BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11187
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLET-DKSSTPVCE 61
+L+EAA F E + ++ + +E + +P Y IK N+P+G V++ T D S P C
Sbjct: 1837 ALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCN 1896
Query: 62 CD--ESSPCGVGSSCINSSI 79
C + +PCG+ S CIN +
Sbjct: 1897 CKATDENPCGIDSECINRML 1916
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLET-DKSSTPVCE 61
+L+EAA F E + ++ + +E + +P Y IK N+P+G V++ T D S P C
Sbjct: 1735 ALQEAAARFEELKARKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCN 1794
Query: 62 CD--ESSPCGVGSSCINSSI 79
C + +PCG+ S CIN +
Sbjct: 1795 CKATDENPCGIDSECINRML 1814
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1
SV=1
Length = 1365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLET-DKSSTPVCE 61
+L+EA FRE + R+ ET E +P Y IK NKP G V++ T D S P C
Sbjct: 961 ALQEAEARFREIKLQRE---ARETQESERKPPPYKHIKVNKPYGKVQIYTADISEIPKCN 1017
Query: 62 CD--ESSPCGVGSSCINSSI 79
C + +PCG S C+N +
Sbjct: 1018 CKPTDENPCGFDSECLNRML 1037
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLET-DKSSTPVCE 61
+L EAA+ F+E + R+ + E + + +P Y IK NK +G V+++ D S P C
Sbjct: 1040 ALEEAAKRFQELKAQRESKEALEIEKNSRKPPPYKHIKANKVIGKVQIQVADLSEIPRCN 1099
Query: 62 CD--ESSPCGVGSSCINSSI 79
C + +PCG+ S C+N +
Sbjct: 1100 CKPADENPCGLESECLNRML 1119
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLET-DKSSTPVCE 61
+L EAA+ F+E + R+ + E + +P Y IK NK +G V+++ D S P C
Sbjct: 1043 ALEEAAKRFQELKAQRESKEALEMERTSRKPPPYKHIKANKVIGKVQVQVADLSEIPRCN 1102
Query: 62 C--DESSPCGVGSSCIN 76
C + +PCG+ S C+N
Sbjct: 1103 CKPGDENPCGLESQCLN 1119
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=1
SV=2
Length = 1365
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLET-DKSSTPVCE 61
+L+EA F E + R+ ET E +P Y IK NKP G V++ T D S P C
Sbjct: 961 ALQEAEARFNEVKLQRE---ARETQESERKPPPYKHIKVNKPYGKVQIYTADISEIPKCN 1017
Query: 62 CD--ESSPCGVGSSCINSSI 79
C + +PCG S C+N +
Sbjct: 1018 CKPTDENPCGSDSECLNRML 1037
>sp|Q8MT36|MES4_DROME Probable histone-lysine N-methyltransferase Mes-4 OS=Drosophila
melanogaster GN=Mes-4 PE=1 SV=2
Length = 1427
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 2 TSLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLETDKSSTPVCE 61
T + EA+ + R E + P YVKIKTNK V +R + C
Sbjct: 1129 TGVEEASRFLPIIKARRQEQDMERQSGNKLHPPPYVKIKTNKAVPPLRFSQNLEDLSTCN 1188
Query: 62 C---DESSPCGVGSSCINSSI 79
C DE PCG + C+N +
Sbjct: 1189 CLPVDE-HPCGPEAGCLNRML 1208
>sp|P74360|Y1526_SYNY3 Uncharacterized protein sll1526 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1526 PE=4 SV=1
Length = 506
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 33 PSKYVKIKTNKPVGTVRLETDKSSTPVCECDESSPCGVG 71
P K +K+K P+G V L+ +K P+CE E+ P +G
Sbjct: 323 PIKSIKLKQQFPLGEVELQ-EKVYRPICEALENGPLTLG 360
>sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Glycine max GN=MCCA PE=1 SV=2
Length = 731
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 7 AAEAFREFQRNRDRIKTEETNERASRPSKYVKIK-TNKPVGTVRLETDKSSTPVCE 61
++ FR + + R++ E NE S SK +K+ T +P G +ET+++ +PV E
Sbjct: 532 SSPPFRIHHQAKRRMELEWDNEYGSGSSKIMKLTITYQPDGRYLIETEQNGSPVLE 587
>sp|Q05895|TSP3_MOUSE Thrombospondin-3 OS=Mus musculus GN=Thbs3 PE=1 SV=2
Length = 956
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 61 ECDESSPCGVGSSCINSSIGQSAESC 86
EC + PC GSSCIN+ G E+C
Sbjct: 319 ECAHADPCFPGSSCINTMPGFHCEAC 344
>sp|P49746|TSP3_HUMAN Thrombospondin-3 OS=Homo sapiens GN=THBS3 PE=2 SV=1
Length = 956
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 61 ECDESSPCGVGSSCINSSIGQSAESC 86
EC + PC GSSCIN+ G E+C
Sbjct: 319 ECAHADPCFPGSSCINTMPGFHCEAC 344
>sp|Q8JHW2|TSP3A_DANRE Thrombospondin-3a OS=Danio rerio GN=thbs3a PE=2 SV=2
Length = 962
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 61 ECDESSPCGVGSSCINSSIGQSAESC 86
EC E+ PC +C+N++ G + ESC
Sbjct: 322 ECSEAQPCYTPGACVNTARGFTCESC 347
>sp|Q2XVR3|SC4AA_DANRE Sodium channel protein type 4 subunit alpha A OS=Danio rerio
GN=scn4aa PE=2 SV=2
Length = 1829
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 3 SLREAAEAFREFQRNRDRIKTEETNERASRPSKYVKIKTNKPVGTVRLETDKSSTPVC 60
+L EA + EFQR +++K +ET +AS S+ + + + G++ D+ C
Sbjct: 424 TLAEARDKEEEFQRLLEQLKNQETGSKASLASQKTQSRGSNRTGSLHDLADEDVIKDC 481
>sp|Q8HZJ4|CABP4_BOVIN Calcium-binding protein 4 OS=Bos taurus GN=CABP4 PE=2 SV=1
Length = 279
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 1 MTSLREAAEAFREFQRNRD-RIKTEETNERA 30
M LRE AFREF R+RD RI E E A
Sbjct: 209 MLGLRELRIAFREFDRDRDGRITVAELREAA 239
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 4/23 (17%)
Query: 58 PVCECD----ESSPCGVGSSCIN 76
P CE D E+ PCG G++CIN
Sbjct: 4238 PTCEIDVDECENQPCGNGATCIN 4260
>sp|O18023|YPG43_CAEEL Ig-like and fibronectin type-III domain-containing protein C25G4.10
OS=Caenorhabditis elegans GN=C25G4.10 PE=1 SV=4
Length = 1526
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 61 ECDESSPCGVGSSCIN 76
ECD+S PCG G SC++
Sbjct: 111 ECDDSKPCGDGFSCVD 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.120 0.324
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,215,451
Number of Sequences: 539616
Number of extensions: 1204164
Number of successful extensions: 4469
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 4189
Number of HSP's gapped (non-prelim): 298
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)