEA-AAH---GRKVIV- 131 (312)
Q Consensus 58 ~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~-gl~~a~~~-~~~---~~~~~~- 131 (312)
+.+++.||++++++.+.+++.++ ....+.+.++ .++++|.||+++|.. ...++..+ .+. ....+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~-~v~~v~~~~g--------~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~ 335 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE-KVERVIDMNN--------HEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPV 335 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS-SCCEEEETTC--------CEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEecCC-ceEEEEeCCC--------eEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeec
Confidence 66778899999999999997532 2234555443 578999999999953 22333222 111 122343
Q ss_pred EeccCCCCCCcccccCCcccccccchhhHHHHHHHHHHHHHHH
Q psy11185 132 LDYVIPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGEAIKDA 174 (312)
Q Consensus 132 ve~~~~~~~~~v~a~Gd~~~~~~~~~~~~~~~a~~~~~~~~~~ 174 (312)
+|..++ +.++||++||+... + ....+..+++.+..+
T Consensus 336 vd~~~~-s~~~vya~GD~~~~-~-----~~~~A~~~g~~aa~~ 371 (493)
T 1y56_A 336 LDEYHR-IKDGIYVAGSAVSI-K-----PHYANYLEGKLVGAY 371 (493)
T ss_dssp CCTTSE-EETTEEECSTTTCC-C-----CHHHHHHHHHHHHHH
T ss_pred cccccC-cCCCEEEEeccCCc-c-----CHHHHHHHHHHHHHH
Confidence 677777 88999999996532 2 233455555555443
No 260
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.20 E-value=0.0025 Score=57.00 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=29.6
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
+++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 58999999999999999999999999999754
No 261
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.18 E-value=0.0019 Score=60.82 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
.++|++|||+|.+|+.+|..+.+.|.+++++|+.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~ 50 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMN 50 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4689999999999999999999999999999986
No 262
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.15 E-value=0.0012 Score=58.92 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=64.0
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCCc--------------------------------------------cc-------
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPLR--------------------------------------------GF------- 48 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l~--------------------------------------------~~------- 48 (312)
.|+.+|..|++.|.+|+|+|+. .... .+
T Consensus 22 aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 101 (379)
T 3alj_A 22 AGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPW 101 (379)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEEEEEECGGGCCE
T ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCceeeeccCCCCce
Confidence 7899999999999999999984 3210 00
Q ss_pred ----hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 49 ----DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 49 ----~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
-..+.+.+.+.+++.||++++++++++++. ++ .+.+.++ .++.+|.||.+.|...
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~~~g--------~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG--RLTLQTG--------EVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEETTS--------CEEECSEEEECCCTTC
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEECCC--------CEEEcCEEEECCCccH
Confidence 045567778888888999999999999875 33 5666554 4688999999999744
No 263
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.03 E-value=0.0021 Score=57.97 Aligned_cols=85 Identities=21% Similarity=0.290 Sum_probs=62.5
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCc--------------------c-------------------------------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLR--------------------G------------------------------- 47 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~--------------------~------------------------------- 47 (312)
..|+.+|..|++.|.+|+|+|+. .+.+ .
T Consensus 14 ~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~ 93 (401)
T 2gqf_A 14 AAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFISLVAEQGIT 93 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHHHHHHhCCCc
Confidence 37899999999999999999984 3310 0
Q ss_pred -------------chHHHHHHHHHHHhccceEEEeeceeeEEEEcC---CCeeEEEEeeccccccCCCccccccEEEEec
Q psy11185 48 -------------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLA---DGKLKVQYKNVAEVRQDNTHKYDYDLLVLGG 111 (312)
Q Consensus 48 -------------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~ 111 (312)
...++.+.+.+.+++.||++++++.++++..+. ++.+.+...+ ..+.+|.||+++
T Consensus 94 ~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~---------g~i~ad~VVlAt 164 (401)
T 2gqf_A 94 YHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS---------TQWQCKNLIVAT 164 (401)
T ss_dssp EEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT---------EEEEESEEEECC
T ss_pred eEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC---------CEEECCEEEECC
Confidence 124566777888888999999999999987541 2324444322 257899999999
Q ss_pred Cc
Q psy11185 112 GS 113 (312)
Q Consensus 112 G~ 113 (312)
|.
T Consensus 165 G~ 166 (401)
T 2gqf_A 165 GG 166 (401)
T ss_dssp CC
T ss_pred CC
Confidence 95
No 264
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.96 E-value=0.027 Score=53.12 Aligned_cols=35 Identities=37% Similarity=0.530 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+|++|||+|..|+.+|..+.+.|.+|+++|+..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999754
No 265
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.95 E-value=0.00069 Score=65.20 Aligned_cols=35 Identities=31% Similarity=0.438 Sum_probs=31.9
Q ss_pred ccccEEEEecCcchHHHHHHHHH-----CCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAA-----HGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~-----~~~~~~~ve~~~ 136 (312)
.++|++|||+|++|+.+|..|.+ .|.+++++|+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 36799999999999999999999 899999999764
No 266
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.91 E-value=0.0028 Score=56.79 Aligned_cols=88 Identities=16% Similarity=0.144 Sum_probs=65.8
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCC----------------c------------------------c-----------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPL----------------R------------------------G----------- 47 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l----------------~------------------------~----------- 47 (312)
..|+.+|..|++.|.+|+|+|+. ..- . +
T Consensus 16 ~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 95 (399)
T 2x3n_A 16 IGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSV 95 (399)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEEEEEETTSS
T ss_pred HHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCEEEecchHHh
Confidence 36899999999999999999983 320 0 0
Q ss_pred ---------chHHHHHHHHHHHhcc-ceEEEeeceeeEEEEcCCCee--EEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 48 ---------FDQQMAKLICEEMAEG-GVHFLHKCLPLSVTKLADGKL--KVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 48 ---------~~~~~~~~~~~~l~~~-gi~~~~~~~v~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
....+.+.+.+.+++. |+++++++++++++.++++ + .+.+.++ ..+.+|.||.+.|...
T Consensus 96 ~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g--------~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 96 DARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDG--------RVLRPRVVVGADGIAS 166 (399)
T ss_dssp CGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTS--------CEEEEEEEEECCCTTC
T ss_pred cccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCC--------CEEECCEEEECCCCCh
Confidence 0135667777778777 9999999999999875544 5 6666554 4688999999999744
Q ss_pred H
Q psy11185 116 L 116 (312)
Q Consensus 116 l 116 (312)
.
T Consensus 167 ~ 167 (399)
T 2x3n_A 167 Y 167 (399)
T ss_dssp H
T ss_pred H
Confidence 3
No 267
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.89 E-value=0.0036 Score=57.20 Aligned_cols=58 Identities=10% Similarity=0.095 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
..+.+.+.+.+++.||+++++++++++..+.+....|.+.++ ..+.+|.||++.|...
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G--------~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG--------EVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC--------CEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC--------CEEECCEEEECCCCCc
Confidence 345566777888899999999999999864332245655443 3578999999999633
No 268
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.77 E-value=0.0057 Score=58.20 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=72.3
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCCc------------------------c----------------------------
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPLR------------------------G---------------------------- 47 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l~------------------------~---------------------------- 47 (312)
.|+++|..+++.|.+|+|+|+. ..+. +
T Consensus 39 AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~~kgpav~~~r 118 (651)
T 3ces_A 39 AGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATR 118 (651)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEESTTSCGGGCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhcccCcccccch
Confidence 6899999999999999999984 2110 0
Q ss_pred --ch-HHHHHHHHHHHhc-cceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc----------
Q psy11185 48 --FD-QQMAKLICEEMAE-GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS---------- 113 (312)
Q Consensus 48 --~~-~~~~~~~~~~l~~-~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~---------- 113 (312)
.| ..+.+.+.+.+++ .||++ +++.++.+..+++....|.+.+| ..+.+|.||+++|.
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG--------~~I~Ad~VVLATGt~s~~~~i~G~ 189 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMG--------LKFRAKAVVLTVGTFLDGKIHIGL 189 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTS--------EEEEEEEEEECCSTTTCCEEECC-
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCC--------CEEECCEEEEcCCCCccCccccCc
Confidence 01 2355666777777 69999 57889888754333234555443 46889999999994
Q ss_pred -----------chHHHHHHHHHCCCcEEEEe
Q psy11185 114 -----------GGLAAAKEAAAHGRKVIVLD 133 (312)
Q Consensus 114 -----------~gl~~a~~~~~~~~~~~~ve 133 (312)
.++.++..+.+.|.++..+.
T Consensus 190 ~~~~~griGg~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 190 DNYSGGRAGDPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp ------------CCHHHHHHHTTTCCEEEEC
T ss_pred ccCCCCCccchhhhHHHHHHHhcCCeEEEec
Confidence 25577777778887776654
No 269
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.65 E-value=0.006 Score=53.02 Aligned_cols=41 Identities=5% Similarity=0.076 Sum_probs=30.9
Q ss_pred ceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccc-cccEEEEecCc
Q psy11185 64 GVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKY-DYDLLVLGGGS 113 (312)
Q Consensus 64 gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~d~vivg~G~ 113 (312)
|++++++++|++++.++++ +.+.+.++ ... .+|.||++.|+
T Consensus 119 g~~i~~~~~v~~i~~~~~~-~~v~~~~g--------~~~~~a~~vV~a~g~ 160 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEH-WNLLDAEG--------QNHGPFSHVIIATPA 160 (336)
T ss_dssp TCCEECSCCEEEEEECSSC-EEEEETTS--------CEEEEESEEEECSCH
T ss_pred cCcEEecCEEEEEEEeCCE-EEEEeCCC--------cCccccCEEEEcCCH
Confidence 7899999999999876544 55665444 233 48999999995
No 270
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.64 E-value=0.0013 Score=59.50 Aligned_cols=90 Identities=10% Similarity=0.064 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc--------c----hH
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS--------G----GL 116 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~--------~----gl 116 (312)
+..+...+...+++.| +|++++.|++++..+++ +.|.+.++ .++.+|.||++.|+ . ..
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~-v~v~~~~g--------~~~~ad~vi~a~~~~~l~~i~~~p~l~~~ 272 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV-VNVTVKDG--------HAFQAHSVIVATPMNTWRRIVFTPALPER 272 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS-EEEEETTS--------CCEEEEEEEECSCGGGGGGSEEESCCCHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe-EEEEECCC--------CEEEeCEEEEecCcchHhheeeCCCCCHH
Confidence 4444555666666778 99999999999865444 56666544 46899999999992 1 11
Q ss_pred HHHHHHHHC-CCcEEEEeccCCCCCCcccccCCc
Q psy11185 117 AAAKEAAAH-GRKVIVLDYVIPSPQGTTWGLGGT 149 (312)
Q Consensus 117 ~~a~~~~~~-~~~~~~ve~~~~~~~~~v~a~Gd~ 149 (312)
.... +... ....+.++...+++.+++|+.||.
T Consensus 273 ~~~~-~~~~~~~~~~kv~~~~~~~~~~i~~~~d~ 305 (431)
T 3k7m_X 273 RRSV-IEEGHGGQGLKILIHVRGAEAGIECVGDG 305 (431)
T ss_dssp HHHH-HHHCCCCCEEEEEEEEESCCTTEEEEBSS
T ss_pred HHHH-HHhCCCcceEEEEEEECCCCcCceEcCCC
Confidence 1111 1222 224566666667778999999985
No 271
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.55 E-value=0.0045 Score=55.25 Aligned_cols=88 Identities=17% Similarity=0.271 Sum_probs=63.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CC-----Cc-----------------------------------------------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VP-----LR----------------------------------------------- 46 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~-----l~----------------------------------------------- 46 (312)
..|+.+|..|++.|.+|+|+|+. .. .+
T Consensus 12 ~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (394)
T 1k0i_A 12 PSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQRRRIDLKRL 91 (394)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCceEEeccccc
Confidence 47899999999999999999983 21 00
Q ss_pred --c------chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEE-eeccccccCCCccccccEEEEecCc
Q psy11185 47 --G------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQY-KNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 47 --~------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
. ...++.+.+.+.+.+.|+++++++++++++.++++.+.+.+ .++.. .++.+|.||.+.|.
T Consensus 92 ~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~------~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 92 SGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGER------LRLDCDYIAGCDGF 161 (394)
T ss_dssp HTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEE------EEEECSEEEECCCT
T ss_pred cCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcE------EEEEeCEEEECCCC
Confidence 0 01345566677777789999999999999864333456776 44421 26889999999996
No 272
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.45 E-value=0.011 Score=55.69 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+++.||+++++++++++..+.++.+ .+.+.+.+. . ...+.+|.||+++|.
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g-~---~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 256 HVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYK-G---YYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTT-E---EEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCC-c---EEEEECCeEEEeCCC
Confidence 4556667777888999999999999987543433 355553111 0 035789999999985
No 273
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.42 E-value=0.022 Score=54.03 Aligned_cols=100 Identities=10% Similarity=0.102 Sum_probs=69.1
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCCc------------------------cc---------------------------
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPLR------------------------GF--------------------------- 48 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l~------------------------~~--------------------------- 48 (312)
.|+++|..+++.|.+|+|+|+. ..+. +.
T Consensus 38 AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~~kGpav~~~r 117 (637)
T 2zxi_A 38 AGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNTRKGKAVQSPR 117 (637)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEESTTSCGGGCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecccccCccccchh
Confidence 6799999999999999999984 2110 00
Q ss_pred ---h-HHHHHHHHHHHhc-cceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc----------
Q psy11185 49 ---D-QQMAKLICEEMAE-GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS---------- 113 (312)
Q Consensus 49 ---~-~~~~~~~~~~l~~-~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~---------- 113 (312)
| ..+.+.+.+.+++ .||++ +++.++.+..+++....|.+.++ ..+.+|.||+++|.
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG--------~~i~AdaVVLATG~~s~~~~~~G~ 188 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLG--------VEYKTKAVVVTTGTFLNGVIYIGD 188 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTS--------CEEECSEEEECCTTCBTCEEEETT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCC--------cEEEeCEEEEccCCCccCceeccc
Confidence 0 1345566667777 59999 57889888754333234655544 46889999999994
Q ss_pred -----------chHHHHHHHHHCCCcE
Q psy11185 114 -----------GGLAAAKEAAAHGRKV 129 (312)
Q Consensus 114 -----------~gl~~a~~~~~~~~~~ 129 (312)
.+..++..+.+.|..+
T Consensus 189 ~~~~~Gr~G~~~A~~la~~L~~lG~~v 215 (637)
T 2zxi_A 189 KMIPGGRLGEPRSEGLSDFYRRFDFPL 215 (637)
T ss_dssp EEEECSBTTBCCBCTHHHHHHHTTCCC
T ss_pred eecCCCCCCchhHHHHHHHHHhcCCce
Confidence 2366777787777654
No 274
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.39 E-value=0.0019 Score=59.80 Aligned_cols=37 Identities=32% Similarity=0.503 Sum_probs=32.0
Q ss_pred cccccEEEEecCcchHHHHHHHHH-CCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~~ 137 (312)
...+|+||||+|++||.+|..|.+ .|.+++++|+...
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~ 45 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNET 45 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCC
Confidence 347899999999999999999986 5889999997643
No 275
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.34 E-value=0.0066 Score=54.33 Aligned_cols=85 Identities=19% Similarity=0.296 Sum_probs=59.3
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCCcc------chHH-----------------------------------------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPLRG------FDQQ----------------------------------------- 51 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l~~------~~~~----------------------------------------- 51 (312)
..|+.+|..|++.|.+|+|+|+. ...+. +.+.
T Consensus 15 ~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 94 (397)
T 2vou_A 15 ISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGERVGSVPADWR 94 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCCccccccCccc
Confidence 47899999999999999999984 43211 1222
Q ss_pred ------HHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 52 ------MAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 52 ------~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
+.+.+.+.+ .|+++++++++++++.++++ +.+.+.++ .++.+|.||.+.|...
T Consensus 95 ~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g--------~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 95 FTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSET-VQMRFSDG--------TKAEANWVIGADGGAS 153 (397)
T ss_dssp EEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC-EEEEETTS--------CEEEESEEEECCCTTC
T ss_pred ccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE-EEEEECCC--------CEEECCEEEECCCcch
Confidence 222222222 37889999999999875444 66766654 4689999999999643
No 276
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.32 E-value=0.014 Score=52.00 Aligned_cols=55 Identities=16% Similarity=0.189 Sum_probs=39.0
Q ss_pred HHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 52 MAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 52 ~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
+.+.+.+.+++.|++++++++|++++..++....+...+ ..+.+|.||+++|...
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTR---------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETT---------CCEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCC---------ceEECCEEEECCchhH
Confidence 444566667778999999999999986543323344332 2578999999999744
No 277
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.28 E-value=0.011 Score=55.61 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=39.7
Q ss_pred HHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 52 MAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 52 ~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
+.+.+.+.+++.||++++++.++++..+.++.+ .+.+.+.+. + ...+.+|.||+++|.
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g-~---~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHT-G---YYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTT-E---EEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCC-c---EEEEEcCEEEEecCC
Confidence 445666777788999999999999986542433 455553111 0 025789999999984
No 278
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.25 E-value=0.014 Score=52.52 Aligned_cols=91 Identities=14% Similarity=0.200 Sum_probs=62.6
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCC---------cc-------------------------------------------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPL---------RG------------------------------------------- 47 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l---------~~------------------------------------------- 47 (312)
..|+-+|..|++.|.+|+|+|++... +.
T Consensus 15 ~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (421)
T 3nix_A 15 PAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFS 94 (421)
T ss_dssp HHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEEEEETTSCSS
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeEEEeehhhcC
Confidence 36899999999999999999984210 00
Q ss_pred ---------chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 48 ---------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 48 ---------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
....+.+.+.+.+++.|++++.++++++++..+++ ..+.+...+. ...++.+|.||.+.|...
T Consensus 95 ~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-~~v~v~~~~g----~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 95 NGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTD-SVTTIEDING----NKREIEARFIIDASGYGR 166 (421)
T ss_dssp CSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTE-EEEEEEETTS----CEEEEEEEEEEECCGGGC
T ss_pred CCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCC----CEEEEEcCEEEECCCCch
Confidence 01245566677777789999999999999865443 3344432211 002589999999999755
No 279
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.22 E-value=0.02 Score=53.97 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+++.||++++++.++++..+.++.+ .|.+.+.+. . ...+.+|.||+++|.
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G-~---~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYT-G---YYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTT-E---EEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCC-c---EEEEEcCEEEEeCCC
Confidence 4556667777888999999999999976441333 455553111 0 035789999999994
No 280
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.21 E-value=0.027 Score=49.77 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=39.5
Q ss_pred HHHHHHHHhccceEEEeeceeeEEEEcCCCeeE-EEEeeccccccCCCccccccEEEEecCcchHHHH
Q psy11185 53 AKLICEEMAEGGVHFLHKCLPLSVTKLADGKLK-VQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAAA 119 (312)
Q Consensus 53 ~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a 119 (312)
.+.+.+.+++.|++++.++++++++.+++. +. |...+ .++.+|.||+++|.....+.
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-v~gv~~~~---------g~i~a~~VV~A~G~~s~~l~ 209 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLIENNE-IKGVKTNK---------GIIKTGIVVNATNAWANLIN 209 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSB-EEEEEETT---------EEEECSEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEEECCE-EEEEEECC---------cEEECCEEEECcchhHHHHH
Confidence 344556677789999999999999865433 33 54432 25789999999997543333
No 281
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.11 E-value=0.017 Score=51.15 Aligned_cols=58 Identities=12% Similarity=0.046 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHHH
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAA 118 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~ 118 (312)
.+.+.+.+.+++.|++++++++|++++..++. +.+...+ ..+.+|.||+++|.....+
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~-~~v~~~~---------g~~~a~~vV~A~G~~s~~l 222 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEA-LFIKTPS---------GDVWANHVVVASGVWSGMF 222 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSS-EEEEETT---------EEEEEEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCE-EEEEcCC---------ceEEcCEEEECCChhHHHH
Confidence 45666777888889999999999999865443 4444322 2578999999999754333
No 282
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.10 E-value=0.019 Score=53.54 Aligned_cols=61 Identities=11% Similarity=0.102 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCC---eeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADG---KLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
..+...+.+.+++.|+++++++++++++.++++ .+.+.+.++++. .++.+|.||.+.|...
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~-----~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGE-----YDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEE-----EEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCe-----EEEEeCEEEECCCCcc
Confidence 356667777788889999999999999876541 467777665321 4688999999999744
No 283
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.06 E-value=0.02 Score=52.18 Aligned_cols=92 Identities=12% Similarity=0.001 Sum_probs=63.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc-CCC-----cc----------------------------------------------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS-VPL-----RG---------------------------------------------- 47 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~-~~l-----~~---------------------------------------------- 47 (312)
..|+.+|..|++.|.+|+|+|+. ..- .+
T Consensus 16 ~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (453)
T 3atr_A 16 FAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNGEGF 95 (453)
T ss_dssp HHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCceEEeECCCcE
Confidence 47899999999999999999983 210 00
Q ss_pred -c-hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 48 -F-DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 48 -~-~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
. -..+.+.+.+.+.+.|++++++++++++..+++....|.+.+...+. ..++.+|.||.+.|..
T Consensus 96 ~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~---~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 96 ELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE---ELTVYSKVVVEATGYS 161 (453)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE---EEEEECSEEEECCGGG
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc---eEEEEcCEEEECcCCc
Confidence 0 13466677777778899999999999988654332235565310010 0367899999999963
No 284
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.04 E-value=0.005 Score=55.66 Aligned_cols=33 Identities=42% Similarity=0.733 Sum_probs=30.6
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
+|+||||+|++|+.+|..|.+.|.+++++|+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 699999999999999999999999999999743
No 285
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.04 E-value=0.02 Score=50.39 Aligned_cols=54 Identities=17% Similarity=0.255 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
.+.+.+.+.+++.|++++.+++|++++..+++ +.+...+ ..+.+|.||+++|..
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~~~~---------g~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIETAD---------GEYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESS---------CEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEEECC---------CeEEcCEEEEcCCcc
Confidence 34455666777889999999999999865443 4444432 247899999999963
No 286
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.98 E-value=0.1 Score=50.92 Aligned_cols=35 Identities=34% Similarity=0.533 Sum_probs=31.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+|++|||+|++|+.+|..|.+.|.+++++|...
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 369 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 369 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccc
Confidence 35799999999999999999999999999999754
No 287
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.91 E-value=0.026 Score=53.44 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEee-ccccccCCCccccccEEEEecCcchH
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKN-VAEVRQDNTHKYDYDLLVLGGGSGGL 116 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~d~vivg~G~~gl 116 (312)
..+.+.+.+.+++.||+++.+++|++++...++...|.+.+ +.. .++.+|.||.+.|..+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~------~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGES------VTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEE------EEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCce------EEEEcCEEEECCCCcch
Confidence 34566677778889999999999999986434445677763 311 36899999999997554
No 288
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.87 E-value=0.007 Score=55.34 Aligned_cols=36 Identities=31% Similarity=0.422 Sum_probs=32.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.++|+||||+|.+|+.+|..|.+.|.+|+++|++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~ 45 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDH 45 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 468999999999999999999999999999998653
No 289
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.73 E-value=0.037 Score=49.06 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=63.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEccC-CCc-------------------------------------------cc-------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSV-PLR-------------------------------------------GF------- 48 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~-~l~-------------------------------------------~~------- 48 (312)
..|+-+|..|++.|.+|+|+|+.. .-. .+
T Consensus 14 ~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (397)
T 3cgv_A 14 PGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEKAGN 93 (397)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEC-----C
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEEEEeccccCC
Confidence 368899999999999999999842 100 00
Q ss_pred -------hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeE-EEEeeccccccCCCccccccEEEEecCcch
Q psy11185 49 -------DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLK-VQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 49 -------~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
...+.+.+.+.+++.|++++.++++++++.+ ++.+. |.+.+... ..++.+|.||.+.|...
T Consensus 94 ~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~-----~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 94 EVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNE-----IVDVRAKMVIAADGFES 162 (397)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTE-----EEEEEEEEEEECCCTTC
T ss_pred ceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCe-----EEEEEcCEEEECCCcch
Confidence 0235566777777889999999999999875 34343 66643211 14789999999999755
No 290
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=95.67 E-value=0.02 Score=49.94 Aligned_cols=42 Identities=17% Similarity=0.171 Sum_probs=32.7
Q ss_pred cceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 63 GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 63 ~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.|+++++++.|++++..+++ +.|.+.++ ..+.+|.||++..+
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~-~~v~~~~g--------~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDK-WEVSKQTG--------SPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSSS-EEEEESSS--------CCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCCE-EEEEECCC--------CEEEcCEEEECCCH
Confidence 38999999999999875544 56666554 35689999999984
No 291
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.65 E-value=0.024 Score=50.79 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+.+ +++++++++++++.+++ .+.+.+.++ +++.+|+||.+.|.
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~v~~~~g--------~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GVTVWFTDG--------SSASGDLLIAADGS 179 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETT-EEEEEETTS--------CEEEESEEEECCCT
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCC-cEEEEEcCC--------CEEeeCEEEECCCc
Confidence 344555555554 78999999999987544 366766655 56899999999996
No 292
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.61 E-value=0.029 Score=52.52 Aligned_cols=85 Identities=14% Similarity=0.078 Sum_probs=60.6
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CC--------Ccc-----------------------------chHHHHHHHHHHHhc
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VP--------LRG-----------------------------FDQQMAKLICEEMAE 62 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~--------l~~-----------------------------~~~~~~~~~~~~l~~ 62 (312)
.|+.+|..|++.|.+|+|+|+. .+ .++ ..+++.+++....++
T Consensus 27 aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~ 106 (542)
T 1w4x_A 27 SGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADK 106 (542)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHHHHHHHHHHHH
Confidence 6789999999999999999984 32 010 024566777766665
Q ss_pred cc--eEEEeeceeeEEEEcCC-CeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 63 GG--VHFLHKCLPLSVTKLAD-GKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 63 ~g--i~~~~~~~v~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+ +.++++++|.+++.+.+ +...|.+.++ .++.+|.||++.|.
T Consensus 107 ~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 107 FDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--------DRIRARYLIMASGQ 152 (542)
T ss_dssp TTGGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCS
T ss_pred cCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--------CEEEeCEEEECcCC
Confidence 44 67888999999876543 3345665544 46789999999994
No 293
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.61 E-value=0.037 Score=49.43 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=30.9
Q ss_pred eEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 65 VHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 65 i~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
+++++++++++++.++++ +.+.+.++ .++.+|.||.+.|.
T Consensus 141 ~~i~~~~~v~~i~~~~~~-v~v~~~~g--------~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 141 DTVIWDRKLVMLEPGKKK-WTLTFENK--------PSETADLVILANGG 180 (398)
T ss_dssp TSEEESCCEEEEEECSSS-EEEEETTS--------CCEEESEEEECSCT
T ss_pred CEEEECCEEEEEEECCCE-EEEEECCC--------cEEecCEEEECCCc
Confidence 578889999999875443 56666654 46789999999996
No 294
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.45 E-value=0.0077 Score=55.57 Aligned_cols=33 Identities=36% Similarity=0.438 Sum_probs=29.6
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
++||||+|.+||.+|..|.+.|.+|+++|+...
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 789999999999999999999999999998653
No 295
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.41 E-value=0.014 Score=51.39 Aligned_cols=35 Identities=31% Similarity=0.366 Sum_probs=32.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+|++|||+|.+|+++|..|.+.+.+++++|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 46899999999999999999999999999999764
No 296
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=95.39 E-value=0.074 Score=49.18 Aligned_cols=89 Identities=18% Similarity=0.134 Sum_probs=64.8
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCC--------------------------c---------------------cc----
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPL--------------------------R---------------------GF---- 48 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l--------------------------~---------------------~~---- 48 (312)
.|+-+|..|++.|.+|+|+|+. ... . .+
T Consensus 22 aGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (500)
T 2qa1_A 22 AGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAK 101 (500)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGGGSTTGGGCEE
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccccCCCCCCcee
Confidence 6889999999999999999973 211 0 00
Q ss_pred ---hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 49 ---DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 49 ---~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
-..+.+.+.+.+++.|+++++++++++++.+++ .+.+.+.++... .++.+|.||.+-|...
T Consensus 102 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~~~~g~-----~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 102 TVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GVTVEVRGPEGK-----HTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EEEEEEEETTEE-----EEEEESEEEECCCTTC
T ss_pred ecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eEEEEEEcCCCC-----EEEEeCEEEECCCcch
Confidence 134556667777778999999999999987544 466777665210 3678999999999643
No 297
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.35 E-value=0.071 Score=49.29 Aligned_cols=88 Identities=17% Similarity=0.120 Sum_probs=64.8
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCC--------------------------c---------------------cc----
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPL--------------------------R---------------------GF---- 48 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l--------------------------~---------------------~~---- 48 (312)
.|+-+|..|++.|.+|+|+|+. ... . .+
T Consensus 23 aGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (499)
T 2qa2_A 23 AGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGVK 102 (499)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGGGSTTCCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecccccCCCCCCceE
Confidence 7889999999999999999973 221 0 00
Q ss_pred ---hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 49 ---DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 49 ---~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
-..+.+.+.+.+++.|+++++++++++++.++++ +.+.+.++... .++.+|.||.+-|..
T Consensus 103 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~-----~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 103 AVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-VVVEVEGPDGP-----RSLTTRYVVGCDGGR 165 (499)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EEEEEECSSCE-----EEEEEEEEEECCCTT
T ss_pred ecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCc-----EEEEeCEEEEccCcc
Confidence 1445566677777789999999999999876544 66777665210 367899999999963
No 298
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.34 E-value=0.012 Score=53.41 Aligned_cols=35 Identities=31% Similarity=0.446 Sum_probs=31.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 35799999999999999999999999999999764
No 299
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.29 E-value=0.03 Score=52.74 Aligned_cols=89 Identities=20% Similarity=0.176 Sum_probs=64.1
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CC-------------------------------------Ccc---------------
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VP-------------------------------------LRG--------------- 47 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~-------------------------------------l~~--------------- 47 (312)
.|+-+|..|++.|.+|+|+|+. .. +..
T Consensus 60 aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (570)
T 3fmw_A 60 VGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQGLDFGLVDTRH 139 (570)
T ss_dssp HHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTCCBGGGSCCSC
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccccccccccCCCC
Confidence 6899999999999999999973 21 000
Q ss_pred ------chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 48 ------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 48 ------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
....+.+.+.+.+++.|++++.++++++++.++++ +.+.+.+.+.. .++.+|.||.+.|...
T Consensus 140 ~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v~v~~~~~~G~-----~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 140 PYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-VEVTVAGPSGP-----YPVRARYGVGCDGGRS 207 (570)
T ss_dssp CSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-EEEEEEETTEE-----EEEEESEEEECSCSSC
T ss_pred CeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-EEEEEEeCCCc-----EEEEeCEEEEcCCCCc
Confidence 12456677777788889999999999998865444 56666322110 3678999999999633
No 300
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=95.24 E-value=0.04 Score=52.35 Aligned_cols=82 Identities=17% Similarity=0.239 Sum_probs=56.3
Q ss_pred hhhhhhHhhhccCCeEEEEEcc-CCCc------------------------c----------------------------
Q psy11185 21 SGLECAGFLNGLGFNATVMIRS-VPLR------------------------G---------------------------- 47 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~-~~l~------------------------~---------------------------- 47 (312)
.|+++|..|++.|.+|+|+|+. ..+. +
T Consensus 32 AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~~kgpav~~~r 111 (641)
T 3cp8_A 32 AGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNRSKGPAMHSPR 111 (641)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECSSSCTTTCEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcccccCccccchh
Confidence 6899999999999999999984 1110 0
Q ss_pred --ch-HHHHHHHHHHHhc-cceEEEeeceeeEEEEcCCCeeE-EEEeeccccccCCCccccccEEEEecC
Q psy11185 48 --FD-QQMAKLICEEMAE-GGVHFLHKCLPLSVTKLADGKLK-VQYKNVAEVRQDNTHKYDYDLLVLGGG 112 (312)
Q Consensus 48 --~~-~~~~~~~~~~l~~-~gi~~~~~~~v~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vivg~G 112 (312)
.| ..+...+.+.+++ .||+++ +..+..+..++ +.+. |.+.++ ..+.+|.||+++|
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g~V~GV~t~~G--------~~i~Ad~VVLATG 171 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-GKFSSVTVRSG--------RAIQAKAAILACG 171 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTS--------CEEEEEEEEECCT
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-CEEEEEEECCC--------cEEEeCEEEECcC
Confidence 01 1445666677777 499995 56788876543 3333 555443 4688999999988
No 301
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=95.21 E-value=0.012 Score=54.72 Aligned_cols=35 Identities=23% Similarity=0.469 Sum_probs=30.6
Q ss_pred cccEEEEecCcchHHHHHHHHH-CCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~~ 137 (312)
+||+||||+|.+|..+|..|.+ .+.+|+++|....
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 7999999999999999999987 5568999997643
No 302
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.20 E-value=0.11 Score=48.94 Aligned_cols=66 Identities=12% Similarity=0.202 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeec---ccccc----CCCccccccEEEEecCcchH
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNV---AEVRQ----DNTHKYDYDLLVLGGGSGGL 116 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~---~~~~~----~~~~~~~~d~vivg~G~~gl 116 (312)
.+.+.+.+.+++.||++++++.+.++..++++.+ .|.+.+. ..+.. ....++.+|.||.+.|..+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4556677778888999999999999987554544 3655420 00000 00146889999999997543
No 303
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.19 E-value=0.01 Score=53.78 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=31.1
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
....|++|||+|++|+.+|..|.+.|.+++++|+..
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 345799999999999999999999999999999754
No 304
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.19 E-value=0.013 Score=54.38 Aligned_cols=36 Identities=25% Similarity=0.429 Sum_probs=32.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCC-CcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~~~~ 137 (312)
...|++|||+|.+||.+|..|.+.| .+++++|...+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 3579999999999999999999999 89999998643
No 305
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.18 E-value=0.054 Score=47.73 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=61.7
Q ss_pred hhhhhhhHhhhccCCeEEEEEc-cCCCc-------------------------------------c--------------
Q psy11185 20 DSGLECAGFLNGLGFNATVMIR-SVPLR-------------------------------------G-------------- 47 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~-~~~l~-------------------------------------~-------------- 47 (312)
..|+-+|..|++.|++|+|+|| +.+-. .
T Consensus 14 paGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (397)
T 3oz2_A 14 PGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEKAGN 93 (397)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEECSSSSC
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEeeccccccCC
Confidence 4689999999999999999997 33200 0
Q ss_pred ------chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 48 ------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 48 ------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
.-..+.+.+.+...+.|+++++++.+..+..+.+....+....... ..++.+|+||-+.|...
T Consensus 94 ~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~-----~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 94 EVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNE-----IVDVRAKMVIAADGFES 162 (397)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTE-----EEEEEEEEEEECCCTTC
T ss_pred ceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeeccccc-----ceEEEEeEEEeCCcccc
Confidence 0134556666777788999999999998876544322333322211 14678999999999644
No 306
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.12 E-value=0.062 Score=48.16 Aligned_cols=60 Identities=13% Similarity=0.081 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhc-cc-eEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 51 QMAKLICEEMAE-GG-VHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 51 ~~~~~~~~~l~~-~g-i~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
.+.+.+.+.+.+ .| +++++++++++++. +++ +.+.+.+...+. ..++.+|+||.+.|...
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~---~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGK---PQALGADVLVGADGIHS 169 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSC---EEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCC---ceEEecCEEEECCCccc
Confidence 445566666665 35 68999999999987 444 567776511010 03678999999999644
No 307
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.11 E-value=0.02 Score=51.36 Aligned_cols=36 Identities=28% Similarity=0.537 Sum_probs=32.2
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
...+|++|||+|++|+.+|..+.+.+.+++++|+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 446899999999999999999999999999999753
No 308
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.10 E-value=0.078 Score=49.12 Aligned_cols=60 Identities=13% Similarity=0.191 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
.+.+.+.+.+++.||+++.++++++++..++....+.+...+. ...++.+|.||.+.|..
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG----~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEG----VELMAHARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSS----CEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCC----CEEEEEcCEEEECCCcc
Confidence 4556677777788999999999999987543322355543211 00368899999999963
No 309
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=95.06 E-value=0.017 Score=52.00 Aligned_cols=32 Identities=38% Similarity=0.576 Sum_probs=30.0
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
|++|||+|.+|+.+|..|.+.|.+++++|+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 79999999999999999999999999999864
No 310
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=94.99 E-value=0.019 Score=53.34 Aligned_cols=35 Identities=40% Similarity=0.565 Sum_probs=31.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
.+|++|||+|.+|+.+|..|.+.|.+++++|....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999999999998643
No 311
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.95 E-value=0.022 Score=51.21 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.2
Q ss_pred cccEEEEecCcchHHHHHHHHHCC-CcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~~~ 136 (312)
+.|++|||+|.+|+.+|..|.+.| .+++++|+..
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 579999999999999999999999 8999999754
No 312
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=94.88 E-value=0.019 Score=52.53 Aligned_cols=37 Identities=27% Similarity=0.496 Sum_probs=31.3
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
....|++|||+|.+|+.+|..|.+.|.+++++|+...
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~ 50 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSAR 50 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 3467999999999999999999999999999998653
No 313
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=94.83 E-value=0.021 Score=51.24 Aligned_cols=34 Identities=35% Similarity=0.593 Sum_probs=31.0
Q ss_pred cccEEEEecCcchHHHHHHHHHC-CCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAH-GRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~-~~~~~~ve~~~ 136 (312)
++|++|||+|.+|+.+|..|.+. |.+++++|+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 57999999999999999999988 88999999754
No 314
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.68 E-value=0.021 Score=51.35 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=30.5
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
|++|||+|.+|+++|..|.+.|.+++++|+...
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 899999999999999999999999999998643
No 315
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=94.59 E-value=0.025 Score=50.08 Aligned_cols=33 Identities=30% Similarity=0.505 Sum_probs=30.2
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
+|++|||+|.+|+.+|..+.+.+.+++++|+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 589999999999999999999899999999754
No 316
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.58 E-value=0.043 Score=50.49 Aligned_cols=58 Identities=3% Similarity=-0.015 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
...+.+.+.+.+++.|++|++++.|++|+.+++....|.+.++ +++.+|.||.++++.
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g--------~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDG--------RRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS--------CEEECSCEEECCC--
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCC--------cEEEcCEEEECCCHH
Confidence 4567788889999999999999999999875544345777776 678999999999863
No 317
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=94.56 E-value=0.02 Score=50.94 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=30.0
Q ss_pred cEEEEecCcchHHHHHHHHHC--CCcEEEEeccCC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAH--GRKVIVLDYVIP 137 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~--~~~~~~ve~~~~ 137 (312)
|++|||+|++|+.+|..|.+. |.+++++|+...
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 799999999999999999988 899999998654
No 318
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.54 E-value=0.073 Score=46.45 Aligned_cols=64 Identities=8% Similarity=0.151 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHHHH
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAAA 119 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a 119 (312)
..+.+.+.+.+++.|++++++++|++++.++++.+.+.+.+++. ..+.+|.||+++|.....++
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~------~~~~a~~VV~A~G~~s~~l~ 213 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEP------MTLSCRVLINAAGLHAPGLA 213 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSC------EEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCce------eEEEeCEEEECCCcchHHHH
Confidence 46777788888999999999999999987655435566554421 36889999999997544433
No 319
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.52 E-value=0.026 Score=52.02 Aligned_cols=35 Identities=31% Similarity=0.592 Sum_probs=31.6
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
++|++|||+|.+|+.+|..|.+.|.+++++|....
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~ 73 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDR 73 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 37999999999999999999999999999997643
No 320
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.30 E-value=0.031 Score=51.37 Aligned_cols=36 Identities=39% Similarity=0.501 Sum_probs=32.1
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
...|++|||+|.+|+.+|..|.+.|.+++++|+...
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 357999999999999999999999999999997643
No 321
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=94.24 E-value=0.019 Score=52.28 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=30.8
Q ss_pred cccEEEEecCcchHHHHHHHHHCC------CcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG------RKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~------~~~~~ve~~~ 136 (312)
..|++|||+|.+|+++|..|.+.| .+++++|...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 479999999999999999999988 7899999864
No 322
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=94.19 E-value=0.28 Score=42.85 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=44.0
Q ss_pred hhhhhhHhhhcc--CCeEEEEEccCCCc---------------------------------------cchHHHHHHHHHH
Q psy11185 21 SGLECAGFLNGL--GFNATVMIRSVPLR---------------------------------------GFDQQMAKLICEE 59 (312)
Q Consensus 21 ig~E~A~~l~~~--g~~vtl~~~~~~l~---------------------------------------~~~~~~~~~~~~~ 59 (312)
.|+.+|..|++. |.+|+|+|+...+. ....++.+.+.+.
T Consensus 90 AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~~L~~~ 169 (344)
T 3jsk_A 90 CGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSK 169 (344)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecHHHHHHHHHHH
Confidence 578999999998 99999999842111 0134555666677
Q ss_pred Hhc-cceEEEeeceeeEEEEcC
Q psy11185 60 MAE-GGVHFLHKCLPLSVTKLA 80 (312)
Q Consensus 60 l~~-~gi~~~~~~~v~~~~~~~ 80 (312)
+.+ .||+++.++.+..+..+.
T Consensus 170 a~~~~gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 170 VLQRPNVKLFNATTVEDLITRK 191 (344)
T ss_dssp HHTCTTEEEEETEEEEEEEEEE
T ss_pred HHhCCCCEEEeCCEEEEEEecC
Confidence 776 599999999998887543
No 323
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.17 E-value=0.048 Score=49.40 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=31.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|++|||+|.+|+.+|..+.+.|.+++++|+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~ 39 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNP 39 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 36799999999999999999999999999999764
No 324
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.15 E-value=0.037 Score=49.18 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=31.3
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
...|++|||+|.+|+.+|..|.+.|.+++++|..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 3569999999999999999999999999999986
No 325
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=94.01 E-value=0.023 Score=49.77 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=29.2
Q ss_pred cEEEEecCcchHHHHHHHHHCC------CcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHG------RKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~------~~~~~ve~~~ 136 (312)
|++|||+|.+|+++|..|.+.+ .+++++|+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 8999999999999999999887 7899999764
No 326
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=93.96 E-value=0.046 Score=50.17 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=32.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+|++|||+|.+|+.+|..|.+.|.+++++|+..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~ 53 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNP 53 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccC
Confidence 46899999999999999999999999999999864
No 327
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=93.82 E-value=0.045 Score=52.14 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=31.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+||||+|++|+.+|..+.+.+.+++++|+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~ 79 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGE 79 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccC
Confidence 46899999999999999999999999999999754
No 328
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=93.68 E-value=0.38 Score=41.70 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=43.9
Q ss_pred hhhhhhHhhhcc--CCeEEEEEcc-CCCcc--------------------------------------chHHHHHHHHHH
Q psy11185 21 SGLECAGFLNGL--GFNATVMIRS-VPLRG--------------------------------------FDQQMAKLICEE 59 (312)
Q Consensus 21 ig~E~A~~l~~~--g~~vtl~~~~-~~l~~--------------------------------------~~~~~~~~~~~~ 59 (312)
.|+.+|..|++. |++|+|+|+. ..-.+ ...++...+.+.
T Consensus 76 aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~~~~~~L~~~ 155 (326)
T 2gjc_A 76 SGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSK 155 (326)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcchHHHHHHHHHH
Confidence 578999999998 9999999983 32100 234555666666
Q ss_pred Hhc-cceEEEeeceeeEEEEc
Q psy11185 60 MAE-GGVHFLHKCLPLSVTKL 79 (312)
Q Consensus 60 l~~-~gi~~~~~~~v~~~~~~ 79 (312)
+.+ .||+++.++.+..+..+
T Consensus 156 a~~~~GV~i~~~~~V~~Ll~~ 176 (326)
T 2gjc_A 156 VLQLPNVKLFNATCVEDLVTR 176 (326)
T ss_dssp HHTSTTEEEETTEEEEEEEEC
T ss_pred HHHhcCcEEEecceeeeeeec
Confidence 666 49999999999998765
No 329
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=93.64 E-value=0.037 Score=51.69 Aligned_cols=34 Identities=32% Similarity=0.521 Sum_probs=31.0
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+||||+|.+|+.+|..|.+ +.+|+++|...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~ 58 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGS 58 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSB
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCC
Confidence 46899999999999999999999 88999999754
No 330
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.63 E-value=0.041 Score=50.26 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=30.4
Q ss_pred ccEEEEecCcchHHHHHHHHHCCC--cEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGR--KVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~--~~~~ve~~~ 136 (312)
.|++|||+|.+|+++|..|.+.+. +++++|...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999998 999999754
No 331
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.53 E-value=0.24 Score=45.37 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+++.||+++.++.+ ++..+.+....+.+.+.. ..+.+|.||+++|.
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~-------g~~~a~~VVlAtGg 174 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRG-------LVEDVDKLVLATGG 174 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTE-------EECCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCC-------CeEEeeeEEECCCC
Confidence 34455666667789999999999 886543321233443211 23569999999994
No 332
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.47 E-value=0.21 Score=44.18 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=32.5
Q ss_pred eEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 65 VHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 65 i~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+++++++++++...++.+.+.+.+| +++++|+||-+-|..
T Consensus 124 ~~v~~~~~v~~~~~~~~~~v~v~~~dG--------~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 124 NTIQWNKTFVRYEHIENGGIKIFFADG--------SHENVDVLVGADGSN 165 (412)
T ss_dssp TTEECSCCEEEEEECTTSCEEEEETTS--------CEEEESEEEECCCTT
T ss_pred ceEEEEEEEEeeeEcCCCeEEEEECCC--------CEEEeeEEEECCCCC
Confidence 357788889988876666677888776 567899999888853
No 333
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=93.42 E-value=0.052 Score=50.04 Aligned_cols=35 Identities=34% Similarity=0.426 Sum_probs=31.6
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccCC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVIP 137 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~~ 137 (312)
..|++|||+|.+|+.+|..|.+.|.+++++|....
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 47 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGK 47 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 57999999999999999999999999999997643
No 334
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=93.35 E-value=0.13 Score=45.94 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=36.3
Q ss_pred HHHHHHHHHhccceEEEeeceee---------EEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHHH
Q psy11185 52 MAKLICEEMAEGGVHFLHKCLPL---------SVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAA 118 (312)
Q Consensus 52 ~~~~~~~~l~~~gi~~~~~~~v~---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~ 118 (312)
+...+.+.+++.|++++.+++++ +++.+++. +.|...+ ..+.+|.||+++|...-.+
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~-v~v~~~~---------g~i~a~~VV~A~G~~s~~l 239 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTH-QIVVHET---------RQIRAGVIIVAAGAAGPAL 239 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCC---------EEEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCe-EEEEECC---------cEEECCEEEECCCccHHHH
Confidence 55566777788899999999998 77543222 2332221 2578999999999754333
No 335
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.12 E-value=0.059 Score=50.39 Aligned_cols=35 Identities=34% Similarity=0.660 Sum_probs=31.8
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+||||+|++|+.+|..|.+.+.+++++|...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46899999999999999999999999999999754
No 336
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.08 E-value=0.077 Score=47.25 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=30.1
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.|++|||+|.+|+.+|..+.+.+.+++++|...
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 689999999999999999999888999999754
No 337
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.03 E-value=0.063 Score=49.38 Aligned_cols=35 Identities=31% Similarity=0.445 Sum_probs=31.5
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
...|++|||+|.+|+.+|..|.+.|.+++++|...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35799999999999999999999999999999754
No 338
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=92.99 E-value=0.086 Score=48.52 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=31.1
Q ss_pred ccccEEEEecCcchHHHHHHHHHCC-CcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~~~ 136 (312)
..+|++|||+|++|+.+|..|.+.+ .+++++|+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~ 43 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECND 43 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 4679999999999999999999988 6899999754
No 339
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=92.94 E-value=0.049 Score=51.35 Aligned_cols=36 Identities=25% Similarity=0.505 Sum_probs=31.6
Q ss_pred ccccEEEEecCcchHHHHHHHHHCC-CcEEEEeccCC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDYVIP 137 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~~~~ 137 (312)
.++|+||||+|.+|+.+|..|.+.+ .+|+++|....
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3689999999999999999999887 48999997654
No 340
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=92.90 E-value=0.057 Score=49.32 Aligned_cols=34 Identities=32% Similarity=0.353 Sum_probs=30.7
Q ss_pred cccEEEEecCcchHHHHHHHHHCC--CcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG--RKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~--~~~~~ve~~~ 136 (312)
.+|++|||+|.+|+.+|..|.+.+ .+++++|...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 469999999999999999999988 8899999754
No 341
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.63 E-value=0.085 Score=46.74 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=52.5
Q ss_pred hhhhhhhHhhhcc--CCeEEEEEcc-CC----------------------C-cc--------------------------
Q psy11185 20 DSGLECAGFLNGL--GFNATVMIRS-VP----------------------L-RG-------------------------- 47 (312)
Q Consensus 20 ~ig~E~A~~l~~~--g~~vtl~~~~-~~----------------------l-~~-------------------------- 47 (312)
..|+.+|..|++. |.+|+|+|+. .+ . ..
T Consensus 10 ~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 89 (381)
T 3c4a_A 10 PAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHNEPSLMSTG 89 (381)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESSSEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCCeeEEecCC
Confidence 4789999999999 9999999983 32 0 00
Q ss_pred ------chHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 48 ------FDQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 48 ------~~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
...++.+.+.+.+++.|+++++++++++++.. .++.+|.||.+.|..
T Consensus 90 ~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--------------------~~~~ad~vV~AdG~~ 142 (381)
T 3c4a_A 90 VLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL--------------------PLADYDLVVLANGVN 142 (381)
T ss_dssp SCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--------------------CGGGCSEEEECCGGG
T ss_pred CceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--------------------ccccCCEEEECCCCC
Confidence 12456667777777778888888877765310 124678888888853
No 342
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.63 E-value=0.17 Score=45.66 Aligned_cols=56 Identities=13% Similarity=0.131 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhccceEEEeec---eeeEEEEcCCCeeE-EEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKC---LPLSVTKLADGKLK-VQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~---~v~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+...+.+.+++.|++|++++ .|+++...++ .+. |.+.++ ..+.+|.||+++|.-
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~-~v~gV~t~~G--------~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENN-DVKGAVTADG--------KIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETT-EEEEEEETTT--------EEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCC-eEEEEEECCC--------CEEECCEEEECCCCC
Confidence 4677778888888999999999 9999986433 343 665544 468999999999963
No 343
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=92.38 E-value=0.067 Score=50.44 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=30.9
Q ss_pred ccccEEEEecCcchHHHHHHHHHC-CCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAH-GRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~-~~~~~~ve~~~ 136 (312)
.+||+||||+|.+|+.+|..|.+. +.+|+++|...
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999874 66899999765
No 344
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=92.22 E-value=0.12 Score=47.30 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=30.2
Q ss_pred cccEEEEecCcchHHHHHHHHHCCC-cEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~~ 136 (312)
.+|++|||+|++|+.+|..+.+.+. +++++|...
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~ 38 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 38 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 5699999999999999999999998 899999754
No 345
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.94 E-value=0.28 Score=44.99 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHhccc-eEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 49 DQQMAKLICEEMAEGG-VHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~g-i~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
...+.+.+.+.+++.| ++|++++.|++++..+++ +.|...++ ..+.+|.||+++|+
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~~~g--------~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTARDG--------REFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEETTC--------CEEEEEEEEECCCG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEECCC--------CEEEcCEEEECCCH
Confidence 4567788888888888 999999999999865443 55655444 46789999999996
No 346
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=91.93 E-value=0.075 Score=49.94 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=30.2
Q ss_pred cccEEEEecCcchHHHHHHHHH-CCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~ 136 (312)
++|+||||+|.+|+.+|..|.+ .+.+|+++|...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 5899999999999999999988 577899999754
No 347
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.48 E-value=0.27 Score=43.92 Aligned_cols=55 Identities=13% Similarity=0.054 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeE-EEEeeccccccCCCccccccEEEEecCc
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLK-VQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
...+.+.+.+.+++.|++|++++.|+++..++ +.+. |.+ ++ .++.+|.||+++|+
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~-~g--------~~~~ad~VV~a~~~ 250 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIA-DD--------RIHDADLVISNLGH 250 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE-TT--------EEEECSEEEECSCH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEE-CC--------EEEECCEEEECCCH
Confidence 35677888889999999999999999998754 3333 444 33 46889999999996
No 348
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.25 E-value=0.34 Score=42.42 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHHHHH
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAAAK 120 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a~ 120 (312)
..+...+.+.+++.|+++++++.|++++.+++. +.|...+ ..+.+|.||+++|.-.-.+..
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~---------g~i~a~~VV~A~G~~s~~l~~ 214 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDA---------GSYRAAVLVNAAGAWCDAIAG 214 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSS---------EEEEESEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCC---------CEEEcCEEEECCChhHHHHHH
Confidence 566677788888899999999999999875443 4444432 257899999999975444443
No 349
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.94 E-value=0.41 Score=46.05 Aligned_cols=56 Identities=5% Similarity=0.124 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCc-cccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTH-KYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~d~vivg~G~~ 114 (312)
..+...+.+.+++.|++++++++|++++.++++ +.|...++ . .+.+|.||+++|..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G--------~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTFGQS--------QAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEEC-C--------CCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEeCCC--------cEEEECCEEEECCCcc
Confidence 456667777888899999999999999875544 55555443 3 67899999999963
No 350
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=90.77 E-value=0.69 Score=43.13 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=36.5
Q ss_pred HHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 52 MAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 52 ~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
+.+.+.+.+++. +++++++++++.++++ +.+++.+...+. ..++.+|.||.+.|..
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v~v~~~~~~~G~---~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDH-VRATITDLRTGA---TRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSC-EEEEEEETTTCC---EEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCE-EEEEEEECCCCC---EEEEEeCEEEECCCCC
Confidence 444555555554 8889999999875544 667776521111 1367899999999963
No 351
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=90.47 E-value=0.38 Score=42.31 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
..+.+.+.+.+++.|++++++++|++++..+++ +.+...+ ..+.+|.||+++|...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~---------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VKIETAN---------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EEEEETT---------EEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EEEEeCC---------CEEEeCEEEEecCccH
Confidence 577788888889999999999999999875443 4444322 2578999999999743
No 352
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=90.43 E-value=0.27 Score=43.97 Aligned_cols=55 Identities=11% Similarity=0.144 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
...+.+.+.+.+++.|++|++++.|++++.++ +.+ | ..++ ..+.+|.||+++|+.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v-V-~~~g--------~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEE-KKV-Y-TRDN--------EEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE-E-ETTC--------CEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE-E-EeCC--------cEEEeCEEEECCCHH
Confidence 46788888999999999999999999998643 333 3 3333 468899999999963
No 353
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=90.38 E-value=1.3 Score=41.95 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhccc-eEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGG-VHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~g-i~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+...+.+.+.+.| |+++.++.+.++..+.+....+...+...+. ...+.++.||+++|.
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~---~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT---LVQIRANAVVMATGG 195 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTE---EEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCc---EEEEEcCeEEECCCC
Confidence 34445556666678 9999999999987643322234333211110 025789999999994
No 354
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.34 E-value=0.36 Score=46.27 Aligned_cols=56 Identities=11% Similarity=0.205 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+...+.+.+++.|++++++++|++++.++++ +.|...++ .++.+|.||+++|..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G--------~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-WLLNFAGD--------QQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEETTS--------CEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-EEEEECCC--------CEEECCEEEECCCcc
Confidence 355666777788899999999999999875443 45554443 458899999999963
No 355
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.19 E-value=0.26 Score=40.28 Aligned_cols=31 Identities=23% Similarity=0.182 Sum_probs=25.1
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++|+|||||.+|...+..|...+..|+|
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtV 59 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITV 59 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 4578899999999999777776666668876
No 356
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=90.09 E-value=0.19 Score=46.37 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=31.1
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
++|++|||+|++|+.+|..+.+.+.+++++|...
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 6899999999999999999999899999999754
No 357
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=89.77 E-value=0.21 Score=46.24 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=31.9
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..++|++|||+|++|+.+|..+.+.+.+++++|...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 346899999999999999999999888999999653
No 358
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=89.60 E-value=0.33 Score=43.05 Aligned_cols=30 Identities=37% Similarity=0.492 Sum_probs=25.9
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+.+|+|||+|.+|+-+|..|...+.+|+|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~V 72 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTI 72 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 456899999999999999999887777776
No 359
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=89.48 E-value=0.24 Score=47.43 Aligned_cols=35 Identities=29% Similarity=0.462 Sum_probs=31.5
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
...|++|||+|++|+.+|..+.+.|.+++++|...
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~ 140 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 140 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35799999999999999999999999999999754
No 360
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=89.42 E-value=0.23 Score=45.59 Aligned_cols=30 Identities=27% Similarity=0.424 Sum_probs=26.2
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|||+|.+|+.+|..|...+.+|+|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~v 61 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTV 61 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 456899999999999999999887778876
No 361
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.33 E-value=0.9 Score=39.27 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=30.6
Q ss_pred hhhhh-hhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEee
Q psy11185 20 DSGLE-CAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHK 70 (312)
Q Consensus 20 ~ig~E-~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~ 70 (312)
.+||. +|..|.++|++|++.|+... ++ ..+.|++.||+++.+
T Consensus 14 g~Gms~~A~~L~~~G~~V~~~D~~~~----~~-----~~~~L~~~gi~v~~g 56 (326)
T 3eag_A 14 GTFMGGLAAIAKEAGFEVSGCDAKMY----PP-----MSTQLEALGIDVYEG 56 (326)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCC----TT-----HHHHHHHTTCEEEES
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCC----cH-----HHHHHHhCCCEEECC
Confidence 37786 89999999999999997422 11 134567789888754
No 362
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=89.07 E-value=0.27 Score=46.42 Aligned_cols=35 Identities=31% Similarity=0.524 Sum_probs=31.3
Q ss_pred ccccEEEEecCcchHHHHHHHHH-CCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAA-HGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~-~~~~~~~ve~~~ 136 (312)
.++|+||||+|++|+.+|..|.+ .+.+++++|...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999999999999999998 688999999754
No 363
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=88.76 E-value=0.5 Score=43.23 Aligned_cols=57 Identities=11% Similarity=-0.026 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCe-eEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGK-LKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
.++.+.+.+.+++.|+++++++.|+++..+.++. ..|.+.+| +.+.+|.||+++|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G--------~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDG--------EIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTS--------CEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCC--------cEEECCEEEECCCcc
Confidence 4677788888999999999999999998633343 35666554 468999999999854
No 364
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=88.67 E-value=0.73 Score=43.13 Aligned_cols=65 Identities=15% Similarity=-0.026 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHH
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLA 117 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~ 117 (312)
..+...+.+.+.+.|++++.+++|+++...++....+.+.+..++.. ..+.+|.||.++|+-.-.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~---~~i~A~~VV~AaG~~s~~ 234 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTT---HTIYAKKVVNAAGPWVDT 234 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCE---EEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCce---EEEECCEEEECCCcchHH
Confidence 45666677778889999999999999987544323566655222111 467899999999975433
No 365
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=88.65 E-value=0.32 Score=47.98 Aligned_cols=35 Identities=29% Similarity=0.462 Sum_probs=31.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
...+++|||+|++|+.+|..|.+.|.+++++|...
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~ 311 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 311 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 35799999999999999999999999999999754
No 366
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=88.45 E-value=0.92 Score=41.82 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeeccccccCCCcccccc-EEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQDNTHKYDYD-LLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d-~vivg~G~ 113 (312)
.+.+.+.+.+++.||+|++++.++++..+.++.+ .|.+.++.. ...+.+| .||+++|-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~-----~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGK-----EVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTE-----EEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCc-----EEEEEeCCeEEEeCCC
Confidence 7888888889999999999999999987534433 455554321 1357896 89999884
No 367
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.17 E-value=0.29 Score=45.71 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=31.2
Q ss_pred ccccEEEEecCcchHHHHHHHHHC-CCcEEEEeccC
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAH-GRKVIVLDYVI 136 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~-~~~~~~ve~~~ 136 (312)
..+|+||||+|.+|+.+|..|.+. +.+++++|...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 468999999999999999999987 77999999754
No 368
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=87.99 E-value=0.85 Score=41.08 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEc--------------CCCee-EEEEeeccccccCCCccc--cccEEEEecC
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKL--------------ADGKL-KVQYKNVAEVRQDNTHKY--DYDLLVLGGG 112 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~--------------~~~~~-~v~~~~~~~~~~~~~~~~--~~d~vivg~G 112 (312)
..+.+.+.+.+++.|++++.+++|++++.+ .++.+ .+...+ .++ .+|.||+++|
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------g~i~~~Ad~VV~AtG 251 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------GTRVEVGEKLVVAAG 251 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------SCEEEEEEEEEECCG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------CEEeecCCEEEECCC
Confidence 477788888889999999999999999761 22322 343322 257 8999999999
Q ss_pred cch
Q psy11185 113 SGG 115 (312)
Q Consensus 113 ~~g 115 (312)
...
T Consensus 252 ~~s 254 (448)
T 3axb_A 252 VWS 254 (448)
T ss_dssp GGH
T ss_pred cCH
Confidence 743
No 369
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=86.49 E-value=1 Score=39.75 Aligned_cols=54 Identities=17% Similarity=0.107 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
.+...+.+.+++.|++++++++|++++.++++ +.+... + .++.+|.||+++|.-
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v~v~t~-~--------g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADG-VSVTTD-R--------GTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEES-S--------CEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-EEEEEC-C--------CEEEcCEEEEcCCcC
Confidence 45566677778889999999999999865433 444322 1 357899999999964
No 370
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.46 E-value=1.3 Score=40.21 Aligned_cols=46 Identities=22% Similarity=0.148 Sum_probs=33.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeece
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKCL 72 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~~ 72 (312)
.+|+.+|.+|.++|++|++.++...- .++. .+.|++.||+++++..
T Consensus 19 ~sG~s~A~~l~~~G~~V~~~D~~~~~--~~~~-----~~~L~~~gi~~~~g~~ 64 (451)
T 3lk7_A 19 RSGEAAARLLAKLGAIVTVNDGKPFD--ENPT-----AQSLLEEGIKVVCGSH 64 (451)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCGG--GCHH-----HHHHHHTTCEEEESCC
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCccc--CChH-----HHHHHhCCCEEEECCC
Confidence 37999999999999999999974210 1121 3567778999876643
No 371
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=85.57 E-value=0.89 Score=41.22 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+++.|++|++++.|++++..+++...|.. ++ .++.+|.||+++++
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~--------~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RD--------SSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SS--------CEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CC--------eEEEcCEEEECCCH
Confidence 57778888888899999999999999875444244433 22 45789999999985
No 372
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=85.13 E-value=1.5 Score=43.13 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHH
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLA 117 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~ 117 (312)
..+...+.+.+++.|+++++++.|++++..++....|...+ .++.+|.||+++|.-...
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~---------G~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTAD---------GVIPADIVVSCAGFWGAK 209 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT---------EEEECSEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECC---------cEEECCEEEECCccchHH
Confidence 36777788888899999999999999986443312344322 257899999999975433
No 373
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=84.74 E-value=1.4 Score=41.25 Aligned_cols=64 Identities=14% Similarity=0.116 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcch
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGG 115 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~g 115 (312)
+..+...+.+.+.+.|++++.+++|+++..+++....|.+.+..++. ...+.+|.||+++|+-.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~---~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDE---VIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCC---EEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCC---EEEEEcCEEEECCChhH
Confidence 34556666677888999999999999998654332245554321110 02678999999999753
No 374
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=84.56 E-value=1.5 Score=40.80 Aligned_cols=55 Identities=24% Similarity=0.242 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhcc-ceEEEeeceeeEEEEcCCCe-eEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 51 QMAKLICEEMAEG-GVHFLHKCLPLSVTKLADGK-LKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 51 ~~~~~~~~~l~~~-gi~~~~~~~v~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
.+.+.+.+.+++. ||+++.+ +|++++.++++. ..|.+.++ .++.+|.||.+.|..
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G--------~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATG--------RVFDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTS--------CEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCC--------CEEECCEEEECCCCc
Confidence 4667777788888 9999999 999998644442 34555443 468999999999963
No 375
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=84.35 E-value=1.9 Score=39.63 Aligned_cols=56 Identities=21% Similarity=0.140 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCe-eEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGK-LKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+.+.+.+.+++.|++++.+ ++++++.+.++. +.|.+.++ .++.+|.||.+.|..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g--------~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQH--------GEISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCC--------CEEEcCEEEECCCcc
Confidence 455666777777789999999 899998644442 35555544 468999999999963
No 376
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=84.32 E-value=1.7 Score=39.93 Aligned_cols=67 Identities=13% Similarity=0.077 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchHHHH
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGLAAA 119 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl~~a 119 (312)
+..+...+.+.+.+.|++++.+++|+++..++ +...+.+.+...+. ...+.+|.||+++|+-.-.+.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~---~~~i~A~~VV~AtG~~s~~l~ 214 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGK---KYSWQARGLVNATGPWVKQFF 214 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCC---EEEEEESCEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCC---EEEEECCEEEECCChhHHHHH
Confidence 34567777888888999999999999998654 43456664311110 026789999999997544433
No 377
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=84.20 E-value=0.53 Score=40.55 Aligned_cols=27 Identities=26% Similarity=0.278 Sum_probs=21.9
Q ss_pred eEEEEcCchhhHHHHHHhhc--Cceeeee
Q psy11185 285 KTLVVGAGYIGKLETWDSNS--GCGNVTI 311 (312)
Q Consensus 285 ~v~VvG~G~sa~~~a~~l~~--~~~~V~~ 311 (312)
.|+|||+|+.|+-+|.+|.. .+.+|+|
T Consensus 67 DV~IIGaGPAGlsAA~~la~~r~G~~V~v 95 (326)
T 3fpz_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCI 95 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEE
T ss_pred CEEEECCCHHHHHHHHHHHHhCCCCeEEE
Confidence 49999999999999999863 3557765
No 378
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=83.44 E-value=2.1 Score=39.70 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCe-eEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGK-LKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+.+.+.+.+++.||+++.+ ++++++.++++. ..|.+.++ ..+.+|.||.+.|..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEG--------RTLEADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTS--------CEECCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCC--------cEEEeCEEEECCCCc
Confidence 566677888888899999999 899988654443 35555443 468999999999963
No 379
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=83.22 E-value=1.6 Score=39.56 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcC-CCee-EEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLA-DGKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~-~~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+.+.+.+.+++.|.++++++.|+++.... ++.+ .|.. ++ ..+.+|.||+++|+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g--------~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KL--------GTFKAPLVIADPTYF 299 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TT--------EEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CC--------eEEECCEEEECCCcc
Confidence 4677778888888999999999999998652 3433 3333 33 467899999999975
No 380
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.22 E-value=1.5 Score=32.44 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=30.9
Q ss_pred cccccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 101 KYDYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 101 ~~~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.+.-.++|+|.|..|..++..|.+.+.+++++|...
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 345579999999999999999999999999998643
No 381
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=83.22 E-value=0.88 Score=43.51 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=26.3
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|||+|.+|+.+|..|...+.+|+|
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~ 135 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTL 135 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 456899999999999999999888888876
No 382
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=83.09 E-value=0.97 Score=40.71 Aligned_cols=56 Identities=9% Similarity=-0.079 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
..+.+.+.+.+++.|+++++++.|+++...+ +.+..+..++ ..+.+|.||+++|+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~~g--------~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKSEG--------EVARCKQLICDPSYV 289 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEETT--------EEEECSEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEECC--------eEEECCEEEECCCCC
Confidence 4667777888888899999999999998643 4333223333 468899999999975
No 383
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=82.56 E-value=1.1 Score=42.71 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.6
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
++|++|+|+|..+..+|..+.+.|.+++++|++
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~ 40 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSR 40 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 799999999999999999999999999999964
No 384
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=82.04 E-value=3.1 Score=39.08 Aligned_cols=61 Identities=11% Similarity=0.164 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCe-eEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGK-LKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
..+...+.+.+++.||+|++++.++++..+.++. ..+.+.+...+. ...+.++.||+++|.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~---~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGE---VVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCC---EEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCe---EEEEEcCEEEECCCC
Confidence 5677778888888899999999999998642343 345544311110 135789999999984
No 385
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=81.55 E-value=1.1 Score=44.20 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=26.4
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..++|+|||+|.+|+.+|..|...+.+|+|
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v 306 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTL 306 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 456899999999999999999888888876
No 386
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=79.67 E-value=0.69 Score=44.58 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=29.4
Q ss_pred cccEEEEecCcchHHHHHHHHHCC--------CcEEEEeccC
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHG--------RKVIVLDYVI 136 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~--------~~~~~ve~~~ 136 (312)
..+++|||+|.+|+.+|..|.+.+ .+++++|...
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 358999999999999999998877 7789998754
No 387
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=79.04 E-value=1.8 Score=32.66 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=28.1
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
-.++|+|+|..|..++..+.+.+.++++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46899999999999999999989889888764
No 388
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=78.42 E-value=3 Score=37.45 Aligned_cols=52 Identities=8% Similarity=0.081 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+.+ ++|++++.|++++..+++ +.|.+.+| .++.+|.||++..+
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~~v~~~~g--------~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-YSLELDNG--------VTLDADSVIVTAPH 287 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEECSSS-EEEEESSS--------CEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-EEEEECCC--------CEEECCEEEECCCH
Confidence 455555555543 799999999999876544 56666555 46889999999885
No 389
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=78.30 E-value=1.5 Score=41.80 Aligned_cols=28 Identities=21% Similarity=0.109 Sum_probs=24.2
Q ss_pred CeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 284 GKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 284 ~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
-.|+|||+|.+|+.+|..|+. .+.+|.|
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~v 61 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCI 61 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEE
Confidence 469999999999999999998 6667765
No 390
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=78.00 E-value=4.2 Score=37.46 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhc-cceEEEeeceeeEEEEcCCCe-eEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 50 QQMAKLICEEMAE-GGVHFLHKCLPLSVTKLADGK-LKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 50 ~~~~~~~~~~l~~-~gi~~~~~~~v~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
..+.+.+.+.+++ .||+++.+ ++++++.++++. +.+.+.++ ..+.+|.||.+.|.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~AdG~ 231 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQN--------GEISGQLFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECSGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCC--------CEEEcCEEEECCCc
Confidence 4556677777777 89999999 599987654442 34555443 35889999999996
No 391
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=77.70 E-value=1.8 Score=39.57 Aligned_cols=53 Identities=13% Similarity=0.063 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecC
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGG 112 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G 112 (312)
...+.+.+.+.+.+.|+++++++.|+++..++ + .+++.+| .++.+|.||...-
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~--~v~~~~G--------~~~~ad~vI~t~P 273 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNANN-K--TVTLQDG--------TTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETTT-T--EEEETTS--------CEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEccC-C--EEEEcCC--------CEEECCEEEECCC
Confidence 45677888888999999999999999997543 3 5667666 5788998887655
No 392
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=77.69 E-value=2.3 Score=31.25 Aligned_cols=31 Identities=29% Similarity=0.611 Sum_probs=28.0
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
.++|+|+|..|..++..+.+.|.+++++|..
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 5899999999999999999999999998864
No 393
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=77.69 E-value=4.5 Score=38.26 Aligned_cols=60 Identities=10% Similarity=0.176 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
..+...+.+.+.+.||+++.++.+.++..+ ++.+ .+.+.+...++ ...+.++.||+++|.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~---~~~i~A~~VVlATGG 215 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGT---IHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCC---EEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCc---EEEEEcCeEEECCCc
Confidence 367777788888899999999999998764 3433 45443311111 135789999999984
No 394
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=77.48 E-value=2.1 Score=38.82 Aligned_cols=54 Identities=7% Similarity=0.132 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhcc--------ceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEG--------GVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~--------gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+.+. |.+|++++.|++++..+++ +.|.+.++ ..+.+|.||++.++
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~v~~~~g--------~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VTVKTEDN--------SVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EEEEETTS--------CEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-EEEEECCC--------CEEEcCEEEEecCH
Confidence 4555666666554 6789999999999875444 56666554 46789999999986
No 395
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=76.60 E-value=1.3 Score=35.88 Aligned_cols=23 Identities=26% Similarity=0.335 Sum_probs=21.2
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
..|+-+|..|++.|++|+|+|++
T Consensus 12 paGL~aA~~La~~G~~V~v~Ek~ 34 (336)
T 3kkj_A 12 IAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSS
T ss_pred HHHHHHHHHHHHCCCCEEEEECC
Confidence 47999999999999999999984
No 396
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=75.86 E-value=1.6 Score=42.52 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=25.1
Q ss_pred CCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+|+|||+|.+|+-+|..|...+.+|+|
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v 364 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTV 364 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 46799999999999999998887777775
No 397
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=75.75 E-value=1.9 Score=32.01 Aligned_cols=29 Identities=24% Similarity=0.140 Sum_probs=22.2
Q ss_pred CCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+++|+|||+|..|...+..|...+.+|++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v 49 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTV 49 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 77899999999999777776654444654
No 398
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=75.59 E-value=1.2 Score=42.97 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=24.0
Q ss_pred CCeEEEEcCchhhHHHHHHhhcCc--------eeeee
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNSGC--------GNVTI 311 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~~~--------~~V~~ 311 (312)
+++|+|||+|.+|+-+|..|...+ .+|+|
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v 92 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQI 92 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEE
Confidence 357999999999999999988766 66765
No 399
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=75.42 E-value=2.1 Score=39.32 Aligned_cols=42 Identities=10% Similarity=0.047 Sum_probs=32.4
Q ss_pred cceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 63 GGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 63 ~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.|+++++++.|++++..+++ +.|.+.++ ..+.+|.||++.++
T Consensus 225 lg~~i~~~~~V~~i~~~~~~-v~v~~~~g--------~~~~ad~VI~a~p~ 266 (520)
T 1s3e_A 225 LGDRVKLERPVIYIDQTREN-VLVETLNH--------EMYEAKYVISAIPP 266 (520)
T ss_dssp HGGGEESSCCEEEEECSSSS-EEEEETTS--------CEEEESEEEECSCG
T ss_pred cCCcEEcCCeeEEEEECCCe-EEEEECCC--------eEEEeCEEEECCCH
Confidence 37889999999999865443 55665554 46889999999996
No 400
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=74.55 E-value=2.9 Score=30.39 Aligned_cols=30 Identities=23% Similarity=0.498 Sum_probs=26.8
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEec
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDY 134 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~ 134 (312)
.++|+|+|..|..++..+.+.+.++++++.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 589999999999999999988888888875
No 401
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=74.32 E-value=8.5 Score=35.21 Aligned_cols=40 Identities=13% Similarity=0.204 Sum_probs=30.0
Q ss_pred hhhh-hhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEee
Q psy11185 21 SGLE-CAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHK 70 (312)
Q Consensus 21 ig~E-~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~ 70 (312)
+||- +|.+|.++|++|++.+... .+. .+.|++.||++..+
T Consensus 33 sG~s~~A~~l~~~G~~V~~~D~~~-----~~~-----~~~l~~~gi~~~~g 73 (494)
T 4hv4_A 33 AGMGGIAEVLANEGYQISGSDLAP-----NSV-----TQHLTALGAQIYFH 73 (494)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSC-----CHH-----HHHHHHTTCEEESS
T ss_pred hhHHHHHHHHHhCCCeEEEEECCC-----CHH-----HHHHHHCCCEEECC
Confidence 5785 7999999999999999632 111 34577789988765
No 402
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=73.99 E-value=6.3 Score=37.61 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCCee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
..+...+.+.+.+.||+|+.++.+.++..+ ++.+ .+...+...+. ...+.++.||+++|.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~---~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGD---IIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCC---EEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCc---EEEEEcCEEEEccCc
Confidence 467777778888889999999999998753 3332 34443211110 124789999999984
No 403
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=73.65 E-value=3.1 Score=31.13 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=27.9
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
.++|+|+|..|..++..|.+.+.++++++..
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5899999999999999999989999988864
No 404
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=73.22 E-value=5.9 Score=36.61 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=29.9
Q ss_pred hhhh-hhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEee
Q psy11185 21 SGLE-CAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHK 70 (312)
Q Consensus 21 ig~E-~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~ 70 (312)
+||- +|.+|.++|++|++.+.... ++ ..+.|++.||++..+
T Consensus 30 ~Gms~lA~~l~~~G~~V~~sD~~~~----~~-----~~~~L~~~gi~~~~G 71 (524)
T 3hn7_A 30 TFMGSLALLARALGHTVTGSDANIY----PP-----MSTQLEQAGVTIEEG 71 (524)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCC----TT-----HHHHHHHTTCEEEES
T ss_pred hhHHHHHHHHHhCCCEEEEECCCCC----cH-----HHHHHHHCCCEEECC
Confidence 6786 58899999999999997421 11 145667789988755
No 405
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=72.31 E-value=5.3 Score=36.61 Aligned_cols=61 Identities=10% Similarity=-0.079 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhccceEEEeeceeeEEEEcCCC-------eeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 50 QQMAKLICEEMAEGGVHFLHKCLPLSVTKLADG-------KLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 50 ~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.++.+|+...-++.+..++++++|++++....+ ...|...++.++.. .++.++.||+|.|.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~---~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEI---SARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCE---EEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceE---EEEEeCEEEECcCC
Confidence 467888887777777778889999998754321 24666666543322 46789999999993
No 406
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=71.89 E-value=2.9 Score=32.37 Aligned_cols=30 Identities=17% Similarity=0.074 Sum_probs=23.6
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcC-ceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSG-CGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~-~~~V~~ 311 (312)
.+++|+|+|.|.+|...+..|... +.+|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~v 68 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLG 68 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEE
Confidence 356899999999999888888765 556654
No 407
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=71.51 E-value=4.1 Score=33.74 Aligned_cols=47 Identities=19% Similarity=0.063 Sum_probs=33.0
Q ss_pred CCcchhh--------hhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEE
Q psy11185 14 NLKDKVD--------SGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHF 67 (312)
Q Consensus 14 ~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~ 67 (312)
+||+||. ||.++|..|++.|.+|.+++|+ ++-.+.+.+.+++.|.++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~-------~~~~~~~~~~i~~~g~~~ 58 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL-------EDRLNQIVQELRGMGKEV 58 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-------HHHHHHHHHHHHHTTCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-------HHHHHHHHHHHHhcCCcE
Confidence 4666665 8999999999999999999973 122234455566666443
No 408
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=71.23 E-value=2.5 Score=40.03 Aligned_cols=27 Identities=22% Similarity=0.291 Sum_probs=24.0
Q ss_pred eEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 285 KTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 285 ~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.|+|||+|..|+.+|..|...+.+|.|
T Consensus 48 dvvIIG~G~aGl~aA~~l~~~G~~V~l 74 (623)
T 3pl8_A 48 DVVIVGSGPIGCTYARELVGAGYKVAM 74 (623)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECCcHHHHHHHHHHHhCCCcEEE
Confidence 699999999999999999887777765
No 409
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.24 E-value=3.4 Score=31.94 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=28.1
Q ss_pred ccEEEEecCcchHHHHHHHHHC-CCcEEEEecc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAH-GRKVIVLDYV 135 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~-~~~~~~ve~~ 135 (312)
-.++|+|.|..|..++..|.+. +.+++++|..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 3689999999999999999988 8899888863
No 410
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=66.68 E-value=5.2 Score=33.17 Aligned_cols=47 Identities=15% Similarity=0.127 Sum_probs=32.9
Q ss_pred CCcchhh--------hhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEE
Q psy11185 14 NLKDKVD--------SGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHF 67 (312)
Q Consensus 14 ~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~ 67 (312)
||+.||. ||.++|..|++.|.+|.+.+|+. +-.+.+.+.+++.|.++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~-------~~~~~~~~~l~~~g~~~ 60 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRA-------TLLAESVDTLTRKGYDA 60 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH-------HHHHHHHHHHHHTTCCE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-------HHHHHHHHHHHhcCCcE
Confidence 5677765 89999999999999999998731 12233345556666443
No 411
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=66.16 E-value=5 Score=29.18 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=26.5
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEec
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDY 134 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~ 134 (312)
.++|+|+|..|..++..+.+.+.++++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 589999999999999999988888888775
No 412
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.92 E-value=5.1 Score=27.96 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=26.0
Q ss_pred ccEEEEecCcchHHHHHHHHHCC-CcEEEEec
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHG-RKVIVLDY 134 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~-~~~~~ve~ 134 (312)
..++|+|+|..|..++..+.+.+ .++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 36899999999999999999888 67777765
No 413
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=65.85 E-value=5.9 Score=36.74 Aligned_cols=56 Identities=9% Similarity=0.084 Sum_probs=36.3
Q ss_pred HHHHHHhc-cceEEEeeceeeEEEEcCCC------ee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 55 LICEEMAE-GGVHFLHKCLPLSVTKLADG------KL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 55 ~~~~~l~~-~gi~~~~~~~v~~~~~~~~~------~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+++ .||+++.++.++++..+.++ .+ .+.+.+...++ ...+.++.||+++|.
T Consensus 143 ~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~---~~~i~A~~VVlAtGg 206 (540)
T 1chu_A 143 TLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKET---VETCHAKAVVLATGG 206 (540)
T ss_dssp CCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTE---EEEEECSEEEECCCC
T ss_pred HHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCc---EEEEEcCeEEECCCC
Confidence 34455666 79999999999999863222 33 45554311111 136789999999994
No 414
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.30 E-value=4.6 Score=32.24 Aligned_cols=32 Identities=13% Similarity=0.306 Sum_probs=28.1
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+|+|..|..++..|.+.+.+++++|...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 47999999999999999999999999998643
No 415
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=64.94 E-value=3.9 Score=30.70 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=25.4
Q ss_pred cccccCCCCCCcchhh------hhhhhhHhhhccCCeEEEEEcc
Q psy11185 5 NHKEHAPKGNLKDKVD------SGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 5 ~~~~~~~~~~~~~~~~------ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
.|..|.|+....++|- +|..+|..|.+.|.+|++++++
T Consensus 8 ~~~~~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 8 HHHHHMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ---------CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hhhhhhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3566788888777664 7999999999999999999984
No 416
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=64.82 E-value=5 Score=33.69 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=28.7
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
..++|||+|..|...+..|.+.|.++++++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46899999999999999999999999998864
No 417
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=63.64 E-value=6.1 Score=35.60 Aligned_cols=52 Identities=8% Similarity=0.061 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEE---eeccccccCCCccccccEEEEecCcc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQY---KNVAEVRQDNTHKYDYDLLVLGGGSG 114 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~---~~~~~~~~~~~~~~~~d~vivg~G~~ 114 (312)
.+.+.+.+.+ |.+|++++.|++++..+++ +.|.+ .++ ..+.+|.||+++++.
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~~v~~~~~~~g--------~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGG-WRLIIEEHGRR--------AELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--C-CEEEEEETTEE--------EEEECSEEEECSCHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCe-EEEEEeecCCC--------ceEEcCEEEECCCHH
Confidence 3445455544 5689999999999865443 66766 333 457899999999863
No 418
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=63.62 E-value=5.2 Score=35.31 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=23.3
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+.+|+|+|+|..|..++..+...+.+|++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v 212 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTG 212 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999777776655556764
No 419
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=63.51 E-value=5.9 Score=34.02 Aligned_cols=32 Identities=16% Similarity=0.008 Sum_probs=24.1
Q ss_pred CCCCCeEEEEcCchh-hHHHHHHhhcCceeeee
Q psy11185 280 EKPPGKTLVVGAGYI-GKLETWDSNSGCGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~s-a~~~a~~l~~~~~~V~~ 311 (312)
...+++++|||+|.+ |.-+|..|...+..|++
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv 206 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYS 206 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEE
Confidence 346788999999975 88777776666567875
No 420
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=63.13 E-value=6.3 Score=32.97 Aligned_cols=29 Identities=21% Similarity=0.210 Sum_probs=23.1
Q ss_pred CCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
+++++|+|+|-.|.-++..|...+.+|++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V 146 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSV 146 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 67899999999998766666655577776
No 421
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=62.69 E-value=5.1 Score=32.97 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=23.4
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcC-ceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSG-CGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~-~~~V~~ 311 (312)
..++|+|||.|..|..++..|... ..++++
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~l 60 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTL 60 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEE
Confidence 357899999999999888887654 346665
No 422
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=62.67 E-value=6.4 Score=35.03 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=23.5
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+.+|+|+|+|..|..++..+...+.+|++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v 218 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSA 218 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999777776665557764
No 423
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=62.33 E-value=6.7 Score=32.66 Aligned_cols=31 Identities=29% Similarity=0.188 Sum_probs=23.7
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++++|+|+|..|.-++..|...+.+|++
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v 147 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDCAVTI 147 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCEEEE
Confidence 3467899999999998777776655567765
No 424
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=61.85 E-value=6.3 Score=31.95 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=28.0
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEec
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDY 134 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~ 134 (312)
-.++|||+|..|...+..|.+.|.++++++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 4789999999999999999999999999875
No 425
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=61.54 E-value=6.9 Score=34.83 Aligned_cols=33 Identities=30% Similarity=0.398 Sum_probs=29.5
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
...++|+|+|+.|+.++..+...|.+++++|..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 568999999999999999999999998888864
No 426
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=61.05 E-value=7.5 Score=32.77 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=25.2
Q ss_pred CCCCCeEEEEcCch-hhHHHHHHhhcCceeeee
Q psy11185 280 EKPPGKTLVVGAGY-IGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~-sa~~~a~~l~~~~~~V~~ 311 (312)
...+++++|||.|. .|.-.+..|...+..||+
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv 188 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTV 188 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEE
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEE
Confidence 45678899999997 599777777776678876
No 427
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=60.77 E-value=7.1 Score=34.71 Aligned_cols=30 Identities=37% Similarity=0.458 Sum_probs=22.8
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|+|+|.+|..++..+...+.+|++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v 200 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRA 200 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999777776555446654
No 428
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=60.64 E-value=5.4 Score=36.57 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=32.3
Q ss_pred eEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCcchH
Q psy11185 65 VHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGSGGL 116 (312)
Q Consensus 65 i~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~~gl 116 (312)
.+|++++.|++|....++.+.|.+.++ ..+.+|.||++.++.-+
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g--------~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDG--------TVYNADYVIITVPQSVL 258 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTS--------CEEEEEEEEECCCHHHH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCC--------cEEECCEEEECCCHHHh
Confidence 468999999999864334466666554 46789999999986433
No 429
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=60.15 E-value=7.5 Score=33.94 Aligned_cols=30 Identities=27% Similarity=0.431 Sum_probs=22.7
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|+|+|..|..++..+...+.+|++
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v 195 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQI 195 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 357899999999999777766655447764
No 430
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=59.67 E-value=7.8 Score=34.61 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=23.6
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVT 310 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~ 310 (312)
..+++|+|+|+|.+|...+..+...+-+|.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~ 62 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVA 62 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEE
Confidence 456789999999999988777776665554
No 431
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=59.45 E-value=8.2 Score=34.08 Aligned_cols=42 Identities=12% Similarity=-0.015 Sum_probs=30.3
Q ss_pred ccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 62 EGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 62 ~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
..+.++++++.|++++..+++ +.|.+.++ ++.+|.||+++++
T Consensus 215 ~l~~~v~~~~~V~~i~~~~~~-v~v~~~~g---------~~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 215 TLEHPAERNVDITRITREDGK-VHIHTTDW---------DRESDVLVLTVPL 256 (424)
T ss_dssp HSSSCCBCSCCEEEEECCTTC-EEEEESSC---------EEEESEEEECSCH
T ss_pred hhcceEEcCCEEEEEEEECCE-EEEEECCC---------eEEcCEEEECCCH
Confidence 334578999999999865433 55555433 3789999999996
No 432
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=59.14 E-value=7.9 Score=34.12 Aligned_cols=30 Identities=27% Similarity=0.352 Sum_probs=22.7
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|+|+|.+|..++..+...+.+|++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~ 200 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMA 200 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999777666554445654
No 433
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=58.85 E-value=8.1 Score=33.82 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=23.3
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|+|+|.+|..++..+...+.+|++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~ 194 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTI 194 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 357899999999999777776665557754
No 434
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=58.54 E-value=16 Score=34.61 Aligned_cols=56 Identities=9% Similarity=0.032 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHhccceEEEeeceeeEEEEcCC-Cee-EEEEeeccccccCCCccccccEEEEecC
Q psy11185 49 DQQMAKLICEEMAEGGVHFLHKCLPLSVTKLAD-GKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGG 112 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~-~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G 112 (312)
..++.+.+.+.+...|.++++++.|.+|..+++ +++ .+...+| +.+.+|.||....
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~G--------e~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFG--------QRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTS--------CEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCC--------CEEEcCEEEEChh
Confidence 456777888889999999999999999876542 433 3333334 5688999888555
No 435
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=58.48 E-value=5.7 Score=35.51 Aligned_cols=43 Identities=9% Similarity=-0.024 Sum_probs=30.6
Q ss_pred ccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 62 EGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 62 ~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
+.|+++++++.|+++...+++.+.|.. ++ ..+.+|.||++.++
T Consensus 224 ~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~--------~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 224 ALGDDVFLNAPVRTVKWNESGATVLAD-GD--------IRVEASRVILAVPP 266 (453)
T ss_dssp HHGGGEECSCCEEEEEEETTEEEEEET-TT--------EEEEEEEEEECSCG
T ss_pred hcCCcEEcCCceEEEEEeCCceEEEEE-CC--------eEEEcCEEEEcCCH
Confidence 347899999999999864332134432 22 46789999999996
No 436
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=57.75 E-value=8.6 Score=33.79 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=22.9
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|+|+|.+|..++..+...+.+|++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~ 196 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTV 196 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 467899999999999777776655546654
No 437
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=57.28 E-value=11 Score=31.55 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=24.7
Q ss_pred CCCCCeEEEEcCchh-hHHHHHHhhcC--ceeeee
Q psy11185 280 EKPPGKTLVVGAGYI-GKLETWDSNSG--CGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~s-a~~~a~~l~~~--~~~V~~ 311 (312)
...+++++|||.|.+ |.-.+..|... +..||+
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv 189 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTL 189 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 456789999999975 98777776665 667876
No 438
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=56.90 E-value=8.9 Score=33.58 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=24.6
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++|+|+|.|..|..++..|...+.+|.+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv 201 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVV 201 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEE
Confidence 4567899999999999877777666666655
No 439
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=56.74 E-value=11 Score=32.08 Aligned_cols=32 Identities=19% Similarity=0.015 Sum_probs=24.6
Q ss_pred CCCCCeEEEEcCch-hhHHHHHHhhcCceeeee
Q psy11185 280 EKPPGKTLVVGAGY-IGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~-sa~~~a~~l~~~~~~V~~ 311 (312)
...+++++|||.|. .|.-++..|...+..||+
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv 194 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTT 194 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEE
Confidence 45678999999996 699777776666667876
No 440
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=56.41 E-value=10 Score=34.11 Aligned_cols=51 Identities=8% Similarity=0.040 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+.+ .+|++++.|++|+..+++ +.|...+| ++.+|.||++.++
T Consensus 237 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~~v~~~~g---------~~~ad~vV~a~p~ 287 (475)
T 3lov_A 237 SLIERLEEVLER--SEIRLETPLLAISREDGR-YRLKTDHG---------PEYADYVLLTIPH 287 (475)
T ss_dssp HHHHHHHHHCSS--CEEESSCCCCEEEEETTE-EEEECTTC---------CEEESEEEECSCH
T ss_pred HHHHHHHhhccC--CEEEcCCeeeEEEEeCCE-EEEEECCC---------eEECCEEEECCCH
Confidence 344555555543 699999999999875443 44544332 5789999999885
No 441
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=56.31 E-value=10 Score=34.22 Aligned_cols=32 Identities=41% Similarity=0.318 Sum_probs=28.8
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
..+.|||.|.+|+++|..|.+.|..|...|..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46899999999999999999999999998864
No 442
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=56.29 E-value=11 Score=31.90 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=23.1
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCc-eeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGC-GNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~-~~V~~ 311 (312)
..+++++|+|+|..|.-++..|...+ .+|++
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v 170 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDM 170 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEE
Confidence 34678999999999987666665554 47765
No 443
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=56.13 E-value=13 Score=30.98 Aligned_cols=31 Identities=23% Similarity=0.496 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCchhhHHHHHHh-hcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDS-NSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l-~~~~~~V~~ 311 (312)
..+++++|+|+|-.|.-++..| ..++++|+|
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i 154 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITL 154 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEE
Confidence 4567899999999998555554 566677776
No 444
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=55.79 E-value=13 Score=27.76 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=18.3
Q ss_pred cchhhhhhhhhHhhhcc-CCeEEEEEc
Q psy11185 16 KDKVDSGLECAGFLNGL-GFNATVMIR 41 (312)
Q Consensus 16 ~~~~~ig~E~A~~l~~~-g~~vtl~~~ 41 (312)
...-.-++++|..+++. +.+++++.-
T Consensus 35 s~~s~~al~~A~~la~~~~a~l~llhV 61 (155)
T 3dlo_A 35 SDRAERVLRFAAEEARLRGVPVYVVHS 61 (155)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 44455677777777664 889999885
No 445
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=55.57 E-value=7 Score=32.57 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=22.8
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++++|+|+|..|.-++..|...+.+|++
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v 147 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQNIVL 147 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTCEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 3467899999999998666665555467775
No 446
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=55.00 E-value=8.4 Score=34.08 Aligned_cols=34 Identities=38% Similarity=0.602 Sum_probs=29.7
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCC-cEEEEecc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYV 135 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~ 135 (312)
-+..+||+|+|.+|+.++..+...|. +++++|..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 35789999999999999999988888 78888874
No 447
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=54.96 E-value=13 Score=31.06 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=23.7
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++++|+|+|..|...+..|...+ +|++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v 155 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIII 155 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEE
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEE
Confidence 4678999999988888888877777 7775
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=54.91 E-value=11 Score=31.83 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=23.2
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++|+|||.|.+|...+..+...+.+|++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~ 183 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKV 183 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEE
Confidence 467899999999999777776655546654
No 449
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=54.80 E-value=11 Score=31.60 Aligned_cols=31 Identities=16% Similarity=0.094 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCc-eeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGC-GNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~-~~V~~ 311 (312)
..+++++|+|+|-.|.-++..|...+ .+|++
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i 149 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVI 149 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEE
Confidence 35678999999988886666655544 57775
No 450
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=54.80 E-value=10 Score=31.98 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=23.2
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
.+++++|||.|.+|...+..+...+.+|++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~ 185 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKV 185 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEE
Confidence 567899999999999777776655556654
No 451
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=54.48 E-value=12 Score=31.94 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=22.6
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
..+++++|+|+|-.|.-++..|.. ++++|++
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i 183 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISI 183 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEE
Confidence 456789999999888866666554 4457775
No 452
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=54.39 E-value=16 Score=34.56 Aligned_cols=58 Identities=14% Similarity=0.189 Sum_probs=36.2
Q ss_pred HHHHHHHHhcc-ce-EEEeeceeeEEEEcCC--Cee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 53 AKLICEEMAEG-GV-HFLHKCLPLSVTKLAD--GKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 53 ~~~~~~~l~~~-gi-~~~~~~~v~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
...+.+.+++. || +++.++.+.++..+++ +.+ .+...+..++. ...+.++.||+++|.
T Consensus 154 ~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~---~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 154 KPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPK---FYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSC---EEEEECSEEEECCCC
T ss_pred HHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCc---EEEEEcCEEEECCCc
Confidence 34555566666 99 9999999999876544 133 34432211110 125789999998884
No 453
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=54.36 E-value=7.5 Score=36.69 Aligned_cols=37 Identities=19% Similarity=0.075 Sum_probs=25.1
Q ss_pred cccccCCCCCCcchhh--------hhhhhhHhhhccCCeEEEEEc
Q psy11185 5 NHKEHAPKGNLKDKVD--------SGLECAGFLNGLGFNATVMIR 41 (312)
Q Consensus 5 ~~~~~~~~~~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~ 41 (312)
+|..+-|+.+|++++. ||.++|..|++.|.+|.+++|
T Consensus 7 ~~~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r 51 (613)
T 3oml_A 7 HMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDL 51 (613)
T ss_dssp --------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--
T ss_pred cccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4455667788888876 899999999999999999987
No 454
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=54.34 E-value=14 Score=30.93 Aligned_cols=31 Identities=16% Similarity=0.098 Sum_probs=23.0
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCc-eeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGC-GNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~-~~V~~ 311 (312)
..+++++|+|+|..|.-++..|...+ .+|++
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v 155 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITV 155 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEE
Confidence 35678999999998886666665554 57775
No 455
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=54.00 E-value=13 Score=33.58 Aligned_cols=55 Identities=7% Similarity=0.082 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccccccEEEEecCc
Q psy11185 51 QMAKLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 51 ~~~~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
.+.+.+.+.+.+ .++++++.|++|+..++ .+.|.+.++... ..+.+|.||++..+
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~-----~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSE-GVTVEYTAGGSK-----KSITADYAICTIPP 294 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETT-EEEEEEEETTEE-----EEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCC-eEEEEEecCCeE-----EEEECCEEEECCCH
Confidence 455555665543 57899999999987544 466666654210 35789999999985
No 456
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=53.94 E-value=11 Score=33.69 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=28.4
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
.++|+|.|+.|..++..|.+.+.+++++|..
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5899999999999999999999999999865
No 457
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=53.70 E-value=8.5 Score=33.93 Aligned_cols=33 Identities=36% Similarity=0.352 Sum_probs=29.2
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
...++|+|+|..|+.++..+...|.+++++|..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999889888888864
No 458
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=53.55 E-value=12 Score=32.33 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=23.3
Q ss_pred CCCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
...+|+|||.|-.|..++.+|.. |..++++
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~Itl 63 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITF 63 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 46789999999999988877554 5556665
No 459
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=53.46 E-value=12 Score=35.64 Aligned_cols=59 Identities=8% Similarity=0.166 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcc--ceEEEeeceeeEEEEcCC--Cee-EEEEeeccccccCCCccccccEEEEecCc
Q psy11185 52 MAKLICEEMAEG--GVHFLHKCLPLSVTKLAD--GKL-KVQYKNVAEVRQDNTHKYDYDLLVLGGGS 113 (312)
Q Consensus 52 ~~~~~~~~l~~~--gi~~~~~~~v~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~d~vivg~G~ 113 (312)
+...+.+.+++. ||+++.++.+..+..+.+ +.+ .+...+..++. ...+.++.||+++|-
T Consensus 168 i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~---~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 168 YKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANE---VHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSC---EEEEECSEEEECCCC
T ss_pred HHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCc---EEEEEeCEEEECCCc
Confidence 344556666666 999999999998876544 233 44433311111 135789999999984
No 460
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=53.18 E-value=14 Score=31.63 Aligned_cols=31 Identities=13% Similarity=0.173 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCchhhHHHHHHhh-cCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSN-SGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~-~~~~~V~~ 311 (312)
..+++++|+|+|-.|.-++..|. .++++|+|
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v 177 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKL 177 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEE
Confidence 45678999999999886666554 45557776
No 461
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=53.02 E-value=12 Score=31.45 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=22.4
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
..+++++|+|+|-.|.-++..|.. ++++|++
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i 156 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQV 156 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 356789999999998866666544 4446775
No 462
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=52.82 E-value=15 Score=33.82 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=36.2
Q ss_pred HHHHHHHhccceEEEeeceeeEEEEcCCCeeEEEEeeccccccCCCccc---cccEEEEecCc
Q psy11185 54 KLICEEMAEGGVHFLHKCLPLSVTKLADGKLKVQYKNVAEVRQDNTHKY---DYDLLVLGGGS 113 (312)
Q Consensus 54 ~~~~~~l~~~gi~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~d~vivg~G~ 113 (312)
.++....++.++++++++.|+++..+++....|.+.+...++. ..+ .++.||+++|.
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~---~~~~v~~~~~VIlaaG~ 259 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPN---GFIPVTPKGRVILSAGA 259 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGG---GEEEEEEEEEEEECSHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCce---eEEEEEeCCEEEEcCCh
Confidence 3555555557999999999999986433223566654211110 122 67899999996
No 463
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=52.37 E-value=5.9 Score=35.98 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=28.4
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+|+|..|..+|..|...+.+++++|...
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 48999999999999999988888999999653
No 464
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=52.02 E-value=11 Score=32.31 Aligned_cols=30 Identities=33% Similarity=0.409 Sum_probs=27.7
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEec
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDY 134 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~ 134 (312)
.+.|||+|..|...|..++..|.+|+++|.
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 689999999999999999999999999985
No 465
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=51.97 E-value=10 Score=31.72 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=22.2
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCc-eeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGC-GNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~-~~V~~ 311 (312)
.+++++|+|+|..|.-++..|...+ ++|++
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 4678999999999886666655544 47765
No 466
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=51.78 E-value=13 Score=31.18 Aligned_cols=31 Identities=10% Similarity=0.044 Sum_probs=22.5
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
..+++++|+|+|-.|.-++..|.. ++++|++
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v 151 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYV 151 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEE
Confidence 356789999999888866665544 4457775
No 467
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=51.63 E-value=7.3 Score=35.00 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=30.9
Q ss_pred hhhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEEEeec
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHFLHKC 71 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~~~~~ 71 (312)
.+||.+|.+|.++|++|++++.+...+.. ..|+ .|+++.++.
T Consensus 15 ~~G~~~a~~l~~~G~~v~~~D~~~~~~~~---------~~l~-~G~~~~~g~ 56 (439)
T 2x5o_A 15 LTGLSCVDFFLARGVTPRVMDTRMTPPGL---------DKLP-EAVERHTGS 56 (439)
T ss_dssp HHHHHHHHHHHTTTCCCEEEESSSSCTTG---------GGSC-TTSCEEESS
T ss_pred HHHHHHHHHHHhCCCEEEEEECCCCcchh---------HHhh-CCCEEEECC
Confidence 48999999999999999999974332221 3355 688887664
No 468
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=51.56 E-value=32 Score=28.11 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=29.6
Q ss_pred hhhhhhHhhhccCCeEEEEEccCCCccchHHHHHHHHHHHhccceEE
Q psy11185 21 SGLECAGFLNGLGFNATVMIRSVPLRGFDQQMAKLICEEMAEGGVHF 67 (312)
Q Consensus 21 ig~E~A~~l~~~g~~vtl~~~~~~l~~~~~~~~~~~~~~l~~~gi~~ 67 (312)
||.++|..|++.|.+|.++.|.. .+.+-.+.+.+.+++.|.++
T Consensus 23 IG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~ 65 (262)
T 3ksu_A 23 LGALTAKTFALESVNLVLHYHQA----KDSDTANKLKDELEDQGAKV 65 (262)
T ss_dssp HHHHHHHHHTTSSCEEEEEESCG----GGHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHCCCEEEEEecCc----cCHHHHHHHHHHHHhcCCcE
Confidence 89999999999999999998731 12333344455566555443
No 469
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=50.56 E-value=13 Score=33.07 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=28.5
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
...++|+|+|..|+.++..+...|.+++++|..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 457899999999999999999889888888753
No 470
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=50.38 E-value=13 Score=30.95 Aligned_cols=30 Identities=37% Similarity=0.420 Sum_probs=27.0
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEec
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDY 134 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~ 134 (312)
.+.|||+|..|..+|..+...|.+++++|.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 589999999999999999999999888875
No 471
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=50.33 E-value=23 Score=29.08 Aligned_cols=32 Identities=25% Similarity=0.190 Sum_probs=25.6
Q ss_pred CCCCCcchhh--------hhhhhhHhhhccCCeEEEEEcc
Q psy11185 11 PKGNLKDKVD--------SGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 11 ~~~~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
+..+|++++. ||.++|..|++.|++|.++.|+
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 3456666654 8999999999999999999985
No 472
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=50.33 E-value=13 Score=32.39 Aligned_cols=31 Identities=16% Similarity=0.092 Sum_probs=24.3
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++|+|+|.|.+|..++..+...+.+|.+
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvv 203 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLV 203 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 4567899999999999877776666656654
No 473
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=50.17 E-value=14 Score=34.23 Aligned_cols=57 Identities=19% Similarity=0.107 Sum_probs=37.3
Q ss_pred HHHHHHHhccceEEEeeceeeEEEEcCCC-eeEEEEeeccccccCCCcccccc-EEEEecCc
Q psy11185 54 KLICEEMAEGGVHFLHKCLPLSVTKLADG-KLKVQYKNVAEVRQDNTHKYDYD-LLVLGGGS 113 (312)
Q Consensus 54 ~~~~~~l~~~gi~~~~~~~v~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d-~vivg~G~ 113 (312)
.++...+++.|++|++++.|+++..++++ ...|.+.+..+++ ...+.++ .||+++|.
T Consensus 213 a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~---~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 213 SYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGH---THRLTARNEVVLSTGA 271 (546)
T ss_dssp HHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSC---EEEEEEEEEEEECSHH
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCc---EEEEEeCccEEEecCc
Confidence 34444445689999999999999865423 2356664421111 1357788 99999996
No 474
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=49.84 E-value=16 Score=28.92 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=28.4
Q ss_pred ccEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 104 YDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 104 ~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
..+.|||+|..|..++..+.+.+.++.+++...
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 368999999999999999999898888887643
No 475
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=49.71 E-value=22 Score=29.29 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=24.9
Q ss_pred ccCCCCCCcchhh--------hhhhhhHhhhccCCeEEEEEc
Q psy11185 8 EHAPKGNLKDKVD--------SGLECAGFLNGLGFNATVMIR 41 (312)
Q Consensus 8 ~~~~~~~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~ 41 (312)
.|.+.-+|++++. ||.++|..|++.|.+|.+..+
T Consensus 19 ~~m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 19 SHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp -----CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4445556766654 899999999999999999887
No 476
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=49.57 E-value=14 Score=31.13 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=27.0
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEec
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDY 134 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~ 134 (312)
.+.|||+|..|..+|..+...|.+++++|.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 489999999999999999998988988875
No 477
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=49.32 E-value=14 Score=33.48 Aligned_cols=29 Identities=17% Similarity=0.048 Sum_probs=23.1
Q ss_pred CCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
-++|.|||+|..|.-.|..+...+..|++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l 65 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVA 65 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 35799999999999777777666667765
No 478
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=49.01 E-value=12 Score=33.02 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=29.4
Q ss_pred ccccEEEEecCcchHHHHHHHHHCCC-cEEEEecc
Q psy11185 102 YDYDLLVLGGGSGGLAAAKEAAAHGR-KVIVLDYV 135 (312)
Q Consensus 102 ~~~d~vivg~G~~gl~~a~~~~~~~~-~~~~ve~~ 135 (312)
-+..+||+|+|.+|..++..+...|. +++++|..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35789999999999999999988887 68888864
No 479
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=48.84 E-value=20 Score=30.97 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=28.1
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|+|+|..|..++..+.+.|.+++++|.+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47899999999999999999999999998654
No 480
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=48.69 E-value=13 Score=30.95 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=21.8
Q ss_pred CCCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
..++++|+|+|-.|.-++..|.. +..+|+|
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v 148 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKI 148 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 35689999999999866655544 4457776
No 481
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=48.52 E-value=9.4 Score=34.26 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=28.3
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.++|||.|.+|++++..+.+.|..+...|...
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 58999999999999999999999998888643
No 482
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=48.49 E-value=16 Score=32.18 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=28.3
Q ss_pred cccEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 103 DYDLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 103 ~~d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
...++|+|+|+.|+.++..+...|.+++++|..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999999999889888887753
No 483
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=48.38 E-value=16 Score=30.17 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=27.5
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEeccC
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYVI 136 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~~ 136 (312)
.+.|||+|..|..++..+.+.+.++.+++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 37899999999999999999898888887643
No 484
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=47.96 E-value=9.5 Score=35.77 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=45.5
Q ss_pred HHHHHHHHhccceEEEeeceeeEEEEcC---CCe-eEEEEeeccccccCCCcccccc-EEEEecCc---------chHHH
Q psy11185 53 AKLICEEMAEGGVHFLHKCLPLSVTKLA---DGK-LKVQYKNVAEVRQDNTHKYDYD-LLVLGGGS---------GGLAA 118 (312)
Q Consensus 53 ~~~~~~~l~~~gi~~~~~~~v~~~~~~~---~~~-~~v~~~~~~~~~~~~~~~~~~d-~vivg~G~---------~gl~~ 118 (312)
..++...+++.+++|++++.|+++.-+. +++ ..|.+.+... + ..++.++ .||+++|. +|+.-
T Consensus 230 ~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G-~---~~~v~A~kEVILsAGa~~SPqLL~lSGIGp 305 (583)
T 3qvp_A 230 REWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKG-N---THNVYAKHEVLLAAGSAVSPTILEYSGIGM 305 (583)
T ss_dssp HHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTT-C---EEEEEEEEEEEECSCTTTHHHHHHHTTBSC
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCC-c---EEEEEECCEEEEeCCccCCHHHHHHcCCCC
Confidence 3455556667899999999999987542 232 3566652111 0 1345665 79999995 55555
Q ss_pred HHHHHHCCCcE
Q psy11185 119 AKEAAAHGRKV 129 (312)
Q Consensus 119 a~~~~~~~~~~ 129 (312)
+..|.+.|..+
T Consensus 306 ~~~L~~~GI~v 316 (583)
T 3qvp_A 306 KSILEPLGIDT 316 (583)
T ss_dssp HHHHGGGTCCC
T ss_pred HHHHHhCCCCc
Confidence 55666665543
No 485
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=47.51 E-value=13 Score=32.92 Aligned_cols=30 Identities=30% Similarity=0.276 Sum_probs=22.3
Q ss_pred CCCeEEEEcCchhhHHHHHHhhcCc-eeeee
Q psy11185 282 PPGKTLVVGAGYIGKLETWDSNSGC-GNVTI 311 (312)
Q Consensus 282 ~~~~v~VvG~G~sa~~~a~~l~~~~-~~V~~ 311 (312)
.+++|+|||+|.+|..++..+...+ .+|++
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v 196 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLV 196 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEE
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEE
Confidence 5678999999999997766665443 36664
No 486
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=47.35 E-value=22 Score=29.17 Aligned_cols=29 Identities=21% Similarity=0.162 Sum_probs=25.6
Q ss_pred CCcchhh--------hhhhhhHhhhccCCeEEEEEcc
Q psy11185 14 NLKDKVD--------SGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 14 ~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
+|+.||. ||..+|..|++.|.+|.+.+|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~ 42 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARR 42 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5777775 8999999999999999999984
No 487
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=47.12 E-value=15 Score=33.48 Aligned_cols=31 Identities=19% Similarity=0.155 Sum_probs=24.7
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++++|+|+|.+|..++..|...+.+|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv 293 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIV 293 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 4577899999999999777777766667764
No 488
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=46.99 E-value=45 Score=27.03 Aligned_cols=23 Identities=13% Similarity=0.185 Sum_probs=21.4
Q ss_pred hhhhhhhHhhhccCCeEEEEEcc
Q psy11185 20 DSGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 20 ~ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
-+|..+|..|.++|++|+++.|+
T Consensus 30 ~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 30 HLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC
Confidence 48999999999999999999984
No 489
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=46.82 E-value=12 Score=31.03 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=25.4
Q ss_pred CCcchhh--------hhhhhhHhhhccCCeEEEEEcc
Q psy11185 14 NLKDKVD--------SGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 14 ~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
||++||. ||.++|..|++.|.+|.+..|+
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 5677665 8999999999999999999984
No 490
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=46.65 E-value=16 Score=33.43 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=24.1
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++|+|+|.|.+|..++..+...+.+|.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv 302 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSV 302 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEE
Confidence 4567899999999999877777665556654
No 491
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=46.64 E-value=16 Score=32.76 Aligned_cols=31 Identities=19% Similarity=0.056 Sum_probs=24.4
Q ss_pred CCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
..+++|+|+|.|.+|..++..+...+.+|.+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv 248 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYV 248 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEE
Confidence 4567899999999999877777666556654
No 492
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=46.57 E-value=16 Score=31.70 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=22.7
Q ss_pred CCeEEEEcCchhhHHHHHHhhc-Cceeeee
Q psy11185 283 PGKTLVVGAGYIGKLETWDSNS-GCGNVTI 311 (312)
Q Consensus 283 ~~~v~VvG~G~sa~~~a~~l~~-~~~~V~~ 311 (312)
..+|+|||.|..|.+++.+|.. |..+++|
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itl 65 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTM 65 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 5689999999999988888654 4446665
No 493
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=46.57 E-value=16 Score=30.74 Aligned_cols=32 Identities=25% Similarity=0.190 Sum_probs=23.5
Q ss_pred CCCCCeEEEEcCch-hhHHHHHHhhcCceeeee
Q psy11185 280 EKPPGKTLVVGAGY-IGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~-sa~~~a~~l~~~~~~V~~ 311 (312)
...+++++|||.|. .|.-++..|...+..|++
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv 190 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTT 190 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEE
Confidence 35678899999776 698777666655557775
No 494
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=46.33 E-value=16 Score=30.52 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=22.9
Q ss_pred CCCCeEEEEcCch-hhHHHHHHhhcCceeeee
Q psy11185 281 KPPGKTLVVGAGY-IGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 281 ~~~~~v~VvG~G~-sa~~~a~~l~~~~~~V~~ 311 (312)
..+++++|||.|. .|.-.+..|...+..||+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv 179 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSV 179 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEE
Confidence 4678899999875 788666666655557775
No 495
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=46.11 E-value=21 Score=30.15 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=27.2
Q ss_pred cEEEEecCcchHHHHHHHHHCCCcEEEEecc
Q psy11185 105 DLLVLGGGSGGLAAAKEAAAHGRKVIVLDYV 135 (312)
Q Consensus 105 d~vivg~G~~gl~~a~~~~~~~~~~~~ve~~ 135 (312)
.+.|+|+|..|..++..+.+.|.++.+++..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 5899999999999999999988888887753
No 496
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=46.06 E-value=31 Score=28.24 Aligned_cols=34 Identities=32% Similarity=0.304 Sum_probs=27.2
Q ss_pred ccCCCCCCcchhh--------hhhhhhHhhhccCCeEEEEEc
Q psy11185 8 EHAPKGNLKDKVD--------SGLECAGFLNGLGFNATVMIR 41 (312)
Q Consensus 8 ~~~~~~~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~ 41 (312)
+..+.++|++++. ||.++|..|++.|++|.++.+
T Consensus 9 ~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 9 ETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp --CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3455677887764 899999999999999999886
No 497
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=46.00 E-value=15 Score=33.20 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.4
Q ss_pred CeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 284 GKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 284 ~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
++|.|||+|..|.-.|..+...+..|++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 5899999999999766666666667765
No 498
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=45.50 E-value=17 Score=32.79 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=25.0
Q ss_pred CCCCCeEEEEcCchhhHHHHHHhhcCceeeee
Q psy11185 280 EKPPGKTLVVGAGYIGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~sa~~~a~~l~~~~~~V~~ 311 (312)
...+++|+|+|.|.+|...|..+...+.+|.+
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv 275 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKV 275 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 34677899999999999888777666556654
No 499
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=45.33 E-value=21 Score=30.02 Aligned_cols=32 Identities=13% Similarity=0.210 Sum_probs=23.7
Q ss_pred CCCCCeEEEEcCch-hhHHHHHHhhcCceeeee
Q psy11185 280 EKPPGKTLVVGAGY-IGKLETWDSNSGCGNVTI 311 (312)
Q Consensus 280 ~~~~~~v~VvG~G~-sa~~~a~~l~~~~~~V~~ 311 (312)
...+++++|||.|. .|.-.+..|...+..|++
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv 189 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSV 189 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEE
Confidence 45678999999776 698766666655557775
No 500
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=44.83 E-value=35 Score=28.15 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=25.6
Q ss_pred CCCCcchhh--------hhhhhhHhhhccCCeEEEEEcc
Q psy11185 12 KGNLKDKVD--------SGLECAGFLNGLGFNATVMIRS 42 (312)
Q Consensus 12 ~~~~~~~~~--------ig~E~A~~l~~~g~~vtl~~~~ 42 (312)
..+|++++. ||.++|..|++.|++|+++.|+
T Consensus 6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence 345666554 8999999999999999999985
Done!