Query psy11186
Match_columns 212
No_of_seqs 135 out of 1891
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 20:18:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11186hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 2E-38 7E-43 291.1 19.2 198 3-212 324-537 (542)
2 3qfa_A Thioredoxin reductase 1 100.0 3.1E-37 1.1E-41 281.6 21.1 197 4-212 321-519 (519)
3 3dgh_A TRXR-1, thioredoxin red 100.0 2.6E-36 9E-41 272.6 20.4 186 4-203 295-482 (483)
4 3dgz_A Thioredoxin reductase 2 100.0 2.4E-36 8.3E-41 273.3 19.6 193 4-208 293-487 (488)
5 3dk9_A Grase, GR, glutathione 100.0 2.4E-35 8E-40 265.9 21.1 177 3-194 298-476 (478)
6 3lad_A Dihydrolipoamide dehydr 100.0 2E-35 6.9E-40 266.0 20.0 186 4-209 286-472 (476)
7 4dna_A Probable glutathione re 100.0 2.6E-35 8.8E-40 264.8 19.7 176 5-197 275-451 (463)
8 3urh_A Dihydrolipoyl dehydroge 100.0 3.7E-35 1.3E-39 265.6 20.2 177 4-198 306-483 (491)
9 4eqs_A Coenzyme A disulfide re 100.0 2.7E-35 9.3E-40 263.6 17.7 183 3-198 243-432 (437)
10 3l8k_A Dihydrolipoyl dehydroge 100.0 9.1E-35 3.1E-39 261.6 21.2 178 4-199 277-457 (466)
11 1xdi_A RV3303C-LPDA; reductase 100.0 7.6E-35 2.6E-39 264.2 20.3 188 5-212 286-474 (499)
12 2x8g_A Thioredoxin glutathione 100.0 7.6E-35 2.6E-39 269.4 19.7 195 5-212 402-598 (598)
13 1ojt_A Surface protein; redox- 100.0 2.2E-34 7.5E-39 260.1 21.9 184 5-208 293-477 (482)
14 3o0h_A Glutathione reductase; 100.0 1.7E-34 6E-39 260.9 17.5 177 5-198 295-472 (484)
15 3ic9_A Dihydrolipoamide dehydr 100.0 5.1E-34 1.7E-38 258.7 20.2 180 4-198 280-465 (492)
16 1fec_A Trypanothione reductase 100.0 3.4E-34 1.1E-38 259.7 17.6 176 4-196 294-471 (490)
17 2hqm_A GR, grase, glutathione 100.0 1E-33 3.4E-38 255.7 20.5 180 4-198 290-473 (479)
18 2a8x_A Dihydrolipoyl dehydroge 100.0 7.2E-34 2.5E-38 255.3 18.9 177 5-198 278-456 (464)
19 2qae_A Lipoamide, dihydrolipoy 100.0 1.8E-33 6.2E-38 253.0 20.2 182 5-206 283-466 (468)
20 1ges_A Glutathione reductase; 100.0 1.2E-33 4.1E-38 253.4 18.8 176 4-194 271-448 (450)
21 1dxl_A Dihydrolipoamide dehydr 100.0 2.3E-33 7.7E-38 252.1 20.5 176 5-198 286-462 (470)
22 2wpf_A Trypanothione reductase 100.0 1.1E-33 3.6E-38 256.9 18.1 176 4-196 298-475 (495)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 3.1E-33 1.1E-37 251.7 19.5 176 5-198 289-465 (474)
24 3kd9_A Coenzyme A disulfide re 100.0 3.4E-33 1.2E-37 249.9 19.5 185 4-199 248-437 (449)
25 1ebd_A E3BD, dihydrolipoamide 100.0 4.1E-33 1.4E-37 249.8 19.9 176 5-198 277-453 (455)
26 2r9z_A Glutathione amide reduc 100.0 2.6E-33 8.8E-38 252.2 18.1 186 4-205 270-457 (463)
27 2eq6_A Pyruvate dehydrogenase 100.0 7.4E-33 2.5E-37 249.1 20.9 183 4-207 277-460 (464)
28 1zk7_A HGII, reductase, mercur 100.0 1.4E-32 4.8E-37 247.1 21.7 188 4-212 277-466 (467)
29 1v59_A Dihydrolipoamide dehydr 100.0 1.6E-32 5.5E-37 247.2 20.4 177 4-198 293-470 (478)
30 1onf_A GR, grase, glutathione 100.0 2.9E-32 1E-36 247.5 20.9 190 4-197 281-497 (500)
31 1mo9_A ORF3; nucleotide bindin 100.0 1.7E-32 5.8E-37 250.4 18.8 178 4-198 321-516 (523)
32 3iwa_A FAD-dependent pyridine 100.0 5.8E-32 2E-36 243.3 16.8 184 4-198 262-453 (472)
33 1lvl_A Dihydrolipoamide dehydr 100.0 4.6E-31 1.6E-35 237.1 20.6 182 4-206 274-456 (458)
34 3cgb_A Pyridine nucleotide-dis 100.0 1.2E-30 4E-35 235.7 20.0 185 3-198 285-475 (480)
35 2yqu_A 2-oxoglutarate dehydrog 100.0 1.8E-30 6E-35 232.7 19.8 177 4-198 270-447 (455)
36 3ntd_A FAD-dependent pyridine 100.0 2.7E-30 9.1E-35 236.8 18.4 183 4-197 271-459 (565)
37 3oc4_A Oxidoreductase, pyridin 100.0 8.3E-31 2.9E-35 234.8 13.6 176 9-198 252-434 (452)
38 2cdu_A NADPH oxidase; flavoenz 100.0 6E-30 2.1E-34 229.1 17.8 183 4-198 251-439 (452)
39 3ics_A Coenzyme A-disulfide re 100.0 6.2E-30 2.1E-34 235.9 17.2 182 4-196 286-474 (588)
40 1nhp_A NADH peroxidase; oxidor 100.0 1.1E-29 3.8E-34 227.0 16.8 183 4-198 250-438 (447)
41 2bc0_A NADH oxidase; flavoprot 100.0 3.1E-29 1E-33 227.0 17.6 183 4-198 295-484 (490)
42 3klj_A NAD(FAD)-dependent dehy 99.8 3.5E-19 1.2E-23 156.8 12.7 150 3-194 234-384 (385)
43 2v3a_A Rubredoxin reductase; a 99.7 1.9E-17 6.6E-22 144.8 11.1 129 4-166 247-377 (384)
44 1xhc_A NADH oxidase /nitrite r 99.7 2.6E-17 9E-22 143.7 7.2 113 4-158 238-353 (367)
45 2gqw_A Ferredoxin reductase; f 99.6 5.5E-15 1.9E-19 130.5 16.3 140 4-176 243-388 (408)
46 1q1r_A Putidaredoxin reductase 99.6 1.6E-15 5.5E-20 134.9 12.9 151 4-187 254-410 (431)
47 3ef6_A Toluene 1,2-dioxygenase 99.5 3.3E-14 1.1E-18 125.6 12.6 141 4-180 245-393 (410)
48 3fg2_P Putative rubredoxin red 99.5 6.3E-14 2.2E-18 123.3 13.5 137 4-175 245-387 (404)
49 3lxd_A FAD-dependent pyridine 99.5 7.9E-14 2.7E-18 123.0 14.1 142 4-180 255-405 (415)
50 1m6i_A Programmed cell death p 99.2 1.2E-11 4.1E-16 111.8 6.4 161 4-180 286-483 (493)
51 4gcm_A TRXR, thioredoxin reduc 99.1 1.2E-10 4E-15 98.3 6.6 55 4-71 247-302 (312)
52 4fk1_A Putative thioredoxin re 99.0 1E-10 3.6E-15 98.5 4.1 56 4-71 240-296 (304)
53 3vrd_B FCCB subunit, flavocyto 99.0 6.4E-10 2.2E-14 97.1 7.0 71 3-84 260-337 (401)
54 3cty_A Thioredoxin reductase; 98.9 1.9E-09 6.6E-14 90.9 6.6 58 3-72 255-313 (319)
55 2ywl_A Thioredoxin reductase r 98.9 1.1E-09 3.6E-14 85.3 4.5 54 5-72 113-168 (180)
56 3hyw_A Sulfide-quinone reducta 98.9 3.3E-09 1.1E-13 94.0 7.1 67 4-71 259-329 (430)
57 2q0l_A TRXR, thioredoxin reduc 98.8 3.8E-09 1.3E-13 88.5 6.7 56 4-71 245-305 (311)
58 4a5l_A Thioredoxin reductase; 98.8 6.9E-09 2.4E-13 86.9 6.4 51 8-71 257-308 (314)
59 1gte_A Dihydropyrimidine dehyd 98.8 2.5E-09 8.5E-14 104.5 4.2 52 8-72 452-505 (1025)
60 3r9u_A Thioredoxin reductase; 98.8 6E-09 2.1E-13 87.0 6.0 52 8-71 255-308 (315)
61 3lzw_A Ferredoxin--NADP reduct 98.8 7.4E-09 2.5E-13 87.1 6.5 59 3-72 253-312 (332)
62 4g6h_A Rotenone-insensitive NA 98.8 1.1E-08 3.8E-13 92.7 7.3 55 7-72 342-398 (502)
63 2q7v_A Thioredoxin reductase; 98.7 9.8E-09 3.4E-13 86.7 6.2 56 4-72 253-309 (325)
64 3f8d_A Thioredoxin reductase ( 98.7 8.8E-09 3E-13 86.1 5.7 58 4-71 255-313 (323)
65 3ab1_A Ferredoxin--NADP reduct 98.7 7E-09 2.4E-13 89.0 5.2 58 4-72 267-325 (360)
66 2zbw_A Thioredoxin reductase; 98.7 1.5E-08 5E-13 85.8 6.7 58 4-72 256-314 (335)
67 2vdc_G Glutamate synthase [NAD 98.7 1.2E-08 4.1E-13 91.5 5.3 56 4-72 384-441 (456)
68 1fl2_A Alkyl hydroperoxide red 98.7 2.3E-08 7.8E-13 83.7 6.6 55 5-72 247-302 (310)
69 3sx6_A Sulfide-quinone reducta 98.6 1.1E-07 3.6E-12 84.3 9.4 62 8-71 277-340 (437)
70 3fbs_A Oxidoreductase; structu 98.6 2.4E-08 8.1E-13 82.6 4.8 56 4-71 230-288 (297)
71 3h28_A Sulfide-quinone reducta 98.6 6.7E-08 2.3E-12 85.3 7.1 63 8-72 265-330 (430)
72 3itj_A Thioredoxin reductase 1 98.6 6.7E-08 2.3E-12 81.3 6.3 51 9-71 279-331 (338)
73 2a87_A TRXR, TR, thioredoxin r 98.6 8.6E-08 2.9E-12 81.4 6.4 52 8-71 259-312 (335)
74 1vdc_A NTR, NADPH dependent th 98.5 9.4E-08 3.2E-12 80.7 6.5 52 8-71 266-319 (333)
75 4a9w_A Monooxygenase; baeyer-v 98.4 1.5E-07 5.1E-12 79.5 5.2 57 3-72 288-349 (357)
76 1hyu_A AHPF, alkyl hydroperoxi 98.4 2.3E-07 7.8E-12 84.3 6.6 54 5-71 458-512 (521)
77 3h8l_A NADH oxidase; membrane 98.4 2.4E-07 8.1E-12 81.1 4.7 57 4-72 273-333 (409)
78 1trb_A Thioredoxin reductase; 98.3 6.9E-07 2.4E-11 74.8 6.4 51 8-71 254-310 (320)
79 1cjc_A Protein (adrenodoxin re 98.1 1.3E-06 4.3E-11 78.3 3.2 53 8-72 337-392 (460)
80 3d1c_A Flavin-containing putat 98.0 1.8E-06 6.2E-11 73.7 3.1 60 5-74 277-338 (369)
81 1lqt_A FPRA; NADP+ derivative, 97.9 3.5E-06 1.2E-10 75.3 3.1 54 8-73 330-385 (456)
82 1y56_A Hypothetical protein PH 97.8 1.1E-05 3.8E-10 72.6 3.5 56 4-73 317-375 (493)
83 2xve_A Flavin-containing monoo 97.5 6.9E-05 2.4E-09 66.8 4.8 55 5-74 281-340 (464)
84 2e5v_A L-aspartate oxidase; ar 97.3 0.00013 4.3E-09 65.3 4.1 50 16-72 316-370 (472)
85 1o94_A Tmadh, trimethylamine d 97.1 0.00022 7.6E-09 67.2 3.3 41 20-73 657-698 (729)
86 2gag_A Heterotetrameric sarcos 97.1 0.00035 1.2E-08 67.9 4.5 44 16-72 392-441 (965)
87 2cul_A Glucose-inhibited divis 96.5 0.0023 7.7E-08 51.4 4.1 34 26-72 196-229 (232)
88 2gv8_A Monooxygenase; FMO, FAD 96.4 0.0031 1.1E-07 55.5 5.2 46 16-74 312-361 (447)
89 3k30_A Histamine dehydrogenase 96.4 0.003 1E-07 59.0 5.0 34 27-73 640-673 (690)
90 3fpz_A Thiazole biosynthetic e 96.0 0.0005 1.7E-08 58.0 -2.3 55 9-71 265-321 (326)
91 3s5w_A L-ornithine 5-monooxyge 95.7 0.0045 1.5E-07 54.4 2.5 48 17-71 392-445 (463)
92 1kf6_A Fumarate reductase flav 95.3 0.014 4.9E-07 53.6 4.8 49 16-71 359-412 (602)
93 3gyx_A Adenylylsulfate reducta 94.6 0.036 1.2E-06 51.7 5.2 39 23-71 446-485 (662)
94 1chu_A Protein (L-aspartate ox 93.8 0.085 2.9E-06 47.8 5.8 50 16-72 354-408 (540)
95 1jnr_A Adenylylsulfate reducta 93.4 0.096 3.3E-06 48.4 5.6 39 23-71 425-464 (643)
96 2bs2_A Quinol-fumarate reducta 92.8 0.13 4.6E-06 47.8 5.7 23 16-38 372-395 (660)
97 3kkj_A Amine oxidase, flavin-c 92.5 0.12 4E-06 39.8 4.1 38 22-72 287-325 (336)
98 3nlc_A Uncharacterized protein 91.9 0.1 3.5E-06 47.6 3.6 41 19-71 497-539 (549)
99 2gqf_A Hypothetical protein HI 90.9 0.27 9.2E-06 42.7 5.1 45 21-72 353-400 (401)
100 2wdq_A Succinate dehydrogenase 87.6 0.23 7.9E-06 45.4 2.3 23 16-38 357-390 (588)
101 1qo8_A Flavocytochrome C3 fuma 86.4 0.65 2.2E-05 42.0 4.5 49 17-71 503-560 (566)
102 1d4d_A Flavocytochrome C fumar 81.5 1.1 3.9E-05 40.5 3.9 50 17-72 508-567 (572)
103 1y0p_A Fumarate reductase flav 80.0 1.4 4.6E-05 39.8 3.9 50 17-72 508-566 (571)
104 2h88_A Succinate dehydrogenase 79.9 1.2 4.2E-05 41.0 3.6 50 17-71 368-429 (621)
105 4at0_A 3-ketosteroid-delta4-5a 76.5 1.9 6.6E-05 38.2 3.8 50 17-72 450-508 (510)
106 2i0z_A NAD(FAD)-utilizing dehy 75.5 2.2 7.5E-05 37.1 3.8 48 17-71 387-440 (447)
107 3oz2_A Digeranylgeranylglycero 74.8 3.4 0.00012 34.2 4.7 48 17-71 263-312 (397)
108 2zxi_A TRNA uridine 5-carboxym 66.7 5.4 0.00018 36.9 4.4 38 21-71 380-419 (637)
109 3cp8_A TRNA uridine 5-carboxym 65.6 6.4 0.00022 36.4 4.7 36 23-71 371-408 (641)
110 3v76_A Flavoprotein; structura 65.4 4.6 0.00016 35.0 3.5 46 17-69 365-416 (417)
111 3ces_A MNMG, tRNA uridine 5-ca 61.2 8.9 0.0003 35.6 4.8 69 21-109 375-445 (651)
112 1rp0_A ARA6, thiazole biosynth 58.6 3 0.0001 33.9 1.0 41 24-72 228-272 (284)
113 1w4x_A Phenylacetone monooxyge 58.6 6.2 0.00021 35.2 3.2 37 26-72 426-463 (542)
114 3nrn_A Uncharacterized protein 48.5 18 0.00061 30.6 4.4 33 26-70 370-403 (421)
115 3atr_A Conserved archaeal prot 38.9 33 0.0011 29.4 4.6 37 28-71 281-317 (453)
116 2yg5_A Putrescine oxidase; oxi 35.1 44 0.0015 28.3 4.8 38 24-71 410-448 (453)
117 3cgv_A Geranylgeranyl reductas 33.0 50 0.0017 27.1 4.7 38 27-71 275-312 (397)
118 3ka7_A Oxidoreductase; structu 32.0 35 0.0012 28.6 3.5 36 26-72 389-425 (425)
119 3g5s_A Methylenetetrahydrofola 31.7 33 0.0011 30.2 3.3 37 22-71 320-358 (443)
120 3nix_A Flavoprotein/dehydrogen 31.4 55 0.0019 27.3 4.7 37 28-71 287-323 (421)
121 3rp8_A Flavoprotein monooxygen 31.4 48 0.0016 27.7 4.3 37 28-71 300-336 (407)
122 2e1m_C L-glutamate oxidase; L- 30.1 57 0.002 24.5 4.2 37 26-73 115-151 (181)
123 4dgk_A Phytoene dehydrogenase; 28.8 45 0.0015 28.7 3.8 34 26-71 455-488 (501)
124 2gmh_A Electron transfer flavo 27.6 65 0.0022 28.9 4.7 38 27-71 345-382 (584)
125 2x3n_A Probable FAD-dependent 26.8 50 0.0017 27.4 3.6 37 28-71 285-321 (399)
126 1b0n_B Protein (SINI protein); 26.1 46 0.0016 20.6 2.4 28 158-185 12-39 (57)
127 3e1t_A Halogenase; flavoprotei 25.5 60 0.002 28.4 4.0 37 28-71 295-331 (512)
128 3c4a_A Probable tryptophan hyd 24.0 80 0.0027 26.1 4.4 37 28-71 261-297 (381)
129 3qj4_A Renalase; FAD/NAD(P)-bi 23.8 78 0.0027 25.6 4.2 33 27-72 308-340 (342)
130 1k0i_A P-hydroxybenzoate hydro 23.6 62 0.0021 26.7 3.6 37 28-71 278-314 (394)
131 1s3e_A Amine oxidase [flavin-c 23.4 90 0.0031 27.1 4.8 38 24-71 413-451 (520)
132 3i3l_A Alkylhalidase CMLS; fla 22.7 79 0.0027 28.5 4.3 38 27-71 306-343 (591)
133 2vou_A 2,6-dihydroxypyridine h 22.4 86 0.0029 26.1 4.3 38 28-72 298-335 (397)
134 3alj_A 2-methyl-3-hydroxypyrid 22.1 51 0.0017 27.3 2.7 38 28-72 280-317 (379)
135 1yvv_A Amine oxidase, flavin-c 21.4 1E+02 0.0034 24.6 4.4 33 27-72 293-325 (336)
136 1b37_A Protein (polyamine oxid 21.2 96 0.0033 26.5 4.4 37 26-72 420-456 (472)
137 4hb9_A Similarities with proba 21.2 77 0.0026 26.0 3.7 38 27-71 309-346 (412)
138 3c96_A Flavin-containing monoo 20.9 70 0.0024 26.8 3.4 37 28-71 302-338 (410)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2e-38 Score=291.09 Aligned_cols=198 Identities=39% Similarity=0.691 Sum_probs=137.1
Q ss_pred ccccccCCeeccCCCc-eecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCc
Q psy11186 3 PAVSNAGVKVIPENAK-IDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDY 80 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~-I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~ 80 (212)
++|+++|++++ ++|. |.||++| ||.|+|||+|||+. +.|+|+|.|.+||+++++|++|......++
T Consensus 324 L~le~~gv~~~-~~~~~i~vd~~~~Ts~p~IyAiGDv~~-----------~~p~La~~A~~eg~~aa~~i~g~~~~~~d~ 391 (542)
T 4b1b_A 324 LNLESLNMNVN-KSNNKIIADHLSCTNIPSIFAVGDVAE-----------NVPELAPVAIKAGEILARRLFKDSDEIMDY 391 (542)
T ss_dssp GCGGGTTCCEE-TTTTEECCCTTSBCSSTTEEECTTSBT-----------TCCCCHHHHHHHHHHHHHHHHSCCCCCCCC
T ss_pred cCcccceeeec-ccCceEeccccccccCCCeEEeccccC-----------CchhHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 46888999998 5555 5888999 99999999999994 457899999999999999999987777899
Q ss_pred ccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeecccccccc--------------CCCCCceEEEEEEecCCCC
Q psy11186 81 QNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIP--------------QRNPQRCYLKVVCERAAPQ 146 (212)
Q Consensus 81 ~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~g~~klv~d~~~~g 146 (212)
..+|+++|++|++++||+||+||++++++.++.++...+.+...... ....+.||+|+++..++++
T Consensus 392 ~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~ 471 (542)
T 4b1b_A 392 SYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDN 471 (542)
T ss_dssp SSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTT
T ss_pred CCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCC
Confidence 99999999999999999999999999887778776555443322110 0013679999986316789
Q ss_pred eEEEEEEECccHHHHHHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCCCCCC
Q psy11186 147 KVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212 (212)
Q Consensus 147 ~ilGa~~vg~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~~~~~ 212 (212)
+|||+|++|++|.|+|+.+++||++++|+++|.+.+++|||++|.|.+++++.+...++.+.+||+
T Consensus 472 ~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~t~~~g~~~~~~~~c~ 537 (542)
T 4b1b_A 472 RVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTISSGLSYAAKGGCG 537 (542)
T ss_dssp BEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC-------------------------------
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHHHHHcCCCHHHccCCC
Confidence 999999999999999999999999999999999999999999999999999987878999999995
No 2
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.1e-37 Score=281.57 Aligned_cols=197 Identities=53% Similarity=0.961 Sum_probs=173.8
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+|+++|+++++++|+|.||++| |+.|+|||+|||+. +.+.+++.|.+||+++|+||+|......++..
T Consensus 321 ~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~-----------g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~ 389 (519)
T 3qfa_A 321 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILE-----------DKVELTPVAIQAGRLLAQRLYAGSTVKCDYEN 389 (519)
T ss_dssp CSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBS-----------SSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTT
T ss_pred ChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccC-----------CCCccHHHHHHHHHHHHHHHcCCCCccCCCCc
Confidence 4788999986236899999999 99999999999995 56889999999999999999987666678999
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecC-CCCeEEEEEEECccHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERA-APQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~-~~g~ilGa~~vg~~a~~~ 161 (212)
+|+++|++|++++||+||+||++.++..++++....+.+..+....+..+.+++|+++| + ++++|||+|++|+++.|+
T Consensus 390 ~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~-~~~~~~ilGa~i~g~~a~e~ 468 (519)
T 3qfa_A 390 VPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICN-TKDNERVVGFHVLGPNAGEV 468 (519)
T ss_dssp CCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEE-TTTTCEEEEEEEESTTHHHH
T ss_pred CcEEEECCCceEEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEe-cCCCCEEEEEEEECCCHHHH
Confidence 99999999999999999999998754346777776776655544433236899999999 7 489999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCCCCCC
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~~~~~ 212 (212)
|+.+++||++++|+++|.+.+++|||++|.+..+..+++.+.++.+.-||.
T Consensus 469 i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~~~~~~~~~~~~~~~~~ 519 (519)
T 3qfa_A 469 TQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGSCG 519 (519)
T ss_dssp HHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGGCCCBTTTTCCCCCCCTTC
T ss_pred HHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHhhhhcCCChhhccCCC
Confidence 999999999999999999999999999999999999999988999999995
No 3
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.6e-36 Score=272.59 Aligned_cols=186 Identities=65% Similarity=1.057 Sum_probs=163.5
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+|+++|++++ + |+|.||++| |+.|+|||+|||+. +.+.+++.|.+||+++|+||+|......++..
T Consensus 295 ~l~~~gl~~~-~-G~i~vd~~~~t~~~~IyA~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~ 361 (483)
T 3dgh_A 295 NLPNAGVTVQ-K-DKIPVDSQEATNVANIYAVGDIIY-----------GKPELTPVAVLAGRLLARRLYGGSTQRMDYKD 361 (483)
T ss_dssp TGGGTTCCCB-T-TBBCCCTTCBCSSTTEEECSTTBT-----------TSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTT
T ss_pred CchhcCcccc-C-CEEEECcCCccCCCCEEEEEcccC-----------CCCccHHHHHHHHHHHHHHHcCCCCCcCCCCC
Confidence 3588999998 5 999999999 99999999999985 56889999999999999999987666678899
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCC-CCeEEEEEEECccHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAA-PQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~-~g~ilGa~~vg~~a~~~ 161 (212)
+|+++|++|++++||+||+||+++++...+++....+.+..+++.....+.+|+|+++| ++ +++|||+|++|+++.|+
T Consensus 362 ~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~-~~~~~~ilG~~~~g~~a~e~ 440 (483)
T 3dgh_A 362 VATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAE-RHGDQRVYGLHYIGPVAGEV 440 (483)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEE-SSTTCBEEEEEEEETTHHHH
T ss_pred CCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEe-cCCCCEEEEEEEECCCHHHH
Confidence 99999999999999999999998755346777766676655544433246899999999 76 89999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCC
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGE 203 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~ 203 (212)
|+.+++||++|+|+++|.+.+++|||++|.+.++..+|+++.
T Consensus 441 i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~ 482 (483)
T 3dgh_A 441 IQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGL 482 (483)
T ss_dssp HHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGCCCBTTTBT
T ss_pred HHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHhHHhccC
Confidence 999999999999999999999999999999999988876644
No 4
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2.4e-36 Score=273.27 Aligned_cols=193 Identities=55% Similarity=1.007 Sum_probs=166.9
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+|+++|+++++++|+|.||++| |+.|+|||+|||+. +.+.+++.|.+||+++|.||+|......++..
T Consensus 293 ~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~ 361 (488)
T 3dgz_A 293 NLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAE-----------GRPELTPTAIKAGKLLAQRLFGKSSTLMDYSN 361 (488)
T ss_dssp TGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBT-----------TCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTT
T ss_pred CccccCcEecCCCCeEeECCCCccCCCCEEEeEEecC-----------CCCcchhHHHHHHHHHHHHHcCCCCccCCCCC
Confidence 3788899986237899999999 99999999999985 56789999999999999999987666678889
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecC-CCCeEEEEEEECccHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERA-APQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~-~~g~ilGa~~vg~~a~~~ 161 (212)
+|+++|++|++++||+||+||+++++...+.+....+.+..+.+...+.+.+++|+++| + ++++|||+|++|+++.|+
T Consensus 362 ~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~-~~~~~~ilG~~~~g~~a~e~ 440 (488)
T 3dgz_A 362 VPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCM-REPPQLVLGLHFLGPNAGEV 440 (488)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEE-SSTTCBEEEEEEEETTHHHH
T ss_pred CCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEe-cCCCCEEEEEEEECCCHHHH
Confidence 99999999999999999999998754346777766666655544433236899999998 6 799999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCC
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQ 208 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~ 208 (212)
|+.+++||++++|+++|.+.+++|||++|.+..+...|+++.++++.
T Consensus 441 i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~~~ 487 (488)
T 3dgz_A 441 TQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLEPTVT 487 (488)
T ss_dssp HHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTCCEETTTTCCCC--
T ss_pred HHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHHHhhcCCCcccC
Confidence 99999999999999999999999999999999999999888777654
No 5
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=2.4e-35 Score=265.89 Aligned_cols=177 Identities=38% Similarity=0.663 Sum_probs=159.5
Q ss_pred ccccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC-CCcCCCc
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN-GTTQMDY 80 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~-~~~~~~~ 80 (212)
++++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|. .....++
T Consensus 298 l~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 364 (478)
T 3dk9_A 298 LSLNKLGIQTD-DKGHIIVDEFQNTNVKGIYAVGDVC------------GKALLTPVAIAAGRKLAHRLFEYKEDSKLDY 364 (478)
T ss_dssp SCGGGGTCCBC-TTCCBCCCTTCBCSSTTEEECGGGG------------CSSCCHHHHHHHHHHHHHHHHSCCTTCCCCC
T ss_pred CCchhcCCeeC-CCCCEeeCCCcccCCCCEEEEEecC------------CCCccHhHHHHHHHHHHHHHcCCCCcccCCC
Confidence 34788999998 79999999999 9999999999999 67889999999999999999987 3445788
Q ss_pred ccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHH
Q psy11186 81 QNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGE 160 (212)
Q Consensus 81 ~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~ 160 (212)
..+|+++|++|++++||+||+||++.++..++.+.+.++.+..++...+ .+.|++|++++ +++++|||+|++|+++.|
T Consensus 365 ~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~k~i~~-~~~~~ilG~~~~g~~a~e 442 (478)
T 3dk9_A 365 NNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKR-KTKCVMKMVCA-NKEEKVVGIHMQGLGCDE 442 (478)
T ss_dssp TTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSS-CCCEEEEEEEE-TTTTEEEEEEEESTTHHH
T ss_pred CCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCcchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHH
Confidence 8999999999999999999999999876557887777888777766544 47899999999 899999999999999999
Q ss_pred HHHHHHHHHHCCCCHHHHhhcccCCCCchhhHHH
Q psy11186 161 VIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 194 (212)
Q Consensus 161 ~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~ 194 (212)
+|+.+++||++|+|+++|.+.+++|||++|.+..
T Consensus 443 ~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 476 (478)
T 3dk9_A 443 MLQGFAVAVKMGATKADFDNTVAIHPTSSEELVT 476 (478)
T ss_dssp HHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGS
T ss_pred HHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHh
Confidence 9999999999999999999999999999999864
No 6
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2e-35 Score=266.03 Aligned_cols=186 Identities=26% Similarity=0.407 Sum_probs=165.4
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|+||+|... ..++..
T Consensus 286 ~~~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~ 351 (476)
T 3lad_A 286 LAADSGVTLD-ERGFIYVDDYCATSVPGVYAIGDVV------------RGAMLAHKASEEGVVVAERIAGHKA-QMNYDL 351 (476)
T ss_dssp CSSCCSCCBC-TTSCBCCCTTSBCSSTTEEECGGGS------------SSCCCHHHHHHHHHHHHHHHHHCCC-CCCTTC
T ss_pred CccccCcccc-CCCCEeeCCCcccCCCCEEEEEccC------------CCcccHHHHHHHHHHHHHHhcCCCc-ccCCCC
Confidence 4788999998 78999999999 9999999999999 5778999999999999999998653 467888
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|++++||+||+||++.+. ++.+..+++....++.... .+.+++|+++| +++++|||+|++|+++.|+|
T Consensus 352 ~p~~~~~~~~~a~vGlte~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i 427 (476)
T 3lad_A 352 IPAVIYTHPEIAGVGKTEQALKAEGV--AINVGVFPFAASGRAMAAN-DTAGFVKVIAD-AKTDRVLGVHVIGPSAAELV 427 (476)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHHT-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHH
T ss_pred CCEEEECcCCEEEeeCCHHHHHhcCC--CEEEEEEeccccchheecC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 99999999999999999999998864 6777777777666655444 37899999999 89999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCCC
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQS 209 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~~ 209 (212)
+.+++||++|+|+++|.+.+++|||++|.+.++++. +.+++.+..
T Consensus 428 ~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~--~~~~~~~~~ 472 (476)
T 3lad_A 428 QQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALA--VSGHAIHVA 472 (476)
T ss_dssp HHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHHH--HTTCCTTCC
T ss_pred HHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHH--Hhccccccc
Confidence 999999999999999999999999999999999987 666776653
No 7
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.6e-35 Score=264.82 Aligned_cols=176 Identities=34% Similarity=0.558 Sum_probs=160.2
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|..||+++|.||+|......++..+
T Consensus 275 l~~~g~~~~-~~G~i~vd~~~~t~~~~iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 341 (463)
T 4dna_A 275 LEAAGVRTN-ELGAIIVDAFSRTSTPGIYALGDVT------------DRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLI 341 (463)
T ss_dssp TGGGTCCBC-TTSCBCCCTTCBCSSTTEEECSGGG------------SSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCC
T ss_pred ccccCceEC-CCCCEeECcCCCCCCCCEEEEEecC------------CCCCChHHHHHHHHHHHHHHcCCCCcccCCCCC
Confidence 788999998 78999999999 9999999999999 567899999999999999999876656788899
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|++++||+||+||++.+ .++++...++.+..++...+ .+.+++|+++| +++++|||+|++|+++.|+|+
T Consensus 342 p~~~~~~p~~a~vG~te~~a~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~ 417 (463)
T 4dna_A 342 ATAVFSQPEIGTVGITEEEAARKF--QEIEVYRAEFRPMKATLSGR-KEKTIMKLVVN-AADRKVVGAHILGHDAGEMAQ 417 (463)
T ss_dssp CEEECSSSCEEEEECCHHHHHHHS--SEEEEEEEEECCTTHHHHCC-CCCEEEEEEEE-TTTCBEEEEEEESTTHHHHHH
T ss_pred CEEEECCCCeEEecCCHHHHHHcC--CCeEEEEEeccccchhhcCC-CceEEEEEEEE-CCCCEEEEEEEECCCHHHHHH
Confidence 999999999999999999999886 36777777887777665444 47899999999 899999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHh
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTI 197 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~ 197 (212)
.+++||++++|+++|.+.+++|||++|.+..++.
T Consensus 418 ~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 451 (463)
T 4dna_A 418 LLGISLRAGCTKDDFDRTMAVHPTAAEELVTMYQ 451 (463)
T ss_dssp HHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCCS
T ss_pred HHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHhh
Confidence 9999999999999999999999999999998874
No 8
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.7e-35 Score=265.57 Aligned_cols=177 Identities=26% Similarity=0.397 Sum_probs=160.2
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|..||+++|.||+|... ..++..
T Consensus 306 ~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~ 371 (491)
T 3urh_A 306 GLAKAGVVLD-SRGRVEIDRHFQTSIAGVYAIGDVV------------RGPMLAHKAEDEGVAVAEIIAGQAG-HVNYDV 371 (491)
T ss_dssp CHHHHTCCBC-TTSCBCCCTTCBCSSTTEEECGGGS------------SSCCCHHHHHHHHHHHHHHHTTSCC-CCCTTC
T ss_pred CchhcCceEC-CCCCEeECCCCCCCCCCEEEEEecC------------CCccchhHHHHHHHHHHHHHcCCCc-ccCCCC
Confidence 3778899998 78999999999 9999999999999 5678999999999999999998653 467888
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|++++||+||+||++.+. ++.+...++....++...+ .+.|++|+++| +++++|||+|++|+++.|+|
T Consensus 372 ~p~~~~~~p~~a~vGlte~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~g~~k~i~~-~~~~~ilG~~~~g~~a~e~i 447 (491)
T 3urh_A 372 IPGVVYTQPEVASVGKTEEELKAAGV--AYKIGKFPFTANGRARAML-QTDGFVKILAD-KETDRVLGGHIIGFGAGEMI 447 (491)
T ss_dssp CCEEECSSSCEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEESTTHHHHH
T ss_pred CCEEEEccCCeEEEeCCHHHHHhCCC--CEEEEEEecCcchhhhcCC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 99999999999999999999998864 7888777777766665544 37899999999 89999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
+.+++||++|+|+++|.+.+++|||++|.+.++++.
T Consensus 448 ~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 483 (491)
T 3urh_A 448 HEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALS 483 (491)
T ss_dssp HHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999876
No 9
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.7e-35 Score=263.59 Aligned_cols=183 Identities=17% Similarity=0.278 Sum_probs=154.8
Q ss_pred ccccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCc-C
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTT-Q 77 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~-~ 77 (212)
+.++++|++++ ++|+|.||++| ||.|+|||+|||+. ..+..++. +++++.|.+||+++|+||+|.... .
T Consensus 243 ~~~~~~gl~~~-~~G~I~vd~~~~Ts~p~IyA~GDva~-----~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~ 316 (437)
T 4eqs_A 243 KFIESSNIKLD-RKGFIPVNDKFETNVPNIYAIGDIAT-----SHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEF 316 (437)
T ss_dssp GGGTTSSCCCC-TTSCEECCTTCBCSSTTEEECGGGEE-----EEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCC
T ss_pred HHHHhhhhhhc-cCCcEecCCCccCCCCCEEEEEEccC-----cccccCCccccchhHHHHHHHHHHHHHHHcCCCCccc
Confidence 46888999999 79999999999 99999999999996 33333333 468999999999999999987643 3
Q ss_pred CCcccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc
Q psy11186 78 MDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN 157 (212)
Q Consensus 78 ~~~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~ 157 (212)
.++..+|++.|++|++++||+||+||++. ++++.++++....+++.. .+.|++|+++| +++++|||+|++|++
T Consensus 317 ~~~~~~~~~~~~~p~ia~vGlte~~a~~~----~~~~~~~~~~~~~~~~~~--~~~g~~Kli~d-~~~~~ilGa~~~g~~ 389 (437)
T 4eqs_A 317 KGFLGNNIVKFFDYTFASVGVKPNELKQF----DYKMVEVTQGAHANYYPG--NSPLHLRVYYD-TSNRQILRAAAVGKE 389 (437)
T ss_dssp CCBCCCEEEEETTEEEEEEESCGGGGGGS----CEEEEEEEEESSCTTSSS--CCEEEEEEEEE-TTTCBEEEEEEEESS
T ss_pred ccceeEEeeeeccceEEEeeCCHHHHHhC----CceEEEEecCCchhhcCC--CCcEEEEEEEE-CCCCEEEEEEEECcC
Confidence 56778899999999999999999999764 466666666555556553 47899999999 899999999999986
Q ss_pred -HHHHHHHHHHHHHCCCCHHHHhh-cccCCCCchhhHHHHHhh
Q psy11186 158 -AGEVIQGYAAAVKCGLTFETLES-TVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 158 -a~~~i~~~~~ai~~~~t~~~l~~-~~~~~P~~~e~~~~~~~~ 198 (212)
+.|+|+.+++||++++|++||.+ .++|||+++++++.+.++
T Consensus 390 ~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~~d~v~~a 432 (437)
T 4eqs_A 390 GADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHPKDLINMI 432 (437)
T ss_dssp SHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCchHHHHHHH
Confidence 89999999999999999999999 577899999998877654
No 10
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=9.1e-35 Score=261.61 Aligned_cols=178 Identities=22% Similarity=0.266 Sum_probs=161.1
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC--CCcCCCc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN--GTTQMDY 80 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~--~~~~~~~ 80 (212)
+|+++|++++ ++| |.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|. .....++
T Consensus 277 ~l~~~gl~~~-~~G-i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 342 (466)
T 3l8k_A 277 GAREIGLSIS-KTG-IVVDETMKTNIPNVFATGDAN------------GLAPYYHAAVRMSIAAANNIMANGMPVDYVDV 342 (466)
T ss_dssp TTGGGTCCBC-SSS-BCCCTTCBCSSTTEEECGGGT------------CSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCS
T ss_pred chhhcCceeC-CCC-EeECCCccCCCCCEEEEEecC------------CCCccHhHHHHHHHHHHHHHhCCCCCccccCC
Confidence 4789999998 789 9999999 9999999999999 45789999999999999999986 5555788
Q ss_pred ccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHH
Q psy11186 81 QNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGE 160 (212)
Q Consensus 81 ~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~ 160 (212)
..+|+++|++|++++||+||++|++.+. ++++...++....++...+ .+.|++|+++| +++++|||+|++|+++.|
T Consensus 343 ~~~p~~~~~~~~~a~vG~te~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~g~~k~i~~-~~~~~ilG~~~~g~~a~e 418 (466)
T 3l8k_A 343 KSIPVTIYTIPSLSYVGILPSKARKMGI--EIVEAEYNMEEDVSAQIYG-QKEGVLKLIFE-RGSMRLIGAWMIGVHSQY 418 (466)
T ss_dssp TTSCEEECSSSCEEEEECCHHHHHHHTC--CEEEEEEEGGGSHHHHHHT-CCCCEEEEEEE-TTTCBEEEEEEESTTHHH
T ss_pred CCCcEEEECCCCeEEecCCHHHHHhCCC--CEEEEEEEcccChhheecC-CCeEEEEEEEE-CCCCEEEEEEEECCCHHH
Confidence 8999999999999999999999998864 6888877887766655444 37899999999 889999999999999999
Q ss_pred HHHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhh
Q psy11186 161 VIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITK 199 (212)
Q Consensus 161 ~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~ 199 (212)
+|+.+++||++|+|+++|.+.+++|||++|.+..+++.+
T Consensus 419 ~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~ 457 (466)
T 3l8k_A 419 LINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTARKV 457 (466)
T ss_dssp HHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999874
No 11
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.6e-35 Score=264.15 Aligned_cols=188 Identities=21% Similarity=0.298 Sum_probs=160.1
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|......++..+
T Consensus 286 l~~~gl~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~------------~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 352 (499)
T 1xdi_A 286 LERVGIQLG-RGNYLTVDRVSRTLATGIYAAGDCT------------GLLPLASVAAMQGRIAMYHALGEGVSPIRLRTV 352 (499)
T ss_dssp TTTTTCCCB-TTTBCCCCSSSBCSSTTEEECSGGG------------TSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGC
T ss_pred chhcCceEC-CCCCEEECCCcccCCCCEEEEeccC------------CCcccHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence 788999998 78999999999 9999999999999 466789999999999999999864345678889
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|++++||+++.+|+..+. ++++...++....+....+ .+.+|+|++++ +++++|||++++|+++.++|+
T Consensus 353 p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~g~~k~~~~-~~~~~ilG~~~~g~~a~~~i~ 428 (499)
T 1xdi_A 353 AATVFTRPEIAAVGVPQSVIDAGSV--AARTIMLPLRTNARAKMSE-MRHGFVKIFCR-RSTGVVIGGVVVAPIASELIL 428 (499)
T ss_dssp EEEECSSSEEEEEESCHHHHHHTSS--CEEEEEEESTTSHHHHHTT-CSSCEEEEEEE-TTTCBEEEEEEEETTHHHHHH
T ss_pred cEEEEecCCceEeCCCHHHHHhCCC--CEEEEEEecCcccceeecC-CCceEEEEEEE-CCCCEEEEEEEECCchHHHHH
Confidence 9999999999999999999998764 6887777777666655443 37899999999 889999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCCCCCC
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~~~~~ 212 (212)
.+++||++++|+++|.+.+++|||++|.+..+++. ...+ ..++||.
T Consensus 429 ~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~--~~~~-~~~~~~~ 474 (499)
T 1xdi_A 429 PIAVAVQNRITVNELAQTLAVYPSLSGSITEAARR--LMAH-DDLDCTA 474 (499)
T ss_dssp HHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHHH--HCC---------
T ss_pred HHHHHHHCCCCHHHHhcccccCCCchHHHHHHHHH--Hhcc-ccchhhH
Confidence 99999999999999999999999999999999877 5443 6679984
No 12
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=7.6e-35 Score=269.38 Aligned_cols=195 Identities=49% Similarity=0.895 Sum_probs=166.0
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+. +.+.+++.|.+||+++|.||+|......++..+
T Consensus 402 ~~~~gl~~~-~~G~i~vd~~~~ts~~~VyA~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 469 (598)
T 2x8g_A 402 CETVGVKLD-KNGRVVCTDDEQTTVSNVYAIGDINA-----------GKPQLTPVAIQAGRYLARRLFAGATELTDYSNV 469 (598)
T ss_dssp CGGGCCCBC-TTSCBCCCTTSBCSSTTEEECGGGBT-----------TSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTC
T ss_pred chhcCceEC-CCCcEEeCCCCcCCCCCEEEEeeecC-----------CCCccHHHHHHhHHHHHHHHhcCCCcccCCCCC
Confidence 678899998 78999999999 99999999999974 567899999999999999999765556788899
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecC-CCCeEEEEEEECccHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERA-APQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~-~~g~ilGa~~vg~~a~~~i 162 (212)
|+++|++|+++++|+|+.+|++.++.+++++...++.+..+....+....+++|++++ + ++++|||+|++|+++.++|
T Consensus 470 p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~-~~~~~~ilG~~~~g~~a~~~i 548 (598)
T 2x8g_A 470 ATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCR-KSDNMRVLGLHVLGPNAGEIT 548 (598)
T ss_dssp CEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEE-TTTTTEEEEEEEESTTHHHHH
T ss_pred cEEEECCCceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEe-cCCCCEEEEEEEECCCHHHHH
Confidence 9999999999999999999988755345888777777766655443236799999998 6 5899999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCCCCCC
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQSCCS 212 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~~~~~ 212 (212)
+.+++||++++|+++|.+.+++|||++|.+..+++.+....++.+++||+
T Consensus 549 ~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~~~~~~~ 598 (598)
T 2x8g_A 549 QGYAVAIKMGATKADFDRTIGIHPTCSETFTTLHVTKKSGVSPIVSGCCG 598 (598)
T ss_dssp HHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCCBSTTCCCCCC-----
T ss_pred HHHHHHHHcCCCHHHHhhccccCCCHHHHHHHHHHhhhcccchhhcccCC
Confidence 99999999999999999999999999999999998654566888899995
No 13
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2.2e-34 Score=260.12 Aligned_cols=184 Identities=24% Similarity=0.374 Sum_probs=161.2
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|.. ..+++..+
T Consensus 293 ~~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~~~ 358 (482)
T 1ojt_A 293 AEKAGVAVT-DRGFIEVDKQMRTNVPHIYAIGDIV------------GQPMLAHKAVHEGHVAAENCAGHK-AYFDARVI 358 (482)
T ss_dssp GGGTTCCCC-TTSCCCCCTTSBCSSTTEEECGGGT------------CSSCCHHHHHHHHHHHHHHHTTCC-CCCCCCCC
T ss_pred hhhcCceeC-CCCCEeeCCCcccCCCCEEEEEccc------------CCCccHHHHHHHHHHHHHHHcCCC-ccCCCCCC
Confidence 688999998 67999999999 9999999999999 567899999999999999999864 44678888
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|++++||+|+++|++.+. ++.+...++....+....+ .+.+|+|+++| +++++|||+|++|+++.++|+
T Consensus 359 p~~~~~~~~~a~vG~te~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~e~i~ 434 (482)
T 1ojt_A 359 PGVAYTSPEVAWVGETELSAKASAR--KITKANFPWAASGRAIANG-CDKPFTKLIFD-AETGRIIGGGIVGPNGGDMIG 434 (482)
T ss_dssp CEEECSSSCEEEEECCHHHHHHHTC--CEEEEEEEGGGCHHHHHTT-CCSCEEEEEEE-TTTCBEEEEEEESTTHHHHHH
T ss_pred CEEEEcCCCeEEEeCCHHHHHhcCC--CEEEEEEEcCcchHHhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHH
Confidence 9999999999999999999998864 6777777776666654443 37899999999 889999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCCC
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQ 208 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~~ 208 (212)
.+++||++++|+++|.+.+++|||++|.+..+++. ..+++.+.
T Consensus 435 ~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~--~~~~~~~~ 477 (482)
T 1ojt_A 435 EVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEV--ALGTCTDL 477 (482)
T ss_dssp HHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHHH--HHTCCTTS
T ss_pred HHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHH--Hhcccccc
Confidence 99999999999999999999999999999999865 43444544
No 14
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.7e-34 Score=260.87 Aligned_cols=177 Identities=34% Similarity=0.581 Sum_probs=158.1
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|..||+++|.||+|......++..+
T Consensus 295 l~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 361 (484)
T 3o0h_A 295 LERAGVKVN-EFGAVVVDEKMTTNVSHIWAVGDVT------------GHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLI 361 (484)
T ss_dssp HHHHTCCBC-TTSCBCCCTTSBCSSTTEEECGGGG------------TSCCCHHHHHHHHHHHHHHHHC---CCCCCTTC
T ss_pred hhhcCceEC-CCCCEeECCCCCCCCCCEEEEEecC------------CCCcCHHHHHHHHHHHHHHHcCCCCCcCCCCCC
Confidence 678899998 78999999999 9999999999999 567899999999999999999876666788899
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|++++||+||++|++.+ .++++...++.+..++...+ .+.+++|+++| +++++|||+|++|+++.|+|+
T Consensus 362 p~~~~~~p~~a~vGlte~~a~~~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~ 437 (484)
T 3o0h_A 362 TTAVFSQPEIGTVGLSEEDALHRY--KRVEIYRTVFRPMRNVLSGS-PEKMFMKLVVD-GESRIVVGAHVLGENAGEIAQ 437 (484)
T ss_dssp CEEECCSSCEEEEECCHHHHHHHC--SEEEEEEEEECCHHHHHHTC-CCCEEEEEEEE-TTTCBEEEEEEESTTHHHHHH
T ss_pred cEEEECCCCEEEeeCCHHHHHHcC--CCEEEEEecCCcchhhccCC-CCcEEEEEEEE-CCCCEEEEEEEECcCHHHHHH
Confidence 999999999999999999999886 36777777787766655444 47899999999 899999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
.+++||++++|+++|.+.+++|||++|.+..++..
T Consensus 438 ~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 472 (484)
T 3o0h_A 438 LIGISLKGKLTKDIFDKTMAVHPTMSEELVTMYKP 472 (484)
T ss_dssp HHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCCSC
T ss_pred HHHHHHHCCCCHHHHhccccCCCChHHHHHHHhhh
Confidence 99999999999999999999999999999988743
No 15
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=5.1e-34 Score=258.67 Aligned_cols=180 Identities=19% Similarity=0.218 Sum_probs=160.0
Q ss_pred cccccCCeeccCCCceecC-CCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC-CCcCCCc
Q psy11186 4 AVSNAGVKVIPENAKIDSD-NEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN-GTTQMDY 80 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd-~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~-~~~~~~~ 80 (212)
+++++|++++ ++|+|.|| ++| |+.|+|||+|||+ +.+.+++.|.+||+++|.|+.+. .....++
T Consensus 280 ~l~~~gl~~~-~~G~i~vd~~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 346 (492)
T 3ic9_A 280 GLENTSIELD-KKNSPLFDELTLQTSVDHIFVAGDAN------------NTLTLLHEAADDGKVAGTNAGAYPVIAQGQR 346 (492)
T ss_dssp CGGGSCCCBC-TTCCBCCCTTTCBCSSTTEEECGGGG------------TSSCSHHHHHHHHHHHHHHHHHTTSCCEECC
T ss_pred ChhhcCCEEC-CCCCEeECcccccCCCCCEEEEEecC------------CCCccHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 3788999998 79999999 999 9999999999999 56789999999999999999973 3344677
Q ss_pred ccceeEEEcCCceeeecCCHHHHHHhhCC---CCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc
Q psy11186 81 QNVATTVFTPLEYGCVGLSEEKAEELYGA---DNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN 157 (212)
Q Consensus 81 ~~~~~~~~~~~~ia~vGlt~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~ 157 (212)
..+|++.|++|++++||+||+||++.++. .++++.+.++....++...+ .+.+++|+++| +++++|||+|++|++
T Consensus 347 ~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~-~~~g~~kli~~-~~~~~ilG~~~~g~~ 424 (492)
T 3ic9_A 347 RAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMG-KNKGLLNVYAD-RTSGEFLGAEMFGPA 424 (492)
T ss_dssp CCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEEETT
T ss_pred CCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCC
Confidence 78899999999999999999999988531 26888877888777765544 37899999999 899999999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 158 AGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
+.++|+.+++||++++|+++|.+.+++|||++|.+..+++.
T Consensus 425 a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~ 465 (492)
T 3ic9_A 425 AEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRD 465 (492)
T ss_dssp HHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765
No 16
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3.4e-34 Score=259.75 Aligned_cols=176 Identities=32% Similarity=0.566 Sum_probs=158.3
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|......++..
T Consensus 294 ~l~~~gl~~~-~~G~I~Vd~~~~t~~~~IyA~GD~~------------~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~ 360 (490)
T 1fec_A 294 QLEKAGVEVA-KNGAIKVDAYSKTNVDNIYAIGDVT------------DRVMLTPVAINEGAAFVDTVFANKPRATDHTK 360 (490)
T ss_dssp CGGGGTCCBC-TTSCBCCCTTCBCSSTTEEECGGGG------------CSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSS
T ss_pred CchhcCccCC-CCCCEEECCCCccCCCCEEEEeccC------------CCccCHHHHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 4788999998 78999999999 9999999999999 46789999999999999999986555678889
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEE-EEEEecCCCCeEEEEEEECccHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYL-KVVCERAAPQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-klv~d~~~~g~ilGa~~vg~~a~~~ 161 (212)
+|+++|++|++++||+++++|++.+ .++++...++.+..+.+... .+.+++ |++++ +++++|||+|++|+++.++
T Consensus 361 ~p~~~~~~~~~a~vG~~e~~a~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~kli~~-~~~~~ilG~~~~g~~a~~~ 436 (490)
T 1fec_A 361 VACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLMHNISGS-TYKKFMVRIVTN-HADGEVLGVHMLGDSSPEI 436 (490)
T ss_dssp CCEEECCSSCEEEEECCHHHHHHHC--SEEEEEEEEECCHHHHHHSC-TTCCEEEEEEEE-TTTTEEEEEEEESTTHHHH
T ss_pred ccEEEECCCCeEEEeCCHHHHHhcC--CCEEEEEeecChhhhhhhcC-CCeEEEEEEEEE-CCCCEEEEEEEECCCHHHH
Confidence 9999999999999999999998874 36777777777766666544 378999 99999 8899999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHH
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 196 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~ 196 (212)
|+.+++||++++|+++|.+.+++|||++|.+..++
T Consensus 437 i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 437 IQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp HHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred HHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999887
No 17
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=255.74 Aligned_cols=180 Identities=36% Similarity=0.686 Sum_probs=157.8
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCC---CcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNG---TTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~---~~~~~ 79 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|.. ....+
T Consensus 290 ~l~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 356 (479)
T 2hqm_A 290 GSENVGIKLN-SHDQIIADEYQNTNVPNIYSLGDVV------------GKVELTPVAIAAGRKLSNRLFGPEKFRNDKLD 356 (479)
T ss_dssp SGGGGTCCBC-TTSCBCCCTTCBCSSTTEEECGGGT------------TSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCC
T ss_pred ChhhcCceEC-CCCCEeECCCCccCCCCEEEEEecC------------CCcccHHHHHHHHHHHHHHhcCCCccCcccCC
Confidence 4788999998 78999999999 9999999999998 567899999999999999999864 33467
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHH
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAG 159 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~ 159 (212)
+..+|+.+|++|+++++|+++++|++.++.+++++...++....+....+ .+.+++|++++ +++++|||+|++|+++.
T Consensus 357 ~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~kli~~-~~~~~ilG~~~~g~~a~ 434 (479)
T 2hqm_A 357 YENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSE-KSPTRYKIVCA-GPNEKVVGLHIVGDSSA 434 (479)
T ss_dssp CTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSS-CCCEEEEEEEE-TTTTEEEEEEEESTTHH
T ss_pred CCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEEEEeccHHHHHhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHH
Confidence 77899999999999999999999998755345888877887777765433 37899999999 88999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 160 EVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 160 ~~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
++|+.+++||++++|+++|.+.+++|||++|.+..++..
T Consensus 435 ~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 473 (479)
T 2hqm_A 435 EILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMRGS 473 (479)
T ss_dssp HHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC--
T ss_pred HHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHHHHHh
Confidence 999999999999999999999999999999999877643
No 18
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=7.2e-34 Score=255.30 Aligned_cols=177 Identities=23% Similarity=0.325 Sum_probs=156.9
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcC-CCccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQ-MDYQN 82 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~-~~~~~ 82 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||.|..... .+|..
T Consensus 278 ~~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 344 (464)
T 2a8x_A 278 LDKAGVALT-DRKAIGVDDYMRTNVGHIYAIGDVN------------GLLQLAHVAEAQGVVAAETIAGAETLTLGDHRM 344 (464)
T ss_dssp HHHHTCCBC-TTSSBCCCTTSBCSSTTEEECGGGG------------CSSCSHHHHHHHHHHHHHHHHTCCCCCCCCGGG
T ss_pred chhcCCccC-CCCCEeECcCCccCCCCEEEeECcC------------CCccCHHHHHHHHHHHHHHhcCCCCcccCCCCC
Confidence 678899998 68999999999 9999999999999 467799999999999999999833344 67888
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|+++++|+++++|+..+. ++++...++....+....+ .+.+|+|++++ +++++|||+|++|+++.++|
T Consensus 345 ~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~e~i 420 (464)
T 2a8x_A 345 LPRATFCQPNVASFGLTEQQARNEGY--DVVVAKFPFTANAKAHGVG-DPSGFVKLVAD-AKHGELLGGHLVGHDVAELL 420 (464)
T ss_dssp SCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHHT-CCCCEEEEEEE-TTTTEEEEEEEEETTGGGGH
T ss_pred CCEEEECCCCeEEEcCCHHHHHhcCC--CEEEEEEEcchhhhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECcCHHHHH
Confidence 99999999999999999999998753 6877777777666654443 37899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
+.++.+|++++|+++|.+.+++|||++|.+..+++.
T Consensus 421 ~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 456 (464)
T 2a8x_A 421 PELTLAQRWDLTASELARNVHTHPTMSEALQECFHG 456 (464)
T ss_dssp HHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999865
No 19
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.8e-33 Score=252.96 Aligned_cols=182 Identities=23% Similarity=0.352 Sum_probs=159.9
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQE-KPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~-~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ + .+.+++.|.+||+++|.||.|.. ..+++..
T Consensus 283 l~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~ 348 (468)
T 2qae_A 283 LDKINVAKN-ERGFVKIGDHFETSIPDVYAIGDVV------------DKGPMLAHKAEDEGVACAEILAGKP-GHVNYGV 348 (468)
T ss_dssp HHHHTCCBC-TTSCBCCCTTSBCSSTTEEECGGGB------------SSSCSCHHHHHHHHHHHHHHHTTCC-CCCCTTS
T ss_pred chhcCCccC-CCCCEeECCCcccCCCCEEEeeccC------------CCCCccHhHHHHHHHHHHHHHcCCC-ccCCCCC
Confidence 678899998 78999999999 9999999999999 5 67799999999999999999864 3467888
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|++++||+++++|++.+. ++.+...++....+....+ .+.+++|++++ +++++|||+|++|+++.++|
T Consensus 349 ~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~kl~~~-~~~~~ilG~~~~g~~a~e~i 424 (468)
T 2qae_A 349 IPAVIYTMPEVASVGKSEDELKKEGV--AYKVGKFPFNANSRAKAVS-TEDGFVKVLVD-KATDRILGVHIVCTTAGELI 424 (468)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHH
T ss_pred CCEEEECCCceEEEeCCHHHHHhcCC--CEEEEEEecccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 89999999999999999999998753 6887777777666655443 37899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCC
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPT 206 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~ 206 (212)
+.+++||++++|+++|.+.+++|||++|.+..+++. ..+++.
T Consensus 425 ~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~--~~~~~~ 466 (468)
T 2qae_A 425 GEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMA--LFAKTI 466 (468)
T ss_dssp HHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHHH--HHSCCS
T ss_pred HHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHH--Hhcccc
Confidence 999999999999999999999999999999999866 434443
No 20
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.2e-33 Score=253.41 Aligned_cols=176 Identities=41% Similarity=0.669 Sum_probs=155.1
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcC-CCcc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQ-MDYQ 81 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~-~~~~ 81 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|..... .+|.
T Consensus 271 ~~~~~gl~~~-~~g~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 337 (450)
T 1ges_A 271 NLEAAGVKTN-EKGYIVVDKYQNTNIEGIYAVGDNT------------GAVELTPVAVAAGRRLSERLFNNKPDEHLDYS 337 (450)
T ss_dssp CHHHHTCCBC-TTSCBCCCTTSBCSSTTEEECSGGG------------TSCCCHHHHHHHHHHHHHHHHTTCTTCCCCCS
T ss_pred CchhcCceEC-CCCCEeECCCCccCCCCEEEEeccC------------CCCccHHHHHHHHHHHHHHHcCCCCcccCCCC
Confidence 4678899998 78999999999 9999999999999 567899999999999999999865444 6788
Q ss_pred cceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHH
Q psy11186 82 NVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 82 ~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~ 161 (212)
.+|+.+|++|+++++|+++++|++.++..++++...++.+..+..... .+.+++|++++ +++++|||+|++|+++.++
T Consensus 338 ~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~ 415 (450)
T 1ges_A 338 NIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTH-RQPCRMKLVCV-GSEEKIVGIHGIGFGMDEM 415 (450)
T ss_dssp SCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSS-CCEEEEEEEEE-TTTTEEEEEEEESTTHHHH
T ss_pred CCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHH
Confidence 899999999999999999999998753236787777777766655433 37899999999 8899999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHH
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 194 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~ 194 (212)
|+.+++||++++|+++|.+.+++|||++|.+..
T Consensus 416 i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 416 LQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp HHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred HHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 999999999999999999999999999998864
No 21
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.3e-33 Score=252.10 Aligned_cols=176 Identities=26% Similarity=0.396 Sum_probs=156.9
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||.|.. ..+++..+
T Consensus 286 ~~~~gl~~~-~~G~i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~ 351 (470)
T 1dxl_A 286 LDKIGVETD-KLGRILVNERFSTNVSGVYAIGDVI------------PGPMLAHKAEEDGVACVEYLAGKV-GHVDYDKV 351 (470)
T ss_dssp CTTTTCCBC-SSSCBCCCTTCBCSSTTEEECSTTS------------SSCCCHHHHHHHHHHHHHHHTTSC-CCCCTTSC
T ss_pred chhcCCccC-CCCCEeECcCCccCCCCEEEEeccC------------CCCccHHHHHHHHHHHHHHHcCCC-cCCCCCCC
Confidence 788899998 68999999999 9999999999999 456789999999999999999864 34678888
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|+++++|+++++|+..+. ++.+...++....+....+ .+.+|+|++++ +++++|||++++|+++.++|+
T Consensus 352 p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~ 427 (470)
T 1dxl_A 352 PGVVYTNPEVASVGKTEEQVKETGV--EYRVGKFPFMANSRAKAID-NAEGLVKIIAE-KETDKILGVHIMAPNAGELIH 427 (470)
T ss_dssp CEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHHS-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHHH
T ss_pred CEEEECCCceEEEcCCHHHHHhcCC--cEEEEEEecccchHHHhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHH
Confidence 9999999999999999999998753 6777777776666654443 36899999999 889999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
.++++|++++|+++|.+.+++|||++|.+..+++.
T Consensus 428 ~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 462 (470)
T 1dxl_A 428 EAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMA 462 (470)
T ss_dssp HHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999866
No 22
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.1e-33 Score=256.89 Aligned_cols=176 Identities=31% Similarity=0.554 Sum_probs=158.3
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|......+|..
T Consensus 298 ~l~~~gl~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~------------~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~ 364 (495)
T 2wpf_A 298 QLGNVGVKLT-PKGGVQVDEFSRTNVPNIYAIGDIT------------DRLMLTPVAINEGAALVDTVFGNKPRKTDHTR 364 (495)
T ss_dssp TGGGTTCCBC-TTSSBCCCTTCBCSSTTEEECGGGG------------CSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSS
T ss_pred chhhcCccCC-CCCCEEECCCCccCCCCEEEEeccC------------CCccCHHHHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 4788999998 78999999999 9999999999999 46779999999999999999986555578889
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceE-EEEEEecCCCCeEEEEEEECccHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCY-LKVVCERAAPQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~klv~d~~~~g~ilGa~~vg~~a~~~ 161 (212)
+|+++|++|++++||+++++|++.+ .++++...++.+..+.+... .+.++ +|++++ +++++|||+|++|+++.++
T Consensus 365 ~p~~~~~~~~~a~vGl~e~~a~~~~--~~~~v~~~~~~~~~~~~~~~-~~~~~~~klv~~-~~~~~ilG~~~~g~~a~~~ 440 (495)
T 2wpf_A 365 VASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSSFTPLMHNISGS-KYKKFVAKIVTN-HSDGTVLGVHLLGDGAPEI 440 (495)
T ss_dssp CEEEECCSSCEEEEECCHHHHHHHS--SEEEEEEEEECCTHHHHHSC-TTCCEEEEEEEE-TTTCBEEEEEEESTTHHHH
T ss_pred CCEEEECCCCeEEEeCCHHHHHhcC--CCEEEEEEecCchhhhhhcC-CCcEEEEEEEEE-CCCCEEEEEEEECCCHHHH
Confidence 9999999999999999999998874 46777777787766666554 37899 999999 8899999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHH
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 196 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~ 196 (212)
|+.++++|+.++|+++|.+.+++|||++|.+.+++
T Consensus 441 i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 441 IQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp HHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred HHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 99999999999999999999999999999998877
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.1e-33 Score=251.75 Aligned_cols=176 Identities=26% Similarity=0.450 Sum_probs=157.7
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|.. ...++..+
T Consensus 289 l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~ 354 (474)
T 1zmd_A 289 LEELGIELD-PRGRIPVNTRFQTKIPNIYAIGDVV------------AGPMLAHKAEDEGIICVEGMAGGA-VHIDYNCV 354 (474)
T ss_dssp HHHHTCCCC-TTSCCCCCTTCBCSSTTEEECGGGS------------SSCCCHHHHHHHHHHHHHHHTTCC-CCCCGGGC
T ss_pred chhcCCccC-CCCCEEECcCCccCCCCEEEeeecC------------CCCccHHHHHHHHHHHHHHhcCCC-CcCCCCCC
Confidence 678899998 68999999999 9999999999999 456799999999999999999864 34678889
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|+++++|+|+++|+..+. ++++...++....+..... .+.+|+|++++ +++++|||+|++|+++.++|+
T Consensus 355 p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~ 430 (474)
T 1zmd_A 355 PSVIYTHPEVAWVGKSEEQLKEEGI--EYKVGKFPFAANSRAKTNA-DTDGMVKILGQ-KSTDRVLGAHILGPGAGEMVN 430 (474)
T ss_dssp CEEECSSSEEEEEECCHHHHHHHTC--CEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHHH
T ss_pred CEEEECCCCeEEEeCCHHHHHhcCC--CEEEEEEecccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHH
Confidence 9999999999999999999998754 6888777777766655443 37899999999 889999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
.++++|+.++|+++|.+.+++|||++|.+..+++.
T Consensus 431 ~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 465 (474)
T 1zmd_A 431 EAALALEYGASCEDIARVCHAHPTLSEAFREANLA 465 (474)
T ss_dssp HHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999865
No 24
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.4e-33 Score=249.92 Aligned_cols=185 Identities=21% Similarity=0.287 Sum_probs=154.6
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+. ..+..+|+ +++++.|.+||+++|.||+|.......
T Consensus 248 l~~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~~-----~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~ 321 (449)
T 3kd9_A 248 LAKQLGVRIG-ETGAIWTNEKMQTSVENVYAAGDVAE-----TRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPG 321 (449)
T ss_dssp HHHHTTCCBC-TTSSBCCCTTCBCSSTTEEECSTTBC-----EEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCccCC-CCCCEEECCCCccCCCCEEEeeeeee-----eccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCC
Confidence 4678899998 78999999999 99999999999996 33433454 579999999999999999997655445
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHH
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAG 159 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~ 159 (212)
+..+|++.|++|+++++|+||+||++.+. ++.+..+.......+++ + .+.+++|+++| +++++|||+|++|+++.
T Consensus 322 ~~~~~~~~~~~~~~~~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~-~-~~~~~~kli~~-~~~~~ilG~~~~g~~a~ 396 (449)
T 3kd9_A 322 VLGTAVTKFMDVEIGKTGLTEMEALKEGY--DVRTAFIKASTRPHYYP-G-GREIWLKGVVD-NETNRLLGVQVVGSDIL 396 (449)
T ss_dssp BCCCEEEEETTEEEEEEECCHHHHHHTTC--CEEEEEEEEESSCTTST-T-CCEEEEEEEEE-TTTCBEEEEEEEESSCH
T ss_pred cccceEEEEcCcEEEEecCCHHHHHHCCC--ceEEEEEecCCccccCC-C-CceEEEEEEEE-CCCCEEEEEEEEChHHH
Confidence 55778999999999999999999998753 55555433322223332 2 47899999999 88999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHHhh-cccCCCCchhhHHHHHhhh
Q psy11186 160 EVIQGYAAAVKCGLTFETLES-TVGIHPTLAEEFTRVTITK 199 (212)
Q Consensus 160 ~~i~~~~~ai~~~~t~~~l~~-~~~~~P~~~e~~~~~~~~~ 199 (212)
|+|+.+++||++|+|+++|.+ .+++||++++.+..+..+-
T Consensus 397 e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~~~~~~~~ 437 (449)
T 3kd9_A 397 PRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVWDPLIVLA 437 (449)
T ss_dssp HHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSSCHHHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHhhcccccCCCCCCchhHHHHHH
Confidence 999999999999999999999 5889999999999987663
No 25
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.1e-33 Score=249.81 Aligned_cols=176 Identities=27% Similarity=0.444 Sum_probs=156.5
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccc
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNV 83 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~ 83 (212)
++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||.|.. ..+++..+
T Consensus 277 ~~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~ 342 (455)
T 1ebd_A 277 LEQIGIKMT-NRGLIEVDQQCRTSVPNIFAIGDIV------------PGPALAHKASYEGKVAAEAIAGHP-SAVDYVAI 342 (455)
T ss_dssp TTTTTCCBC-TTSCBCCCTTCBCSSTTEEECGGGS------------SSCCCHHHHHHHHHHHHHHHTSCC-CCCCCSCC
T ss_pred hhhcCCccC-CCCCEeeCCCcccCCCCEEEEeccC------------CCcccHHHHHHHHHHHHHHHcCCC-ccCCCCCC
Confidence 688899998 68999999999 9999999999999 456789999999999999999864 34678888
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQ 163 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~ 163 (212)
|+++|++|+++++|+++++|+..+. ++.+...++....+....+ .+.+|+|++++ +++++|||+|++|+++.++|+
T Consensus 343 p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~e~i~ 418 (455)
T 1ebd_A 343 PAVVFSDPECASVGYFEQQAKDEGI--DVIAAKFPFAANGRALALN-DTDGFLKLVVR-KEDGVIIGAQIIGPNASDMIA 418 (455)
T ss_dssp CEEECSSSCEEEEECCHHHHHTTTC--CEEEEEEEGGGCHHHHHHT-CCCCEEEEEEE-TTTTEEEEEEEESTTHHHHHH
T ss_pred CEEEECCCceEEEeCCHHHHHhcCC--CEEEEEEEcCcchHHhhcC-CCcEEEEEEEE-CCCCEEEEEEEeCCCHHHHHH
Confidence 9999999999999999999997753 6777777776666654443 37899999999 889999999999999999999
Q ss_pred HHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 164 GYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 164 ~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
.++++|++++|+++|.+.+++|||++|.+..+++.
T Consensus 419 ~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 453 (455)
T 1ebd_A 419 ELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEV 453 (455)
T ss_dssp HHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999998864
No 26
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2.6e-33 Score=252.20 Aligned_cols=186 Identities=39% Similarity=0.670 Sum_probs=162.6
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcC-CCcc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQ-MDYQ 81 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~-~~~~ 81 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|..... .++.
T Consensus 270 ~~~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~ 336 (463)
T 2r9z_A 270 GLEAAGIEVQ-SNGMVPTDAYQNTNVPGVYALGDIT------------GRDQLTPVAIAAGRRLAERLFDGQSERKLDYD 336 (463)
T ss_dssp CHHHHTCCCC-TTSCCCCCTTSBCSSTTEEECGGGG------------TSCCCHHHHHHHHHHHHHHHHSCCTTCCCCCS
T ss_pred CchhcCCccC-CCCCEeECCCCccCCCCEEEEeecC------------CCcccHHHHHHHHHHHHHHHcCCCCcccCCCC
Confidence 3678899998 78999999999 9999999999999 567899999999999999999865444 6788
Q ss_pred cceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHH
Q psy11186 82 NVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 82 ~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~ 161 (212)
.+|+++|++|+++++|+++.+|++.++ .++.+...++.+..+..... .+.+++|++++ +++++|||+|++|+++.++
T Consensus 337 ~~p~~~~~~~~~a~vGl~e~~a~~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~klv~~-~~~~~ilG~~~~g~~a~~~ 413 (463)
T 2r9z_A 337 NIPTVVFAHPPLSKVGLSEPEARERLG-DVLTVYETSFTPMRYALNEH-GPKTAMKLVCA-GPEQRVVGVHVIGDGADEM 413 (463)
T ss_dssp SCCEEECCSSCEEEEECCHHHHHHHHC-SCEEEEEEEECCGGGTTSSS-CCCEEEEEEEE-TTTTEEEEEEEESTTGGGT
T ss_pred CCCEEEeCCCCeEEEcCCHHHHHhcCC-CCEEEEEEEcccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHH
Confidence 899999999999999999999998754 47888777787777665433 47899999999 8899999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCC
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDP 205 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~ 205 (212)
|+.++++|+.++|+++|.+.+++|||++|.+..++..++...++
T Consensus 414 i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~ 457 (463)
T 2r9z_A 414 LQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLKEPVRRPGDP 457 (463)
T ss_dssp SHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCCSCSBCCC--
T ss_pred HHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHhhcccCCCc
Confidence 99999999999999999999999999999999988776554443
No 27
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=7.4e-33 Score=249.14 Aligned_cols=183 Identities=30% Similarity=0.429 Sum_probs=160.0
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||.|.. ...++.
T Consensus 277 ~l~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~------------~~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~- 341 (464)
T 2eq6_A 277 GLEKAGVKVD-ERGFIRVNARMETSVPGVYAIGDAA------------RPPLLAHKAMREGLIAAENAAGKD-SAFDYQ- 341 (464)
T ss_dssp SHHHHTCCBC-TTSCBCCCTTCBCSSTTEEECGGGT------------CSSCCHHHHHHHHHHHHHHHTTCC-CCCCCC-
T ss_pred ChhhcCceec-CCCCEEECCCcccCCCCEEEEeccC------------CCcccHHHHHHHHHHHHHHhcCCC-cccCCC-
Confidence 3678899997 68999999999 9999999999999 567899999999999999999864 346677
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|++++||+++++|+..+. ++.+...++....+....+ .+.+++|++++ +++++|||+|++|+++.++|
T Consensus 342 ~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~g~~k~~~~-~~~~~ilG~~~~g~~a~e~i 417 (464)
T 2eq6_A 342 VPSVVYTSPEWAGVGLTEEEAKRAGY--KVKVGKFPLAASGRALTLG-GAEGMVKVVGD-EETDLLLGVFIVGPQAGELI 417 (464)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHTS-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHH
T ss_pred CCeEEECCCCEEEEeCCHHHHHhcCC--CEEEEEEEcCcchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 99999999999999999999998764 6777777776666654443 37899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCC
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTP 207 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~ 207 (212)
+.+++||++++|+++|.+.+++|||++|.+..+++. ..+++.+
T Consensus 418 ~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~--~~~~~~~ 460 (464)
T 2eq6_A 418 AEAALALEMGATLTDLALTVHPHPTLSESLMEAAEA--FHKQAIH 460 (464)
T ss_dssp HHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHHH--HTTCCSS
T ss_pred HHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHH--HhcCccc
Confidence 999999999999999999999999999999999976 5455544
No 28
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.4e-32 Score=247.07 Aligned_cols=188 Identities=27% Similarity=0.376 Sum_probs=163.6
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||++.. ...++..
T Consensus 277 ~l~~~gl~~~-~~G~i~vd~~~~t~~~~iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~ 342 (467)
T 1zk7_A 277 ALDAAGVTVN-AQGAIVIDQGMRTSNPNIYAAGDCT------------DQPQFVYVAAAAGTRAAINMTGGD-AALDLTA 342 (467)
T ss_dssp CGGGGTCCBC-TTSCBCCCTTCBCSSTTEEECSTTB------------SSCCCHHHHHHHHHHHHHHHTTCC-CCCCCTT
T ss_pred CchhcCCcCC-CCCCEEECCCcccCCCCEEEEeccC------------CCcccHHHHHHHHHHHHHHHcCCC-cccCCCC
Confidence 4678899998 78999999999 9999999999999 456789999999999999999863 3467778
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|++.|++++++++|+++.+|+..+. ++.+...++....+++... .+.+++|++++ +++++|||++++|+++.++|
T Consensus 343 ~p~~~~~~~~~a~vG~~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~kl~~~-~~~~~ilG~~~~g~~a~~~i 418 (467)
T 1zk7_A 343 MPAVVFTDPQVATVGYSEAEAHHDGI--ETDSRTLTLDNVPRALANF-DTRGFIKLVIE-EGSHRLIGVQAVAPEAGELI 418 (467)
T ss_dssp CEEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHH
T ss_pred CCEEEecCCceEEEecCHHHHHhcCC--CeEEEEEecccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 89999999999999999999988754 6777777776666665543 37899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCCC-CCCCC
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTP-QSCCS 212 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~~-~~~~~ 212 (212)
+.++++|++++|+++|.+.+++|||++|.+..+++. +. ++.+ ++||.
T Consensus 419 ~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~--~~-~~~~~~~~~~ 466 (467)
T 1zk7_A 419 QTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQT--FN-KDVKQLSCCA 466 (467)
T ss_dssp HHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHHT--TT-SCGGGTTTSC
T ss_pred HHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHH--Hh-hhhhhhhhhc
Confidence 999999999999999999999999999999999976 54 4455 67874
No 29
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.6e-32 Score=247.20 Aligned_cols=177 Identities=24% Similarity=0.407 Sum_probs=157.1
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
.|+++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|.. ...+|..
T Consensus 293 ~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~ 358 (478)
T 1v59_A 293 GAEKIGLEVD-KRGRLVIDDQFNSKFPHIKVVGDVT------------FGPMLAHKAEEEGIAAVEMLKTGH-GHVNYNN 358 (478)
T ss_dssp CTTTTTCCBC-TTSCBCCCTTSBCSSTTEEECGGGS------------SSCCCHHHHHHHHHHHHHHHHHSC-CCCCTTS
T ss_pred CchhcCceeC-CCCCEeECcCCccCCCCEEEeeccC------------CCcccHHHHHHHHHHHHHHHcCCC-CCCCCCC
Confidence 5788999998 78999999999 9999999999999 456789999999999999999854 3467888
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|+++++|+|+++|++.+. ++.+...++....+..... .+.+++|++++ +++++|||++++|+++.++|
T Consensus 359 ~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i 434 (478)
T 1v59_A 359 IPSVMYSHPEVAWVGKTEEQLKEAGI--DYKIGKFPFAANSRAKTNQ-DTEGFVKILID-SKTERILGAHIIGPNAGEMI 434 (478)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHH
T ss_pred CCEEEEcCCcEEEEECCHHHHHHcCC--CEEEEEEecccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 99999999999999999999998753 6777777776665554443 36899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
+.++.+|++++|++++.+.+++|||++|.+..+++.
T Consensus 435 ~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 470 (478)
T 1v59_A 435 AEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMA 470 (478)
T ss_dssp HHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999866
No 30
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.9e-32 Score=247.45 Aligned_cols=190 Identities=36% Similarity=0.589 Sum_probs=156.2
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCC-C---------------------CCCCCCCCchhHHHH
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFP-V---------------------LPLFQEKPELTPVAV 60 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~-~---------------------~~~~~~~~~l~~~A~ 60 (212)
+++++|+++. +|+|.||++| |+.|+|||+|||+..+... + .....+.+++++.|.
T Consensus 281 ~~~~~g~~~~--~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 358 (500)
T 1onf_A 281 KLEKLNVETN--NNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAI 358 (500)
T ss_dssp SCTTTTCCBS--SSCEEECTTCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHH
T ss_pred CchhcCcccc--CCEEEECCCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHH
Confidence 3688899984 8999999999 9999999999999411000 0 000013567999999
Q ss_pred HHHHHHHHHHhCCCCcCCCcccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccc----cCCCCCceEE
Q psy11186 61 QAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFI----PQRNPQRCYL 136 (212)
Q Consensus 61 ~~g~~aa~nl~g~~~~~~~~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~ 136 (212)
+||+++|.||+|......+|..+|+++|++|+++++|+++++|++.++..++.+...++.+..+.. ..+ .+.+++
T Consensus 359 ~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 437 (500)
T 1onf_A 359 NAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPEL-KEKTYL 437 (500)
T ss_dssp HHHHHHHHHHHSCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGG-SCCEEE
T ss_pred HHHHHHHHHHhCCCCccCCCCCCCeEEEcCcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccC-CCceEE
Confidence 999999999998655557788899999999999999999999988743246777777777666544 332 378999
Q ss_pred EEEEecCCCCeEEEEEEECccHHHHHHHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHh
Q psy11186 137 KVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTI 197 (212)
Q Consensus 137 klv~d~~~~g~ilGa~~vg~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~ 197 (212)
|++++ +++++|||+|++|+++.++|+.+++||+.++|+++|.+.+++|||++|.+..+..
T Consensus 438 kli~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~ 497 (500)
T 1onf_A 438 KLVCV-GKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQP 497 (500)
T ss_dssp EEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHHCC-
T ss_pred EEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHhcc
Confidence 99999 8899999999999999999999999999999999999999999999999987753
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.7e-32 Score=250.36 Aligned_cols=178 Identities=22% Similarity=0.291 Sum_probs=154.8
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
.|+++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||+|.. ..+++..
T Consensus 321 ~l~~~gl~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~ 386 (523)
T 1mo9_A 321 LAKILGLDLG-PKGEVLVNEYLQTSVPNVYAVGDLI------------GGPMEMFKARKSGCYAARNVMGEK-ISYTPKN 386 (523)
T ss_dssp HHHHHTCCBC-TTSCBCCCTTSBCSSTTEEECGGGG------------CSSCSHHHHHHHHHHHHHHHTTCC-CCCCCCS
T ss_pred CHHHcCCccC-CCCCEEECCCCccCCCCEEEEeecC------------CCcccHHHHHHHHHHHHHHHcCCC-CCCCCCC
Confidence 4778899998 78999999999 9999999999999 567899999999999999999854 3356778
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeecc--------------ccccccCC-CCCceEEEEEEecCCCCe
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKP--------------TEFFIPQR-NPQRCYLKVVCERAAPQK 147 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~--------------~~~~~~~~-~~~~g~~klv~d~~~~g~ 147 (212)
+|+++|++|++++||+|+++|+..+. ++.+...++.. ..+..... ..+.+++|++++ +++++
T Consensus 387 ~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~ 463 (523)
T 1mo9_A 387 YPDFLHTHYEVSFLGMGEEEARAAGH--EIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVID-AKTRK 463 (523)
T ss_dssp CCEEEESSSEEEEEECCHHHHHHTTC--CEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEE-TTTCB
T ss_pred CCeEEECCCceEEEeCCHHHHHhCCC--CEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEE-CCCCE
Confidence 89999999999999999999998864 67777666654 23333220 136899999999 88999
Q ss_pred EEEEEEECccHHHHHHHHHHHHHCCCCHHHHhhc--ccCCCCchhhHHHHHhh
Q psy11186 148 VLGMHFIGPNAGEVIQGYAAAVKCGLTFETLEST--VGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 148 ilGa~~vg~~a~~~i~~~~~ai~~~~t~~~l~~~--~~~~P~~~e~~~~~~~~ 198 (212)
|||+|++|+++.++|+.+++||++++|+++|.+. +++|||++|.+.+++..
T Consensus 464 ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~ 516 (523)
T 1mo9_A 464 VLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFIQLSRLRAG 516 (523)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSCCHHHHHHHHTT
T ss_pred EEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCcceECCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999998 99999999999999877
No 32
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.98 E-value=5.8e-32 Score=243.34 Aligned_cols=184 Identities=18% Similarity=0.168 Sum_probs=138.5
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+. ..+..+|+ +++++.|.+||+++|+||+|.......
T Consensus 262 l~~~~gl~~~-~~g~i~vd~~~~t~~~~Iya~GD~~~-----~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~ 335 (472)
T 3iwa_A 262 LARDAGLELD-PRGAIIVDTRMRTSDPDIFAGGDCVT-----IPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPG 335 (472)
T ss_dssp HHHHHTCCBC-TTCCEECCTTCBCSSTTEEECGGGEE-----EEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCccCC-CCCCEEECCCcccCCCCEEEecccee-----cccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCC
Confidence 3567899998 78999999999 99999999999996 33333344 468899999999999999987654333
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECc---
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP--- 156 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~--- 156 (212)
..+.+++.|++|++++||+||+||++.+. ++++..+. ..++.....+.+.+++|+++| +++++|||+|++|+
T Consensus 336 ~~~~~~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~--~~~~~~~~~~~~~~~~kli~~-~~~~~ilG~~~~g~~~~ 410 (472)
T 3iwa_A 336 AVGSWAVKLFEGSASGAGLTVEGALREGY--DAVNVHVE--QFDRAHFYPEKTIMTLQLVVD-RPTRRVLGIQGFSTLGD 410 (472)
T ss_dssp BCCCEEEECSSCEEEEEECCHHHHHHTTC--CEEEEEEE--C-----------CEEEEEEEE-TTTCBEEEEEEEESCHH
T ss_pred CCcceEEEECCceeEEEECCHHHHHHcCC--ceEEEEEe--cCCccCccCCCceEEEEEEEE-CCCCEEEEEEEECCCcc
Confidence 44455667889999999999999998754 56655433 333332221247899999999 89999999999999
Q ss_pred cHHHHHHHHHHHHHCCCCHHHHhhcccCC-CCchhhHHHHHhh
Q psy11186 157 NAGEVIQGYAAAVKCGLTFETLESTVGIH-PTLAEEFTRVTIT 198 (212)
Q Consensus 157 ~a~~~i~~~~~ai~~~~t~~~l~~~~~~~-P~~~e~~~~~~~~ 198 (212)
.+.|+|+.+++||++|+|+++|.+.+++| ||++|.++.+.++
T Consensus 411 ~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~~~~ 453 (472)
T 3iwa_A 411 ALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDIVNVA 453 (472)
T ss_dssp HHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccHHHHH
Confidence 46899999999999999999999987776 9999999988655
No 33
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=4.6e-31 Score=237.09 Aligned_cols=182 Identities=21% Similarity=0.329 Sum_probs=157.4
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+++++|++++ ++ +|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||.|.. ..+++..
T Consensus 274 ~~~~~g~~~~-~~-~i~vd~~~~t~~~~Iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~ 338 (458)
T 1lvl_A 274 NLECLDLKMN-GA-AIAIDERCQTSMHNVWAIGDVA------------GEPMLAHRAMAQGEMVAEIIAGKA-RRFEPAA 338 (458)
T ss_dssp SGGGSCCCEE-TT-EECCCTTCBCSSTTEEECGGGG------------CSSCCHHHHHHHHHHHHHHHTTCC-CCCCCSC
T ss_pred CcHhcCCccc-CC-EEeECCCCcCCCCCEEEeeccC------------CCcccHHHHHHHHHHHHHHhcCCC-ccCCCCC
Confidence 4688999998 56 79999999 9999999999999 467799999999999999999854 3467788
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|+++|++|+++++|+++++|+..+. ++.+...++....+....+ .+.+++|+++| +++++|+|++++|+++.+++
T Consensus 339 ~p~~~~~~p~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~g~~kl~~d-~~~~~ilG~~~vg~~a~e~i 414 (458)
T 1lvl_A 339 IAAVCFTDPEVVVVGKTPEQASQQGL--DCIVAQFPFAANGRAMSLE-SKSGFVRVVAR-RDNHLILGWQAVGVAVSELS 414 (458)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHHHTT-CCCCEEEEEEE-TTTCBEEEEEEEETTGGGHH
T ss_pred CCEEEECCCCeEEEeCCHHHHHHcCC--CEEEEEEECccchhhhhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 89999999999999999999998764 6777766666555544333 36899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhhhhcCCCCC
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPT 206 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~~~~~~~~~ 206 (212)
+.++++|++|+|++++.+.+++|||++|.+..+++. ..+++.
T Consensus 415 ~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~--~~~~~~ 456 (458)
T 1lvl_A 415 TAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAALR--ALGHAL 456 (458)
T ss_dssp HHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHHH--HTTCCS
T ss_pred HHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHH--Hhcccc
Confidence 999999999999999999999999999999999876 444443
No 34
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=1.2e-30 Score=235.72 Aligned_cols=185 Identities=17% Similarity=0.259 Sum_probs=153.1
Q ss_pred ccccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCC
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQM 78 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~ 78 (212)
..++++|++++ ++|+|.||++| |+.|+|||+|||+. ..+..+|+ +++++.|.+||+++|.||.|......
T Consensus 285 ~~l~~~g~~~~-~~G~I~Vd~~~~ts~p~IyA~GD~~~-----~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~ 358 (480)
T 3cgb_A 285 DFLEGTNIRTN-HKGAIEVNAYMQTNVQDVYAAGDCAT-----HYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFK 358 (480)
T ss_dssp GGGTTSCCCBC-TTSCBCCCTTSBCSSTTEEECGGGBC-----EEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHhCCcccC-CCCCEEECCCccCCCCCEEEeeeEEE-----ecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCC
Confidence 35788899998 78999999999 99999999999996 22222343 36899999999999999998654434
Q ss_pred CcccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc-
Q psy11186 79 DYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN- 157 (212)
Q Consensus 79 ~~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~- 157 (212)
++..+|++.|++++++++|+++.+|++.+. ++.+..+.......+++. .+.+++|++++ +++++|||++++|+.
T Consensus 359 ~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~~~~~~~~~~~~~~--~~~~~~kl~~~-~~~~~ilG~~~vg~~~ 433 (480)
T 3cgb_A 359 GTLGTGIIKFMNLTLARTGLNEKEAKGLHI--PYKTVKVDSTNMAGYYPN--AKPLYLKLLYR-SDTKQLLGGQVIGEEG 433 (480)
T ss_dssp CBCCCEEEEETTEEEEEEECCHHHHHHTTC--CEEEEEEEEESSCTTSTT--CCEEEEEEEEE-TTTCBEEEEEEEESSS
T ss_pred CccceeEEEECCcEEEEeCCCHHHHHHcCC--ceEEEEEecCCcccccCC--CceEEEEEEEE-CCCCEEEEEEEECCcc
Confidence 566789999999999999999999988754 565554444333334432 36899999999 889999999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHhh-cccCCCCchhhHHHHHhh
Q psy11186 158 AGEVIQGYAAAVKCGLTFETLES-TVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~~l~~-~~~~~P~~~e~~~~~~~~ 198 (212)
+.++|+.++.+|++++|+++|.+ .+++|||++|.+..+..+
T Consensus 434 a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 475 (480)
T 3cgb_A 434 VDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVWDPIQQA 475 (480)
T ss_dssp HHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCchhHHHHH
Confidence 99999999999999999999999 478999999999988765
No 35
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=1.8e-30 Score=232.70 Aligned_cols=177 Identities=25% Similarity=0.392 Sum_probs=155.7
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
+++++|++++ ++|+|.||++| |+.|+|||+|||+ +.+.+++.|.+||+++|.||.|.. ..+++..
T Consensus 270 ~~~~~g~~~~-~~g~i~vd~~~~t~~~~iya~GD~~------------~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~ 335 (455)
T 2yqu_A 270 SLENAGLSTD-ERGRIPVDEHLRTRVPHIYAIGDVV------------RGPMLAHKASEEGIAAVEHMVRGF-GHVDYQA 335 (455)
T ss_dssp CGGGGTCCCC-TTSCCCCCTTSBCSSTTEEECGGGS------------SSCCCHHHHHHHHHHHHHHHHHSC-CCCCGGG
T ss_pred ChhhcCCccC-CCCcEeECCCcccCCCCEEEEecCC------------CCccCHHHHHHhHHHHHHHHcCCC-ccCCCCC
Confidence 3788899988 68999999999 9999999999999 467899999999999999999864 3467778
Q ss_pred ceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHH
Q psy11186 83 VATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVI 162 (212)
Q Consensus 83 ~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i 162 (212)
+|++.|++|+++++|+++++|++.+. ++.+...++....+..... .+.+++|++++ +++++|||++++|+.+.+++
T Consensus 336 ~p~~~~~~~~~a~~G~~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i 411 (455)
T 2yqu_A 336 IPSVVYTHPEIAAVGYTEEELKAQGI--PYKVGKFPYSASGRARAMG-ETEGFIKVLAH-AKTDRILGVHGIGARVGDVL 411 (455)
T ss_dssp CCEEECSSSEEEEEECCHHHHHHHTC--CEEEEEEEGGGCHHHHHHT-CCCCEEEEEEE-TTTCBEEEEEEEETTHHHHH
T ss_pred CCEEEEcCCceEEEECCHHHHHHcCC--CEEEEEEEcccchHHHhcC-CCcEEEEEEEE-CCCCEEEEEEEECCCHHHHH
Confidence 89999999999999999999998864 6777766666555544333 36899999999 88999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHhhcccCCCCchhhHHHHHhh
Q psy11186 163 QGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~~~~~ 198 (212)
+.++++|++|++++++.+.+++|||++|.+..+++.
T Consensus 412 ~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~~ 447 (455)
T 2yqu_A 412 AEAALALFFKASAEDLGRAPHAHPSLSEILKEAALA 447 (455)
T ss_dssp HHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999866
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.97 E-value=2.7e-30 Score=236.75 Aligned_cols=183 Identities=19% Similarity=0.271 Sum_probs=146.2
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+. ..+..+|. +++++.|.+||+++|+||+|.......
T Consensus 271 l~~~~g~~~~-~~g~i~vd~~~~t~~~~IyA~GD~~~-----~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~ 344 (565)
T 3ntd_A 271 LARDAGLAIG-ELGGIKVNAMMQTSDPAIYAVGDAVE-----EQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQG 344 (565)
T ss_dssp HHHHHTCCBC-TTSSBCCCTTCBCSSTTEEECGGGBC-----EEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCcccC-CCCCEEECCCcccCCCCEEEeeeeEe-----eccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCC
Confidence 3567899998 78999999999 99999999999996 33333344 368999999999999999987654333
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccH-
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNA- 158 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a- 158 (212)
....+++.|++|+++++|+|+++|++.+. ++++..+.......+++. .+.+++|+++| +++++|||+|++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~~~--~~~~~~k~v~~-~~~~~ilG~~~~g~~a~ 419 (565)
T 3ntd_A 345 TQGTAICKVFDLAVGATGKNEKQLKQAGI--AFEKVYVHTASHASYYPG--AEVVSFKLLFD-PVKGTIFGAQAVGKDGI 419 (565)
T ss_dssp BCCCEEEEETTEEEEEEECCHHHHHHTTC--CCEEEEEEEESSCTTSTT--CCEEEEEEEEC-TTTCBEEEEEEEESSSH
T ss_pred cccceEEEEcCcEEEEecCCHHHHHHcCC--CeEEEEEecCcccCcCCC--CceEEEEEEEE-CCCCEEEEEEEECCccH
Confidence 44455677889999999999999998764 454443332222233332 47899999999 8999999999999998
Q ss_pred HHHHHHHHHHHHCCCCHHHHhhc-ccCCCCchhhHHHHHh
Q psy11186 159 GEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTI 197 (212)
Q Consensus 159 ~~~i~~~~~ai~~~~t~~~l~~~-~~~~P~~~e~~~~~~~ 197 (212)
.|+|+.+++||++|+|+++|.+. +.+||++++.+..+..
T Consensus 420 ~e~i~~~~~ai~~~~~~~~l~~~~~~~~P~~~~~~~~i~~ 459 (565)
T 3ntd_A 420 DKRIDVMAVAQRAGMTVEQLQHLELSYAPPYGSAKDVINQ 459 (565)
T ss_dssp HHHHHHHHHHHHTTCBHHHHTTCCCCCCTTTCCSSCHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhhhhccCcccCchhhhhhh
Confidence 89999999999999999999995 4677999877776643
No 37
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.97 E-value=8.3e-31 Score=234.78 Aligned_cols=176 Identities=21% Similarity=0.230 Sum_probs=143.2
Q ss_pred CCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcC-CCcccc
Q psy11186 9 GVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQ-MDYQNV 83 (212)
Q Consensus 9 gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~-~~~~~~ 83 (212)
+++++ ++|+|.||++| |+.|+|||+|||+. ..+..+++ +++++.|.+||+++|.||+|..... ..+..+
T Consensus 252 ~~~~~-~~g~i~vd~~~~t~~~~IyA~GD~~~-----~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~ 325 (452)
T 3oc4_A 252 KIQRN-LDQTIAVDAYLQTSVPNVFAIGDCIS-----VMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTM 325 (452)
T ss_dssp TSCBC-TTSCBCCCTTCBCSSTTEEECGGGBC-----EEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCE
T ss_pred hhccC-CCCCEEECcCccCCCCCEEEEEeeEE-----eccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccE
Confidence 48888 78999999999 99999999999995 22222222 3589999999999999999875432 245566
Q ss_pred eeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECc-cHHHHH
Q psy11186 84 ATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP-NAGEVI 162 (212)
Q Consensus 84 ~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~-~a~~~i 162 (212)
|+.+| ++++++||+||+||++.+. ++++..+++.. +.+. . .+.+++|++++ +++++|||+|++|+ ++.|+|
T Consensus 326 ~~~~~-~~~~a~vG~te~~a~~~g~--~~~~~~~~~~~--~~~~-~-~~~~~~kli~~-~~~~~ilG~~~~g~~~a~e~i 397 (452)
T 3oc4_A 326 GTKVG-DYYLASTGLTETEGLFFPQ--TLASIIVRQPA--PPLQ-H-GTEILGKLIYD-KVTQRVLGAQLCSKNNCLEKI 397 (452)
T ss_dssp EEEET-TEEEEEEECCSGGGGGSSS--CEEEEEEEEEC--TTTT-C-SCEEEEEEEEE-TTTCBEEEEEEEESSCCTHHH
T ss_pred EEEEc-CeeEEEecCCHHHHHHCCC--ceEEEEEecCC--ccCC-C-CCeEEEEEEEE-CCCCEEEEEEEEeCCCHHHHH
Confidence 77777 5799999999999987653 56666554433 2333 2 47899999999 88999999999999 799999
Q ss_pred HHHHHHHHCCCCHHHHhhc-ccCCCCchhhHHHHHhh
Q psy11186 163 QGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 163 ~~~~~ai~~~~t~~~l~~~-~~~~P~~~e~~~~~~~~ 198 (212)
+.+++||++|+|+++|.+. +++||+++|.+..+..+
T Consensus 398 ~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~~~a 434 (452)
T 3oc4_A 398 NTLALSIQTGQTLTDLLQKDYFYQPSLTNIYDITNLM 434 (452)
T ss_dssp HHHHHHHHTTCBHHHHHTCCCCCCTTTSCSSCHHHHH
T ss_pred HHHHHHHHcCCCHHHHHhhHhccCCCCCCchhHHHHH
Confidence 9999999999999999996 89999999988887655
No 38
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=6e-30 Score=229.06 Aligned_cols=183 Identities=15% Similarity=0.162 Sum_probs=146.9
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++ ++++ ++|+|.||++| |+.|+|||+|||+. ..+..+++ +++++.|.+||+++|.||+|......+
T Consensus 251 ll~~~-l~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~~-----~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~ 323 (452)
T 2cdu_A 251 LLKGK-VAML-DNGAIITDEYMHSSNRDIFAAGDSAA-----VHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMG 323 (452)
T ss_dssp GGTTT-SCBC-TTSCBCCCTTSBCSSTTEEECSTTBC-----EEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCC
T ss_pred HHHHh-hhcC-CCCCEEECCCcCcCCCCEEEcceEEE-----eccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCC
Confidence 46666 8887 68999999999 99999999999996 22222232 478999999999999999986544345
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECc-cH
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP-NA 158 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~-~a 158 (212)
+...+++.+++|+++++|+++.+|+..+. ++.+.. +....+.......+.+++|++++ +++++|||+|++|+ ++
T Consensus 324 ~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~-~~~~~ilG~~~~g~~~~ 398 (452)
T 2cdu_A 324 TQSSSGLKLYGRTYVSTGINTALAKANNL--KVSEVI--IADNYRPEFMLSTDEVLMSLVYD-PKTRVILGGALSSMHDV 398 (452)
T ss_dssp BCCCEEEEETTEEEEEEECCHHHHHHTTC--CCEEEE--EEEESSCTTBSCCCEEEEEEEEC-TTTCBEEEEEEEESSCC
T ss_pred ccceEEEEECCeeeEeecCCHHHHHHcCC--ceEEEE--EecCCccccCCCCceEEEEEEEE-CCCCEEEEEEEEcCccH
Confidence 55677888889999999999999998753 454432 33333332221136799999999 88999999999999 79
Q ss_pred HHHHHHHHHHHHCCCCHHHHhh-cccCCCCchhhHHHHHhh
Q psy11186 159 GEVIQGYAAAVKCGLTFETLES-TVGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 159 ~~~i~~~~~ai~~~~t~~~l~~-~~~~~P~~~e~~~~~~~~ 198 (212)
.++|+.++++|++++|++++.+ .+++|||++|.+..+..+
T Consensus 399 ~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 439 (452)
T 2cdu_A 399 SQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNYLNIL 439 (452)
T ss_dssp HHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHHHHHH
Confidence 9999999999999999999998 499999999999888655
No 39
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.97 E-value=6.2e-30 Score=235.95 Aligned_cols=182 Identities=20% Similarity=0.264 Sum_probs=143.7
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhC-CCCcCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYG-NGTTQM 78 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g-~~~~~~ 78 (212)
.++++|++++ ++|+|.||++| |+.|+|||+|||+. ..+..+|. +++++.|.+||+++|.||+| ......
T Consensus 286 ~l~~~g~~~~-~~g~i~vd~~~~t~~~~IyA~GD~~~-----~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~ 359 (588)
T 3ics_A 286 LAKGAGLALG-VRGTIKVNEKFQTSDPHIYAIGDAIE-----VKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYK 359 (588)
T ss_dssp HHHHTTCCBC-GGGCBCCCTTSBCSSTTEEECGGGBC-----EEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCC
T ss_pred HHHhcCceEc-CCCCEEECCccccCCCCEEEeeeeee-----cccccCCcccccccHHHHHHHHHHHHHHhcCCCccccC
Confidence 4678899998 78999999999 99999999999996 33333343 46899999999999999998 543322
Q ss_pred CcccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc-
Q psy11186 79 DYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN- 157 (212)
Q Consensus 79 ~~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~- 157 (212)
...+.+...|++|++++||+||+||++.+. ++.+..+.......+.. + .+.|++|+++| +++++|||+|++|++
T Consensus 360 ~~~~~~~~~~~~~~~a~vGlte~~a~~~g~--~~~~~~~~~~~~~~~~~-~-~~~~~~k~i~~-~~~~~ilG~~~~g~~~ 434 (588)
T 3ics_A 360 GTLGTSVAKVFDLTVATTGLNEKILKRLNI--PYEVVHVQANSHAGYYP-N-ATPVLIKLIFN-KDSGKIYGAQTLGRDG 434 (588)
T ss_dssp CBCCCEEEEETTEEEEEEECCHHHHHHTTC--CCEEEEEEEESSCTTST-T-CCEEEEEEEEC-TTTCBEEEEEEEESSS
T ss_pred CcccceEEEECCeEEEEecCCHHHHHHcCC--CeEEEEEecCCccccCC-C-CceEEEEEEEE-CCCCeEEEEEEEcCCc
Confidence 333344556889999999999999998864 45555433222222222 2 47899999999 899999999999985
Q ss_pred HHHHHHHHHHHHHCCCCHHHHhhcccCC-CCchhhHHHHH
Q psy11186 158 AGEVIQGYAAAVKCGLTFETLESTVGIH-PTLAEEFTRVT 196 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~~l~~~~~~~-P~~~e~~~~~~ 196 (212)
+.|+|+.+++||++|+|+++|.+.++.| |++++.+..+.
T Consensus 435 ~~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~d~i~ 474 (588)
T 3ics_A 435 VDKRMDVIATAIKANLTVLDLPDLELSYAPPYSSAKDPVN 474 (588)
T ss_dssp HHHHHHHHHHHHHTTCBTTTGGGCCCCCSTTTCCSSCHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhhhhccCCCcccccchhh
Confidence 8999999999999999999999976665 99887766553
No 40
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=1.1e-29 Score=227.03 Aligned_cols=183 Identities=17% Similarity=0.233 Sum_probs=147.1
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++ ++++ ++|+|.||++| |+.|+|||+|||+. ..+...++ +++++.|.+||+++|.||.|......+
T Consensus 250 ~~~~~-~~~~-~~G~i~Vd~~~~t~~~~Iya~GD~~~-----~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~ 322 (447)
T 1nhp_A 250 WLKGT-LELH-PNGLIKTDEYMRTSEPDVFAVGDATL-----IKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPG 322 (447)
T ss_dssp GGTTT-SCBC-TTSCBCCCTTCBCSSTTEEECGGGSC-----EEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCC
T ss_pred HHHhh-hhhc-CCCcEEECccccCCCCCEEEeeeEEE-----eeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCC
Confidence 45666 8887 68999999999 99999999999995 22222222 468999999999999999986533345
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc-H
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN-A 158 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~-a 158 (212)
+...+++.|++++++++|+++.+|+..+. ++.+.. +....+.......+.+++|++++ +++++|||+|++|++ +
T Consensus 323 ~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~-~~~~~ilG~~~~g~~~a 397 (447)
T 1nhp_A 323 VQGSSGLAVFDYKFASTGINEVMAQKLGK--ETKAVT--VVEDYLMDFNPDKQKAWFKLVYD-PETTQILGAQLMSKADL 397 (447)
T ss_dssp BCCCEEEEETTEEEEEEECCHHHHHHHTC--CCEEEE--EEEESSCTTCTTCCEEEEEEEEC-TTTCBEEEEEEEESSCC
T ss_pred ccccEEEEECCeeeEEecCCHHHHHHcCC--ceEEEE--EEcCCccccCCCCceEEEEEEEE-CCCCEEEEEEEEcCccH
Confidence 56788999999999999999999998754 444432 22223322221236899999999 889999999999999 9
Q ss_pred HHHHHHHHHHHHCCCCHHHHhhc-ccCCCCchhhHHHHHhh
Q psy11186 159 GEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 159 ~~~i~~~~~ai~~~~t~~~l~~~-~~~~P~~~e~~~~~~~~ 198 (212)
.++|+.++++|++++|++++.+. +++|||++|.+..+..+
T Consensus 398 ~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 438 (447)
T 1nhp_A 398 TANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIINTA 438 (447)
T ss_dssp TTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHHHH
Confidence 99999999999999999999995 89999999999888665
No 41
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.96 E-value=3.1e-29 Score=226.96 Aligned_cols=183 Identities=20% Similarity=0.269 Sum_probs=146.4
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++ ++++ ++|+|.||++| |+.|+|||+|||+. ..+..+++ +++++.|.+||+++|.||+|.......
T Consensus 295 ll~~~-l~~~-~~G~I~Vd~~~~t~~~~IyA~GD~~~-----~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~ 367 (490)
T 2bc0_A 295 LGNGK-IDLF-RNGAFLVNKRQETSIPGVYAIGDCAT-----IYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIG 367 (490)
T ss_dssp GGTTC-SCBC-TTSCBCCCTTCBCSSTTEEECGGGBC-----EEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhh-hccC-CCCCEEECCCcccCCCCEEEeeeeEE-----eccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 35666 8887 68999999999 99999999999996 22222232 468999999999999999986543344
Q ss_pred cccceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCC-CCCceEEEEEEecCCCCeEEEEEEECc-c
Q psy11186 80 YQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQR-NPQRCYLKVVCERAAPQKVLGMHFIGP-N 157 (212)
Q Consensus 80 ~~~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~klv~d~~~~g~ilGa~~vg~-~ 157 (212)
+...+++.+++++++++|+++.+|+..+. ++.+. .+....+..... ..+.+++|++++ +++++|||++++|+ +
T Consensus 368 ~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~--~~~~~~~~~~~~~~~~~~~~kl~~~-~~~~~ilG~~~~g~~~ 442 (490)
T 2bc0_A 368 VQGSNGISIYGLHMVSTGLTLEKAKRLGF--DAAVT--EYTDNQKPEFIEHGNFPVTIKIVYD-KDSRRILGAQMAARED 442 (490)
T ss_dssp BCCCEEEEETTEEEEEEECCHHHHHHTTC--CEEEE--EEEEESSCTTCCSSCCEEEEEEEEE-TTTCBEEEEEEEESSC
T ss_pred cccceEEEECCcEeEEeeCCHHHHHHcCC--ceEEE--EEecCCcccccCCCCceEEEEEEEE-CCCCEEEEEEEEcCcC
Confidence 55667777779999999999999988653 45544 333333332221 136799999999 88999999999999 7
Q ss_pred HHHHHHHHHHHHHCCCCHHHHhhc-ccCCCCchhhHHHHHhh
Q psy11186 158 AGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 198 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~~l~~~-~~~~P~~~e~~~~~~~~ 198 (212)
+.++|+.++.+|++++|++++.+. +++|||++|.+..+..+
T Consensus 443 a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~~ 484 (490)
T 2bc0_A 443 VSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITMA 484 (490)
T ss_dssp CTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchhHHHHHH
Confidence 999999999999999999999994 99999999999998776
No 42
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.80 E-value=3.5e-19 Score=156.81 Aligned_cols=150 Identities=15% Similarity=0.242 Sum_probs=113.5
Q ss_pred ccccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcc
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQ 81 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~ 81 (212)
..++++|++.+ +| |.||++| |+.|+|||+|||+.+++ ..+.+++.|.+||+++|.||+|.........
T Consensus 234 ~~~~~~gl~~~--~g-i~vd~~~~t~~~~IyA~GD~a~~~~--------~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~ 302 (385)
T 3klj_A 234 DFIKDTEIASK--RG-ILVNDHMETSIKDIYACGDVAEFYG--------KNPGLINIANKQGEVAGLNACGEDASYSEII 302 (385)
T ss_dssp GGGTTSCCCBS--SS-EEECTTCBCSSTTEEECGGGEEETT--------BCCCCHHHHHHHHHHHHHHHTTCCCCCCCCC
T ss_pred hhhhhcCCCcC--CC-EEECCCcccCCCCEEEEEeeEecCC--------CcccHHHHHHHHHHHHHHHhcCCCcCCCCCC
Confidence 35788899986 67 9999999 99999999999996321 1356899999999999999998754311112
Q ss_pred cceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHH
Q psy11186 82 NVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 82 ~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~ 161 (212)
+..++.+++++++++|+++.+. +... .. .. ....|+|++++ +++|+|++++|+....+
T Consensus 303 ~~~~~~~~~~~~~~~G~~~~~~------~~~~-~~-----------~~-~~~~~~~~~~~---~~~l~g~~~~g~~~~~~ 360 (385)
T 3klj_A 303 PSPILKVSGISIISCGDIENNK------PSKV-FR-----------ST-QEDKYIVCMLK---ENKIDAAAVIGDVSLGT 360 (385)
T ss_dssp CCCEEEETTEEEEEESCCTTCC------CSEE-EE-----------EE-CSSCEEEEEEE---TTEEEEEEEESCHHHHH
T ss_pred CcEEEEeCCCcEEEEcCCCCCC------CeEE-EE-----------EC-CCCeEEEEEEE---CCEEEEEEEECCcHHHH
Confidence 2335555789999999997531 1221 11 11 25679999998 79999999999965443
Q ss_pred HHHHHHHHHCCCCHHHHhhcccCCCCchhhHHH
Q psy11186 162 IQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 194 (212)
Q Consensus 162 i~~~~~ai~~~~t~~~l~~~~~~~P~~~e~~~~ 194 (212)
.+..+|+++.+++++ |+++|.+..
T Consensus 361 --~~~~~i~~~~~~~~~-------~~~~E~~~~ 384 (385)
T 3klj_A 361 --KLKKAIDSSKSFDNI-------SSLDAILNN 384 (385)
T ss_dssp --HHHHHHHTTCBCSCC-------SCHHHHHTT
T ss_pred --HHHHHHHcCCCcccc-------cCHHHHHhh
Confidence 688999999999888 999998753
No 43
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.72 E-value=1.9e-17 Score=144.83 Aligned_cols=129 Identities=19% Similarity=0.202 Sum_probs=99.2
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCccc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQN 82 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~ 82 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.+.+ ....+++.|.+||+++|+||+|.. ..+++..
T Consensus 247 l~~~~g~~~~--~g-i~vd~~~~t~~~~IyA~GD~~~~~~--------~~~~~~~~a~~~g~~~a~~i~g~~-~~~~~~~ 314 (384)
T 2v3a_A 247 LAFAAGLAVN--RG-IVVDRSLRTSHANIYALGDCAEVDG--------LNLLYVMPLMACARALAQTLAGNP-SQVAYGP 314 (384)
T ss_dssp HHHHTTCCBS--SS-EEECTTCBCSSTTEEECGGGEEETT--------BCCCSHHHHHHHHHHHHHHHTTCC-CCCCCCC
T ss_pred HHHHCCCCCC--CC-EEECCCCCCCCCCEEEeeeeeeECC--------CCcchHHHHHHHHHHHHHHhcCCC-ccCCCCC
Confidence 4678899986 68 9999999 99999999999995211 112467889999999999999865 4577888
Q ss_pred ceeEEEcC-CceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccHHHH
Q psy11186 83 VATTVFTP-LEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEV 161 (212)
Q Consensus 83 ~~~~~~~~-~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~ 161 (212)
+|+++|+. +++..+|++..+. ..... .. .+.+++|++++ ++++|+|++++|+++.|+
T Consensus 315 ~p~~~~~~~~~~~~~g~~~~~~------~~~~~-------------~~-~~~g~~~~~~~--~~~~i~G~~~~g~~a~e~ 372 (384)
T 2v3a_A 315 MPVTVKTPACPLVVSPPPRGMD------GQWLV-------------EG-SGTDLKVLCRD--TAGRVIGYALTGAAVNEK 372 (384)
T ss_dssp CCEEECCTTSCEEEECCCTTCC------CEEEE-------------EE-ETTEEEEEEEC--TTSCEEEEEEEGGGGGGH
T ss_pred cceEEEECCeeEEEecCCCCCC------ceEEE-------------Ee-cCCcEEEEEEc--cCCEEEEEEEECcchHHH
Confidence 99988886 6999999875310 01111 11 24678888887 479999999999999998
Q ss_pred HHHHH
Q psy11186 162 IQGYA 166 (212)
Q Consensus 162 i~~~~ 166 (212)
++.+.
T Consensus 373 ~~~~~ 377 (384)
T 2v3a_A 373 LALNK 377 (384)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87753
No 44
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.69 E-value=2.6e-17 Score=143.74 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=83.7
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHhCCCCcCCCcc
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK-PELTPVAVQAGKLLAARLYGNGTTQMDYQ 81 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~-~~l~~~A~~~g~~aa~nl~g~~~~~~~~~ 81 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.+. +. +.+++.|.+||+++|.||.|... .+++.
T Consensus 238 ll~~~gl~~~--~g-i~Vd~~~~t~~~~IyA~GD~a~~~---------~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~~ 304 (367)
T 1xhc_A 238 LARRSGIHTG--RG-ILIDDNFRTSAKDVYAIGDCAEYS---------GIIAGTAKAAMEQARVLADILKGEPR-RYNFK 304 (367)
T ss_dssp HHHHTTCCBS--SS-EECCTTSBCSSTTEEECGGGEEBT---------TBCCCSHHHHHHHHHHHHHHHTTCCC-CCCSS
T ss_pred HHHhCCCCCC--CC-EEECCCcccCCCCEEEeEeeeecC---------CCCccHHHHHHHHHHHHHHHhcCCCc-cCCCC
Confidence 4678899885 67 9999999 9999999999999521 22 46899999999999999998643 23332
Q ss_pred -cceeEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECccH
Q psy11186 82 -NVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNA 158 (212)
Q Consensus 82 -~~~~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a 158 (212)
+.+++.|++++++++|+++.++ .+ + .+|+|++++ +++|+|++++|+.+
T Consensus 305 ~~~~~~~~~~~~~~~vG~~~~~~--------~~-----~-------------~~~~k~~~~---~~~ilG~~~~g~~~ 353 (367)
T 1xhc_A 305 FRSTVFKFGKLQIAIIGNTKGEG--------KW-----I-------------EDNTKVFYE---NGKIIGAVVFNDIR 353 (367)
T ss_dssp CCEEEEEETTEEEEEEECCSSCE--------EE-----E-------------ETTEEEEC--------CEEEEESCHH
T ss_pred CCceEEEECCceEEEECCCCCCC--------cc-----c-------------ceEEEEEEE---CCEEEEEEEECChH
Confidence 2224589999999999998631 11 0 568999998 58999999999964
No 45
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.64 E-value=5.5e-15 Score=130.54 Aligned_cols=140 Identities=16% Similarity=0.140 Sum_probs=99.5
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.. .+..+|. ..+++.|.+||+++|.||.|... .+
T Consensus 243 l~~~~gl~~~--~g-i~Vd~~~~t~~~~IyA~GD~~~~-----~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~ 312 (408)
T 2gqw_A 243 LARAAGLACD--DG-IFVDAYGRTTCPDVYALGDVTRQ-----RNPLSGRFERIETWSNAQNQGIAVARHLVDPTA--PG 312 (408)
T ss_dssp HHHHHTCCBS--SS-EECCTTCBCSSTTEEECGGGEEE-----EETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS--CC
T ss_pred HHHhCCCCCC--CC-EEECCCCccCCCCEEEEEEEEEe-----cCccCCceeeccHHHHHHHHHHHHHHHhcCCCC--Cc
Confidence 4678899986 67 9999999 999999999999962 2222232 24788999999999999998653 14
Q ss_pred cccceeE--EEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc
Q psy11186 80 YQNVATT--VFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN 157 (212)
Q Consensus 80 ~~~~~~~--~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~ 157 (212)
|..+|++ .+++++++++|+ +. . ..+.+ .-. +.. ...+|++++++ +++|+|++++|+.
T Consensus 313 ~~~~p~~~~~~~~~~~~~~G~-~~-----~--~~~~~---~~~------~~~-~~~~~~~~~~~---~~~l~G~~~~g~~ 371 (408)
T 2gqw_A 313 YAELPWYWSDQGALRIQVAGL-AS-----G--DEEIV---RGE------VSL-DAPKFTLIELQ---KGRIVGATCVNNA 371 (408)
T ss_dssp CCCCCEEEEEETTEEEEEEEC-SC-----C--SEEEE---ESC------CCS-SSCCEEEEEEE---TTEEEEEEEESCH
T ss_pred CCCCCeEEEEECCceEEEECC-CC-----C--CEEEE---Ecc------CCC-CCCeEEEEEEe---CCEEEEEEEECCh
Confidence 5666654 344689999999 21 0 12211 000 110 14567777776 7999999999996
Q ss_pred HHHHHHHHHHHHHCCCCHH
Q psy11186 158 AGEVIQGYAAAVKCGLTFE 176 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~ 176 (212)
+ .+..+..+|+.+.+++
T Consensus 372 ~--~~~~~~~~i~~~~~~~ 388 (408)
T 2gqw_A 372 R--DFAPLRRLLAVGAKPD 388 (408)
T ss_dssp H--HHHHHHHHHHTTCCCC
T ss_pred H--HHHHHHHHHHCCCCCC
Confidence 4 4688999999998553
No 46
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.64 E-value=1.6e-15 Score=134.92 Aligned_cols=151 Identities=20% Similarity=0.150 Sum_probs=107.6
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.+ .+...|. ..+++.|.+||+++|.||+|... .
T Consensus 254 l~~~~gl~~~--~g-i~Vd~~~~ts~~~IyA~GD~~~~-----~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~ 322 (431)
T 1q1r_A 254 LASAAGLQVD--NG-IVINEHMQTSDPLIMAVGDCARF-----HSQLYDRWVRIESVPNALEQARKIAAILCGKVP---R 322 (431)
T ss_dssp HHHHTTCCBS--SS-EECCTTSBCSSTTEEECGGGEEE-----EETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC---C
T ss_pred hhhccCCCCC--CC-EEECCCcccCCCCEEEEEeEEEE-----ccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC---C
Confidence 4678899986 67 9999999 999999999999962 1111222 24678999999999999998653 4
Q ss_pred cccceeE--EEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc
Q psy11186 80 YQNVATT--VFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN 157 (212)
Q Consensus 80 ~~~~~~~--~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~ 157 (212)
|..+|++ .+.+++++++|+++.. +.+.+. - .. ....+++++.+ +++|+|++++|+.
T Consensus 323 ~~~~p~~~~~~~~~~~~~~G~~~~~-------~~~~~~---~--------~~-~~~~~~~~~~~---~~~l~G~~~~g~~ 380 (431)
T 1q1r_A 323 DEAAPWFWSDQYEIGLKMVGLSEGY-------DRIIVR---G--------SL-AQPDFSVFYLQ---GDRVLAVDTVNRP 380 (431)
T ss_dssp CCCCCEEEEEETTEEEEEEECCTTC-------SEEEEE---E--------ET-TTTEEEEEEEE---TTEEEEEEEESCH
T ss_pred CCCCCeEEEEECCceEEEEeCCCCC-------CEEEEE---c--------cC-CCCeEEEEEEe---CCEEEEEEEECCh
Confidence 5566654 3345899999998631 122111 0 11 24567766554 7999999999998
Q ss_pred HHHHHHHHHHHHHCCCCHHHHhhcccCCCC
Q psy11186 158 AGEVIQGYAAAVKCGLTFETLESTVGIHPT 187 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~~l~~~~~~~P~ 187 (212)
+.+++.....+++.+++.++|.+..+....
T Consensus 381 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~ 410 (431)
T 1q1r_A 381 VEFNQSKQIITDRLPVEPNLLGDESVPLKE 410 (431)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHTCTTSCHHH
T ss_pred HHHHHHHHHHHCCCCCCHHHhhCCCCCHHH
Confidence 878877777777777888888876554443
No 47
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.55 E-value=3.3e-14 Score=125.56 Aligned_cols=141 Identities=16% Similarity=0.076 Sum_probs=100.1
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.++ +.. |. ..+++.|..||+++|.||+|.. ..
T Consensus 245 l~~~~gl~~~--~g-i~vd~~~~t~~~~IyA~GD~a~~~-----~~~-g~~~~~~~~~~A~~qg~~aa~~i~g~~---~~ 312 (410)
T 3ef6_A 245 LARQAGLACD--RG-VIVDHCGATLAKGVFAVGDVASWP-----LRA-GGRRSLETYMNAQRQAAAVAAAILGKN---VS 312 (410)
T ss_dssp HHHHTTCCBS--SS-EECCTTSBCSSTTEEECGGGEEEE-----BTT-SSEECCCCHHHHHHHHHHHHHHHTTCC---CC
T ss_pred HHHhCCCccC--Ce-EEEccCeeECCCCEEEEEcceecc-----CCC-CCeeeechHHHHHHHHHHHHHHHcCCC---CC
Confidence 4678899986 66 9999999 9999999999999622 211 22 3568999999999999999875 34
Q ss_pred cccce--eEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc
Q psy11186 80 YQNVA--TTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN 157 (212)
Q Consensus 80 ~~~~~--~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~ 157 (212)
|..+| |+.+++..+.++|+++.. +++. . . .......|.+++++ +++|+|+.++|.
T Consensus 313 ~~~~p~~~~~~~~~~~~~~G~~~~~-------~~~~-~--~---------~~~~~~~~~~~~~~---~~~l~g~~~~~~- 369 (410)
T 3ef6_A 313 APQLPVSWTEIAGHRMQMAGDIEGP-------GDFV-S--R---------GMPGSGAALLFRLQ---ERRIQAVVAVDA- 369 (410)
T ss_dssp CCBCCEEEEEETTEEEEEESCSSSS-------SEEE-E--E---------SCTTSSSEEEEEEE---TTEEEEEEEESC-
T ss_pred CCCCCeeEEEECCceEEEEcCCCCC-------CEEE-E--E---------eeCCCCeEEEEEEE---CCEEEEEEEECC-
Confidence 55555 445567899999987531 1111 1 0 11124557887776 789999999999
Q ss_pred HHHHHHHHHHHHHCCCC--HHHHhh
Q psy11186 158 AGEVIQGYAAAVKCGLT--FETLES 180 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t--~~~l~~ 180 (212)
......+..+|..+.. .++|.+
T Consensus 370 -~~~~~~~~~~i~~~~~~~~~~l~~ 393 (410)
T 3ef6_A 370 -PRDFALATRLVEARAAIEPARLAD 393 (410)
T ss_dssp -HHHHHHHHHHHHHTCBCCHHHHHC
T ss_pred -hHHHHHHHHHHhCCCCCCHHHhcC
Confidence 4455667778877754 455554
No 48
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.54 E-value=6.3e-14 Score=123.31 Aligned_cols=137 Identities=18% Similarity=0.182 Sum_probs=100.2
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK---PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~---~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.+ .+...|. ..+++.|..||+++|.||+|... .
T Consensus 245 l~~~~gl~~~--~G-i~vd~~~~t~~~~iya~GD~a~~-----~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~ 313 (404)
T 3fg2_P 245 IAAAAGLPTA--AG-IIVDQQLLTSDPHISAIGDCALF-----ESVRFGETMRVESVQNATDQARCVAARLTGDAK---P 313 (404)
T ss_dssp HHHHTTCCBS--SS-EEECTTSBCSSTTEEECGGGEEE-----EETTTTEEECCCSHHHHHHHHHHHHHHTTTCCC---C
T ss_pred HHHhCCCCCC--CC-EEECCCcccCCCCEEEeecceee-----cCccCCceeeehHHHHHHHHHHHHHHHhCCCCC---C
Confidence 4678899986 67 9999999 999999999999962 2222232 34689999999999999998753 3
Q ss_pred cccce--eEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECcc
Q psy11186 80 YQNVA--TTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN 157 (212)
Q Consensus 80 ~~~~~--~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~ 157 (212)
|..+| |+.+++..+..+|++.. . +.+. .. . .. ....|.+++++ +++|+|+.++|.
T Consensus 314 ~~~~p~~~~~~~~~~~~~~G~~~~------~-~~~~-~~--~--------~~-~~~~~~~~~~~---~~~~~g~~~~~~- 370 (404)
T 3fg2_P 314 YDGYPWFWSDQGDDKLQIVGLTAG------F-DQVV-IR--G--------SV-AERSFSAFCYK---AGKLIGIESVNR- 370 (404)
T ss_dssp CCCCCEEEEEETTEEEEEEECCTT------C-CEEE-EE--E--------ET-TTTEEEEEEEE---TTEEEEEEEESC-
T ss_pred CCCCCceEeEECCcEEEEEeCCCC------C-CEEE-EE--e--------cC-CCCcEEEEEEE---CCEEEEEEEeCC-
Confidence 55555 55666789999999742 1 1221 11 0 11 25678888887 689999999999
Q ss_pred HHHHHHHHHHHHHCCCCH
Q psy11186 158 AGEVIQGYAAAVKCGLTF 175 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~ 175 (212)
......+..+|..+..+
T Consensus 371 -~~~~~~~~~~~~~~~~~ 387 (404)
T 3fg2_P 371 -AADHVFGRKILPLDKSV 387 (404)
T ss_dssp -HHHHHHHHHHTTTTCCC
T ss_pred -HHHHHHHHHHHHcCCCC
Confidence 45566778888887665
No 49
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.54 E-value=7.9e-14 Score=123.00 Aligned_cols=142 Identities=22% Similarity=0.207 Sum_probs=101.3
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCC-CC---CchhHHHHHHHHHHHHHHhCCCCcCC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQ-EK---PELTPVAVQAGKLLAARLYGNGTTQM 78 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~-~~---~~l~~~A~~~g~~aa~nl~g~~~~~~ 78 (212)
.++++|++++ +| |.||++| |+.|+|||+|||+.+ .+... |. ..+++.|.+||+++|+||+|...
T Consensus 255 l~~~~gl~~~--~g-i~vd~~~~t~~~~iyA~GD~a~~-----~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--- 323 (415)
T 3lxd_A 255 ALISAGASGG--NG-VDVDEFCRTSLTDVYAIGDCAAH-----ANDFADGAVIRLESVQNANDMATAAAKDICGAPV--- 323 (415)
T ss_dssp HHHHTTCCCS--SS-EECCTTCBCSSTTEEECGGGEEE-----ECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCC---
T ss_pred HHHhCCCCcC--CC-EEECCCCCcCCCCEEEEEeeeee-----cCcccCCcceeechHHHHHHHHHHHHHHhcCCCC---
Confidence 4677899886 67 9999999 999999999999962 22111 22 34689999999999999998753
Q ss_pred Ccccce--eEEEcCCceeeecCCHHHHHHhhCCCCEEEEEEeeccccccccCCCCCceEEEEEEecCCCCeEEEEEEECc
Q psy11186 79 DYQNVA--TTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP 156 (212)
Q Consensus 79 ~~~~~~--~~~~~~~~ia~vGlt~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~klv~d~~~~g~ilGa~~vg~ 156 (212)
.|..+| |+.+++..+..+|++... +.+.+. - .. ....|.+++++ +++|+|+..+|.
T Consensus 324 ~~~~~p~~~~~~~~~~~~~~G~~~~~-------~~~~~~---~--------~~-~~~~~~~~~~~---~~~~~g~~~~~~ 381 (415)
T 3lxd_A 324 PYKATPWFWSNQYDLKLQTVGLSTGH-------DNAVLR---G--------DP-ATRSFSVVYLK---GGKVVALDCVNM 381 (415)
T ss_dssp CCCCCCEEEEEETTEEEEEEECCTTC-------SEEEEE---E--------EG-GGTEEEEEEEE---TTEEEEEEEESC
T ss_pred CCCCCCeeEeeeCCcEEEEEeCCCCC-------CEEEEE---e--------cC-CCCeEEEEEEE---CCEEEEEEEECC
Confidence 355555 456667899999998431 122111 0 01 24678888887 689999999999
Q ss_pred cHHHHHHHHHHHHHCCCCH--HHHhh
Q psy11186 157 NAGEVIQGYAAAVKCGLTF--ETLES 180 (212)
Q Consensus 157 ~a~~~i~~~~~ai~~~~t~--~~l~~ 180 (212)
......+..+|..+..+ ++|.+
T Consensus 382 --~~~~~~~~~~~~~~~~~~~~~l~~ 405 (415)
T 3lxd_A 382 --VKDYVQGKKLVEARAQIAPEQLAD 405 (415)
T ss_dssp --HHHHHHHHHHHHHTCCCCHHHHTC
T ss_pred --hHHHHHHHHHHHCCCCCCHHHhcC
Confidence 44556677888877554 44443
No 50
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.21 E-value=1.2e-11 Score=111.77 Aligned_cols=161 Identities=16% Similarity=0.152 Sum_probs=90.1
Q ss_pred cccccCCeeccC-CCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHhCCCCcCCC
Q psy11186 4 AVSNAGVKVIPE-NAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEK--PELTPVAVQAGKLLAARLYGNGTTQMD 79 (212)
Q Consensus 4 ~l~~~gl~~~~~-~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~--~~l~~~A~~~g~~aa~nl~g~~~~~~~ 79 (212)
.++++|++++ + +|+|.||++| | .|+|||+|||+.+ .+...|. ...++.|..||++||.||+|... .
T Consensus 286 l~~~~gl~~~-~~~ggi~Vd~~l~t-~~~IyA~GD~a~~-----~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~---~ 355 (493)
T 1m6i_A 286 LAKTGGLEID-SDFGGFRVNAELQA-RSNIWVAGDAACF-----YDIKLGRRRVEHHDHAVVSGRLAGENMTGAAK---P 355 (493)
T ss_dssp THHHHTCCBC-TTTCSEECCTTCEE-ETTEEECGGGEEE-----EETTTEEECCCCHHHHHHHHHHHHHHHTSCCC---C
T ss_pred HHHHcCCccc-cCCCcEEECCCccc-CCCeeEeeeeEec-----cCcccCccccchHHHHHHHHHHHHHHhcCCCC---C
Confidence 4677899987 4 5789999999 9 5999999999962 2222222 23577999999999999998643 2
Q ss_pred ccccee--EEEc-----------CCceeeecCCHHH--------HHHhhCC------------CCEEEEEEeeccccccc
Q psy11186 80 YQNVAT--TVFT-----------PLEYGCVGLSEEK--------AEELYGA------------DNLEIYHAYYKPTEFFI 126 (212)
Q Consensus 80 ~~~~~~--~~~~-----------~~~ia~vGlt~~~--------a~~~~~~------------~~~~~~~~~~~~~~~~~ 126 (212)
|...|+ +-.. +..+.++|+.... .....+. ..+++....-...+ ..
T Consensus 356 ~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 434 (493)
T 1m6i_A 356 YWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQ-AP 434 (493)
T ss_dssp CCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHHHHHHSCSCHHHHSCSCCCC----------------
T ss_pred cCCcCceeeeeccCcceEEEeccCCCcceEEeecccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence 444443 2111 2244444431100 0000000 00000000000000 00
Q ss_pred cCCCCCceEEEEEEecCCCCeEEEEEEECccHHHHHHHHHHHHHCCCCHHHHhh
Q psy11186 127 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLES 180 (212)
Q Consensus 127 ~~~~~~~g~~klv~d~~~~g~ilGa~~vg~~a~~~i~~~~~ai~~~~t~~~l~~ 180 (212)
........++.++++ +++|+|+.++|.- ..+..+..+|+.+.+++++.+
T Consensus 435 ~~~~~~~~~~~~~~~---~~~~~g~~~~~~~--~~~~~~~~li~~~~~~~~~~~ 483 (493)
T 1m6i_A 435 VQGEDYGKGVIFYLR---DKVVVGIVLWNIF--NRMPIARKIIKDGEQHEDLNE 483 (493)
T ss_dssp -----CCEEEEEEEE---TTEEEEEEEESCC--SCHHHHHHHHHHCCBCSCSTT
T ss_pred cccccCCcEEEEEEe---CCEEEEEEEecCc--chHHHHHHHHhCCCCCCCHHH
Confidence 000012345667776 7899999999984 345667888888887766654
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.09 E-value=1.2e-10 Score=98.25 Aligned_cols=55 Identities=22% Similarity=0.348 Sum_probs=47.6
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+++.|+.. ++|+|+||++| ||.|+|||+|||+. ..+.+++.|..||++||.|+.
T Consensus 247 ~~~~~g~~~--~~G~I~vd~~~~Ts~pgIyA~GDv~~-----------~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 247 PFKDLGITN--DVGYIVTKDDMTTSVPGIFAAGDVRD-----------KGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp GGGGGTCBC--TTSCBCCCTTSBCSSTTEEECSTTBS-----------CSCCSHHHHHHHHHHHHHHHH
T ss_pred hHHhcceec--CCCeEeeCCCCccCCCCEEEEeecCC-----------CcchHHHHHHHHHHHHHHHHH
Confidence 466778875 48999999999 99999999999994 345789999999999999985
No 52
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.03 E-value=1e-10 Score=98.52 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=47.9
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.++++|++++ ++|+|.||++| ||.|+|||+|||+. ..+..+..|..+|++||..+.
T Consensus 240 ~~~~~g~~~~-~~G~I~vd~~~~Ts~p~IyA~GDv~~-----------~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 240 FIEQLGCELQ-SNGTFVIDDFGRTSEKNIYLAGETTT-----------QGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp HHHHTTCCCC-TTSSSCSSTTCBCSSTTEEECSHHHH-----------TSCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhcCeEEC-CCCCEEECcCCccCCCCEEEEeccCC-----------CcchHHHHHHHHHHHHHHHHH
Confidence 4778899999 79999999999 99999999999994 234457789999999998763
No 53
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.98 E-value=6.4e-10 Score=97.07 Aligned_cols=71 Identities=18% Similarity=0.213 Sum_probs=54.0
Q ss_pred ccccccCCeeccCCCceecCCC-C--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh----CCCC
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNE-Q--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY----GNGT 75 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~-l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~----g~~~ 75 (212)
+.++++|+. + ++|+|.||++ | |++|||||+|||+... ..|.+++.|.+||+++|+||. |+..
T Consensus 260 ~~~~~~gl~-~-~~G~i~VD~~tl~~t~~p~VfAiGDva~~~---------~~pk~a~~A~~qa~v~A~ni~~~l~G~~~ 328 (401)
T 3vrd_B 260 KIAQSASLT-N-DSGWCPVDIRTFESSLQPGIHVIGDACNAA---------PMPKSAYSANSQAKVAAAAVVALLKGEEP 328 (401)
T ss_dssp HHHHHTTCC-C-TTSSBCBCTTTCBBSSSTTEEECGGGBCCT---------TSCBSHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhHhhcccc-c-cCCCEEECCCcceecCCCCEEEecccccCC---------CCCchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 457888995 4 5899999997 5 8999999999999511 235789999999999999986 5544
Q ss_pred cCCCcccce
Q psy11186 76 TQMDYQNVA 84 (212)
Q Consensus 76 ~~~~~~~~~ 84 (212)
....|.+..
T Consensus 329 ~~~~y~~~~ 337 (401)
T 3vrd_B 329 GTPSYLNTC 337 (401)
T ss_dssp CCCCEEEEE
T ss_pred CCcccCCeE
Confidence 334444433
No 54
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.89 E-value=1.9e-09 Score=90.88 Aligned_cols=58 Identities=34% Similarity=0.437 Sum_probs=50.1
Q ss_pred ccccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
..++++|++++ ++|+|.||++| |+.|+|||+|||+. ..+.+++.|..||+++|.|+..
T Consensus 255 ~~l~~~gl~~~-~~g~i~vd~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 255 SFLKDSGVKLD-ERGYIVVDSRQRTSVPGVYAAGDVTS-----------GNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp GGGTTSCCCBC-TTSCBCCCTTCBCSSTTEEECSTTBT-----------TCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccc-CCccEeCCCCCccCCCCEEEeecccC-----------cchhhHHHHHHHHHHHHHHHHH
Confidence 35677899988 78999999999 99999999999994 2346889999999999999863
No 55
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.89 E-value=1.1e-09 Score=85.31 Aligned_cols=54 Identities=28% Similarity=0.318 Sum_probs=47.1
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhC
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPE-LTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~-l~~~A~~~g~~aa~nl~g 72 (212)
++.+|++++ +|.|.||++| |+.|+|||+|||+. .+. +++.|.+||+++|.||.+
T Consensus 113 ~~~~g~~~~--~g~i~vd~~~~t~~~~i~a~GD~~~------------~~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 113 PSLLGLTRR--GAYIDTDEGGRTSYPRVYAAGVARG------------KVPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp HHHHTCCEE--TTEECCCTTCBCSSTTEEECGGGGT------------CCSCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcc--CceEEeCCCCCcCCCCEEEeecccC------------cchhhHHHHHHhHHHHHHHHHH
Confidence 366789887 7999999999 99999999999994 333 889999999999999975
No 56
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.85 E-value=3.3e-09 Score=93.96 Aligned_cols=67 Identities=22% Similarity=0.254 Sum_probs=48.8
Q ss_pred cccccC--CeeccCCCceecCCCC--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 4 AVSNAG--VKVIPENAKIDSDNEQ--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 4 ~l~~~g--l~~~~~~G~I~Vd~~l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+.++| +..+ .+|+|.||++| |+.|||||+|||+..++........+.|...+.|.+||+++|+||.
T Consensus 259 ~~~~~~~~l~~~-~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 259 VVASAGDKVANP-ANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp HHHTTCTTTBCT-TTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccccC-CceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 345555 4444 46779999999 8999999999999754321111122346788999999999999997
No 57
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.84 E-value=3.8e-09 Score=88.55 Aligned_cols=56 Identities=25% Similarity=0.276 Sum_probs=48.2
Q ss_pred cccccC----CeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 4 AVSNAG----VKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 4 ~l~~~g----l~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.++++| ++++ ++|+|.||++| |+.|+|||+|||+. ..+.+++.|..||+++|.|+.
T Consensus 245 ~l~~~g~~~~l~~~-~~g~i~vd~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 245 VLKQEDNSMLCKCD-EYGSIVVDFSMKTNVQGLFAAGDIRI-----------FAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp GGBCTTSCBSSCBC-TTSCBCCCTTCBCSSTTEEECSTTBT-----------TCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhcccccceeEec-cCCCEEeCCccccCCCCeEEcccccC-----------cchHHHHHHHHhHHHHHHHHH
Confidence 355554 8888 68999999999 99999999999994 236789999999999999986
No 58
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.79 E-value=6.9e-09 Score=86.94 Aligned_cols=51 Identities=25% Similarity=0.245 Sum_probs=41.9
Q ss_pred cCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 8 AGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+++++ ++| ++||++| ||.|+|||+|||+. +...+++.|..+|++||.++.
T Consensus 257 ~~~~~~-~~G-~iv~~~~~Ts~pgIyA~GDv~~-----------~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 257 GQVKTA-DDG-YILTEGPKTSVDGVFACGDVCD-----------RVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp TSSCBC-TTS-CBCCBTTBCSSTTEEECSTTTC-----------SSCCCHHHHHHHHHHHHHHHH
T ss_pred ccceEc-CCe-eEeCCCCccCCCCEEEEEeccC-----------CcchHHHHHHHHHHHHHHHHH
Confidence 457777 677 6699999 99999999999994 223478889999999998874
No 59
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.78 E-value=2.5e-09 Score=104.53 Aligned_cols=52 Identities=25% Similarity=0.215 Sum_probs=47.0
Q ss_pred cCCeeccCCCceecCC-CC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 8 AGVKVIPENAKIDSDN-EQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~-~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
+|++++ ++|+|.||+ +| |+.|+|||+|||+ +.+.+++.|+.||+.||.+|.+
T Consensus 452 ~gl~~~-~~G~I~vd~~~~~Ts~~~VfA~GD~~------------~~~~~~~~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 452 SPIKFN-RWDLPEVDPETMQTSEPWVFAGGDIV------------GMANTTVESVNDGKQASWYIHK 505 (1025)
T ss_dssp TTSCBC-TTSSBCCCTTTCBCSSTTEEECSGGG------------CSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCceEC-CCCCEEECCCCCccCCCCEEEeCCCC------------CCchHHHHHHHHHHHHHHHHHH
Confidence 589998 789999997 78 9999999999999 4567899999999999999974
No 60
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.78 E-value=6e-09 Score=86.97 Aligned_cols=52 Identities=21% Similarity=0.316 Sum_probs=46.3
Q ss_pred cC-CeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 8 AG-VKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 8 ~g-l~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
+| ++++ ++|+|.||++| |+.|+|||+|||+. ..+..++.|..||++||.|+.
T Consensus 255 ~g~l~~~-~~g~i~vd~~~~t~~~~v~a~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 255 KFLCNME-EGGQVSVDLKMQTSVAGLFAAGDLRK-----------DAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CBSSCBC-TTSCBCCCTTCBCSSTTEEECGGGBT-----------TCCCCHHHHHHHHHHHHHHHH
T ss_pred cceeeec-CCCcEEeCCCcccCCCCEEEeecccC-----------CchhhhhhHHhhHHHHHHHHH
Confidence 55 9988 78999999999 99999999999994 346788999999999999986
No 61
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.78 E-value=7.4e-09 Score=87.05 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=50.6
Q ss_pred ccccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
..++++|++++ +|+|.||+++ |+.|+|||+|||+.++ +.+.+++.|..||+++|.|+..
T Consensus 253 ~~~~~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~---------~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 253 GPIKNWGLDIE--KNSIVVKSTMETNIEGFFAAGDICTYE---------GKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp GGGGGSSCCEE--TTEEECCTTSBCSSTTEEECGGGEECT---------TCCCCHHHHHHHHHHHHHHHHH
T ss_pred hHHhhcCcccc--CCeEEeCCCCceecCCEEEccceecCC---------CCcceEeeehhhHHHHHHHHHH
Confidence 35788899985 7999999999 9999999999999521 3567899999999999999863
No 62
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.76 E-value=1.1e-08 Score=92.74 Aligned_cols=55 Identities=20% Similarity=0.197 Sum_probs=46.0
Q ss_pred ccCCeeccCCCceecCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 7 NAGVKVIPENAKIDSDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 7 ~~gl~~~~~~G~I~Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
+.+++.+ .+|+|.||++| | ++|||||+|||+.. +.|++++.|.+||+++|+||.+
T Consensus 342 ~~~~~~~-~~g~I~Vd~~lq~~~~~~IfAiGD~a~~----------~~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 342 KIPEQNS-SKRGLAVNDFLQVKGSNNIFAIGDNAFA----------GLPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp HSGGGTT-CCSSEEBCTTSBBTTCSSEEECGGGEES----------SSCCCHHHHHHHHHHHHHHHHH
T ss_pred hcccccc-CCCceeECCccccCCCCCEEEEEcccCC----------CCCCchHHHHHHHHHHHHHHHH
Confidence 4466666 67899999999 5 89999999999951 3467899999999999999853
No 63
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.75 E-value=9.8e-09 Score=86.73 Aligned_cols=56 Identities=30% Similarity=0.327 Sum_probs=47.6
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.++++ ++++ ++|+|.||++| |+.|+|||+|||+. ..+.+++.|..||+++|.|+..
T Consensus 253 ~l~~~-~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 253 FVKDT-VSLR-DDGYVDVRDEIYTNIPMLFAAGDVSD-----------YIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp GGTTT-SCBC-TTSCBCCBTTTBCSSTTEEECSTTTC-----------SSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhh-cccC-CCccEecCCCCccCCCCEEEeecccC-----------ccHHHHHHHHHHHHHHHHHHHH
Confidence 35555 7777 68999999999 99999999999994 2357899999999999999864
No 64
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.74 E-value=8.8e-09 Score=86.13 Aligned_cols=58 Identities=28% Similarity=0.307 Sum_probs=49.8
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.++.+|++++ ++|+|.||+++ |+.|+|||+|||+..+ ..+..++.|..||+++|.|+.
T Consensus 255 ~~~~~g~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~---------~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 255 FAKSNGIETD-TNGYIKVDEWMRTSVPGVFAAGDCTSAW---------LGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp HHHHTTCCBC-TTSSBCCCTTCBCSSTTEEECSTTBSTT---------TTCCCHHHHHHHHHHHHHHHH
T ss_pred HHhhcCeeec-CCCcEecCCCceecCCCEEEcceecCCC---------CcccceeehhhHHHHHHHHHH
Confidence 4678899998 78999999999 9999999999999410 136789999999999999986
No 65
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.74 E-value=7e-09 Score=88.97 Aligned_cols=58 Identities=10% Similarity=0.270 Sum_probs=49.8
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.++++|++++ +|+|.||++| |+.|+|||+|||+..+ +.+.+++.|..||+++|.|+.+
T Consensus 267 ~l~~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~---------~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 267 PLARWDLELY--ENALVVDSHMKTSVDGLYAAGDIAYYP---------GKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp GGGGSSCCEE--TTEEECCTTSBCSSTTEEECSTTEECT---------TCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccccc--cCeeeecCCCcCCCCCEEEecCccCCC---------CccceeehhHHHHHHHHHHHHh
Confidence 5778899887 6889999999 9999999999999521 2467899999999999999974
No 66
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.73 E-value=1.5e-08 Score=85.80 Aligned_cols=58 Identities=26% Similarity=0.424 Sum_probs=49.7
Q ss_pred cccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.++++|++++ +|+|.||++| |+.|+|||+|||+..+ +.+.+++.|..||+++|.|+.+
T Consensus 256 ~l~~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~---------~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 256 PLANWGLALE--KNKIKVDTTMATSIPGVYACGDIVTYP---------GKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp GGGGSCCCEE--TTEEECCTTCBCSSTTEEECSTTEECT---------TCCCCHHHHHHHHHHHHHHHHH
T ss_pred Hhhhcceecc--CCeeeeCCCCCCCCCCEEEeccccccC---------cchhhhhhhHHHHHHHHHHHHH
Confidence 5778899987 6889999999 9999999999999521 2457899999999999999874
No 67
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.69 E-value=1.2e-08 Score=91.47 Aligned_cols=56 Identities=27% Similarity=0.386 Sum_probs=50.0
Q ss_pred cccccCCeeccCCCceecCCC-C-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 4 AVSNAGVKVIPENAKIDSDNE-Q-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 4 ~l~~~gl~~~~~~G~I~Vd~~-l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.++++|++++ ++|+|.||++ + |+.|+|||+|||+. .+.++..|+.+|+.||.+|.+
T Consensus 384 ~l~~~gl~~~-~~G~i~vd~~~~~Ts~~~VfA~GD~~~------------g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 384 AFDEPELKVT-RWGTLLVDHRTKMTNMDGVFAAGDIVR------------GASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp HHHSTTSCBC-TTSSBCCCTTTCBCSSTTEEECGGGGS------------SCCSHHHHHHHHHHHHHHHHH
T ss_pred hcccCCeeEC-CCCCEEECCCCCcCCCCCEEEeccccC------------CchHHHHHHHHHHHHHHHHHH
Confidence 4678899998 7899999998 8 99999999999993 567899999999999999863
No 68
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.69 E-value=2.3e-08 Score=83.69 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=45.9
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
|++ +++++ ++|+|.||++| |+.|+|||+|||+. ..+..++.|..+|+.+|.|+..
T Consensus 247 l~~-~l~~~-~~g~i~vd~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 247 LEG-AVERN-RMGEIIIDAKCETNVKGVFAAGDCTT-----------VPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp GTT-TSCBC-TTSCBCCCTTCBCSSTTEEECSTTBS-----------CSSCCHHHHHHHHHHHHHHHHH
T ss_pred Hhc-ccccc-CCCcEEcCCCCccCCCCEEEeecccC-----------CcchhhhhhHhhHHHHHHHHHH
Confidence 444 37887 68999999999 99999999999994 2235778999999999999863
No 69
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.63 E-value=1.1e-07 Score=84.32 Aligned_cols=62 Identities=16% Similarity=0.221 Sum_probs=46.7
Q ss_pred cCCeeccCCCceecCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 8 AGVKVIPENAKIDSDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
+|+ .+ ++|+|.||++| | +.|+|||+|||+..++........+.|...+.|..||+++|+||.
T Consensus 277 ~gl-~~-~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 277 EGL-CN-PGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp TTT-BC-TTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccc-cC-CCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 677 45 68999999999 6 999999999999633210000111246788999999999999997
No 70
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.62 E-value=2.4e-08 Score=82.61 Aligned_cols=56 Identities=25% Similarity=0.286 Sum_probs=47.7
Q ss_pred cccccCCeecc-CCC-ceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 4 AVSNAGVKVIP-ENA-KIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 4 ~l~~~gl~~~~-~~G-~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.++++|++++. ++| +|.||+++ |+.|+|||+|||+ +.+..++.|..||+++|.|+.
T Consensus 230 ~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~------------~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 230 WIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVA------------RPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp CHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGG------------CTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecC------------CchHHHHHHHHhHHHHHHHHH
Confidence 46778888761 136 89999999 9999999999999 347789999999999999985
No 71
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.59 E-value=6.7e-08 Score=85.34 Aligned_cols=63 Identities=17% Similarity=0.180 Sum_probs=46.8
Q ss_pred cCCeeccCCC-ceecCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 8 AGVKVIPENA-KIDSDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 8 ~gl~~~~~~G-~I~Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
+|+ .+ ++| +|.||++| | +.|+|||+|||+..++........+.|.+.+.|..||+++|+||..
T Consensus 265 ~gl-~~-~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 265 DKV-AN-PANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TTT-BC-TTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccC-cC-CCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 578 55 689 99999999 7 9999999999996322100001112467889999999999999863
No 72
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.57 E-value=6.7e-08 Score=81.35 Aligned_cols=51 Identities=25% Similarity=0.298 Sum_probs=44.6
Q ss_pred CCeeccCCCceec-CCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 9 GVKVIPENAKIDS-DNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 9 gl~~~~~~G~I~V-d~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|++++ ++|+|.| |+++ |+.|+|||+|||+. ..+..+..|..+|+.||.||.
T Consensus 279 ~l~~~-~~G~i~v~~~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 279 QVDTD-EAGYIKTVPGSSLTSVPGFFAAGDVQD-----------SKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp TBCBC-TTSCBCCCTTSSBCSSTTEEECGGGGC-----------SSCCCHHHHHHHHHHHHHHHH
T ss_pred ceEec-CCCcEEEcCcccccCCCCEEEeeccCC-----------CCccceeeehhhhHHHHHHHH
Confidence 89988 7999985 7888 99999999999995 345678899999999999986
No 73
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.55 E-value=8.6e-08 Score=81.41 Aligned_cols=52 Identities=21% Similarity=0.273 Sum_probs=44.7
Q ss_pred cCCeeccCCCceecCCC-C-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 8 AGVKVIPENAKIDSDNE-Q-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~~-l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+++++ ++|+|.||++ + |+.|+|||+|||+. ..+..+..|..+|+.+|.|+.
T Consensus 259 ~~l~~~-~~G~i~vd~~~~~t~~~~iya~GD~~~-----------~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 259 EAIDVD-PDGYVLVQGRTTSTSLPGVFAAGDLVD-----------RTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp TTBCBC-TTSCBCCSTTSSBCSSTTEEECGGGTC-----------CSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccC-CCccEEeCCCCCccCCCCEEEeeecCC-----------ccHHHHHHHHHhHHHHHHHHH
Confidence 588888 7899999997 5 99999999999994 234578899999999999985
No 74
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.55 E-value=9.4e-08 Score=80.71 Aligned_cols=52 Identities=27% Similarity=0.351 Sum_probs=44.6
Q ss_pred cCCeeccCCCceecCCC-C-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 8 AGVKVIPENAKIDSDNE-Q-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~~-l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+++++ ++|+|.||++ + |+.|+|||+|||+. ..+..+..|..+|+.||.|+.
T Consensus 266 ~~l~~~-~~G~i~vd~~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~ 319 (333)
T 1vdc_A 266 GGVELD-SDGYVVTKPGTTQTSVPGVFAAGDVQD-----------KKYRQAITAAGTGCMAALDAE 319 (333)
T ss_dssp TSSCBC-TTSCBCCCTTSCBCSSTTEEECGGGGC-----------SSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccc-CCCCEEechhhcccCCCCEEEeeeccC-----------CCchhHHHHHHhHHHHHHHHH
Confidence 578887 6899999998 5 99999999999994 224578899999999999986
No 75
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.45 E-value=1.5e-07 Score=79.52 Aligned_cols=57 Identities=9% Similarity=0.151 Sum_probs=46.4
Q ss_pred ccccccCCeeccCCCceecCCC--C-CCCCCeEEcC--ccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 3 PAVSNAGVKVIPENAKIDSDNE--Q-TNIPNVFAVG--DVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 3 ~~l~~~gl~~~~~~G~I~Vd~~--l-Ts~p~IyA~G--D~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
+.++++|++ + ++|+|.||++ + |+.|+|||+| ||+. ..+.....|.+||+++|.||..
T Consensus 288 ~~l~~~gl~-~-~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~-----------~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 288 SHLKGLDLV-T-PQGQVEVDGSGLRALAVPSVWLLGYGDWNG-----------MASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp GGGTTTTCB-C-TTSCBCBCTTSCBBSSCTTEEECSSCGGGS-----------TTCSSTTTHHHHHHHHHHHHHH
T ss_pred cccCccccc-C-CCCCccccCCcccCCCCCCeEEeccccccc-----------cchhhhhhhHHHHHHHHHHHHH
Confidence 457888998 6 6899999999 7 9999999999 5553 1345667799999999999864
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.44 E-value=2.3e-07 Score=84.27 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=45.8
Q ss_pred ccccCCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 5 VSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|++ +++++ ++|+|.||++| |+.|+|||+|||+. ..+..+..|..+|+.||.++.
T Consensus 458 l~~-~l~~~-~~G~I~Vd~~~~ts~p~VfA~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 458 LEG-ALERN-RMGEIIIDAKCETSVKGVFAAGDCTT-----------VPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp GTT-TSCBC-TTSCBCCCTTCBCSSTTEEECSTTBC-----------CSSCCHHHHHHHHHHHHHHHH
T ss_pred Hhh-hhccC-CCCcEEeCCCCCCCCCCEEEeecccC-----------CCcceeeehHHhHHHHHHHHH
Confidence 444 48887 68999999999 99999999999994 233578899999999999986
No 77
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.37 E-value=2.4e-07 Score=81.05 Aligned_cols=57 Identities=32% Similarity=0.446 Sum_probs=46.6
Q ss_pred ccccc--CCeeccCCCceecCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 4 AVSNA--GVKVIPENAKIDSDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 4 ~l~~~--gl~~~~~~G~I~Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.++++ ++ .+ ++|+|.||++| | +.|+|||+|||+.. +.+.+++.|..||+++|+||.+
T Consensus 273 ~l~~~~~~l-~~-~~G~i~vd~~~~~~~~~~vfa~GD~~~~----------~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 273 ALKNSTPDL-VD-DGGFIPTDLNMVSIKYDNVYAVGDANSM----------TVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp HHHTSCGGG-SC-TTSCBCBBTTSBBSSCTTEEECGGGBTT----------CCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccC-cC-CCCCEEeCcccccCCCCCEEEeehhccC----------CCCcHHHHHHHHHHHHHHHHHH
Confidence 45666 45 34 58999999999 7 99999999999951 2467889999999999999974
No 78
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.33 E-value=6.9e-07 Score=74.80 Aligned_cols=51 Identities=25% Similarity=0.326 Sum_probs=43.5
Q ss_pred cCCeeccCCCceecCCC-----C-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 8 AGVKVIPENAKIDSDNE-----Q-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~~-----l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+++++ +|+|.||++ + |+.|+|||+|||+. ..+..+..|..+|+.||.|+.
T Consensus 254 ~~l~~~--~G~i~vd~~~~~~~~~t~~~~vya~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 254 GQLELE--NGYIKVQSGIHGNATQTSIPGVFAAGDVMD-----------HIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp TTSCEE--TTEECCCCSSSSCTTBCSSTTEEECGGGGC-----------SSSCCHHHHHHHHHHHHHHHH
T ss_pred cccccc--CceEEECCCcccccccCCCCCEEEcccccC-----------CcchhhhhhhccHHHHHHHHH
Confidence 578886 799999998 4 99999999999994 234578899999999999985
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.10 E-value=1.3e-06 Score=78.31 Aligned_cols=53 Identities=11% Similarity=0.093 Sum_probs=44.5
Q ss_pred cCC-eeccCCCceecCCCC-CC-CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 8 AGV-KVIPENAKIDSDNEQ-TN-IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 8 ~gl-~~~~~~G~I~Vd~~l-Ts-~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.|+ +++ ++|+|.||+++ |+ .|+|||+|||+. +...++..|..+|+.+|.||.+
T Consensus 337 ~gl~~~d-~~g~i~vn~~~rt~~~p~vya~Gd~~~-----------g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 337 DPSVPFD-PKLGVVPNMEGRVVDVPGLYCSGWVKR-----------GPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp CTTSCCB-TTTTBCCEETTEETTCTTEEECTHHHH-----------CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccc-cCCCeeECCCCcCcCCCCEEEEEeCCc-----------CCCccHHHHHHHHHHHHHHHHH
Confidence 577 888 67889999999 88 799999999994 3234577899999999999875
No 80
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.05 E-value=1.8e-06 Score=73.65 Aligned_cols=60 Identities=18% Similarity=0.127 Sum_probs=44.0
Q ss_pred ccccCCeeccCCCceecCCC-C-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCC
Q psy11186 5 VSNAGVKVIPENAKIDSDNE-Q-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNG 74 (212)
Q Consensus 5 l~~~gl~~~~~~G~I~Vd~~-l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~ 74 (212)
+.+.+++ + ++|+|.||++ + |+.|+|||+|||+... +. ....++.+.+||+++|+||.|..
T Consensus 277 ~~~~~~~-~-~~g~i~v~~~~~~t~~~~v~a~GD~~~~~-----~~---~~~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 277 IVQQLFV-T-TNQDIKLTTHDESTRYPNIFMIGATVEND-----NA---KLCYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp HHHHHSC-C-TTSCCCBCTTSBBSSSTTEEECSTTCCCS-----SC---CCCSHHHHGGGHHHHHHHHHHHT
T ss_pred hhhhhcc-C-CCCCEEechhhcccCCCCeEEeccccccC-----Ce---eEEEEehhhHHHHHHHHHHhccc
Confidence 3444566 5 5899999997 4 9999999999999622 11 11234568889999999998653
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.94 E-value=3.5e-06 Score=75.28 Aligned_cols=54 Identities=13% Similarity=0.133 Sum_probs=44.4
Q ss_pred cCCeeccCCCceecCCCC--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC
Q psy11186 8 AGVKVIPENAKIDSDNEQ--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN 73 (212)
Q Consensus 8 ~gl~~~~~~G~I~Vd~~l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~ 73 (212)
.|++++ ++|+|.||+++ |+.|+|||+|||+. +...++..|..+|+.+|.||++.
T Consensus 330 ~gl~~d-~~g~i~vn~~~rvt~~pgvya~GD~~~-----------gp~~~i~~a~~~g~~~a~~i~~~ 385 (456)
T 1lqt_A 330 PGLPFD-DQSGTIPNVGGRINGSPNEYVVGWIKR-----------GPTGVIGTNKKDAQDTVDTLIKN 385 (456)
T ss_dssp TTSCCB-TTTTBCCEETTEETTCSSEEECTHHHH-----------CSCSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCccc-CCCCeeECCCCcCCCCCCEEEEeccCC-----------CCchhHHHHHHHHHHHHHHHHHH
Confidence 477787 67889999998 89999999999994 32335678999999999999753
No 82
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.78 E-value=1.1e-05 Score=72.59 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=44.5
Q ss_pred cccccCCee--ccCCCcee-cCCCCCCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC
Q psy11186 4 AVSNAGVKV--IPENAKID-SDNEQTNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN 73 (212)
Q Consensus 4 ~l~~~gl~~--~~~~G~I~-Vd~~lTs~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~ 73 (212)
.++++|+++ + ++|+|. ||++|.+.|+|||+|||+. +.++..|..||+++|.|+.+.
T Consensus 317 l~~~~g~~~~~~-~~g~i~~vd~~~~s~~~vya~GD~~~-------------~~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 317 PITQAGGKLRFR-RGYYSPVLDEYHRIKDGIYVAGSAVS-------------IKPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp HHHHTTCCEEEE-TTEEEECCCTTSEEETTEEECSTTTC-------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcccc-CCceeeccccccCcCCCEEEEeccCC-------------ccCHHHHHHHHHHHHHHHHHH
Confidence 356677764 4 478887 8988866799999999993 246788999999999999764
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.52 E-value=6.9e-05 Score=66.84 Aligned_cols=55 Identities=7% Similarity=-0.101 Sum_probs=42.6
Q ss_pred ccc-cCCeeccCCCceecCCC---C-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCC
Q psy11186 5 VSN-AGVKVIPENAKIDSDNE---Q-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNG 74 (212)
Q Consensus 5 l~~-~gl~~~~~~G~I~Vd~~---l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~ 74 (212)
|.+ +|++++ ++|++ ++.+ + |+.|+|||+|||+. ..+++.|..||+.+|+++.|..
T Consensus 281 l~~~~gl~~~-~~~~v-~~~~~~~~~t~~p~i~aiGd~~~-------------~~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 281 LNDDLRLVTN-NRLWP-LNLYKGVVWEDNPKFFYIGMQDQ-------------WYSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp BCTTTCCCCC-SSSCC-SSEETTTEESSSTTEEECSCSCC-------------SSCHHHHHHHHHHHHHHHTTSS
T ss_pred cCcccccccC-CCccc-ccccceEecCCCCCEEEEeCccc-------------ccchHHHHHHHHHHHHHHcCCC
Confidence 444 688887 45455 4533 5 99999999999883 2478999999999999999864
No 84
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.34 E-value=0.00013 Score=65.35 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=34.1
Q ss_pred CCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHH----HHHHHHHHhC
Q psy11186 16 NAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQA----GKLLAARLYG 72 (212)
Q Consensus 16 ~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~----g~~aa~nl~g 72 (212)
.|+|+||+++ |++|+|||+|||+.. . ..|...+.+.|..+ |+.++.++.+
T Consensus 316 ~GGI~vd~~~~t~ipgLyAaGd~a~~------~-~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 316 DGGIRVNIRGESNIVNLYAIGEVSDS------G-LHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp SCEEECCTTCBCSSBTEEECGGGEEC------S-SSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred CCCeEECCCCccccCCEEecchhccc------c-cCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 5789999999 999999999999841 0 11333566665555 5555555543
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.11 E-value=0.00022 Score=67.20 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=34.7
Q ss_pred ecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC
Q psy11186 20 DSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN 73 (212)
Q Consensus 20 ~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~ 73 (212)
.||++| |+.|+|||+|||+. +..+..|..||+.+|.||.+.
T Consensus 657 ~vd~~~~t~~~~VyAiGD~~~-------------~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 657 RESEWAENDIKGIYLIGDAEA-------------PRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp TGGGTGGGTCCEEEECGGGTS-------------CCCHHHHHHHHHHHHHTTTSS
T ss_pred hcccccccCCCCeEEEeCccc-------------hhhHHHHHHHHHHHHHHhhhh
Confidence 468899 99999999999993 335667999999999999764
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.08 E-value=0.00035 Score=67.88 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=36.6
Q ss_pred CCceecCCCC------CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 16 NAKIDSDNEQ------TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 16 ~G~I~Vd~~l------Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
+|+|.||+++ |+.|+|||+|||+ +.+.+. .|..||+++|.||.+
T Consensus 392 ~g~i~vd~~~~~~v~~ts~p~IyAaGD~a------------~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 392 QGKLDWDTTIHAFVPADAVANQHLAGAMT------------GRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp TCCEEEETTTTEEEECSCCTTEEECGGGG------------TCCSHH-HHHHHHHHHHHHHHH
T ss_pred CCcEEEcCcccccccCCCCCCEEEEEecC------------CchhHH-HHHHHHHHHHHHHHH
Confidence 5679999875 5899999999999 344555 899999999999974
No 87
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.46 E-value=0.0023 Score=51.42 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=28.9
Q ss_pred CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 26 TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 26 Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
|+.|+|||+|||+ .. + ....|.+||+.+|.||..
T Consensus 196 t~~p~iya~G~~a-~~---------g---~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 196 KRLEGLYAVGLCV-RE---------G---DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp TTSBSEEECGGGT-SC---------C---CHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeecc-cC---------c---cHHHHHHHHHHHHHHHHh
Confidence 8999999999999 21 3 667889999999999863
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.43 E-value=0.0031 Score=55.49 Aligned_cols=46 Identities=22% Similarity=0.133 Sum_probs=36.6
Q ss_pred CCceecCCCC----CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCC
Q psy11186 16 NAKIDSDNEQ----TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNG 74 (212)
Q Consensus 16 ~G~I~Vd~~l----Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~ 74 (212)
++.+.++.++ +++|+||++|||.. . .+++.|..||+.+|.++.|..
T Consensus 312 ~~~~~~~~~~~v~~~~~p~l~~~G~~~~------------~-~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 312 DGSHVHNVYQHIFYIPDPTLAFVGLALH------------V-VPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp SSSSCCSEETTTEETTCTTEEESSCCBS------------S-CHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCcccccccccccCCCCcEEEEecccc------------c-cCchHHHHHHHHHHHHHcCCC
Confidence 3556666553 68999999999983 2 378999999999999999853
No 89
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.37 E-value=0.003 Score=58.95 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=28.0
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN 73 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~ 73 (212)
+.|+|||+|||+. . .....|..||+.+|.||.+.
T Consensus 640 ~~~~VyaiGD~~~------------~-~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 640 EIASVRGIGDAWA------------P-GTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp SCSEEEECGGGTS------------C-BCHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCc------------h-hhHHHHHHHHHHHHHHHHhh
Confidence 6799999999993 2 34455999999999999865
No 90
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.0005 Score=58.05 Aligned_cols=55 Identities=11% Similarity=0.126 Sum_probs=35.4
Q ss_pred CCeeccCCCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHh
Q psy11186 9 GVKVIPENAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQE-KPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 9 gl~~~~~~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~-~~~l~~~A~~~g~~aa~nl~ 71 (212)
++++. .+.|.+|+.+ |+.|+|||+||++.. .+.... +| ..-.++..|+.||+.+.
T Consensus 265 ~~~~~--e~~iv~~~~~~t~vpGv~aaGDaa~~-----v~g~~rmGp-~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 265 DMNHA--EHDVVIHSGAYAGVDNMYFAGMEVAE-----LDGLNRMGP-TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CHHHH--HHHHHHHCEECTTSBTEEECTHHHHH-----HHTCCBCCS-CCHHHHHHHHHHHHHHH
T ss_pred ccccc--CCeEEECCCeEECCCCEEEEchHhcc-----ccCCCcCch-HHHHHHHHHHHHHHHHH
Confidence 34444 3568889999 999999999999841 111110 12 23345667888888765
No 91
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.68 E-value=0.0045 Score=54.40 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=34.2
Q ss_pred CceecCCCC-CC-----CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 17 AKIDSDNEQ-TN-----IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 17 G~I~Vd~~l-Ts-----~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|+|.||+++ +. .|+|||+|||... ++. ..+.+...|.+++++++.++-
T Consensus 392 g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~-----~g~--~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 392 GDHEIGRDYRLQTDERCKVAIYAQGFSQAS-----HGL--SDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp C--CCCTTSBCCBCTTBCSEEEESSCCHHH-----HCT--TTTSSTTHHHHHHHHHHHHHH
T ss_pred CCcccCcccccccCCCCCCeEEEcCCCccc-----CCc--CccchhHHHHHHHHHHHHHHh
Confidence 679999998 53 4569999999952 222 345677789999998877653
No 92
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.34 E-value=0.014 Score=53.65 Aligned_cols=49 Identities=24% Similarity=0.307 Sum_probs=32.6
Q ss_pred CCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchh----HHHHHHHHHHHHHHh
Q psy11186 16 NAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELT----PVAVQAGKLLAARLY 71 (212)
Q Consensus 16 ~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~----~~A~~~g~~aa~nl~ 71 (212)
-|+|.||.++ |++|++||+|+|+.. + ++ |...+. ..+.-.|++|+.++.
T Consensus 359 ~GGi~vd~~~~~~IpGLyAaGe~a~~-g--~h----Ganrl~gnsl~~~~vfGr~Ag~~aa 412 (602)
T 1kf6_A 359 MGGIETDQNCETRIKGLFAVGECSSV-G--LH----GANRLGSNSLAELVVFGRLAGEQAT 412 (602)
T ss_dssp CCEEECCTTSBCSSBTEEECGGGEEC-S--SS----TTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCccccCCEEEccccccc-c--cc----CCCCCccHHHHHHHHHHHHHHHHHH
Confidence 3779999999 999999999999830 0 11 111222 235555777777664
No 93
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.59 E-value=0.036 Score=51.69 Aligned_cols=39 Identities=8% Similarity=0.249 Sum_probs=26.3
Q ss_pred CCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 23 NEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 23 ~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+ |++|++||+|||+.. +.......+..+|++++.++.
T Consensus 446 ~~~~t~v~gl~a~Ge~~~~----------~~hg~~~~sl~~g~~ag~~a~ 485 (662)
T 3gyx_A 446 YNRMTTVEGLWTCADGVGA----------SGHKFSSGSHAEGRIVGKQMV 485 (662)
T ss_dssp CTTBCSSBTEECCSSSBCS----------CCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCCeEeCcccccc----------ccCccHhHHHHHHHHHHHHHH
Confidence 778 999999999999831 111235556666776666553
No 94
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.77 E-value=0.085 Score=47.79 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=33.4
Q ss_pred CCceecCCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCch----hHHHHHHHHHHHHHHhC
Q psy11186 16 NAKIDSDNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPEL----TPVAVQAGKLLAARLYG 72 (212)
Q Consensus 16 ~G~I~Vd~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l----~~~A~~~g~~aa~nl~g 72 (212)
-|+|.||++. |++|++||+|+|+.. + ++ |...+ ...+.-.|++|+.++..
T Consensus 354 ~GGi~vd~~~~t~I~GLyAaGE~a~~-g--~h----Ganrl~gnsl~~~~vfG~~Ag~~aa~ 408 (540)
T 1chu_A 354 CGGVMVDDHGRTDVEGLYAIGEVSYT-G--LH----GANRMASNSLLECLVYGWSAAEDITR 408 (540)
T ss_dssp SCEEECCTTCBCSSBTEEECGGGEEC-S--SS----TTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEECCCCCCccCCEEeccccccc-c--cc----CCCcCcchhHHHHHHHHHHHHHHHHH
Confidence 3779999999 999999999999830 0 11 11112 22355667777777653
No 95
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.35 E-value=0.096 Score=48.45 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=27.2
Q ss_pred CCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 23 NEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 23 ~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
... |++|++||+|+|+.. +...+...+..+|++++.++.
T Consensus 425 ~~~~t~I~GLyAaGe~a~~----------~~~r~~~~sl~~G~~ag~~aa 464 (643)
T 1jnr_A 425 YNRMTTVKGLFAIGDCAGA----------NPHKFSSGSFTEGRIAAKAAV 464 (643)
T ss_dssp CTTBCSSBTEEECGGGBCS----------CCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCceeCCEEeeeccccc----------cccccchhHHHHHHHHHHHHH
Confidence 556 999999999999941 112355566777777777654
No 96
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.84 E-value=0.13 Score=47.77 Aligned_cols=23 Identities=17% Similarity=0.397 Sum_probs=21.3
Q ss_pred CCceecCCCC-CCCCCeEEcCccC
Q psy11186 16 NAKIDSDNEQ-TNIPNVFAVGDVL 38 (212)
Q Consensus 16 ~G~I~Vd~~l-Ts~p~IyA~GD~a 38 (212)
-|+|.||.+. |++|++||+|+|+
T Consensus 372 ~GGi~vd~~~~v~IpGLYAaGE~a 395 (660)
T 2bs2_A 372 MGGIRTDYRGEAKLKGLFSAGEAA 395 (660)
T ss_dssp CCEEECCTTSBCSSBTEEECGGGE
T ss_pred cceEEECCCCceecCCEEeccccc
Confidence 4779999999 9999999999987
No 97
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.47 E-value=0.12 Score=39.80 Aligned_cols=38 Identities=18% Similarity=0.070 Sum_probs=29.6
Q ss_pred CCCC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 22 DNEQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 22 d~~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
++++ ++.++||++||++. | .-.+.|+..|+.+|..|..
T Consensus 287 ~~~~~~~~~~v~l~GDa~~-----------g--~gv~~A~~sG~~aA~~I~~ 325 (336)
T 3kkj_A 287 WGALSDADLGIYVCGDWCL-----------S--GRVEGAWLSGQEAARRLLE 325 (336)
T ss_dssp CSSEEETTTTEEECCGGGT-----------T--SSHHHHHHHHHHHHHHHHH
T ss_pred ccceeeCCCCEEEEecccC-----------C--cCHHHHHHHHHHHHHHHHH
Confidence 4455 78899999999884 3 2367899999999988863
No 98
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=91.92 E-value=0.1 Score=47.57 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=28.6
Q ss_pred eecCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 19 IDSDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 19 I~Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|.+|+.| | +.+++|+|||++ |-..-...|..+|..+|..++
T Consensus 497 i~~~~~~~~~~~~gly~~Gega------------G~a~gi~~Aa~~G~~~a~~i~ 539 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGA------------GYAGGILSAGIDGIKVAEAVA 539 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHH------------TSCCSHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccC------------ChhhHHHHHHHHHHHHHHHHH
Confidence 7899999 7 899999999999 322222334445666666554
No 99
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=90.85 E-value=0.27 Score=42.66 Aligned_cols=45 Identities=11% Similarity=0.085 Sum_probs=32.7
Q ss_pred cC-CCC--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 21 SD-NEQ--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 21 Vd-~~l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
|| +.| +..|++|++|++.+. +..+|+ -..+.|...|.+|+.++.+
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv------~g~~GG-ynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDV------TGWLGG-YNFQWAWSSAYACALSISR 400 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSC------EECTTT-HHHHHHHHHHHHHHHHHHT
T ss_pred CChhhccccCCCCEEEEEEeEEe------ccCCCC-HHHHHHHHHHHHHHHHHhc
Confidence 46 667 589999999999962 222344 3457788899999888754
No 100
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=87.60 E-value=0.23 Score=45.40 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.1
Q ss_pred CCceecCCCC-C----------CCCCeEEcCccC
Q psy11186 16 NAKIDSDNEQ-T----------NIPNVFAVGDVL 38 (212)
Q Consensus 16 ~G~I~Vd~~l-T----------s~p~IyA~GD~a 38 (212)
-|+|.||.+. + ++|+.||+|+|+
T Consensus 357 ~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a 390 (588)
T 2wdq_A 357 MGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIA 390 (588)
T ss_dssp CCBEEBCTTCEEEEECTTSCEEEEEEEEECGGGE
T ss_pred CceEEECCCCCCcccccccCCCeeCCceeCcccc
Confidence 3679999998 7 799999999986
No 101
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=86.36 E-value=0.65 Score=41.97 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=30.5
Q ss_pred CceecCCCC-------CCCCCeEEcCccCCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHh
Q psy11186 17 AKIDSDNEQ-------TNIPNVFAVGDVLHFSPFPVLPLFQEKPE--LTPVAVQAGKLLAARLY 71 (212)
Q Consensus 17 G~I~Vd~~l-------Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~--l~~~A~~~g~~aa~nl~ 71 (212)
|+|+||+++ |.+|++||+|+|+. + ++. .+++. -...+.-.||+|++++.
T Consensus 503 GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~--g--~~g--~~~~~g~sl~~~~v~Gr~Ag~~aa 560 (566)
T 1qo8_A 503 GGVAINTTASVLDLQSKPIDGLFAAGEVTG--G--VHG--YNRLGGNAIADTVVFGRIAGDNAA 560 (566)
T ss_dssp CEECBCTTCEEEBTTSCEEEEEEECSTTBC--S--SST--TCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred ccEEECCCCeEECCCCCEeCCEEecccccC--C--CCC--CCCCchhhHHHHHHHHHHHHHHHH
Confidence 557777775 46999999999983 0 110 01111 12346677888888765
No 102
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=81.49 E-value=1.1 Score=40.49 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=31.1
Q ss_pred CceecCCCC--------CCCCCeEEcCccCCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHhC
Q psy11186 17 AKIDSDNEQ--------TNIPNVFAVGDVLHFSPFPVLPLFQEKPE--LTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 17 G~I~Vd~~l--------Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~--l~~~A~~~g~~aa~nl~g 72 (212)
|+|+||+++ |.+|++||+|+|+. + ++. .+++. -...+.-.||+|++++..
T Consensus 508 GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~--g--~~g--~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 508 GGLVIDTKAEVKSEKTAKPITGLYAAGEVTG--G--VHG--ANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp CEEEBCTTCEEEBSSSSSEEEEEEECSTTEE--S--TTT--TSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEECCCCeEEcCCCCcccCCeeECeeccc--C--CCC--CCCCchHhHHHHHHHHHHHHHHHHH
Confidence 556666664 56899999999983 0 111 01111 123577778888888764
No 103
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=79.95 E-value=1.4 Score=39.84 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=30.6
Q ss_pred CceecCCCC-------CCCCCeEEcCccCCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHhC
Q psy11186 17 AKIDSDNEQ-------TNIPNVFAVGDVLHFSPFPVLPLFQEKPE--LTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 17 G~I~Vd~~l-------Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~--l~~~A~~~g~~aa~nl~g 72 (212)
|+|+||+++ |.+|++||+|+|+. + ++.. ++.. -...+.-.||+|++++..
T Consensus 508 GGl~id~~~~vl~~~g~~I~GLyAaGe~~~--g--~~g~--~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 508 GGVMIDTKAEVMNAKKQVIPGLYGAGEVTG--G--VHGA--NRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp CEEEBCTTCEEECTTSCEEEEEEECSTTEE--S--SSTT--SCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEECCCceEECCCCCCcCCcEeceEcCC--C--CcCC--CCCchHhHHHHHHHHHHHHHHHHH
Confidence 557777665 46899999999983 0 1100 1111 123467778888887753
No 104
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=79.86 E-value=1.2 Score=40.96 Aligned_cols=50 Identities=16% Similarity=0.181 Sum_probs=28.4
Q ss_pred CceecCCCC----------CCCCCeEEcCccCCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHh
Q psy11186 17 AKIDSDNEQ----------TNIPNVFAVGDVLHFSPFPVLPLFQEKPE--LTPVAVQAGKLLAARLY 71 (212)
Q Consensus 17 G~I~Vd~~l----------Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~--l~~~A~~~g~~aa~nl~ 71 (212)
|+|.||.+. |++|+.||+|+|+.. + ++.. ++.. -...+.-.|++|+.++.
T Consensus 368 GGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~-g--~hGa--nrlggnsL~~~~vfGr~Ag~~aa 429 (621)
T 2h88_A 368 GGIPTNYKGQVITHVNGEDKVVPGLYACGEAASA-S--VHGA--NRLGANSLLDLVVFGRACALTIA 429 (621)
T ss_dssp CBEEBCTTSEEEEEETTEEEEEEEEEECGGGEEC-S--SSTT--SCCTTSHHHHHHHHHHHHHHHHH
T ss_pred CcEeECCCCeEeecccCCCcccCceEEccccccc-c--ccCC--CCCchHhHHHHHHHHHHHHHHHH
Confidence 557777643 579999999998720 0 1110 1111 12245556777777665
No 105
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=76.51 E-value=1.9 Score=38.24 Aligned_cols=50 Identities=14% Similarity=0.075 Sum_probs=31.7
Q ss_pred CceecCCCC-------CCCCCeEEcCccCCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHhC
Q psy11186 17 AKIDSDNEQ-------TNIPNVFAVGDVLHFSPFPVLPLFQEKPE--LTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 17 G~I~Vd~~l-------Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~--l~~~A~~~g~~aa~nl~g 72 (212)
|+|.||+++ +.+|++||+|.|+. + ++.. +... -.-.+.-.||+|++++.+
T Consensus 450 GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~g--g--~~g~--~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 450 GGLRTTVNSEVLHVSGEPIPGLFAAGRCTS--G--VCAG--GYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp CEECBCTTCEEEBTTSSEEEEEEECGGGBC--C--SCSS--SCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred cCeeECCCCceECCCCCCcCCeeeceeccc--C--CCcC--CCCcHHhHHHHHHHHHHHHHHHHh
Confidence 557777664 35899999999984 1 1110 1111 123577889999998764
No 106
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=75.46 E-value=2.2 Score=37.13 Aligned_cols=48 Identities=10% Similarity=0.185 Sum_probs=32.2
Q ss_pred CceecCC---C-C--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 17 AKIDSDN---E-Q--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 17 G~I~Vd~---~-l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|+|.+|+ . | ..+|++||+|.++. +.. ..|+. ....|.-.|++|+.++.
T Consensus 387 GGv~~~~i~~~t~~~~~i~GLy~aGEv~~-----v~g-~~GG~-~l~~a~~~G~~Ag~~aa 440 (447)
T 2i0z_A 387 GGVSVKEINPKEMSSKFTNGLYFCGEVLD-----IHG-YTGGY-NITSALVTGRIAGTTAG 440 (447)
T ss_dssp EEECGGGEETTTTEESSSBTEEECGGGBS-----CBC-CTTTH-HHHHHHHHHHHHHHHHH
T ss_pred CceeeecccccccccCcCCCEEEEEeecc-----Ccc-CCCcH-HHHHHHHHHHHHHHHHH
Confidence 5588876 2 3 46999999999996 322 22332 34667777888887764
No 107
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=74.77 E-value=3.4 Score=34.20 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=32.3
Q ss_pred CceecCCCC--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 17 AKIDSDNEQ--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 17 G~I~Vd~~l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|.+.+.... ...++|+.+||+++ ..++.+| +=...|+..|+.+|..+.
T Consensus 263 ~~~~~~~~~~~~~~~~v~lvGDAA~-----~~~P~~G--~Gi~~A~~~g~~~A~~i~ 312 (397)
T 3oz2_A 263 GGVSVSKVKMPITMPGLMLVGDAAR-----LIDPITG--GGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp EEEECCCCCSCCEETTEEECGGGGT-----CSCTTTC--CCHHHHHHHHHHHHHHHH
T ss_pred ccccccCcccceeeeeEEEcccccc-----cCCCCcc--hhHHHHHHHHHHHHHHHH
Confidence 445554443 56789999999997 3344433 235678888888887764
No 108
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=66.65 E-value=5.4 Score=36.93 Aligned_cols=38 Identities=16% Similarity=0.115 Sum_probs=27.2
Q ss_pred cCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 21 SDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 21 Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+..| | ..|++|.+|.+. |...+. .|..||.+|+.|+.
T Consensus 380 l~~tLe~k~~~gLf~AGqin------------Gt~Gye-EAaaqGl~AG~nAa 419 (637)
T 2zxi_A 380 LYPTLETKKIRGLFHAGNFN------------GTTGYE-EAAGQGIVAGINAA 419 (637)
T ss_dssp BCTTSBBSSSBTEEECGGGG------------TBCSHH-HHHHHHHHHHHHHH
T ss_pred cCccccccCCCCEEEeeecC------------CcchHH-HHHHHHHHHHHHHH
Confidence 34677 5 589999999998 432232 67778888887764
No 109
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=65.63 E-value=6.4 Score=36.44 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=26.1
Q ss_pred CCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 23 NEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 23 ~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..| | ..|++|++|+++. ...+. .|..+|.+|+.|+.
T Consensus 371 ~tle~k~~~gLf~AGqi~g------------~~Gy~-eA~a~G~~AG~naa 408 (641)
T 3cp8_A 371 STMETRPVENLFFAGQING------------TSGYE-EAAAQGLMAGINAV 408 (641)
T ss_dssp TTSBBSSSBTEEECSGGGT------------BCCHH-HHHHHHHHHHHHHH
T ss_pred CcccccCcCCEEEEEeecC------------CccHH-HHHHHHHHHHHHHH
Confidence 578 5 6999999999993 22233 67777777777764
No 110
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=65.44 E-value=4.6 Score=35.04 Aligned_cols=46 Identities=13% Similarity=0.208 Sum_probs=32.4
Q ss_pred CceecCC---C-C--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11186 17 AKIDSDN---E-Q--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAAR 69 (212)
Q Consensus 17 G~I~Vd~---~-l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~n 69 (212)
|+|.+++ . | ..+|++|++|.+.+. +..+|++ ..+.|...|..|+..
T Consensus 365 GGV~~~ei~~~tmesk~~~gLy~aGE~lD~------~~~~GGy-nlq~a~stG~~ag~~ 416 (417)
T 3v76_A 365 GGVDTRALDSRTMQAKEVPGLYFVGECVDV------TGWLGGY-NFQWAWASGFVAGQD 416 (417)
T ss_dssp EEECGGGBCTTTCBBTTSTTEEECGGGBSE------EECSSSH-HHHHHHHHHHHHHHH
T ss_pred CCCccccCChhhccccCCCCeEEEEEeEec------ccCCCCH-HHHHHHHHHHHHhCc
Confidence 5577764 3 6 689999999999962 3334543 457888888877764
No 111
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=61.23 E-value=8.9 Score=35.57 Aligned_cols=69 Identities=12% Similarity=0.020 Sum_probs=42.8
Q ss_pred cCCCC-C-CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCCcCCCcccceeEEEcCCceeeecC
Q psy11186 21 SDNEQ-T-NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGL 98 (212)
Q Consensus 21 Vd~~l-T-s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~~~~~~~~~~~~~~~~~~~~ia~vGl 98 (212)
.+..| | ..|++|.+|.+. |...+. .|..||.+|+.|+.-.... . -| ...+.+-+++|.
T Consensus 375 L~~tle~k~~~gLf~AGqin------------GttGYe-EAaaqGl~AG~nAa~~~~~---~--~~--~~~~r~~ayiG~ 434 (651)
T 3ces_A 375 LKPTLESKFIQGLFFAGQIN------------GTTGYE-EAAAQGLLAGLNAARLSAD---K--EG--WAPARSQAYLGV 434 (651)
T ss_dssp BCTTSBBSSSBTEEECSGGG------------TCCCHH-HHHHHHHHHHHHHHHHHTT---C--CC--CCCCTTTCHHHH
T ss_pred cCccccccCCCCeEEEEEec------------CCcChH-HHHHHHHHHHHHHHHHhcC---C--CC--CCCChhhhhhhh
Confidence 34677 4 689999999998 433333 7888888888887521100 0 00 112366677777
Q ss_pred CHHHHHHhhCC
Q psy11186 99 SEEKAEELYGA 109 (212)
Q Consensus 99 t~~~a~~~~~~ 109 (212)
-.+++..+|..
T Consensus 435 liddl~t~g~~ 445 (651)
T 3ces_A 435 LVDDLCTLGTK 445 (651)
T ss_dssp HHHHHHHHSSC
T ss_pred HHHHHHHhccc
Confidence 77777666543
No 112
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=58.64 E-value=3 Score=33.89 Aligned_cols=41 Identities=10% Similarity=0.092 Sum_probs=29.2
Q ss_pred CC-CCCCCeEEcCccCCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHhC
Q psy11186 24 EQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKP---ELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 24 ~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~---~l~~~A~~~g~~aa~nl~g 72 (212)
+. |+.|+||++||++.. ..+.+ +.+..+..+|+.+|.++..
T Consensus 228 ~~~~~~p~i~a~G~~~~~--------~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 228 LTREVVPGMIVTGMEVAE--------IDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HCEEEETTEEECTHHHHH--------HHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEeeehhh--------hcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 45 778999999998841 01222 2466788999999999864
No 113
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=58.59 E-value=6.2 Score=35.20 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=27.3
Q ss_pred CCCCCeEEc-CccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 26 TNIPNVFAV-GDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 26 Ts~p~IyA~-GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
.+.||+|++ |+.+. .+.+.+++.|.+|++.+|++|..
T Consensus 426 ~~~Pn~f~~~G~~~~----------~~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 426 AGFPNLFFIAGPGSP----------SALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp TTSTTEEESSCTTSS----------GGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEcCCCCC----------cccccHHHHHHHHHHHHHHHHHH
Confidence 467888887 87652 02345678999999999999863
No 114
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=48.51 E-value=18 Score=30.61 Aligned_cols=33 Identities=15% Similarity=-0.017 Sum_probs=26.8
Q ss_pred CCCCCeEEcCccCCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHH
Q psy11186 26 TNIPNVFAVGDVLHFSPFPVLPLFQEK-PELTPVAVQAGKLLAARL 70 (212)
Q Consensus 26 Ts~p~IyA~GD~a~~~~~~~~~~~~~~-~~l~~~A~~~g~~aa~nl 70 (212)
+. |++|.+||... +. ..+..-|...|+.||+.+
T Consensus 370 ~~-~gl~laGd~~~-----------~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 370 PL-NEVLVVGDGYR-----------PPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp CC-SSEEECSTTCC-----------CTTCCHHHHHHHHHHHHHHHT
T ss_pred CC-CcEEEECCccc-----------CCCceeeehHHHHHHHHHHHh
Confidence 56 99999999884 33 346688999999999987
No 115
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=38.89 E-value=33 Score=29.42 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=26.4
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.++|+.+||+++ ..++.+| +-...|+..|..+|..+.
T Consensus 281 ~~~v~lvGDAAh-----~~~P~~G--~G~~~Ai~da~~la~~l~ 317 (453)
T 3atr_A 281 WNGIIVIGDSGF-----TVNPVHG--GGKGSAMISGYCAAKAIL 317 (453)
T ss_dssp ETTEEECGGGGT-----CSCTTTC--CCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCccc-----CCCCCcc--ccHHHHHHHHHHHHHHHH
Confidence 578999999997 4444443 345678888888877664
No 116
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=35.12 E-value=44 Score=28.33 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=28.9
Q ss_pred CC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 24 EQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 24 ~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+ +..+++|.+||..+. .-+...+-|...|+.+|+.++
T Consensus 410 ~~~~p~~~l~~aG~~~~~----------~~~g~v~gA~~SG~~aA~~i~ 448 (453)
T 2yg5_A 410 DSRTPVGPIHFSCSDIAA----------EGYQHVDGAVRMGQRTAADII 448 (453)
T ss_dssp GTTCCBTTEEECCGGGCS----------TTTTSHHHHHHHHHHHHHHHH
T ss_pred HHhCCcCceEEeeccccc----------ccccchHHHHHHHHHHHHHHH
Confidence 46 788999999997741 112356889999999999876
No 117
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=32.98 E-value=50 Score=27.15 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=26.2
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..++|+.+||++. ..++.+| .-...|...|..+|..+.
T Consensus 275 ~~~~v~liGDAa~-----~~~P~~G--~G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 275 TMPGLMLVGDAAR-----LIDPITG--GGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp EETTEEECGGGGT-----CSCTTTC--CCHHHHHHHHHHHHHHHH
T ss_pred eeCCEEEEEcccc-----CCCCCCC--CCHHHHHHHHHHHHHHHH
Confidence 4578999999997 3344433 234678888887777664
No 118
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=31.96 E-value=35 Score=28.61 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=24.4
Q ss_pred CCCCCeEEcCccCCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHhC
Q psy11186 26 TNIPNVFAVGDVLHFSPFPVLPLFQEK-PELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 26 Ts~p~IyA~GD~a~~~~~~~~~~~~~~-~~l~~~A~~~g~~aa~nl~g 72 (212)
|..+++|.+||-.. +. ..-.+-+...|+.+++.|+|
T Consensus 389 ~p~~gL~laG~~~~-----------~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 389 TPFSGLYVVGDGAK-----------GKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp CSSBTEEECSTTSC-----------CTTCCHHHHHHHHHHHHHHC---
T ss_pred CCcCCeEEeCCccC-----------CCCCCccHHHHHHHHHHHHHhhC
Confidence 56789999999874 21 23456777888888887765
No 119
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=31.74 E-value=33 Score=30.22 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=25.7
Q ss_pred CCCC--CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 22 DNEQ--TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 22 d~~l--Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
+..| ...+++|.+|+.+ |.-.+ ..|..+|.+|+.|+.
T Consensus 320 ~~tle~k~~~~Lf~AGqi~------------G~~Gy-~eAaa~Gl~AG~naa 358 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLA------------GVEGY-LESAATGFLAGLNAA 358 (443)
T ss_dssp CTTSEETTEEEEEECGGGG------------TBCSH-HHHHHHHHHHHHHHH
T ss_pred ChhceecCCCCEEECcccc------------ccHHH-HHHHHhHHHHHHHHH
Confidence 4778 4799999999988 33222 256667777776664
No 120
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=31.43 E-value=55 Score=27.27 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=26.0
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+++..+||++. ..++..| .=...|...|..+|+.+.
T Consensus 287 ~~~v~lvGDAa~-----~~~P~~G--~G~~~A~~~a~~la~~l~ 323 (421)
T 3nix_A 287 GDGFVLTGNATE-----FLDPIFS--SGATFAMESGSKGGKLAV 323 (421)
T ss_dssp ETTEEECGGGTC-----BCCSTTC--CHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEeccccc-----ccCCccc--ccHHHHHHHHHHHHHHHH
Confidence 478999999997 3344433 234678888888887765
No 121
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=31.41 E-value=48 Score=27.71 Aligned_cols=37 Identities=19% Similarity=0.035 Sum_probs=28.2
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+|..+||+++ ..++..| +=...|++.|..+|..|.
T Consensus 300 ~~rv~LvGDAAh-----~~~P~~G--qG~~~al~da~~La~~L~ 336 (407)
T 3rp8_A 300 RGRVALLGDAGH-----STTPDIG--QGGCAAMEDAVVLGAVFR 336 (407)
T ss_dssp ETTEEECGGGTC-----CCCGGGS--CHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEcccc-----cCCcchh--hhHHHHHHHHHHHHHHHh
Confidence 468999999997 4444433 346789999999999886
No 122
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=30.08 E-value=57 Score=24.51 Aligned_cols=37 Identities=16% Similarity=0.065 Sum_probs=29.2
Q ss_pred CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCC
Q psy11186 26 TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYGN 73 (212)
Q Consensus 26 Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g~ 73 (212)
+...+||.+|+-.+ .-+...+-|+..|+.+|..++..
T Consensus 115 ~p~grl~FAGe~ts-----------~~~g~~eGAl~SG~raA~~i~~~ 151 (181)
T 2e1m_C 115 RPEGPVYFAGEHVS-----------LKHAWIEGAVETAVRAAIAVNEA 151 (181)
T ss_dssp SCBTTEEECSGGGT-----------TSTTSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEEHHHc-----------CCccCHHHHHHHHHHHHHHHHHH
Confidence 55678999999884 12346788999999999998854
No 123
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=28.78 E-value=45 Score=28.70 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=19.5
Q ss_pred CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 26 TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 26 Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
|.+|++|-+||-+. + | .-.+-|...|+.+|+.|+
T Consensus 455 t~i~gLyl~G~~t~-p---------G--~Gv~ga~~SG~~aA~~il 488 (501)
T 4dgk_A 455 KTITNLYLVGAGTH-P---------G--AGIPGVIGSAKATAGLML 488 (501)
T ss_dssp -CCTTEEECCCH------------------HHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCC-C---------c--ccHHHHHHHHHHHHHHHH
Confidence 67899999999773 1 1 123455556666666554
No 124
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=27.56 E-value=65 Score=28.90 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=26.9
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..++|+.+||+++ ..++..| +=.+.|+..|..+|..+.
T Consensus 345 ~~~rv~LvGDAAh-----~~~P~~G--qG~~~Ai~da~~LA~~L~ 382 (584)
T 2gmh_A 345 TFPGGLLIGCSPG-----FMNVPKI--KGTHTAMKSGTLAAESIF 382 (584)
T ss_dssp EETTEEECTTTTC-----CCBTTTT--BCHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEccccc-----ccCcccc--ccHHHHHHHHHHHHHHHH
Confidence 3478999999997 3333333 346788888888888764
No 125
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=26.80 E-value=50 Score=27.44 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=26.8
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+|+.+||+++ ..++..| +=...|.+.|..+|..+.
T Consensus 285 ~~rv~lvGDAAh-----~~~P~~G--qG~~~al~da~~La~~L~ 321 (399)
T 2x3n_A 285 ADNVAMLGDAIH-----NVHPITG--QGMNLAIEDASALADALD 321 (399)
T ss_dssp ETTEEECGGGTE-----ECCGGGC--CHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEechhc-----cCCCccc--ccHHHHHHHHHHHHHHHH
Confidence 478999999997 3344333 345778888888888775
No 126
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=26.13 E-value=46 Score=20.57 Aligned_cols=28 Identities=11% Similarity=0.116 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHCCCCHHHHhhcccCC
Q psy11186 158 AGEVIQGYAAAVKCGLTFETLESTVGIH 185 (212)
Q Consensus 158 a~~~i~~~~~ai~~~~t~~~l~~~~~~~ 185 (212)
..+.+..+..|.+.|++++++...+..+
T Consensus 12 d~ewl~LI~~Ak~lGlsleEIrefL~l~ 39 (57)
T 1b0n_B 12 DQEWVELMVEAKEANISPEEIRKYLLLN 39 (57)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 3588999999999999999999855433
No 127
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=25.54 E-value=60 Score=28.38 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=26.0
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.++|..+||+++ ..++..| +-.+.|...|..+|..+.
T Consensus 295 ~~~vvlvGDAAh-----~~~P~~G--qG~~~Al~dA~~La~~L~ 331 (512)
T 3e1t_A 295 KNGMALVGDAAC-----FVDPVFS--SGVHLATYSALLVARAIN 331 (512)
T ss_dssp CSSEEECGGGTE-----ECCSTTC--CHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEechhh-----cCCCccc--cCHHHHHHHHHHHHHHHH
Confidence 578999999997 4444444 345677778877777664
No 128
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=24.03 E-value=80 Score=26.13 Aligned_cols=37 Identities=24% Similarity=0.197 Sum_probs=27.3
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+|..+||+++ ..++..| +=...|++.|..+|..+.
T Consensus 261 ~grv~LvGDAAh-----~~~P~~G--qG~~~al~Da~~La~~L~ 297 (381)
T 3c4a_A 261 DGKLVLLGDALQ-----SGHFSIG--HGTTMAVVVAQLLVKALC 297 (381)
T ss_dssp ETTEEECGGGTC-----CCCGGGC--CHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEcccc-----ccCCCcc--ccHHHHHHHHHHHHHHHh
Confidence 367999999997 3333333 346789999999988875
No 129
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=23.78 E-value=78 Score=25.62 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=26.7
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
..|++|.+||-.. | .-.+-|+++|+.+|+.++.
T Consensus 308 ~~~~l~laGd~~~-----------g--~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 308 HKPFLACGGDGFT-----------Q--SNFDGCITSALCVLEALKN 340 (342)
T ss_dssp TTTEEEECSGGGS-----------C--SSHHHHHHHHHHHHHHHTT
T ss_pred CCccEEEEccccC-----------C--CCccHHHHHHHHHHHHHHh
Confidence 5689999999774 3 2567899999999998864
No 130
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=23.60 E-value=62 Score=26.74 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=26.7
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+|..+||+++ ..++..| +=...|++.|..+|..+.
T Consensus 278 ~grv~LvGDAAh-----~~~P~~G--qG~~~ai~da~~La~~L~ 314 (394)
T 1k0i_A 278 HGRLFLAGDAAH-----IVPPTGA--KGLNLAASDVSTLYRLLL 314 (394)
T ss_dssp ETTEEECGGGTE-----ECCGGGT--CHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEechhh-----cCCCccc--chHHHHHHHHHHHHHHHH
Confidence 478999999997 3333333 345778888888888774
No 131
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=23.44 E-value=90 Score=27.07 Aligned_cols=38 Identities=16% Similarity=0.143 Sum_probs=28.3
Q ss_pred CC-CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 24 EQ-TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 24 ~l-Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
.+ +..+++|-+||.... .-+...+-|...|+.+|+.++
T Consensus 413 ~l~~p~~~L~fAG~~t~~----------~~~g~v~GAi~SG~~aA~~i~ 451 (520)
T 1s3e_A 413 VLRQPVDRIYFAGTETAT----------HWSGYMEGAVEAGERAAREIL 451 (520)
T ss_dssp GTTCCBTTEEECSGGGCS----------SSTTSHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCEEEeehhhcC----------cCcEEhHHHHHHHHHHHHHHH
Confidence 46 778999999997631 112356788999999998876
No 132
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=22.74 E-value=79 Score=28.53 Aligned_cols=38 Identities=18% Similarity=0.114 Sum_probs=24.3
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+++.++||++. ..++..| .-.+.|...|..+|..+.
T Consensus 306 ~~~rvvLIGDAAh-----~~~Pl~G--qGinlAl~dA~~LA~~L~ 343 (591)
T 3i3l_A 306 SADRFFLCGDAAC-----FTDPLFS--QGVHLASQSAVSAAAAID 343 (591)
T ss_dssp EETTEEECGGGTC-----BCCGGGC--CHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEccccc-----cCCCccc--ccHHHHHHHHHHHHHHHH
Confidence 3578999999997 3344433 234566666666666553
No 133
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=22.38 E-value=86 Score=26.05 Aligned_cols=38 Identities=16% Similarity=0.060 Sum_probs=27.6
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
..+|+-+||+++ ..++..| +=...|++.|..+|..+.+
T Consensus 298 ~grv~LiGDAAH-----~~~P~~G--qG~n~ai~DA~~La~~L~~ 335 (397)
T 2vou_A 298 HGRVLLIGDAAV-----TPRPHAA--AGGAKASDDARTLAEVFTK 335 (397)
T ss_dssp ETTEEECGGGTS-----BCCGGGS--CHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEecccc-----ccCCcch--hhHHHHHHHHHHHHHHHhc
Confidence 468999999997 3333333 3457889999998888764
No 134
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=22.05 E-value=51 Score=27.29 Aligned_cols=38 Identities=21% Similarity=0.078 Sum_probs=27.8
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
..+|+.+||+++ ..++..| +-...|+..|..+|..|.+
T Consensus 280 ~~rv~lvGDAAh-----~~~P~~G--qG~~~ai~da~~La~~L~~ 317 (379)
T 3alj_A 280 RGKVALVGDAAH-----AMCPALA--QGAGCAMVNAFSLSQDLEE 317 (379)
T ss_dssp ETTEEECTHHHH-----CCCGGGS--CHHHHHHHHHHHHHHHTTS
T ss_pred cCcEEEEEcccC-----CCCcchh--hhHHHHHHHHHHHHHHhcc
Confidence 368999999997 3333333 3467899999999888754
No 135
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=21.41 E-value=1e+02 Score=24.56 Aligned_cols=33 Identities=21% Similarity=0.145 Sum_probs=26.1
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
..++|+.+||.+. + .-.+.|.+.|..+|..+..
T Consensus 293 ~~~rl~laGDa~~-----------g--~gv~~a~~sg~~lA~~l~~ 325 (336)
T 1yvv_A 293 ADLGIYVCGDWCL-----------S--GRVEGAWLSGQEAARRLLE 325 (336)
T ss_dssp TTTTEEECCGGGT-----------T--SSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCC-----------C--CCHHHHHHHHHHHHHHHHH
Confidence 4589999999884 3 2567899999999888763
No 136
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=21.22 E-value=96 Score=26.51 Aligned_cols=37 Identities=16% Similarity=0.045 Sum_probs=27.9
Q ss_pred CCCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhC
Q psy11186 26 TNIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLYG 72 (212)
Q Consensus 26 Ts~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~g 72 (212)
+..++||-+||.+.. +-+...+-|...|+.+|+.++.
T Consensus 420 ~p~~~l~fAG~~t~~----------~~~g~v~GA~~SG~~aA~~i~~ 456 (472)
T 1b37_A 420 APVGRVYFTGEHTSE----------HYNGYVHGAYLSGIDSAEILIN 456 (472)
T ss_dssp CCBTTEEECSGGGCT----------TTTTSHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEeecccCC----------CCCCchhHHHHHHHHHHHHHHH
Confidence 778899999998841 1134678888889888888763
No 137
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.20 E-value=77 Score=25.98 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=27.0
Q ss_pred CCCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 27 NIPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 27 s~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
...+|+-+||+++ ..++..| +=...|+++|..+|..|.
T Consensus 309 ~~grv~LiGDAAH-----~~~P~~G--qG~n~ai~DA~~La~~L~ 346 (412)
T 4hb9_A 309 KSSTVTLLGDAIH-----NMTPMTG--SGANTALRDALLLTQKLA 346 (412)
T ss_dssp CCCSEEECTHHHH-----CSSCCSS--SHHHHHHHHHHHHHHHHH
T ss_pred cccCEEEEEcccc-----cCCCchh--hHHHHHHHHHHHHHHHHH
Confidence 3568999999997 3344333 346788888888887764
No 138
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=20.90 E-value=70 Score=26.78 Aligned_cols=37 Identities=24% Similarity=0.228 Sum_probs=27.3
Q ss_pred CCCeEEcCccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q psy11186 28 IPNVFAVGDVLHFSPFPVLPLFQEKPELTPVAVQAGKLLAARLY 71 (212)
Q Consensus 28 ~p~IyA~GD~a~~~~~~~~~~~~~~~~l~~~A~~~g~~aa~nl~ 71 (212)
..+|+.+||+++ ..++..| +=...|++.|..+|..|.
T Consensus 302 ~grv~LvGDAAh-----~~~P~~G--qG~n~ai~Da~~La~~L~ 338 (410)
T 3c96_A 302 RGRITLLGDAAH-----LMYPMGA--NGASQAILDGIELAAALA 338 (410)
T ss_dssp BTTEEECTHHHH-----CCCSSTT--CTHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEecccC-----CCCCccc--hhHHHHHHHHHHHHHHHh
Confidence 468999999997 3444333 346788999988888775
Done!