RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11191
(81 letters)
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 107 bits (268), Expect = 1e-30
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQS 62
SK AA+N R+L++DLK D ++ PGWV+T++GG NA L V +TA +I
Sbjct: 174 MSK--AAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNK 231
Query: 63 LGEAHNGGFFEYTGKAIKW 81
L +HNG FF K ++
Sbjct: 232 LDNSHNGRFFMRNLKPYEF 250
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 107 bits (268), Expect = 1e-30
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQS 62
+SK +ALNAAT+SLS+DL +I+ ++HPGWVKTDMGGS+APL+V +T I+Q I
Sbjct: 191 TSK--SALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISK 248
Query: 63 LGEAHNGGFFEYTGKAIKW 81
LGE NGGF Y G + W
Sbjct: 249 LGEKQNGGFVNYDGTPLAW 267
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 54.2 bits (130), Expect = 1e-10
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL--EVGAATAGIIQFI 60
+SK A LNA TR L+ + + PG VKT+M E GA +++
Sbjct: 238 TSK--ACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGNYTAEEGAEH--VVRIA 291
Query: 61 QSLGEAHNGGFFE 73
+ +G F++
Sbjct: 292 LFPDDGPSGFFYD 304
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 53.1 bits (128), Expect = 3e-10
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 4 SKGQAALNAATRSLSIDL----KGDKIIATAMHPGWVKTDMGGSNAPL--EVGAATA 54
+K + +R + L KGDKI+ A PGWV+TDM G A E GA T
Sbjct: 196 TK--IGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETP 250
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 35.2 bits (82), Expect = 6e-04
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 4 SKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSL 63
SKG A+ T+SL++DL +I + PG V TD+ + + +
Sbjct: 143 SKG--AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE 200
Query: 64 GEAH 67
+
Sbjct: 201 EKEF 204
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 34.9 bits (81), Expect = 9e-04
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 67
AA + + +L+ + ++ PG V+T++ + E + QF + A
Sbjct: 166 AACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAE 225
Query: 68 NGGFFEYTGKAI 79
E +GK +
Sbjct: 226 TT---ELSGKCV 234
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 34.8 bits (81), Expect = 9e-04
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AL SL +L I T + PGWV TDM
Sbjct: 163 FALLGLAESLYRELAPLGIRVTTLCPGWVNTDM 195
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 35.1 bits (81), Expect = 0.001
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 1 MTSSKGQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGS 43
++ N + SL L +I + + PG VK+ + S
Sbjct: 156 FLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS 205
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 34.9 bits (81), Expect = 0.001
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 56
A+++ R S D KI A+ PG TDM + + T+
Sbjct: 172 GAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYT 220
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 34.6 bits (80), Expect = 0.001
Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 1 MTSSKGQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
+ + G A +L+ ++K + I + + P V+T +
Sbjct: 172 LVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL 218
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 34.5 bits (80), Expect = 0.001
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
A + A T LS +L+G I A+ PG TD+ EV A +
Sbjct: 180 AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLA 229
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 34.5 bits (80), Expect = 0.001
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAG 55
AA+ R+ ++D + + PG VKTDM N+ G
Sbjct: 175 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG 222
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 34.1 bits (79), Expect = 0.002
Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 4 SKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN 44
+K AL A + +L + + + V T +
Sbjct: 137 AK--GALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPL 175
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 33.7 bits (78), Expect = 0.002
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A+ R ++ID+ KI + PG +KTDM
Sbjct: 183 GAIETFARCMAIDMADKKITVNVVAPGGIKTDM 215
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 33.7 bits (78), Expect = 0.002
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 48
AAL + L+ +L I ++ PG++ T G E
Sbjct: 157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITE 197
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 33.4 bits (77), Expect = 0.003
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 67
AAL+ TR +IDL + ++ PG V T G+ E A+ + FI S E
Sbjct: 185 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE--TASDKLYSFIGSRKECI 242
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 32.9 bits (76), Expect = 0.004
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 61
+SK AL TRS++ID KI A+ PG + T M A +EVG + + I+
Sbjct: 154 VTSKH--ALLGLTRSVAIDY-APKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIE 210
Query: 62 SLGEAH 67
G H
Sbjct: 211 EWGRQH 216
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 32.9 bits (76), Expect = 0.005
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AAL + R+ +DLK I + PG +T
Sbjct: 178 AALRSFARNWILDLKDRGIRINTLSPGPTETTG 210
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 32.5 bits (75), Expect = 0.007
Identities = 5/45 (11%), Positives = 17/45 (37%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 52
+ SL +LK + ++P ++++ + ++
Sbjct: 153 WGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGF 197
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 32.1 bits (74), Expect = 0.008
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAP 46
AAL T+ L+ DL I +HPG TDM ++
Sbjct: 185 AALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD 223
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 32.1 bits (74), Expect = 0.008
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 58
+A + T+S+++D + A+ P + T + A LEVG+ I +
Sbjct: 142 NASAYVTSKHAVIGLTKSIALDY-APLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEK 200
Query: 59 FIQSLGEAH 67
I G H
Sbjct: 201 KISEWGHEH 209
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 32.2 bits (74), Expect = 0.008
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 4 SKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+K AA++ TR+ +IDL I ++ PG V T
Sbjct: 165 AK--AAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 32.2 bits (74), Expect = 0.009
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
T++K A+ T+S S+D + I + G T M
Sbjct: 178 TATK--HAITGLTKSTSLDGRVHDIACGQIDIGNADTPM 214
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 32.1 bits (74), Expect = 0.010
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++KG A+ A T++L++D + + PG + T +
Sbjct: 155 VATKG--AVTAMTKALALDESPYGVRVNCISPGNIWTPL 191
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 32.2 bits (74), Expect = 0.010
Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 58
G AA R + L G I ++HP V+T M + E A A
Sbjct: 171 GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATD 230
Query: 59 FIQSLGEAHNGGFFE 73
++G A
Sbjct: 231 TPGAMGNAMPVEVLA 245
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 31.7 bits (73), Expect = 0.010
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGG 42
A+N T +L+ L I A+ PG+VKTDM
Sbjct: 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNA 200
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 31.7 bits (73), Expect = 0.011
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++SKG A+N T+SL+ + D I ++ PG + T +
Sbjct: 172 SASKG--AINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 31.4 bits (72), Expect = 0.013
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 4 SKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+K AAL+ TRS +IDL I ++ PG V+T
Sbjct: 165 AK--AALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 31.4 bits (72), Expect = 0.015
Identities = 6/33 (18%), Positives = 12/33 (36%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++ + + + T + PG V T M
Sbjct: 163 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 31.3 bits (72), Expect = 0.016
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
AA NA+ TRSL++DL +I A+ PG + T+
Sbjct: 145 ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA 186
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 31.1 bits (71), Expect = 0.018
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
SSK AALN +L+ + + + A A+ PG V TDM
Sbjct: 152 SSK--AALNHFAMTLANEERQ--VKAIAVAPGIVDTDM 185
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 31.0 bits (71), Expect = 0.021
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+SKG A+++ TR++++D + I A+ PG + +
Sbjct: 174 VASKG--AISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY 210
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 31.0 bits (71), Expect = 0.021
Identities = 12/50 (24%), Positives = 18/50 (36%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
A + TR+ S +L +I A+ PG + T E A
Sbjct: 166 APVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQA 215
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 31.0 bits (71), Expect = 0.024
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
+K A+ TR ++ + A+ PG V+T P + A
Sbjct: 160 ACTKA--AIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHH 213
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 30.9 bits (71), Expect = 0.024
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++KG A++ TR L+ + D I + PG + T +
Sbjct: 160 GATKG--AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 30.9 bits (71), Expect = 0.025
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
SSK AA + R+++ DL I + PG + TD S E+
Sbjct: 161 SSK--AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT 213
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 31.0 bits (71), Expect = 0.025
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 60
+SK A L ++L+++L I A+ PG T +N P +
Sbjct: 160 AASK--AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH 216
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 30.6 bits (70), Expect = 0.026
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AL + + + I + + PG T M
Sbjct: 151 HALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 30.7 bits (70), Expect = 0.031
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
T++K A+ T+S ++D + I + G TDM
Sbjct: 187 TATK--HAITGLTKSTALDGRMHDIACGQIDIGNAATDM 223
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 30.6 bits (70), Expect = 0.031
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AAL +++L+ ++ D I ++PG + T
Sbjct: 162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 30.6 bits (70), Expect = 0.033
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 60
++KG + + T++L+I+L KI A++P +T + + + I
Sbjct: 161 NATKG--WVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI 217
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 30.6 bits (70), Expect = 0.033
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AA A S + L D I+ A+ P +
Sbjct: 152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 30.5 bits (70), Expect = 0.034
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+S+KG A+ T++++++L KI +++P V TDM
Sbjct: 150 SSTKG--AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 30.2 bits (69), Expect = 0.041
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
A+ TR L+ ++ G KI A+ PG + T + EV AG
Sbjct: 163 GAVMTFTRGLAKEV-GPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGAT 211
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 30.1 bits (69), Expect = 0.042
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMG 41
S+KG AL+ T+ ++++L KI A++P V T MG
Sbjct: 150 CSTKG--ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG 187
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 30.2 bits (69), Expect = 0.044
Identities = 10/60 (16%), Positives = 23/60 (38%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAH 67
+AL A +++L+ +L I ++ PG++ S + G + +
Sbjct: 165 SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS 224
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 30.2 bits (69), Expect = 0.045
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+++K A+ T+S++ D I + PG V T
Sbjct: 148 STTKA--AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 29.8 bits (68), Expect = 0.049
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++K A+ T++ + +L A PG V T M
Sbjct: 156 TTK--FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 29.9 bits (68), Expect = 0.050
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
LN S + +L+ ++ + + PG V+T+
Sbjct: 184 WGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 29.8 bits (68), Expect = 0.054
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 7/62 (11%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 58
A A TRS++ I A A+ PG VKT++G ++
Sbjct: 153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKL 212
Query: 59 FI 60
Sbjct: 213 MS 214
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 29.8 bits (68), Expect = 0.057
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AAL + T+ + +D I A+ P V T M
Sbjct: 171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 29.8 bits (68), Expect = 0.058
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++K AA+ + T+S +DL +I A+ PG V +
Sbjct: 157 ATK--AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 29.8 bits (68), Expect = 0.059
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 2 TSSKGQAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQF 59
++SK A++A TR+ ++ +G I ++HP + T M ++ P V
Sbjct: 152 SASKA--AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK 209
Query: 60 IQSLG 64
+ G
Sbjct: 210 LNRAG 214
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 29.4 bits (67), Expect = 0.066
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
AA++ T L+ ++ + I A+ PG ++TD+ S + A +
Sbjct: 186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV 235
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 29.4 bits (67), Expect = 0.068
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 61
SK + +R + +L+ I + + P +V T M + + GA AG + +
Sbjct: 176 GMSKA--GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI 233
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 29.5 bits (67), Expect = 0.068
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 48
G A + A T L+ L I A +HP V TDM S
Sbjct: 174 GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYR 223
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 29.4 bits (67), Expect = 0.070
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 61
T++K A+ T SL +L I + P V + + ++ Q
Sbjct: 168 TATKH--AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN 225
Query: 62 SLG 64
G
Sbjct: 226 LKG 228
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 29.4 bits (67), Expect = 0.074
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
T+SKG A+ T+S+++D G I A+ PG ++T M
Sbjct: 156 TTSKG--AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 29.4 bits (67), Expect = 0.074
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 4 SKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
SK AL T++L+++L I + PG +KT+
Sbjct: 167 SK--TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 29.6 bits (67), Expect = 0.080
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 61
SK AL A R + + + PG +T + A L+ I +F+
Sbjct: 156 AGSK--NALTVAVRKRAAAWGEAGVRLNTIAPGATETPL--LQAGLQDPRYGESIAKFVP 211
Query: 62 SLG 64
+G
Sbjct: 212 PMG 214
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 29.4 bits (67), Expect = 0.084
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 43
L + +DL+ + + PG V T G+
Sbjct: 155 FGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN 190
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 29.5 bits (67), Expect = 0.086
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
T++K AA A + L+++L I A+ PG ++T++
Sbjct: 181 TATK--AAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 29.4 bits (67), Expect = 0.087
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
ALN R+L+ + D I A A+ P + T +
Sbjct: 169 GALNQLARNLACEWASDGIRANAVAPAVIATPL 201
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 29.4 bits (67), Expect = 0.092
Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 7/58 (12%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGI 56
++ A+ ++ +++L D+I ++HPG T M +
Sbjct: 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNT 204
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 29.2 bits (66), Expect = 0.093
Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+ K AA + + L+ + ++++ A PG + DM
Sbjct: 171 AGK--AARDMLYQVLAAEEPSVRVLSYA--PGPLDNDM 204
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 29.2 bits (66), Expect = 0.099
Identities = 6/35 (17%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 8 AALNAATRSLSIDLKG--DKIIATAMHPGWVKTDM 40
AA + + L+ + G + + P + T
Sbjct: 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT 197
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 29.0 bits (66), Expect = 0.10
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
AA+N TR+++ D+ I A+ PG +KTD + E+ A
Sbjct: 165 AAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT 214
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 29.0 bits (66), Expect = 0.10
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 58
QAA NA+ RSL+ + I A A+ P +++T + + +E I
Sbjct: 161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL--TRFGMEKPELYDAWIA 218
Query: 59 FI 60
Sbjct: 219 GT 220
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 29.1 bits (66), Expect = 0.11
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 52
G +A+ T +L+I+L I ++HP V+T M A +E+ A
Sbjct: 174 GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFAR 227
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 29.1 bits (66), Expect = 0.11
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 52
++K + R+ ++L I ++HP VKT M + ++
Sbjct: 179 VAAK--HGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP 227
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 28.8 bits (65), Expect = 0.12
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AA+ + T SL+ + A +++PG +T +
Sbjct: 156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 28.8 bits (65), Expect = 0.12
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 4/39 (10%)
Query: 4 SKGQAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDM 40
SK AL+ S+ + + T G + T+
Sbjct: 180 SK--FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET 216
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 29.0 bits (66), Expect = 0.12
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
+N T+ LS +L G I A+ PG + T+ + P E+ +
Sbjct: 163 VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL 212
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 28.7 bits (65), Expect = 0.12
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 43
T++K A+ R ++ +L + + PG + TD+ G
Sbjct: 156 TATK--HAVVGLVRQMAFEL-APHVRVNGVAPGGMNTDLRGP 194
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 28.8 bits (65), Expect = 0.13
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Query: 2 TSSKGQAALNAATRSLSIDLKG---DKIIATAMHPGWVKTDM 40
SSK A ++L+ +L + T + P +V T
Sbjct: 181 CSSK--FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 28.7 bits (65), Expect = 0.13
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A+ S+ ++LKG + A++PG + T+
Sbjct: 148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEF 180
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 28.7 bits (65), Expect = 0.14
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 22 KGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 60
G + A A HPG+ T++ G++ A + + +
Sbjct: 186 AGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVV 224
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 28.8 bits (65), Expect = 0.14
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 8 AALNAATRSLSIDLKG--DKIIATAMHPGWVKTDM 40
A++ +SL+ G A A+ P + T M
Sbjct: 152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM 186
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 28.8 bits (65), Expect = 0.15
Identities = 5/47 (10%), Positives = 13/47 (27%), Gaps = 2/47 (4%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 48
+K + ++ +L+ I + + P N
Sbjct: 167 MMAK--YGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG 211
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 28.7 bits (65), Expect = 0.16
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 52
A+ R+ + +L I ++HPG V T MG + VG A
Sbjct: 170 FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQA 223
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 28.3 bits (64), Expect = 0.18
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
++K A+ +R L+ + I + PG + T +
Sbjct: 200 AATKA--AILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 28.3 bits (64), Expect = 0.18
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
SSK A+ T++ + DL I PG VKT M
Sbjct: 154 SSK--FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM 189
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 28.3 bits (64), Expect = 0.20
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
SK AAL+ +R L+ +L G+ I + PG + M
Sbjct: 183 GPSK--AALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 28.2 bits (64), Expect = 0.21
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 58
+ TR+L+ DL D I A+ P V+T ++A + ++Q
Sbjct: 150 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQ 209
Query: 59 FIQSLGEA 66
I L
Sbjct: 210 AIPRLQVP 217
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 28.3 bits (64), Expect = 0.23
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
LNA TRSL+++ + A+ PG +KT M
Sbjct: 175 GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM 207
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 28.2 bits (64), Expect = 0.23
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
T++K A+ T+S +++L I ++HPG VKT M
Sbjct: 154 TATKF--AVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 28.3 bits (64), Expect = 0.23
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+SK A L AT+ L+ +L I A ++ P V T+M
Sbjct: 172 CTSK--AGLVMATKVLARELGPHGIRANSVCPTVVLTEM 208
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 28.0 bits (63), Expect = 0.25
Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 4 SKGQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
S ++A AA T+++++++ + ++ PG+V T +
Sbjct: 170 SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 27.9 bits (63), Expect = 0.25
Identities = 7/39 (17%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+K +A++ + + +L + ++ PG ++TD+
Sbjct: 165 GVTK--SAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 27.9 bits (63), Expect = 0.28
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+ +RSL+ G + + PG T+
Sbjct: 162 TMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG 194
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 27.9 bits (63), Expect = 0.30
Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
A +AA RS++ + + + G V++
Sbjct: 155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ 196
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 27.6 bits (62), Expect = 0.34
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
A+ R+++++L I + P V T M
Sbjct: 187 NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 27.5 bits (62), Expect = 0.34
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+SK + T +L+++ I + PG + T +
Sbjct: 159 AASK--GGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 27.6 bits (62), Expect = 0.35
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTD 39
A+ A T SL +L KI + PG V+T+
Sbjct: 193 FAVGAFTDSLRKELINTKIRVILIAPGLVETE 224
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 27.5 bits (62), Expect = 0.36
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
AA + T + ++DL I A+ PG++
Sbjct: 153 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF 194
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 27.5 bits (62), Expect = 0.36
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
QA+ ++ T+ + DL G I A+ PG ++T M
Sbjct: 167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 27.5 bits (62), Expect = 0.38
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AAL A TR L+++L +II A+ G + TD
Sbjct: 159 AALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 27.2 bits (61), Expect = 0.42
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTD 39
A + + +L DL+G + T + PG +++
Sbjct: 176 AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESE 207
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 27.2 bits (61), Expect = 0.44
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A+ R +D G + + PG V+T +
Sbjct: 158 YAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 27.2 bits (61), Expect = 0.47
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAA 52
GQ+ A+ SL+ ++ I +++PG V T+M + L++
Sbjct: 204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLP 257
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 27.1 bits (61), Expect = 0.49
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+ R+L+++L + A+ P + TD
Sbjct: 162 LPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 27.2 bits (61), Expect = 0.50
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A L A ++ L++ L I + PG +++DM
Sbjct: 189 AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 27.1 bits (61), Expect = 0.50
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 47
+SK A+ TR+L+ + G + A+ PG+V T A L
Sbjct: 179 AASKH--AVVGLTRALASEWAGRGVGVNALAPGYVVTAN---TAAL 219
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 27.1 bits (61), Expect = 0.50
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 2 TSSKGQAALNAATRSLSIDL--KGDKIIATAMHPGWVKTDM 40
+SKG A+ ++S ++D K + +HPG++KT +
Sbjct: 156 NASKG--AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 27.2 bits (61), Expect = 0.53
Identities = 6/42 (14%), Positives = 13/42 (30%), Gaps = 3/42 (7%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 43
++K A L + T S + + + P +
Sbjct: 171 CATK--AGLESLTLSFAARF-APLVKVNGIAPALLMFQPKDD 209
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 27.2 bits (61), Expect = 0.55
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFI 60
A + T+SL+++ I + PG + + N + G Q I
Sbjct: 176 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI 228
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 27.1 bits (61), Expect = 0.56
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
Q+ AA TR+ +++ I A+ PG + T M
Sbjct: 161 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 202
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 27.1 bits (61), Expect = 0.56
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 4 SKGQAALNAATRSLSIDLKGDKII-ATAMHPGWVKTDMGGSNAPLE 48
SK A ++L+ +L+G + A +++PG +T M P E
Sbjct: 170 SK--FATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE 213
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 27.1 bits (61), Expect = 0.57
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 43
+NA + +L ++ + + PG T++ G
Sbjct: 160 FGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH 195
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 26.7 bits (60), Expect = 0.67
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 47
T++KG + T S++ + I A+ PG++ TDM N L
Sbjct: 160 TAAKG--GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM---NTAL 200
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 26.8 bits (60), Expect = 0.68
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A+ A +S +I++ I + P ++
Sbjct: 133 GAVTAFAKSAAIEM-PRGIRINTVSPNVLEESW 164
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 26.5 bits (59), Expect = 0.73
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 8 AALNAATRSLSIDLKG--DKIIATAMHPGWVKTDM 40
AA++ T SL+ G D + P + T M
Sbjct: 148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 26.9 bits (59), Expect = 0.74
Identities = 15/70 (21%), Positives = 18/70 (25%), Gaps = 29/70 (41%)
Query: 7 QAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGE- 65
Q AL ++ DLK S + A AG SLGE
Sbjct: 1733 QPALTLMEKAAFEDLK--------------------SKGLIPADATFAG-----HSLGEY 1767
Query: 66 ---AHNGGFF 72
A
Sbjct: 1768 AALASLADVM 1777
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 26.8 bits (60), Expect = 0.76
Identities = 6/36 (16%), Positives = 17/36 (47%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGS 43
A++A + ++ ++ + + P VKT++
Sbjct: 164 FAVHAISENVREEVAASNVRVMTIAPSAVKTELLSH 199
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 26.7 bits (60), Expect = 0.79
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 4 SKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 48
SK A + L+ + ++ ++PG +T M S P E
Sbjct: 168 SK--FATEGMMQVLADEY-QQRLRVNCINPGGTRTAMRASAFPTE 209
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 26.4 bits (59), Expect = 0.86
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGW-VKTDM 40
T +K ++ T L+ + + A+ P + TD
Sbjct: 165 TLAK--MGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA 202
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 26.4 bits (59), Expect = 0.95
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 4 SKGQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
S ++A AA T+ +++ G I A A+ PGWV+T +
Sbjct: 149 SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 26.4 bits (59), Expect = 1.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A+ T++L+ ++ I + PG+VKT M
Sbjct: 164 FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 26.4 bits (59), Expect = 1.0
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
A+L A + L++DL D I A+ G ++T APL
Sbjct: 191 ASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQV 250
Query: 48 EVGAATA 54
EVG A
Sbjct: 251 EVGKTAA 257
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 26.3 bits (59), Expect = 1.0
Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 7/59 (11%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
Q+ AA TR +I+ + A+ P + + E+ A
Sbjct: 170 SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDE 228
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 26.4 bits (59), Expect = 1.0
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
A+L+A+ + L+ DL + I ++ G ++T APL
Sbjct: 166 ASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPE 225
Query: 48 EVGAATA 54
EVG A
Sbjct: 226 EVGDTAA 232
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 26.4 bits (59), Expect = 1.1
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 9/44 (20%)
Query: 6 GQAALNAA-------TRS--LSIDLKGDKIIATAMHPGWVKTDM 40
Q A+ TRS L+ +L + A+ PG+V T +
Sbjct: 149 QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI 192
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A*
1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A*
1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 26.4 bits (59), Expect = 1.1
Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
A+L A R ++ + + + A+ G ++T + P+
Sbjct: 167 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE 226
Query: 48 EVGAATA 54
+VG + A
Sbjct: 227 DVGNSAA 233
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid
biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 26.0 bits (58), Expect = 1.1
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
AAL A+ R L+ +L + A+ G V+T D APL
Sbjct: 165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE 224
Query: 48 EVGAATA 54
EVG
Sbjct: 225 EVGNLGL 231
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A {Burkholderia
pseudomallei 1710B}
Length = 271
Score = 26.0 bits (58), Expect = 1.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
AAL A+ R L++ L + A+ G +KT D SN+PL
Sbjct: 172 AALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIE 231
Query: 48 EVGAATA 54
+VG A A
Sbjct: 232 QVGNAGA 238
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 26.0 bits (58), Expect = 1.1
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 4 SKGQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
S G+AA AA T+ + ++ + A+ PGWV T +
Sbjct: 145 STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL 188
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 26.0 bits (58), Expect = 1.1
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
AAL +A R L++DL I A+ G ++T NAPL
Sbjct: 163 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE 222
Query: 48 EVGAATA 54
EVG A
Sbjct: 223 EVGNAGM 229
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 26.0 bits (58), Expect = 1.2
Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
AAL + R L+ D+ A+ G VKT + P
Sbjct: 179 AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE 238
Query: 48 EVGAATA 54
+VG
Sbjct: 239 DVGDTAV 245
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 25.9 bits (58), Expect = 1.3
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 8/47 (17%)
Query: 1 MTSSKGQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
S A +A T +L++ L G ++ + PGW+
Sbjct: 137 FQSEPDSEAYASAKGGIVALTHALAMSL-GPDVLVNCIAPGWINVTE 182
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 26.0 bits (58), Expect = 1.3
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
G A A R+L+++L + + PG ++T M
Sbjct: 145 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 26.1 bits (58), Expect = 1.4
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
AAL A+ + L++DL I A+ G +KT NAPL
Sbjct: 188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID 247
Query: 48 EVGAATA 54
EVG
Sbjct: 248 EVGDVGL 254
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 26.1 bits (58), Expect = 1.4
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
AAL A+ + L++DL +I A+ G V+T N+PL
Sbjct: 187 AALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD 246
Query: 48 EVGAATA 54
+VG A
Sbjct: 247 DVGGAAL 253
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 26.0 bits (58), Expect = 1.4
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
A L+ ++ D + + PG V T
Sbjct: 169 AFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 26.0 bits (58), Expect = 1.5
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTD 39
A + + +L DL G + T + PG V
Sbjct: 152 AFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 25.7 bits (57), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 8 AALNAATRSLSIDL--KGDKIIATAMHPGWVKTDM 40
A+ A T L +L I AT + PG V+T
Sbjct: 192 YAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 25.9 bits (58), Expect = 1.6
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
T++K AL TR+L+ + I + PG+V+T+
Sbjct: 145 TTAK--TALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 25.6 bits (57), Expect = 1.6
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 20/67 (29%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKT-------------DMGGSNAPL------- 47
A+L A R ++ L D I A+ G +KT D +PL
Sbjct: 184 ASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIM 243
Query: 48 EVGAATA 54
EVG A
Sbjct: 244 EVGNTVA 250
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 25.5 bits (57), Expect = 1.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+SK A++ TR+L+ + G + A+ PG+V T+M
Sbjct: 160 MASK--GAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 25.7 bits (57), Expect = 1.8
Identities = 9/50 (18%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Query: 8 AALNAATRSLSIDLKGDKI-IATAMHPGWVKTDMGGSNAPLEVGAATAGI 56
L A +S++ +L I +A + V T G
Sbjct: 160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALAN 209
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 25.6 bits (57), Expect = 1.9
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
Q N++ + L+ + I A+ PG+V TD
Sbjct: 168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 25.3 bits (56), Expect = 2.1
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 3 SSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNA 45
++K AAL + L+ ++ I + PG +T++ G A
Sbjct: 153 ATK--AALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGA 193
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 25.3 bits (56), Expect = 2.2
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQ 58
GQ A AA T + + DL I + PG +KT + S E A A I
Sbjct: 183 GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIP 241
Query: 59 FIQSLGEA 66
F + LG
Sbjct: 242 FPKRLGTP 249
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 25.2 bits (56), Expect = 2.3
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 8/42 (19%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
Q + N A RSL+ + D ++ PG++ T +
Sbjct: 171 EQTSYNVAKAGCIHMARSLANEW-RDFARVNSISPGYIDTGL 211
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 24.8 bits (55), Expect = 3.3
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPL 47
+SKG + + T++L+ + I + PGW +T M +
Sbjct: 173 AASKG--GVASLTKALAKEWGRYGIRVNVIAPGWYRTKM---TEAV 213
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 24.9 bits (55), Expect = 3.6
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLE 48
AL TR+ +++L I A+ PG E
Sbjct: 187 HALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 227
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 24.9 bits (55), Expect = 3.8
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSN 44
A + A ++SL+ + + + PG +KT S
Sbjct: 182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR 218
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 24.5 bits (54), Expect = 4.0
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 61
++KG L T++++ + I + PG++ T APL F Q
Sbjct: 184 AAAKG--GLKMLTKNIASEYGEANIQCNGIGPGYIATPQ---TAPLRELQKDGSRHPFDQ 238
Query: 62 SL 63
+
Sbjct: 239 FI 240
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 24.5 bits (54), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
AA R+ +I+L KI A+ PG + T+
Sbjct: 166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 24.4 bits (54), Expect = 4.4
Identities = 10/39 (25%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+SK AA+ T++++++L +I ++ PG+++T++
Sbjct: 185 CTSK--AAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 24.4 bits (54), Expect = 4.8
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 8/41 (19%)
Query: 7 QAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
QA N A +SL+I+ + PG++ TD+
Sbjct: 184 QAPYNTAKAACTHLAKSLAIEW-APFARVNTISPGYIDTDI 223
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 24.4 bits (54), Expect = 5.0
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
G +A A+ S+ ++L G + + PG TDM
Sbjct: 142 GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183
>3j0c_A E1 envelope glycoprotein; alphavirus, bioweapon; 4.80A {Venezuelan
equine encephalitis virus}
Length = 442
Score = 24.6 bits (53), Expect = 5.2
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 26 IIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQSLGEAHN 68
+ TA W+ + +GGS + +G A I+ + HN
Sbjct: 402 VSKTAW--TWLTSLLGGSAVIIIIGLVLATIVAMYVLTNQKHN 442
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 24.0 bits (53), Expect = 5.4
Identities = 11/50 (22%), Positives = 18/50 (36%)
Query: 8 AALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGII 57
AL ++LS ++ I + PGW +T+ E I
Sbjct: 158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI 207
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 24.0 bits (53), Expect = 5.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDM 40
+++KG A+ A TRSLS L I + PG + T +
Sbjct: 197 SATKG--AIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain
acyl-COA synthetase, xenobiotic/medium-chain FA COA
ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A
3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Length = 570
Score = 24.1 bits (53), Expect = 6.2
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 19 IDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAAT 53
L+ I+ T GW+ + P +GA T
Sbjct: 242 TGLQASDIMWTISDTGWILNILCSLMEPWALGACT 276
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 23.7 bits (52), Expect = 7.7
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 6 GQAALNAA-------TRSLSIDLKGDKIIATAMHPGWVKTDM 40
A A+ T+S+ +L I A+ PG+V+T M
Sbjct: 171 YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM 212
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 23.7 bits (52), Expect = 8.6
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 2 TSSKGQAALNAATRSLSIDLKGDKIIATAMHPGWVKTDMGGSNAPLEVGAATAGIIQFIQ 61
+SKG + A T + +L G I + PG T + P + A+ A + F
Sbjct: 149 AASKG--GVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPFPP 205
Query: 62 SLGEA 66
LG
Sbjct: 206 RLGRP 210
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.130 0.384
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,166,877
Number of extensions: 57205
Number of successful extensions: 286
Number of sequences better than 10.0: 1
Number of HSP's gapped: 278
Number of HSP's successfully gapped: 188
Length of query: 81
Length of database: 6,701,793
Length adjustment: 50
Effective length of query: 31
Effective length of database: 5,305,743
Effective search space: 164478033
Effective search space used: 164478033
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.2 bits)