BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11186
(212 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 255 bits (651), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 153/203 (75%), Gaps = 12/203 (5%)
Query: 7 NAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLL 66
NAGV V + +DS E TN+ N++AVGD+++ KPELTPVAV AG+LL
Sbjct: 298 NAGVTVQKDKIPVDS-QEATNVANIYAVGDIIY-----------GKPELTPVAVLAGRLL 345
Query: 67 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFI 126
A RLYG T +MDY++VATTVFTPLEY CVGLSEE A + +GAD +E++H YYKPTEFFI
Sbjct: 346 ARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFI 405
Query: 127 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHP 186
PQ++ + CYLK V ER Q+V G+H+IGP AGEVIQG+AAA+K GLT TL +TVGIHP
Sbjct: 406 PQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHP 465
Query: 187 TLAEEFTRVTITKRSGEDPTPQS 209
T AEEFTR+ ITKRSG DPTP S
Sbjct: 466 TTAEEFTRLAITKRSGLDPTPAS 488
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 253 bits (647), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 152/201 (75%), Gaps = 12/201 (5%)
Query: 7 NAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLL 66
NAGV V + +DS E TN+ N++AVGD+++ KPELTPVAV AG+LL
Sbjct: 294 NAGVTVQKDKIPVDS-QEATNVANIYAVGDIIY-----------GKPELTPVAVLAGRLL 341
Query: 67 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFI 126
A RLYG T +MDY++VATTVFTPLEY CVGLSEE A + +GAD +E++H YYKPTEFFI
Sbjct: 342 ARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFI 401
Query: 127 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHP 186
PQ++ + CYLK V ER Q+V G+H+IGP AGEVIQG+AAA+K GLT TL +TVGIHP
Sbjct: 402 PQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHP 461
Query: 187 TLAEEFTRVTITKRSGEDPTP 207
T AEEFTR+ ITKRSG DPTP
Sbjct: 462 TTAEEFTRLAITKRSGLDPTP 482
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 247 bits (630), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 149/198 (75%), Gaps = 12/198 (6%)
Query: 7 NAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLL 66
NAGV V + +DS E TN+ N++AVGD+++ KPELTPVAV AG+LL
Sbjct: 298 NAGVTVQKDKIPVDS-QEATNVANIYAVGDIIY-----------GKPELTPVAVLAGRLL 345
Query: 67 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFI 126
A RLYG T +MDY++VATTVFTPLEY CVGLSEE A + +GAD +E++H YYKPTEFFI
Sbjct: 346 ARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFI 405
Query: 127 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHP 186
PQ++ + CYLK V ER Q+V G+H+IGP AGEVIQG+AAA+K GLT TL +TVGIHP
Sbjct: 406 PQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHP 465
Query: 187 TLAEEFTRVTITKRSGED 204
T AEEFTR+ ITKRSG D
Sbjct: 466 TTAEEFTRLAITKRSGLD 483
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 235 bits (599), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 148/208 (71%), Gaps = 12/208 (5%)
Query: 5 VSNAGVKVIPENAKIDSD-NEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AG+ P+N KI D E T++P+++A+GDV + +PELTP A++AG
Sbjct: 320 LEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVA-----------EGRPELTPTAIKAG 368
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
KLLA RL+G +T MDY NV TTVFTPLEYGCVGLSEE+A L+G +++E+YHAYYKP E
Sbjct: 369 KLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLE 428
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
F + R+ +CY+K+VC R PQ VLG+HF+GPNAGEV QG+A +KCG ++ + TVG
Sbjct: 429 FTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVG 488
Query: 184 IHPTLAEEFTRVTITKRSGEDPTPQSCC 211
IHPT +EE ++ I+KRSG +PT CC
Sbjct: 489 IHPTCSEEVVKLHISKRSGLEPTVTGCC 516
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 230 bits (586), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 146/210 (69%), Gaps = 12/210 (5%)
Query: 4 AVSNAGVKVIPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
+ GVK+ + KI +D EQTN+P ++A+GD+L + K ELTPVA+QA
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDIL-----------EGKLELTPVAIQA 349
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
G+LLA RLYG T + DY NV TTVFTPLEYGC GLSEEKA E +G +N+E+YH+++ P
Sbjct: 350 GRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPL 409
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
E+ +P R+ +CY KV+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+
Sbjct: 410 EWTVPSRDNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTI 469
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212
GIHP AE FT +++TKRSG D CC
Sbjct: 470 GIHPVCAEIFTTLSVTKRSGGDILQSGCCG 499
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 229 bits (584), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 146/203 (71%), Gaps = 12/203 (5%)
Query: 5 VSNAGVKVIPENAKIDSD-NEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AG+ P+N KI D E T++P+++A+GDV + +PELTP A++AG
Sbjct: 294 LEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVA-----------EGRPELTPTAIKAG 342
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
KLLA RL+G +T MDY NV TTVFTPLEYGCVGLSEE+A L+G +++E+YHAYYKP E
Sbjct: 343 KLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLE 402
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
F + R+ +CY+K+VC R PQ VLG+HF+GPNAGEV QG+A +KCG ++ + TVG
Sbjct: 403 FTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVG 462
Query: 184 IHPTLAEEFTRVTITKRSGEDPT 206
IHPT +EE ++ I+KRSG +PT
Sbjct: 463 IHPTCSEEVVKLHISKRSGLEPT 485
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 226 bits (577), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 145/208 (69%), Gaps = 12/208 (5%)
Query: 4 AVSNAGVKVIPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
+ GVK+ + KI +D EQTN+P ++A+GD+L + K ELTPVA+QA
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDIL-----------EGKLELTPVAIQA 349
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
G+LLA RLYG T + DY NV TTVFTPLEYGC GLSEEKA E +G +N+E+YH+++ P
Sbjct: 350 GRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPL 409
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
E+ +P R+ +CY KV+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+
Sbjct: 410 EWTVPSRDNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTI 469
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSC 210
GIHP AE FT +++TKRSG D C
Sbjct: 470 GIHPVCAEIFTTLSVTKRSGGDILQSGC 497
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 145/210 (69%), Gaps = 12/210 (5%)
Query: 4 AVSNAGVKVIPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
+ GVK+ + KI +D EQTN+P ++A+GD+L ++K ELTPVA+QA
Sbjct: 315 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDIL-----------EDKVELTPVAIQA 363
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
G+LLA RLY T + DY+NV TTVFTPLEYG GLSEEKA E +G +N+E+YH+Y+ P
Sbjct: 364 GRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPL 423
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
E+ IP R+ +CY K++C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+
Sbjct: 424 EWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTI 483
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212
GIHP AE FT +++TKRSG CC
Sbjct: 484 GIHPVCAEVFTTLSVTKRSGASILQAGCCG 513
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 145/210 (69%), Gaps = 12/210 (5%)
Query: 4 AVSNAGVKVIPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
+ GVK+ + KI +D EQTN+P ++A+GD+L ++K ELTPVA+QA
Sbjct: 321 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDIL-----------EDKVELTPVAIQA 369
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
G+LLA RLY T + DY+NV TTVFTPLEYG GLSEEKA E +G +N+E+YH+Y+ P
Sbjct: 370 GRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPL 429
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
E+ IP R+ +CY K++C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+
Sbjct: 430 EWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTI 489
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212
GIHP AE FT +++TKRSG CC
Sbjct: 490 GIHPVCAEVFTTLSVTKRSGASILQAGCCG 519
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 144/208 (69%), Gaps = 12/208 (5%)
Query: 4 AVSNAGVKVIPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
+ GVK+ + KI +D EQTN+P ++A+GD+L ++K ELTPVA+QA
Sbjct: 323 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDIL-----------EDKVELTPVAIQA 371
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
G+LLA RLY T + DY+NV TTVFTPLEYG GLSEEKA E +G +N+E+YH+Y+ P
Sbjct: 372 GRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPL 431
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
E+ IP R+ +CY K++C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+
Sbjct: 432 EWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTI 491
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSC 210
GIHP AE FT +++TKRSG C
Sbjct: 492 GIHPVCAEVFTTLSVTKRSGASILQAGC 519
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 221 bits (563), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 144/210 (68%), Gaps = 12/210 (5%)
Query: 4 AVSNAGVKVIPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
+ GVK+ + KI +D EQTN+P ++A+GD+L ++K ELTPVA+QA
Sbjct: 321 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDIL-----------EDKVELTPVAIQA 369
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
G+LLA RLY T + DY+NV TTVFTPLEYG GLSEEKA E +G +N+E+YH+Y+ P
Sbjct: 370 GRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPL 429
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
E+ IP R+ +CY K++C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+
Sbjct: 430 EWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTI 489
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212
GIHP AE FT +++TKRSG C
Sbjct: 490 GIHPVCAEVFTTLSVTKRSGASILQAGSCG 519
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 206 bits (524), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 131/203 (64%), Gaps = 11/203 (5%)
Query: 9 GVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
GVK+ + +D+EQT + NV+A+GD+ KP+LTPVA+QAG+ LA
Sbjct: 406 GVKLDKNGRVVCTDDEQTTVSNVYAIGDI-----------NAGKPQLTPVAIQAGRYLAR 454
Query: 69 RLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQ 128
RL+ T DY NVATTVFTPLEYG GLSEE A E YG ++E+YH+ +KP E+ +
Sbjct: 455 RLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAH 514
Query: 129 RNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTL 188
R CY+K+VC ++ +VLG+H +GPNAGE+ QGYA A+K G T + T+GIHPT
Sbjct: 515 REDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTC 574
Query: 189 AEEFTRVTITKRSGEDPTPQSCC 211
+E FT + +TK+SG P CC
Sbjct: 575 SETFTTLHVTKKSGVSPIVSGCC 597
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 202 bits (515), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 130/202 (64%), Gaps = 11/202 (5%)
Query: 9 GVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
GVK+ + +D+EQT + NV+A+GD+ KP+LTPVA+QAG+ LA
Sbjct: 406 GVKLDKNGRVVCTDDEQTTVSNVYAIGDI-----------NAGKPQLTPVAIQAGRYLAR 454
Query: 69 RLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQ 128
RL+ T DY NVATTVFTPLEYG GLSEE A E YG ++E+YH+ +KP E+ +
Sbjct: 455 RLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAH 514
Query: 129 RNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTL 188
R CY+K+VC ++ +VLG+H +GPNAGE+ QGYA A+K G T + T+GIHPT
Sbjct: 515 REDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTC 574
Query: 189 AEEFTRVTITKRSGEDPTPQSC 210
+E FT + +TK+SG P C
Sbjct: 575 SETFTTLHVTKKSGVSPIVSGC 596
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 130/202 (64%), Gaps = 11/202 (5%)
Query: 9 GVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
GVK+ + +D+EQT + NV+A+GD+ KP+LTPVA+QAG+ LA
Sbjct: 406 GVKLDKNGRVVCTDDEQTTVSNVYAIGDI-----------NAGKPQLTPVAIQAGRYLAR 454
Query: 69 RLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQ 128
RL+ T DY NVATTVFTPLEYG GLSEE A E YG ++E+YH+ +KP E+ +
Sbjct: 455 RLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAH 514
Query: 129 RNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTL 188
R CY+K+VC ++ +VLG+H +GPNAGE+ QGYA A+K G T + T+GIHPT
Sbjct: 515 REDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTC 574
Query: 189 AEEFTRVTITKRSGEDPTPQSC 210
+E FT + +TK+SG P C
Sbjct: 575 SETFTTLHVTKKSGVSPIVSGC 596
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 143 bits (361), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 26/208 (12%)
Query: 10 VKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
+ V N KI +D+ TNIP++FAVGDV + PEL PVA++AG++LA
Sbjct: 331 MNVNKSNNKIIADHLSCTNIPSIFAVGDVA-----------ENVPELAPVAIKAGEILAR 379
Query: 69 RLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQ 128
RL+ + MDY + T+++TP+EYG G SEEKA ELYG N+E++ + E
Sbjct: 380 RLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVH 439
Query: 129 RNPQ--------------RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLT 174
R C K+VC + +V+G H++GPNAGEV QG A A++ +
Sbjct: 440 RQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVK 499
Query: 175 FETLESTVGIHPTLAEEFTRVTITKRSG 202
+ ++ +GIHPT AE F + +T SG
Sbjct: 500 KKDFDNCIGIHPTDAESFMNLFVTISSG 527
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 117/191 (61%), Gaps = 21/191 (10%)
Query: 7 NAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLL 66
N G+K+ + I + + TN+PN++++GDV+ K ELTPVA+ AG+ L
Sbjct: 293 NVGIKLNSHDQIIADEYQNTNVPNIYSLGDVV------------GKVELTPVAIAAGRKL 340
Query: 67 AARLYG---NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
+ RL+G ++DY+NV + +F+ E G +G+SE++A E YG +N+++Y++ +
Sbjct: 341 SNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMY 400
Query: 124 F-FIPQRNPQRCYLKVVCERAAP-QKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLEST 181
+ + +++P R K+VC A P +KV+G+H +G ++ E++QG+ A+K G T ++
Sbjct: 401 YAMLSEKSPTR--YKIVC--AGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNC 456
Query: 182 VGIHPTLAEEF 192
V IHPT AEE
Sbjct: 457 VAIHPTSAEEL 467
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 109/197 (55%), Gaps = 26/197 (13%)
Query: 21 SDNEQTNIPNVFAVGDVL------HFSPFPVLPLFQEKP----------------ELTPV 58
+N++T++ N++AVGD +L L+ E+ +LTPV
Sbjct: 297 DENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPV 356
Query: 59 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAY 118
A+ AG+LLA RL+ T + +Y+ + T +F+ G +GLSEE A ++YG +N++IY +
Sbjct: 357 AINAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESK 416
Query: 119 YKPTEFFIPQRNP---QRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTF 175
+ F + P ++ YLK+VC + + G+H IG NA E++QG+A A+K T
Sbjct: 417 FTNLFFSVYDIEPELKEKTYLKLVC-VGKDELIKGLHIIGLNADEIVQGFAVALKMNATK 475
Query: 176 ETLESTVGIHPTLAEEF 192
+ + T+ IHPT AEEF
Sbjct: 476 KDFDETIPIHPTAAEEF 492
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 8 AGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLL 66
AG++V N + +D Q TN+P V+A+GD+ + +LTPVA+ AG+ L
Sbjct: 274 AGIEV-QSNGMVPTDAYQNTNVPGVYALGDI------------TGRDQLTPVAIAAGRRL 320
Query: 67 AARLY-GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFF 125
A RL+ G ++DY N+ T VF VGLSE +A E G D L +Y + P +
Sbjct: 321 AERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLG-DVLTVYETSFTPMRYA 379
Query: 126 IPQRNPQRCYLKVVCERAAP-QKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
+ + P + +K+VC A P Q+V+G+H IG A E++QG+A AVK G T ++TV I
Sbjct: 380 LNEHGP-KTAMKLVC--AGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAI 436
Query: 185 HPTLAEEFTRVTITKRSGEDPTPQSCC 211
HP AEE + R DP P+
Sbjct: 437 HPGSAEELVTLKEPVRRPGDPLPEGAA 463
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 15/186 (8%)
Query: 8 AGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLA 67
AGVK + + + TNI ++AVGD ELTPVAV AG+ L+
Sbjct: 275 AGVKTNEKGYIVVDKYQNTNIEGIYAVGD------------NTGAVELTPVAVAAGRRLS 322
Query: 68 ARLYGNG-TTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFI 126
RL+ N +DY N+ T VF+ G VGL+E +A E YG D +++Y + + +
Sbjct: 323 ERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAM-YTA 381
Query: 127 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHP 186
+ Q C +K+VC + +K++G+H IG E++QG+A A+K G T + ++TV IHP
Sbjct: 382 VTTHRQPCRMKLVC-VGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHP 440
Query: 187 TLAEEF 192
T AEEF
Sbjct: 441 TAAEEF 446
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 15/186 (8%)
Query: 8 AGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLA 67
AGVK + + + TNI ++AVGD ELTPVAV AG+ L+
Sbjct: 275 AGVKTNEKGYIVVDKYQNTNIEGIYAVGD------------NTGAVELTPVAVAAGRRLS 322
Query: 68 ARLYGNG-TTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFI 126
RL+ N +DY N+ T VF+ G VGL+E +A E YG D +++Y + + +
Sbjct: 323 ERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAM-YTA 381
Query: 127 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHP 186
+ Q C +K+VC + +K++G+H IG E++QG+A A+K G T + ++TV IHP
Sbjct: 382 VTTHRQPCRMKLVC-VGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHP 440
Query: 187 TLAEEF 192
T AEEF
Sbjct: 441 TAAEEF 446
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 300 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 347
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 348 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 407
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 408 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 465
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 466 AIHPTSSEEL 475
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 299 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 346
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 347 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 406
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 407 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 464
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 465 AIHPTSSEEL 474
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 299 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 346
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 347 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 406
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 407 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 464
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 465 AIHPTSSEEL 474
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 284 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 331
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 332 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 391
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 392 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 449
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 450 AIHPTSSEEL 459
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 282 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 329
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 330 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 389
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 390 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 447
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 448 AIHPTSSEEL 457
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 298 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 345
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 346 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 405
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 406 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 463
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 464 AIHPTSSEEL 473
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 299 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 346
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 347 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 406
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 407 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 464
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 465 AIHPTSSEEL 474
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 299 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 346
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 347 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 406
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 407 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 464
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 465 AIHPTSSEEL 474
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 282 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 329
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 330 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 389
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+VC +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 390 YHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 447
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 448 AIHPTSSEEL 457
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 104/190 (54%), Gaps = 15/190 (7%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+++ G++ + I + + TN+ ++AVGDV K LTPVA+ AG
Sbjct: 299 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAG 346
Query: 64 KLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y + P
Sbjct: 347 RKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPM 406
Query: 123 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ +R +C +K+V +KV+G+H G E++QG+A AVK G T ++TV
Sbjct: 407 YHAVTKRK-TKCVMKMVXANK-EEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 464
Query: 183 GIHPTLAEEF 192
IHPT +EE
Sbjct: 465 AIHPTSSEEL 474
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 16/189 (8%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGVKV A + + TN+ +++AVGDV +LTPVA+
Sbjct: 294 GLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV------------TGHIQLTPVAIHDA 341
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
+ N +T DY + T VF+ E G VGLSEE A Y +EIY ++P
Sbjct: 342 MCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRY--KRVEIYRTVFRPMR 399
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
+ +P++ ++K+V + + V+G H +G NAGE+ Q ++K LT + + T+
Sbjct: 400 NVLSG-SPEKMFMKLVVD-GESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMA 457
Query: 184 IHPTLAEEF 192
+HPT++EE
Sbjct: 458 VHPTMSEEL 466
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 5 VSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGK 64
+ N GVK+ P+ + +TN+PN++A+GD+ ++ LTPVA+ G
Sbjct: 296 LGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI------------TDRLMLTPVAINEGA 343
Query: 65 LLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF 124
L ++GN + D+ VA+ VF+ G GL EE A + + + + +Y + + P
Sbjct: 344 ALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSSFTPLMH 401
Query: 125 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
I ++ K+V + VLG+H +G A E+IQ ++ +T+G+
Sbjct: 402 NISGSKYKKFVAKIVTNHS-DGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGV 460
Query: 185 HPTLAEEF 192
HPT AEE
Sbjct: 461 HPTSAEEL 468
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 5 VSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGK 64
+ N GVK+ P+ + +TN+PN++A+GD+ ++ LTPVA+ G
Sbjct: 299 LGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI------------TDRLMLTPVAINEGA 346
Query: 65 LLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF 124
L ++GN + D+ VA+ VF+ G GL EE A + + + + +Y + + P
Sbjct: 347 ALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSSFTPLMH 404
Query: 125 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
I ++ K+V + VLG+H +G A E+IQ ++ +T+G+
Sbjct: 405 NISGSKYKKFVAKIVTNHS-DGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGV 463
Query: 185 HPTLAEEF 192
HPT AEE
Sbjct: 464 HPTSAEEL 471
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 8 AGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLA 67
AGV+ A I +T+ P ++A+GDV ++ +LTPVA+
Sbjct: 278 AGVRTNELGAIIVDAFSRTSTPGIYALGDV------------TDRVQLTPVAIHEAXCFI 325
Query: 68 ARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIP 127
Y N T D+ +AT VF+ E G VG++EE+A + +E+Y A ++P + +
Sbjct: 326 ETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKF--QEIEVYRAEFRPXKATLS 383
Query: 128 QRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPT 187
R + VV AA +KV+G H +G +AGE Q +++ G T + + T +HPT
Sbjct: 384 GRKEKTIXKLVV--NAADRKVVGAHILGHDAGEXAQLLGISLRAGCTKDDFDRTXAVHPT 441
Query: 188 LAEEF 192
AEE
Sbjct: 442 AAEEL 446
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 5 VSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV+V A K+D+ +TN+ N++A+GDV ++ LTPVA+ G
Sbjct: 296 LDKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDV------------TDRVMLTPVAINEG 342
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
++ N D+ VA VF+ G G EE A + Y D + +Y + + P
Sbjct: 343 AAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLM 400
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
I ++ +++V A + VLG+H +G ++ E+IQ A +K G +T+G
Sbjct: 401 HNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIG 459
Query: 184 IHPTLAEEF 192
+HPT AEE
Sbjct: 460 VHPTSAEEL 468
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 5 VSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV+V A K+D+ +TN+ N++A+GDV ++ LTPVA+ G
Sbjct: 296 LDKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDV------------TDRVMLTPVAINEG 342
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
++ N D+ VA VF+ G G EE A + Y D + +Y + + P
Sbjct: 343 AAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLM 400
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
I ++ +++V A + VLG+H +G ++ E+IQ A +K G +T+G
Sbjct: 401 HNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIG 459
Query: 184 IHPTLAEEF 192
+HPT AEE
Sbjct: 460 VHPTSAEEL 468
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 5 VSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV+V A K+D+ +TN+ N++A+GDV ++ LTPVA+ G
Sbjct: 295 LEKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDV------------TDRVMLTPVAINEG 341
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
++ N D+ VA VF+ G G EE A + Y D + +Y + + P
Sbjct: 342 AAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLM 399
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
I ++ +++V A + VLG+H +G ++ E+IQ A +K G + +T+G
Sbjct: 400 HNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKMGAKISDVYNTIG 458
Query: 184 IHPTLAEEF 192
+HPT AEE
Sbjct: 459 VHPTSAEEL 467
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 5 VSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV+V A K+D+ +TN+ N++A+GDV ++ LTPVA+ G
Sbjct: 295 LEKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDV------------TDRVMLTPVAINEG 341
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
++ N D+ VA VF+ G G EE A + Y D + +Y + + P
Sbjct: 342 AAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLM 399
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
I ++ +++V A + VLG+H +G ++ E+IQ A +K G +T+G
Sbjct: 400 HNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIG 458
Query: 184 IHPTLAEEF 192
+HPT AEE
Sbjct: 459 VHPTSAEEL 467
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 5 VSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGK 64
+ NAGV + ++D + +TN+ N++A+GDV + + LTPVA+
Sbjct: 296 LQNAGVMIKNGGVQVD-EYSRTNVSNIYAIGDVTN------------RVMLTPVAINEAA 342
Query: 65 LLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF 124
L ++G + D+ VA+ VF+ G GL EE A + Y + + +Y + + P
Sbjct: 343 ALVDTVFGTNPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSSFTPLMH 400
Query: 125 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
I + K++ + VLG+H +G NA E+IQG +K +T+G+
Sbjct: 401 NISGSKYKTFVAKIITNHS-DGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGV 459
Query: 185 HPTLAEEF 192
HPT AEE
Sbjct: 460 HPTSAEEL 467
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 5 VSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGK 64
+ NAGV + ++D + +TN+ N++A+GDV + + LTPVA+
Sbjct: 297 LQNAGVMIKNGGVQVD-EYSRTNVSNIYAIGDVTN------------RVMLTPVAINEAA 343
Query: 65 LLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF 124
L ++G + D+ VA+ VF+ G GL EE A + Y + + +Y + + P
Sbjct: 344 ALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSSFTPLMH 401
Query: 125 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
+ + K++ + VLG+H +G NA E+IQG +K +T+G+
Sbjct: 402 KVSGSKYKTFVAKIITNHS-DGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGV 460
Query: 185 HPTLAEEF 192
HPT AEE
Sbjct: 461 HPTSAEEL 468
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 5 VSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGK 64
+ NAGV + ++D + +TN+ N++A+GDV + + LTPVA+
Sbjct: 295 LQNAGVMIKNGGVQVD-EYSRTNVSNIYAIGDVTN------------RVMLTPVAINEAA 341
Query: 65 LLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF 124
L ++G + D+ VA+ VF+ G GL EE A + Y + + +Y + + P
Sbjct: 342 ALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSSFTPLMH 399
Query: 125 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
+ + K++ + VLG+H +G NA E+IQG +K +T+G+
Sbjct: 400 KVSGSKYKTFVAKIITNHS-DGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGV 458
Query: 185 HPTLAEEF 192
HPT AEE
Sbjct: 459 HPTSAEEL 466
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 5 VSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGK 64
+ NAGV + ++D + +TN+ N++A+GDV + + LTPVA+
Sbjct: 296 LQNAGVMIKNGGVQVD-EYSRTNVSNIYAIGDVTN------------RVMLTPVAINEAA 342
Query: 65 LLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF 124
L ++G + D+ VA+ VF+ G GL EE A + Y + + +Y + + P
Sbjct: 343 ALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSSFTPLMH 400
Query: 125 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 184
+ + K++ + VLG+H +G NA E+IQG +K +T+G+
Sbjct: 401 KVSGSKYKTFVAKIITNHS-DGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGV 459
Query: 185 HPTLAEEF 192
HPT AEE
Sbjct: 460 HPTSAEEL 467
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 5 VSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV+ +N + D +T++ N++A+GDV + + LTPVA+ G
Sbjct: 316 LDKAGVRT-GKNGAVQVDAYSKTSVDNIYAIGDVTN------------RVMLTPVAINEG 362
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
++G D+ VA VF+ G G++EE+A + Y + + +Y + + P
Sbjct: 363 AAFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVAVYASSFTPLM 420
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
I + ++++ + + VLG+H +G +A E+IQ +K G ST+G
Sbjct: 421 HNISGSKHKEFMIRIITNESNGE-VLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIG 479
Query: 184 IHPTLAEEF 192
+HPT AEE
Sbjct: 480 VHPTSAEEL 488
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 5 VSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV+ +N + D +T++ N++A+GDV + + LTPVA+ G
Sbjct: 316 LDKAGVRT-GKNGAVQVDAYSKTSVDNIYAIGDVTN------------RVMLTPVAINEG 362
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
++G D+ VA VF+ G G++EE+A + Y + + +Y + + P
Sbjct: 363 AAFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVAVYASSFTPLM 420
Query: 124 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVG 183
I + ++++ + + VLG+H +G +A E+IQ +K G ST+G
Sbjct: 421 HNISGSKHKEFMIRIITNESNGE-VLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIG 479
Query: 184 IHPTLAEEF 192
+HPT AEE
Sbjct: 480 VHPTSAEEL 488
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 13 IPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72
IP N + QT IPN++A+GDV+ P+L E + V AG
Sbjct: 302 IPVNTRF-----QTKIPNIYAIGDVV---AGPMLAHKAEDEGIICVEGMAG--------- 344
Query: 73 NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQ 132
G +DY V + ++T E VG SEE+ +E + +E + + N
Sbjct: 345 -GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNAD 399
Query: 133 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 192
+ + + + +VLG H +GP AGE++ A A++ G + E + HPTL+E F
Sbjct: 400 TDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 459
Query: 193 TRVTITKRSGE 203
+ G+
Sbjct: 460 REANLAASFGK 470
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 13 IPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72
IP N + QT IPN++A+GDV+ P+L E + V AG
Sbjct: 302 IPVNTRF-----QTKIPNIYAIGDVV---AGPMLAHKAEDEGIICVEGMAG--------- 344
Query: 73 NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQ 132
G +DY V + ++T E VG SEE+ +E + +E + + N
Sbjct: 345 -GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNAD 399
Query: 133 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 192
+ + + + +VLG H +GP AGE++ A A++ G + E + HPTL+E F
Sbjct: 400 TDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 459
Query: 193 TRVTITKRSGE 203
+ G+
Sbjct: 460 REANLAASFGK 470
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 13 IPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72
IP N + QT IPN++A+GDV+ P+L E + V AG
Sbjct: 323 IPVNTRF-----QTKIPNIYAIGDVV---AGPMLAHKAEDEGIICVEGMAG--------- 365
Query: 73 NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQ 132
G +DY V + ++T E VG SEE+ +E + +E + + N
Sbjct: 366 -GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNAD 420
Query: 133 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 192
+ + + + +VLG H +GP AGE++ A A++ G + E + HPTL+E F
Sbjct: 421 TDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 480
Query: 193 TRVTITKRSGE 203
+ G+
Sbjct: 481 REANLAASFGK 491
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 25/175 (14%)
Query: 22 DNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQ 81
D+ +T++P VFA+GDV+ + L A + G ++A R+ G+ QM+Y
Sbjct: 304 DHCKTSVPGVFAIGDVVRGAM------------LAHKASEEGVMVAERIAGH-KAQMNYD 350
Query: 82 NVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQR----NPQRCYLK 137
+ + ++T E VG K E+ A+ +E+ + F R N +K
Sbjct: 351 LIPSVIYTHPEIAWVG----KTEQTLKAEGVEVNVGTF---PFAASGRAMAANDTTGLVK 403
Query: 138 VVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 192
V+ + A +VLG+H IGP+A E++Q A ++ G + E L V HPTL+E
Sbjct: 404 VIAD-AKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEAL 457
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 26 TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVAT 85
T++P V+A+GDV+ + L A + G ++A R+ G+ QM+Y +
Sbjct: 308 TSVPGVYAIGDVVRGAM------------LAHKASEEGVVVAERIAGH-KAQMNYDLIPA 354
Query: 86 TVFTPLEYGCVGLSEE--KAEELYGADNLEIYHAYYKPTEFFIPQR----NPQRCYLKVV 139
++T E VG +E+ KAE + A N+ ++ F R N ++KV+
Sbjct: 355 VIYTHPEIAGVGKTEQALKAEGV--AINVGVF-------PFAASGRAMAANDTAGFVKVI 405
Query: 140 CERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 192
+ A +VLG+H IGP+A E++Q A A++ G + E L V HP L+E
Sbjct: 406 AD-AKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEAL 457
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 26/177 (14%)
Query: 19 IDSDNE-QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQ 77
I+ D + +T++PN+FA+GD++ P L A GK+ A + G+ +
Sbjct: 290 IEVDQQCRTSVPNIFAIGDIV------------PGPALAHKASYEGKVAAEAIAGH-PSA 336
Query: 78 MDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQR----NPQR 133
+DY + VF+ E VG E++A++ + +++ A + F R N
Sbjct: 337 VDYVAIPAVVFSDPECASVGYFEQQAKD----EGIDVIAAKFP---FAANGRALALNDTD 389
Query: 134 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAE 190
+LK+V R ++G IGPNA ++I A++ G+T E + T+ HPTL E
Sbjct: 390 GFLKLVV-RKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGE 445
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 25 QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVA 84
TN+ V+A+GDV+ P P+L E+ + V AGK+ +DY V
Sbjct: 306 STNVSGVYAIGDVI---PGPMLAHKAEEDGVACVEYLAGKV----------GHVDYDKVP 352
Query: 85 TTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEF-FIPQRNPQRC-----YLKV 138
V+T E VG +EE+ +E G + Y+ +F F+ + +K+
Sbjct: 353 GVVYTNPEVASVGKTEEQVKET-GVE--------YRVGKFPFMANSRAKAIDNAEGLVKI 403
Query: 139 VCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAE 190
+ E+ K+LG+H + PNAGE+I A A++ + E + HPT++E
Sbjct: 404 IAEKET-DKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSE 454
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 92/202 (45%), Gaps = 44/202 (21%)
Query: 4 AVSNAGVKV-----IPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPV 58
+ AGVKV I NA++ +T++P V+A+GD + P PL K
Sbjct: 277 GLEKAGVKVDERGFIRVNARM-----ETSVPGVYAIGD----AARP--PLLAHK------ 319
Query: 59 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAY 118
A++ G L+AA + DYQ V + V+T E+ VGL+EE+A+ A
Sbjct: 320 AMREG-LIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEEAK-----------RAG 366
Query: 119 YKPTEFFIPQRNPQRC--------YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVK 170
YK P R +KVV + +LG+ +GP AGE+I A A++
Sbjct: 367 YKVKVGKFPLAASGRALTLGGAEGMVKVVGDEET-DLLLGVFIVGPQAGELIAEAALALE 425
Query: 171 CGLTFETLESTVGIHPTLAEEF 192
G T L TV HPTL+E
Sbjct: 426 MGATLTDLALTVHPHPTLSESL 447
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 9 GVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
G++V + D + P++ VGDV P+ K E +A A
Sbjct: 298 GLEVDKRGRLVIDDQFNSKFPHIKVVGDV------TFGPMLAHKAEEEGIA-------AV 344
Query: 69 RLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQ 128
+ G ++Y N+ + +++ E VG +EE+ +E G D YK +F
Sbjct: 345 EMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEA-GID--------YKIGKFPFAA 395
Query: 129 RNPQRC------YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
+ + ++K++ + + +++LG H IGPNAGE+I A++ G + E +
Sbjct: 396 NSRAKTNQDTEGFVKILID-SKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVC 454
Query: 183 GIHPTLAEEFTRVTI 197
HPTL+E F +
Sbjct: 455 HAHPTLSEAFKEANM 469
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 31/202 (15%)
Query: 4 AVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
++ AGV V+ +++ D QT+I V+A+GDV+ P K E VAV
Sbjct: 306 GLAKAGV-VLDSRGRVEIDRHFQTSIAGVYAIGDVVRG------PXLAHKAEDEGVAV-- 356
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
A + ++Y + V+T E VG +EE+ L+ YK
Sbjct: 357 -----AEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEE---------LKAAGVAYKIG 402
Query: 123 EFFIPQRNPQRC------YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFE 176
+F R ++K++ ++ +VLG H IG AGE I A + G + E
Sbjct: 403 KFPFTANGRARAXLQTDGFVKILADKE-TDRVLGGHIIGFGAGEXIHEIAVLXEFGGSSE 461
Query: 177 TLESTVGIHPTLAEEFTRVTIT 198
L T HPT +E ++
Sbjct: 462 DLGRTCHAHPTXSEAVKEAALS 483
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 1 IPPAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAV 60
IP G+ + +D + +TNIPNVFA GD +P+ AV
Sbjct: 274 IPEGAREIGLSISKTGIVVD-ETMKTNIPNVFATGDANGLAPY------------YHAAV 320
Query: 61 QAGKLLAARLYGNG--TTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAY 118
+ A + NG +D +++ T++T VG+ KA ++ +EI A
Sbjct: 321 RMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKM----GIEIVEAE 376
Query: 119 YKPTEFFIPQRNPQR-CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFET 177
Y E Q Q+ LK++ ER + +++G IG ++ +I AV GL +
Sbjct: 377 YNMEEDVSAQIYGQKEGVLKLIFERGS-MRLIGAWMIGVHSQYLINELGLAVAYGLNAKQ 435
Query: 178 LESTVGIHPTLAE 190
L S HP+ E
Sbjct: 436 LASFAEQHPSTNE 448
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 28/178 (15%)
Query: 21 SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDY 80
D+ +T+IP+V+A+GDV+ P + K E VA A + ++Y
Sbjct: 299 GDHFETSIPDVYAIGDVVDKGP-----MLAHKAEDEGVA-------CAEILAGKPGHVNY 346
Query: 81 QNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRC------ 134
+ ++T E VG SE D L+ YK +F + +
Sbjct: 347 GVIPAVIYTMPEVASVGKSE---------DELKKEGVAYKVGKFPFNANSRAKAVSTEDG 397
Query: 135 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 192
++KV+ ++A ++LG+H + AGE+I A++ G + E + T HPT++E
Sbjct: 398 FVKVLVDKAT-DRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEAL 454
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 4 AVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA 62
++ NAG+ E +I D +T +P+++A+GDV+ P+ K +A
Sbjct: 270 SLENAGLST-DERGRIPVDEHLRTRVPHIYAIGDVVRG------PMLAHKASEEGIA--- 319
Query: 63 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
A G +DYQ + + V+T E VG +EE+ L+ YK
Sbjct: 320 ----AVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEE---------LKAQGIPYKVG 366
Query: 123 EFFIPQRNPQRC------YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFE 176
+F R ++KV+ A ++LG+H IG G+V+ A A+ + E
Sbjct: 367 KFPYSASGRARAMGETEGFIKVLAH-AKTDRILGVHGIGARVGDVLAEAALALFFKASAE 425
Query: 177 TLESTVGIHPTLAE 190
L HP+L+E
Sbjct: 426 DLGRAPHAHPSLSE 439
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
A+ AGV V + A + +T+ PN++A GD ++P+ VA AG
Sbjct: 277 ALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDC------------TDQPQFVYVAAAAG 324
Query: 64 KLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTE 123
A + G G +D + VFT + VG SE +A D +E
Sbjct: 325 TRAAINMTG-GDAALDLTAMPAVVFTDPQVATVGYSEAEAHH----DGIETDSRTLTLDN 379
Query: 124 FFIPQRN-PQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTV 182
N R ++K+V E + +++G+ + P AGE+IQ A A++ +T + L +
Sbjct: 380 VPRALANFDTRGFIKLVIEEGS-HRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQL 438
Query: 183 GIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212
+ T+ E T +D SCC+
Sbjct: 439 FPYLTMVEGLKLAAQT--FNKDVKQLSCCA 466
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 25 QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVA 84
QT++ NV+A+GDV +P L A+ G+++A + G + + +A
Sbjct: 294 QTSMHNVWAIGDV------------AGEPMLAHRAMAQGEMVAEIIAGK-ARRFEPAAIA 340
Query: 85 TTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAA 144
FT E VG + E+A + G D + + + +++VV R
Sbjct: 341 AVCFTDPEVVVVGKTPEQASQ-QGLDCIVAQFPFAANGRAM--SLESKSGFVRVVARRD- 396
Query: 145 PQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAE 190
+LG +G E+ +A +++ G E + T+ HPTL E
Sbjct: 397 NHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGE 442
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 32/178 (17%)
Query: 24 EQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83
+T ++A GD P L VA G++ G G + + + V
Sbjct: 305 SRTLATGIYAAGDCTGLLP------------LASVAAMQGRIAMYHALGEGVSPIRLRTV 352
Query: 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRC--------Y 135
A TVFT E VG+ + I +P R R +
Sbjct: 353 AATVFTRPEIAAVGVPQSV-----------IDAGSVAARTIMLPLRTNARAKMSEMRHGF 401
Query: 136 LKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFT 193
+K+ C R+ + + P A E+I A AV+ +T L T+ ++P+L+ T
Sbjct: 402 VKIFCRRSTGVVIG-GVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSIT 458
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV + A D +TN+ +++A+GDV +L VA G
Sbjct: 279 GLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDV------------NGLLQLAHVAEAQG 326
Query: 64 KLLAARLYGNGTTQM-DYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ A + G T + D++ + F GL+E++A E Y
Sbjct: 327 VVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARN-------EGYDVVVAKF 379
Query: 123 EFFIPQR-----NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFET 177
F + +P ++K+V + A ++LG H +G + E++ A + LT
Sbjct: 380 PFTANAKAHGVGDPS-GFVKLVAD-AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASE 437
Query: 178 LESTVGIHPTLAE 190
L V HPT++E
Sbjct: 438 LARNVHTHPTMSE 450
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 27/193 (13%)
Query: 4 AVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAG 63
+ AGV + A D +TN+ +++A+GDV +L VA G
Sbjct: 277 GLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDV------------NGLLQLAHVAEAQG 324
Query: 64 KLLAARLYGNGTTQM-DYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPT 122
+ A + G T + D++ + F GL+E++A E Y
Sbjct: 325 VVAAETIAGAETLTLGDHRXLPRATFCQPNVASFGLTEQQARN-------EGYDVVVAKF 377
Query: 123 EFFIPQR-----NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFET 177
F + +P ++K+V + A ++LG H +G + E++ A + LT
Sbjct: 378 PFTANAKAHGVGDPS-GFVKLVAD-AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASE 435
Query: 178 LESTVGIHPTLAE 190
L V HPT +E
Sbjct: 436 LARNVHTHPTXSE 448
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 9 GVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
GV++ A ++ QT++ NV+A GDV V+ + L P + G + +
Sbjct: 253 GVRIGETGAIWTNEKMQTSVENVYAAGDVAETR--HVITGRRVWVPLAPAGNKMGYVAGS 310
Query: 69 RLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQ 128
+ G A T F +E G GL+E +A + + ++ A+ K + P
Sbjct: 311 NIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALK----EGYDVRTAFIKASTR--PH 364
Query: 129 RNP--QRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLT 174
P + +LK V + ++LG+ +G + I AA + G T
Sbjct: 365 YYPGGREIWLKGVVDNET-NRLLGVQVVGSDILPRIDTAAAMLMAGFT 411
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 47/193 (24%)
Query: 9 GVKVIPENAKIDSDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAA 68
G+ + P+ + ++ QT++PNV+AVGD++ P + +F+ A ++G A
Sbjct: 326 GLDLGPKGEVLVNEYLQTSVPNVYAVGDLIG-GP---MEMFK--------ARKSGCYAAR 373
Query: 69 RLYGNGTTQMDY--QNVATTVFTPLEYGCVGLSEEKAE---------------------E 105
+ G ++ Y +N + T E +G+ EE+A
Sbjct: 374 NVMGE---KISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVA 430
Query: 106 LYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGY 165
L +D +Y A+ K T + K+V + A +KVLG H +G A + Q
Sbjct: 431 LPASDRTMLY-AFGKGTAHM-------SGFQKIVID-AKTRKVLGAHHVGYGAKDAFQYL 481
Query: 166 AAAVKCGLTFETL 178
+K GLT + L
Sbjct: 482 NVLIKQGLTVDEL 494
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 261 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 313
Query: 76 TQM 78
+
Sbjct: 314 IEF 316
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 262 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 314
Query: 76 TQM 78
+
Sbjct: 315 IEF 317
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 261 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 313
Query: 76 TQM 78
+
Sbjct: 314 IEF 316
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 261 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 313
Query: 76 TQM 78
+
Sbjct: 314 IEF 316
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 261 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 313
Query: 76 TQM 78
+
Sbjct: 314 IEF 316
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 261 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 313
Query: 76 TQM 78
+
Sbjct: 314 IEF 316
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 21 SDNEQTNIPNVFAVGDVL--HFSPFPVLPLFQEKPELTPVAV---QAGKLLAARLYGNGT 75
+D +TN+PN++A+GD+ H+ + P P+A +A ++A ++ GN T
Sbjct: 261 NDKFETNVPNIYAIGDIATSHYRHVDL-------PASVPLAWGAHRAASIVAEQIAGNDT 313
Query: 76 TQM 78
+
Sbjct: 314 IEF 316
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 25 QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARL 70
QT++PNVFA+GD + PV F L AV+ G ++A L
Sbjct: 268 QTSVPNVFAIGDCISVXNEPVAETFY--APLVNNAVRTGLVVANNL 311
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 7 NAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKL 65
AGV V + I+ D + +TN+P+++A+GD++ +P L AV G +
Sbjct: 295 KAGVAVT-DRGFIEVDKQMRTNVPHIYAIGDIVG------------QPMLAHKAVHEGHV 341
Query: 66 LAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAE 104
A G+ D + + +T E VG +E A+
Sbjct: 342 AAENCAGH-KAYFDARVIPGVAYTSPEVAWVGETELSAK 379
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 7 NAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKL 65
AGV V + I+ D + +TN+P+++A+GD++ +P L AV G +
Sbjct: 295 KAGVAVT-DRGFIEVDKQMRTNVPHIYAIGDIVG------------QPMLAHKAVHEGHV 341
Query: 66 LAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAE 104
A G+ D + + +T E VG +E A+
Sbjct: 342 AAENCAGH-KAYFDARVIPGVAYTSPEVAWVGETELSAK 379
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,573,214
Number of Sequences: 62578
Number of extensions: 270416
Number of successful extensions: 825
Number of sequences better than 100.0: 81
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 89
length of query: 212
length of database: 14,973,337
effective HSP length: 95
effective length of query: 117
effective length of database: 9,028,427
effective search space: 1056325959
effective search space used: 1056325959
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)