BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11194
(316 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 165/263 (62%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VAIKI+ K Q P L+K RE+ ++K L HPN
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y+IMEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ + +TFCGS YA+PE+ QG
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLDTFCGSPPYAAPELFQGK 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 243
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
+L+P++ R L+ I +DRW+
Sbjct: 244 RFLVLNPIK-RGTLEQIMKDRWI 265
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 14/296 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA+KI+ K Q L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L +TFCGS YA+PE+ QG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKL-DTFCGSPPYAAPELFQGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 263 N--ILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKAEAELDHYIDMIQTSASSTDGY 316
IL+P + R L+ I +DRW+ + + A L Y D +T + GY
Sbjct: 246 KFLILNPSK-RGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKDPRRTELMVSMGY 300
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 165/263 (62%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA+KI+ K Q L+K RE+ ++K L HPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 67
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G++ E AR F Q++ A+QYCH++ +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L +TFCGS YA+PE+ QG
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKL-DTFCGSPPYAAPELFQGK 180
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 238
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
IL+P + R L+ I +DRW+
Sbjct: 239 KFLILNPSK-RGTLEQIMKDRWM 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 164/263 (62%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VAIKI+ K Q P L+K RE+ ++K L HPN
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPN 75
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y+IMEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ + + FCG+ YA+PE+ QG
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLDAFCGAPPYAAPELFQGK 188
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 246
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
+L+P++ R L+ I +DRW+
Sbjct: 247 RFLVLNPIK-RGTLEQIMKDRWI 268
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 164/263 (62%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA+KI+ K Q L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L +TFCGS YA+PE+ QG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKL-DTFCGSPPYAAPELFQGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
IL+P + R L+ I +DRW+
Sbjct: 246 KFLILNPSK-RGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 207 bits (526), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 164/263 (62%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA++I+ K Q L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L +TFCGS YA+PE+ QG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKL-DTFCGSPPYAAPELFQGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
IL+P + R L+ I +DRW+
Sbjct: 246 KFLILNPSK-RGTLEQIMKDRWM 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 163/263 (61%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA++I+ K Q L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L E FCGS YA+PE+ QG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKLDE-FCGSPPYAAPELFQGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
IL+P + R L+ I +DRW+
Sbjct: 246 KFLILNPSK-RGTLEQIMKDRWM 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 164/282 (58%), Gaps = 17/282 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA+KI+ K Q P L+K RE+ ++K L HPN
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPN 75
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD D NIK++DFGF+ N L +TFCGS YA+PE+ QG
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEF------TVGNKL-DTFCGSPPYAAPELFQGK 188
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P E
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKL 248
Query: 263 NILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKAEAELDHYID 304
+L+P++ R L+ I +DRW+ V E EL Y +
Sbjct: 249 LVLNPIK-RGSLEQIMKDRWM-------NVGHEEEELKPYTE 282
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 163/263 (61%), Gaps = 14/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA+KI+ K Q L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++MEYA G +FD + G + E AR F Q++ A+QYCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L + FCG+ YA+PE+ QG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF------TFGNKL-DAFCGAPPYAAPELFQGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P +ST+C+ L+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 263 N--ILSPVQTRPRLKTIAEDRWL 283
IL+P + R L+ I +DRW+
Sbjct: 246 KFLILNPSK-RGTLEQIMKDRWM 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 168/296 (56%), Gaps = 14/296 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K IG G++A VKLAR +VA+KI+ K Q L+K RE+ + K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + IET +Y++ EYA G +FD + G E AR F Q++ A+QYCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD+D NIK++DFGF+ N L + FCG+ YA+PE+ QG
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEF------TFGNKL-DAFCGAPPYAAPELFQGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
Y D+WS+GV+L+ +V G LPFD ++ EL ++V + K P ST+C+ L+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY--XSTDCENLLK 245
Query: 263 N--ILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKAEAELDHYIDMIQTSASSTDGY 316
IL+P + R L+ I +DRW + + L Y D +T + GY
Sbjct: 246 KFLILNPSK-RGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKDPRRTELXVSXGY 300
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 152/264 (57%), Gaps = 14/264 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K +G GS+ VKLA T VA+KI++K ++ + REI ++ L+HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ I++ + +++EYA N LFD I + + E ARR+F Q++ A++YCH +
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD N+K++DFG + D + +T CGS YA+PE++ G
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNI-------MTDGNFLKTSCGSPNYAAPEVISGK 187
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-TFPK--QPEVSTECKEL 260
YA D+WS GV+L+ M+ RLPFDD S+ L K + N V T PK P + K +
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 247
Query: 261 ISNILSPVQTRPRLKTIAEDRWLK 284
+ I++P+ R + I +D W K
Sbjct: 248 L--IVNPL-NRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 152/264 (57%), Gaps = 14/264 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K +G GS+ VKLA T VA+KI++K ++ + REI ++ L+HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ I++ + +++EYA N LFD I + + E ARR+F Q++ A++YCH +
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD N+K++DFG + D + +T CGS YA+PE++ G
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNI-------MTDGNFLKTSCGSPNYAAPEVISGK 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-TFPK--QPEVSTECKEL 260
YA D+WS GV+L+ M+ RLPFDD S+ L K + N V T PK P + K +
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 246
Query: 261 ISNILSPVQTRPRLKTIAEDRWLK 284
+ I++P+ R + I +D W K
Sbjct: 247 L--IVNPL-NRISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 152/265 (57%), Gaps = 14/265 (5%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + K +G GS+ VKLA T VA+KI++K ++ + REI ++ L+HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
++I+ I++ + +++EYA N LFD I + + E ARR+F Q++ A++YCH
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+VHRD+K ENLLLD N+K++DFG + D + +T CGS YA+PE++ G
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNI-------MTDGNFLKTSCGSPNYAAPEVISG 176
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-TFPK--QPEVSTECKE 259
YA D+WS GV+L+ M+ RLPFDD S+ L K + N V T PK P + K
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 236
Query: 260 LISNILSPVQTRPRLKTIAEDRWLK 284
++ I++P+ R + I +D W K
Sbjct: 237 ML--IVNPL-NRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 152/264 (57%), Gaps = 14/264 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + K +G GS+ VKLA T VA+KI++K ++ + REI ++ L+HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ I++ + +++EYA N LFD I + + E ARR+F Q++ A++YCH +
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD N+K++DFG + D + +T CGS YA+PE++ G
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNI-------MTDGNFLKTSCGSPNYAAPEVISGK 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-TFPK--QPEVSTECKEL 260
YA D+WS GV+L+ M+ RLPFDD S+ L K + N V T PK P + K +
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 241
Query: 261 ISNILSPVQTRPRLKTIAEDRWLK 284
+ I++P+ R + I +D W K
Sbjct: 242 L--IVNPL-NRISIHEIMQDDWFK 262
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 150/264 (56%), Gaps = 13/264 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y +G +G G++ VK+ VA+KI+++ + + + REI+ +K +HP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ Q I T +++MEY G LFD I G ++E+ ARR F Q+L A+ YCH V
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K EN+LLD+ N K++DFG + + +D T CGS YA+PE++ G
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS-------NMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE-VSTECKELIS 262
YA DIWS GV+L+A++ G LPFDD V L K+++ V + PE ++ L+
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY--IPEYLNRSVATLLM 243
Query: 263 NILS--PVQTRPRLKTIAEDRWLK 284
++L P++ R +K I E W K
Sbjct: 244 HMLQVDPLK-RATIKDIREHEWFK 266
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 147/264 (55%), Gaps = 13/264 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y +G +G G++ VK+ + VA+KI+++ + + + REI+ +K +HP+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ Q I T ++++MEY G LFD I G +DE +RR F Q+L + YCH V
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K EN+LLD+ N K++DFG + +D CGS YA+PE++ G
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNM-------MSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQ---PEVSTECKEL 260
YA DIWS GV+L+A++ G LPFDD V L K++ + + + Q P V + K +
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHM 250
Query: 261 ISNILSPVQTRPRLKTIAEDRWLK 284
+ + P++ R +K I E W K
Sbjct: 251 LQ--VDPMK-RATIKDIREHEWFK 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 149/264 (56%), Gaps = 13/264 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y +G +G G++ VK+ VA+KI+++ + + + REI+ +K +HP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ Q I T +++MEY G LFD I G ++E+ ARR F Q+L A+ YCH V
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K EN+LLD+ N K++DFG + + +D CGS YA+PE++ G
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS-------NMMSDGEFLRDSCGSPNYAAPEVISGR 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE-VSTECKELIS 262
YA DIWS GV+L+A++ G LPFDD V L K+++ V + PE ++ L+
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY--IPEYLNRSVATLLM 243
Query: 263 NILS--PVQTRPRLKTIAEDRWLK 284
++L P++ R +K I E W K
Sbjct: 244 HMLQVDPLK-RATIKDIREHEWFK 266
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 146/262 (55%), Gaps = 12/262 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + + +G GS+ VKLA + VA+K +S+ + + REI +K L+HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+I+ I T + +++EYA G LFD I + + E RR+F Q++ A++YCH +
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K ENLLLD + N+K++DFG + D + +T CGS YA+PE++ G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNI-------MTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
YA D+WS G+VL+ M+ GRLPFDD + L K+V N + +S + LI
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-NSCVYVMPDFLSPGAQSLIRR 241
Query: 264 IL--SPVQTRPRLKTIAEDRWL 283
++ P+Q R ++ I D W
Sbjct: 242 MIVADPMQ-RITIQEIRRDPWF 262
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 130/230 (56%), Gaps = 14/230 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPR---EIEVVKGLK 80
Y + + IGTG +A VKLA VAIKI+ K D LPR EIE +K L+
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD-----LPRIKTEIEALKNLR 66
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H ++ + +ET +++++++EY G LFD I Q + E R F Q++ A+ Y H
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
+G HRD+K ENLL D + +KL DFG + + +T CGS AYA+PE++
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLC-----AKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK 249
QG Y +D+WSMG++L+ ++ G LPFDD +V L K++ + K PK
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK 231
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 150/274 (54%), Gaps = 18/274 (6%)
Query: 14 RKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREI 73
RK T+ + + +G+ +G G + V LAR ++ +A+K++ K Q + ++ L REI
Sbjct: 10 RKFTIDD---FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 74 EVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE 133
E+ L+HPN++R R+Y+++E+A G L+ ++ G DE R+ + +L +
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 126
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
AL YCHER V+HRDIK ENLL+ +K++DFG+ S A + CG+
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLD 178
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPE 252
Y PE+++G + + D+W GV+ + + G PFD S E +++ N + FP P
Sbjct: 179 YLPPEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF 235
Query: 253 VSTECKELISNIL--SPVQTRPRLKTIAEDRWLK 284
+S K+LIS +L P Q P LK + E W+K
Sbjct: 236 LSDGSKDLISKLLRYHPPQRLP-LKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 150/274 (54%), Gaps = 18/274 (6%)
Query: 14 RKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREI 73
RK T+ + + +G+ +G G + V LAR ++ +A+K++ K Q + ++ L REI
Sbjct: 9 RKFTIDD---FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 74 EVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE 133
E+ L+HPN++R R+Y+++E+A G L+ ++ G DE R+ + +L +
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
AL YCHER V+HRDIK ENLL+ +K++DFG+ S A + CG+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLD 177
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPE 252
Y PE+++G + + D+W GV+ + + G PFD S E +++ N + FP P
Sbjct: 178 YLPPEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF 234
Query: 253 VSTECKELISNIL--SPVQTRPRLKTIAEDRWLK 284
+S K+LIS +L P Q P LK + E W+K
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLP-LKGVMEHPWVK 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G ++ ++ DE R + +L AL YCH + V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 243
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 244 RLLKHNPSQ-RPMLREVLEHPWI 265
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 148/263 (56%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S +T CG+ Y PE+++G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 183 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 239
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 240 RLLKHNPSQ-RPMLREVLEHPWI 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 156/283 (55%), Gaps = 17/283 (6%)
Query: 4 STVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD 63
++ Q ++ ++ LE + +G+ +G G + V LAR + +A+K++ K Q
Sbjct: 18 ASKQKNEESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 75
Query: 64 YLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR 123
++ L RE+E+ L+HPN++R RVY+I+EYA G+++ ++ DE R
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 135
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNS 183
+ +L AL YCH + V+HRDIK ENLLL S +K++DFG+ S A +S
Sbjct: 136 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSS 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
T CG+ Y PE+++G + + D+WS+GV+ + + G+ PF+ ++ E K++
Sbjct: 188 RRTTLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 244 -KVTFPKQPEVSTECKELISNIL--SPVQTRPRLKTIAEDRWL 283
+ TFP V+ ++LIS +L +P Q RP L+ + E W+
Sbjct: 247 VEFTFPDF--VTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 156/283 (55%), Gaps = 17/283 (6%)
Query: 4 STVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD 63
++ Q ++ ++ LE + +G+ +G G + V LAR + +A+K++ K Q
Sbjct: 9 ASKQKNEESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 66
Query: 64 YLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR 123
++ L RE+E+ L+HPN++R RVY+I+EYA G+++ ++ DE R
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 126
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNS 183
+ +L AL YCH + V+HRDIK ENLLL S +K++DFG+ S A +S
Sbjct: 127 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSS 178
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
T CG+ Y PE+++G + + D+WS+GV+ + + G+ PF+ ++ E K++
Sbjct: 179 RRTTLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
Query: 244 -KVTFPKQPEVSTECKELISNIL--SPVQTRPRLKTIAEDRWL 283
+ TFP V+ ++LIS +L +P Q RP L+ + E W+
Sbjct: 238 VEFTFPDF--VTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 277
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 241
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 242 RLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 243
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 244 RLLKHNPSQ-RPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 179 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 235
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 236 RLLKHNPSQ-RPMLREVLEHPWI 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 241
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 242 RLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 186 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 242
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 243 RLLKHNPSQ-RPMLREVLEHPWI 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 181 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 237
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 238 RLLKHNPSQ-RPMLREVLEHPWI 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T CG+ Y PE ++G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 187 XHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 243
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 244 RLLKHNPSQ-RPXLREVLEHPWI 265
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 156/283 (55%), Gaps = 17/283 (6%)
Query: 4 STVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD 63
++ Q ++ ++ LE + +G+ +G G + V LAR + +A+K++ K Q
Sbjct: 18 ASKQKNEESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 75
Query: 64 YLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR 123
++ L RE+E+ L+HPN++R RVY+I+EYA G+++ ++ DE R
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 135
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNS 183
+ +L AL YCH + V+HRDIK ENLLL S +K++DFG+ S A +S
Sbjct: 136 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSS 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
+ CG+ Y PE+++G + + D+WS+GV+ + + G+ PF+ ++ E K++
Sbjct: 188 RRDDLCGTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 244 -KVTFPKQPEVSTECKELISNIL--SPVQTRPRLKTIAEDRWL 283
+ TFP V+ ++LIS +L +P Q RP L+ + E W+
Sbjct: 247 VEFTFPDF--VTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 286
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 149/274 (54%), Gaps = 18/274 (6%)
Query: 14 RKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREI 73
RK T+ + + + + +G G + V LAR ++ +A+K++ K Q + ++ L REI
Sbjct: 9 RKFTIDD---FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 74 EVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE 133
E+ L+HPN++R R+Y+++E+A G L+ ++ G DE R+ + +L +
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
AL YCHER V+HRDIK ENLL+ +K++DFG+ S A + CG+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLD 177
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPE 252
Y PE+++G + + D+W GV+ + + G PFD S E +++ N + FP P
Sbjct: 178 YLPPEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF 234
Query: 253 VSTECKELISNIL--SPVQTRPRLKTIAEDRWLK 284
+S K+LIS +L P Q P LK + E W+K
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLP-LKGVMEHPWVK 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K+++FG+ S A +S T CG+ Y PE+++G
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 184 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 240
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 241 RLLKHNPSQ-RPMLREVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K+++FG+ S A +S T CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 241
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 242 RLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 241
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 242 RLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 184 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 240
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 241 RLLKHNPSQ-RPMLREVLEHPWI 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 147/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S + CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 241
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 242 RLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 243
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 244 RLLKHNPSQ-RPMLREVLEHPWI 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 185 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 241
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 242 RLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 183 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 239
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 240 RLLKHNPSQ-RPMLREVLEHPWI 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R + RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ + K++ + TFP V+ ++LIS
Sbjct: 182 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF--VTEGARDLIS 238
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 239 RLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 146/263 (55%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S T G+ Y PE+++G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGW--------SCHAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 183 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 239
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 240 RLLKHNPSQ-RPMLREVLEHPWI 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 144/263 (54%), Gaps = 15/263 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G ++ ++ DE R + +L AL YCH + V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S +K++DFG+ S A +S G+ Y PE+++G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G+ PF+ ++ E K++ + TFP V+ ++LIS
Sbjct: 187 MHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--VTEGARDLIS 243
Query: 263 NIL--SPVQTRPRLKTIAEDRWL 283
+L +P Q RP L+ + E W+
Sbjct: 244 RLLKHNPSQ-RPMLREVLEHPWI 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 143/263 (54%), Gaps = 13/263 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S+ +K++DFG+ S A +S +T CG+ Y PE+++G
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGW--------SVHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G PF+ + E +++ + TFP V+ ++LIS
Sbjct: 186 MHDEKV-DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF--VTEGARDLIS 242
Query: 263 NILS-PVQTRPRLKTIAEDRWLK 284
+L R L + E W+K
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 142/263 (53%), Gaps = 13/263 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ +G+ +G G + V LAR + +A+K++ K Q ++ L RE+E+ L+HPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++R RVY+I+EYA G+++ ++ DE R + +L AL YCH + V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK ENLLL S+ +K++DFG+ S A +S T CG+ Y PE+++G
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELIS 262
+ + D+WS+GV+ + + G PF+ + E +++ + TFP V+ ++LIS
Sbjct: 186 MHDEKV-DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF--VTEGARDLIS 242
Query: 263 NILS-PVQTRPRLKTIAEDRWLK 284
+L R L + E W+K
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 18/253 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+S Y + K IG+G++ +L R + + VA+K + + + + +K REI + L
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSL 71
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++RF + I T + I+MEYA G LF+ I G E AR +F QL+ + YCH
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 140 ERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN LLD +K+ DFG++++ + +S ++ G+ AY +P
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-------HSQPKSTVGTPAYIAP 184
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-----TFPKQPE 252
E+L Y ++D+WS GV L+ M+ G PF+D + ++ +++ P
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 244
Query: 253 VSTECKELISNIL 265
+S EC+ LIS I
Sbjct: 245 ISPECRHLISRIF 257
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 18/253 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+S Y + K IG+G++ +L R + + VA+K + + + + + REI + L
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK----IAANVKREIINHRSL 72
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++RF + I T + I+MEYA G LF+ I G E AR +F QL+ + YCH
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 140 ERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN LLD +K+ DFG++++ + +S ++ G+ AY +P
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-------HSQPKSTVGTPAYIAP 185
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-----TFPKQPE 252
E+L Y ++D+WS GV L+ M+ G PF+D + ++ +++ P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 253 VSTECKELISNIL 265
+S EC+ LIS I
Sbjct: 246 ISPECRHLISRIF 258
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 19/272 (6%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+S Y K IG+G++ +L R VA+K + + A + + + REI + L
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSL 73
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++RF + I T + IIMEYA G L++ I G E AR +F QLL + YCH
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 140 ERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ HRD+K EN LLD +K+ DFG++++ + +S ++ G+ AY +P
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-------HSQPKSTVGTPAYIAP 186
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQN----KVTFPKQPE 252
E+L Y ++D+WS GV L+ M+ G PF+D + K +Q K + P
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR 246
Query: 253 VSTECKELISNI-LSPVQTRPRLKTIAEDRWL 283
+S EC LIS I ++ TR + I W
Sbjct: 247 ISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 18/253 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+S Y + K IG G++ +L R + + VA+K + + + + +K REI + L
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK----REIINHRSL 72
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++RF + I T + I+MEYA G LF+ I G E AR +F QL+ + Y H
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 140 ERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN LLD +K++DFG+++A + +S ++ G+ AY +P
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL-------HSQPKSAVGTPAYIAP 185
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-----TFPKQPE 252
E+L Y ++D+WS GV L+ M+ G PF+D + ++ +++ P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 253 VSTECKELISNIL 265
+S EC+ LIS I
Sbjct: 246 ISPECRHLISRIF 258
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 18/253 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+S Y + K IG+G++ +L R + + VA+K + + + + +K REI + L
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSL 72
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++RF + I T + I+MEYA G LF+ I G E AR +F QL+ + YCH
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 140 ERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN LLD +K+ FG++++ + +S ++ G+ AY +P
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-------SVLHSQPKSTVGTPAYIAP 185
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-----TFPKQPE 252
E+L Y ++D+WS GV L+ M+ G PF+D + ++ +++ P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 253 VSTECKELISNIL 265
+S EC+ LIS I
Sbjct: 246 ISPECRHLISRIF 258
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 134/253 (52%), Gaps = 18/253 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+S Y + K IG+G++ +L R + + VA+K + + + + +K REI + L
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSL 72
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++RF + I T + I+MEYA G LF+ I G E AR +F QL+ + YCH
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 140 ERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN LLD +K+ FG++++ + +S + G+ AY +P
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL-------HSQPKDTVGTPAYIAP 185
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV-----TFPKQPE 252
E+L Y ++D+WS GV L+ M+ G PF+D + ++ +++ P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 253 VSTECKELISNIL 265
+S EC+ LIS I
Sbjct: 246 ISPECRHLISRIF 258
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 147/284 (51%), Gaps = 22/284 (7%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV 76
T + S Y +++G GS+ V L + + A+K++SK Q K+ L RE++++
Sbjct: 21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
K L HPN+++ + E Y++ E G LFD I + E+ A R Q+L +
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 137 YCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
Y H+ +VHRD+K ENLLL+S D NI++ DFG + H D G+
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDK------IGTAY 193
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQ 250
Y +PE+L G D+WS GV+L+ ++ G PF+ ++ ++LK+V+ K TF P+
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
Query: 251 PEVSTECKELISNILSPVQTRPRLKTIAED----RWLKPKPKSR 290
+VS K+LI +L+ V P ++ A D W++ K +
Sbjct: 252 KKVSESAKDLIRKMLTYV---PSMRISARDALDHEWIQTYTKEQ 292
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 12/240 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L R A+KI+ K V D + + E V++ +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
A +T R+ +MEYA G LF + + E RAR + +++ AL+Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
DIK ENL+LD D +IK++DFG C+ +D + +TFCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNIL 265
+ D W +GVV++ M+ GRLPF + L + + ++ FP+ +S E K L++ +L
Sbjct: 184 RAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLL 240
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 147/284 (51%), Gaps = 22/284 (7%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV 76
T + S Y +++G GS+ V L + + A+K++SK Q K+ L RE++++
Sbjct: 44 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 103
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
K L HPN+++ + E Y++ E G LFD I + E+ A R Q+L +
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 137 YCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
Y H+ +VHRD+K ENLLL+S D NI++ DFG + H D G+
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDK------IGTAY 216
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQ 250
Y +PE+L G D+WS GV+L+ ++ G PF+ ++ ++LK+V+ K TF P+
Sbjct: 217 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
Query: 251 PEVSTECKELISNILSPVQTRPRLKTIAED----RWLKPKPKSR 290
+VS K+LI +L+ V P ++ A D W++ K +
Sbjct: 275 KKVSESAKDLIRKMLTYV---PSMRISARDALDHEWIQTYTKEQ 315
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 12/240 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L R A+KI+ K V D + + E V++ +HP L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 72
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
A +T R+ +MEYA G LF + + E RAR + +++ AL+Y H R VV+R
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 132
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
DIK ENL+LD D +IK++DFG C+ +D + +TFCG+ Y +PE+L+ Y
Sbjct: 133 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNIL 265
+ D W +GVV++ M+ GRLPF + L + + ++ FP+ +S E K L++ +L
Sbjct: 187 RAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLL 243
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 147/284 (51%), Gaps = 22/284 (7%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV 76
T + S Y +++G GS+ V L + + A+K++SK Q K+ L RE++++
Sbjct: 45 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 104
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
K L HPN+++ + E Y++ E G LFD I + E+ A R Q+L +
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 137 YCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
Y H+ +VHRD+K ENLLL+S D NI++ DFG + H D G+
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDK------IGTAY 217
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQ 250
Y +PE+L G D+WS GV+L+ ++ G PF+ ++ ++LK+V+ K TF P+
Sbjct: 218 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
Query: 251 PEVSTECKELISNILSPVQTRPRLKTIAED----RWLKPKPKSR 290
+VS K+LI +L+ V P ++ A D W++ K +
Sbjct: 276 KKVSESAKDLIRKMLTYV---PSMRISARDALDHEWIQTYTKEQ 316
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 12/240 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L R A+KI+ K V D + + E V++ +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
A +T R+ +MEYA G LF + + E RAR + +++ AL+Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
DIK ENL+LD D +IK++DFG C+ +D + +TFCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNIL 265
+ D W +GVV++ M+ GRLPF + L + + ++ FP+ +S E K L++ +L
Sbjct: 184 RAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLL 240
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 147/284 (51%), Gaps = 22/284 (7%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV 76
T + S Y +++G GS+ V L + + A+K++SK Q K+ L RE++++
Sbjct: 27 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 86
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
K L HPN+++ + E Y++ E G LFD I + E+ A R Q+L +
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 137 YCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
Y H+ +VHRD+K ENLLL+S D NI++ DFG + H D G+
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDK------IGTAY 199
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQ 250
Y +PE+L G D+WS GV+L+ ++ G PF+ ++ ++LK+V+ K TF P+
Sbjct: 200 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 257
Query: 251 PEVSTECKELISNILSPVQTRPRLKTIAED----RWLKPKPKSR 290
+VS K+LI +L+ V P ++ A D W++ K +
Sbjct: 258 KKVSESAKDLIRKMLTYV---PSMRISARDALDHEWIQTYTKEQ 298
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 15/256 (5%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLP 70
+D KVT+ + + K++G G++ V L R A+KI+ K V D + +
Sbjct: 3 MDPKVTM---NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ +HP L A +T R+ +MEYA G LF + + E RAR + +
Sbjct: 60 -ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
++ AL+Y H R VV+RDIK ENL+LD D +IK++DFG C+ +D + + FCG
Sbjct: 119 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCG 172
Query: 191 SYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK 249
+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + L + + ++ FP+
Sbjct: 173 TPEYLAPEVLEDNDYGRAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 231
Query: 250 QPEVSTECKELISNIL 265
+S E K L++ +L
Sbjct: 232 T--LSPEAKSLLAGLL 245
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 131/240 (54%), Gaps = 12/240 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L R A+KI+ K V D + + E V++ +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
A +T R+ +MEYA G LF + + E RAR + +++ AL+Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
DIK ENL+LD D +IK++DFG C+ +D + + FCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNIL 265
+ D W +GVV++ M+ GRLPF + L + + ++ FP+ +S E K L++ +L
Sbjct: 184 RAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLL 240
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 131/240 (54%), Gaps = 12/240 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L R A+KI+ K V D + + E V++ +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
A +T R+ +MEYA G LF + + E RAR + +++ AL+Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
DIK ENL+LD D +IK++DFG C+ +D + + FCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNIL 265
+ D W +GVV++ M+ GRLPF + L + + ++ FP+ +S E K L++ +L
Sbjct: 184 RAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLL 240
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 131/240 (54%), Gaps = 12/240 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L R A+KI+ K V D + + E V++ +HP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
A +T R+ +MEYA G LF + + E RAR + +++ AL+Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
DIK ENL+LD D +IK++DFG C+ +D + + FCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNIL 265
+ D W +GVV++ M+ GRLPF + L + + ++ FP+ +S E K L++ +L
Sbjct: 184 RAV-DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLL 240
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 155/287 (54%), Gaps = 18/287 (6%)
Query: 1 MIDSTVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA 60
+++++ D + R T+ + + +G+ +G G + V LAR + VA+K++ K Q
Sbjct: 5 VMENSSGTPDILTRHFTIDD---FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQI 61
Query: 61 PPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYID 120
+ ++ L REIE+ L HPN++R R+Y+I+EYA G L+ ++ D
Sbjct: 62 EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD 121
Query: 121 EIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAA 180
E R +L +AL YCH + V+HRDIK ENLLL +K++DFG+ S A
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGW--------SVHA 173
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQ 240
+ +T CG+ Y PE+++G + + D+W +GV+ + ++ G PF+ +S NE ++
Sbjct: 174 PSLRRKTMCGTLDYLPPEMIEGRMHNEKV-DLWCIGVLCYELLVGNPPFESASHNETYRR 232
Query: 241 -VQNKVTFPKQPEVSTECKELISNIL--SPVQTRPRLKTIAEDRWLK 284
V+ + FP V T ++LIS +L +P + P L ++ W++
Sbjct: 233 IVKVDLKFPAS--VPTGAQDLISKLLRHNPSERLP-LAQVSAHPWVR 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 16/281 (5%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV 76
T + S Y +++G GS+ V L + + A+K++SK Q K+ L RE++++
Sbjct: 21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
K L HPN+ + + E Y++ E G LFD I + E+ A R Q+L +
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 137 YCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
Y H+ +VHRD+K ENLLL+S D NI++ DFG + H D G+
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKXKDK------IGTAY 193
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQ 250
Y +PE+L G D+WS GV+L+ ++ G PF+ ++ ++LK+V+ K TF P+
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
Query: 251 PEVSTECKELISNILSPVQT-RPRLKTIAEDRWLKPKPKSR 290
+VS K+LI L+ V + R + + W++ K +
Sbjct: 252 KKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQ 292
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ A NS F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS----FVGTAQYVSPELLTE- 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 264
Query: 261 ISNIL 265
+ +L
Sbjct: 265 VEKLL 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ A NS F G+ Y SPE+L
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS----FVGTAQYVSPELLTE- 209
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 265
Query: 261 ISNIL 265
+ +L
Sbjct: 266 VEKLL 270
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 128/245 (52%), Gaps = 9/245 (3%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKHPNLIR 86
K+IG GS+ V LAR A+K++ K +K + E V+ K +KHP L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
+ +T ++Y +++Y G LF ++ + E RAR + ++ AL Y H +V+R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
D+K EN+LLDS +I L+DFG C+ N NS + TFCG+ Y +PE+L PY
Sbjct: 164 DLKPENILLDSQGHIVLTDFGL------CKENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILS 266
D W +G VL+ M++G PF + E+ + NK +P ++ + L+ +L
Sbjct: 218 -RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-PLQLKPNITNSARHLLEGLLQ 275
Query: 267 PVQTR 271
+T+
Sbjct: 276 KDRTK 280
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 137/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + +F G+ Y SPE+L
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANSFVGTAQYVSPELLTE- 205
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 261
Query: 261 ISNIL 265
+ +L
Sbjct: 262 VEKLL 266
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 240
Query: 261 ISNIL 265
+ +L
Sbjct: 241 VEKLL 245
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 186
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 242
Query: 261 ISNIL 265
+ +L
Sbjct: 243 VEKLL 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 185
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 241
Query: 261 ISNIL 265
+ +L
Sbjct: 242 VEKLL 246
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 190
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 246
Query: 261 ISNIL 265
+ +L
Sbjct: 247 VEKLL 251
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANAFVGTAQYVSPELLTE- 206
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 262
Query: 261 ISNIL 265
+ +L
Sbjct: 263 VEKLL 267
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 206
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 262
Query: 261 ISNIL 265
+ +L
Sbjct: 263 VEKLL 267
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 183
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 239
Query: 261 ISNIL 265
+ +L
Sbjct: 240 VEKLL 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 264
Query: 261 ISNIL 265
+ +L
Sbjct: 265 VEKLL 269
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 213
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 269
Query: 261 ISNIL 265
+ +L
Sbjct: 270 VEKLL 274
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 206
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 262
Query: 261 ISNIL 265
+ +L
Sbjct: 263 VEKLL 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANXFVGTAQYVSPELLTE- 209
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 265
Query: 261 ISNIL 265
+ +L
Sbjct: 266 VEKLL 270
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 134/248 (54%), Gaps = 16/248 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y ++GTG+++ V LA R VAIK ++K + + + EI V+ +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ E+ +Y+IM+ G LFD I +G+ E A R Q+L+A++Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 144 VHRDIKCENLL---LDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K ENLL LD D I +SDFG ++ S+ T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME-------DPGSVLSTACGTPGYVAPEVL 190
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNKVTFPKQPEVSTEC 257
PY+ + D WS+GV+ + ++ G PF D + +L +Q+ + + P ++S
Sbjct: 191 AQKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 258 KELISNIL 265
K+ I +++
Sbjct: 250 KDFIRHLM 257
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 133/248 (53%), Gaps = 16/248 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y ++GTG+++ V LA R VAIK ++K + + EI V+ +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIAVLHKIKHPN 77
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ E+ +Y+IM+ G LFD I +G+ E A R Q+L+A++Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 144 VHRDIKCENLL---LDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K ENLL LD D I +SDFG ++ S+ T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME-------DPGSVLSTACGTPGYVAPEVL 190
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNKVTFPKQPEVSTEC 257
PY+ + D WS+GV+ + ++ G PF D + +L +Q+ + + P ++S
Sbjct: 191 AQKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 258 KELISNIL 265
K+ I +++
Sbjct: 250 KDFIRHLM 257
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANXFVGTAQYVSPELLTE- 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 264
Query: 261 ISNIL 265
+ +L
Sbjct: 265 VEKLL 269
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANXFVGTAQYVSPELLTE- 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 264
Query: 261 ISNIL 265
+ +L
Sbjct: 265 VEKLL 269
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANXFVGTAQYVSPELLTE- 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
A SD+W++G +++ +V G PF
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 133/248 (53%), Gaps = 16/248 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y ++GTG+++ V LA R VAIK ++K + + EI V+ +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIAVLHKIKHPN 77
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ E+ +Y+IM+ G LFD I +G+ E A R Q+L+A++Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 144 VHRDIKCENLL---LDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K ENLL LD D I +SDFG ++ S+ T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME-------DPGSVLSTACGTPGYVAPEVL 190
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNKVTFPKQPEVSTEC 257
PY+ + D WS+GV+ + ++ G PF D + +L +Q+ + + P ++S
Sbjct: 191 AQKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 258 KELISNIL 265
K+ I +++
Sbjct: 250 KDFIRHLM 257
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 136/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 205
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 261
Query: 261 ISNIL 265
+ +L
Sbjct: 262 VEKLL 266
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 133/248 (53%), Gaps = 16/248 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y ++GTG+++ V LA R VAIK ++K + + EI V+ +KHPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIAVLHKIKHPN 77
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ E+ +Y+IM+ G LFD I +G+ E A R Q+L+A++Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 144 VHRDIKCENLL---LDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K ENLL LD D I +SDFG ++ S+ T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME-------DPGSVLSTACGTPGYVAPEVL 190
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNKVTFPKQPEVSTEC 257
PY+ + D WS+GV+ + ++ G PF D + +L +Q+ + + P ++S
Sbjct: 191 AQKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 258 KELISNIL 265
K+ I +++
Sbjct: 250 KDFIRHLM 257
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANXFVGTAQYVSPELLTE- 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
A SD+W++G +++ +V G PF
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAIKI+SK + ++ P EIE++K
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 78 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 137 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 189
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 249
Query: 254 STECKE 259
E E
Sbjct: 250 WAEVSE 255
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAIKI+SK + ++ P EIE++K
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 183
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 254 STECKE 259
E E
Sbjct: 244 WAEVSE 249
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAIKI+SK + ++ P EIE++K
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 183
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 254 STECKE 259
E E
Sbjct: 244 WAEVSE 249
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAIKI+SK + ++ P EIE++K
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 71 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 129
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 130 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 182
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 242
Query: 254 STECKE 259
E E
Sbjct: 243 WAEVSE 248
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAIKI+SK + ++ P EIE++K
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 183
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 254 STECKE 259
E E
Sbjct: 244 WAEVSE 249
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++TV LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A + S + + + F G+ Y SPE+L
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTA----KVLSPESKQARANXFVGTAQYVSPELLTE- 211
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
A SD+W++G +++ +V G PF
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ GKI+G GS++T LAR S + AIKI+ K + ++ RE +V+ L HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + ++Y + YA+NG L IR G DE R + +++ AL+Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K EN+LL+ D +I+++DFG A+ S + + + F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTE- 206
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL---KQVQNKVTFPKQPEVSTECKEL 260
A SD+W++G +++ +V G PF + NE L K ++ + FP++ + ++L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEK--FFPKARDL 262
Query: 261 ISNIL 265
+ +L
Sbjct: 263 VEKLL 267
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EIXINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 14/256 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L + A+KI+ K V D + L E V++ +HP L
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 215
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH-ERGVVH 145
+ +T R+ +MEYA G LF + + E RAR + +++ AL Y H E+ VV+
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 275
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+K ENL+LD D +IK++DFG C+ D + +TFCG+ Y +PE+L+ Y
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 206 APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNI 264
+ D W +GVV++ M+ GRLPF + +L + + ++ FP+ + E K L+S +
Sbjct: 330 GRAV-DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT--LGPEAKSLLSGL 386
Query: 265 LSPVQTRPRLKTIAED 280
L + RL +ED
Sbjct: 387 LKK-DPKQRLGGGSED 401
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 14/256 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L + A+KI+ K V D + L E V++ +HP L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 212
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH-ERGVVH 145
+ +T R+ +MEYA G LF + + E RAR + +++ AL Y H E+ VV+
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+K ENL+LD D +IK++DFG C+ D + +TFCG+ Y +PE+L+ Y
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 206 APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNI 264
+ D W +GVV++ M+ GRLPF + +L + + ++ FP+ + E K L+S +
Sbjct: 327 GRAV-DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT--LGPEAKSLLSGL 383
Query: 265 LSPVQTRPRLKTIAED 280
L + RL +ED
Sbjct: 384 LKK-DPKQRLGGGSED 398
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 129/224 (57%), Gaps = 11/224 (4%)
Query: 28 KIIGTGSYATVKLARSTRHSGDV-AIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+++G GS+ V LAR + +GD+ A+K++ K V D ++ + + + HP L
Sbjct: 29 RVLGKGSFGKVMLAR-VKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVH 145
+ +T R++ +ME+ G L I+ DE RAR + +++ AL + H++G+++
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY 147
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+K +N+LLD + + KL+DFG C+ + + TFCG+ Y +PEILQ + Y
Sbjct: 148 RDLKLDNVLLDHEGHCKLADFGM------CKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 206 APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFP 248
P + D W+MGV+L+ M+ G PF+ + ++L + + N +V +P
Sbjct: 202 GPAV-DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAI+I+SK + ++ P EIE++K
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 211 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 269
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 270 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 322
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 382
Query: 254 STECKE 259
E E
Sbjct: 383 WAEVSE 388
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 275
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFD--DSSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 275
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFD--DSSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 275
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 139/276 (50%), Gaps = 14/276 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 62
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 178
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
Query: 260 LISNIL-SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL R + I +DRW KP +G +
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWYN-KPLKKGAKR 273
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFD--DSSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 275
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP-----REIEVVKG 78
Y + K +G+G+ VKLA + VAI+I+SK + ++ P EIE++K
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
L HP +I+ ++ YI++E E G LFD + G + E + +F Q+L A+QY
Sbjct: 197 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
HE G++HRD+K EN+LL S D IK++DFG ++ + SL T CG+ Y
Sbjct: 256 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-------LGETSLMRTLCGTPTYL 308
Query: 196 SPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE+L + A + D WS+GV+LF + G PF + LK + PEV
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 254 STECKE 259
E E
Sbjct: 369 WAEVSE 374
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 139/276 (50%), Gaps = 14/276 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFD--DSSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL-SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL R + I +DRW KP +G +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 16/274 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRG 291
L+ IL +P R + I +DRW KP +G
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKG 271
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 139/276 (50%), Gaps = 14/276 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFD--DSSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL-SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL R + I +DRW KP +G +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYN-KPLKKGAKR 275
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 16/274 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRG 291
L+ IL +P R + I +DRW KP +G
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKG 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 144/272 (52%), Gaps = 17/272 (6%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLP 70
+D +VT+ E + K++G G++ V L + A+KI+ K V D + L
Sbjct: 3 MDPRVTMNE---FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ +HP L + +T R+ +MEYA G LF + + E RAR + +
Sbjct: 60 -ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 131 LLEALQYCH-ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
++ AL Y H E+ VV+RD+K ENL+LD D +IK++DFG C+ D + + FC
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFC 172
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFP 248
G+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + +L + + ++ FP
Sbjct: 173 GTPEYLAPEVLEDNDYGRAV-DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 231
Query: 249 KQPEVSTECKELISNILSPVQTRPRLKTIAED 280
+ + E K L+S +L + RL +ED
Sbjct: 232 RT--LGPEAKSLLSGLLKK-DPKQRLGGGSED 260
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 136/256 (53%), Gaps = 14/256 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L + A+KI+ K V D + L E V++ +HP L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 73
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH-ERGVVH 145
+ +T R+ +MEYA G LF + + E RAR + +++ AL Y H E+ VV+
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+K ENL+LD D +IK++DFG C+ D + + FCG+ Y +PE+L+ Y
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 206 APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNI 264
+ D W +GVV++ M+ GRLPF + +L + + ++ FP+ + E K L+S +
Sbjct: 188 GRAV-DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT--LGPEAKSLLSGL 244
Query: 265 LSPVQTRPRLKTIAED 280
L + RL +ED
Sbjct: 245 LKK-DPKQRLGGGSED 259
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRW 282
L+ IL +P R + I +DRW
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRW 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRW 282
L+ IL +P R + I +DRW
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRW 263
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 136/256 (53%), Gaps = 14/256 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
K++G G++ V L + A+KI+ K V D + L E V++ +HP L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 72
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH-ERGVVH 145
+ +T R+ +MEYA G LF + + E RAR + +++ AL Y H E+ VV+
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+K ENL+LD D +IK++DFG C+ D + + FCG+ Y +PE+L+ Y
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 206 APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELISNI 264
+ D W +GVV++ M+ GRLPF + +L + + ++ FP+ + E K L+S +
Sbjct: 187 GRAV-DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT--LGPEAKSLLSGL 243
Query: 265 LSPVQTRPRLKTIAED 280
L + RL +ED
Sbjct: 244 LKK-DPKQRLGGGSED 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRW 282
L+ IL +P R + I +DRW
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 139/274 (50%), Gaps = 16/274 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINAMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRG 291
L+ IL +P R + I +DRW KP +G
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKG 272
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 139/271 (51%), Gaps = 21/271 (7%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGL 79
S Y V + +G G+++ V+ + A KI+ +K + D+ K L RE + + L
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKL 85
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++R +I+ Y++ + G LF+ I + + E A Q+LE++ YCH
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 140 ERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
G+VHR++K ENLLL S +KL+DFG A D+ F G+ Y S
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGYLS 198
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE---V 253
PE+L+ PY+ + DIW+ GV+L+ ++ G PF D + L Q++ PE V
Sbjct: 199 PEVLKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 257
Query: 254 STECKELISNILSPVQTRPRLKTIAEDRWLK 284
+ E K LI ++L+ P+ K I D+ LK
Sbjct: 258 TPEAKSLIDSMLT---VNPK-KRITADQALK 284
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 139/271 (51%), Gaps = 21/271 (7%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGL 79
S Y V + +G G+++ V+ + A KI+ +K + D+ K L RE + + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKL 62
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++R +I+ Y++ + G LF+ I + + E A Q+LE++ YCH
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 140 ERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
G+VHR++K ENLLL S +KL+DFG A D+ F G+ Y S
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGYLS 175
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE---V 253
PE+L+ PY+ + DIW+ GV+L+ ++ G PF D + L Q++ PE V
Sbjct: 176 PEVLKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 254 STECKELISNILSPVQTRPRLKTIAEDRWLK 284
+ E K LI ++L+ P+ K I D+ LK
Sbjct: 235 TPEAKSLIDSMLT---VNPK-KRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 139/271 (51%), Gaps = 21/271 (7%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGL 79
S Y V + +G G+++ V+ + A KI+ +K + D+ K L RE + + L
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKL 61
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++R +I+ Y++ + G LF+ I + + E A Q+LE++ YCH
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 140 ERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
G+VHR++K ENLLL S +KL+DFG A D+ F G+ Y S
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGYLS 174
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE---V 253
PE+L+ PY+ + DIW+ GV+L+ ++ G PF D + L Q++ PE V
Sbjct: 175 PEVLKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 233
Query: 254 STECKELISNILSPVQTRPRLKTIAEDRWLK 284
+ E K LI ++L+ P+ K I D+ LK
Sbjct: 234 TPEAKSLIDSMLT---VNPK-KRITADQALK 260
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP--PDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EIXINKMLNH 64
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ G+ Y +PE+L+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MXGTLPYVAPELLK 180
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 241 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 275
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+ V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ CG+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MCGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP--PDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EIXINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ G+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MXGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 139/271 (51%), Gaps = 21/271 (7%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGL 79
S Y V + +G G+++ V+ + A KI+ +K + D+ K L RE + + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKL 62
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN++R +I+ Y++ + G LF+ I + + E A Q+LE++ YCH
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 140 ERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
G+VHR++K ENLLL S +KL+DFG A D+ F G+ Y S
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTPGYLS 175
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE---V 253
PE+L+ PY+ + DIW+ GV+L+ ++ G PF D + L Q++ PE V
Sbjct: 176 PEVLKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 254 STECKELISNILSPVQTRPRLKTIAEDRWLK 284
+ E K LI ++L+ P+ K I D+ LK
Sbjct: 235 TPEAKSLIDSMLT---VNPK-KRITADQALK 261
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ G+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MXGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP--PDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ G+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MXGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRWLKPKPKSRGVDK 294
L+ IL +P R + I +DRW KP +G +
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRWYN-KPLKKGAKR 274
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKHP 82
+ + ++IG GSYA V L R + A+++V K D ++ E V + HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
L+ +T R++ ++EY G L ++ Q + E AR + ++ AL Y HERG
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+++RD+K +N+LLDS+ +IKL+D+G C+ + TFCG+ Y +PEIL+G
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
Y + D W++GV++F M+ GR PFD
Sbjct: 228 EDYGFSV-DWWALGVLMFEMMAGRSPFD 254
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKHP 82
+ + ++IG GSYA V L R + A+K+V K D ++ E V + HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
L+ +T R++ ++EY G L ++ Q + E AR + ++ AL Y HERG
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+++RD+K +N+LLDS+ +IKL+D+G C+ + FCG+ Y +PEIL+G
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
Y + D W++GV++F M+ GR PFD
Sbjct: 196 EDYGFSV-DWWALGVLMFEMMAGRSPFD 222
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--PPDYLKKFLPREIEVVKGLKH 81
+ + + +G G+Y V+LA + VA+KIV +A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
N+++F + Y+ +EY G LFD I + E A+R+F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+ HRDIK ENLLLD N+K+SDFG A R N + L++ G+ Y +PE+L+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNK-MXGTLPYVAPELLK 179
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTECKE 259
+ D+WS G+VL AM+ G LP+D S E + K ++ +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 260 LISNIL--SPVQTRPRLKTIAEDRW 282
L+ IL +P R + I +DRW
Sbjct: 240 LLHKILVENP-SARITIPDIKKDRW 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 132/251 (52%), Gaps = 18/251 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + + +G G+++ V+ + A KI+ +K + D+ K L RE + + LKHP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 81
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
N++R +I Y+I + G LF+ I + Y E A Q+LEA+ +CH+ G
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 143 VVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
VVHRD+K ENLLL S +KL+DFG A + F G+ Y SPE+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA------IEVEGEQQAWFGFAGTPGYLSPEV 195
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPE---VST 255
L+ PY + D+W+ GV+L+ ++ G PF D + L +Q++ FP PE V+
Sbjct: 196 LRKDPYGKPV-DLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP-SPEWDTVTP 253
Query: 256 ECKELISNILS 266
E K+LI+ +L+
Sbjct: 254 EAKDLINKMLT 264
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKHP 82
+ + ++IG GSYA V L R + A+K+V K D ++ E V + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
L+ +T R++ ++EY G L ++ Q + E AR + ++ AL Y HERG
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+++RD+K +N+LLDS+ +IKL+D+G C+ + FCG+ Y +PEIL+G
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
Y + D W++GV++F M+ GR PFD
Sbjct: 181 EDYGFSV-DWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKHP 82
+ + ++IG GSYA V L R + A+K+V K D ++ E V + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
L+ +T R++ ++EY G L ++ Q + E AR + ++ AL Y HERG
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+++RD+K +N+LLDS+ +IKL+D+G C+ + FCG+ Y +PEIL+G
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
Y + D W++GV++F M+ GR PFD
Sbjct: 185 EDYGFSV-DWWALGVLMFEMMAGRSPFD 211
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 125/246 (50%), Gaps = 15/246 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ VG ++G GS+A V A S +VAIK++ K + + + E+++ LKHP+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEALQYCHERG 142
++ E ++ VY+++E NG + ++ + E AR + Q++ + Y H G
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
++HRD+ NLLL + NIK++DFG A + T CG+ Y SPEI
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLA------TQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFP--KQPE-VSTECKE 259
+ SD+WS+G + + ++ GR PFD +V K NKV + P +S E K+
Sbjct: 187 SAHGLE-SDVWSLGCMFYTLLIGRPPFDTDTV----KNTLNKVVLADYEMPSFLSIEAKD 241
Query: 260 LISNIL 265
LI +L
Sbjct: 242 LIHQLL 247
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 132/255 (51%), Gaps = 21/255 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ + V + A+K++ K KK + EI V+ L HPN+I+ +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKE 115
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
ET + +++E G LFD I +GY E A Q+LEA+ Y HE G+VHRD+K
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 150 CENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
ENLL + D +K++DFG ++ L +T CG+ Y +PEIL+G Y
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKI-------VEHQVLMKTVCGTPGYCAPEILRGCAYG 228
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTF---PKQPEVSTECKELIS 262
P + D+WS+G++ + ++ G PF D ++ + +++ N + P EVS K+L+
Sbjct: 229 PEV-DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR 287
Query: 263 NILSPVQTRPRLKTI 277
++ + + RL T
Sbjct: 288 KLIV-LDPKKRLTTF 301
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 18/251 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + + +G G+++ V+ + A KI+ +K + D+ K L RE + + LKHP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 63
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
N++R +I Y++ + G LF+ I + Y E A Q+LE++ +CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 143 VVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+VHRD+K ENLLL S +KL+DFG A D F G+ Y SPE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA------IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPE---VST 255
L+ PY + D+W+ GV+L+ ++ G PF D + L +Q++ FP PE V+
Sbjct: 178 LRKDPYGKPV-DMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP-SPEWDTVTP 235
Query: 256 ECKELISNILS 266
E K+LI+ +L+
Sbjct: 236 EAKDLINKMLT 246
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y V IGTGSY + R + G + + + + K+ L E+ +++ LKHPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRR-KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 84 LIRFLQAI--ETTHRVYIIMEYAENGSLFDII----RGQGYIDEIRARRWFGQLLEALQY 137
++R+ I T +YI+MEY E G L +I + + Y+DE R QL AL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 138 CHERG-----VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
CH R V+HRD+K N+ LD N+KL DFG AR D S ++TF G+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL------NHDTSFAKTFVGTP 180
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQP- 251
Y SPE + + Y SDIWS+G +L+ + PF S EL +++ F + P
Sbjct: 181 YYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFRRIPY 238
Query: 252 EVSTECKELISNILSPVQT-RPRLKTIAED 280
S E E+I+ +L+ RP ++ I E+
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 18/251 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + + +G G+++ V+ + A KI+ +K + D+ K L RE + + LKHP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 63
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
N++R +I Y++ + G LF+ I + Y E A Q+LE++ +CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 143 VVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+VHRD+K ENLLL S +KL+DFG A D F G+ Y SPE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA------IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPE---VST 255
L+ PY + D+W+ GV+L+ ++ G PF D + L +Q++ FP PE V+
Sbjct: 178 LRKDPYGKPV-DMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP-SPEWDTVTP 235
Query: 256 ECKELISNILS 266
E K+LI+ +L+
Sbjct: 236 EAKDLINKMLT 246
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 134/258 (51%), Gaps = 13/258 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ L +ST IK ++ + ++ RE+ V+ +KHPN++++ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEIN-ISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYI--DEIRARRWFGQLLEALQYCHERGVVHRD 147
+ E +YI+M+Y E G LF I Q + E + WF Q+ AL++ H+R ++HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
IK +N+ L D ++L DFG AR + L+ G+ Y SPEI + PY
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVL------NSTVELARACIGTPYYLSPEICENKPYN- 203
Query: 208 HLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL-- 265
+ SDIW++G VL+ + + F+ S+ L+ ++ + P S + + L+S +
Sbjct: 204 NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKR 263
Query: 266 SPVQTRPRLKTIAEDRWL 283
+P + RP + +I E ++
Sbjct: 264 NP-RDRPSVNSILEKGFI 280
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 17/271 (6%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S Y K +G+G+Y V L R + AIKI+ K K L E+ V+K L
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL-EEVAVLKLLD 94
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+++ E Y++ME + G LFD I + +E+ A Q+L + Y H+
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 141 RGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+VHRD+K ENLLL+S D IK+ DFG + + + E +Y Y +P
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK------KMKERLGTAY-YIAP 207
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQPEVS 254
E+L+ D+WS+GV+LF ++ G PF + E+L++V+ K TF P+ VS
Sbjct: 208 EVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS 265
Query: 255 TECKELISNILS-PVQTRPRLKTIAEDRWLK 284
K+LI +L Q R + E W+K
Sbjct: 266 EGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 128/244 (52%), Gaps = 18/244 (7%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+++G+G+++ V L + A+K + K P + L EI V+K +KH N++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKK---SPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
E+T Y++M+ G LFD I +G E A Q+L A++Y HE G+VHRD
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 148 IKCENLLL---DSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
+K ENLL + + I ++DFG ++ N + T CG+ Y +PE+L P
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKME--------QNGIMSTACGTPGYVAPEVLAQKP 183
Query: 205 YAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFPKQPEVSTECKELI 261
Y+ + D WS+GV+ + ++ G PF + + ++L ++++ + P ++S K+ I
Sbjct: 184 YSKAV-DCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFI 242
Query: 262 SNIL 265
++L
Sbjct: 243 CHLL 246
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 18/251 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + + +G G+++ V+ + A I+ +K + D+ K L RE + + LKHP
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK--LEREARICRLLKHP 70
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
N++R +I Y+I + G LF+ I + Y E A Q+LEA+ +CH+ G
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 143 VVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
VVHR++K ENLLL S +KL+DFG A + F G+ Y SPE+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA------IEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPE---VST 255
L+ PY + D+W+ GV+L+ ++ G PF D + L +Q++ FP PE V+
Sbjct: 185 LRKDPYGKPV-DLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP-SPEWDTVTP 242
Query: 256 ECKELISNILS 266
E K+LI+ +L+
Sbjct: 243 EAKDLINKMLT 253
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y V IGTGSY + R + G + + + + K+ L E+ +++ LKHPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRR-KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 84 LIRFLQAI--ETTHRVYIIMEYAENGSLFDII----RGQGYIDEIRARRWFGQLLEALQY 137
++R+ I T +YI+MEY E G L +I + + Y+DE R QL AL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 138 CHERG-----VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
CH R V+HRD+K N+ LD N+KL DFG AR D S ++ F G+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL------NHDTSFAKAFVGTP 180
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQP- 251
Y SPE + + Y SDIWS+G +L+ + PF S EL +++ F + P
Sbjct: 181 YYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFRRIPY 238
Query: 252 EVSTECKELISNILSPVQT-RPRLKTIAED 280
S E E+I+ +L+ RP ++ I E+
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 22/251 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLK---KFLPREIEVVKGLK 80
+ + +GTG+++ V LA A+K + P LK + EI V++ +K
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI-----PKKALKGKESSIENEIAVLRKIK 78
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H N++ E+ + +Y++M+ G LFD I +G+ E A Q+L+A+ Y H
Sbjct: 79 HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 141 RGVVHRDIKCENLLL---DSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
G+VHRD+K ENLL D + I +SDFG ++ + + T CG+ Y +P
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK-------GDVMSTACGTPGYVAP 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNKVTFPKQPEVS 254
E+L PY+ + D WS+GV+ + ++ G PF D + ++L +Q+ + + P ++S
Sbjct: 192 EVLAQKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDIS 250
Query: 255 TECKELISNIL 265
K+ I N++
Sbjct: 251 DSAKDFIRNLM 261
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 134/272 (49%), Gaps = 27/272 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPR---EIEVVKGLK 80
YT+ IG GS+ VK+A +I + P Y + + R EIE++K L
Sbjct: 11 YTLENTIGRGSWGEVKIAVQK------GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+IR + E +Y++ME G LF+ + + E A R +L A+ YCH+
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 141 RGVVHRDIKCENLLL--DS-DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN L DS D +KL DFG A + + T G+ Y SP
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-------ARFKPGKMMRTKVGTPYYVSP 177
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQP--EVS 254
++L+G+ Y P D WS GV+++ ++ G PF + E +LK + TFP++ VS
Sbjct: 178 QVLEGL-YGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS 235
Query: 255 TECKELISNIL--SPVQTRPRLKTIAEDRWLK 284
+ + LI +L SP Q L+ + E W +
Sbjct: 236 PQAESLIRRLLTKSPKQRITSLQAL-EHEWFE 266
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 15/252 (5%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S Y K +G+G+Y V L + + AIKI+ K L E+ V+K L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+++ + E Y++ME G LFD I + E+ A Q+L Y H+
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 141 RGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+VHRD+K ENLLL+S D IK+ DFG + AH + G+ Y +P
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKER------LGTAYYIAP 175
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQPEVS 254
E+L+ D+WS GV+L+ ++ G PF + E+LK+V+ K +F P +VS
Sbjct: 176 EVLR--KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVS 233
Query: 255 TECKELISNILS 266
E K+L+ +L+
Sbjct: 234 DEAKQLVKLMLT 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 126/238 (52%), Gaps = 11/238 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL-KHPNLIRF 87
++G GS+ V LA AIKI+ K D + E V+ L K P L +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+T R+Y +MEY G L I+ G E +A + ++ L + H+RG+++RD
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K +N++LDS+ +IK++DFG + HM D + FCG+ Y +PEI+ PY
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCKEHM------MDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 208 HLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK--QPEVSTECKELIS 262
+ D W+ GV+L+ M+ G+ PFD +EL + + ++ V++PK E + CK L++
Sbjct: 200 SV-DWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMT 256
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 134/272 (49%), Gaps = 27/272 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPR---EIEVVKGLK 80
YT+ IG GS+ VK+A +I + P Y + + R EIE++K L
Sbjct: 28 YTLENTIGRGSWGEVKIAVQK------GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+IR + E +Y++ME G LF+ + + E A R +L A+ YCH+
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 141 RGVVHRDIKCENLLL--DS-DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
V HRD+K EN L DS D +KL DFG A + + T G+ Y SP
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-------ARFKPGKMMRTKVGTPYYVSP 194
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQP--EVS 254
++L+G+ Y P D WS GV+++ ++ G PF + E +LK + TFP++ VS
Sbjct: 195 QVLEGL-YGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS 252
Query: 255 TECKELISNIL--SPVQTRPRLKTIAEDRWLK 284
+ + LI +L SP Q L+ + E W +
Sbjct: 253 PQAESLIRRLLTKSPKQRITSLQAL-EHEWFE 283
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVK 77
L+ + + K++G GS+ V LA + + AIK + K V D ++ + + +
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 78 GLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+HP L +T ++ +MEY G L I+ D RA + +++ LQ+
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
H +G+V+RD+K +N+LLD D +IK++DFG C+ N ++ + FCG+ Y +P
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGM------CKENMLGDAKTNEFCGTPDYIAP 188
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPEVSTE 256
EIL G Y H D WS GV+L+ M+ G+ PF EL ++ + +P+ E E
Sbjct: 189 EILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE--KE 245
Query: 257 CKELISNIL 265
K+L+ +
Sbjct: 246 AKDLLVKLF 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVK 77
L+ + + K++G GS+ V LA + + AIK + K V D ++ + + +
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 78 GLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+HP L +T ++ +MEY G L I+ D RA + +++ LQ+
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
H +G+V+RD+K +N+LLD D +IK++DFG C+ N ++ + FCG+ Y +P
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGM------CKENMLGDAKTNXFCGTPDYIAP 187
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPEVSTE 256
EIL G Y H D WS GV+L+ M+ G+ PF EL ++ + +P+ E E
Sbjct: 188 EILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE--KE 244
Query: 257 CKELISNIL 265
K+L+ +
Sbjct: 245 AKDLLVKLF 253
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 15/252 (5%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S Y K +G+G+Y V L + + AIKI+ K L E+ V+K L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+++ + E Y++ME G LFD I + E+ A Q+L Y H+
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 141 RGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+VHRD+K ENLLL+S D IK+ DFG + AH + G+ Y +P
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKER------LGTAYYIAP 192
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTF--PKQPEVS 254
E+L+ D+WS GV+L+ ++ G PF + E+LK+V+ K +F P +VS
Sbjct: 193 EVLR--KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVS 250
Query: 255 TECKELISNILS 266
E K+L+ +L+
Sbjct: 251 DEAKQLVKLMLT 262
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 130/249 (52%), Gaps = 16/249 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + ++G GS+ V + + A+K+++K A L RE+E++K L HPN
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPN 82
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + +E + YI+ E G LFD I + E A R Q+ + Y H+ +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 144 VHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K EN+LL+S D +IK+ DFG + + N+ + G+ Y +PE+L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-------NTKMKDRIGTAYYIAPEVL 195
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTF--PKQPEVSTEC 257
+G D+WS GV+L+ ++ G PF + ++LK+V+ K F P+ +S +
Sbjct: 196 RGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 258 KELISNILS 266
K+LI +L+
Sbjct: 254 KDLIRKMLT 262
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 142/270 (52%), Gaps = 31/270 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPP----DYLKKFLPREIEVVKGL 79
Y + +G G +TV LA T + VAIK + PP + LK+F RE+ L
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIF---IPPREKEETLKRF-EREVHNSSQL 68
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
H N++ + E Y++MEY E +L + I G + A + Q+L+ +++ H
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSET--FCGSYAYASP 197
+ +VHRDIK +N+L+DS+ +K+ DFG A+A ++ SL++T G+ Y SP
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA-------LSETSLTQTNHVLGTVQYFSP 181
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQNKVTFPKQPEVSTE 256
E +G +DI+S+G+VL+ M+ G PF+ +++V+ +K +Q+ V P V+T+
Sbjct: 182 EQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV-----PNVTTD 235
Query: 257 CKELISNILSPVQTRP-------RLKTIAE 279
++ I LS V R R KTI E
Sbjct: 236 VRKDIPQSLSNVILRATEKDKANRYKTIQE 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 130/249 (52%), Gaps = 16/249 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + ++G GS+ V + + A+K+++K A L RE+E++K L HPN
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPN 82
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + +E + YI+ E G LFD I + E A R Q+ + Y H+ +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 144 VHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K EN+LL+S D +IK+ DFG + + N+ + G+ Y +PE+L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-------NTKMKDRIGTAYYIAPEVL 195
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTF--PKQPEVSTEC 257
+G D+WS GV+L+ ++ G PF + ++LK+V+ K F P+ +S +
Sbjct: 196 RGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 258 KELISNILS 266
K+LI +L+
Sbjct: 254 KDLIRKMLT 262
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 130/249 (52%), Gaps = 16/249 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + ++G GS+ V + + A+K+++K A L RE+E++K L HPN
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPN 82
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++ + +E + YI+ E G LFD I + E A R Q+ + Y H+ +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 144 VHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VHRD+K EN+LL+S D +IK+ DFG + + N+ + G+ Y +PE+L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-------NTKMKDRIGTAYYIAPEVL 195
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTF--PKQPEVSTEC 257
+G D+WS GV+L+ ++ G PF + ++LK+V+ K F P+ +S +
Sbjct: 196 RGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 258 KELISNILS 266
K+LI +L+
Sbjct: 254 KDLIRKMLT 262
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 18/251 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + + IG G+++ V+ + A KI+ +K + D+ K L RE + + LKH
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK--LEREARICRLLKHS 63
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
N++R +I Y++ + G LF+ I + Y E A Q+LEA+ +CH+ G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 143 VVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
VVHRD+K ENLLL S +KL+DFG A D F G+ Y SPE+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA------IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPE---VST 255
L+ Y + DIW+ GV+L+ ++ G PF D ++L +Q++ FP PE V+
Sbjct: 178 LRKEAYGKPV-DIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP-SPEWDTVTP 235
Query: 256 ECKELISNILS 266
E K LI+ +L+
Sbjct: 236 EAKNLINQMLT 246
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 25/272 (9%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDY------LKKFLPREIE 74
S Y+ +G+G++ V A + +V +K + K + D L K + EI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK-VTLEIA 81
Query: 75 VVKGLKHPNLIRFLQAIETTHRVYIIMEYAENG-SLFDIIRGQGYIDEIRARRWFGQLLE 133
++ ++H N+I+ L E ++ME +G LF I +DE A F QL+
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
A+ Y + ++HRDIK EN+++ D+ IKL DFG A R + L TFCG+
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK-------LFYTFCGTIE 194
Query: 194 YASPEILQGIPY-APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE 252
Y +PE+L G PY P L ++WS+GV L+ +VF PF EL + V+ + P
Sbjct: 195 YCAPEVLMGNPYRGPEL-EMWSLGVTLYTLVFEENPF-----CELEETVEAAIHPPYL-- 246
Query: 253 VSTECKELISNILSPV-QTRPRLKTIAEDRWL 283
VS E L+S +L PV + R L+ + D W+
Sbjct: 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 136/245 (55%), Gaps = 15/245 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDV-AIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
+ + + +GTGS+ V L RS RH+G A+K++ K + E ++ + HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRS-RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
+IR + ++++IM+Y E G LF ++R A+ + ++ AL+Y H +
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+++RD+K EN+LLD + +IK++DFGFA+ D ++ CG+ Y +PE++
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKY-------VPD--VTYXLCGTPDYIAPEVVST 177
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQPEVSTECKELI 261
PY + D WS G++++ M+ G PF DS+ + +++ N ++ FP P + + K+L+
Sbjct: 178 KPYNKSI-DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDLL 234
Query: 262 SNILS 266
S +++
Sbjct: 235 SRLIT 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 136/272 (50%), Gaps = 27/272 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK---VQAPPDYLKKFLPREI----EVV 76
Y +G ++G G + TV VAIK++ + + P P E+ +V
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGS-LFDIIRGQGYIDEIRARRWFGQLLEAL 135
G HP +IR L ET +++E LFD I +G + E +R +FGQ++ A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSET-FCGSYA 193
Q+CH RGVVHRDIK EN+L+D KL DFG S A + T F G+
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG---------SGALLHDEPYTDFDGTRV 203
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
Y+ PE + Y + +WS+G++L+ MV G +PF+ E+L + ++ FP V
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD--QEIL---EAELHFPAH--V 256
Query: 254 STECKELISNILSP-VQTRPRLKTIAEDRWLK 284
S +C LI L+P +RP L+ I D W++
Sbjct: 257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 144/271 (53%), Gaps = 37/271 (13%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ------------------------ 59
YT+ IG GSY VKLA + + A+K++SK +
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDIIRGQG 117
P +++ +EI ++K L HPN+++ ++ ++ + +Y++ E G + ++ +
Sbjct: 75 QPRGPIEQVY-QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 118 YIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRS 177
+ E +AR +F L++ ++Y H + ++HRDIK NLL+ D +IK++DFG +
Sbjct: 134 -LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF----- 187
Query: 178 NAADNSLSETFCGSYAYASPEILQGIP--YAPHLSDIWSMGVVLFAMVFGRLPFDDSSVN 235
+D LS T G+ A+ +PE L ++ D+W+MGV L+ VFG+ PF D +
Sbjct: 188 KGSDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 236 ELLKQVQNK-VTFPKQPEVSTECKELISNIL 265
L +++++ + FP QP+++ + K+LI+ +L
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRML 277
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y V IGTGSY + R + G + + + + K+ L E+ +++ LKHPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRR-KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 84 LIRFLQAI--ETTHRVYIIMEYAENGSLFDII----RGQGYIDEIRARRWFGQLLEALQY 137
++R+ I T +YI+MEY E G L +I + + Y+DE R QL AL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 138 CHERG-----VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
CH R V+HRD+K N+ LD N+KL DFG AR D ++ F G+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL------NHDEDFAKEFVGTP 180
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQP- 251
Y SPE + + Y SDIWS+G +L+ + PF S EL +++ F + P
Sbjct: 181 YYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFRRIPY 238
Query: 252 EVSTECKELISNILSPVQT-RPRLKTIAED 280
S E E+I+ +L+ RP ++ I E+
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+++ Y V K+IG G++ V+L R A+K++SK + F E +++
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
P +++ A + +Y++MEY G L +++ + E AR + +++ AL
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAI 189
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H G +HRD+K +N+LLD ++KL+DFG + N +T G+ Y SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-----MKMNKEGMVRCDTAVGTPDYISPE 244
Query: 199 ILQ---GIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQV--QNKVTFPKQPE 252
+L+ G Y D WS+GV L+ M+ G PF DS V K + +N +TFP +
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 253 VSTECKELISNILSPVQTR 271
+S E K LI L+ + R
Sbjct: 305 ISKEAKNLICAFLTDREVR 323
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+++ Y V K+IG G++ V+L R A+K++SK + F E +++
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
P +++ A + +Y++MEY G L +++ + E AR + +++ AL
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAI 184
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H G +HRD+K +N+LLD ++KL+DFG + N +T G+ Y SPE
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-----MKMNKEGMVRCDTAVGTPDYISPE 239
Query: 199 ILQ---GIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQV--QNKVTFPKQPE 252
+L+ G Y D WS+GV L+ M+ G PF DS V K + +N +TFP +
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 299
Query: 253 VSTECKELISNILSPVQTR 271
+S E K LI L+ + R
Sbjct: 300 ISKEAKNLICAFLTDREVR 318
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+++ Y V K+IG G++ V+L R A+K++SK + F E +++
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
P +++ A + +Y++MEY G L +++ + E AR + +++ AL
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAI 189
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H G +HRD+K +N+LLD ++KL+DFG + N +T G+ Y SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-----MKMNKEGMVRCDTAVGTPDYISPE 244
Query: 199 ILQ---GIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQV--QNKVTFPKQPE 252
+L+ G Y D WS+GV L+ M+ G PF DS V K + +N +TFP +
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 253 VSTECKELISNILSPVQTR 271
+S E K LI L+ + R
Sbjct: 305 ISKEAKNLICAFLTDREVR 323
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPP-------DYLKKF---LPREIEVVKGL 79
+G+G+Y V L + + AIK++ K Q ++KF + EI ++K L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
HPN+I+ E Y++ E+ E G LF+ I + DE A Q+L + Y H
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 140 ERGVVHRDIKCENLLLDSD---YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ +VHRDIK EN+LL++ NIK+ DFG + + D L + G+ Y +
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF------SKDYKLRDRL-GTAYYIA 216
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNK---VTFPKQPEV 253
PE+L+ D+WS GV+++ ++ G PF + +++K+V+ F +
Sbjct: 217 PEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI 274
Query: 254 STECKELISNILS-PVQTRPRLKTIAEDRWLKP 285
S E KELI +L+ R + RW+K
Sbjct: 275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 141/274 (51%), Gaps = 32/274 (11%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK-HPNLIR 86
K +G GS++ + + + A+KI+SK ++ +EI +K + HPN+++
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVK 70
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
+ +++ME G LF+ I+ + + E A +L+ A+ + H+ GVVHR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 147 DIKCENLLL---DSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
D+K ENLL + + IK+ DFGFAR DN +T C + YA+PE+L
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARL------KPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDD-------SSVNELLKQVQNKVTFPKQPE---- 252
Y D+WS+GV+L+ M+ G++PF +S E++K+++ K F + E
Sbjct: 185 GYDES-CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK-KGDFSFEGEAWKN 242
Query: 253 VSTECKELISNILSPVQTRPRLKT--IAEDRWLK 284
VS E K+LI +L+ V RLK + + WL+
Sbjct: 243 VSQEAKDLIQGLLT-VDPNKRLKMSGLRYNEWLQ 275
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 47/278 (16%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSK--VQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G+G++ V L + IK ++K Q P + ++ EIEV+K L HPN+I+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA----EIEVLKSLDHPNIIKI 85
Query: 88 LQAIETTHRVYIIMEYAENGSLFDII-----RG----QGYIDEIRARRWFGQLLEALQYC 138
+ E H +YI+ME E G L + I RG +GY+ E+ Q++ AL Y
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL-----MKQMMNALAYF 140
Query: 139 HERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
H + VVH+D+K EN+L IK+ DFG A + S G+ Y
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-------KSDEHSTNAAGTALYM 193
Query: 196 SPEILQ-GIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
+PE+ + + + DIWS GVV++ ++ G LPF +S L++VQ K T+ K+P +
Sbjct: 194 APEVFKRDVTFK---CDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQKATY-KEPNYA 245
Query: 255 TECK-------ELISNILSP-VQTRPRLKTIAEDRWLK 284
EC+ +L+ +L+ + RP + W K
Sbjct: 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 18/251 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + + +G G+++ V+ + + A KI+ +K + D+ K L RE + + LKHP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 90
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERG 142
N++R +I Y++ + G LF+ I + Y E A Q+LE++ + H+
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 143 VVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+VHRD+K ENLLL S +KL+DFG A + F G+ Y SPE+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA------IEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQ-NKVTFPKQPE---VST 255
L+ PY + DIW+ GV+L+ ++ G PF D ++L +Q++ FP PE V+
Sbjct: 205 LRKDPYGKPV-DIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP-SPEWDTVTP 262
Query: 256 ECKELISNILS 266
E K LI+ +L+
Sbjct: 263 EAKNLINQMLT 273
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSK--VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
++G GS+ V L+ A+KI+ K V D + + + + G K P L +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 85
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
+T R+Y +MEY G L I+ G E A + ++ L + +G+++R
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
D+K +N++LDS+ +IK++DFG C+ N D ++ FCG+ Y +PEI+ PY
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGM------CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 199
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK--QPEVSTECKELIS 262
+ D W+ GV+L+ M+ G+ PF+ +EL + + ++ V +PK E CK L++
Sbjct: 200 KSV-DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 257
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 14/278 (5%)
Query: 2 IDSTVQVQDDIDRKVTVLE--SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ 59
ID+ + + I +K+ L+ + Y V K+IG G++ V+L R A+K++SK +
Sbjct: 53 IDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFE 112
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYI 119
F E +++ P +++ A + +Y++MEY G L +++ +
Sbjct: 113 MIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-V 171
Query: 120 DEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNA 179
E A+ + +++ AL H G++HRD+K +N+LLD ++KL+DFG + +
Sbjct: 172 PEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-----MKMDE 226
Query: 180 ADNSLSETFCGSYAYASPEILQ---GIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVN 235
+T G+ Y SPE+L+ G Y D WS+GV LF M+ G PF DS V
Sbjct: 227 TGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG 286
Query: 236 ELLKQV--QNKVTFPKQPEVSTECKELISNILSPVQTR 271
K + +N + FP+ E+S K LI L+ + R
Sbjct: 287 TYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVR 324
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSK--VQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
++G GS+ V L+ A+KI+ K V D + + + + G K P L +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 406
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
+T R+Y +MEY G L I+ G E A + ++ L + +G+++R
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
D+K +N++LDS+ +IK++DFG C+ N D ++ FCG+ Y +PEI+ PY
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGM------CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 520
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK--QPEVSTECKELIS 262
+ D W+ GV+L+ M+ G+ PF+ +EL + + ++ V +PK E CK L++
Sbjct: 521 KSV-DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 578
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R A + T CG+ Y +PEI+ Y
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGA----TWTLCGTPEYLAPEIILSKGYNK 238
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 239 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 294
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT + IG G+ TV A +VAI+ ++ Q P K+ + EI V++ K+PN
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPN 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ +L + ++++MEY GSL D++ + +DE + + L+AL++ H V
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK +N+LL D ++KL+DFGF C + S T G+ + +PE++
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
Y P + DIWS+G++ M+ G P+
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPY 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 142/264 (53%), Gaps = 18/264 (6%)
Query: 9 QDDIDRKVTVLESHGYTVGKIIGTGSYATVKLAR--STRHSGDV-AIKIVSK---VQAPP 62
+ ++R + + + +++G G Y V R + ++G + A+K++ K V+
Sbjct: 4 ETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK 63
Query: 63 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI 122
D R I ++ +KHP ++ + A +T ++Y+I+EY G LF + +G E
Sbjct: 64 DTAHTKAERNI--LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 123 RARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADN 182
A + ++ AL + H++G+++RD+K EN++L+ ++KL+DFG C+ + D
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL------CKESIHDG 175
Query: 183 SLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV- 241
+++ TFCG+ Y +PEIL + + D WS+G +++ M+ G PF + + + ++
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAV-DWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
Query: 242 QNKVTFPKQPEVSTECKELISNIL 265
+ K+ P P ++ E ++L+ +L
Sbjct: 235 KCKLNLP--PYLTQEARDLLKKLL 256
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K IGTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + T CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWTLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K IGTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K IGTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + T CG+ Y +PEI+ Y
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWTLCGTPEYLAPEIILSKGYNK 203
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 204 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 259
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 10 DDIDRKVTVLESHG-----YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDY 64
++I K+ ++ S G YT + IG G+ TV A +VAI+ ++ Q P
Sbjct: 4 EEILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-- 61
Query: 65 LKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRA 124
K+ + EI V++ K+PN++ +L + ++++MEY GSL D++ + +DE +
Sbjct: 62 -KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQI 119
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSL 184
+ L+AL++ H V+HR+IK +N+LL D ++KL+DFGF C + S
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGF------CAQITPEQSK 173
Query: 185 SETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
T G+ + +PE++ Y P + DIWS+G++ M+ G P+
Sbjct: 174 RSTMVGTPYWMAPEVVTRKAYGPKV-DIWSLGIMAIEMIEGEPPY 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 11/206 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT + IG G+ TV A +VAI+ ++ Q P K+ + EI V++ K+PN
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPN 79
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ +L + ++++MEY GSL D++ + +DE + + L+AL++ H V
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK +N+LL D ++KL+DFGF C + S G+ + +PE++
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
Y P + DIWS+G++ M+ G P+
Sbjct: 193 AYGPKV-DIWSLGIMAIEMIEGEPPY 217
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 153
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 204
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 205 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 260
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 11/206 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT + IG G+ TV A +VAI+ ++ Q P K+ + EI V++ K+PN
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPN 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ +L + ++++MEY GSL D++ + +DE + + L+AL++ H V
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK +N+LL D ++KL+DFGF C + S G+ + +PE++
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
Y P + DIWS+G++ M+ G P+
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPY 216
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 137/276 (49%), Gaps = 24/276 (8%)
Query: 24 YTVGKIIGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLP---REIEVVKG 78
Y +IG G + V+ + R+T H V I V+ + P+ L++ RE +++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 79 LK-HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+ HP++I + + E++ ++++ + G LFD + + + E R LLEA+ +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
H +VHRD+K EN+LLD + I+LSDFGF+ C + L E CG+ Y +P
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFS-----CHLEPGEK-LRE-LCGTPGYLAP 268
Query: 198 EILQGIPYAPHLS-----DIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNKVTFPK 249
EIL+ H D+W+ GV+LF ++ G PF +L+ + Q + + P+
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPE 328
Query: 250 QPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKP 285
+ S+ K+LIS +L Q P + AE P
Sbjct: 329 WDDRSSTVKDLISRLL---QVDPEARLTAEQALQHP 361
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 238
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 239 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 294
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 11/206 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT + IG G+ TV A +VAI+ ++ Q P K+ + EI V++ K+PN
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPN 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ +L + ++++MEY GSL D++ + +DE + + L+AL++ H V
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRDIK +N+LL D ++KL+DFGF C + S G+ + +PE++
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPF 229
Y P + DIWS+G++ M+ G P+
Sbjct: 192 AYGPKV-DIWSLGIMAIEMIEGEPPY 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 141/264 (53%), Gaps = 18/264 (6%)
Query: 9 QDDIDRKVTVLESHGYTVGKIIGTGSYATVKLAR--STRHSGDV-AIKIVSK---VQAPP 62
+ ++R + + + +++G G Y V R + ++G + A+K++ K V+
Sbjct: 4 ETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK 63
Query: 63 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI 122
D R I ++ +KHP ++ + A +T ++Y+I+EY G LF + +G E
Sbjct: 64 DTAHTKAERNI--LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 123 RARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADN 182
A + ++ AL + H++G+++RD+K EN++L+ ++KL+DFG C+ + D
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL------CKESIHDG 175
Query: 183 SLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV- 241
+++ FCG+ Y +PEIL + + D WS+G +++ M+ G PF + + + ++
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHNRAV-DWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
Query: 242 QNKVTFPKQPEVSTECKELISNIL 265
+ K+ P P ++ E ++L+ +L
Sbjct: 235 KCKLNLP--PYLTQEARDLLKKLL 256
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ TV R+ H DVA+KI+ + + + +FL RE+ ++K L+HPN++ F+
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVLFMG 101
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ---LLEALQYCHERG--VV 144
A+ + I+ EY GSL+ ++ G +++ RR + + + Y H R +V
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+K NLL+D Y +K+ DFG +R A+ S+ G+ + +PE+L+ P
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL------KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 205 YAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
+ SD++S GV+L+ + + P+ + + +++ V K K+ E+ ++ I
Sbjct: 216 -SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC---KRLEIPRNLNPQVAAI 271
Query: 265 LSPVQT-----RPRLKTIAE 279
+ T RP TI +
Sbjct: 272 IEGCWTNEPWKRPSFATIMD 291
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 212
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 213 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 268
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 238
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 239 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 294
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 210
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 211 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 266
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D IK++DFG A+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y +G+I+G G + V LAR R DVA+K++ + + P + +F RE + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 83 NLIRFLQAIETTHRV----YIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
++ E YI+MEY + +L DI+ +G + RA +AL +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC--GSYAYAS 196
H+ G++HRD+K N+++ + +K+ DFG ARA + NS+++T G+ Y S
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLS 187
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PE +G SD++S+G VL+ ++ G PF S + + Q + P
Sbjct: 188 PEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGL 246
Query: 257 CKELISNILSPVQTRP--RLKTIAEDR 281
+L + +L + P R +T AE R
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 210
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 211 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 18/253 (7%)
Query: 24 YTVGKIIGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
Y + ++IG G+++ V+ + R T V I V+K + P + L RE + LKH
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSL-FDIIR--GQGYI-DEIRARRWFGQLLEALQY 137
P+++ L+ + +Y++ E+ + L F+I++ G++ E A + Q+LEAL+Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 138 CHERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
CH+ ++HRD+K EN+LL S N +KL DFG A ++ G+ +
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA------IQLGESGLVAGGRVGTPHF 199
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTF-PKQ-PE 252
+PE+++ PY + D+W GV+LF ++ G LPF + ++ K P+Q
Sbjct: 200 MAPEVVKREPYGKPV-DVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 253 VSTECKELISNIL 265
+S K+L+ +L
Sbjct: 259 ISESAKDLVRRML 271
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 11/262 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y G+ +G G +A A K+V K + K+ + EI + K L +P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ F E VY+++E SL ++ + + + E AR + Q ++ +QY H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL L+ D ++K+ DFG A D +T CG+ Y +PE+L
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA------TKIEFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
++ + DIWS+G +L+ ++ G+ PF+ S + E ++ +N+ + P+ ++ LI
Sbjct: 218 GHSFEV-DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIR 274
Query: 263 NILSPVQT-RPRLKTIAEDRWL 283
+L T RP + + D +
Sbjct: 275 RMLHADPTLRPSVAELLTDEFF 296
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+ +GTGS+ V L + A+KI+ K + + E + + + P L++
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL 107
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y+++EYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D IK++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 218
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 219 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D I+++DFGFA+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPEIIISKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 23/260 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ TV R+ H DVA+KI+ + + + +FL RE+ ++K L+HPN++ F+
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVLFMG 101
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ---LLEALQYCHERG--VV 144
A+ + I+ EY GSL+ ++ G +++ RR + + + Y H R +V
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HR++K NLL+D Y +K+ DFG +R A+ S++ G+ + +PE+L+ P
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 205 YAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
+ SD++S GV+L+ + + P+ + + +++ V K K+ E+ ++ I
Sbjct: 216 -SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC---KRLEIPRNLNPQVAAI 271
Query: 265 LSPVQT-----RPRLKTIAE 279
+ T RP TI +
Sbjct: 272 IEGCWTNEPWKRPSFATIMD 291
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRH--SGDV-AIKIVSKVQAP-PDYLKKFLPREIEVVKGL 79
+ + K++G GS+ V L R SG + A+K++ K D ++ + R+I + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI--LADV 87
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
HP +++ A +T ++Y+I+++ G LF + + E + + +L L + H
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
G+++RD+K EN+LLD + +IKL+DFG ++ + A +FCG+ Y +PE+
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY------SFCGTVEYMAPEV 201
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECK 258
+ ++ H +D WS GV++F M+ G LPF E + + + K+ P+ +STE +
Sbjct: 202 VNRQGHS-HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF--LSTEAQ 258
Query: 259 ELISNIL 265
L+ +
Sbjct: 259 SLLRALF 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y +G+I+G G + V LAR R DVA+K++ + + P + +F RE + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 83 NLIRFLQAIETTHRV----YIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
++ E YI+MEY + +L DI+ +G + RA +AL +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC--GSYAYAS 196
H+ G++HRD+K N+++ + +K+ DFG ARA + NS+++T G+ Y S
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLS 187
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQNKVTFPKQPEVST 255
PE +G SD++S+G VL+ ++ G PF DS V+ + V+ P P
Sbjct: 188 PEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARH 243
Query: 256 E--CKELISNILSPVQTRP--RLKTIAEDR 281
E +L + +L + P R +T AE R
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 120/239 (50%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEYA G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENL++D I+++DFG A+ R + + CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAK---RVKGR------TWXLCGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y +G+I+G G + V LAR R DVA+K++ + + P + +F RE + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 83 NLIRFLQAIETTHRV----YIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
++ E YI+MEY + +L DI+ +G + RA +AL +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC--GSYAYAS 196
H+ G++HRD+K N+L+ + +K+ DFG ARA + NS+ +T G+ Y S
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDFGIARAIAD-----SGNSVXQTAAVIGTAQYLS 187
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQNKVTFPKQPEVST 255
PE +G SD++S+G VL+ ++ G PF DS V+ + V+ P P
Sbjct: 188 PEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARH 243
Query: 256 E--CKELISNILSPVQTRP--RLKTIAEDR 281
E +L + +L + P R +T AE R
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ Y +P I+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEYLAPAIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 10/201 (4%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+GKI G GSY V R+ VAIK + + P +KK REI ++K LKHPNL+
Sbjct: 8 IGKI-GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP-VIKKIALREIRMLKQLKHPNLV 65
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVH 145
L+ R++++ EY ++ L ++ R Q + E + Q L+A+ +CH+ +H
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG-IP 204
RD+K EN+L+ IKL DFGFAR + S+ D+ ++ + Y SPE+L G
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARL-LTGPSDYYDDEVATRW-----YRSPELLVGDTQ 179
Query: 205 YAPHLSDIWSMGVVLFAMVFG 225
Y P + D+W++G V ++ G
Sbjct: 180 YGPPV-DVWAIGCVFAELLSG 199
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y +G+I+G G + V LAR R DVA+K++ + + P + +F RE + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 83 NLIRFLQAIETTHRV----YIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
++ E YI+MEY + +L DI+ +G + RA +AL +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC--GSYAYAS 196
H+ G++HRD+K N+++ + +K+ DFG ARA + NS+++T G+ Y S
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLS 187
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQNKVTFPKQPEVST 255
PE +G SD++S+G VL+ ++ G PF DS V+ + V+ P P
Sbjct: 188 PEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARH 243
Query: 256 E--CKELISNILSPVQTRP--RLKTIAEDR 281
E +L + +L + P R +T AE R
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y +G+I+G G + V LAR R DVA+K++ + + P + +F RE + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 83 NLIRFLQAIETTHRV----YIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
++ E YI+MEY + +L DI+ +G + RA +AL +
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC--GSYAYAS 196
H+ G++HRD+K N+++ + +K+ DFG ARA + NS+++T G+ Y S
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLS 187
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQNKVTFPKQPEVST 255
PE +G SD++S+G VL+ ++ G PF DS V+ + V+ P P
Sbjct: 188 PEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARH 243
Query: 256 E--CKELISNILSPVQTRP--RLKTIAEDR 281
E +L + +L + P R +T AE R
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 19/249 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVS--KVQAPPDYLKKFLPREIEVVKGLKH 81
Y + ++IG+G+ A V+ A VAIK ++ K Q D L K EI+ + H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK----EIQAMSQCHH 72
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--------GQGYIDEIRARRWFGQLLE 133
PN++ + + ++++M+ GS+ DII+ G +DE ++LE
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
L+Y H+ G +HRD+K N+LL D +++++DFG + A + + N + +TF G+
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRKTFVGTPC 191
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPE 252
+ +PE+++ + +DIWS G+ + G P+ + L+ +QN P E
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND---PPSLE 248
Query: 253 VSTECKELI 261
+ KE++
Sbjct: 249 TGVQDKEML 257
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 19/249 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVS--KVQAPPDYLKKFLPREIEVVKGLKH 81
Y + ++IG+G+ A V+ A VAIK ++ K Q D L K EI+ + H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK----EIQAMSQCHH 67
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--------GQGYIDEIRARRWFGQLLE 133
PN++ + + ++++M+ GS+ DII+ G +DE ++LE
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
L+Y H+ G +HRD+K N+LL D +++++DFG + A + + N + +TF G+
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRKTFVGTPC 186
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPE 252
+ +PE+++ + +DIWS G+ + G P+ + L+ +QN P E
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND---PPSLE 243
Query: 253 VSTECKELI 261
+ KE++
Sbjct: 244 TGVQDKEML 252
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 135/272 (49%), Gaps = 26/272 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV-SKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y +G+I+G G + V LAR R DVA+K++ + + P + +F RE + L HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 89
Query: 83 NLIRFLQAIETTHRV----YIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
++ E YI+MEY + +L DI+ +G + RA +AL +
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 149
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAAD--NSLSET--FCGSYAY 194
H+ G++HRD+K N+++ + +K+ DFG ARA AD NS+++T G+ Y
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDFGIARA-------IADSGNSVTQTAAVIGTAQY 202
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQNKVTFPKQPEV 253
SPE +G SD++S+G VL+ ++ G PF DS V+ + V+ P P
Sbjct: 203 LSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED---PIPPSA 258
Query: 254 STE--CKELISNILSPVQTRP--RLKTIAEDR 281
E +L + +L + P R +T AE R
Sbjct: 259 RHEGLSADLDAVVLKALAKNPENRYQTAAEMR 290
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y G+ +G G +A A K+V K + K+ + EI + K L +P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ F E VY+++E SL ++ + + + E AR + Q ++ +QY H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL L+ D ++K+ DFG A D + CG+ Y +PE+L
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA------TKIEFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
++ + DIWS+G +L+ ++ G+ PF+ S + E ++ +N+ + P+ ++ LI
Sbjct: 218 GHSFEV-DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIR 274
Query: 263 NILSPVQT-RPRLKTIAEDRWL 283
+L T RP + + D +
Sbjct: 275 RMLHADPTLRPSVAELLTDEFF 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y G+ +G G +A A K+V K + K+ + EI + K L +P+
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ F E VY+++E SL ++ + + + E AR + Q ++ +QY H V
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 147
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL L+ D ++K+ DFG A D + CG+ Y +PE+L
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA------TKIEFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
++ + DIWS+G +L+ ++ G+ PF+ S + E ++ +N+ + P+ ++ LI
Sbjct: 202 GHSFEV-DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIR 258
Query: 263 NILSPVQT-RPRLKTIAEDRWL 283
+L T RP + + D +
Sbjct: 259 RMLHADPTLRPSVAELLTDEFF 280
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 28/281 (9%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGL 79
S GY V + IG GSY+ K + + A+K++ K + P EIE++ +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS-------EEIEILLRYG 78
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN+I + VY++ E G L D I Q + E A + + ++Y H
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 140 ERGVVHRDIKCENLL-LDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
+GVVHRD+K N+L +D N +++ DFGFA+ +R A+N L T C + +
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLR-----AENGLLMTPCYTANFV 192
Query: 196 SPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS---SVNELLKQV-QNKVTFP--K 249
+PE+L+ Y DIWS+G++L+ M+ G PF + + E+L ++ K T
Sbjct: 193 APEVLKRQGYDEG-CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN 251
Query: 250 QPEVSTECKELISNIL--SPVQTRPRLKTIAEDRWLKPKPK 288
VS K+L+S +L P Q R K + + W+ K K
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPWVTQKDK 291
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y G+ +G G +A A K+V K + K+ + EI + K L +P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ F E VY+++E SL ++ + + + E AR + Q ++ +QY H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL L+ D ++K+ DFG A D + CG+ Y +PE+L
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA------TKIEFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPKQPEVSTECKELIS 262
++ + DIWS+G +L+ ++ G+ PF+ S + E ++ +N+ + P+ ++ LI
Sbjct: 218 GHSFEV-DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIR 274
Query: 263 NILSPVQT-RPRLKTIAEDRWL 283
+L T RP + + D +
Sbjct: 275 RMLHADPTLRPSVAELLTDEFF 296
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 129/254 (50%), Gaps = 25/254 (9%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKH 81
GY V + IG GSY+ K + + A+KI+ K + P EIE++ + +H
Sbjct: 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT-------EEIEILLRYGQH 75
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
PN+I + VY++ E + G L D I Q + E A + + ++Y H +
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 142 GVVHRDIKCENLL-LDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
GVVHRD+K N+L +D N I++ DFGFA+ +R A+N L T C + + +P
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLR-----AENGLLMTPCYTANFVAP 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQVQN---KVTFPKQP 251
E+L+ Y DIWS+GV+L+ M+ G PF D + E+L ++ + ++
Sbjct: 190 EVLERQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN 248
Query: 252 EVSTECKELISNIL 265
VS K+L+S +L
Sbjct: 249 SVSDTAKDLVSKML 262
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + G+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLAGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + CG+ +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLCGTPEALAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 28/281 (9%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGL 79
S GY V + IG GSY+ K + + A+K++ K + P EIE++ +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS-------EEIEILLRYG 78
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+HPN+I + VY++ E G L D I Q + E A + + ++Y H
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 140 ERGVVHRDIKCENLL-LDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
+GVVHRD+K N+L +D N +++ DFGFA+ +R A+N L T C + +
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLR-----AENGLLMTPCYTANFV 192
Query: 196 SPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS---SVNELLKQV-QNKVTFP--K 249
+PE+L+ Y DIWS+G++L+ M+ G PF + + E+L ++ K T
Sbjct: 193 APEVLKRQGYDEG-CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN 251
Query: 250 QPEVSTECKELISNILSPVQTRPRL--KTIAEDRWLKPKPK 288
VS K+L+S +L V RL K + + W+ K K
Sbjct: 252 WNTVSETAKDLVSKMLH-VDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 140/297 (47%), Gaps = 40/297 (13%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF- 87
++G G++ V AR+ S AIK K++ + L L E+ ++ L H ++R+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLSTILS-EVMLLASLNHQYVVRYY 68
Query: 88 ------------LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRW--FGQLLE 133
+ A++ ++I MEY ENG+L+D+I + +++ R W F Q+LE
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILE 127
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRS----------NAADNS 183
AL Y H +G++HRD+K N+ +D N+K+ DFG A+ R ++DN
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS--SVNELLKQV 241
S G+ Y + E+L G + D++S+G++ F M++ PF VN L K
Sbjct: 188 TSA--IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR 242
Query: 242 QNKVTFP---KQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKA 295
+ FP ++ E K + I RP +T+ WL K + + +A
Sbjct: 243 SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEA 299
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 7 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 63
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 175
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 230
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 231 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 6 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 62
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 174
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 229
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 230 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 2 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 58
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 170
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 225
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS EC+ LI L+ + RP + I W++
Sbjct: 226 R--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 7 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 63
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 175
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 230
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 231 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 6 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 62
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 174
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 229
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 230 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 5 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 61
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 121
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 173
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 228
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 229 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 7 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 63
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 175
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 230
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 231 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +GTGS+ V L + A+KI+ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + +Y++MEY G +F +R G E AR + Q++ +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K ENLL+D I+++DFGFA+ R + + G+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK---RVKGR------TWXLXGTPEYLAPEIILSKGYNK 217
Query: 208 HLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D W++GV+++ M G P F D + K V KV FP S++ K+L+ N+L
Sbjct: 218 AV-DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLL 273
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 49 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 105
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 217
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 272
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 273 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 21 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 77
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 189
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 244
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 245 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 22 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 78
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 190
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 245
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 246 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 41 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 97
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 98 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 157
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 209
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 264
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 265 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 34 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 90
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 202
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 257
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 258 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 2 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 58
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 170
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 225
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS+EC+ LI L+ + RP + I W++
Sbjct: 226 R--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 29 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 85
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 86 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 197
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 198 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 252
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS EC+ LI L+ + RP + I W++
Sbjct: 253 R--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 35 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 91
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 203
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS+EC+ LI L+ + RP + I W++
Sbjct: 258 Q-RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 34 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 90
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 202
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 256
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS+EC+ LI L+ + RP + I W++
Sbjct: 257 Q-RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 22 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 78
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 190
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 245
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS EC+ LI L+ + RP + I W++
Sbjct: 246 R--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 21 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 77
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 189
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 244
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS EC+ LI L+ + RP + I W++
Sbjct: 245 R--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 49 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 105
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 217
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 272
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS EC+ LI L+ + RP + I W++
Sbjct: 273 R--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 35 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 91
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 203
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS+EC+ LI L+ + RP + I W++
Sbjct: 258 Q-RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 54 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 110
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 111 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 170
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 222
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 277
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
+ VS EC+ LI L+ + RP + I W++
Sbjct: 278 R--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 34 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 90
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 202
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 256
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS+EC+ LI L+ + RP + I W++
Sbjct: 257 Q-RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 2 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 58
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 170
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 224
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS+EC+ LI L+ + RP + I W++
Sbjct: 225 Q-RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 22 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 78
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 190
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +V F +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQVFFRQ 245
Query: 250 QPEVSTECKELISNILS-PVQTRPRLKTIAEDRWLK 284
+ VS EC+ LI L+ RP + I W++
Sbjct: 246 R--VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGY--IDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ L D + I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K ENLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 35 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 91
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 203
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS EC+ LI L+ + RP + I W++
Sbjct: 258 Q-RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 34 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 90
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 202
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 256
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS EC+ LI L+ + RP + I W++
Sbjct: 257 Q-RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 28/276 (10%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP-----PDYLKKFLPREI 73
LES Y VG ++G+G + +V + VAIK V K + P+ + +P E+
Sbjct: 35 LESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEV 91
Query: 74 EVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRARRWFGQ 130
++K + +IR L E +I+E E LFD I +G + E AR +F Q
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSLSETFC 189
+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++ F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTVYTDFD 203
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ +++ F +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFR 257
Query: 250 QPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
Q VS EC+ LI L+ + RP + I W++
Sbjct: 258 Q-RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 25/254 (9%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVV-KGLKH 81
GY V + IG GSY+ K + + A+KI+ K + P EIE++ + +H
Sbjct: 23 GYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPT-------EEIEILLRYGQH 75
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
PN+I + VY++ E + G L D I Q + E A + + ++Y H +
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 142 GVVHRDIKCENLL-LDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
GVVHRD+K N+L +D N I++ DFGFA+ +R A+N L T C + + +P
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLR-----AENGLLXTPCYTANFVAP 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQVQN---KVTFPKQP 251
E+L+ Y DIWS+GV+L+ + G PF D + E+L ++ + ++
Sbjct: 190 EVLERQGYDA-ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN 248
Query: 252 EVSTECKELISNIL 265
VS K+L+S L
Sbjct: 249 SVSDTAKDLVSKXL 262
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 16/245 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAP-PDYLKKFLPREIEVVKGL 79
+ + K++G GS+ V L + S A+K++ K D ++ + R+I V +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EV 83
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
HP +++ A +T ++Y+I+++ G LF + + E + + +L AL + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
G+++RD+K EN+LLD + +IKL+DFG ++ + A +FCG+ Y +PE+
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEV 197
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK--QPEVSTE 256
+ + +D WS GV++F M+ G LPF E + + + K+ P+ PE +
Sbjct: 198 VNRRGHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSL 256
Query: 257 CKELI 261
+ L
Sbjct: 257 LRMLF 261
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 16/245 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAP-PDYLKKFLPREIEVVKGL 79
+ + K++G GS+ V L + S A+K++ K D ++ + R+I V +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EV 83
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
HP +++ A +T ++Y+I+++ G LF + + E + + +L AL + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
G+++RD+K EN+LLD + +IKL+DFG ++ + A +FCG+ Y +PE+
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEV 197
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK--QPEVSTE 256
+ + +D WS GV++F M+ G LPF E + + + K+ P+ PE +
Sbjct: 198 VNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSL 256
Query: 257 CKELI 261
+ L
Sbjct: 257 LRMLF 261
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 16/245 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAP-PDYLKKFLPREIEVVKGL 79
+ + K++G GS+ V L + S A+K++ K D ++ + R+I V +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EV 84
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
HP +++ A +T ++Y+I+++ G LF + + E + + +L AL + H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
G+++RD+K EN+LLD + +IKL+DFG ++ + A +FCG+ Y +PE+
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEV 198
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV-QNKVTFPK--QPEVSTE 256
+ + +D WS GV++F M+ G LPF E + + + K+ P+ PE +
Sbjct: 199 VNRRGHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSL 257
Query: 257 CKELI 261
+ L
Sbjct: 258 LRMLF 262
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 30 IGTGSYATVKLARSTRHSG-DVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
IG GS V LAR +HSG VA+K++ + ++ L E+ +++ +H N++
Sbjct: 53 IGEGSTGIVCLARE-KHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
++ ++++ME+ + G+L DI+ Q ++E + +L+AL Y H +GV+HRDI
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIV-SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K +++LL D +KLSDFGF C + D + G+ + +PE++ YA
Sbjct: 168 KSDSILLTLDGRVKLSDFGF------CAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 209 LSDIWSMGVVLFAMVFGRLP-FDDSSVNEL 237
+ DIWS+G+++ MV G P F DS V +
Sbjct: 222 V-DIWSLGIMVIEMVDGEPPYFSDSPVQAM 250
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K ENLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 182
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 33/293 (11%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK-HPNLIR 86
+++G G+YA V+ A S ++ + A+KI+ K QA + F RE+E + + + N++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEK-QAGHSRSRVF--REVETLYQCQGNKNILE 75
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
++ E R Y++ E + GS+ I+ Q + +E A R + AL + H +G+ HR
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
Query: 147 DIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSE--TFCGSYAYASPEILQ 201
D+K EN+L +S +K+ DF M+ ++ + E T CGS Y +PE+++
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSG-MKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 202 ----GIPYAPHLSDIWSMGVVLFAMVFGRLPF----------DDSSV-----NELLKQVQ 242
+ D+WS+GVVL+ M+ G PF D V N+L + +Q
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 254
Query: 243 -NKVTFPKQ--PEVSTECKELISNIL-SPVQTRPRLKTIAEDRWLKPKPKSRG 291
K FP + +S+E K+LIS +L + R + + W++ + +G
Sbjct: 255 EGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPEKG 307
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K ENLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 131 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 40/297 (13%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF- 87
++G G++ V AR+ S AIK K++ + L L E+ ++ L H ++R+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLSTILS-EVMLLASLNHQYVVRYY 68
Query: 88 ------------LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRW--FGQLLE 133
+ A++ ++I MEY EN +L+D+I + +++ R W F Q+LE
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILE 127
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRS----------NAADNS 183
AL Y H +G++HRD+K N+ +D N+K+ DFG A+ R ++DN
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS--SVNELLKQV 241
S G+ Y + E+L G + D++S+G++ F M++ PF VN L K
Sbjct: 188 TSA--IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR 242
Query: 242 QNKVTFP---KQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKA 295
+ FP ++ E K + I RP +T+ WL K + + +A
Sbjct: 243 SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEA 299
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 90 AIETTHRVYIIMEY--AENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + D G I + + QLL+ L +CH V+HRD
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K ENLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 182
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 90 AIETTHRVYIIMEY--AENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + D G I + + QLL+ L +CH V+HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K ENLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 132 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 184
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + D G I + + QLL+ L +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 180
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGY--IDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + L D + I + + QLL+ L +CH V+HRD
Sbjct: 73 VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 184
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGY--IDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + L D + I + + QLL+ L +CH V+HRD
Sbjct: 72 VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + D G I + + QLL+ L +CH V+HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 184
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLSFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGXKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 180
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 180
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ + D G I + + QLL+ L +CH V+HRD
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 184
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 182
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGXKYY 188
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 29/284 (10%)
Query: 21 SHG----YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV------SKVQAPPDYLKKFLP 70
+HG Y +I+G G + V+ + A+KI+ S L++
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 71 REIEVVKGLK-HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG 129
+E+++++ + HPN+I+ ET +++ + + G LFD + + + E R+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 130 QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
LLE + H+ +VHRD+K EN+LLD D NIKL+DFGF+ C+ + + S C
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPGEKLRS--VC 184
Query: 190 GSYAYASPEILQGIPYAPHLS-----DIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN- 243
G+ +Y +PEI++ H D+WS GV+++ ++ G PF +L+ + +
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 244 --KVTFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKP 285
+ P+ + S K+L+S L +P+ + AE+ P
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLV---VQPQKRYTAEEALAHP 285
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 188
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 182
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 185
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 184
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 180
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 180
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 182
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 184
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ + +G+V ++ + + REI ++K L HPN+++ L
Sbjct: 11 IGEGTYGVVYKARN-KLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 181
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ + +G+V ++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARN-KLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------VVTLWYRAPEILLGCKYY 180
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 183
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 136/287 (47%), Gaps = 23/287 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y +G+ +G+G +A VK R + A K + K Q+ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I E V +I+E G LFD + + + E A + Q+L+ + Y H
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ + H D+K EN +LLD + +IKL DFG A D + G+ + +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-------EIEDGVEFKNIFGTPEFVA 186
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L + V++ E ++
Sbjct: 187 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQ 244
Query: 257 CKELISNILSPV---QTRPRLKTIAE---DRWLKPKPKSRGVDKAEA 297
EL + + + +TR RL TI E W+ P + + + E+
Sbjct: 245 TSELAKDFIRKLLVKETRKRL-TIQEALRHPWITPVDTQQAMVRRES 290
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 29/284 (10%)
Query: 21 SHG----YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV------SKVQAPPDYLKKFLP 70
+HG Y +I+G G + V+ + A+KI+ S L++
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 71 REIEVVKGLK-HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG 129
+E+++++ + HPN+I+ ET +++ + + G LFD + + + E R+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 130 QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
LLE + H+ +VHRD+K EN+LLD D NIKL+DFGF+ C+ + + L E C
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPGEK-LREV-C 184
Query: 190 GSYAYASPEILQGIPYAPHLS-----DIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN- 243
G+ +Y +PEI++ H D+WS GV+++ ++ G PF +L+ + +
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 244 --KVTFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKP 285
+ P+ + S K+L+S L +P+ + AE+ P
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLV---VQPQKRYTAEEALAHP 285
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V AR+ VA+K + ++ + + REI ++K L HPN+++ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T +++Y++ E+ D G I + + QLL+ L +CH V+HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++++ IKL+DFG ARA + R+ + + Y +PEIL G Y
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE-------VVTLWYRAPEILLGCKYY 185
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
DIWS+G + MV R F DS +++L +
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 25/277 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIV------SKVQAPPDYLKKFLPREIEVVK 77
Y +I+G G + V+ + A+KI+ S L++ +E+++++
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 78 GLK-HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
+ HPN+I+ ET +++ + + G LFD + + + E R+ LLE +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
H+ +VHRD+K EN+LLD D NIKL+DFGF+ C+ + + L E CG+ +Y +
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPGEK-LREV-CGTPSYLA 178
Query: 197 PEILQGIPYAPHLS-----DIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFP 248
PEI++ H D+WS GV+++ ++ G PF +L+ + + + P
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP 238
Query: 249 KQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKP 285
+ + S K+L+S L +P+ + AE+ P
Sbjct: 239 EWDDYSDTVKDLVSRFLV---VQPQKRYTAEEALAHP 272
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS V +A + R SG + V K+ ++ L E+ +++ +H N++
Sbjct: 37 IGEGSTGIVCIA-TVRSSGKLVA--VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ ++++ME+ E G+L DI+ +E A +L+AL H +GV+HRDIK
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 152
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHL 209
+++LL D +KLSDFGF C + + + G+ + +PE++ +PY P +
Sbjct: 153 SDSILLTHDGRVKLSDFGF------CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 210 SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
DIWS+G+++ MV G P+ + + +K +++ +
Sbjct: 207 -DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 241
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS V +A + R SG + V K+ ++ L E+ +++ +H N++
Sbjct: 39 IGEGSTGIVCIA-TVRSSGKLVA--VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ ++++ME+ E G+L DI+ +E A +L+AL H +GV+HRDIK
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 154
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHL 209
+++LL D +KLSDFGF C + + + G+ + +PE++ +PY P +
Sbjct: 155 SDSILLTHDGRVKLSDFGF------CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 210 SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
DIWS+G+++ MV G P+ + + +K +++ +
Sbjct: 209 -DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 243
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS V +A + R SG + V K+ ++ L E+ +++ +H N++
Sbjct: 28 IGEGSTGIVCIA-TVRSSGKLVA--VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ ++++ME+ E G+L DI+ +E A +L+AL H +GV+HRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 143
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHL 209
+++LL D +KLSDFGF C + + + G+ + +PE++ +PY P +
Sbjct: 144 SDSILLTHDGRVKLSDFGF------CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 210 SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
DIWS+G+++ MV G P+ + + +K +++ +
Sbjct: 198 -DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS V +A + R SG + V K+ ++ L E+ +++ +H N++
Sbjct: 159 IGEGSTGIVCIA-TVRSSGKLVA--VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ ++++ME+ E G+L DI+ +E A +L+AL H +GV+HRDIK
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 274
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHL 209
+++LL D +KLSDFGF C + + + G+ + +PE++ +PY P +
Sbjct: 275 SDSILLTHDGRVKLSDFGF------CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 210 SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
DIWS+G+++ MV G P+ + + +K +++ +
Sbjct: 329 -DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 363
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G G +A A KIV K + ++ + EI + + L H +++ F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
E V++++E SL ++ + + + E AR + Q++ QY H V+HRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K NL L+ D +K+ DFG A D +T CG+ Y +PE+L ++
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLA------TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQPEVSTECKELISNILSP 267
+ D+WS+G +++ ++ G+ PF+ S + E L+ +N+ + PK ++ LI +L
Sbjct: 198 V-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQT 254
Query: 268 VQT-RPRLKTIAEDRWL 283
T RP + + D +
Sbjct: 255 DPTARPTINELLNDEFF 271
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS V +A + R SG + V K+ ++ L E+ +++ +H N++
Sbjct: 32 IGEGSTGIVCIA-TVRSSGKLVA--VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ ++++ME+ E G+L DI+ +E A +L+AL H +GV+HRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 147
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHL 209
+++LL D +KLSDFGF C + + + G+ + +PE++ +PY P +
Sbjct: 148 SDSILLTHDGRVKLSDFGF------CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 210 SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
DIWS+G+++ MV G P+ + + +K +++ +
Sbjct: 202 -DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 236
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G G +A A KIV K + ++ + EI + + L H +++ F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
E V++++E SL ++ + + + E AR + Q++ QY H V+HRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K NL L+ D +K+ DFG A D +T CG+ Y +PE+L ++
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLA------TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQPEVSTECKELISNILSP 267
+ D+WS+G +++ ++ G+ PF+ S + E L+ +N+ + PK ++ LI +L
Sbjct: 198 V-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQT 254
Query: 268 VQT-RPRLKTIAEDRWL 283
T RP + + D +
Sbjct: 255 DPTARPTINELLNDEFF 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G G +A A KIV K + ++ + EI + + L H +++ F
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
E V++++E SL ++ + + + E AR + Q++ QY H V+HRD+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K NL L+ D +K+ DFG A D +T CG+ Y +PE+L ++
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLA------TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQPEVSTECKELISNILSP 267
+ D+WS+G +++ ++ G+ PF+ S + E L+ +N+ + PK ++ LI +L
Sbjct: 202 V-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQT 258
Query: 268 VQT-RPRLKTIAEDRWL 283
T RP + + D +
Sbjct: 259 DPTARPTINELLNDEFF 275
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS V +A + R SG + V K+ ++ L E+ +++ +H N++
Sbjct: 82 IGEGSTGIVCIA-TVRSSGKLVA--VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ ++++ME+ E G+L DI+ +E A +L+AL H +GV+HRDIK
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 197
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHL 209
+++LL D +KLSDFGF C + + + G+ + +PE++ +PY P +
Sbjct: 198 SDSILLTHDGRVKLSDFGF------CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 210 SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
DIWS+G+++ MV G P+ + + +K +++ +
Sbjct: 252 -DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 286
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 18/253 (7%)
Query: 24 YTVGKIIGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
Y + ++IG G ++ V+ + R T V I V+K + P + L RE + LKH
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSL-FDIIR--GQGYI-DEIRARRWFGQLLEALQY 137
P+++ L+ + +Y++ E+ + L F+I++ G++ E A + Q+LEAL+Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 138 CHERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
CH+ ++HRD+K +LL S N +KL FG A ++ G+ +
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA------IQLGESGLVAGGRVGTPHF 201
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTF-PKQ-PE 252
+PE+++ PY + D+W GV+LF ++ G LPF + ++ K P+Q
Sbjct: 202 MAPEVVKREPYGKPV-DVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 260
Query: 253 VSTECKELISNIL 265
+S K+L+ +L
Sbjct: 261 ISESAKDLVRRML 273
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 18/253 (7%)
Query: 24 YTVGKIIGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
Y + ++IG G ++ V+ + R T V I V+K + P + L RE + LKH
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSL-FDIIR--GQGYI-DEIRARRWFGQLLEALQY 137
P+++ L+ + +Y++ E+ + L F+I++ G++ E A + Q+LEAL+Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 138 CHERGVVHRDIKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
CH+ ++HRD+K +LL S N +KL FG A ++ G+ +
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA------IQLGESGLVAGGRVGTPHF 199
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTF-PKQ-PE 252
+PE+++ PY + D+W GV+LF ++ G LPF + ++ K P+Q
Sbjct: 200 MAPEVVKREPYGKPV-DVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 253 VSTECKELISNIL 265
+S K+L+ +L
Sbjct: 259 ISESAKDLVRRML 271
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 117/217 (53%), Gaps = 13/217 (5%)
Query: 30 IGTGSYATVKLARSTRHSG-DVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
IG GS V +A + +H+G VA+K K+ ++ L E+ +++ H N++
Sbjct: 53 IGEGSTGIVCIA-TEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
+ ++++ME+ E G+L DI+ +E A +L AL Y H +GV+HRDI
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLS-VLRALSYLHNQGVIHRDI 167
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K +++LL SD IKLSDFGF C + + + G+ + +PE++ +PY
Sbjct: 168 KSDSILLTSDGRIKLSDFGF------CAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKV 245
+ DIWS+G+++ M+ G P+ + + ++++++ +
Sbjct: 222 V-DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSL 257
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 136/268 (50%), Gaps = 31/268 (11%)
Query: 19 LESHGYTVG-------KIIGTGSYATVKLAR--STRHSGDV-AIKIVSK---VQAPPDYL 65
L H VG K++GTG+Y V L R S +G + A+K++ K VQ
Sbjct: 44 LTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103
Query: 66 KKFLPREIEVVKGLKH----PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDE 121
R++ L+H P L+ A +T ++++I++Y G LF + + E
Sbjct: 104 HTRTERQV-----LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE 158
Query: 122 IRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAAD 181
+ + G+++ AL++ H+ G+++RDIK EN+LLDS+ ++ L+DFG ++ + A +
Sbjct: 159 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-----ADE 213
Query: 182 NSLSETFCGSYAYASPEILQGIPYAPHLS-DIWSMGVVLFAMVFGRLPFDDSSVNELLKQ 240
+ FCG+ Y +P+I++G + D WS+GV+++ ++ G PF +
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273
Query: 241 VQNKVTFPKQP---EVSTECKELISNIL 265
+ ++ + P E+S K+LI +L
Sbjct: 274 ISRRILKSEPPYPQEMSALAKDLIQRLL 301
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 15 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 70
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR-----ARRWFGQLLEALQYCH 139
+ F+ T ++ I+ ++ E SL+ + E++ AR Q + Y H
Sbjct: 71 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGMDYLH 125
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+ ++HRD+K N+ L D +K+ DFG A +S + + E GS + +PE+
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 200 LQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPEVSTE 256
++ P+ SD+++ G+VL+ ++ G+LP+ + ++ +++++ V P +V +
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 241
Query: 257 CKELISNILSPVQTRPR 273
C + + +++ + R
Sbjct: 242 CPKRMKRLMAECLKKKR 258
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 27 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 82
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR-----ARRWFGQLLEALQYCH 139
+ F+ T ++ I+ ++ E SL+ + E++ AR Q + Y H
Sbjct: 83 LLFM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGMDYLH 137
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+ ++HRD+K N+ L D +K+ DFG A +S + + E GS + +PE+
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEV 193
Query: 200 LQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPEVSTE 256
++ P+ SD+++ G+VL+ ++ G+LP+ + ++ +++++ V P +V +
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 257 CKELISNILSPVQTRPR 273
C + + +++ + R
Sbjct: 254 CPKRMKRLMAECLKKKR 270
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 27 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 82
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR-----ARRWFGQLLEALQYCH 139
+ F+ T ++ I+ ++ E SL+ + E++ AR Q + Y H
Sbjct: 83 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGMDYLH 137
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+ ++HRD+K N+ L D +K+ DFG A +S + + E GS + +PE+
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEV 193
Query: 200 LQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPEVSTE 256
++ P+ SD+++ G+VL+ ++ G+LP+ + ++ +++++ V P +V +
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 257 CKELISNILSPVQTRPR 273
C + + +++ + R
Sbjct: 254 CPKRMKRLMAECLKKKR 270
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 22/280 (7%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREI 73
+++E H Y +G+ +G+G +A V+ R + A K + K + ++ + RE+
Sbjct: 1 SMVEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 59
Query: 74 EVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE 133
+++ ++HPN+I E V +I+E G LFD + + + E A ++ Q+L+
Sbjct: 60 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 134 ALQYCHERGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFC 189
+ Y H + + H D+K EN +LLD + IKL DFG A A N F
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA------HKIEAGNEFKNIF- 172
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ + +PEI+ P +D+WS+GV+ + ++ G PF + E L + + V +
Sbjct: 173 GTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGETKQETLTNI-SAVNYDF 230
Query: 250 QPEVSTECKELISNILSP--VQTRPRLKTIA---EDRWLK 284
E + EL + + V+ R TIA E W+K
Sbjct: 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 39 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 94
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 95 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 144
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 145 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILW 200
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 261 KVRSNCPKAMKRLMAECLKKKR 282
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 11 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 66
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 67 LLFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 116
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILW 172
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKR 254
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 38 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 93
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 94 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 143
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 144 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILW 199
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 259
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 260 KVRSNCPKAMKRLMAECLKKKR 281
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYL-KKFLPREIEVVKGLKHPNLIRF 87
++G GSY V R+ VAIK +++ D + KK REI+++K L+H NL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIK--KFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
L+ + R Y++ E+ ++ L D+ +D +++ Q++ + +CH ++HRD
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRD 149
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
IK EN+L+ +KL DFGFA R+ AA + + + Y +PE+L G
Sbjct: 150 IKPENILVSQSGVVKLCDFGFA------RTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 208 HLSDIWSMGVVLFAMVFGRLPF-DDSSVNEL 237
D+W++G ++ M G F DS +++L
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 39 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 94
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 95 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 144
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 145 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILW 200
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 261 KVRSNCPKAMKRLMAECLKKKR 282
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G G +A A KIV K + ++ + EI + + L H +++ F
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
E V++++E SL ++ + + + E AR + Q++ QY H V+HRD+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K NL L+ D +K+ DFG A D + CG+ Y +PE+L ++
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLA------TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQPEVSTECKELISNILSP 267
+ D+WS+G +++ ++ G+ PF+ S + E L+ +N+ + PK ++ LI +L
Sbjct: 196 V-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQT 252
Query: 268 VQT-RPRLKTIAEDRWL 283
T RP + + D +
Sbjct: 253 DPTARPTINELLNDEFF 269
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 16 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 71
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 72 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 121
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILW 177
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKR 259
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 16 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 71
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 72 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 121
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILW 177
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKR 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G G +A A KIV K + ++ + EI + + L H +++ F
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
E V++++E SL ++ + + + E AR + Q++ QY H V+HRD+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K NL L+ D +K+ DFG A D + CG+ Y +PE+L ++
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLA------TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQPEVSTECKELISNILSP 267
+ D+WS+G +++ ++ G+ PF+ S + E L+ +N+ + PK ++ LI +L
Sbjct: 220 V-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQT 276
Query: 268 VQT-RPRLKTIAEDRWL 283
T RP + + D +
Sbjct: 277 DPTARPTINELLNDEFF 293
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 13 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 68
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 69 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 118
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 119 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILW 174
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 234
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 235 KVRSNCPKAMKRLMAECLKKKR 256
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G G +A A KIV K + ++ + EI + + L H +++ F
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
E V++++E SL ++ + + + E AR + Q++ QY H V+HRD+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K NL L+ D +K+ DFG A D + CG+ Y +PE+L ++
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLA------TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNE-LLKQVQNKVTFPKQPEVSTECKELISNILSP 267
+ D+WS+G +++ ++ G+ PF+ S + E L+ +N+ + PK ++ LI +L
Sbjct: 222 V-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQT 278
Query: 268 VQT-RPRLKTIAEDRWL 283
T RP + + D +
Sbjct: 279 DPTARPTINELLNDEFF 295
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 31 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 86
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 87 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 136
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 137 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILW 192
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 252
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 253 KVRSNCPKAMKRLMAECLKKKR 274
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 11 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 66
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 67 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 116
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILW 172
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKR 254
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 141/272 (51%), Gaps = 17/272 (6%)
Query: 24 YTVGKIIGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
Y +G ++G GSY VK L T V I K++ P+ + + +EI++++ L+H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNG-EANVKKEIQLLRRLRH 65
Query: 82 PNLIRFLQAI--ETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
N+I+ + + E ++Y++MEY G + D + + + +A +F QL++ L+Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF-PVCQAHGYFCQLIDGLEY 124
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
H +G+VH+DIK NLLL + +K+S G A A AAD++ T GS A+ P
Sbjct: 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA---LHPFAADDT-CRTSQGSPAFQPP 180
Query: 198 EILQGI-PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
EI G+ ++ DIWS GV L+ + G PF+ ++ +L + + K ++ +
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI-GKGSYAIPGDCGPP 239
Query: 257 CKELISNIL--SPVQTRPRLKTIAEDRWLKPK 286
+L+ +L P + R ++ I + W + K
Sbjct: 240 LSDLLKGMLEYEPAK-RFSIRQIRQHSWFRKK 270
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIV----SKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++G G+Y V R + +AIK + S+ P L EI + K LKH N+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-------LHEEIALHKHLKHKNI 81
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR---GQGYIDEIRARRWFGQLLEALQYCHER 141
+++L + + I ME GSL ++R G +E + Q+LE L+Y H+
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 142 GVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
+VHRDIK +N+L+++ + K+SDFG ++ A N +ETF G+ Y +PEI+
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL------AGINPCTETFTGTLQYMAPEII 195
Query: 201 QGIPYA-PHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPE-VSTEC 257
P +DIWS+G + M G+ PF + + +V P+ PE +S E
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA 255
Query: 258 KELISNILSP 267
K I P
Sbjct: 256 KAFILKCFEP 265
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 31/262 (11%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
TVG+ IG+GS+ TV + GDVA+K+++ P L+ F E+ V++ +H N+
Sbjct: 11 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNI 66
Query: 85 IRFLQAIETTHRVYIIMEYAENGSL----------FDIIRGQGYIDEIRARRWFGQLLEA 134
+ F+ T ++ I+ ++ E SL F++I+ ID R Q +
Sbjct: 67 LLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIAR------QTAQG 116
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
+ Y H + ++HRD+K N+ L D +K+ DFG A +S + + E GS +
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILW 172
Query: 195 ASPEILQGIPYAPH--LSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQP 251
+PE+++ P+ SD+++ G+VL+ ++ G+LP+ + ++ ++++ V P
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 252 EVSTECKELISNILSPVQTRPR 273
+V + C + + +++ + R
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKR 254
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIV----SKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++G G+Y V R + +AIK + S+ P L EI + K LKH N+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-------LHEEIALHKHLKHKNI 67
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR---GQGYIDEIRARRWFGQLLEALQYCHER 141
+++L + + I ME GSL ++R G +E + Q+LE L+Y H+
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 142 GVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
+VHRDIK +N+L+++ + K+SDFG + + A N +ETF G+ Y +PEI+
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTS------KRLAGINPCTETFTGTLQYMAPEII 181
Query: 201 QGIPYA-PHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPE-VSTEC 257
P +DIWS+G + M G+ PF + + +V P+ PE +S E
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA 241
Query: 258 KELISNILSP 267
K I P
Sbjct: 242 KAFILKCFEP 251
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 21/289 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ A+ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPAFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKAEAELD 300
L + + + + P+ + +D W+KPK + + + + ++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 18/264 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
L + + K+IG G++ V + + A+KI++K + E +V+
Sbjct: 71 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN 130
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQY 137
+ A + + +Y++M+Y G L ++ + + + E AR + G+++ A+
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSL-SETFCGSYAYAS 196
H+ VHRDIK +N+LLD + +I+L+DFG C D ++ S G+ Y S
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFG------SCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 197 PEILQGI-----PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFP 248
PEILQ + Y P D WS+GV ++ M++G PF S+ E ++ N + FP
Sbjct: 245 PEILQAMEDGMGKYGPE-CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
Query: 249 KQ-PEVSTECKELISNILSPVQTR 271
+VS E K+LI ++ + R
Sbjct: 304 SHVTDVSEEAKDLIQRLICSRERR 327
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 24/293 (8%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK---VQAPPDYLKKFLPREI 73
+++E H Y +G+ +G+G +A V+ R + A K + K + ++ + RE+
Sbjct: 22 SMVEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 74 EVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE 133
+++ ++HPN+I E V +I+E G LFD + + + E A ++ Q+L+
Sbjct: 81 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 140
Query: 134 ALQYCHERGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFC 189
+ Y H + + H D+K EN +LLD + IKL DFG A A N F
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA------HKIEAGNEFKNIF- 193
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
G+ + +PEI+ P +D+WS+GV+ + ++ G PF + E L + + V +
Sbjct: 194 GTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGETKQETLTNI-SAVNYDF 251
Query: 250 QPEVSTECKELISNILSP--VQTRPRLKTIA---EDRWLKP--KPKSRGVDKA 295
E + EL + + V+ R IA E W+K + RG D
Sbjct: 252 DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRNVRGEDSG 304
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 18/264 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
L + + K+IG G++ V + + A+KI++K + E +V+
Sbjct: 87 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN 146
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQY 137
+ A + + +Y++M+Y G L ++ + + + E AR + G+++ A+
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSL-SETFCGSYAYAS 196
H+ VHRDIK +N+LLD + +I+L+DFG C D ++ S G+ Y S
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADFG------SCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 197 PEILQGI-----PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFP 248
PEILQ + Y P D WS+GV ++ M++G PF S+ E ++ N + FP
Sbjct: 261 PEILQAMEDGMGKYGPE-CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
Query: 249 KQ-PEVSTECKELISNILSPVQTR 271
+VS E K+LI ++ + R
Sbjct: 320 SHVTDVSEEAKDLIQRLICSRERR 343
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y +G+ +G+G +A VK R + A K + K Q+ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H N+I E V +I+E G LFD + + + E A + Q+L+ + Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ + H D+K EN +LLD + +IKL DFG A D + G+ + +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-------EIEDGVEFKNIFGTPEFVA 186
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L + V++ E ++
Sbjct: 187 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQ 244
Query: 257 CKELISNILSPV---QTRPRLKTIAE---DRWLKPKPKSRGVDKAEA 297
EL + + + +TR RL TI E W+ P + + + E+
Sbjct: 245 TSELAKDFIRKLLVKETRKRL-TIQEALRHPWITPVDNQQAMVRRES 290
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y +G+ +G+G +A VK R + A K + K Q+ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H N+I E V +I+E G LFD + + + E A + Q+L+ + Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ + H D+K EN +LLD + +IKL DFG A D + G+ + +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-------EIEDGVEFKNIFGTPEFVA 186
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L + V++ E ++
Sbjct: 187 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQ 244
Query: 257 CKELISNILSPV---QTRPRLKTIAE---DRWLKPKPKSRGVDKAEA 297
EL + + + +TR RL TI E W+ P + + + E+
Sbjct: 245 TSELAKDFIRKLLVKETRKRL-TIQEALRHPWITPVDNQQAMVRRES 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 22/278 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEV 75
+E H Y +G+ +G+G +A V+ R + A K + K + ++ + RE+ +
Sbjct: 10 VEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
++ ++HPN+I E V +I+E G LFD + + + E A ++ Q+L+ +
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 136 QYCHERGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGS 191
Y H + + H D+K EN +LLD + IKL DFG A A N F G+
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA------HKIEAGNEFKNIF-GT 181
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
+ +PEI+ P +D+WS+GV+ + ++ G PF + E L + + V +
Sbjct: 182 PEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGETKQETLTNI-SAVNYDFDE 239
Query: 252 EVSTECKELISNILSP--VQTRPRLKTIA---EDRWLK 284
E + EL + + V+ R IA E W+K
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y +G+ +G+G +A VK R + A K + K Q+ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H N+I E V +I+E G LFD + + + E A + Q+L+ + Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ + H D+K EN +LLD + +IKL DFG A D + G+ + +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-------EIEDGVEFKNIFGTPEFVA 186
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L + + V++ E +
Sbjct: 187 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITS-VSYDFDEEFFSH 244
Query: 257 CKELISNILSPV---QTRPRLKTIAE---DRWLKPKPKSRGVDKAEA 297
EL + + + +TR RL TI E W+ P + + + E+
Sbjct: 245 TSELAKDFIRKLLVKETRKRL-TIQEALRHPWITPVDNQQAMVRRES 290
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 184
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 185 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 242
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKA 295
L + + + + P+ + +D W+KPK + + A
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 286
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y +G+ +G+G +A VK R + A K + K Q+ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H N+I E V +I+E G LFD + + + E A + Q+L+ + Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ + H D+K EN +LLD + +IKL DFG A D + G+ + +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-------EIEDGVEFKNIFGTPEFVA 186
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L + + V++ E +
Sbjct: 187 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITS-VSYDFDEEFFSH 244
Query: 257 CKELISNILSPV---QTRPRLKTIAE---DRWLKPKPKSRGVDKAEA 297
EL + + + +TR RL TI E W+ P + + + E+
Sbjct: 245 TSELAKDFIRKLLVKETRKRL-TIQEALRHPWITPVDNQQAMVRRES 290
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 184
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 185 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 242
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKA 295
L + + + + P+ + +D W+KPK + + A
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 286
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKA 295
L + + + + P+ + +D W+KPK + + A
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKA 295
L + + + + P+ + +D W+KPK + + A
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 23/275 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y +G+ +G+G +A VK R + A K + K Q+ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
H N+I E V +I+E G LFD + + + E A + Q+L+ + Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ + H D+K EN +LLD + +IKL DFG A D + G+ + +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-------EIEDGVEFKNIFGTPEFVA 186
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L + + V++ E +
Sbjct: 187 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITS-VSYDFDEEFFSH 244
Query: 257 CKELISNILSPV---QTRPRLKTIAE---DRWLKP 285
EL + + + +TR RL TI E W+ P
Sbjct: 245 TSELAKDFIRKLLVKETRKRL-TIQEALRHPWITP 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 21/286 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
L + + K+IG G++ V + + A+KI++K + E +V+
Sbjct: 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN 130
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQY 137
+ A + + +Y++M+Y G L ++ + + + E AR + +++ A+
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDS 190
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSL-SETFCGSYAYAS 196
H+ VHRDIK +N+L+D + +I+L+DFG C D ++ S G+ Y S
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFG------SCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 197 PEILQGIP-----YAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFP 248
PEILQ + Y P D WS+GV ++ M++G PF S+ E ++ N + FP
Sbjct: 245 PEILQAMEGGKGRYGPE-CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
Query: 249 KQ-PEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSRGVD 293
Q +VS K+LI ++ + R I + K P G+D
Sbjct: 304 TQVTDVSENAKDLIRRLICSREHRLGQNGIED---FKKHPFFSGID 346
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 21/283 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDK 294
L + + + + P+ + +D W+KPK + + +
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 21/283 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDK 294
L + + + + P+ + +D W+KPK + + +
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 20/221 (9%)
Query: 69 LPREIEVVKGLK--HPNLIRFLQAIETTHRVYIIMEYAEN-GSLFDIIRGQGYIDEIRAR 125
+P E+ ++K + +IR L E +I+E E LFD I +G + E AR
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSL 184
+F Q+LEA+++CH GV+HRDIK EN+L+D + +KL DFG +++
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--------SGALLKDTV 212
Query: 185 SETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNK 244
F G+ Y+ PE ++ Y + +WS+G++L+ MV G +PF+ + ++ +
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRGQ 267
Query: 245 VTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAEDRWLK 284
V F ++ VS+EC+ LI L+ + RP + I W++
Sbjct: 268 VFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 21/283 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDK 294
L + + + + P+ + +D W+KPK + + +
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 21/283 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDK 294
L + + + + P+ + +D W+KPK + + +
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKA 295
L + + + + P+ + +D W+KPK + + A
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 21/275 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPK 286
L + + + + P+ + +D W+KPK
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 21/275 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPK 286
L + + + + P+ + +D W+KPK
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 44/299 (14%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
++G G++ V AR+ S AIK K++ + L L E+ ++ L H ++R+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLSTILS-EVXLLASLNHQYVVRYY 68
Query: 89 -------------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRW--FGQLLE 133
A++ ++I EY EN +L+D+I + +++ R W F Q+LE
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILE 127
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRS----------NAADNS 183
AL Y H +G++HR++K N+ +D N+K+ DFG A+ R ++DN
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS--VNELLKQV 241
S G+ Y + E+L G + D +S+G++ F ++ PF VN L K
Sbjct: 188 TSA--IGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLR 242
Query: 242 QNKVTFPKQPEVSTECKELISNILSPV-----QTRPRLKTIAEDRWLKPKPKSRGVDKA 295
+ FP P+ ++ I+ + RP +T+ WL K + + +A
Sbjct: 243 SVSIEFP--PDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEA 299
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 21/251 (8%)
Query: 24 YTVGK--IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
YTV K I+G G + V T +A KI+ K + D K+ + EI V+ L H
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKD--KEEVKNEISVMNQLDH 145
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGY-IDEIRARRWFGQLLEALQYCHE 140
NLI+ A E+ + + ++MEY + G LFD I + Y + E+ + Q+ E +++ H+
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 141 RGVVHRDIKCENLL-LDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
++H D+K EN+L ++ D IK+ DFG AR + + R N G+ + +PE
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLKVN------FGTPEFLAPE 258
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF----DDSSVNELLKQVQNKVTFPKQPEVS 254
++ + +D+WS+GV+ + ++ G PF D ++N +L + + + ++S
Sbjct: 259 VVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL-ACRWDLEDEEFQDIS 316
Query: 255 TECKELISNIL 265
E KE IS +L
Sbjct: 317 EEAKEFISKLL 327
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 21/284 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKPKPKSRGVDKA 295
L + + + + P+ + +D W+KPK + + A
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 25/232 (10%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIV---SKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
+G G+YATV + VA+K V S+ P + REI ++K LKH N++R
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-----REISLMKELKHENIVR 67
Query: 87 FLQAIETTHRVYIIMEYAENG--------SLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
I T +++ ++ E+ +N ++ + RG ++ ++ +W QLL+ L +C
Sbjct: 68 LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLE-LNLVKYFQW--QLLQGLAFC 124
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
HE ++HRD+K +NLL++ +KL DFG ARA N+ S + Y +P+
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-----GIPVNTFSSEVV-TLWYRAPD 178
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQ 250
+L G DIWS G +L M+ G+ F ++ E LK + + + P +
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 22/264 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P ++ + RE++V+ P ++ F
Sbjct: 33 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 151 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 202
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSS----VNELLKQVQNKVTFPKQPE--VSTECKELIS 262
SDIWSMG+ L M GR P S + ELL + N+ PK P S E ++ ++
Sbjct: 203 -SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVN 260
Query: 263 NIL--SPVQTRPRLKTIAEDRWLK 284
L +P + R LK + ++K
Sbjct: 261 KCLIKNPAE-RADLKQLMVHAFIK 283
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + + +GTG++ V + A K V P + K+ + +EI+ + L+HP
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPT 109
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEALQYCHERG 142
L+ A E + + +I E+ G LF+ + + + E A + Q+ + L + HE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 143 VVHRDIKCENLLLDSDYN--IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VH D+K EN++ + + +KL DFG AH+ + + + G+ +A+PE+
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSV------KVTTGTAEFAAPEVA 222
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFPKQPEVSTEC 257
+G P + +D+WS+GV+ + ++ G PF + +E L+ V++ + +S +
Sbjct: 223 EGKPVG-YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 281
Query: 258 KELISN-ILSPVQTRPRLKTIAEDRWLKP 285
K+ I +L+ TR + E WL P
Sbjct: 282 KDFIRKLLLADPNTRMTIHQALEHPWLTP 310
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 18/260 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 17 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 74
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S + ++ F G+ +Y SPE LQG Y+
Sbjct: 135 KPSNILVNSRGEIKLCDFGV--------SGQLIDEMANEFVGTRSYMSPERLQGTHYSVQ 186
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV--STECKELISNIL- 265
SDIWSMG+ L M GR P ++ ELL + N+ PK P S E ++ ++ L
Sbjct: 187 -SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQDFVNKCLI 244
Query: 266 -SPVQTRPRLKTIAEDRWLK 284
+P + R LK + ++K
Sbjct: 245 KNPAE-RADLKQLMVHAFIK 263
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
+ + K IG G ++ V A VA+K V + +EI+++K L HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLEALQYC 138
N+I++ + + + I++E A+ G L +I+ + I E ++F QL AL++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H R V+HRDIK N+ + + +KL D G R ++ + + + G+ Y SPE
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF------SSKTTAAHSLVGTPYYMSPE 206
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF--DDSSVNELLKQVQNKVTFPKQP--EVS 254
+ Y SDIWS+G +L+ M + PF D ++ L K+++ + +P P S
Sbjct: 207 RIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYS 264
Query: 255 TECKELISNILSP 267
E ++L++ ++P
Sbjct: 265 EELRQLVNMCINP 277
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + + +GTG++ V + A K V P + K+ + +EI+ + L+HP
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPT 215
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEALQYCHERG 142
L+ A E + + +I E+ G LF+ + + + E A + Q+ + L + HE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 143 VVHRDIKCENLLLDSDYN--IKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
VH D+K EN++ + + +KL DFG AH+ + + + G+ +A+PE+
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSV------KVTTGTAEFAAPEVA 328
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN---KVTFPKQPEVSTEC 257
+G P + +D+WS+GV+ + ++ G PF + +E L+ V++ + +S +
Sbjct: 329 EGKPVG-YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 387
Query: 258 KELISN-ILSPVQTRPRLKTIAEDRWLKP 285
K+ I +L+ TR + E WL P
Sbjct: 388 KDFIRKLLLADPNTRMTIHQALEHPWLTP 416
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 31/304 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIK-IVSKVQAPPDYLKKFLPREIEVVKGLK-H 81
Y + K +G G+Y V + R VA+K I Q D + F REI ++ L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--REIMILTELSGH 68
Query: 82 PNLIRFLQAI--ETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
N++ L + + VY++ +Y E L +IR ++ + + QL++ ++Y H
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH 126
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCR--SNAADNSLSET---------- 187
G++HRD+K N+LL+++ ++K++DFG +R+ + R +N S++E
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 188 ---FCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNK 244
+ + Y +PEIL G D+WS+G +L ++ G+ F SS L+++
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 245 VTFPKQPEV----STECKELISNILSPVQTRPRLKTIAEDRW----LKPKPKSRGVDKAE 296
+ FP +V S K +I ++ V+ R K +W LK PK+ ++A
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEAL 306
Query: 297 AELD 300
LD
Sbjct: 307 DLLD 310
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V A++ + A+K + +++ + + REI ++K LKH N+++
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T R+ ++ E+ + L D+ +G ++ + A+ + QLL + YCH+R V+HRD
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++ + +K++DFG ARA + R + + Y +P++L G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAPDVLMGSKKY 178
Query: 207 PHLSDIWSMGVVLFAMVFG 225
DIWS+G + MV G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 21/274 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD---YLKKFLPREIEVVKGLK 80
Y G+ +G+G +A VK R A K + K + ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
HPN+I + E V +I+E G LFD + + + E A + Q+L + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 141 RGVVHRDIKCEN-LLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
+ H D+K EN +LLD + IK+ DFG AH N N G+ + +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKN-----IFGTPEFVA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
PEI+ P +D+WS+GV+ + ++ G PF + E L V + V + + E +
Sbjct: 186 PEIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSN 243
Query: 257 CKELISNILSPVQTR-PRLKTIAEDR----WLKP 285
L + + + + P+ + +D W+KP
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 54/293 (18%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKV---QAPPDYLKKFLPREIEVVKGLK 80
Y + IG GSY V++A + AIKI++K Q P +++ + E+ ++K L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER-IKTEVRLMKKLH 86
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-------GQGYIDEIRAR-------- 125
HPN+ R + E + ++ME G L D + G+ +D ++ +
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 126 -------------------------RWFGQLLEALQYCHERGVVHRDIKCENLLLDSD-- 158
Q+ AL Y H +G+ HRDIK EN L ++
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 159 YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI--PYAPHLSDIWSMG 216
+ IKL DFG ++ + N + T G+ + +PE+L Y P D WS G
Sbjct: 207 FEIKLVDFGLSKEFYKL--NNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK-CDAWSAG 263
Query: 217 VVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPE---VSTECKELISNILS 266
V+L ++ G +PF + + + QV NK + P +S ++L+SN+L+
Sbjct: 264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLN 316
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V A++ + A+K + +++ + + REI ++K LKH N+++
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T R+ ++ E+ + L D+ +G ++ + A+ + QLL + YCH+R V+HRD
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++ + +K++DFG ARA + R + + Y +P++L G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAPDVLMGSKKY 178
Query: 207 PHLSDIWSMGVVLFAMVFG 225
DIWS+G + MV G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y V A++ + A+K + +++ + + REI ++K LKH N+++
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
I T R+ ++ E+ + L D+ +G ++ + A+ + QLL + YCH+R V+HRD
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
+K +NLL++ + +K++DFG ARA + R + + Y +P++L G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------IVTLWYRAPDVLMGSKKY 178
Query: 207 PHLSDIWSMGVVLFAMVFG 225
DIWS+G + MV G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 26/272 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKF-LPREIEVVKGLKHP 82
Y + + +G+G++ V + +G V V+K P L K+ + EI ++ L HP
Sbjct: 53 YDILEELGSGAFGVVHRC-VEKATGRV---FVAKFINTPYPLDKYTVKNEISIMNQLHHP 108
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGY-IDEIRARRWFGQLLEALQYCHER 141
LI A E + + +I+E+ G LFD I + Y + E + Q E L++ HE
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 142 GVVHRDIKCENLLLDSD--YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+VH DIK EN++ ++ ++K+ DFG A + + + + + +A+PEI
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLA-------TKLNPDEIVKVTTATAEFAAPEI 221
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQVQNKVTFPKQPEVSTE 256
+ P +D+W++GV+ + ++ G PF DD + +K+ + VS E
Sbjct: 222 VDREPVG-FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280
Query: 257 CKELISNILSPVQTRPRLKTIAEDR----WLK 284
K+ I N+L Q PR + D WLK
Sbjct: 281 AKDFIKNLL---QKEPRKRLTVHDALEHPWLK 309
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 37/264 (14%)
Query: 1 MIDSTVQVQDDIDRKVTVLESHG----------YTVGKIIGTGSYATVKLARSTRHSGDV 50
M S V D + TV+ + G YT K+IG GS+ V A+ V
Sbjct: 1 MRGSKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELV 60
Query: 51 AIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIR----FLQAIETTHRVYI--IMEYA 104
AIK V + K+F RE+++++ L H N++R F + E VY+ +++Y
Sbjct: 61 AIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 113
Query: 105 ENGSLFDIIR----GQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYN 160
+++ + R + + I + + QL +L Y H G+ HRDIK +NLLLD D
Sbjct: 114 PE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 172
Query: 161 I-KLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVL 219
+ KL DFG A+ +R N + C Y Y +PE++ G D+WS G VL
Sbjct: 173 VLKLCDFGSAKQLVRGEPNVS------XICSRY-YRAPELIFGATDYTSSIDVWSAGCVL 225
Query: 220 FAMVFGRLPF-DDSSVNELLKQVQ 242
++ G+ F DS V++L++ ++
Sbjct: 226 AELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 76 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 133
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 194 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 245
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L M GR P EL
Sbjct: 246 -SDIWSMGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 108
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSRY 221
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 81
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSR 194
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 195 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 92
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSR 205
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 206 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 86
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSRY 199
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 200 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 41 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 98
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 159 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 210
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L M GR P EL
Sbjct: 211 -SDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 102
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 215
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 216 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 73
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSR 186
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 108
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 221
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 112
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 225
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 226 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 74
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSR 187
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 188 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 110
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 223
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 224 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 73
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSR 186
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + +A F RE+++++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-------FKNRELQIMRKLDHCN 74
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSRY 187
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 79
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 192
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 193 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 86
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSR 199
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 200 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 78
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSRY 191
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 192 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 14 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L M GR P EL
Sbjct: 184 -SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 14 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L M GR P EL
Sbjct: 184 -SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 153
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 266
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 267 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 14 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L M GR P EL
Sbjct: 184 -SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 14 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L M GR P EL
Sbjct: 184 -SDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 73
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSR 186
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 131/268 (48%), Gaps = 24/268 (8%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK----FLPREIE 74
L+ + + K+IG G+++ V + + + A+KI++K D LK+ E +
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW----DMLKRGEVSCFREERD 113
Query: 75 VVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQG-YIDEIRARRWFGQLLE 133
V+ + + A + + +Y++MEY G L ++ G I AR + +++
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
A+ H G VHRDIK +N+LLD +I+L+DFG + ++ R++ SL G+
Sbjct: 174 AIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG---SCLKLRADGTVRSLVAV--GTPD 228
Query: 194 YASPEILQGIPYAPHL------SDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV---QNK 244
Y SPEILQ + P D W++GV + M +G+ PF S E ++ +
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH 288
Query: 245 VTFPKQPE-VSTECKELISNILSPVQTR 271
++ P E V E ++ I +L P +TR
Sbjct: 289 LSLPLVDEGVPEEARDFIQRLLCPPETR 316
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 25/249 (10%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V S + SG V + + ++ P + + RE++V+ P ++ F
Sbjct: 14 LGAGNGGVV-FKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ G I E + +++ L Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y SPE LQG Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 209 LSDIWSMGVVLFAMVFGRLPF------DDS----SVNELLKQVQNKVTFPKQPE--VSTE 256
SDIWSMG+ L M GR P +DS ++ ELL + N+ PK P S E
Sbjct: 184 -SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLE 241
Query: 257 CKELISNIL 265
++ ++ L
Sbjct: 242 FQDFVNKCL 250
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
YT K+IG GS+ V A+ VAIK V + K+F RE+++++ L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHC 73
Query: 83 NLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLL 132
N++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------XICSR 186
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + +A F RE+++++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-------FKNRELQIMRKLDHCN 74
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 187
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT K+IG GS+ V A+ VAIK V + +A F RE+++++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-------FKNRELQIMRKLDHCN 74
Query: 84 LIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
++R F + E VY+ +++Y +++ + R + + I + + QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+L Y H G+ HRDIK +NLLLD D + KL DFG A+ +R N + C Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------YICSRY 187
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVNELLKQVQ 242
Y +PE++ G D+WS G VL ++ G+ F DS V++L++ ++
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIV---SKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
+G G+YATV +S VA+K + + AP + RE+ ++K LKH N++
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-----REVSLLKDLKHANIVT 64
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
I T + ++ EY + + I+ + + QLL L YCH + V+HR
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
D+K +NLL++ +KL+DFG ARA + DN + + Y P+IL G
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAK-SIPTKTYDNEVVTLW-----YRPPDILLGSTDY 178
Query: 207 PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL 238
D+W +G + + M GR F S+V E L
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSK-----VQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+G+Y +V A R VA+K +S+ + A Y RE+ ++K LKH N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 89
Query: 85 IRFLQ------AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
I L +IE VY++ L +I++ Q DE + QLL L+Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDE-HVQFLVYQLLRGLKYI 147
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H G++HRD+K N+ ++ D +++ DFG AR AD ++ + + Y +PE
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--------QADEEMT-GYVATRWYRAPE 198
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
I+ + DIWS+G ++ ++ G+ F S + LK++ V P PEV
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS-PEV 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 18/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y TV A++ VA+K V ++ + + REI ++K LKH N++R
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + ++ ++ E+ + FD G +D + + QLL+ L +CH R V+HRD
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH---MRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
+K +NLL++ + +KL+DFG ARA +RC S + Y P++L G
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV---------VTLWYRPPDVLFGAK 177
Query: 205 YAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQV 241
D+WS G + + P F + V++ LK++
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRI 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSK-----VQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+G+Y +V A R VA+K +S+ + A Y RE+ ++K LKH N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 89
Query: 85 IRFLQ------AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
I L +IE VY++ L +I++ Q DE + QLL L+Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDE-HVQFLVYQLLRGLKYI 147
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H G++HRD+K N+ ++ D +++ DFG AR AD ++ + + Y +PE
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--------QADEEMT-GYVATRWYRAPE 198
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
I+ + DIWS+G ++ ++ G+ F S + LK++ V P PEV
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS-PEV 252
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSK-----VQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+G+Y +V A R VA+K +S+ + A Y RE+ ++K LKH N+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 81
Query: 85 IRFLQ------AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
I L +IE VY++ L +I++ Q DE + QLL L+Y
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDE-HVQFLVYQLLRGLKYI 139
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H G++HRD+K N+ ++ D +++ DFG AR AD ++ + + Y +PE
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLAR--------QADEEMT-GYVATRWYRAPE 190
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
I+ + DIWS+G ++ ++ G+ F S + LK++ V P PEV
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS-PEV 244
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+GV++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+GV++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 30/267 (11%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG+GS+ TV + GDVA+KI+ V P+ + F E+ V++ +H N++ F+
Sbjct: 44 IGSGSFGTV---YKGKWHGDVAVKILKVVDPTPEQFQAF-RNEVAVLRKTRHVNILLFMG 99
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ-------GYIDEIRARRWFGQLLEALQYCHERG 142
+ T + I+ ++ E SL+ + Q ID R Q + + Y H +
Sbjct: 100 YM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR------QTAQGMDYLHAKN 152
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
++HRD+K N+ L +K+ DFG A +S + + E GS + +PE+++
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA----TVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 203 IPYAP--HLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPKQPEVSTECKE 259
P SD++S G+VL+ ++ G LP+ ++ ++++ V P ++ C +
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268
Query: 260 LISNILSPVQTRPRLKTIAEDRWLKPK 286
+ +++ +K + E+R L P+
Sbjct: 269 AMKRLVADC-----VKKVKEERPLFPQ 290
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 18/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G+Y TV A++ VA+K V ++ + + REI ++K LKH N++R
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 90 AIETTHRVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
+ + ++ ++ E+ + FD G +D + + QLL+ L +CH R V+HRD
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 148 IKCENLLLDSDYNIKLSDFGFARAH---MRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
+K +NLL++ + +KL++FG ARA +RC S + Y P++L G
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV---------VTLWYRPPDVLFGAK 177
Query: 205 YAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQV 241
D+WS G + + GR F + V++ LK++
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 32/265 (12%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK-HPNLIRF 87
++G G++A V+ + S + A+KI+ K P +++ + RE+E++ + H N++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
++ E R Y++ E GS+ I + + +E+ A + AL + H +G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 148 IKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSE--TFCGSYAYASPEILQG 202
+K EN+L + +K+ DFG ++ + + S E T CGS Y +PE+++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSG-IKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 203 IPYAPHL----SDIWSMGVVLFAMVFGRLPF---------------DDSSVNELLKQVQ- 242
+ D+WS+GV+L+ ++ G PF + N L + +Q
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 243 NKVTFPKQ--PEVSTECKELISNIL 265
K FP + +S K+LIS +L
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLL 280
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T+ K +G+G + VKL + + DVA+K++ + D +F +E + + L HP L
Sbjct: 11 TLLKELGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSED---EFF-QEAQTMMKLSHPKL 65
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGY-IDEIRARRWFGQLLEALQYCHERGV 143
++F + +YI+ EY NG L + +R G ++ + + E + +
Sbjct: 66 VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+ N L+D D +K+SDFG R + + +S+ F +++PE+
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVL---DDQYVSSVGTKF--PVKWSAPEVFHYF 180
Query: 204 PYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQV 241
Y+ SD+W+ G++++ + G++P+D + +E++ +V
Sbjct: 181 KYSSK-SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 28/288 (9%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A T +VA+K +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I + +D R
Sbjct: 74 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME--LDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A N +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TACTNFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ YA ++ DIWS+G ++ +V G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYAANV-DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR----WLKPKPKSR 290
P ++ L + + V+ RP+ I + W+ P R
Sbjct: 243 TPSAEFMAA----LQPTVRNYVENRPKYPGIKFEELFPDWIFPSESER 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +G G + V +A +H+ K+ K P + E V+K L+H L++
Sbjct: 194 KKLGAGQFGEVWMATYNKHT-----KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK- 247
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEI-RARRWFGQLLEALQYCHERGVVH 145
L A+ T +YII E+ GSL D ++ +G + + + Q+ E + + +R +H
Sbjct: 248 LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 307
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQGI 203
RD++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARV-------IEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 204 PYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELIS 262
+ SD+WS G++L +V +GR+P+ S E+++ ++ P+ PE C E +
Sbjct: 361 SFTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PE---NCPEELY 415
Query: 263 NIL 265
NI+
Sbjct: 416 NIM 418
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 36/276 (13%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 19 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 75
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 76 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSY 132
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 133 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMV 185
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS-VNELLKQVQNKV 245
F + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + +++ K ++
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE--- 241
Query: 246 TFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 242 ------QLGTPCPEFMKKL------QPTVRTYVENR 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 26 VGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
+ ++IG G + V +L + VAIK + K ++FL E ++ +HP
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFL-SEASIMGQFEHP 75
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHER 141
N+IR + + V I+ E+ ENG+L +R G I+ + ++Y E
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEI 199
VHRD+ N+L++S+ K+SDFG +R N++D + + + G + +PE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRF---LEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 200 LQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
+ + SD WS G+V++ M FG P+ D S +++ ++ P P+ T
Sbjct: 193 IAFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 251
Query: 259 ELISNILSP-VQTRPRLKTI 277
+L+ + RPR +
Sbjct: 252 QLMLDCWQKDRNARPRFPQV 271
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +G G + V +A +H+ K+ K P + E V+K L+H L++
Sbjct: 21 KKLGAGQFGEVWMATYNKHT-----KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK- 74
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEI-RARRWFGQLLEALQYCHERGVVH 145
L A+ T +YII E+ GSL D ++ +G + + + Q+ E + + +R +H
Sbjct: 75 LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 134
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGI 203
RD++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARV-------IEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 204 PYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELIS 262
+ SD+WS G++L +V +GR+P+ S E+++ ++ P+ PE C E +
Sbjct: 188 SFTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PE---NCPEELY 242
Query: 263 NIL 265
NI+
Sbjct: 243 NIM 245
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 28/288 (9%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A T +VA+K +S+ + K+ RE
Sbjct: 15 DSTFTVLKR--YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RE 71
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I + +D R
Sbjct: 72 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME--LDHERMSY 128
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A+ N +
Sbjct: 129 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TASTNFMMT 181
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ +V G + F + + +V ++
Sbjct: 182 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG 240
Query: 247 FPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR----WLKPKPKSR 290
P ++ L + + V+ RP IA + W+ P R
Sbjct: 241 TPSAEFMAA----LQPTVRNYVENRPAYPGIAFEELFPDWIFPSESER 284
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + + IG G+Y V AR VAIK + K+ L RE++++K KH N
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDN 114
Query: 84 LIRFLQAIETT------HRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+I + T VY++++ E+ L II + R + QLL L+Y
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
H V+HRD+K NLL++ + +K+ DFG AR C S A + + Y +P
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG--LCTSPAEHQYFMTEYVATRWYRAP 231
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
E++ + D+WS+G + M+ R F
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
E H T +G GS+ V + + A+K V L+ F E+ GL
Sbjct: 72 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGL 123
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
P ++ A+ V I ME E GSL +I+ G + E RA + GQ LE L+Y H
Sbjct: 124 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH 183
Query: 140 ERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSL--SETFCGSYAYAS 196
R ++H D+K +N+LL SD + L DFG A + + + SL + G+ + +
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHA---LCLQPDGLGKSLLTGDYIPGTETHMA 240
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
PE++ G P + DIWS ++ M+ G P+
Sbjct: 241 PEVVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 272
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
E H T +G GS+ V + + A+K V L+ F E+ GL
Sbjct: 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGL 107
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
P ++ A+ V I ME E GSL +I+ G + E RA + GQ LE L+Y H
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH 167
Query: 140 ERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRCRSNAADNSL--SETFCGSYAYAS 196
R ++H D+K +N+LL SD + L DFG A + + + SL + G+ + +
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHA---LCLQPDGLGKSLLTGDYIPGTETHMA 224
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
PE++ G P + DIWS ++ M+ G P+
Sbjct: 225 PEVVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 256
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + + IG G+Y V AR VAIK + K+ L RE++++K KH N
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDN 115
Query: 84 LIRFLQAIETT------HRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+I + T VY++++ E+ L II + R + QLL L+Y
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
H V+HRD+K NLL++ + +K+ DFG AR C S A + + Y +P
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG--LCTSPAEHQYFMTEYVATRWYRAP 232
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
E++ + D+WS+G + M+ R F
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 57 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 116
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 117 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 170
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+E C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 171 HNSLTEP-CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 228
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 229 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 260
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 14/260 (5%)
Query: 26 VGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
+ ++IG G + V +L + VAIK + K ++FL E ++ +HP
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFL-SEASIMGQFEHP 77
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHER 141
N+IR + + V I+ E+ ENG+L +R G I+ + ++Y E
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEI 199
VHRD+ N+L++S+ K+SDFG +R N++D + + + G + +PE
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRF---LEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 200 LQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
+ + SD WS G+V++ M FG P+ D S +++ ++ P P+ T
Sbjct: 195 IAFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 253
Query: 259 ELISNILSPVQT-RPRLKTI 277
+L+ + + RPR +
Sbjct: 254 QLMLDCWQKDRNARPRFPQV 273
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 11/232 (4%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+Y V A+ ++ VA+K + ++ A + + REI ++K L HPN++ +
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
I + + ++ E+ E + + + + + + + QLL + +CH+ ++HRD+K
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 150 CENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
+NLL++SD +KL+DFG ARA + RS + + Y +P++L G
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHE-------VVTLWYRAPDVLMGSKKYST 199
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
DIWS+G + M+ G+ F + ++ L ++ + + P P + +EL
Sbjct: 200 SVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP-NPREWPQVQEL 250
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 36/276 (13%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS-VNELLKQVQNKV 245
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + +++ K ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE--- 239
Query: 246 TFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 240 ------QLGTPCPEFMKKL------QPTVRTYVENR 263
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 11/232 (4%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+Y V A+ ++ VA+K + ++ A + + REI ++K L HPN++ +
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
I + + ++ E+ E + + + + + + + QLL + +CH+ ++HRD+K
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 150 CENLLLDSDYNIKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
+NLL++SD +KL+DFG ARA + RS + + Y +P++L G
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHE-------VVTLWYRAPDVLMGSKKYST 199
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
DIWS+G + M+ G+ F + ++ L ++ + + P P + +EL
Sbjct: 200 SVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP-NPREWPQVQEL 250
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 36/276 (13%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 18 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 74
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 75 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSY 131
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 184
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS-VNELLKQVQNKV 245
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + +++ K ++
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE--- 240
Query: 246 TFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 241 ------QLGTPCPEFMKKL------QPTVRTYVENR 264
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
E H T +G GS+ V + + A+K V L+ F E+ GL
Sbjct: 70 EVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGL 121
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
P ++ A+ V I ME E GSL +I+ G + E RA + GQ LE L+Y H
Sbjct: 122 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH 181
Query: 140 ERGVVHRDIKCENLLLDSDYN-IKLSDFGFARAHMRC-RSNAADNSL--SETFCGSYAYA 195
R ++H D+K +N+LL SD + L DFG H C + + SL + G+ +
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFG----HALCLQPDGLGKSLLTGDYIPGTETHM 237
Query: 196 SPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+PE++ G P + DIWS ++ M+ G P+
Sbjct: 238 APEVVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 270
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+ V + R SG + + + ++ P + + RE++V+ P ++ F
Sbjct: 24 LGAGNGGVVTKVQH-RPSGLIMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 81
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
A + + I ME+ + GSL +++ I E + +L L Y E+ ++HRD+
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 141
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+L++S IKL DFG S +S++ +F G+ +Y +PE LQG Y+
Sbjct: 142 KPSNILVNSRGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMAPERLQGTHYSVQ 193
Query: 209 LSDIWSMGVVLFAMVFGRLPFDDSSVNEL 237
SDIWSMG+ L + GR P EL
Sbjct: 194 -SDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 243 TP-CPEFMKKLQPTVRNY---VENRPK 265
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE K+L + + V+ RP+
Sbjct: 243 TP-SPEF---MKKLQPTVRTYVENRPK 265
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 57 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 116
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 117 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 170
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 171 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 228
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 229 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 260
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 162
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 163 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 216
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 217 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 274
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 275 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 306
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 172
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 173 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 230
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 231 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 262
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 243 TP-CPEFMKKLQPTVRNY---VENRPK 265
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 109 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 168
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 169 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 222
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 223 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 280
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 281 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 312
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 58 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 117
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 118 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 171
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 172 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 229
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 230 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 261
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 10 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 66
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I+ + +D R
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME--LDHERMSY 123
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 124 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-------AGTSFMMT 176
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 236 TP-CPEFMKKLQPTVRNY---VENRPK 258
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V R VAIKI+ +A + + + +EI V+ + ++
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ +++IIMEY GS D++R G DE + ++L+ L Y H +HRDIK
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS-ETFCGSYAYASPEILQGIPYAPH 208
N+LL ++KL+DFG A D + TF G+ + +PE++Q Y
Sbjct: 148 AANVLLSEQGDVKLADFGVA-------GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 209 LSDIWSMGVVLFAMVFGRLPFDD 231
+DIWS+G+ + G P D
Sbjct: 201 -ADIWSLGITAIELAKGEPPNSD 222
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 73 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 132
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 133 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 186
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 187 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 244
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 245 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 276
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 65 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 124
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 125 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 178
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 179 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 236
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 237 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 268
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 172
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 173 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 230
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 231 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 262
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 63 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 122
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 123 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 176
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 177 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 234
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 235 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 266
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 64 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 123
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 124 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 177
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D+WS+GV+++ ++ G PF +
Sbjct: 178 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 235
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 236 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 267
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 29/241 (12%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +G G + V +A +H+ K+ K P + E V+K L+H L++
Sbjct: 188 KKLGAGQFGEVWMATYNKHT-----KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK- 241
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEI-RARRWFGQLLEALQYCHERGVVH 145
L A+ T +YII E+ GSL D ++ +G + + + Q+ E + + +R +H
Sbjct: 242 LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 301
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD++ N+L+ + K++DFG AR + + +PE + +
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKF---------------PIKWTAPEAINFGSF 346
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L +V +GR+P+ S E+++ ++ P+ PE C E + NI
Sbjct: 347 TIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PE---NCPEELYNI 401
Query: 265 L 265
+
Sbjct: 402 M 402
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ F + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMA-GFVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ F + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMA-GFVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLAQMPKMN 269
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 142
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ F + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMA-GFVATRWYRAPEIMLNW 193
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 254 YIQSLAQMPKMN 265
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 84
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 85 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 201 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 256
Query: 264 IL 265
++
Sbjct: 257 VM 258
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 34/275 (12%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 22 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 78
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 79 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI--QMELDHERMSY 135
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 136 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 188
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ D+WS+G ++ MV ++ F + + Q NKV
Sbjct: 189 PYVVTRYYRAPEVILGMGYKENV-DLWSVGCIMGEMVCHKILFPG---RDYIDQ-WNKVI 243
Query: 247 FPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 244 ----EQLGTPCPEFMKKL------QPTVRTYVENR 268
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 74
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 75 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 191 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 246
Query: 264 IL 265
++
Sbjct: 247 VM 248
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 32/265 (12%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK-HPNLIRF 87
++G G++A V+ + S + A+KI+ K P +++ + RE+E++ + H N++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
++ E R Y++ E GS+ I + + +E+ A + AL + H +G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 148 IKCENLLLDSDYN---IKLSDFGFARAHMRCRSNAADNSLSE--TFCGSYAYASPEILQG 202
+K EN+L + +K+ DF ++ + + S E T CGS Y +PE+++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSG-IKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 203 IPYAPHL----SDIWSMGVVLFAMVFGRLPF---------------DDSSVNELLKQVQ- 242
+ D+WS+GV+L+ ++ G PF + N L + +Q
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 243 NKVTFPKQ--PEVSTECKELISNIL 265
K FP + +S K+LIS +L
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLL 280
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 243 TP-CPEFMKKLQPTVRNY---VENRPK 265
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 21/236 (8%)
Query: 5 TVQVQDDIDRKVTVLESHGYT--------VGKIIGTGSYATVKLARSTRHSGDVAIKIVS 56
TVQ+++ R++ L+ T V + +G GSY +V A VAIK
Sbjct: 4 TVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK--- 60
Query: 57 KVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ 116
Q P + + + +EI +++ P+++++ + ++I+MEY GS+ DIIR +
Sbjct: 61 --QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR 118
Query: 117 G-YIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRC 175
+ E L+ L+Y H +HRDIK N+LL+++ + KL+DFG A
Sbjct: 119 NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGV--AGQLT 176
Query: 176 RSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD 231
A N + G+ + +PE++Q I Y ++DIWS+G+ M G+ P+ D
Sbjct: 177 DXMAKRNXV----IGTPFWMAPEVIQEIGYN-CVADIWSLGITAIEMAEGKPPYAD 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 34/275 (12%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 11 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 67
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I+ + +D R
Sbjct: 68 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSY 124
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 177
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ D+WS+G ++ MV ++ F + + Q NKV
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENV-DLWSVGCIMGEMVCHKILFPG---RDYIDQ-WNKVI 232
Query: 247 FPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 233 ----EQLGTPCPEFMKKL------QPTVRTYVENR 257
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 243 TP-CPEFMKKLQPTVRNY---VENRPK 265
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 78
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 79 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 195 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 250
Query: 264 IL 265
++
Sbjct: 251 VM 252
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
V +++G G++ V ++ + DVAIK Q + +K E+ + + HPN++
Sbjct: 13 VEEVVGRGAFGVV--CKAKWRAKDVAIK-----QIESESERKAFIVELRQLSRVNHPNIV 65
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQ---GYIDEIRARRWFGQLLEALQYCHE-- 140
+ A + V ++MEYAE GSL++++ G Y A W Q + + Y H
Sbjct: 66 KLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 141 -RGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+ ++HRD+K NLLL + + K+ DFG A +++ +N GS A+ +PE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNK------GSAAWMAPE 174
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTE 256
+ +G Y+ D++S G++L+ ++ R PFD+ ++ V N P
Sbjct: 175 VFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-------- 225
Query: 257 CKELISNILSPVQT 270
LI N+ P+++
Sbjct: 226 ---LIKNLPKPIES 236
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 34/275 (12%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + + E
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMME 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ Y +PE++ G+ Y ++ D+WS+G ++ MV ++ F + + Q NKV
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENV-DLWSVGCIMGEMVCHKILFPG---RDYIDQ-WNKVI 238
Query: 247 FPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 239 ----EQLGTPCPEFMKKL------QPTVRTYVENR 263
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +SK + K+ RE+ ++K +KH N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 101 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 158
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 209
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 270 YIQSLTQMPKMN 281
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 78
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 79 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 195 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 250
Query: 264 IL 265
++
Sbjct: 251 VM 252
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 84
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 85 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 201 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 256
Query: 264 IL 265
++
Sbjct: 257 VM 258
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 55 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 111
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I+ + +D R
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSY 168
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 221
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 280
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 281 TP-CPEFMKKLQPTVRNY---VENRPK 303
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 243 TP-CPEFMKKLQPTVRNY---VENRPK 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 74
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 75 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 191 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 246
Query: 264 IL 265
++
Sbjct: 247 VM 248
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 18 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 74
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSY 131
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 184
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 243
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 244 TP-CPEFMKKLQPTVRNY---VENRPK 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 30 IGTGSYATVKLARSTRHSG---DVAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G GS+ V+ SG VA+K + V + P+ + F+ RE+ + L H NLI
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 74
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + T + ++ E A GSL D +R QG+ R+ Q+ E + Y + +
Sbjct: 75 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ NLLL + +K+ DFG RA N + E +A+ +PE L+
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRA---LPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 205 YAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
++ H SD W GV L+ M +G+ P+ + +++L ++ + +PE +C + I N
Sbjct: 191 FS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE---DCPQDIYN 246
Query: 264 IL 265
++
Sbjct: 247 VM 248
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
V +++G G++ V ++ + DVAIK Q + +K E+ + + HPN++
Sbjct: 12 VEEVVGRGAFGVV--CKAKWRAKDVAIK-----QIESESERKAFIVELRQLSRVNHPNIV 64
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQ---GYIDEIRARRWFGQLLEALQYCHE-- 140
+ A + V ++MEYAE GSL++++ G Y A W Q + + Y H
Sbjct: 65 KLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 141 -RGVVHRDIKCENLLLDSDYNI-KLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+ ++HRD+K NLLL + + K+ DFG A +++ +N GS A+ +PE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNK------GSAAWMAPE 173
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLKQVQNKVTFPKQPEVSTE 256
+ +G Y+ D++S G++L+ ++ R PFD+ ++ V N P
Sbjct: 174 VFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-------- 224
Query: 257 CKELISNILSPVQT 270
LI N+ P+++
Sbjct: 225 ---LIKNLPKPIES 235
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 18 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 74
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSY 131
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 184
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 243
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 244 TP-CPEFMKKLQPTVRNY---VENRPK 266
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 16 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 72
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSY 129
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 130 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 182
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 241
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 242 TP-CPEFMKKLQPTVRNY---VENRPK 264
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + + E
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMME 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P K+L + + V+ RP+
Sbjct: 243 TP----CPAFMKKLQPTVRNYVENRPK 265
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 243 TP-CPEFMKKLQPTVRNY---VENRPK 265
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
IG+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 202
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 263 YIQSLTQMPKMN 274
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 55 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 111
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I+ + +D R
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSY 168
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 221
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 280
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 281 TP-CPEFMKKLQPTVRNY---VENRPK 303
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 10 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 66
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I+ + +D R
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSY 123
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 176
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 236 TP-CPEFMKKLQPTVRNY---VENRPK 258
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 11 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 67
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I+ + +D R
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSY 124
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 177
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 237 TP-CPEFMKKLQPTVRNY---VENRPK 259
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 11 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RE 67
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L + +E VY++ME + +L +I+ + +D R
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSY 124
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 177
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVT 246
+ + Y +PE++ G+ Y ++ DIWS+G ++ MV ++ F + +V ++
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 247 FPKQPEVSTECKELISNILSPVQTRPR 273
P PE + + + N V+ RP+
Sbjct: 237 TP-CPEFMKKLQPTVRNY---VENRPK 259
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLAQMPKMN 269
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 108 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 165
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 216
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 277 YIQSLAQMPKMN 288
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 109 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 166
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 217
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 278 YIQSLAQMPKMN 289
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKXQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 99 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 156
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 207
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 267
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 268 YIQSLAQMPKMN 279
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 36/276 (13%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE 72
D TVL+ Y K IG+G+ V A +VAIK +S+ + K+ RE
Sbjct: 17 DSTFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RE 73
Query: 73 IEVVKGLKHPNLIRFL------QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARR 126
+ ++K + H N+I L +++E VYI+ME + +L +I Q +D R
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSY 130
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
Q+L +++ H G++HRD+K N+++ SD +K+ DFG AR A + +
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMMT 183
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS-VNELLKQVQNKV 245
+ Y +PE++ G+ Y ++ DIWS+G ++ M+ G + F + +++ K ++
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE--- 239
Query: 246 TFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDR 281
++ T C E + + +P ++T E+R
Sbjct: 240 ------QLGTPCPEFMKKL------QPTVRTYVENR 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 20/285 (7%)
Query: 4 STVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD 63
S V + + + VL +G+ IG G++ V R + VA+K + PPD
Sbjct: 96 SGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPD 154
Query: 64 YLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR 123
KFL +E ++K HPN++R + +YI+ME + G +R +G ++
Sbjct: 155 LKAKFL-QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK 213
Query: 124 A-RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADN 182
+ G ++Y + +HRD+ N L+ +K+SDFG +R AA
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG-VXAASG 272
Query: 183 SLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQV 241
L + + +PE L Y+ SD+WS G++L+ G P+ + S + + V
Sbjct: 273 GLRQV---PVKWTAPEALNYGRYSSE-SDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
Query: 242 QNKVTFPKQPEVSTECKELISNIL------SPVQTRPRLKTIAED 280
+ P PE+ C + + ++ P Q RP TI ++
Sbjct: 329 EKGGRLPC-PEL---CPDAVFRLMEQCWAYEPGQ-RPSFSTIYQE 368
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 152
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 203
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 264 YIQSLAQMPKMN 275
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 100 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 157
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 269 YIQSLTQMPKMN 280
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 142
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 193
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 254 YIQSLAQMPKMN 265
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 202
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 263 YIQSLTQMPKMN 274
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 13/247 (5%)
Query: 20 ESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
E H T +G GS+ V + A+K V L+ F E+ GL
Sbjct: 72 EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGL 123
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
P ++ A+ V I ME E GSL +++ QG + E RA + GQ LE L+Y H
Sbjct: 124 TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLH 183
Query: 140 ERGVVHRDIKCENLLLDSD-YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
R ++H D+K +N+LL SD + L DFG A ++ D + G+ + +PE
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVC-LQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
++ G + D+WS ++ M+ G P+ L ++ ++ P E+ C
Sbjct: 243 VVLGRSCDAKV-DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEP--PPVREIPPSCA 299
Query: 259 ELISNIL 265
L + +
Sbjct: 300 PLTAQAI 306
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 148
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 199
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 260 YIQSLTQMPKMN 271
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR + AD + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTG--YVATRWYRAPEIMLNW 204
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 265 YIQSLTQMPKMN 276
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNA 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 152
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 203
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 264 YIQSLTQMPKMN 275
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 100 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 157
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 208
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 269 YIQSLTQMPKMN 280
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKXQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR + AD + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTG--YVATRWYRAPEIMLNW 204
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 265 YIQSLTQMPKMN 276
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 101 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 158
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 209
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 270 YIQSLTQMPKMN 281
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 148
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 199
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 260 YIQSLTQMPKMN 271
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 101 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 158
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 209
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 270 YIQSLTQMPKMN 281
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 152
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 203
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 264 YIQSLTQMPKMN 275
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 112 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 169
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 220
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 281 YIQSLTQMPKMN 292
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 152
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 203
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 264 YIQSLTQMPKMN 275
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 148
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 199
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 260 YIQSLTQMPKMN 271
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR + AD + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTG--YVATRWYRAPEIMLNW 204
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 265 YIQSLTQMPKMN 276
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 153
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 204
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 265 YIQSLTQMPKMN 276
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 108 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 165
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 216
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 277 YIQSLTQMPKMN 288
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 109 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 166
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 217
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 278 YIQSLTQMPKMN 289
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 202
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 263 YIQSLTQMPKMN 274
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 20/285 (7%)
Query: 4 STVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPD 63
S V + + + VL +G+ IG G++ V R + VA+K + PPD
Sbjct: 96 SGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPD 154
Query: 64 YLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIR 123
KFL +E ++K HPN++R + +YI+ME + G +R +G ++
Sbjct: 155 LKAKFL-QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK 213
Query: 124 A-RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADN 182
+ G ++Y + +HRD+ N L+ +K+SDFG +R AA
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG-VYAASG 272
Query: 183 SLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQV 241
L + + +PE L Y+ SD+WS G++L+ G P+ + S + + V
Sbjct: 273 GLRQV---PVKWTAPEALNYGRYSSE-SDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
Query: 242 QNKVTFPKQPEVSTECKELISNIL------SPVQTRPRLKTIAED 280
+ P PE+ C + + ++ P Q RP TI ++
Sbjct: 329 EKGGRLPC-PEL---CPDAVFRLMEQCWAYEPGQ-RPSFSTIYQE 368
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 17/270 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V AR R+S VAIK +S + + + +E+ ++ L+HPN I++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 90 AIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
H +++MEY GS D++ + + E+ L+ L Y H ++HRD+
Sbjct: 83 CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 141
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+LL +KL DFG +A+ + + F G+ + +PE++ + +
Sbjct: 142 KAGNILLSEPGLVKLGDFG----------SASIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 209 LS--DIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
D+WS+G+ + + P F+ ++++ L QN+ + S + + + L
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 251
Query: 266 SPV-QTRPRLKTIAEDRW-LKPKPKSRGVD 293
+ Q RP + + + R+ L+ +P + +D
Sbjct: 252 QKIPQDRPTSEVLLKHRFVLRERPPTVIMD 281
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG AR + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 148
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 199
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 260 YIQSLTQMPKMN 271
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 151
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 202
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 263 YIQSLTQMPKMN 274
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 142
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 193
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 254 YIQSLTQMPKMN 265
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 88 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 145
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 196
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 256
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 257 YIQSLTQMPKMN 268
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 17/270 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V AR R+S VAIK +S + + + +E+ ++ L+HPN I++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 90 AIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHERGVVHRDI 148
H +++MEY GS D++ + + E+ L+ L Y H ++HRD+
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 180
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPH 208
K N+LL +KL DFG +A+ + + F G+ + +PE++ + +
Sbjct: 181 KAGNILLSEPGLVKLGDFG----------SASIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 209 LS--DIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
D+WS+G+ + + P F+ ++++ L QN+ + S + + + L
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 290
Query: 266 SPV-QTRPRLKTIAEDRW-LKPKPKSRGVD 293
+ Q RP + + + R+ L+ +P + +D
Sbjct: 291 QKIPQDRPTSEVLLKHRFVLRERPPTVIMD 320
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 86
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 87 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 144
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 195
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 255
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 256 YIQSLTQMPKMN 267
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 86 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 143
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 194
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 254
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 255 YIQSLTQMPKMN 266
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G GS+ V + A+K V L+ F E+ GL P ++
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 152
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
A+ V I ME E GSL +++ QG + E RA + GQ LE L+Y H R ++H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 150 CENLLLDSD-YNIKLSDFGFARAHMRC-RSNAADNSL--SETFCGSYAYASPEILQGIPY 205
+N+LL SD + L DFG H C + + SL + G+ + +PE++ G
Sbjct: 213 ADNVLLSSDGSHAALCDFG----HAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 206 APHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ D+WS ++ M+ G P+ L ++ ++ P E+ C L + +
Sbjct: 269 DAKV-DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEP--PPVREIPPSCAPLTAQAI 325
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 86 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 143
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 194
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 254
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 255 YIQSLTQMPKMN 266
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 151/332 (45%), Gaps = 47/332 (14%)
Query: 10 DDIDRKVTVLESHG---------YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA 60
DD ++ + VL S G YT K+IG GS+ V A+ S +VAIK V +
Sbjct: 19 DDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLV-ESDEVAIKKVLQD-- 75
Query: 61 PPDYLKKFLPREIEVVKGLKHPNLIR----FLQAIETTHRVYI--IMEYAENGSLFDIIR 114
K+F RE+++++ +KHPN++ F + V++ ++EY +++ R
Sbjct: 76 -----KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASR 129
Query: 115 GQGYIDE----IRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNI-KLSDFGFA 169
+ + + + + QLL +L Y H G+ HRDIK +NLLLD + KL DFG A
Sbjct: 130 HYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189
Query: 170 RAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+ + N + C Y Y +PE++ G DIWS G V+ ++ G+ F
Sbjct: 190 KILIAGEPNVS------XICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
Query: 230 DDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQT-------RPRLKTIAED-- 280
S + L ++ + P + ++ T + + ++ RPR A D
Sbjct: 243 PGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLI 302
Query: 281 -RWLKPKPKSRGVDKAEAELDHYIDMIQTSAS 311
R L+ P +R + EA + D ++T +
Sbjct: 303 SRLLEYTPSAR-LTAIEALCHPFFDELRTGEA 333
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 27 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 80
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL-------IEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 194 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 26 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 140 LRAANILVSDTLSCKIADFGLARL-------IEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 193 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 27 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 80
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 194 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 230
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 21 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 188 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 29 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 82
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 143 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 196 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 232
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 22 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 75
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 136 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 189 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 31 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 84
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 145 LRAANILVSDTLSCKIADFGLARL-------IEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 198 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 234
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 23 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 76
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 137 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 190 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 21 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL-------IEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 188 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 47/281 (16%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLP---REIEVVKGLKH 81
T+ +IIG G + K+ R+ +VA+K + P + + + + +E ++ LKH
Sbjct: 10 TLEEIIGIGGFG--KVYRAFWIGDEVAVK--AARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 82 PNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
PN+I + ++ME+A G L ++ G+ +I W Q+ + Y H+
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVN-WAVQIARGMNYLHDE 124
Query: 142 GVV---HRDIKCENLLLD--------SDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+V HRD+K N+L+ S+ +K++DFG AR R +A G
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA--------AG 176
Query: 191 SYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQNKVTFPK 249
+YA+ +PE+++ ++ SD+WS GV+L+ ++ G +PF + NK+ P
Sbjct: 177 AYAWMAPEVIRASMFSKG-SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP- 234
Query: 250 QPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSR 290
+ + C E + ++ ED W P P SR
Sbjct: 235 ---IPSTCPEPFAKLM-------------EDCW-NPDPHSR 258
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 30 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 83
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 144 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 197 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 21 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL-------IEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 188 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 16 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 69
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 130 LRAANILVSDTLSCKIADFGLARL-------IEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 183 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKSQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG CR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGL------CRH--TDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S + + ++G G+Y V A VAIK + P L+ REI+++K K
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFK 67
Query: 81 HPNLIRFLQ-----AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
H N+I + E + VYII E + L +I Q D+ + + Q L A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDD-HIQYFIYQTLRAV 125
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE-------TF 188
+ H V+HRD+K NLL++S+ ++K+ DFG AR +AADNS F
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI---IDESAADNSEPTGQQSGMVEF 182
Query: 189 CGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLP 228
+ Y +PE++ D+WS G +L A +F R P
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRP 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 112 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 169
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ + + + Y +PEI+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMX-GYVATRWYRAPEIMLNW 220
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 281 YIQSLTQMPKMN 292
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 109 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 166
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ + + Y +PEI+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVATRW-YRAPEIMLNW 217
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 278 YIQSLAQMPKMN 289
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGXVATRW-YRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 18/219 (8%)
Query: 27 GKIIGTGSYATVKLARSTRHSGDVAIK-IVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
G +G G + V + ++ VA+K + + V + LK+ +EI+V+ +H NL+
Sbjct: 36 GNKMGEGGFGVV--YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQL------LEALQYCH 139
L + ++ Y NGSL D + +D W + + + H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
E +HRDIK N+LLD + K+SDFG ARA + A + G+ AY +PE
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF----AQTVMXSRIVGTTAYMAPEA 206
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL 238
L+G P SDI+S GVVL ++ G D+ +LL
Sbjct: 207 LRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 121/238 (50%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 61
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDIIRGQG-YIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D ++ ID I+
Sbjct: 62 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 181 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 97
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 214
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 215 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 268
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 70
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 187
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 188 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 87
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 204
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 205 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 258
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 18/219 (8%)
Query: 27 GKIIGTGSYATVKLARSTRHSGDVAIK-IVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
G +G G + V + ++ VA+K + + V + LK+ +EI+V+ +H NL+
Sbjct: 36 GNKMGEGGFGVV--YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQL------LEALQYCH 139
L + ++ Y NGSL D + +D W + + + H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
E +HRDIK N+LLD + K+SDFG ARA + A + G+ AY +PE
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF----AQTVMXXRIVGTTAYMAPEA 206
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL 238
L+G P SDI+S GVVL ++ G D+ +LL
Sbjct: 207 LRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ D+G AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V R VAIKI+ +A + + + +EI V+ P + ++
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ +++IIMEY GS D++ G +DE + ++L+ L Y H +HRDIK
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS-ETFCGSYAYASPEILQGIPYAPH 208
N+LL +KL+DFG A D + TF G+ + +PE+++ Y
Sbjct: 152 AANVLLSEHGEVKLADFGVA-------GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 209 LSDIWSMGVVLFAMVFGRLP 228
+DIWS+G+ + G P
Sbjct: 205 -ADIWSLGITAIELARGEPP 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V R VAIKI+ +A + + + +EI V+ P + ++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ +++IIMEY GS D++ G +DE + ++L+ L Y H +HRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS-ETFCGSYAYASPEILQGIPYAPH 208
N+LL +KL+DFG A D + TF G+ + +PE+++ Y
Sbjct: 132 AANVLLSEHGEVKLADFGVA-------GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 209 LSDIWSMGVVLFAMVFGRLP 228
+DIWS+G+ + G P
Sbjct: 185 -ADIWSLGITAIELARGEPP 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ EY ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG R + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A R VAIK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 108
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + Y++M + + I G + +E + + Q+L+ L+Y H GV
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEE-KIQYLVYQMLKGLKYIHSAGV 165
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K NL ++ D +K+ DFG AR AD ++ + + Y +PE++
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMT-GYVVTRWYRAPEVILSW 216
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ M+ G+ F + L Q+ P V + +
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276
Query: 264 ILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKAEAELDHYIDMIQTSASS 312
+ + PR K + L P+ + D E L+ +D T+A +
Sbjct: 277 YIQSLPQTPR-KDFTQ---LFPRASPQAADLLEKMLELDVDKRLTAAQA 321
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 22/221 (9%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S + + ++G G+Y V A VAIK + P L+ REI+++K K
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFK 67
Query: 81 HPNLIRFLQ-----AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
H N+I + E + VYII E + L +I Q D+ + + Q L A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDD-HIQYFIYQTLRAV 125
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNS--------LSET 187
+ H V+HRD+K NLL++S+ ++K+ DFG AR +AADNS ++E
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI---IDESAADNSEPTGQQSGMTE- 181
Query: 188 FCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLP 228
+ + Y +PE++ D+WS G +L A +F R P
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRP 221
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 82 PNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIRARRWFGQLLEAL 135
P+++ L E H + IIME E G LF I RG E A + A+
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 136 QYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
Q+ H + HRD+K ENLL S D +KL+DFGFA+ N+L +T C +
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-------ETTQNAL-QTPCYTP 174
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTF----- 247
Y +PE+L Y D+WS+GV+++ ++ G PF ++ + ++ ++
Sbjct: 175 YYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 233
Query: 248 --PKQPEVSTECKELISNIL 265
P+ EVS + K+LI +L
Sbjct: 234 PNPEWSEVSEDAKQLIRLLL 253
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 5 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 62
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+
Sbjct: 63 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 121
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 182 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 234
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 1 MIDSTVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA 60
+++ TV QD+ R L + + IG G + V L VA+K +
Sbjct: 172 VMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDAT 229
Query: 61 PPDYLKKFLPREIEVVKGLKHPNLIRFLQAI-ETTHRVYIIMEYAENGSLFDIIRGQG-- 117
+L E V+ L+H NL++ L I E +YI+ EY GSL D +R +G
Sbjct: 230 AQAFLA-----EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 118 YIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRS 177
+ ++ + EA++Y VHRD+ N+L+ D K+SDFG +
Sbjct: 285 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA----- 339
Query: 178 NAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNE 236
+S +T + +PE L+ ++ SD+WS G++L+ + FGR+P+ + +
Sbjct: 340 ----SSTQDTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKD 394
Query: 237 LLKQVQ 242
++ +V+
Sbjct: 395 VVPRVE 400
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ D+ + Q+L L+Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCAKLTDD-HVQFLIYQILRGLKYIHSADI 142
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 193
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 254 YIQSLAQMPKMN 265
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 18/219 (8%)
Query: 27 GKIIGTGSYATVKLARSTRHSGDVAIK-IVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
G +G G + V + ++ VA+K + + V + LK+ +EI+V+ +H NL+
Sbjct: 30 GNKMGEGGFGVV--YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQL------LEALQYCH 139
L + ++ Y NGSL D + +D W + + + H
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
E +HRDIK N+LLD + K+SDFG ARA + A + G+ AY +PE
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF----AQXVMXXRIVGTTAYMAPEA 200
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL 238
L+G P SDI+S GVVL ++ G D+ +LL
Sbjct: 201 LRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 32 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 89
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+
Sbjct: 90 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 148
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 209 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 261
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 6 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 63
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+
Sbjct: 64 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 122
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 183 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 235
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 61
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+
Sbjct: 62 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 120
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 181 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 233
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 82 PNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIRARRWFGQLLEAL 135
P+++ L E H + IIME E G LF I RG E A + A+
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 136 QYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
Q+ H + HRD+K ENLL S D +KL+DFGFA+ N+L +T C +
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-------ETTQNAL-QTPCYTP 193
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTF----- 247
Y +PE+L Y D+WS+GV+++ ++ G PF ++ + ++ ++
Sbjct: 194 YYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 252
Query: 248 --PKQPEVSTECKELISNIL 265
P+ EVS + K+LI +L
Sbjct: 253 PNPEWSEVSEDAKQLIRLLL 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 21 LGAGQAGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
++ N+L+ + K++DFG AR A+ + E + +PE + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL-----IEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 208 HLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 190 K-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 7 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 64
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+
Sbjct: 65 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 123
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 184 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 236
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 8 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 65
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+
Sbjct: 66 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 124
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 185 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A R VAIK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 90
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ + Y++M + + I G + +E + + Q+L+ L+Y H GV
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEE-KIQYLVYQMLKGLKYIHSAGV 147
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+K NL ++ D +K+ DFG AR AD ++ + + Y +PE++
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMT-GYVVTRWYRAPEVILSW 198
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ M+ G+ F + L Q+ P V + +
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258
Query: 264 ILSPVQTRPRLKTIAEDRWLKPKPKSRGVDKAEAELDHYIDMIQTSASS 312
+ + PR K + L P+ + D E L+ +D T+A +
Sbjct: 259 YIQSLPQTPR-KDFTQ---LFPRASPQAADLLEKMLELDVDKRLTAAQA 303
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 29 IIGTGSYATVKLARSTRHSGDVAIKIV--SKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
+G G +ATV AR + VAIK + D + + REI++++ L HPN+I
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
L A + ++ ++ E I + + + L+ L+Y H+ ++HR
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
D+K NLLLD + +KL+DFG A +S + N + Y +PE+L G
Sbjct: 137 DLKPNNLLLDENGVLKLADFGLA------KSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 207 PHLSDIWSMGVVLFAMVFGRLPF--DDSSVNELLK 239
D+W++G +L ++ R+PF DS +++L +
Sbjct: 191 GVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTR 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + H+ VA+K + + PD FL E ++K L+H L+R L
Sbjct: 17 LGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 70
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI--RARRWFGQLLEALQYCHERGVVHRD 147
A+ T +YII EY ENGSL D ++ I + Q+ E + + ER +HR+
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE + +
Sbjct: 131 LRAANILVSDTLSCKIADFGLARL-------IEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 206 APHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQ 242
SD+WS G++L +V GR+P+ + E+++ ++
Sbjct: 184 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S + + ++G G+Y V A VAIK + P L+ REI+++K K
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFK 67
Query: 81 HPNLIRFLQ-----AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
H N+I + E + VYII E + L +I Q D+ + + Q L A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDD-HIQYFIYQTLRAV 125
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNS--------LSET 187
+ H V+HRD+K NLL++S+ ++K+ DFG AR +AADNS ++E
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI---IDESAADNSEPTGQQSGMTEX 182
Query: 188 FCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLP 228
+ Y +PE++ D+WS G +L A +F R P
Sbjct: 183 VATRW-YRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRP 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 27 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 81
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S+ F ++ P
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEETSSVGSKF--PVRWSPP 190
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 191 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 248
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 7 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 61
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S+ F ++ P
Sbjct: 116 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKF--PVRWSPP 170
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 171 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 228
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 12 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 66
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S+ F ++ P
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKF--PVRWSPP 175
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 176 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 233
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 18 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 72
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 73 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S+ F ++ P
Sbjct: 127 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKF--PVRWSPP 181
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 182 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 239
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 11 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 65
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S+ F ++ P
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKF--PVRWSPP 174
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 175 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ FG AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 27 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 81
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S+ F ++ P
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKF--PVRWSPP 190
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 191 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 248
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DF AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y V A R VAIK + + + K+ RE+ ++K ++H N+I L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGLLD 91
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+ ++ Y++M + G+ + + E R + Q+L+ L+Y H G+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR AD+ + + Y +PE++
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLARQ--------ADSEMXGXVVTRW-YRAPEVILNW 200
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFP 248
DIWS+G ++ M+ G+ F S + LK++ P
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+T + IG GS+ V R VAIKI+ +A + + + +EI V+ P
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY 81
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+ ++ + +++IIMEY GS D++ G +DE + ++L+ L Y H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKK 140
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSET-FCGSYAYASPEILQG 202
+HRDIK N+LL +KL+DFG A D + F G+ + +PE+++
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVA-------GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLP 228
Y +DIWS+G+ + G P
Sbjct: 194 SAYDSK-ADIWSLGITAIELARGEPP 218
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVS--KVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G G++ V A++ S A K++ + DY+ EI+++ HPN+++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILASCDHPNIVKL 99
Query: 88 LQAIETTHRVYIIMEYAENGSLFDI-IRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
L A + ++I++E+ G++ + + + + E + + Q L+AL Y H+ ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL-----Q 201
D+K N+L D +IKL+DFG + + R ++F G+ + +PE++ +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQR------RDSFIGTPYWMAPEVVMCETSK 213
Query: 202 GIPYAPHLSDIWSMGVVLFAM 222
PY + +D+WS+G+ L M
Sbjct: 214 DRPY-DYKADVWSLGITLIEM 233
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 22/220 (10%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+Y V A T + VAIK + +++ + + RE+ ++K L+H N+I
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHERGVVHR 146
I HR+++I EYAEN D+ + ++ R + QL+ + +CH R +HR
Sbjct: 101 VIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHR 156
Query: 147 DIKCENLLLD-SDYN----IKLSDFGFARAH-MRCRSNAADNSLSETFCGSYAYASPEIL 200
D+K +NLLL SD + +K+ DFG ARA + R + + Y PEIL
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE-------IITLWYRPPEIL 209
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNELLK 239
G + DIWS+ + M+ F DS +++L K
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ D G AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V R VAIKI+ +A + + + +EI V+ P + ++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ +++IIMEY GS D++ G +DE + ++L+ L Y H +HRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSET-FCGSYAYASPEILQGIPYAPH 208
N+LL +KL+DFG A D + F G+ + +PE+++ Y
Sbjct: 132 AANVLLSEHGEVKLADFGVA-------GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 209 LSDIWSMGVVLFAMVFGRLP 228
+DIWS+G+ + G P
Sbjct: 185 -ADIWSLGITAIELARGEPP 203
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ E + G LF I RG E
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTERE 162
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA + +
Sbjct: 163 ASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTS 216
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
NSL+ T C + Y +PE+L Y D WS+GV+ + ++ G PF +
Sbjct: 217 HNSLT-TPCYTPYYVAPEVLGPEKYDKS-CDXWSLGVIXYILLCGYPPFYSNHGLAISPG 274
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
++ Q + P+ EVS E K LI N+L
Sbjct: 275 XKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLL 306
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVS--KVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G G++ V A++ S A K++ + DY+ EI+++ HPN+++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILASCDHPNIVKL 99
Query: 88 LQAIETTHRVYIIMEYAENGSLFDI-IRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
L A + ++I++E+ G++ + + + + E + + Q L+AL Y H+ ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL-----Q 201
D+K N+L D +IKL+DFG + + R ++F G+ + +PE++ +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQR------RDSFIGTPYWMAPEVVMCETSK 213
Query: 202 GIPYAPHLSDIWSMGVVLFAM 222
PY + +D+WS+G+ L M
Sbjct: 214 DRPY-DYKADVWSLGITLIEM 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ D G AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL- 88
+G+G+Y +V A T+ VA+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 89 -----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
+++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 146
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ D G AR D+ ++ + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 197
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + + LK + V P + E N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 264 ILSPVQTRPRLK 275
+ + P++
Sbjct: 258 YIQSLTQMPKMN 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ E ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 20/277 (7%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT + IG G+Y V A VAIK +S + Y ++ L REI+++ +H N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQ-TYCQRTL-REIQILLRFRHEN 102
Query: 84 LI---RFLQA--IETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I L+A +E VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQLSND-HICYFLYQILRGLKYI 160
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLL+++ ++K+ DFG AR + + L+E + Y +PE
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLAR--IADPEHDHTGFLTEXVATRW-YRAPE 217
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 259 ELISNILSPVQTRPRLKTIAEDRWLK--PKPKSRGVD 293
N L Q+ P +A W K PK S+ +D
Sbjct: 278 MKARNYL---QSLPSKTKVA---WAKLFPKSDSKALD 308
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 121/251 (48%), Gaps = 17/251 (6%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ + + IG GS+ V + + A+K ++K + + + +E+++++GL+HP
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
L+ + + ++++++ G L ++ + E + + +L+ AL Y + +
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL--- 200
+HRD+K +N+LLD ++ ++DF A R + T G+ Y +PE+
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPR-------ETQITTMAGTKPYMAPEMFSSR 189
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQVQNK-VTFPKQPEVSTE 256
+G Y+ D WS+GV + ++ GR P+ +S E++ + VT+P S E
Sbjct: 190 KGAGYS-FAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA--WSQE 246
Query: 257 CKELISNILSP 267
L+ +L P
Sbjct: 247 MVSLLKKLLEP 257
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 26/240 (10%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T K +GTG + VK + R DVAIK++ + D +F+ E +V+ L H L
Sbjct: 12 TFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKL 66
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE-------ALQY 137
++ ++II EY NG L + Y+ E+R R QLLE A++Y
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASP 197
+ +HRD+ N L++ +K+SDFG +R + + +S F ++ P
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSRGSKF--PVRWSPP 175
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTE 256
E+L ++ SDIW+ GV+++ + G++P++ + +E + + + + P +++E
Sbjct: 176 EVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-PHLASE 233
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLAFRHEN 84
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 199
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ V VAIKI+ +A + + + +EI V+ P + R+
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIK 149
+ + +++IIMEY GS D+++ G ++E ++L+ L Y H +HRDIK
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 150 CENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSET-FCGSYAYASPEILQGIPYAPH 208
N+LL ++KL+DFG A D + F G+ + +PE+++ Y
Sbjct: 144 AANVLLSEQGDVKLADFGVA-------GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD-F 195
Query: 209 LSDIWSMGVVLFAMVFGRLPFDD 231
+DIWS+G+ + G P D
Sbjct: 196 KADIWSLGITAIELAKGEPPNSD 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLAFRHEN 84
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 199
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 27 GKIIGTGSYATVKLARSTRHSGDVAIK-IVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
G G G + V + ++ VA+K + + V + LK+ +EI+V +H NL+
Sbjct: 27 GNKXGEGGFGVV--YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQL------LEALQYCH 139
L + ++ Y NGSL D + +D W + + + H
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
E +HRDIK N+LLD + K+SDFG ARA + A G+ AY +PE
Sbjct: 142 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF----AQXVXXSRIVGTTAYXAPEA 197
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELL 238
L+G P SDI+S GVVL ++ G D+ +LL
Sbjct: 198 LRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 29/288 (10%)
Query: 2 IDSTVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAP 61
+ +V QD+ R L + + IG G + V L VA+K +
Sbjct: 1 MGGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA 58
Query: 62 PDYLKKFLPREIEVVKGLKHPNLIRFLQAI-ETTHRVYIIMEYAENGSLFDIIRGQG--Y 118
+L E V+ L+H NL++ L I E +YI+ EY GSL D +R +G
Sbjct: 59 QAFLA-----EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 113
Query: 119 IDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSN 178
+ ++ + EA++Y VHRD+ N+L+ D K+SDFG +
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------ 167
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNEL 237
+S +T + +PE L+ ++ SD+WS G++L+ + FGR+P+ + ++
Sbjct: 168 ---SSTQDTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDV 223
Query: 238 LKQVQNKVTF-------PKQPEVSTECKELISNIL-SPVQTRPRLKTI 277
+ +V+ P EV C L + + S +Q R +L+ I
Sbjct: 224 VPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 121/237 (51%), Gaps = 15/237 (6%)
Query: 14 RKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFL 69
R T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF- 57
Query: 70 PREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARR 126
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+ +
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
+ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + + E
Sbjct: 118 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 178 SPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 99
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ E ENGSL +R I+ +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 216
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 217 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 121/237 (51%), Gaps = 15/237 (6%)
Query: 14 RKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFL 69
R T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF- 58
Query: 70 PREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARR 126
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+ +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
+ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + + E
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 179 SPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 28 KIIGT-GSYATVKLARSTRHSGDVAIKIVS--KVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+IIG G + V A++ S A K++ + DY+ EI+++ HPN+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILASCDHPNI 69
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDI-IRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ L A + ++I++E+ G++ + + + + E + + Q L+AL Y H+ +
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL--- 200
+HRD+K N+L D +IKL+DFG + + R D +F G+ + +PE++
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRD-----SFIGTPYWMAPEVVMCE 184
Query: 201 --QGIPYAPHLSDIWSMGVVLFAM 222
+ PY + +D+WS+G+ L M
Sbjct: 185 TSKDRPYD-YKADVWSLGITLIEM 207
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 30 IGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFLPREIEVVKGLKHPNLI 85
+G G++ +V++ R ++G+V V K+Q + ++L+ F REIE++K L+H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF-EREIEILKSLQHDNIV 72
Query: 86 RFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERG 142
++ + R + +IMEY GSL D + + + ID I+ ++ Q+ + ++Y +
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+HRD+ N+L++++ +K+ DFG + + + E+ YA PE L
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA---PESLTE 189
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 190 SKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 80
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 138
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P+Q +++
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLN 251
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVS--KVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G G++ V A++ S A K++ + DY+ EI+++ HPN+++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILASCDHPNIVKL 99
Query: 88 LQAIETTHRVYIIMEYAENGSLFDI-IRGQGYIDEIRARRWFGQLLEALQYCHERGVVHR 146
L A + ++I++E+ G++ + + + + E + + Q L+AL Y H+ ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL-----Q 201
D+K N+L D +IKL+DFG + + R + F G+ + +PE++ +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQR------RDXFIGTPYWMAPEVVMCETSK 213
Query: 202 GIPYAPHLSDIWSMGVVLFAM 222
PY + +D+WS+G+ L M
Sbjct: 214 DRPY-DYKADVWSLGITLIEM 233
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 21/270 (7%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH-PNL 84
K +G G +A V+ S + A K + K + D + L EI V++ K P +
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL-HEIAVLELAKSCPRV 91
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERG 142
I + E T + +I+EYA G +F + + + E R Q+LE + Y H+
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 143 VVHRDIKCENLLLDSDY---NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+VH D+K +N+LL S Y +IK+ DFG +R +A + L E G+ Y +PEI
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK----IGHACE--LREIM-GTPEYLAPEI 204
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQVQNKVTFPKQPEVSTE 256
L P +D+W++G++ + ++ PF D+ + QV + VS
Sbjct: 205 LNYDPITT-ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263
Query: 257 CKELISNIL--SPVQTRPRLKTIAEDRWLK 284
+ I ++L +P + RP + WL+
Sbjct: 264 ATDFIQSLLVKNP-EKRPTAEICLSHSWLQ 292
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 86
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 201
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYXQRTL-REIKILLRFRHEN 86
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 201
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ ++ K++G G + V +L ++ VAIK + KV + FL E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASI 70
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN+IR + + V I+ E ENGSL +R I+ +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 187
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
SPE + + SD+WS G+VL+ M +G P+ + S +++K V P
Sbjct: 188 TSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 30 IGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFLPREIEVVKGLKHPNLI 85
+G G++ +V++ R ++G+V V K+Q + ++L+ F REIE++K L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF-EREIEILKSLQHDNIV 74
Query: 86 RFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERG 142
++ + R + +IMEY GSL D + + + ID I+ ++ Q+ + ++Y +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+HRD+ N+L++++ +K+ DFG + + + E+ YA PE L
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA---PESLTE 191
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 192 SKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 82
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 197
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 82
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 197
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 30 IGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFLPREIEVVKGLKHPNLI 85
+G G++ +V++ R ++G+V V K+Q + ++L+ F REIE++K L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF-EREIEILKSLQHDNIV 92
Query: 86 RFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERG 142
++ + R + +IMEY GSL D + + + ID I+ ++ Q+ + ++Y +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+HRD+ N+L++++ +K+ DFG + + + E+ YA PE L
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA---PESLTE 209
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 210 SKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 248
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 82
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 197
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 80
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 138
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 251
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 30 IGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFLPREIEVVKGLKHPNLI 85
+G G++ +V++ R ++G+V V K+Q + ++L+ F REIE++K L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF-EREIEILKSLQHDNIV 92
Query: 86 RFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERG 142
++ + R + +IMEY GSL D + + + ID I+ ++ Q+ + ++Y +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+HRD+ N+L++++ +K+ DFG + + + E+ YA PE L
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA---PESLTE 209
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 210 SKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 248
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 13 DRKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKF 68
DR T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 4 DRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF 61
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRAR 125
REIE++K L+H N++++ + R + +IME+ GSL + + + + ID I+
Sbjct: 62 -EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL 120
Query: 126 RWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS 185
++ Q+ + ++Y + +HRD+ N+L++++ +K+ DFG + + +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 186 ETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
E+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 181 ESPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 102
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 217
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 273
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 87
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 145
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 202
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 258
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 88
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 146
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 203
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 259
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 79
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 137
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 194
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 250
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 86
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 201
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 86
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKCQ-HLSNDHICYFLYQILRGLKYI 144
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 201
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 90
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 148
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 205
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 261
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 82
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 197
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 82
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 197
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 107/202 (52%), Gaps = 22/202 (10%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G++ V A++ A K++ + L+ ++ EIE++ HP +++ L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYI-VEIEILATCDHPYIVKLLG 75
Query: 90 AIETTHRVYIIMEYAENGS----LFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVH 145
A +++I++E+ G+ + ++ RG + E + + Q+LEAL + H + ++H
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI-----L 200
RD+K N+L+ + +I+L+DFG + +++ ++F G+ + +PE+ +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK------RDSFIGTPYWMAPEVVMCETM 186
Query: 201 QGIPYAPHLSDIWSMGVVLFAM 222
+ PY + +DIWS+G+ L M
Sbjct: 187 KDTPYD-YKADIWSLGITLIEM 207
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 84
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 199
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 18/250 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G+G+Y +V + + +A+K +S+ + K+ RE+ ++K +KH N+I L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 90 ------AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++E + VY++ + L +I++ Q D+ + Q+L L+Y H +
Sbjct: 118 VFTPATSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADI 175
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
+HRD+K NL ++ D +K+ DFG AR D+ ++ + + Y +PEI+
Sbjct: 176 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMT-GYVATRWYRAPEIMLNW 226
Query: 204 PYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ DIWS+G ++ ++ GR F + L+Q+ P +S N
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARN 286
Query: 264 ILSPVQTRPR 273
++ + P+
Sbjct: 287 YINSLPQMPK 296
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 107/202 (52%), Gaps = 22/202 (10%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G++ V A++ A K++ + L+ ++ EIE++ HP +++ L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYI-VEIEILATCDHPYIVKLLG 83
Query: 90 AIETTHRVYIIMEYAENGS----LFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVH 145
A +++I++E+ G+ + ++ RG + E + + Q+LEAL + H + ++H
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI-----L 200
RD+K N+L+ + +I+L+DFG + +++ ++F G+ + +PE+ +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK------RDSFIGTPYWMAPEVVMCETM 194
Query: 201 QGIPYAPHLSDIWSMGVVLFAM 222
+ PY + +DIWS+G+ L M
Sbjct: 195 KDTPYD-YKADIWSLGITLIEM 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEV 75
+V++ T + IG+G + V L + VAIK + + + D+++ E EV
Sbjct: 2 SVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE-----EAEV 55
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLL--- 132
+ L HP L++ + ++ E+ E+G L D +R Q + A G L
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVC 113
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
E + Y E V+HRD+ N L+ + IK+SDFG R + + +S F
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PV 168
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVF--GRLPFDDSSVNELLKQVQNKVTFPKQ 250
+ASPE+ Y+ SD+WS GV+++ VF G++P+++ S +E+++ + K
Sbjct: 169 KWASPEVFSFSRYSSK-SDVWSFGVLMWE-VFSEGKIPYENRSNSEVVEDISTGFRLYKP 226
Query: 251 PEVSTECKELISN 263
ST +++++
Sbjct: 227 RLASTHVYQIMNH 239
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++ N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEV 75
+V++ T + IG+G + V L + VAIK + + + D+++ E EV
Sbjct: 2 SVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE-----EAEV 55
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLL--- 132
+ L HP L++ + ++ E+ E+G L D +R Q + A G L
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVC 113
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
E + Y E V+HRD+ N L+ + IK+SDFG R + + +S F
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PV 168
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMVF--GRLPFDDSSVNELLKQVQNKVTFPKQ 250
+ASPE+ Y+ SD+WS GV+++ VF G++P+++ S +E+++ + K
Sbjct: 169 KWASPEVFSFSRYSSK-SDVWSFGVLMWE-VFSEGKIPYENRSNSEVVEDISTGFRLYKP 226
Query: 251 PEVSTECKELISN 263
ST +++++
Sbjct: 227 RLASTHVYQIMNH 239
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+MEY G L D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
SD+WS G++L + GR+P+ E+L QV+ P PE +L+
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAI+ +S + Y ++ L REI+++ +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQ-TYCQRTL-REIKILLRFRHEN 86
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 201
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 23/233 (9%)
Query: 30 IGTGSYATVKLARSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLK---HPNLI 85
IG G+Y V AR ++ G VA+K V +VQ + + RE+ V++ L+ HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 86 RFLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
R + ++ ++ E+ + + D + G E F QLL L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFL 136
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H VVHRD+K +N+L+ S IKL+DFG AR + A S+ T Y +PE
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLW----YRAPE 189
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
+L YA + D+WS+G + FA +F R P F SS + L ++ + + P +
Sbjct: 190 VLLQSSYATPV-DLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 21/252 (8%)
Query: 18 VLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVV 76
V++ T + IG+G + V L + VAIK + + + D+++ E EV+
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE-----EAEVM 54
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLL---E 133
L HP L++ + ++ E+ E+G L D +R Q + A G L E
Sbjct: 55 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCE 112
Query: 134 ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
+ Y E V+HRD+ N L+ + IK+SDFG R + + +S F
Sbjct: 113 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVK 167
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVF--GRLPFDDSSVNELLKQVQNKVTFPKQP 251
+ASPE+ Y+ SD+WS GV+++ VF G++P+++ S +E+++ + K
Sbjct: 168 WASPEVFSFSRYSSK-SDVWSFGVLMWE-VFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
Query: 252 EVSTECKELISN 263
ST +++++
Sbjct: 226 LASTHVYQIMNH 237
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI++EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 12/265 (4%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
+E+ T+ ++IG G + V +L + VAIK + KV + FL E +
Sbjct: 19 IEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTL-KVGYTEKQRRDFL-GEASI 76
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEA 134
+ HPN+I + + V I+ EY ENGSL ++ G I+ +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
++Y + G VHRD+ N+L++S+ K+SDFG +R + AA + +
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGGKI--PIRW 193
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEV 253
+PE + + SD+WS G+V++ +V +G P+ + + +++K V+ P +
Sbjct: 194 TAPEAIAFRKFT-SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDC 252
Query: 254 STECKELISNILSPVQ-TRPRLKTI 277
+L+ + + +RP+ I
Sbjct: 253 PAALYQLMLDCWQKERNSRPKFDEI 277
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 23/233 (9%)
Query: 30 IGTGSYATVKLARSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLK---HPNLI 85
IG G+Y V AR ++ G VA+K V +VQ + + RE+ V++ L+ HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 86 RFLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
R + ++ ++ E+ + + D + G E F QLL L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFL 136
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H VVHRD+K +N+L+ S IKL+DFG AR + A S+ T Y +PE
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLW----YRAPE 189
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
+L YA + D+WS+G + FA +F R P F SS + L ++ + + P +
Sbjct: 190 VLLQSSYATPV-DLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 23/233 (9%)
Query: 30 IGTGSYATVKLARSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLK---HPNLI 85
IG G+Y V AR ++ G VA+K V +VQ + + RE+ V++ L+ HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 86 RFLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
R + ++ ++ E+ + + D + G E F QLL L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFL 136
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H VVHRD+K +N+L+ S IKL+DFG AR + A S+ T Y +PE
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLW----YRAPE 189
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
+L YA + D+WS+G + FA +F R P F SS + L ++ + + P +
Sbjct: 190 VLLQSSYATPV-DLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI++EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 21/240 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
IG+G + V L + VAIK + + + D+++ E EV+ L HP L++
Sbjct: 18 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 71
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLL---EALQYCHERGVVH 145
+ ++ E+ E+G L D +R Q + A G L E + Y E V+H
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+ N L+ + IK+SDFG R + + +S F +ASPE+ Y
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 184
Query: 206 APHLSDIWSMGVVLFAMVF--GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ SD+WS GV+++ VF G++P+++ S +E+++ + K ST +++++
Sbjct: 185 SSK-SDVWSFGVLMWE-VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH 242
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG+G + V L + VAIK + + D F+ E EV+ L HP L++
Sbjct: 35 IGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSED---DFI-EEAEVMMKLSHPKLVQLYG 89
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLL---EALQYCHERGVVHR 146
+ ++ E+ E+G L D +R Q + A G L E + Y E V+HR
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 147 DIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYA 206
D+ N L+ + IK+SDFG R + + +S F +ASPE+ Y+
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRYS 202
Query: 207 PHLSDIWSMGVVLFAMVF--GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
SD+WS GV+++ VF G++P+++ S +E+++ + K ST +++++
Sbjct: 203 SK-SDVWSFGVLMWE-VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH 259
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 30 IGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFLPREIEVVKGLKHPNLI 85
+G G++ +V++ R ++G+V V K+Q + ++L+ F REIE++K L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF-EREIEILKSLQHDNIV 74
Query: 86 RFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERG 142
++ + R + +IMEY GSL D + + + ID I+ ++ Q+ + ++Y +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
+HRD+ N+L++++ +K+ DFG + + + E+ YA PE L
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA---PESLTE 191
Query: 203 IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 192 SKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 76
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 137 LRAANILVGENLVCKVADFGLARL-------IEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 190 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 244
Query: 265 L 265
+
Sbjct: 245 M 245
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 141/332 (42%), Gaps = 72/332 (21%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S Y++GK +GTGS+ V A+K KV P Y RE++++K L
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALK---KVLQDPRYKN----RELDIMKVLD 58
Query: 81 HPNLIRFLQAIETT---------------------------HR-----------VYIIME 102
H N+I+ + TT H+ + +IME
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 103 YAENG---SLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS-D 158
Y + L IR I + QL A+ + H G+ HRDIK +NLL++S D
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 159 YNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG-IPYAPHLSDIWSMGV 217
+KL DFG A+ + + A C + Y +PE++ G Y P + D+WS+G
Sbjct: 179 NTLKLCDFGSAKKLIPSEPSVA------XICSRF-YRAPELMLGATEYTPSI-DLWSIGC 230
Query: 218 VLFAMVFGRLPFD-DSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQTRPRLKT 276
V ++ G+ F ++S+++L++ +Q + T KE + ++P T R T
Sbjct: 231 VFGELILGKPLFSGETSIDQLVRIIQ---------IMGTPTKEQMIR-MNPHYTEVRFPT 280
Query: 277 IAEDRWLKPKPK---SRGVDKAEAELDHYIDM 305
+ W K P+ S +D E L + D+
Sbjct: 281 LKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 86
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + Y +PE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLXEXVATRWYRAPE 201
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 87
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VYI+ + E L+ +++ Q ++ + Q+L L+Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 145
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + Y +PE
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLXEXVATRWYRAPE 202
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 258
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 21/240 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSK-VQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
IG+G + V L + VAIK + + + D+++ E EV+ L HP L++
Sbjct: 16 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 69
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLL---EALQYCHERGVVH 145
+ ++ E+ E+G L D +R Q + A G L E + Y E V+H
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIH 127
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPY 205
RD+ N L+ + IK+SDFG R + + +S F +ASPE+ Y
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKF--PVKWASPEVFSFSRY 182
Query: 206 APHLSDIWSMGVVLFAMVF--GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISN 263
+ SD+WS GV+++ VF G++P+++ S +E+++ + K ST +++++
Sbjct: 183 SSK-SDVWSFGVLMWE-VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH 240
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 19 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 72
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 133 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 186 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 240
Query: 265 L 265
+
Sbjct: 241 M 241
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 76
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 137 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 190 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 244
Query: 265 L 265
+
Sbjct: 245 M 245
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 17 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 70
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 131 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 184 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 238
Query: 265 L 265
+
Sbjct: 239 M 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 23/270 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 245
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 306 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P PE +L+
Sbjct: 359 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 265 L-SPVQTRPR---LKTIAEDRWLKPKPKSR 290
+ RP L+ ED + +P+ +
Sbjct: 418 WRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 447
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 245
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 306 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P PE +L+
Sbjct: 359 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 265 L-SPVQTRPR---LKTIAEDRWLKPKPK 288
+ RP L+ ED + +P+
Sbjct: 418 WRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 35/279 (12%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYL-KKFLPREIEVVKGLKHPNLIR 86
+ +G G + V A++ + AIK +++ P L ++ + RE++ + L+HP ++R
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIK---RIRLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 87 FLQAI---ETTHRV---------YIIMEYAENGSLFDIIRGQGYIDEIRAR----RWFGQ 130
+ A TT ++ YI M+ +L D + G+ I+E R R F Q
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE-RERSVCLHIFLQ 126
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC- 189
+ EA+++ H +G++HRD+K N+ D +K+ DFG A + + +
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 190 -----GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVN-ELLKQVQN 243
G+ Y SPE + G Y+ H DI+S+G++LF +++ PF L V+N
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRN 242
Query: 244 KVTFPKQPEVSTECKE-LISNILSPV-QTRPRLKTIAED 280
+ FP C+ ++ ++LSP RP I E+
Sbjct: 243 -LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 15 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 68
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 129 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 182 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 236
Query: 265 L 265
+
Sbjct: 237 M 237
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 275 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 328
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 389 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 442 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 496
Query: 265 L 265
+
Sbjct: 497 M 497
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 121/237 (51%), Gaps = 15/237 (6%)
Query: 14 RKVTVLESHGYTVGKIIGTGSYATVKLARS---TRHSGDVAIKIVSKVQ-APPDYLKKFL 69
R T E + +G G++ +V++ R ++G+V V K+Q + ++L+ F
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA--VKKLQHSTEEHLRDF- 59
Query: 70 PREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARR 126
REIE++K L+H N++++ + R + +IMEY GSL D + + + ID I+ +
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
+ Q+ + ++Y + +HR++ N+L++++ +K+ DFG + + + E
Sbjct: 120 YTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
+ YA PE L ++ SD+WS GVVL+ + F + S E ++ + N
Sbjct: 180 SPIFWYA---PESLTESKFSV-ASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMIGN 231
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 16 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMK 73
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 194 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 247 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 23/270 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 245
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 306 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P PE +L+
Sbjct: 359 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 265 L-SPVQTRPR---LKTIAEDRWLKPKPKSR 290
+ RP L+ ED + +P+ +
Sbjct: 418 WRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 447
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMK 88
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 148
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 209 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMK 88
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSL-------------FDIIRGQGYIDEIR 123
+ KH N+I L A +Y+I+EYA G+L F +++
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 209 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 29/262 (11%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+ IG G + V L VA+K + +L E V+ L+H NL++
Sbjct: 18 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 70
Query: 88 LQAI-ETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVV 144
L I E +YI+ EY GSL D +R +G + ++ + EA++Y V
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ N+L+ D K+SDFG + +S +T + +PE L+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEA---------SSTQDTGKLPVKWTAPEALREAA 181
Query: 205 YAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTF-------PKQPEVSTE 256
++ SD+WS G++L+ + FGR+P+ + +++ +V+ P EV
Sbjct: 182 FSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKN 240
Query: 257 CKELISNIL-SPVQTRPRLKTI 277
C L + + S +Q R +L+ I
Sbjct: 241 CWHLDAAMRPSFLQLREQLEHI 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 193 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 246
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG R DN + + + +PE +
Sbjct: 307 LRAANILVGENLVCKVADFGLGRL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 360 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 414
Query: 265 LSPV-----QTRPR---LKTIAEDRWLKPKPKSR 290
+ + RP L+ ED + +P+ +
Sbjct: 415 MCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQ 448
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K ++H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKIRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 19 LESHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
L++ + ++IG G + V +L + VAIK + KV + FL E +
Sbjct: 40 LDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL-KVGYTEKQRRDFLC-EASI 97
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEA 134
+ HPN++ + V I++E+ ENG+L +R G I+ +
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS--- 191
++Y + G VHRD+ N+L++S+ K+SDFG +R D T G
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV------IEDDPEAVYTTTGGKIP 211
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQ 250
+ +PE +Q + SD+WS G+V++ M +G P+ D S +++K ++ P
Sbjct: 212 VRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAP 270
Query: 251 PEVSTECKELISNILSPVQT-RPRLKTI 277
+ +L+ + + RP+ + I
Sbjct: 271 MDCPAGLHQLMLDCWQKERAERPKFEQI 298
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 27 GKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
G+++G G + + + R +G+V + + ++ + + FL +E++V++ L+HPN+++
Sbjct: 15 GEVLGKGCFGQA-IKVTHRETGEVMV-MKELIRFDEETQRTFL-KEVKVMRCLEHPNVLK 71
Query: 87 FLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ-LLEALQYCHERGVVH 145
F+ + R+ I EY + G+L II+ R F + + + Y H ++H
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNA--------ADNSLSETFCGSYAYASP 197
RD+ N L+ + N+ ++DFG AR + ++ D T G+ + +P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
E++ G Y + D++S G+VL ++ GR+ D
Sbjct: 192 EMINGRSYDEKV-DVFSFGIVLCEII-GRVNAD 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 37/272 (13%)
Query: 22 HGYTVG------KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
HG+ +G K +G G V A VAIK + V P +K L REI++
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHAL-REIKI 61
Query: 76 VKGLKHPNLIRFLQ--------------AIETTHRVYIIMEYAENGSLFDIIRGQGYIDE 121
++ L H N+++ + ++ + VYI+ EY E L +++ QG + E
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLE-QGPLLE 119
Query: 122 IRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS-DYNIKLSDFGFARAHMRCRSNAA 180
AR + QLL L+Y H V+HRD+K NL +++ D +K+ DFG AR S+
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG 179
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQ 240
LSE + Y SP +L D+W+ G + M+ G+ F + +EL
Sbjct: 180 --HLSEGLVTKW-YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF--AGAHEL--- 231
Query: 241 VQNKVTFPKQPEVSTECK-ELISNILSPVQTR 271
Q ++ P V E + EL+S I PV R
Sbjct: 232 EQMQLILESIPVVHEEDRQELLSVI--PVYIR 261
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 12/236 (5%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
YT IG G+Y V A + VAIK +S + Y ++ L REI+++ +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHEN 102
Query: 84 LIRF-----LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+I IE VY++ + L+ +++ Q ++ + Q+L L+Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H V+HRD+K NLLL++ ++K+ DFG AR + + + Y +PE
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPE 217
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
I+ DIWS+G +L M+ R F + L + + P Q +++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 273
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMK 88
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 209 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
+ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LAAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMK 88
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 209 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 23 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMK 80
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 81 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 140
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 141 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 201 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 254 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 297
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 20 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMK 77
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 78 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 138 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 198 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 251 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 294
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 66
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII+E+ G+L D +R + ++ + Q+ A++
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 127 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-----KWTA 181
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 182 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 228
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVK 77
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 24 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMK 81
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIR 123
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++
Sbjct: 82 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 124 ARRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
++ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 142 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 202 TTNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 255 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 298
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 63
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII+E+ G+L D +R + + + Q+ A++
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 124 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-----KWTA 178
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 179 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGD-------VAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+GK +G G++ V LA + D VA+K++ D L E+E++K
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--LISEMEMMKM 130
Query: 79 L-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIRA 124
+ KH N+I L A +Y+I+EYA G+L + ++ G Y +++ +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 125 RRWFG---QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSNA 179
+ Q+ ++Y + +HRD+ N+L+ D +K++DFG AR H+
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 180 ADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNELL 238
+ L + +PE L Y H SD+WS GV+L+ + G P+ V EL
Sbjct: 251 TNGRL------PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
Query: 239 KQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 304 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 79
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + +YI+ EY G L D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL-------IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 193 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 247
Query: 265 L 265
+
Sbjct: 248 M 248
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 22/231 (9%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII+E+ G+L D +R + ++ + Q+ A++
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYA 193
Y ++ +HRD+ N L+ ++ +K++DFG +R A + T S A
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
Y I SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 191 YNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 29/262 (11%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+ IG G + V L VA+K + +L E V+ L+H NL++
Sbjct: 12 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 64
Query: 88 LQAI-ETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVV 144
L I E +YI+ EY GSL D +R +G + ++ + EA++Y V
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIP 204
HRD+ N+L+ D K+SDFG + +S +T + +PE L+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEA---------SSTQDTGKLPVKWTAPEALREKK 175
Query: 205 YAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTF-------PKQPEVSTE 256
++ SD+WS G++L+ + FGR+P+ + +++ +V+ P EV
Sbjct: 176 FSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKN 234
Query: 257 CKELISNIL-SPVQTRPRLKTI 277
C L + + S +Q R +L+ I
Sbjct: 235 CWHLDAAMRPSFLQLREQLEHI 256
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 55/293 (18%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG------- 129
+ KH N+I L A +Y+I+EYA G+L + +R ARR G
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR---------ARRPPGMEXSYDI 146
Query: 130 ------------------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR- 170
QL ++Y + +HRD+ N+L+ + +K++DFG AR
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 171 -AHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLP 228
++ + L + +PE L Y H SD+WS GV+++ + G P
Sbjct: 207 INNIDXXKKTTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSP 259
Query: 229 FDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
+ V EL K ++ K + E ++ + V + RP K + ED
Sbjct: 260 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 26 VGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
+ ++IG G + V L + VAIK + K + FL E ++ HP
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFL-SEASIMGQFDHP 94
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHER 141
N+I + + V II E+ ENGSL +R G I+ + ++Y +
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEI 199
VHRD+ N+L++S+ K+SDFG +R + +D + + G + +PE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRF---LEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 200 LQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
+Q + SD+WS G+V++ M +G P+ D + +++ ++ P + +
Sbjct: 212 IQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH 270
Query: 259 ELI 261
+L+
Sbjct: 271 QLM 273
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G + V +A + + + VA+K++ D L E+E++K
Sbjct: 27 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 84
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 205 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 257
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 258 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G + V +A + + + VA+K++ D L E+E++K
Sbjct: 25 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 82
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 203 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 255
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 256 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G + V +A + + + VA+K++ D L E+E++K
Sbjct: 30 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 87
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 208 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 260
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 261 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 304
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 22/231 (9%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V + ++S VA+K + + +++FL +E V+K
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 84
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YI+ EY G+L D +R + + + Q+ A++
Sbjct: 85 IKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAME 144
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYA 193
Y ++ +HRD+ N L+ ++ +K++DFG +R A + T S A
Sbjct: 145 YLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
Y + I SD+W+ GV+L+ + +G P+ D S V +LL++
Sbjct: 205 YNTFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEK 246
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-----KWTA 185
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 186 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G + V +A + + + VA+K++ D L E+E++K
Sbjct: 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 141
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 262 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 66
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 127 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-----KWTA 181
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 182 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+EYA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + ++++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 67
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-----KWTA 182
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 183 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYA 193
Y ++ +HRD+ N L+ ++ +K++DFG +R A + T S A
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
Y I SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 191 YNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYA 193
Y ++ +HRD+ N L+ ++ +K++DFG +R A + T S A
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
Y I SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 191 YNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 15/237 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSG--DVAIKIVSKVQAPPDYLKKFLPREIEVV 76
+E+ + KIIG+G V R R G DV + I + + ++ E ++
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGR-LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR---GQGYIDEIRAR-RWFGQLL 132
HPN+IR + I+ EY ENGSL +R GQ I ++ R G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA-- 162
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
++Y + G VHRD+ N+L+DS+ K+SDFG +R + +AA +
Sbjct: 163 -GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-LEDDPDAAXTTTGGKI--PI 218
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
+ +PE + ++ SD+WS GVV++ + +G P+ + + +++ V+ P
Sbjct: 219 RWTAPEAIAFRTFS-SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP 274
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-----KWTA 180
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 181 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 69
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 129
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYA 193
Y ++ +HRD+ N L+ ++ +K++DFG +R A + T S A
Sbjct: 130 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
Y I SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 190 YNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 231
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 78
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 79 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 138
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 139 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-----KWTA 193
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 194 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 240
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 28/234 (11%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 63
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + + + Q+ A++
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--- 193
Y ++ +HRD+ N L+ ++ +K++DFG +R +TF
Sbjct: 124 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-----------GDTFTAHAGAKF 172
Query: 194 ---YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
+ +PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 173 PIKWTAPESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII+E+ G+L D +R + + + Q+ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 180
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 181 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 67
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 182
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 183 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 67
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 182
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 183 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 26 VGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+ K+IG G + V R ++ + I + D ++ E ++ HPN+
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHERGV 143
I + V II EY ENGSL +R G I+ + ++Y +
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+ N+L++S+ K+SDFG +R + AA + + +PE +
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAAYTTRGGKI--PIRWTAPEAIAYR 209
Query: 204 PYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
+ SD+WS G+V++ M +G P+ D S +++K ++ P
Sbjct: 210 KFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 254
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + ++ + Q+ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 180
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 181 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII+E+ G+L D +R + + + Q+ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 180
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 181 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 30 IGTGSYATVKLARSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLK---HPNLI 85
IG G+Y TV AR HSG VA+K V +V + L RE+ +++ L+ HPN++
Sbjct: 12 IGVGAYGTVYKARDP-HSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 86 RFLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
R + T+ +V ++ E+ + + D G E + Q L L +
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRGLDFL 128
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H +VHRD+K EN+L+ S +KL+DFG AR + + +L+ + Y +PE
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIY------SYQMALAPVVVTLW-YRAPE 181
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
+L YA + D+WS+G + FA +F R P F +S + L ++ + + P +
Sbjct: 182 VLLQSTYATPV-DMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G + V + + + VAIK + P+ FL +E +V+K L+H L++ L
Sbjct: 16 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ-LY 69
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQG--YIDEIRARRWFGQLLEALQYCHERGVVHRD 147
A+ + + I+ EY GSL D ++G+ Y+ + Q+ + Y VHRD
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGIPY 205
++ N+L+ + K++DFG AR DN + + + +PE +
Sbjct: 130 LRAANILVGENLVCKVADFGLARL-------IEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 206 APHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNI 264
SD+WS G++L + GR+P+ E+L QV+ P P EC E + ++
Sbjct: 183 TIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDL 237
Query: 265 L 265
+
Sbjct: 238 M 238
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 111/226 (49%), Gaps = 17/226 (7%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G++IG G + V R G+VAI+++ + D LK F RE+ + +H N++
Sbjct: 37 IGELIGKGRFGQV---YHGRWHGEVAIRLIDIERDNEDQLKAF-KREVMAYRQTRHENVV 92
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ-LLEALQYCHERGVV 144
F+ A + + II + +L+ ++R + ++ R Q +++ + Y H +G++
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGIL 152
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ--- 201
H+D+K +N+ D+ + ++DFG ++ ++ L G + +PEI++
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKL-RIQNGWLCHLAPEIIRQLS 210
Query: 202 ------GIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQV 241
+P++ H SD++++G + + + PF ++ Q+
Sbjct: 211 PDTEEDKLPFSKH-SDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVS----KVQAPPDYLKKFLPREIEVVKGLKHPN 83
K +G G + V + +S VA+K + VQA FL E ++K L+H
Sbjct: 19 KRLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQA-------FL-EEANLMKTLQHDK 69
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHER 141
L+R + +YII EY GSL D ++ G + + + Q+ E + Y +
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEI 199
+HRD++ N+L+ K++DFG AR DN + + + +PE
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARV-------IEDNEYTAREGAKFPIKWTAPEA 182
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPK 249
+ + SD+WS G++L+ +V +G++P+ + +++ + P+
Sbjct: 183 INFGCFTIK-SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPR 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 26 VGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+ K+IG G + V R ++ + I + D ++ E ++ HPN+
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHERGV 143
I + V II EY ENGSL +R G I+ + ++Y +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGI 203
VHRD+ N+L++S+ K+SDFG +R + AA + + +PE +
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAAYTTRGGKI--PIRWTAPEAIAYR 188
Query: 204 PYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
+ SD+WS G+V++ M +G P+ D S +++K ++ P
Sbjct: 189 KFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 26 VGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+ K+IG G + V R ++ + I + D ++ E ++ HPN+
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHERGV 143
I + V II EY ENGSL +R G I+ + ++Y +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS---YAYASPEIL 200
VHRD+ N+L++S+ K+SDFG +R D + T G + +PE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 201 QGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
+ SD+WS G+V++ M +G P+ D S +++K ++ P
Sbjct: 192 AYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 3 DSTVQVQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPP 62
DS + D+ID + + + +++G G+Y V R + AIK++
Sbjct: 5 DSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE 64
Query: 63 DYLKKFLPREIEVVKGLKHP-NLIRFLQAIETTH------RVYIIMEYAENGSLFDIIRG 115
+ +K+ EI ++K H N+ + A + +++++ME+ GS+ D+I+
Sbjct: 65 EEIKQ----EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120
Query: 116 QGYIDEIRARRWFG----QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARA 171
W ++L L + H+ V+HRDIK +N+LL + +KL DFG +
Sbjct: 121 TK--GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 172 HMRC--RSNAADNSLSETFCGSYAYASPEIL--QGIPYAPH--LSDIWSMGVVLFAMVFG 225
R R N TF G+ + +PE++ P A + SD+WS+G+ M G
Sbjct: 179 LDRTVGRRN--------TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
Query: 226 RLPF-DDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAEDRWL 283
P D + L +N K + S + + I + L + RP + + + ++
Sbjct: 231 APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
Query: 284 KPKPKSRGVDKAEAELDHYIDMIQTSASSTD 314
+ +P R V +L +ID + D
Sbjct: 291 RDQPNERQV---RIQLKDHIDRTKKKRGEKD 318
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 22/232 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK---HPNLIR 86
IG G+Y TV AR VA+K V +V + L RE+ +++ L+ HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 87 FLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
+ T+ +V ++ E+ + + D G E + Q L L + H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRGLDFLH 129
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+VHRD+K EN+L+ S +KL+DFG AR + A D + + Y +PE+
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLW-----YRAPEV 182
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
L YA + D+WS+G + FA +F R P F +S + L ++ + + P +
Sbjct: 183 LLQSTYATPV-DMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 15/237 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSG--DVAIKIVSKVQAPPDYLKKFLPREIEVV 76
+E+ + KIIG+G V R R G DV + I + + ++ E ++
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGR-LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 77 KGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR---GQGYIDEIRAR-RWFGQLL 132
HPN+IR + I+ EY ENGSL +R GQ I ++ R G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA-- 162
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
++Y + G VHRD+ N+L+DS+ K+SDFG +R + +AA +
Sbjct: 163 -GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-LEDDPDAAYTTTGGKI--PI 218
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFP 248
+ +PE + ++ SD+WS GVV++ + +G P+ + + +++ V+ P
Sbjct: 219 RWTAPEAIAFRTFS-SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP 274
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE---IEV 75
L + ++V +IIG G + V R A+K + K + + E + +
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
V P ++ A T ++ I++ G L + G E R + +++ L
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
++ H R VV+RD+K N+LLD ++++SD G A + + +A+ G++ Y
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYM 356
Query: 196 SPEILQ-GIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+PE+LQ G+ Y +D +S+G +LF ++ G PF
Sbjct: 357 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPF 390
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + + + Q+ A++
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 130
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYA 193
Y ++ +HRD+ N L+ ++ +K++DFG +R A + T S A
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
Y I SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 191 YNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE---IEV 75
L + ++V +IIG G + V R A+K + K + + E + +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
V P ++ A T ++ I++ G L + G E R + +++ L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
++ H R VV+RD+K N+LLD ++++SD G A + + +A+ G++ Y
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYM 357
Query: 196 SPEILQ-GIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+PE+LQ G+ Y +D +S+G +LF ++ G PF
Sbjct: 358 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPF 391
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + + + Q+ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 180
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 181 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 27/266 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + VAIKI+++ P ++ F+ E ++ + HP+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FM-DEALIMASMDHPH 101
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
L+R L + + + ++ + +G L + + + D I ++ W Q+ + + Y E
Sbjct: 102 LVRLL-GVCLSPTIQLVTQLMPHGCLLEYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHM--RCRSNAADNSLSETFCGSYAYASPE 198
R +VHRD+ N+L+ S ++K++DFG AR NA + +
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA-------- 210
Query: 199 ILQGIPYA--PHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVST 255
L+ I Y H SD+WS GV ++ M FG P+D E+ ++ P+ P +
Sbjct: 211 -LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTI 269
Query: 256 EC-KELISNILSPVQTRPRLKTIAED 280
+ ++ + +RP+ K +A +
Sbjct: 270 DVYMVMVKCWMIDADSRPKFKELAAE 295
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+ YA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G Y V ++S VA+K + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + + + Q+ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R M + A + +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPI----KWTA 180
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 181 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE---IEV 75
L + ++V +IIG G + V R A+K + K + + E + +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
V P ++ A T ++ I++ G L + G E R + +++ L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
++ H R VV+RD+K N+LLD ++++SD G A + + +A+ G++ Y
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYM 357
Query: 196 SPEILQ-GIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+PE+LQ G+ Y +D +S+G +LF ++ G PF
Sbjct: 358 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPRE---IEV 75
L + ++V +IIG G + V R A+K + K + + E + +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL 135
V P ++ A T ++ I++ G L + G E R + +++ L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYA 195
++ H R VV+RD+K N+LLD ++++SD G A + + +A+ G++ Y
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--------VGTHGYM 357
Query: 196 SPEILQ-GIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+PE+LQ G+ Y +D +S+G +LF ++ G PF
Sbjct: 358 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPF 391
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 27/266 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + VAIKI+++ P ++ F+ E ++ + HP+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FM-DEALIMASMDHPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
L+R L + + + ++ + +G L + + + D I ++ W Q+ + + Y E
Sbjct: 79 LVRLL-GVCLSPTIQLVTQLMPHGCLLEYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHM--RCRSNAADNSLSETFCGSYAYASPE 198
R +VHRD+ N+L+ S ++K++DFG AR NA + +
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA-------- 187
Query: 199 ILQGIPYA--PHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVST 255
L+ I Y H SD+WS GV ++ M FG P+D E+ ++ P+ P +
Sbjct: 188 -LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTI 246
Query: 256 EC-KELISNILSPVQTRPRLKTIAED 280
+ ++ + +RP+ K +A +
Sbjct: 247 DVYMVMVKCWMIDADSRPKFKELAAE 272
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 27/266 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--------PPDYLKKFLPREIEV 75
YTV + I +GSY V A VAIK V + +L K + REI +
Sbjct: 24 YTVQRFISSGSYGAV-CAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 76 VKGLKHPNLIR----FLQAIE-TTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG- 129
+ HPN++ F+ E H++Y++ E L +I Q + + ++F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMY 141
Query: 130 QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
+L L HE GVVHRD+ N+LL + +I + DF A R + AD + +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA------REDTADANKTHYVT 195
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
+ Y +PE++ L D+WS G V+ M + F S+ L ++ V PK
Sbjct: 196 HRW-YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 250 QPEV----STECKELISNILSPVQTR 271
+V S ++ + N LS V R
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 30 IGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G G++ +V+ + R + DVAIK++ + D + + RE +++ L +P ++R
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD--TEEMMREAQIMHQLDNPYIVRL 75
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI---RARRWFGQLLEALQYCHERGVV 144
+ + + ++ME A G L + G+ +EI Q+ ++Y E+ V
Sbjct: 76 I-GVCQAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQG 202
HRD+ N+LL + + K+SDFG ++A A D+ + G + + +PE +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKA-----LGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 203 IPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELI 261
++ SD+WS GV ++ A+ +G+ P+ E++ ++ PE E L+
Sbjct: 188 RKFSSR-SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALM 246
Query: 262 SNI-LSPVQTRPRLKTIAE 279
S+ + + RP T+ +
Sbjct: 247 SDCWIYKWEDRPDFLTVEQ 265
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 27/266 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQA--------PPDYLKKFLPREIEV 75
YTV + I +GSY V A VAIK V + +L K + REI +
Sbjct: 24 YTVQRFISSGSYGAV-CAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 76 VKGLKHPNLIR----FLQAIE-TTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG- 129
+ HPN++ F+ E H++Y++ E L +I Q + + ++F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMY 141
Query: 130 QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
+L L HE GVVHRD+ N+LL + +I + DF A R + AD + +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA------REDTADANKTHYVT 195
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPK 249
+ Y +PE++ L D+WS G V+ M + F S+ L ++ V PK
Sbjct: 196 HRW-YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 250 QPEV----STECKELISNILSPVQTR 271
+V S ++ + N LS V R
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + +IG GSY V LA +VAIK V+++ K+ L REI ++ LK
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL-REITILNRLKSD 85
Query: 83 NLIRFLQAI-----ETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+IR I +YI++E A+ L + + ++ E + LL +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE----------- 186
HE G++HRD+K N LL+ D ++K+ DFG AR + N L E
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 187 -----TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRL 227
+ + Y +PE++ DIWS G + FA + L
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCI-FAELLNML 249
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 25 TVGKIIGTGSYATVKLARST-------RHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
T+GK +G G++ V +A + + + VA+K++ D L E+E++K
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMK 95
Query: 78 GL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYIDEI----RARRW 127
+ KH N+I L A +Y+I+ YA G+L + +R G Y +I +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 128 FG-------QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRSN 178
F QL ++Y + +HRD+ N+L+ + +K++DFG AR ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 179 AADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPFDDSSVNEL 237
+ L + +PE L Y H SD+WS GV+++ + G P+ V EL
Sbjct: 216 TTNGRL------PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 238 LKQVQNKVTFPKQPEVSTECKELISNILSPVQT-RPRLKTIAED 280
K ++ K + E ++ + V + RP K + ED
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 19 LESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG 78
+E T+ +G G + V ++S VA+K + + +++FL +E V+K
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 63
Query: 79 LKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQ 136
+KHPNL++ L YII E+ G+L D +R + + + Q+ A++
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYAS 196
Y ++ +HRD+ N L+ ++ +K++DFG +R A + + +
Sbjct: 124 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-----KWTA 178
Query: 197 PEILQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
PE L ++ SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 179 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSL----FDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
++ A ET + ++M G + +++ E RA + Q++ L++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+R +++RD+K EN+LLD D N+++SD G A ++ A + ++ + G+ + +PE+
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELK-----AGQTKTKGYAGTPGFMAPEL 360
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQ--VQNKVTFPKQ--PE 252
L G Y + D +++GV L+ M+ R PF + N+ LKQ ++ VT+P + P
Sbjct: 361 LLGEEYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 253 VSTECKELISN 263
C+ L+
Sbjct: 420 SKDFCEALLQK 430
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSL----FDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
++ A ET + ++M G + +++ E RA + Q++ L++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+R +++RD+K EN+LLD D N+++SD G A ++ A + ++ + G+ + +PE+
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELK-----AGQTKTKGYAGTPGFMAPEL 360
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQ--VQNKVTFPKQ--PE 252
L G Y + D +++GV L+ M+ R PF + N+ LKQ ++ VT+P + P
Sbjct: 361 LLGEEYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 253 VSTECKELISN 263
C+ L+
Sbjct: 420 SKDFCEALLQK 430
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSL----FDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
++ A ET + ++M G + +++ E RA + Q++ L++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+R +++RD+K EN+LLD D N+++SD G A ++ A + ++ + G+ + +PE+
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELK-----AGQTKTKGYAGTPGFMAPEL 360
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQ--VQNKVTFPKQ--PE 252
L G Y + D +++GV L+ M+ R PF + N+ LKQ ++ VT+P + P
Sbjct: 361 LLGEEYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 253 VSTECKELISN 263
C+ L+
Sbjct: 420 SKDFCEALLQK 430
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 22/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G++ V AR + VA+K V + L REI++++ LKH N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHENVVNLIE 84
Query: 90 AIETTHR--------VYIIMEYAEN--GSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
T +Y++ ++ E+ L + + + EI+ R LL L Y H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIH 142
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
++HRD+K N+L+ D +KL+DFG ARA +++ + + + Y PE+
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 200
Query: 200 LQG-IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNE----LLKQVQNKVTFPKQPEVS 254
L G Y P + D+W G ++ A ++ R P + + L+ Q+ +T P V
Sbjct: 201 LLGERDYGPPI-DLWGAGCIM-AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 255 T 255
Sbjct: 259 N 259
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSL----FDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
++ A ET + ++M G + +++ E RA + Q++ L++ H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
+R +++RD+K EN+LLD D N+++SD G A ++ A + ++ + G+ + +PE+
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELK-----AGQTKTKGYAGTPGFMAPEL 360
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF---DDSSVNELLKQ--VQNKVTFPKQ--PE 252
L G Y + D +++GV L+ M+ R PF + N+ LKQ ++ VT+P + P
Sbjct: 361 LLGEEYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 253 VSTECKELISN 263
C+ L+
Sbjct: 420 SKDFCEALLQK 430
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 22/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G++ V AR + VA+K V + L REI++++ LKH N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHENVVNLIE 84
Query: 90 AIETTHR--------VYIIMEYAEN--GSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
T +Y++ ++ E+ L + + + EI+ R LL L Y H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIH 142
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
++HRD+K N+L+ D +KL+DFG ARA +++ + + + Y PE+
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 200
Query: 200 LQG-IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNE----LLKQVQNKVTFPKQPEVS 254
L G Y P + D+W G ++ A ++ R P + + L+ Q+ +T P V
Sbjct: 201 LLGERDYGPPI-DLWGAGCIM-AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 255 T 255
Sbjct: 259 N 259
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G++ V AR + VA+K V + L REI++++ LKH N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHENVVNLIE 84
Query: 90 AIETTHR--------VYIIMEYAEN--GSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
T +Y++ ++ E+ L + + + EI+ R LL L Y H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIH 142
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
++HRD+K N+L+ D +KL+DFG ARA +++ + + + Y PE+
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 200
Query: 200 LQG-IPYAPHLSDIWSMGVVLFAM 222
L G Y P + D+W G ++ M
Sbjct: 201 LLGERDYGPPI-DLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 22/241 (9%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG G++ V AR + VA+K V + L REI++++ LKH N++ ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHENVVNLIE 83
Query: 90 AIETTHR--------VYIIMEYAEN--GSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
T +Y++ ++ E+ L + + + EI+ R LL L Y H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIH 141
Query: 140 ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
++HRD+K N+L+ D +KL+DFG ARA +++ + + + Y PE+
Sbjct: 142 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPEL 199
Query: 200 LQG-IPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNE----LLKQVQNKVTFPKQPEVS 254
L G Y P + D+W G ++ A ++ R P + + L+ Q+ +T P V
Sbjct: 200 LLGERDYGPPI-DLWGAGCIM-AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 255 T 255
Sbjct: 258 N 258
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 30 IGTGSYATVKLARSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLK---HPNLI 85
IG G+Y TV AR HSG VA+K V +V + L RE+ +++ L+ HPN++
Sbjct: 12 IGVGAYGTVYKARDP-HSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 86 RFLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
R + T+ +V ++ E+ + + D G E + Q L L +
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRGLDFL 128
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
H +VHRD+K EN+L+ S +KL+DFG AR + + +L + Y +PE
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIY------SYQMALFPVVVTLW-YRAPE 181
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
+L YA + D+WS+G + FA +F R P F +S + L ++ + + P +
Sbjct: 182 VLLQSTYATPV-DMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + +IGTGSY V A VAIK + +V K+ L REI ++ L H +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL-REIAILNRLNHDH 113
Query: 84 LIRFL-----QAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
+++ L + +E +Y+++E A++ + R Y+ E+ + LL ++Y
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARA 171
H G++HRD+K N L++ D ++K+ DFG AR
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLART 205
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y + + +G G + V T K V KV+ L K +EI ++ +H N
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVK---KEISILNIARHRN 62
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGY-IDEIRARRWFGQLLEALQYCHERG 142
++ ++ E+ + +I E+ +F+ I + ++E + Q+ EALQ+ H
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 143 VVHRDIKCENLLLDS--DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
+ H DI+ EN++ + IK+ +FG AR + DN F YA PE+
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQAR-----QLKPGDN-FRLLFTAPEYYA-PEVH 175
Query: 201 QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN-KVTFPKQP--EVSTEC 257
Q +D+WS+G +++ ++ G PF + ++++ + N + TF ++ E+S E
Sbjct: 176 QH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 258 KELISNILSPVQTRPRLKTIAEDR---WLKPK 286
+ + +L V+ R T +E WLK K
Sbjct: 235 MDFVDRLL--VKERKSRMTASEALQHPWLKQK 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 19/239 (7%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
K +G G + V + ++ VAIK + P+ FL E +++K LKH L++
Sbjct: 15 KRLGNGQFGEVWMGTWNGNT-KVAIKTLKPGTMSPE---SFL-EEAQIMKKLKHDKLVQ- 68
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEI-RARRWFGQLLEALQYCHERGVVH 145
L A+ + +YI+ EY GSL D ++ G+G ++ Q+ + Y +H
Sbjct: 69 LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH 128
Query: 146 RDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQGI 203
RD++ N+L+ + K++DFG AR DN + + + +PE
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARL-------IEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 204 PYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELI 261
+ SD+WS G++L +V GR+P+ + E+L+QV+ P + EL+
Sbjct: 182 RFTIK-SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELM 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T+ +G G Y V ++S VA+K + + +++FL +E V+K +KHPNL
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKEIKHPNL 275
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQYCHERG 142
++ L YII E+ G+L D +R + ++ + Q+ A++Y ++
Sbjct: 276 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 335
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYAYASPEI 199
+HR++ N L+ ++ +K++DFG +R A + T S AY I
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 200 LQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 396 ---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 431
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T+ +G G Y V ++S VA+K + + +++FL +E V+K +KHPNL
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKEIKHPNL 317
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQYCHERG 142
++ L YII E+ G+L D +R + ++ + Q+ A++Y ++
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYAYASPEI 199
+HR++ N L+ ++ +K++DFG +R A + T S AY I
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 200 LQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 438 ---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 473
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ + + +GTG + V VAIK + +P + + L EI+++K L HPN
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL--EIQIMKKLNHPN 74
Query: 84 LIRF------LQAIETTHRVYIIMEYAENGSL---FDIIRGQGYIDEIRARRWFGQLLEA 134
++ LQ + + MEY E G L + + E R + A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNI---KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
L+Y HE ++HRD+K EN++L K+ D G+A+ L F G+
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-------ELDQGELCTEFVGT 187
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
Y +PE+L+ Y + D WS G + F + G PF
Sbjct: 188 LQYLAPELLEQKKYTVTV-DYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
+ + + +GTG + V VAIK + +P + + L EI+++K L HPN
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL--EIQIMKKLNHPN 73
Query: 84 LIRF------LQAIETTHRVYIIMEYAENGSL---FDIIRGQGYIDEIRARRWFGQLLEA 134
++ LQ + + MEY E G L + + E R + A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNI---KLSDFGFARAHMRCRSNAADNSLSETFCGS 191
L+Y HE ++HRD+K EN++L K+ D G+A+ L F G+
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-------ELDQGELCTEFVGT 186
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
Y +PE+L+ Y + D WS G + F + G PF
Sbjct: 187 LQYLAPELLEQKKYTVTV-DYWSFGTLAFECITGFRPF 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 29/237 (12%)
Query: 30 IGTGSYATVKLARSTRHSGD-VAIKIVSKVQAPPDYLKKFLP----REIEVVKGLK---H 81
IG G+Y TV AR HSG VA+K V LP RE+ +++ L+ H
Sbjct: 17 IGVGAYGTVYKARDP-HSGHFVALKSVRVPNG--GGGGGGLPISTVREVALLRRLEAFEH 73
Query: 82 PNLIRFLQAIETTH-----RVYIIMEYAENG--SLFDIIRGQGYIDEIRARRWFGQLLEA 134
PN++R + T+ +V ++ E+ + + D G E + Q L
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRG 132
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
L + H +VHRD+K EN+L+ S +KL+DFG AR + + +L+ + Y
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY------SYQMALTPVVVTLW-Y 185
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLP-FDDSSVNELLKQVQNKVTFPKQ 250
+PE+L YA + D+WS+G + FA +F R P F +S + L ++ + + P +
Sbjct: 186 RAPEVLLQSTYATPV-DMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 26 VGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
+ ++IG G + V L + VAIK + K + FL E ++ HP
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFL-SEASIMGQFDHP 68
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHER 141
N+I + + V II E+ ENGSL +R G I+ + ++Y +
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEI 199
VHR + N+L++S+ K+SDFG +R + +D + + G + +PE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRF---LEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 200 LQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
+Q + SD+WS G+V++ M +G P+ D + +++ ++ P + +
Sbjct: 186 IQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH 244
Query: 259 ELI 261
+L+
Sbjct: 245 QLM 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 26/243 (10%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVS----KVQAPPDYLKKFLPREIEVVKGLKHPN 83
K +G G + V + +S VA+K + VQA FL E ++K L+H
Sbjct: 18 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQA-------FL-EEANLMKTLQHDK 68
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ--GYIDEIRARRWFGQLLEALQYCHER 141
L+R + +YII E+ GSL D ++ G + + + Q+ E + Y +
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEI 199
+HRD++ N+L+ K++DFG AR DN + + + +PE
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARV-------IEDNEYTAREGAKFPIKWTAPEA 181
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
+ + S++WS G++L+ +V +G++P+ + +++ + P+ E
Sbjct: 182 INFGCFTIK-SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY 240
Query: 259 ELI 261
+++
Sbjct: 241 DIM 243
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH-P 82
Y + + +G G Y+ V A + ++ V +KI+ V+ K + REI++++ L+ P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLRGGP 92
Query: 83 NLIRFLQAIE--TTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHE 140
N+I ++ + ++ E+ N + + + + R + ++L+AL YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHS 149
Query: 141 RGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEI 199
G++HRD+K N+++D ++ ++L D+G A + + S + PE+
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-------YNVRVASRYFKGPEL 202
Query: 200 LQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
L + D+WS+G +L +M+F + PF
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
T+ +G G Y V ++S VA+K + + +++FL +E V+K +KHPNL
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKEIKHPNL 278
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR--GQGYIDEIRARRWFGQLLEALQYCHERG 142
++ L YII E+ G+L D +R + + + Q+ A++Y ++
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFAR---AHMRCRSNAADNSLSETFCGSYAYASPEI 199
+HR++ N L+ ++ +K++DFG +R A + T S AY I
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 200 LQGIPYAPHLSDIWSMGVVLFAM-VFGRLPF---DDSSVNELLKQ 240
SD+W+ GV+L+ + +G P+ D S V ELL++
Sbjct: 399 ---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 434
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 23 GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHP 82
Y + +IG GSY V LA + +VAIK V+++ K+ L REI ++ LK
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL-REITILNRLKSD 87
Query: 83 NLIRFLQAI-----ETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQY 137
+IR I +YI++E A+ L + + ++ E + LL ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 138 CHERGVVHRDIKCENLLLDSDYNIKLSDFGFARA 171
HE G++HRD+K N LL+ D ++K+ DFG AR
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLART 180
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 16 VTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
+ ++++ Y + +G G ++ V L A+K ++ ++ RE ++
Sbjct: 23 MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALK---RILCHEQQDREEAQREADM 79
Query: 76 VKGLKHPNLIRF----LQAIETTHRVYIIMEYAENGSLFDII---RGQG-YIDEIRARRW 127
+ HPN++R L+ H ++++ + + G+L++ I + +G ++ E +
Sbjct: 80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 128 FGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGF---ARAHMR-CRSNAADNS 183
+ L+ H +G HRD+K N+LL + L D G A H+ R
Sbjct: 140 LLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 184 LSETFCGSYAYASPEI--LQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD--SSVNELLK 239
+ C + +Y +PE+ +Q +D+WS+G VL+AM+FG P+D + +
Sbjct: 200 WAAQRC-TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258
Query: 240 QVQNKVTFPKQPEVSTECKELISNILS 266
VQN+++ P+ P S+ +L++++++
Sbjct: 259 AVQNQLSIPQSPRHSSALWQLLNSMMT 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 18/243 (7%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK----FLPREIEVVKGLKHPN 83
K+IG G + V SG + + K Y +K FL E ++ H N
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKT-LKAGYTEKQRVDFL-GEAGIMGQFSHHN 107
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ-GYIDEIRARRWFGQLLEALQYCHERG 142
+IR I + II EY ENG+L +R + G ++ + ++Y
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS---YAYASPEI 199
VHRD+ N+L++S+ K+SDFG +R D + T G + +PE
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVL------EDDPEATYTTSGGKIPIRWTAPEA 221
Query: 200 LQGIPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECK 258
+ + SD+WS G+V++ M +G P+ + S +E++K + + P + +
Sbjct: 222 ISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY 280
Query: 259 ELI 261
+L+
Sbjct: 281 QLM 283
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 30 IGTGSYATVK--LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G G++ +V+ + R + DVAIK++ + D + + RE +++ L +P ++R
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD--TEEMMREAQIMHQLDNPYIVRL 401
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI---RARRWFGQLLEALQYCHERGVV 144
+ + + ++ME A G L + G+ +EI Q+ ++Y E+ V
Sbjct: 402 I-GVCQAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQG 202
HR++ N+LL + + K+SDFG ++A A D+ + G + + +PE +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKA-----LGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 203 IPYAPHLSDIWSMGVVLF-AMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELI 261
++ SD+WS GV ++ A+ +G+ P+ E++ ++ PE E L+
Sbjct: 514 RKFSSR-SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALM 572
Query: 262 SNI-LSPVQTRPRLKTIAE 279
S+ + + RP T+ +
Sbjct: 573 SDCWIYKWEDRPDFLTVEQ 591
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 79
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 80 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 136
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 190
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 191 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 243
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 26/283 (9%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDV-AIKIVSKVQ-APPDYLKKFLPREIE 74
T+ E +G G++ +V+L R + A+ V ++Q + PD + F REI+
Sbjct: 2 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQ 60
Query: 75 VVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQL 131
++K L ++++ R + ++MEY +G L D + R + +D R + Q+
Sbjct: 61 ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 120
Query: 132 LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+ ++Y R VHRD+ N+L++S+ ++K++DFG A+ + ++
Sbjct: 121 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMV------------FGRLPFDDSSVNELLK 239
YA PE L ++ SD+WS GVVL+ + F R+ + V L +
Sbjct: 181 YA---PESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 236
Query: 240 QVQNKVT---FPKQPEVSTECKELISNILSPV-QTRPRLKTIA 278
++ P P E EL+ +P Q RP +
Sbjct: 237 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG 279
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 82 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 192
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 193 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 81 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 192 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 82
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 83 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 139
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 193
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 194 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 246
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 79 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 190 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 79
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 80 VCRLL-GICLTSTVQLIMQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 136
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 190
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 191 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 243
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 81 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG R + A+ G A
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFG------RAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 192 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 82
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 83 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 139
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG R + A+ G A
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFG------RAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 194 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 246
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 81 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG R + A+ G A
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFG------RAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 192 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 115
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGTVNYMPPEAIK 229
Query: 202 GIPYAPH----------LSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 288
Query: 247 FPKQPE 252
FP PE
Sbjct: 289 FPDIPE 294
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 7 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 60
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENXYKAQTHG 174
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 175 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 23 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 76
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 190
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 191 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 23 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 76
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 190
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 191 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 26/283 (9%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDV-AIKIVSKVQ-APPDYLKKFLPREIE 74
T+ E +G G++ +V+L R + A+ V ++Q + PD + F REI+
Sbjct: 5 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQ 63
Query: 75 VVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQL 131
++K L ++++ R + ++MEY +G L D + R + +D R + Q+
Sbjct: 64 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 123
Query: 132 LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+ ++Y R VHRD+ N+L++S+ ++K++DFG A+ + ++
Sbjct: 124 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMV------------FGRLPFDDSSVNELLK 239
YA PE L ++ SD+WS GVVL+ + F R+ + V L +
Sbjct: 184 YA---PESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSR 239
Query: 240 QVQNKVT---FPKQPEVSTECKELISNILSPV-QTRPRLKTIA 278
++ P P E EL+ +P Q RP +
Sbjct: 240 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG 282
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 22/272 (8%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 186 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 244
Query: 261 ISNILS-PVQTRPR-------LKTIAEDRWLK 284
++ + RPR L TI E+ L+
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 22/272 (8%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 186 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 244
Query: 261 ISNILS-PVQTRPR-------LKTIAEDRWLK 284
++ + RPR L TI E+ L+
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 77 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 188
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 189 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 247
Query: 261 ISNILS-PVQTRPRLKTI 277
++ + RPR +
Sbjct: 248 MTKCWAYDPSRRPRFTEL 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 13 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 66
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 125
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 126 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 180
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 181 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 75
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ E + Y +
Sbjct: 76 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAEGMNYLED 132
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 186
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 187 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 239
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 71 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 182
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 183 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 241
Query: 261 ISNILS-PVQTRPRLKTI 277
++ + RPR +
Sbjct: 242 MTKCWAYDPSRRPRFTEL 259
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 21 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 74
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 133
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 134 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 188
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 189 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 75
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 76 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 134
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 187
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 188 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 246
Query: 261 ISNILS-PVQTRPRLKTI 277
++ + RPR +
Sbjct: 247 MTKCWAYDPSRRPRFTEL 264
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 3 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 56
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 115
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 170
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 171 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 211
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 79 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 190
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 191 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 249
Query: 261 ISNILS-PVQTRPRLKTI 277
++ + RPR +
Sbjct: 250 MTKCWAYDPSRRPRFTEL 267
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 87
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 88 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGTVNYMPPEAIK 201
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 260
Query: 247 FPKQPE 252
FP PE
Sbjct: 261 FPDIPE 266
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 115
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGTVNYMPPEAIK 229
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 288
Query: 247 FPKQPE 252
FP PE
Sbjct: 289 FPDIPE 294
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + Y ++ + + QL AL Y +
Sbjct: 102 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 213
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 214 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 272
Query: 261 ISNILS-PVQTRPRLKTI 277
++ + RPR +
Sbjct: 273 MTKCWAYDPSRRPRFTEL 290
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 7 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 60
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 174
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 175 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 1 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 54
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 113
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A A +N G
Sbjct: 114 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-----LRADENYYKAQTHG 168
Query: 191 SY--AYASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 169 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 209
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL---K 80
+ V ++ G G++ TV+L + VAIK V +Q P +F RE+++++ L
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV--IQDP-----RFRNRELQIMQDLAVLH 77
Query: 81 HPNLIR----FLQAIETTHR---VYIIMEYAENG---SLFDIIRGQGYIDEIRARRWFGQ 130
HPN+++ F E R + ++MEY + + R Q I + + Q
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 131 LLEALQYCH--ERGVVHRDIKCENLLLD-SDYNIKLSDFGFARAHMRCRSNAADNSLSET 187
L+ ++ H V HRDIK N+L++ +D +KL DFG A+ N A
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA------Y 191
Query: 188 FCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF-DDSSVNEL 237
C Y Y +PE++ G + DIWS+G + M+ G F D+S +L
Sbjct: 192 ICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL 241
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 26/283 (9%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDV-AIKIVSKVQ-APPDYLKKFLPREIE 74
T+ E +G G++ +V+L R + A+ V ++Q + PD + F REI+
Sbjct: 6 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQ 64
Query: 75 VVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQL 131
++K L ++++ R + ++MEY +G L D + R + +D R + Q+
Sbjct: 65 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 124
Query: 132 LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+ ++Y R VHRD+ N+L++S+ ++K++DFG A+ + ++
Sbjct: 125 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMV------------FGRLPFDDSSVNELLK 239
YA PE L ++ SD+WS GVVL+ + F R+ + V L +
Sbjct: 185 YA---PESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 240
Query: 240 QVQNKVT---FPKQPEVSTECKELISNILSPV-QTRPRLKTIA 278
++ P P E EL+ +P Q RP +
Sbjct: 241 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG 283
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 115
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGAVNYMPPEAIK 229
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 288
Query: 247 FPKQPE 252
FP PE
Sbjct: 289 FPDIPE 294
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 35/242 (14%)
Query: 30 IGTGSYATVKLA---RSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G G + V L + +G+ VA+K + + P L+ REIE+++ L H +++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ--LRSGWQREIEILRTLYHEHIV 74
Query: 86 RFLQAIETT--HRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ E V ++MEY GSL D + + + + + Q+ E + Y H +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARA------HMRCRSNAADNSLSETFCGSYAYASP 197
+HR + N+LLD+D +K+ DFG A+A + R R + S F + +P
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVF-----WYAP 184
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS------VNELLKQVQNKVTFPKQP 251
E L+ + + SD+WS GV L+ + L + DS+ EL+ Q ++T +
Sbjct: 185 ECLKECKFY-YASDVWSFGVTLYEL----LTYCDSNQSPHTKFTELIGHTQGQMTVLRLT 239
Query: 252 EV 253
E+
Sbjct: 240 EL 241
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKF--LPREIEVVKGLKHPNLIRF 87
+G G + V+L R + ++ K P L +EIE+++ L H N++++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 88 --LQAIETTHRVYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERGVV 144
+ + + + +IME+ +GSL + + + + I+ + ++ Q+ + + Y R V
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARA--HMRCRSNAADNSLSETFCGSYAYASPEILQG 202
HRD+ N+L++S++ +K+ DFG +A + D+ S F YA ++Q
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF----WYAPECLMQS 204
Query: 203 IPYAPHLSDIWSMGVVLFAMV 223
Y SD+WS GV L ++
Sbjct: 205 KFYIA--SDVWSFGVTLHELL 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 365 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 418
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 477
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A +R A +N G
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LR----ADENYYKAQTHG 532
Query: 191 SYA--YASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 533 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 573
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 8 VQDDIDRKVTVLE--SHGYTVGKIIGTGSYATVKLARSTRHSG---DVAIKIVSKVQAPP 62
V+ DI++ + S+ + + IG G++++V LA + G +A+K + P
Sbjct: 5 VKKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPI 64
Query: 63 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI 122
+ + + V G N++ V I M Y E+ S DI+ + +
Sbjct: 65 RIAAEL--QCLTVAGG--QDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-- 118
Query: 123 RARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLS-----DFGFARA------ 171
R + L +AL+ H+ G+VHRD+K N L YN +L DFG A+
Sbjct: 119 -VREYMLNLFKALKRIHQFGIVHRDVKPSNFL----YNRRLKKYALVDFGLAQGTHDTKI 173
Query: 172 -----------HMRCRSNAADNSLSE-----TFCGSYAYASPEILQGIPYAPHLSDIWSM 215
RC N LS G+ + +PE+L P D+WS
Sbjct: 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233
Query: 216 GVVLFAMVFGRLPFDDSS 233
GV+ +++ GR PF +S
Sbjct: 234 GVIFLSLLSGRYPFYKAS 251
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLAR-STRHSGDVAIKIVSKVQAPPDYLKKFLP 70
+DRK+ LE K +G+G++ TVK + + K +A LK L
Sbjct: 366 LDRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 419
Query: 71 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQ 130
E V++ L +P ++R + E + ++ME AE G L ++ ++ + Q
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 478
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ ++Y E VHRD+ N+LL + + K+SDFG ++A +R A +N G
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LR----ADENYYKAQTHG 533
Query: 191 SYA--YASPEILQGIPYAPHLSDIWSMGVVLF-AMVFGRLPF 229
+ + +PE + ++ SD+WS GV+++ A +G+ P+
Sbjct: 534 KWPVKWYAPECINYYKFSSK-SDVWSFGVLMWEAFSYGQKPY 574
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 35/242 (14%)
Query: 30 IGTGSYATVKLA---RSTRHSGD-VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLI 85
+G G + V L + +G+ VA+K + + P L+ REIE+++ L H +++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ--LRSGWQREIEILRTLYHEHIV 73
Query: 86 RFLQAIETT--HRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGV 143
++ E V ++MEY GSL D + + + + + Q+ E + Y H +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARA------HMRCRSNAADNSLSETFCGSYAYASP 197
+HR + N+LLD+D +K+ DFG A+A + R R + S F + +P
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVF-----WYAP 183
Query: 198 EILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSS------VNELLKQVQNKVTFPKQP 251
E L+ + + SD+WS GV L+ + L + DS+ EL+ Q ++T +
Sbjct: 184 ECLKECKFY-YASDVWSFGVTLYEL----LTYCDSNQSPHTKFTELIGHTQGQMTVLRLT 238
Query: 252 EV 253
E+
Sbjct: 239 EL 240
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 71
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 72 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 131 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGTVNYMPPEAIK 185
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 244
Query: 247 FPKQPE 252
FP PE
Sbjct: 245 FPDIPE 250
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 46/212 (21%)
Query: 71 REIEV-VKGLKHPNLIRFLQAIETTHR----VYIIMEYAENGSLFDII--RGQGYIDEIR 123
RE+E+ + + P+++R + E + + I+ME + G LF I RG E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 124 ARRWFGQLLEALQYCHERGVVHRDIKCENLLLDS---DYNIKLSDFGFARAHMRCRSNAA 180
A + EA+QY H + HRD+K ENLL S + +KL+DFGFA+
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---------- 168
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDS-------S 233
ET Y + D+WS+GV+++ ++ G PF +
Sbjct: 169 -----ETTGEKYDKS--------------CDMWSLGVIMYILLCGYPPFYSNHGLAISPG 209
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
+ ++ Q + P+ EVS E K LI N+L
Sbjct: 210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 241
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 68
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 69 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGTVNYMPPEAIK 182
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 241
Query: 247 FPKQPE 252
FP PE
Sbjct: 242 FPDIPE 247
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 22/272 (8%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + + ++ + + QL AL Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTXXKASKGKLPIKWMAPESIN 185
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 186 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 244
Query: 261 ISNILS-PVQTRPR-------LKTIAEDRWLK 284
++ + RPR L TI E+ L+
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 35/290 (12%)
Query: 26 VGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK-HPNL 84
V +++ G +A V A+ + A+K ++ + + + + +E+ +K L HPN+
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALK---RLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 85 IRFLQAI-------ETTHRVYIIMEYAENGSLFDIIR---GQGYIDEIRARRWFGQLLEA 134
++F A +T ++++ G L + ++ +G + + F Q A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 135 LQYCHERG--VVHRDIKCENLLLDSDYNIKLSDFGFAR--AHMRCRS-NAADNSLSE--- 186
+Q+ H + ++HRD+K ENLLL + IKL DFG A +H S +A +L E
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 187 TFCGSYAYASPEILQGIPYAP--HLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQNK 244
T + Y +PEI+ P DIW++G +L+ + F + PF+D + L+ V K
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK---LRIVNGK 265
Query: 245 VTFPKQPEVSTECKELISNI--------LSPVQTRPRLKTIAEDRWLKPK 286
+ P T LI + LS + +L+ IA R + PK
Sbjct: 266 YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPK 315
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKF--LPREIEVVKGLKHPNLIRF 87
+G G + V+L R + ++ K P L +EIE+++ L H N++++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 88 --LQAIETTHRVYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQLLEALQYCHERGVV 144
+ + + + +IME+ +GSL + + + + I+ + ++ Q+ + + Y R V
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARA--HMRCRSNAADNSLSETFCGSYAYASPEILQG 202
HRD+ N+L++S++ +K+ DFG +A + D+ S F YA ++Q
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF----WYAPECLMQS 192
Query: 203 IPYAPHLSDIWSMGVVLFAMV 223
Y SD+WS GV L ++
Sbjct: 193 KFYIA--SDVWSFGVTLHELL 211
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 67
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 68 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A M+ + + + ++ G+ Y PE ++
Sbjct: 127 GIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV---VKDSQVGTVNYMPPEAIK 181
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 240
Query: 247 FPKQPE 252
FP PE
Sbjct: 241 FPDIPE 246
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKV---QAPPDYLKKFLPREIEVVKGLKHPNL 84
K++G+G++ TV +V I + KV P K+ L E V+ G+ P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEIL-DEAYVMAGVGSPYV 81
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIR-GQGYIDEIRARRWFGQLLEALQYCHERGV 143
R L I T V ++ + G L D +R +G + W Q+ + + Y + +
Sbjct: 82 SRLL-GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRL 140
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFAR-------------AHMRCRSNAADNSLSETFCG 190
VHRD+ N+L+ S ++K++DFG AR + + A ++ L F
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT- 199
Query: 191 SYAYASPEILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPK 249
H SD+WS GV ++ M FG P+D E+ ++ P+
Sbjct: 200 -----------------HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ 242
Query: 250 QPEVSTECKE-LISNILSPVQTRPRLKTIAED 280
P + + ++ + + RPR + + +
Sbjct: 243 PPICTIDVYMIMVKCWMIDSECRPRFRELVSE 274
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 26/283 (9%)
Query: 17 TVLESHGYTVGKIIGTGSYATVKLARSTRHSGDV-AIKIVSKVQ-APPDYLKKFLPREIE 74
T+ E +G G++ +V+L R + A+ V ++Q + PD + F REI+
Sbjct: 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF-QREIQ 76
Query: 75 VVKGLKHPNLIRFLQAIETTHR--VYIIMEYAENGSLFDII-RGQGYIDEIRARRWFGQL 131
++K L ++++ R + ++MEY +G L D + R + +D R + Q+
Sbjct: 77 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 136
Query: 132 LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+ ++Y R VHRD+ N+L++S+ ++K++DFG A+ + ++
Sbjct: 137 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 192 YAYASPEILQGIPYAPHLSDIWSMGVVLFAMV------------FGRLPFDDSSVNELLK 239
YA PE L ++ SD+WS GVVL+ + F R+ + V L +
Sbjct: 197 YA---PESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252
Query: 240 QVQNKVT---FPKQPEVSTECKELISNILSPV-QTRPRLKTIA 278
++ P P E EL+ +P Q RP +
Sbjct: 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG 295
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 17/264 (6%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G+G+ V R + +A+K + + + + + ++ V+K P +++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV-VLKSHDCPYIVQCFG 91
Query: 90 AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER-GVVHRDI 148
T V+I ME + R QG I E + +++AL Y E+ GV+HRD+
Sbjct: 92 TFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV 151
Query: 149 KCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE-ILQGIPYAP 207
K N+LLD IKL DFG + D+ + G AY +PE I P P
Sbjct: 152 KPSNILLDERGQIKLCDFGIS-------GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKP 204
Query: 208 HL---SDIWSMGVVLFAMVFGRLPFDDSSVN-ELLKQV--QNKVTFPKQPEVSTECKELI 261
+D+WS+G+ L + G+ P+ + + E+L +V + P S + + +
Sbjct: 205 DYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFV 264
Query: 262 SNILSPV-QTRPRLKTIAEDRWLK 284
+ L+ + RP+ + E ++K
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 24/245 (9%)
Query: 18 VLESHGYTVGKIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREI 73
+L+ + K++G+G++ TV + + VAIK + + +P K + E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEA 78
Query: 74 EVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQ 130
V+ + +P++ R L I T V +I + G L D +R D I ++ W Q
Sbjct: 79 YVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQ 135
Query: 131 LLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ + + Y +R +VHRD+ N+L+ + ++K++DFG A+ A+ G
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGG 189
Query: 191 SYA---YASPEILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVT 246
A IL I H SD+WS GV ++ M FG P+D +E+ ++
Sbjct: 190 KVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 247
Query: 247 FPKQP 251
P+ P
Sbjct: 248 LPQPP 252
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 22/272 (8%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + + ++ + + QL AL Y +
Sbjct: 454 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQ 201
VHRDI N+L+ S+ +KL DFG +R D++ + G + +PE +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 565
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 566 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 624
Query: 261 ISNILS-PVQTRPR-------LKTIAEDRWLK 284
++ + RPR L TI E+ L+
Sbjct: 625 MTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 656
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 190 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPH 103
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 104 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 160
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 214
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 215 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 267
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 115/245 (46%), Gaps = 29/245 (11%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
IG GS+ TV T + +VA + + ++F E E +KGL+HPN++RF
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRF-KEEAEXLKGLQHPNIVRFYD 92
Query: 90 AIETTHR----VYIIMEYAENGSLFDIIRGQGYIDEIRA-RRWFGQLLEALQYCHERG-- 142
+ E+T + + ++ E +G+L ++ + + +I+ R W Q+L+ LQ+ H R
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLK-RFKVXKIKVLRSWCRQILKGLQFLHTRTPP 151
Query: 143 VVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
++HRD+KC+N+ + ++K+ D G A S ++ G+ + +PE +
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLA--------TLKRASFAKAVIGTPEFXAPEXYE 203
Query: 202 GIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQVQ--------NKVTFPKQPE 252
Y + D+++ G P+ + + ++ ++V +KV P+ E
Sbjct: 204 E-KYDESV-DVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261
Query: 253 VSTEC 257
+ C
Sbjct: 262 IIEGC 266
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 81 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 192 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 82 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 192
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 193 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 190 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 86 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 142
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 196
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 197 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 82 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 192
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 193 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 84
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 85 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 141
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 195
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 196 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 248
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 82 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 192
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 193 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++ +G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +IM+ G L D +R D I ++ W Q+ + + Y +
Sbjct: 86 VCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 142
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 196
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 197 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 72
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 73 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 129
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 183
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 184 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 190 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 26/246 (10%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
Y++ K IG+G + V + + AIK V+ +A L + EI + L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 87
Query: 84 --LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHER 141
+IR T +Y++ME N L ++ + ID + ++ +LEA+ H+
Sbjct: 88 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 142 GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQ 201
G+VH D+K N L+ D +KL DFG A +S G+ Y PE ++
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQ----VGTVNYMPPEAIK 201
Query: 202 GIPYA----------PHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLK-----QVQNKVT 246
+ + SD+WS+G +L+ M +G+ PF +N++ K +++
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIE 260
Query: 247 FPKQPE 252
FP PE
Sbjct: 261 FPDIPE 266
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG R + A+ G A
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFG------RAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 190 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPH 80
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 81 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG R + A+ G A
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFG------RAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 192 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++G+G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 86 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 142
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG R + A+ G A
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFG------RAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 197 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 20 ESHGYTVGKIIGTG--SYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
E Y + +IG G TV LAR V ++ ++ ++A + + FL E+ V K
Sbjct: 7 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN-LEACSNEMVTFLQGELHVSK 65
Query: 78 GLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDII--RGQGYIDEIRARRWFGQLLEAL 135
HPN++ + + ++++ + GS D+I ++E+ +L+AL
Sbjct: 66 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 125
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF----CGS 191
Y H G VHR +K ++L+ D + LS R+++ S+ + F
Sbjct: 126 DYIHHMGYVHRSVKASHILISVDGKVYLSGL---RSNLSMISHGQRQRVVHDFPKYSVKV 182
Query: 192 YAYASPEIL-QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
+ SPE+L Q + SDI+S+G+ + G +PF D ++L + N
Sbjct: 183 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN 235
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ--APPDYLKKFLPREIEVVKG 78
+H + + I+G G+ A V R + AIK+ + + P D RE EV+K
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM----REFEVLKK 63
Query: 79 LKHPNLIRFLQAIE---TTHRVYIIMEYAENGSLFDIIR--GQGY-IDEIRARRWFGQLL 132
L H N+++ AIE TT +IME+ GSL+ ++ Y + E ++
Sbjct: 64 LNHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 133 EALQYCHERGVVHRDIKCENLLL----DSDYNIKLSDFGFARAHMRCRSNAADNSLSETF 188
+ + E G+VHR+IK N++ D KL+DFG AR D+ +
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-------ELEDDEQFVSL 175
Query: 189 CGSYAYASPEILQ-GIPYAPHLS------DIWSMGVVLFAMVFGRLPF 229
G+ Y P++ + + H D+WS+GV + G LPF
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 69 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSL--FD---IIRGQGY----- 118
E++++ +K+ + I VYII EY EN S+ FD + + Y
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 119 IDEIRARRWFGQLLEALQYCH-ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRS 177
I I+ +L + Y H E+ + HRD+K N+L+D + +KLSDFG + + +
Sbjct: 150 IQVIKC--IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 178 NAADNSLSETFCGSYAYASPEILQG-IPYAPHLSDIWSMGVVLFAMVFGRLPFD-DSSVN 235
+ G+Y + PE Y DIWS+G+ L+ M + +PF S+
Sbjct: 208 KGSR--------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259
Query: 236 ELLKQVQNK-VTFP 248
EL ++ K + +P
Sbjct: 260 ELFNNIRTKNIEYP 273
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 20 ESHGYTVGKIIGTG--SYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
E Y + +IG G TV LAR V ++ ++ ++A + + FL E+ V K
Sbjct: 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN-LEACSNEMVTFLQGELHVSK 81
Query: 78 GLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDII--RGQGYIDEIRARRWFGQLLEAL 135
HPN++ + + ++++ + GS D+I ++E+ +L+AL
Sbjct: 82 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141
Query: 136 QYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF----CGS 191
Y H G VHR +K ++L+ D + LS R+++ S+ + F
Sbjct: 142 DYIHHMGYVHRSVKASHILISVDGKVYLSGL---RSNLSMISHGQRQRVVHDFPKYSVKV 198
Query: 192 YAYASPEIL-QGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSVNELLKQVQN 243
+ SPE+L Q + SDI+S+G+ + G +PF D ++L + N
Sbjct: 199 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN 251
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 92
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL--PVKWMALESLQT 210
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 211 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 94
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + ++ N + + E LQ
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL--PVKWMALESLQT 212
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 213 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 18 VLESHGYTVGKIIGTGSYATVKLARSTRHS--GDVAIKIVSKVQAPPDYLKKFLPREIEV 75
VL+ + +IG G++ V AR + D AIK + + + D+ + E+EV
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEV 68
Query: 76 VKGL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRA---------- 124
+ L HPN+I L A E +Y+ +EYA +G+L D +R ++ A
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 125 ------RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSN 178
+ + + Y ++ +HRD+ N+L+ +Y K++DFG +R
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ------ 182
Query: 179 AADNSLSETFCGSYAYASP---EILQGIPYAPHL--SDIWSMGVVLFAMV-FGRLPFDDS 232
E + P ++ + Y+ + SD+WS GV+L+ +V G P+
Sbjct: 183 -------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 235
Query: 233 SVNELLKQVQNKVTFPKQPEVSTECKELI 261
+ EL +++ K E +L+
Sbjct: 236 TCAELYEKLPQGYRLEKPLNCDDEVYDLM 264
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Query: 18 VLESHGYTVGKIIGTGSYATV--KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEV 75
+L+ + K++G+G++ TV L + + I+ +A K + E V
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 76 VKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLL 132
+ + +P++ R L I T V +I + G L D +R D I ++ W Q+
Sbjct: 105 MASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 161
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+ + Y +R +VHRD+ N+L+ + ++K++DFG A+ A+ G
Sbjct: 162 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKV 215
Query: 193 A---YASPEILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFP 248
A IL I H SD+WS GV ++ M FG P+D +E+ ++ P
Sbjct: 216 PIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 273
Query: 249 KQP 251
+ P
Sbjct: 274 QPP 276
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 18 VLESHGYTVGKIIGTGSYATVKLARSTRHS--GDVAIKIVSKVQAPPDYLKKFLPREIEV 75
VL+ + +IG G++ V AR + D AIK + + + D+ + E+EV
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEV 78
Query: 76 VKGL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRA---------- 124
+ L HPN+I L A E +Y+ +EYA +G+L D +R ++ A
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 125 ------RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSN 178
+ + + Y ++ +HRD+ N+L+ +Y K++DFG +R
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ------ 192
Query: 179 AADNSLSETFCGSYAYASP---EILQGIPYAPHL--SDIWSMGVVLFAMV-FGRLPFDDS 232
E + P ++ + Y+ + SD+WS GV+L+ +V G P+
Sbjct: 193 -------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245
Query: 233 SVNELLKQVQNKVTFPKQPEVSTECKELI 261
+ EL +++ K E +L+
Sbjct: 246 TCAELYEKLPQGYRLEKPLNCDDEVYDLM 274
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSG-----DVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+GK +G G + V A + G VA+K++ K A P L+ L E V+K +
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLL-SEFNVLKQV 83
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------------- 119
HP++I+ A + +I+EYA+ GSL +R G GY+
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 120 ------DEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHM 173
++ + W Q+ + +QY E +VHRD+ N+L+ +K+SDFG +
Sbjct: 144 ERALTMGDLISFAW--QISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS---- 197
Query: 174 RCRSNAADNSLSETFCG--SYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV 223
R ++S + G + + E L Y SD+WS GV+L+ +V
Sbjct: 198 --RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIV 246
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 31/228 (13%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ--APPDYLKKFLPREIEVVKG 78
+H + + I+G G+ A V R + AIK+ + + P D RE EV+K
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM----REFEVLKK 63
Query: 79 LKHPNLIRFLQAIE---TTHRVYIIMEYAENGSLFDIIR--GQGY-IDEIRARRWFGQLL 132
L H N+++ AIE TT +IME+ GSL+ ++ Y + E ++
Sbjct: 64 LNHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 133 EALQYCHERGVVHRDIKCENLLL----DSDYNIKLSDFGFARAHMRCRSNAADNSLSETF 188
+ + E G+VHR+IK N++ D KL+DFG AR D+
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-------ELEDDEQFVXL 175
Query: 189 CGSYAYASPEILQ-GIPYAPHLS------DIWSMGVVLFAMVFGRLPF 229
G+ Y P++ + + H D+WS+GV + G LPF
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 72 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSL-FDIIR-GQGYIDEIRARRWFG 129
E ++++ + ++ A ET + +++ G L F I GQ E RA +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 130 QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
++ L+ H +V+RD+K EN+LLD +I++SD G A + + +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-------VHVPEGQTIKGRV 346
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-------SSVNELLKQVQ 242
G+ Y +PE+++ Y D W++G +L+ M+ G+ PF V L+K+V
Sbjct: 347 GTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 243 NKVTFPKQPEVSTECKELISN 263
+ + P+ + C +L+
Sbjct: 406 EEYSERFSPQARSLCSQLLCK 426
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 72 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSL-FDIIR-GQGYIDEIRARRWFG 129
E ++++ + ++ A ET + +++ G L F I GQ E RA +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 130 QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFC 189
++ L+ H +V+RD+K EN+LLD +I++SD G A + + +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-------VHVPEGQTIKGRV 346
Query: 190 GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDD-------SSVNELLKQVQ 242
G+ Y +PE+++ Y D W++G +L+ M+ G+ PF V L+K+V
Sbjct: 347 GTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 243 NKVTFPKQPEVSTECKELI 261
+ + P+ + C +L+
Sbjct: 406 EEYSERFSPQARSLCSQLL 424
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 22/272 (8%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + + ++ + + QL AL Y +
Sbjct: 454 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY--AYASPEILQ 201
VHRDI N+L+ + +KL DFG +R D++ + G + +PE +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 565
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 566 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 624
Query: 261 ISNILS-PVQTRPR-------LKTIAEDRWLK 284
++ + RPR L TI E+ L+
Sbjct: 625 MTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 656
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 22/272 (8%)
Query: 26 VGKIIGTGSYATVKLA-RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
+G+ IG G + V + + +A+ I + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 85 IRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERGV 143
++ + I T + V+IIME G L ++ + + ++ + + QL AL Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 144 VHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA--YASPEILQ 201
VHRDI N+L+ + +KL DFG +R D++ + G + +PE +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 202 GIPYAPHLSDIWSMGVVLFAMVF-GRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ SD+W GV ++ ++ G PF N+++ +++N P P L
Sbjct: 186 FRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 244
Query: 261 ISNILS-PVQTRPR-------LKTIAEDRWLK 284
++ + RPR L TI E+ L+
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 30 IGTGSYATVKLA---RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
+G G + V L + +G++ K A P + + +EI++++ L H ++I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH-RSGWKQEIDILRTLYHEHIIK 97
Query: 87 FLQAIE--TTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVV 144
+ E + ++MEY GSL D + I + + Q+ E + Y H + +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYI 156
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARA----HMRCRSNAADNSLSETFCGSYAYASPEIL 200
HRD+ N+LLD+D +K+ DFG A+A H R ++ S F + +PE L
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVR--EDGDSPVF-----WYAPECL 209
Query: 201 QGIPYAPHLSDIWSMGVVLFAMV 223
+ + + SD+WS GV L+ ++
Sbjct: 210 KEYKFY-YASDVWSFGVTLYELL 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 93
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 211
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 212 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 111
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 229
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 230 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 258
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSG-----DVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+GK +G G + V A + G VA+K++ K A P L+ L E V+K +
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLL-SEFNVLKQV 83
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------------- 119
HP++I+ A + +I+EYA+ GSL +R G GY+
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 120 ------DEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHM 173
++ + W Q+ + +QY E +VHRD+ N+L+ +K+SDFG +
Sbjct: 144 ERALTMGDLISFAW--QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS---- 197
Query: 174 RCRSNAADNSLSETFCG--SYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV 223
R ++S + G + + E L Y SD+WS GV+L+ +V
Sbjct: 198 --RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIV 246
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 112
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 230
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 231 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 259
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 152
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR ++ N + + E LQ
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL--PVKWMALESLQT 270
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 271 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 299
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 36/233 (15%)
Query: 71 REIEVVKGLKHPNLIRFLQAIETTH----RVYIIMEYAENGSLFDIIRGQ-------GYI 119
REI G+KH NL++F+ A + +++I + + GSL D ++G ++
Sbjct: 58 REIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV 117
Query: 120 DEIRARRWFGQLLEALQYC----HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRC 175
E +R L E + +C H+ + HRD K +N+LL SD L+DFG A +R
Sbjct: 118 AETMSRG-LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA---VRF 173
Query: 176 RSNAADNSLSETFCGSYAYASPEILQG-IPY---APHLSDIWSMGVVLFAMVFGRLPFDD 231
+ G+ Y +PE+L+G I + A D+++MG+VL+ +V R D
Sbjct: 174 EPGKPPGD-THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV-SRCKAAD 231
Query: 232 SSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLK 284
V+E + + ++ + P + E + ++ + RP +K D WLK
Sbjct: 232 GPVDEYMLPFEEEIG--QHPSL-----EELQEVVVHKKMRPTIK----DHWLK 273
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 90
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 208
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 209 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 94
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR ++ N + + E LQ
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL--PVKWMALESLQT 212
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 213 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 91
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR ++ N + + E LQ
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL--PVKWMALESLQT 209
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 210 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 238
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++ +G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 189
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 190 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSG-----DVAIKIVSKVQAPPDYLKKFLPREIEVVKGL 79
+GK +G G + V A + G VA+K++ K A P L+ L E V+K +
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLL-SEFNVLKQV 83
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------------- 119
HP++I+ A + +I+EYA+ GSL +R G GY+
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 120 ------DEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHM 173
++ + W Q+ + +QY E +VHRD+ N+L+ +K+SDFG +
Sbjct: 144 ERALTMGDLISFAW--QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS---- 197
Query: 174 RCRSNAADNSLSETFCG--SYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV 223
R ++S + G + + E L Y SD+WS GV+L+ +V
Sbjct: 198 --RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIV 246
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 93
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR ++ N + + E LQ
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL--PVKWMALESLQT 211
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 212 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 85
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 203
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 204 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 88
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 206
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 207 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 93
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 211
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 212 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 91
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 209
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 210 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 92
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + ++Y +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + N + + E LQ
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQT 210
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 211 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 93
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR ++ N + + E LQ
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL--PVKWMALESLQT 211
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 212 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 28 KIIGTGSYATVK----LARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPN 83
K++ +G++ TV + + VAIK + + +P K + E V+ + +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR---RWFGQLLEALQYCHE 140
+ R L I T V +I + G L D +R D I ++ W Q+ + + Y +
Sbjct: 86 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 142
Query: 141 RGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA---YASP 197
R +VHRD+ N+L+ + ++K++DFG A+ A+ G A
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL------GAEEKEYHAEGGKVPIKWMALE 196
Query: 198 EILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQP 251
IL I H SD+WS GV ++ M FG P+D +E+ ++ P+ P
Sbjct: 197 SILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 28 KIIGTGSYATVKLARSTRHSGD---VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + G A+K ++++ + + +FL I ++K HPN+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 98
Query: 85 IRFLQ-AIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ L + + +++ Y ++G L + IR + + ++ FG Q+ + +++ +
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR ++ N + + E LQ
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL--PVKWMALESLQT 216
Query: 203 IPYAPHLSDIWSMGVVLFA-MVFGRLPFDD 231
+ SD+WS GV+L+ M G P+ D
Sbjct: 217 QKFTTK-SDVWSFGVLLWELMTRGAPPYPD 245
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 18 VLESHGYTVGKIIGTGSYATVKLARSTRHS--GDVAIKIVSKVQAPPDYLKKFLPREIEV 75
VL+ + +IG G++ V AR + D AIK + + + D+ + E+EV
Sbjct: 18 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEV 75
Query: 76 VKGL-KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRA---------- 124
+ L HPN+I L A E +Y+ +EYA +G+L D +R ++ A
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 125 ------RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSN 178
+ + + Y ++ +HR++ N+L+ +Y K++DFG +R
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQ------ 189
Query: 179 AADNSLSETFCGSYAYASP---EILQGIPYAPHL--SDIWSMGVVLFAMV-FGRLPFDDS 232
E + P ++ + Y+ + SD+WS GV+L+ +V G P+
Sbjct: 190 -------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 242
Query: 233 SVNELLKQVQNKVTFPKQPEVSTECKELI 261
+ EL +++ K E +L+
Sbjct: 243 TCAELYEKLPQGYRLEKPLNCDDEVYDLM 271
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 41/228 (17%)
Query: 71 REIEVVKGLKHPNLIRFLQAIETTH---RVYIIMEYAENGSLFDIIRGQG---------Y 118
REI +++ LKHPN+I LQ + +H +V+++ +YAE+ L+ II+
Sbjct: 67 REIALLRELKHPNVIS-LQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQ 124
Query: 119 IDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSD----YNIKLSDFGFARAHMR 174
+ + Q+L+ + Y H V+HRD+K N+L+ + +K++D GFAR
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 175 CRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF----- 229
AD + ++ Y +PE+L G + DIW++G + FA + P
Sbjct: 185 PLKPLAD---LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI-FAELLTSEPIFHCRQ 240
Query: 230 -DDSSVN----ELLKQVQNKVTFP---------KQPEVSTECKELISN 263
D + N + L ++ N + FP K PE ST K+ N
Sbjct: 241 EDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN 288
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 143
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 196
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 195
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 143
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 196
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 163
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 216
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 82 PNLIRFLQAIETTHRVY--IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCH 139
PN+++ L + H +I EY N F ++ + + R + +LL+AL YCH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 144
Query: 140 ERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
+G++HRD+K N+++D + ++L D+G A + + S + PE
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-------YNVRVASRYFKGPE 197
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
+L + + D+WS+G + M+F + PF
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSG---DVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
+ +I+G G + V T H G +VA+K K D +KF+ + ++K L H
Sbjct: 11 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAV-IMKNLDH 68
Query: 82 PNLIRFLQAIETTHRVYIIME---YAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
P++++ + IE +IIME Y E G + R + + + + Q+ +A+ Y
Sbjct: 69 PHIVKLIGIIEE-EPTWIIMELYPYGELGHYLE--RNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
VHRDI N+L+ S +KL DFG +R D + + SPE
Sbjct: 126 ESINCVHRDIAVRNILVASPECVKLGDFGLSRY-----IEDEDYYKASVTRLPIKWMSPE 180
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPF 229
+ + SD+W V ++ ++ FG+ PF
Sbjct: 181 SINFRRFTTA-SDVWMFAVCMWEILSFGKQPF 211
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSG---DVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
+ +I+G G + V T H G +VA+K K D +KF+ + ++K L H
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAV-IMKNLDH 72
Query: 82 PNLIRFLQAIETTHRVYIIME---YAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
P++++ + IE +IIME Y E G + R + + + + Q+ +A+ Y
Sbjct: 73 PHIVKLIGIIEE-EPTWIIMELYPYGELGHYLE--RNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
VHRDI N+L+ S +KL DFG +R D + + SPE
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSRY-----IEDEDYYKASVTRLPIKWMSPE 184
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPF 229
+ + SD+W V ++ ++ FG+ PF
Sbjct: 185 SINFRRFTTA-SDVWMFAVCMWEILSFGKQPF 215
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE------ 133
+HP+L+ + + + + +I +Y ENG+L + G D + Q LE
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS---DLPTMSMSWEQRLEICIGAA 149
Query: 134 -ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
L Y H R ++HRD+K N+LLD ++ K++DFG ++ + L G+
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG----TELGQTHLXXVVKGTL 205
Query: 193 AYASPE-ILQGIPYAPHLSDIWSMGVVLFAMVFGR 226
Y PE ++G SD++S GVVLF ++ R
Sbjct: 206 GYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 25 TVGKIIGTGSYATVKLARSTRHSG---DVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKH 81
+ +I+G G + V T H G +VA+K K D +KF+ + ++K L H
Sbjct: 27 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAV-IMKNLDH 84
Query: 82 PNLIRFLQAIETTHRVYIIME---YAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYC 138
P++++ + IE +IIME Y E G + R + + + + Q+ +A+ Y
Sbjct: 85 PHIVKLIGIIEE-EPTWIIMELYPYGELGHYLE--RNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 139 HERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPE 198
VHRDI N+L+ S +KL DFG +R D + + SPE
Sbjct: 142 ESINCVHRDIAVRNILVASPECVKLGDFGLSRY-----IEDEDYYKASVTRLPIKWMSPE 196
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPF 229
+ + SD+W V ++ ++ FG+ PF
Sbjct: 197 SINFRRFTTA-SDVWMFAVCMWEILSFGKQPF 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 30 IGTGSYATVKLA---RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
+G G + V L + +G++ K P + + +EI++++ L H ++I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH-RSGWKQEIDILRTLYHEHIIK 80
Query: 87 FLQAIETT--HRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVV 144
+ E + ++MEY GSL D + I + + Q+ E + Y H + +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHSQHYI 139
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARA------HMRCRSNAADNSLSETFCGSYAYASPE 198
HR++ N+LLD+D +K+ DFG A+A + R R + S F + +PE
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVF-----WYAPE 190
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMV 223
L+ + + SD+WS GV L+ ++
Sbjct: 191 CLKEYKFY-YASDVWSFGVTLYELL 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 28 KIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNL 84
++IG G + V + ++ AIK +S++ ++ FL RE +++GL HPN+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFL-REGLLMRGLNHPNV 84
Query: 85 IRFLQAIETTHRV-YIIMEYAENGSLFDIIRGQGYIDEIRARRWFG-QLLEALQYCHERG 142
+ + + + ++++ Y +G L IR ++ FG Q+ ++Y E+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
VHRD+ N +LD + +K++DFG AR + + + + E LQ
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWTALESLQT 202
Query: 203 IPYAPHLSDIWSMGVVLFAMV 223
+ SD+WS GV+L+ ++
Sbjct: 203 YRFTTK-SDVWSFGVLLWELL 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 30 IGTGSYATVKLA---RSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIR 86
+G G + V L + +G++ K P + + +EI++++ L H ++I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH-RSGWKQEIDILRTLYHEHIIK 80
Query: 87 FLQAIETT--HRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVV 144
+ E + ++MEY GSL D + I + + Q+ E + Y H + +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYI 139
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFARA------HMRCRSNAADNSLSETFCGSYAYASPE 198
HR++ N+LLD+D +K+ DFG A+A + R R + S F + +PE
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVF-----WYAPE 190
Query: 199 ILQGIPYAPHLSDIWSMGVVLFAMV 223
L+ + + SD+WS GV L+ ++
Sbjct: 191 CLKEYKFY-YASDVWSFGVTLYELL 214
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 80 KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLE------ 133
+HP+L+ + + + + +I +Y ENG+L + G D + Q LE
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS---DLPTMSMSWEQRLEICIGAA 149
Query: 134 -ALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNS-LSETFCGS 191
L Y H R ++HRD+K N+LLD ++ K++DFG ++ + D + L G+
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK-----KGTELDQTHLXXVVKGT 204
Query: 192 YAYASPE-ILQGIPYAPHLSDIWSMGVVLFAMVFGR 226
Y PE ++G SD++S GVVLF ++ R
Sbjct: 205 LGYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 53/283 (18%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIK--IVSKVQAPPDYLKKF--LPREIEVVKGLKHPN 83
K IG G + V R + VAIK I+ + + ++KF RE+ ++ L HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL------QY 137
+++ + R ++ME+ G L+ + +D+ +W +L L +Y
Sbjct: 85 IVKLYGLMHNPPR--MVMEFVPCGDLYHRL-----LDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 138 CHERG--VVHRDIKCENLLLDS-DYN----IKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ +VHRD++ N+ L S D N K++DFG ++ + S G
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG---------LLG 188
Query: 191 SYAYASPEILQGIPYA-PHLSDIWSMGVVLFAMVFGRLPFDDSSVNEL--LKQVQNKVTF 247
++ + +PE + + +D +S ++L+ ++ G PFD+ S ++ + ++ +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 248 PKQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSR 290
P PE +C PRL+ + E W PK R
Sbjct: 249 PTIPE---DCP-------------PRLRNVIELCW-SGDPKKR 274
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYL-KKFLPREIEVV-KGLKHPNLIRF 87
IG G+Y +V H I V ++++ D +K L +++VV + P +++F
Sbjct: 30 IGRGAYGSVN---KMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGY--IDEIRARRWFGQL----LEALQYCHER 141
A+ +I ME FD Y +D++ G++ ++AL + E
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 142 -GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEIL 200
++HRDIK N+LLD NIKL DFG + D+ G Y +PE +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS-------GQLVDSIAKTRDAGCRPYMAPERI 197
Query: 201 QGIPYAPHL-----SDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQV 241
P A SD+WS+G+ L+ + GR P+ +SV + L QV
Sbjct: 198 D--PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 99 IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLD-S 157
++ EY N + + + + R + +LL+AL YCH +G++HRD+K N+++D
Sbjct: 112 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 158 DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGV 217
++L D+G A + + S + PE+L + D+WS+G
Sbjct: 169 QKKLRLIDWGLAEFYHPAQE-------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 221
Query: 218 VLFAMVFGRLPF 229
+L +M+F R PF
Sbjct: 222 MLASMIFRREPF 233
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 99 IIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLD-S 157
++ EY N + + + + R + +LL+AL YCH +G++HRD+K N+++D
Sbjct: 117 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 158 DYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGV 217
++L D+G A + + S + PE+L + D+WS+G
Sbjct: 174 QKKLRLIDWGLAEFYHPAQE-------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 226
Query: 218 VLFAMVFGRLPF 229
+L +M+F R PF
Sbjct: 227 MLASMIFRREPF 238
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 43/274 (15%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKF--LPREIEVVKGLKHPNLI 85
K++G+G + TV + I + KV + F + + + L H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + + ++ +Y GSL D +R +G + W Q+ + + Y E G+V
Sbjct: 97 RLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFAR---------AHMRCRSNAADNSLSETFCGSYAYA 195
HR++ N+LL S ++++DFG A + ++ +L G Y
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT-- 213
Query: 196 SPEILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
H SD+WS GV ++ M FG P+ + E+ ++ QP++
Sbjct: 214 ------------HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL-AQPQIC 260
Query: 255 T--------ECKELISNILSPVQTRPRLKTIAED 280
T +C + NI RP K +A +
Sbjct: 261 TIDVYMVMVKCWMIDENI------RPTFKELANE 288
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 43/274 (15%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKF--LPREIEVVKGLKHPNLI 85
K++G+G + TV + I + KV + F + + + L H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 86 RFLQAIETTHRVYIIMEYAENGSLFDIIRG-QGYIDEIRARRWFGQLLEALQYCHERGVV 144
R L + + ++ +Y GSL D +R +G + W Q+ + + Y E G+V
Sbjct: 79 RLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 145 HRDIKCENLLLDSDYNIKLSDFGFA---------RAHMRCRSNAADNSLSETFCGSYAYA 195
HR++ N+LL S ++++DFG A + ++ +L G Y
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT-- 195
Query: 196 SPEILQGIPYAPHLSDIWSMGVVLFA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVS 254
H SD+WS GV ++ M FG P+ + E+ ++ QP++
Sbjct: 196 ------------HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL-AQPQIC 242
Query: 255 T--------ECKELISNILSPVQTRPRLKTIAED 280
T +C + NI RP K +A +
Sbjct: 243 TIDVYMVMVKCWMIDENI------RPTFKELANE 270
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 44/290 (15%)
Query: 12 IDRKVTVLESHGYTVGKIIGTGSYATVKLARSTR--HSGDVAIKIVSKVQAPPDYLKKFL 69
+D V ++ H + + +G G++ V LA D + V ++ D +K
Sbjct: 3 MDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDF 62
Query: 70 PREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQG------------ 117
RE E++ L+H ++++F + ++ EY ++G L +R G
Sbjct: 63 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 118 -YIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCR 176
+ + + Q+ + Y + VHRD+ N L+ + +K+ DFG +R
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR------ 176
Query: 177 SNAADNSLSETFCGSYAYASPEILQGIPYAP----------HLSDIWSMGVVLFAM-VFG 225
+ + Y + I + P SD+WS+GVVL+ + +G
Sbjct: 177 ---------DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 227
Query: 226 RLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQTRPRLK 275
+ P+ S NE+++ + + E EL +L Q P ++
Sbjct: 228 KQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYEL---MLGCWQREPHMR 274
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 53/283 (18%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIK--IVSKVQAPPDYLKKF--LPREIEVVKGLKHPN 83
K IG G + V R + VAIK I+ + + ++KF RE+ ++ L HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL------QY 137
+++ + R ++ME+ G L+ + +D+ +W +L L +Y
Sbjct: 85 IVKLYGLMHNPPR--MVMEFVPCGDLYHRL-----LDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 138 CHERG--VVHRDIKCENLLLDS-DYN----IKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ +VHRD++ N+ L S D N K++DFG ++ + S G
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG---------LLG 188
Query: 191 SYAYASPEILQGIPYA-PHLSDIWSMGVVLFAMVFGRLPFDDSSVNEL--LKQVQNKVTF 247
++ + +PE + + +D +S ++L+ ++ G PFD+ S ++ + ++ +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 248 PKQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSR 290
P PE +C PRL+ + E W PK R
Sbjct: 249 PTIPE---DCP-------------PRLRNVIELCW-SGDPKKR 274
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 21 SHGYTVGKIIGTGSYATV---KLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVK 77
S ++ I+G G + V +LA T VA+K + + + L+ E+E++
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGRLADGTL----VAVKRLKEERXQGGELQ--FQTEVEMIS 90
Query: 78 GLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLE 133
H NL+R T ++ Y NGS+ +R Q +D + +R
Sbjct: 91 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR 150
Query: 134 ALQYCHER---GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCG 190
L Y H+ ++HRD+K N+LLD ++ + DFG A+ + D + G
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-----MDYKDXHVXXAVRG 205
Query: 191 SYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
+ + +PE L + +D++ GV+L ++ G+ FD
Sbjct: 206 TIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 8 VQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK 67
VQ + R++T+LE +G G Y V R + +VA+KI S D
Sbjct: 31 VQRTVARQITLLEC--------VGKGRYGEV--WRGSWQGENVAVKIFSS----RDEKSW 76
Query: 68 FLPREIEVVKGLKHPNLIRFLQAIETTH----RVYIIMEYAENGSLFDIIRGQGYIDEIR 123
F E+ L+H N++ F+ + T+ ++++I Y E GSL+D ++ +D +
Sbjct: 77 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVS 135
Query: 124 ARRWFGQLLEALQYCH--------ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRC 175
R + L + H + + HRD+K +N+L+ + ++D G A H +
Sbjct: 136 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ- 194
Query: 176 RSNAADNSLSETFCGSYAYASPEILQGIPYAPHLS-----DIWSMGVVLF 220
+N D + G+ Y +PE+L DIW+ G+VL+
Sbjct: 195 STNQLDVG-NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+L+D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 53/283 (18%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIK--IVSKVQAPPDYLKKF--LPREIEVVKGLKHPN 83
K IG G + V R + VAIK I+ + + ++KF RE+ ++ L HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 84 LIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEAL------QY 137
+++ + R ++ME+ G L+ + +D+ +W +L L +Y
Sbjct: 85 IVKLYGLMHNPPR--MVMEFVPCGDLYHRL-----LDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 138 CHERG--VVHRDIKCENLLLDS-DYN----IKLSDFGFARAHMRCRSNAADNSLSETFCG 190
+ +VHRD++ N+ L S D N K++DF ++ + S G
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG---------LLG 188
Query: 191 SYAYASPEILQGIPYA-PHLSDIWSMGVVLFAMVFGRLPFDDSSVNEL--LKQVQNKVTF 247
++ + +PE + + +D +S ++L+ ++ G PFD+ S ++ + ++ +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 248 PKQPEVSTECKELISNILSPVQTRPRLKTIAEDRWLKPKPKSR 290
P PE +C PRL+ + E W PK R
Sbjct: 249 PTIPE---DCP-------------PRLRNVIELCW-SGDPKKR 274
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 27 GKIIGTGSYATVKLARS-TRHSGDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL-KHP 82
GK +G G++ V A + D +K+ K+ + K+ L E++++ L +H
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYID---------EIRARRWFG-QLL 132
N++ L A V +I EY G L + +R + D E+R F Q+
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+ + + + +HRD+ N+LL + + K+ DFG AR M N ++ +
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM----NDSNYIVKGNARLPV 218
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVN 235
+ +PE + Y SD+WS G++L+ + G P+ VN
Sbjct: 219 KWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVN 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 27 GKIIGTGSYATVKLARS-TRHSGDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL-KHP 82
GK +G G++ V A + D +K+ K+ + K+ L E++++ L +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYID---------EIRARRWFG-QLL 132
N++ L A V +I EY G L + +R + D E+R F Q+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 133 EALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSY 192
+ + + + +HRD+ N+LL + + K+ DFG AR M N ++ +
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM----NDSNYIVKGNARLPV 226
Query: 193 AYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVN 235
+ +PE + Y SD+WS G++L+ + G P+ VN
Sbjct: 227 KWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVN 269
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 133 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 186
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 187 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 132 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 185
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 186 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 50 VAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRV----YIIMEYAE 105
VA+KI +Q + ++ E+ + G+KH N+++F+ A + V ++I + E
Sbjct: 50 VAVKIFP-IQDKQSWQNEY---EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105
Query: 106 NGSLFDIIRGQ-------GYIDEIRAR--RWFGQLLEALQYCHERGVVHRDIKCENLLLD 156
GSL D ++ +I E AR + + + L+ H+ + HRDIK +N+LL
Sbjct: 106 KGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK 165
Query: 157 SDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG-IPY---APHLSDI 212
++ ++DFG A +S A D + G+ Y +PE+L+G I + A D+
Sbjct: 166 NNLTACIADFGLALKFEAGKS-AGD---THGQVGTRRYMAPEVLEGAINFQRDAFLRIDM 221
Query: 213 WSMGVVLFAMVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPVQTRP 272
++MG+VL+ + R D V+E + + ++ + P + E + ++ + RP
Sbjct: 222 YAMGLVLWELA-SRCTAADGPVDEYMLPFEEEIG--QHPSL-----EDMQEVVVHKKKRP 273
Query: 273 RLKTIAEDRWLKPKPKSRGVDKAEAELDH 301
L+ D W K + + E DH
Sbjct: 274 VLR----DYWQKHAGMAMLCETIEECWDH 298
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 133 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 186
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 187 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 187
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 188 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 125 RRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDY-NIKLSDFGFARAHMRCRSNAADNS 183
R + ++L+AL YCH G++HRD+K N+++D ++ ++L D+G A + +
Sbjct: 139 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------ 192
Query: 184 LSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPF 229
S + PE+L + D+WS+G +L +M+F + PF
Sbjct: 193 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 10 DDIDRKVTVLESH---GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLK 66
DD V V H Y V K+IG GS+ V A + VA+K+V K
Sbjct: 82 DDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-------K 134
Query: 67 KFLPREIEVVKGLKH------PNLIRFLQAIET-THRVYIIMEYAE-NGSLFDIIRG--- 115
+F + E ++ L+H N + + +E T R +I M + + +L+++I+
Sbjct: 135 RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF 194
Query: 116 QGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHM 173
QG+ + R++ +L+ L H+ ++H D+K EN+LL IK+ DFG
Sbjct: 195 QGFSLPL-VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------ 247
Query: 174 RCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGR--LPFDD 231
S+ ++ T S Y +PE++ G Y + D+WS+G +L ++ G LP +D
Sbjct: 248 ---SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPI-DMWSLGCILAELLTGYPLLPGED 303
Query: 232 SS 233
Sbjct: 304 EG 305
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 10 DDIDRKVTVLESH---GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLK 66
DD V V H Y V K+IG GS+ V A + VA+K+V K
Sbjct: 82 DDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-------K 134
Query: 67 KFLPREIEVVKGLKH------PNLIRFLQAIET-THRVYIIMEYAE-NGSLFDIIRG--- 115
+F + E ++ L+H N + + +E T R +I M + + +L+++I+
Sbjct: 135 RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF 194
Query: 116 QGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHM 173
QG+ + R++ +L+ L H+ ++H D+K EN+LL IK+ DFG
Sbjct: 195 QGFSLPL-VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------ 247
Query: 174 RCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGR--LPFDD 231
S+ ++ T S Y +PE++ G Y + D+WS+G +L ++ G LP +D
Sbjct: 248 ---SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPI-DMWSLGCILAELLTGYPLLPGED 303
Query: 232 SS 233
Sbjct: 304 EG 305
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
+H T+ + +G G Y V R + +VA+KI S D F E+ L+
Sbjct: 7 AHQITLLECVGKGRYGEV--WRGSWQGENVAVKIFSS----RDEKSWFRETELYNTVMLR 60
Query: 81 HPNLIRFLQAIETTH----RVYIIMEYAENGSLFDIIRGQGYIDEIRARRWFGQLLEALQ 136
H N++ F+ + T+ ++++I Y E GSL+D ++ +D + R + L
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLA 119
Query: 137 YCH--------ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF 188
+ H + + HRD+K +N+L+ + ++D G A H + +N D +
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ-STNQLDVG-NNPR 177
Query: 189 CGSYAYASPEILQGIPYAPHLS-----DIWSMGVVLF 220
G+ Y +PE+L DIW+ G+VL+
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIR- 86
++IG+G + V A+ H D ++ +V+ Y + RE++ + L H N++
Sbjct: 17 ELIGSGGFGQVFKAK---HRIDGKTYVIKRVK----YNNEKAEREVKALAKLDHVNIVHY 69
Query: 87 ------FLQAIETTHR---------VYIIMEYAENGSLFDII---RGQGYIDEIRARRWF 128
F ET+ + ++I ME+ + G+L I RG+ +D++ A F
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALELF 128
Query: 129 GQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF 188
Q+ + + Y H + +++RD+K N+ L +K+ DFG ++ ++
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-------TSLKNDGKRXRS 181
Query: 189 CGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV 223
G+ Y SPE + Y + D++++G++L ++
Sbjct: 182 KGTLRYMSPEQISSQDYGKEV-DLYALGLILAELL 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 21 SHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK 80
S + I+G G + V R VA+K + + + L+ E+E++
Sbjct: 29 SDNFXNKNILGRGGFGKVYKGRLA-DGXLVAVKRLKEERTQGGELQ--FQTEVEMISMAV 85
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIR----GQGYIDEIRARRWFGQLLEALQ 136
H NL+R T ++ Y NGS+ +R Q +D + +R L
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 137 YCHER---GVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYA 193
Y H+ ++HRD+K N+LLD ++ + DFG A+ + D + G
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-----MDYKDXHVXXAVRGXIG 200
Query: 194 YASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
+ +PE L + +D++ GV+L ++ G+ FD
Sbjct: 201 HIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 39/253 (15%)
Query: 50 VAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGS 108
VAIK + K + P L++ E + L+HPN++ L + + +I Y +G
Sbjct: 42 VAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 109 L--FDIIRGQ----GYIDEIRARR----------WFGQLLEALQYCHERGVVHRDIKCEN 152
L F ++R G D+ R + Q+ ++Y VVH+D+ N
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN 158
Query: 153 LLLDSDYNIKLSDFGFARAHMRCRSNAAD------NSLSETFCGSYAYASPEILQGIPYA 206
+L+ N+K+SD G R AAD NSL + +PE + ++
Sbjct: 159 VLVYDKLNVKISDLGLFR-----EVYAADYYKLLGNSLLPI-----RWMAPEAIMYGKFS 208
Query: 207 PHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
SDIWS GVVL+ + +G P+ S ++++ ++N+ P + L+
Sbjct: 209 ID-SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECW 267
Query: 266 SPVQT-RPRLKTI 277
+ + RPR K I
Sbjct: 268 NEFPSRRPRFKDI 280
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK----VQAPPDYLKKFLPR------EI 73
Y + + +G G ++TV LA+ ++ VA+KIV +A D +K L R
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK-LLQRVNDADNTK 79
Query: 74 EVVKGLKHPNLIRFLQAI--ETTHRVYIIMEYAENG-SLFDIIRGQGY--IDEIRARRWF 128
E G H +++ L + + V+++M + G +L +I+ + I I ++
Sbjct: 80 EDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 129 GQLLEALQYCHER-GVVHRDIKCENLLL---DSDYN---IKLSDFGFARAHMRCRSNAAD 181
QLL L Y H R G++H DIK EN+L+ DS N IK++D G A + +N+
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 197
Query: 182 NSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
+ Y SPE+L G P+ +DIWS ++F ++ G F+
Sbjct: 198 ---------TREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFE 236
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSK----VQAPPDYLKKFLPR------EI 73
Y + + +G G ++TV LA+ ++ VA+KIV +A D +K L R
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK-LLQRVNDADNTK 79
Query: 74 EVVKGLKHPNLIRFLQAI--ETTHRVYIIMEYAENG-SLFDIIRGQGY--IDEIRARRWF 128
E G H +++ L + + V+++M + G +L +I+ + I I ++
Sbjct: 80 EDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 129 GQLLEALQYCHER-GVVHRDIKCENLLL---DSDYN---IKLSDFGFARAHMRCRSNAAD 181
QLL L Y H R G++H DIK EN+L+ DS N IK++D G A + +N+
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 197
Query: 182 NSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFD 230
+ Y SPE+L G P+ +DIWS ++F ++ G F+
Sbjct: 198 ---------TREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFE 236
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 34/230 (14%)
Query: 8 VQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK 67
+Q + R +T+LE +G G Y V R + +VA+KI S D
Sbjct: 2 MQRTVARDITLLEC--------VGKGRYGEV--WRGSWQGENVAVKIFSS----RDEKSW 47
Query: 68 FLPREIEVVKGLKHPNLIRFLQAIETTH----RVYIIMEYAENGSLFDIIRGQGYIDEIR 123
F E+ L+H N++ F+ + T+ ++++I Y E GSL+D ++ +D +
Sbjct: 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVS 106
Query: 124 ARRWFGQLLEALQYCH--------ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRC 175
R + L + H + + HRD+K +N+L+ + ++D G A H +
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ- 165
Query: 176 RSNAADNSLSETFCGSYAYASPEILQGIPYAPHLS-----DIWSMGVVLF 220
+N D + G+ Y +PE+L DIW+ G+VL+
Sbjct: 166 STNQLDVG-NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 39/253 (15%)
Query: 50 VAIKIVS-KVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGS 108
VAIK + K + P L++ E + L+HPN++ L + + +I Y +G
Sbjct: 59 VAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 109 L--FDIIRGQ----GYIDEIRARR----------WFGQLLEALQYCHERGVVHRDIKCEN 152
L F ++R G D+ R + Q+ ++Y VVH+D+ N
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN 175
Query: 153 LLLDSDYNIKLSDFGFARAHMRCRSNAAD------NSLSETFCGSYAYASPEILQGIPYA 206
+L+ N+K+SD G R AAD NSL + +PE + ++
Sbjct: 176 VLVYDKLNVKISDLGLFR-----EVYAADYYKLLGNSLLPI-----RWMAPEAIMYGKFS 225
Query: 207 PHLSDIWSMGVVLFAMV-FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
SDIWS GVVL+ + +G P+ S ++++ ++N+ P + L+
Sbjct: 226 ID-SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECW 284
Query: 266 SPVQT-RPRLKTI 277
+ + RPR K I
Sbjct: 285 NEFPSRRPRFKDI 297
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 48/251 (19%)
Query: 81 HPNLIRFLQAIETTHR-----VYIIMEYAENGSLFDIIRGQGY-IDEIRARRWFGQLLEA 134
HP++++ +E T R YI+MEY SL R +G + A + ++L A
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL---KRSKGQKLPVAEAIAYLLEILPA 194
Query: 135 LQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAY 194
L Y H G+V+ D+K EN++L ++ +KL D G + + NS + G+ +
Sbjct: 195 LSYLHSIGLVYNDLKPENIML-TEEQLKLIDLG---------AVSRINSFGYLY-GTPGF 243
Query: 195 ASPEILQGIPYAPHLSDIWSMGVVLFAMVF------GR----LPFDD------SSVNELL 238
+PEI++ P +DI+++G L A+ GR LP DD S LL
Sbjct: 244 QAPEIVRTGPTV--ATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLL 301
Query: 239 KQVQN---KVTFPKQPEVSTECKELISNILSPVQ--TRPRLKTIAEDRWLKPKPKSRGVD 293
++ + + F E+S + ++ +++ RP L TI P + GVD
Sbjct: 302 RRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTI-----FSPSRSTFGVD 356
Query: 294 KAEAELDHYID 304
A D Y+D
Sbjct: 357 LLVAHTDVYLD 367
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 48/228 (21%)
Query: 28 KIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
++IG+G + V A+ H D ++ +V+ Y + RE++ + L H N++ +
Sbjct: 18 ELIGSGGFGQVFKAK---HRIDGKTYVIRRVK----YNNEKAEREVKALAKLDHVNIVHY 70
Query: 88 L--------------QAIET---------------THRVYIIMEYAENGSLFDII---RG 115
++E+ T ++I ME+ + G+L I RG
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 116 QGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRC 175
+ +D++ A F Q+ + + Y H + ++HRD+K N+ L +K+ DFG +
Sbjct: 131 EK-LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS---- 185
Query: 176 RSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV 223
N + S+ G+ Y SPE + Y + D++++G++L ++
Sbjct: 186 LKNDGKRTRSK---GTLRYMSPEQISSQDYGKEV-DLYALGLILAELL 229
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 38/234 (16%)
Query: 8 VQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK 67
+Q + R+V ++E +G G Y V R H VA+KI S D
Sbjct: 2 MQRTVARQVALVEC--------VGKGRYGEV--WRGLWHGESVAVKIFSS----RDEQSW 47
Query: 68 FLPREIEVVKGLKHPNLIRFLQAIETTH----RVYIIMEYAENGSLFDIIRGQGYIDEIR 123
F EI L+H N++ F+ + T+ ++++I Y E+GSL+D ++ Q ++
Sbjct: 48 FRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT-LEPHL 106
Query: 124 ARRWFGQLLEALQYCH--------ERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRC 175
A R L + H + + HRD K N+L+ S+ ++D G A H
Sbjct: 107 ALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH--- 163
Query: 176 RSNAAD--NSLSETFCGSYAYASPEILQ-----GIPYAPHLSDIWSMGVVLFAM 222
S +D + + G+ Y +PE+L + +DIW+ G+VL+ +
Sbjct: 164 -SQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 128 FGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSET 187
F Q+ EA+++ H +G++HRD+K N+ D +K+ DFG A + +
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 188 FC------GSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFG 225
+ G+ Y SPE + G Y+ H DI+S+G++LF +++
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYS-HKVDIFSLGLILFELLYS 272
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 30 IGTGSYATVKLARSTRHS--GDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRF 87
+G G++ V LA S D + V ++ P +K RE E++ L+H ++++F
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 88 LQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEI-------RARRWFG---------QL 131
+ ++ EY ++G L +R G I +A+ G Q+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 132 LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGS 191
+ Y + VHRD+ N L+ ++ +K+ DFG +R + +
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR---------------DVYSTD 187
Query: 192 YAYASPEILQGIPYAP----------HLSDIWSMGVVLFAM-VFGRLPFDDSSVNELLKQ 240
Y + I + P SD+WS GV+L+ + +G+ P+ S E+++
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 247
Query: 241 V-QNKVTFPKQPEVSTECKELISNILSPVQTRPR 273
+ Q +V ++P V KE+ +L Q P+
Sbjct: 248 ITQGRVL--ERPRVCP--KEVYDVMLGCWQREPQ 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 120/288 (41%), Gaps = 33/288 (11%)
Query: 1 MIDSTVQVQDDIDRKV--TVLESHGYTVGKIIGTGSYATVKLARSTRHSGD---VAIKIV 55
M+DS + + D++ K+ ++ +T+G+++G G + +V+ A+ + G VA+K++
Sbjct: 1 MLDS-LGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML 59
Query: 56 SKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRV-------YIIMEYAENGS 108
+++FL RE +K HP++ + L + R +I+ + ++G
Sbjct: 60 KADIIASSDIEEFL-REAACMKEFDHPHVAK-LVGVSLRSRAKGRLPIPMVILPFMKHGD 117
Query: 109 LFDIIRGQGYIDEI------RARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIK 162
L + + R+ + ++Y R +HRD+ N +L D +
Sbjct: 118 LHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC 177
Query: 163 LSDFGFARAHMRCRSNAADNSLSETFCGS---YAYASPEILQGIPYAPHLSDIWSMGVVL 219
++DFG +R C S + + E L Y H SD+W+ GV +
Sbjct: 178 VADFGLSR-------KIYSGDYYRQGCASKLPVKWLALESLADNLYTVH-SDVWAFGVTM 229
Query: 220 FA-MVFGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILS 266
+ M G+ P+ E+ + + PE E +L+ S
Sbjct: 230 WEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWS 277
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 57/289 (19%)
Query: 8 VQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK 67
VQ I R + + ES IG G + V R +VA+KI S + ++
Sbjct: 36 VQRTIARTIVLQES--------IGKGRFGEV--WRGKWRGEEVAVKIFSSRE------ER 79
Query: 68 FLPREIEVVKG--LKHPNLIRFLQAIE----TTHRVYIIMEYAENGSLFDIIRG-----Q 116
RE E+ + L+H N++ F+ A T +++++ +Y E+GSLFD + +
Sbjct: 80 SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 139
Query: 117 GYID-EIRARRWFGQL-LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMR 174
G I + L +E + + + HRD+K +N+L+ + ++D G A
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----- 194
Query: 175 CRSNAADNSLS---ETFCGSYAYASPEILQGIPYAPHL-----SDIWSMGVVLFAM---- 222
R ++A +++ G+ Y +PE+L H +DI++MG+V + +
Sbjct: 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 254
Query: 223 -VFG-----RLPF-----DDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ G +LP+ D SV E+ K V + P P C+ L
Sbjct: 255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 303
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 57/289 (19%)
Query: 8 VQDDIDRKVTVLESHGYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKK 67
VQ I R + + ES IG G + V R +VA+KI S + +
Sbjct: 23 VQRTIARTIVLQES--------IGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWF--- 69
Query: 68 FLPREIEVVKG--LKHPNLIRFLQAIE----TTHRVYIIMEYAENGSLFD-----IIRGQ 116
RE E+ + L+H N++ F+ A T +++++ +Y E+GSLFD + +
Sbjct: 70 ---REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 126
Query: 117 GYID-EIRARRWFGQL-LEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMR 174
G I + L +E + + + HRD+K +N+L+ + ++D G A
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----- 181
Query: 175 CRSNAADNSLS---ETFCGSYAYASPEILQGIPYAPHL-----SDIWSMGVVLFAM---- 222
R ++A +++ G+ Y +PE+L H +DI++MG+V + +
Sbjct: 182 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 241
Query: 223 -VFG-----RLPF-----DDSSVNELLKQVQNKVTFPKQPEVSTECKEL 260
+ G +LP+ D SV E+ K V + P P C+ L
Sbjct: 242 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 290
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 32/228 (14%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+Y V+ R +A+K + + + + +I + + + P + F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM-RTVDCPFTVTFYG 73
Query: 90 AIETTHRVYIIMEYAENGSLFD------IIRGQGYIDEIRARRWFGQLLEALQYCHER-G 142
A+ V+I ME + D I +GQ ++I + +++AL++ H +
Sbjct: 74 ALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLS 130
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQG 202
V+HRD+K N+L+++ +K+ DFG + D+ + G Y +PE +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDDVAKDIDAGCKPYMAPERIN- 182
Query: 203 IPYAPHL--------SDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQV 241
P L SDIWS+G+ + + R P+D + + LKQV
Sbjct: 183 ----PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 24/228 (10%)
Query: 27 GKIIGTGSYATVKLARS-TRHSGDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL-KHP 82
GK +G G++ V A + D +K+ K+ + K+ L E++++ L +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDE-----------IRAR---RWF 128
N++ L A V +I EY G L + +R + + E + R +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 129 GQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF 188
Q+ + + + + +HRD+ N+LL + + K+ DFG AR M N ++ +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM----NDSNYIVKGNA 226
Query: 189 CGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVN 235
+ +PE + Y SD+WS G++L+ + G P+ VN
Sbjct: 227 RLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVN 273
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFLQ 89
+G G+Y V+ R +A+K + + + + +I + + + P + F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM-RTVDCPFTVTFYG 117
Query: 90 AIETTHRVYIIMEYAENGSLFD------IIRGQGYIDEIRARRWFGQLLEALQYCHER-G 142
A+ V+I ME + D I +GQ ++I + +++AL++ H +
Sbjct: 118 ALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLS 174
Query: 143 VVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF-CGSYAYASPEILQ 201
V+HRD+K N+L+++ +K+ DFG S +S+++T G Y +PE +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGI--------SGYLVDSVAKTIDAGCKPYMAPERIN 226
Query: 202 GIPYAPHL--------SDIWSMGVVLFAMVFGRLPFDD-SSVNELLKQV 241
P L SDIWS+G+ + + R P+D + + LKQV
Sbjct: 227 -----PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Query: 10 DDIDRKVTVLESH---GYTVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLK 66
DD V V H Y V K+IG G + V A + VA+K+V K
Sbjct: 82 DDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNE-------K 134
Query: 67 KFLPREIEVVKGLKH------PNLIRFLQAIET-THRVYIIMEYAE-NGSLFDIIRG--- 115
+F + E ++ L+H N + + +E T R +I M + + +L+++I+
Sbjct: 135 RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF 194
Query: 116 QGYIDEIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSD--YNIKLSDFGFARAHM 173
QG+ + R++ +L+ L H+ ++H D+K EN+LL IK+ DFG
Sbjct: 195 QGFSLPL-VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------ 247
Query: 174 RCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGR--LPFDD 231
S+ ++ S Y +PE++ G Y + D+WS+G +L ++ G LP +D
Sbjct: 248 ---SSCYEHQRVYXXIQSRFYRAPEVILGARYGMPI-DMWSLGCILAELLTGYPLLPGED 303
Query: 232 SS 233
Sbjct: 304 EG 305
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 24/228 (10%)
Query: 27 GKIIGTGSYATVKLARS-TRHSGDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL-KHP 82
GK +G G++ V A + D +K+ K+ + K+ L E++++ L +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYIDEIRAR--------------RWF 128
N++ L A V +I EY G L + +R + + E +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 129 GQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETF 188
Q+ + + + + +HRD+ N+LL + + K+ DFG AR M N ++ +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM----NDSNYIVKGNA 226
Query: 189 CGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVN 235
+ +PE + Y SD+WS G++L+ + G P+ VN
Sbjct: 227 RLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVN 273
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 34/279 (12%)
Query: 4 STVQVQDDID---RKVTVLESHGY-TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ 59
S+V V D+ + K+T+L G + G + + +K TR VA+K V++
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESA 59
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYI 119
+ + ++ FL E V+KG +++R L + ++ME +G L +R
Sbjct: 60 SLRERIE-FL-NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 120 DEIRARRWFGQLLEALQ----------YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFA 169
E R L E +Q Y + + VHRD+ N ++ D+ +K+ DFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 170 R--AHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGR 226
R L + +PE L+ + SD+WS GVVL+ +
Sbjct: 178 RDIXETDXXRKGGKGLLP------VRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAE 230
Query: 227 LPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNIL 265
P+ S ++LK V + + QP+ C E +++++
Sbjct: 231 QPYQGLSNEQVLKFVMDG-GYLDQPD---NCPERVTDLM 265
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 35/290 (12%)
Query: 4 STVQVQDDID---RKVTVLESHGY-TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ 59
S+V V D+ + K+T+L G + G + + +K TR VA+K V++
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESA 56
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYI 119
+ + ++ FL E V+KG +++R L + ++ME +G L +R
Sbjct: 57 SLRERIE-FL-NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 114
Query: 120 DEIRARRWFGQLLEALQ----------YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFA 169
E R L E +Q Y + + VHRD+ N ++ D+ +K+ DFG
Sbjct: 115 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Query: 170 R--AHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGR 226
R L + +PE L+ + SD+WS GVVL+ +
Sbjct: 175 RDIXETDXXRKGGKGLLP------VRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAE 227
Query: 227 LPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPV-QTRPRLK 275
P+ S ++LK V + + QP+ C E +++++ Q P+++
Sbjct: 228 QPYQGLSNEQVLKFVMDG-GYLDQPD---NCPERVTDLMRMCWQFNPKMR 273
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 35/290 (12%)
Query: 4 STVQVQDDID---RKVTVLESHGY-TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ 59
S+V V D+ + K+T+L G + G + + +K TR VA+K V++
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESA 59
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYI 119
+ + ++ FL E V+KG +++R L + ++ME +G L +R
Sbjct: 60 SLRERIE-FL-NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 120 DEIRARRWFGQLLEALQ----------YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFA 169
E R L E +Q Y + + VHRD+ N ++ D+ +K+ DFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 170 R--AHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGR 226
R L + +PE L+ + SD+WS GVVL+ +
Sbjct: 178 RDIXETDXXRKGGKGLLP------VRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAE 230
Query: 227 LPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPV-QTRPRLK 275
P+ S ++LK V + + QP+ C E +++++ Q P+++
Sbjct: 231 QPYQGLSNEQVLKFVMDG-GYLDQPD---NCPERVTDLMRMCWQFNPKMR 276
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 41/293 (13%)
Query: 4 STVQVQDDID---RKVTVLESHGY-TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ 59
S+V V D+ + K+T+L G + G + + +K TR VA+K V++
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESA 59
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYI 119
+ + ++ FL E V+KG +++R L + ++ME +G L +R
Sbjct: 60 SLRERIE-FL-NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 120 DEIRARRWFGQLLEALQ----------YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFA 169
E R L E +Q Y + + VHRD+ N ++ D+ +K+ DFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 170 R-----AHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV- 223
R A+ R + +PE L+ + SD+WS GVVL+ +
Sbjct: 178 RDIYETAYYRKGGKG---------LLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITS 227
Query: 224 FGRLPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPV-QTRPRLK 275
P+ S ++LK V + + QP+ C E +++++ Q P+++
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDG-GYLDQPD---NCPERVTDLMRMCWQFNPKMR 276
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 27 GKIIGTGSYATVKLARS-TRHSGDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL-KHP 82
GK +G G++ V A + D +K+ K+ + K+ L E++++ L +H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-----GQGYI--------DEIRAR---R 126
N++ L A V +I EY G L + +R G Y +++ +R
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 127 WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSE 186
+ Q+ + + + + +HRD+ N+LL + + K+ DFG AR M N ++ +
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM----NDSNYIVKG 226
Query: 187 TFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVN 235
+ +PE + Y SD+WS G++L+ + G P+ VN
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVN 275
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 27 GKIIGTGSYATVKLARS-----TRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKGL-K 80
GK++G+G++ V A + T S VA+K++ + + ++ L E++++ L
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE--REALMSELKMMTQLGS 107
Query: 81 HPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ---------GYIDEIRARR----- 126
H N++ L A + +Y+I EY G L + +R + Y ++ R
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 127 ---------WFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMR--- 174
+ Q+ + +++ + VHRD+ N+L+ +K+ DFG AR M
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 175 --CRSNAADNSLSETFCGSYAYASPE-ILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFD 230
R NA + +PE + +GI SD+WS G++L+ + G P+
Sbjct: 228 YVVRGNAR---------LPVKWMAPESLFEGIYTIK--SDVWSYGILLWEIFSLGVNPYP 276
Query: 231 DSSVN-ELLKQVQNKVTFPKQPEVSTECKELISNILSPVQTRPR 273
V+ K +QN QP +TE +I +R R
Sbjct: 277 GIPVDANFYKLIQNGFKM-DQPFYATEEIYIIMQSCWAFDSRKR 319
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 108/254 (42%), Gaps = 22/254 (8%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIK-IVSKVQAPPDYLKKFLPREIEVVKGLKHPNLIRFL 88
+G GSY V RS A+K +S + P D +K G +HP +R
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG-QHPCCVRLE 123
Query: 89 QAIETTHRVYIIMEYAENGSLFDIIRGQGY-IDEIRARRWFGQLLEALQYCHERGVVHRD 147
QA E +Y+ E SL G + E + + L AL + H +G+VH D
Sbjct: 124 QAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182
Query: 148 IKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAP 207
+K N+ L KL DFG + A + E G Y +PE+LQG Y
Sbjct: 183 VKPANIFLGPRGRCKLGDFGL----LVELGTAGAGEVQE---GDPRYMAPELLQG-SYG- 233
Query: 208 HLSDIWSMGVVLFAMVFG-RLPFDDSSVNELLKQVQNKVTFPK-QPEVSTECKELISNIL 265
+D++S+G+ + + LP E +Q++ P+ +S+E + ++ +L
Sbjct: 234 TAADVFSLGLTILEVACNMELPHG----GEGWQQLRQGYLPPEFTAGLSSELRSVLVMML 289
Query: 266 SPVQTRPRLKTIAE 279
P P+L+ AE
Sbjct: 290 EP---DPKLRATAE 300
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 45/248 (18%)
Query: 24 YTVGKIIGTGSYATVKLARSTRHSG-DVAIKIVSKVQAPPDYLKKFLPREIEVVKGLK-- 80
Y + +G G++ V + G VA+KIV V D + EI+V++ L
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTT 71
Query: 81 HPN-LIRFLQAIE-TTHRVYIIMEYAENG-SLFDIIRGQGYI----DEIRARRWFGQLLE 133
PN R +Q +E H +I + + G S +D I+ G++ D IR + Q+ +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAY--QICK 129
Query: 134 ALQYCHERGVVHRDIKCENLLL-DSDY------------------NIKLSDFGFARAHMR 174
++ + H + H D+K EN+L SDY +IK+ DFG
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG------- 182
Query: 175 CRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMVFGRLPFDDSSV 234
S D+ T + Y +PE++ + ++ D+WS+G +L G F
Sbjct: 183 --SATYDDEHHSTLVSTRHYRAPEVILALGWS-QPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 235 NELLKQVQ 242
E L ++
Sbjct: 240 KEHLAMME 247
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 49/267 (18%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG--LKHPNLIRF 87
IG G + V R +VA+KI S + + RE E+ + L+H N++ F
Sbjct: 14 IGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWF------REAEIYQTVMLRHENILGF 65
Query: 88 LQAIE----TTHRVYIIMEYAENGSLFDIIRG-----QGYID-EIRARRWFGQL-LEALQ 136
+ A T +++++ +Y E+GSLFD + +G I + L +E +
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS---ETFCGSYA 193
+ + HRD+K +N+L+ + ++D G A R ++A +++ G+
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKR 180
Query: 194 YASPEILQGIPYAPHL-----SDIWSMGVVLFAM-----VFG-----RLPF-----DDSS 233
Y +PE+L H +DI++MG+V + + + G +LP+ D S
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 240
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKEL 260
V E+ K V + P P C+ L
Sbjct: 241 VEEMRKVVCEQKLRPNIPNRWQSCEAL 267
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 49/267 (18%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG--LKHPNLIRF 87
IG G + V R +VA+KI S + + RE E+ + L+H N++ F
Sbjct: 17 IGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWF------REAEIYQTVMLRHENILGF 68
Query: 88 LQAIE----TTHRVYIIMEYAENGSLFDIIRG-----QGYID-EIRARRWFGQL-LEALQ 136
+ A T +++++ +Y E+GSLFD + +G I + L +E +
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS---ETFCGSYA 193
+ + HRD+K +N+L+ + ++D G A R ++A +++ G+
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKR 183
Query: 194 YASPEILQGIPYAPHL-----SDIWSMGVVLFAM-----VFG-----RLPF-----DDSS 233
Y +PE+L H +DI++MG+V + + + G +LP+ D S
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 243
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKEL 260
V E+ K V + P P C+ L
Sbjct: 244 VEEMRKVVCEQKLRPNIPNRWQSCEAL 270
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 33/237 (13%)
Query: 27 GKIIGTGSYATVKLARS-TRHSGDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL-KHP 82
GK +G G++ V A + D +K+ K+ + K+ L E++++ L +H
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 83 NLIRFLQAIETTHRVYIIMEYAENGSLFDIIR-------------GQ---------GYID 120
N++ L A V +I EY G L + +R GQ G
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 121 EIRARRWFG-QLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNA 179
E+R F Q+ + + + + +HRD+ N+LL + + K+ DFG AR M N
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM----ND 211
Query: 180 ADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFDDSSVN 235
++ + + +PE + Y SD+WS G++L+ + G P+ VN
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVN 267
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 49/267 (18%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG--LKHPNLIRF 87
IG G + V R +VA+KI S + + RE E+ + L+H N++ F
Sbjct: 11 IGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWF------REAEIYQTVMLRHENILGF 62
Query: 88 LQAIE----TTHRVYIIMEYAENGSLFDIIRG-----QGYID-EIRARRWFGQL-LEALQ 136
+ A T +++++ +Y E+GSLFD + +G I + L +E +
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS---ETFCGSYA 193
+ + HRD+K +N+L+ + ++D G A R ++A +++ G+
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKR 177
Query: 194 YASPEILQGIPYAPHL-----SDIWSMGVVLFAM-----VFG-----RLPF-----DDSS 233
Y +PE+L H +DI++MG+V + + + G +LP+ D S
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKEL 260
V E+ K V + P P C+ L
Sbjct: 238 VEEMRKVVCEQKLRPNIPNRWQSCEAL 264
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 49/267 (18%)
Query: 30 IGTGSYATVKLARSTRHSGDVAIKIVSKVQAPPDYLKKFLPREIEVVKG--LKHPNLIRF 87
IG G + V R +VA+KI S + + RE E+ + L+H N++ F
Sbjct: 12 IGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWF------REAEIYQTVMLRHENILGF 63
Query: 88 LQAIE----TTHRVYIIMEYAENGSLFDIIRG-----QGYID-EIRARRWFGQL-LEALQ 136
+ A T +++++ +Y E+GSLFD + +G I + L +E +
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 137 YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAADNSLS---ETFCGSYA 193
+ + HRD+K +N+L+ + ++D G A R ++A +++ G+
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKR 178
Query: 194 YASPEILQGIPYAPHL-----SDIWSMGVVLFAM-----VFG-----RLPF-----DDSS 233
Y +PE+L H +DI++MG+V + + + G +LP+ D S
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 238
Query: 234 VNELLKQVQNKVTFPKQPEVSTECKEL 260
V E+ K V + P P C+ L
Sbjct: 239 VEEMRKVVCEQKLRPNIPNRWQSCEAL 265
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 25 TVGKIIGTGSYATVKLARSTRHS---GDVAIKIVSKVQAPPDYL--KKFLPREIEVVKGL 79
+ GK +G G++ K+ +T + D A+ + K+ P +L ++ L E++V+ L
Sbjct: 49 SFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 80 -KHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQ--GYI----------------D 120
H N++ L A +I EY G L + +R + +I D
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 121 EIRARRWFGQLLEALQYCHERGVVHRDIKCENLLLDSDYNIKLSDFGFARAHMRCRSNAA 180
+ Q+ + + + + +HRD+ N+LL K+ DFG AR H++ SN
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-HIKNDSNYV 225
Query: 181 DNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGRLPFD----DSSVN 235
+ + +PE + Y SD+WS G+ L+ + G P+ DS
Sbjct: 226 VKGNARL---PVKWMAPESIFNCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 236 ELLKQ 240
+++K+
Sbjct: 282 KMIKE 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 35/290 (12%)
Query: 4 STVQVQDDID---RKVTVLESHGY-TVGKIIGTGSYATVKLARSTRHSGDVAIKIVSKVQ 59
S+V V D+ + K+T+L G + G + + +K TR VA+K V++
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESA 59
Query: 60 APPDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAENGSLFDIIRGQGYI 119
+ + ++ FL E V+KG +++R L + ++ME +G L +R
Sbjct: 60 SLRERIE-FL-NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 120 DEIRARRWFGQLLEALQ----------YCHERGVVHRDIKCENLLLDSDYNIKLSDFGFA 169
E R L E +Q Y + + VHRD+ N ++ D+ +K+ DFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 170 R--AHMRCRSNAADNSLSETFCGSYAYASPEILQGIPYAPHLSDIWSMGVVLFAMV-FGR 226
R L + +PE L+ + SD+WS GVVL+ +
Sbjct: 178 RDIYETDYYRKGGKGLL------PVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAE 230
Query: 227 LPFDDSSVNELLKQVQNKVTFPKQPEVSTECKELISNILSPV-QTRPRLK 275
P+ S ++LK V + + QP+ C E +++++ Q P+++
Sbjct: 231 QPYQGLSNEQVLKFVMDG-GYLDQPD---NCPERVTDLMRMCWQFNPKMR 276
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,240,440
Number of Sequences: 62578
Number of extensions: 375686
Number of successful extensions: 4056
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 893
Number of HSP's gapped (non-prelim): 1290
length of query: 316
length of database: 14,973,337
effective HSP length: 99
effective length of query: 217
effective length of database: 8,778,115
effective search space: 1904850955
effective search space used: 1904850955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)