BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11195
         (346 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q7ZWB7|BBS5_DANRE Bardet-Biedl syndrome 5 protein homolog OS=Danio rerio GN=bbs5 PE=2
           SV=1
          Length = 342

 Score =  295 bits (756), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/291 (49%), Positives = 205/291 (70%), Gaps = 22/291 (7%)

Query: 1   MWNSLSVLRINLSIGLACIQQVSTKVTFSPMIYRT-------------FEFIFTNLVPGN 47
           +W+SL++ R+NLS+G  CI  ++T+   S +  +T             FEFIFTN+VPG+
Sbjct: 59  IWHSLALPRVNLSVGYNCIINITTRTANSKLRGQTEALYILTKSNNTRFEFIFTNVVPGS 118

Query: 48  TRHFTSVLGVYRAYNSSKLYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNL 107
            R FTSV+ V+RAY +SK+YRDLKLRGA+++ K+L++LP+E +Y +  GVWNLSSDQGNL
Sbjct: 119 PRLFTSVIAVHRAYETSKMYRDLKLRGALIQNKQLRLLPQEQVYDKINGVWNLSSDQGNL 178

Query: 108 GVFMATNIRVVWYADMNESFNISLPYIQIASIRLRESKFGLALVIESYEQSGGYVLGFRI 167
           G F  TN+R+VW+A+MNESFN+S+PY+QI SIR+R+SKFGLALVIES +Q+GGYVLGF+I
Sbjct: 179 GTFFITNVRIVWHANMNESFNVSIPYLQIRSIRIRDSKFGLALVIESSQQTGGYVLGFKI 238

Query: 168 DPQETMQTVCKELQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQ-EDIAELEEDDNML 226
           DP + +Q   KE+ S H++++  P +GV+Y + +     EE  V Q  D  E+E D++  
Sbjct: 239 DPMDKLQDAVKEINSLHKVYSANPIFGVEYEMEEKPQPLEELTVEQPPDDVEIEPDEH-- 296

Query: 227 DLSNTLTLYSADHMGGGTASANRKLVFSPELGLCVEQPKPGFTMARLWEVI 277
             ++  T Y AD    G    +R+ VFS ELGL +E+ K GFT+  LWEV+
Sbjct: 297 --TDAFTAYFAD----GNKQHDREPVFSEELGLAIEKLKDGFTLQGLWEVM 341



 Score = 91.7 bits (226), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 48/283 (16%)

Query: 66  LYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNLGVFMATNIRVVWYADMNE 125
           L+ D  +R  I   +++K  P E +      + +   + G+ G  + TN+R++W++    
Sbjct: 8   LWEDRDVRFDITA-QQMKTRPGEALIDCLDSIEDTKGNNGDRGRLLVTNLRIIWHSLALP 66

Query: 126 SFNISLPY-------IQIASIRLRESKFGLALVIESYEQSGGYVLGFRIDPQETMQTVCK 178
             N+S+ Y        + A+ +LR     L ++ +S      ++    +     + T   
Sbjct: 67  RVNLSVGYNCIINITTRTANSKLRGQTEALYILTKSNNTRFEFIFTNVVPGSPRLFT--- 123

Query: 179 ELQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQEDIAELEEDDNMLDLSNTLTLYSAD 238
            + + HR + T+  Y       D+ +      ++Q     L   + + D  N +   S+D
Sbjct: 124 SVIAVHRAYETSKMY------RDLKL---RGALIQNKQLRLLPQEQVYDKINGVWNLSSD 174

Query: 239 HMGGGTASANRKLVFSPELGLCVEQPKPGFTMARLWEVIPSSDMNESFNISLPYIQIASI 298
               GT                       F +  +  ++  ++MNESFN+S+PY+QI SI
Sbjct: 175 QGNLGT-----------------------FFITNV-RIVWHANMNESFNVSIPYLQIRSI 210

Query: 299 RLRESKFGLALVIESYEQSGGYVLGFRIDP----QVRTKKINC 337
           R+R+SKFGLALVIES +Q+GGYVLGF+IDP    Q   K+IN 
Sbjct: 211 RIRDSKFGLALVIESSQQTGGYVLGFKIDPMDKLQDAVKEINS 253


>sp|Q4R649|BBS5_MACFA Bardet-Biedl syndrome 5 protein homolog OS=Macaca fascicularis
           GN=BBS5 PE=2 SV=2
          Length = 341

 Score =  295 bits (755), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 143/291 (49%), Positives = 204/291 (70%), Gaps = 22/291 (7%)

Query: 1   MWNSLSVLRINLSIGLACIQQVSTKVTFSPMIYRT-------------FEFIFTNLVPGN 47
           +W+SL++ R+N+S+G  CI  ++T+   S +  +T             FEFIFTNLVPG+
Sbjct: 58  LWHSLALSRVNVSVGYNCILNITTRTANSKLRGQTEALYILTKCNSTRFEFIFTNLVPGS 117

Query: 48  TRHFTSVLGVYRAYNSSKLYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNL 107
            R FTSV+ V+RAY +SK+YRD KLR A+++ K+L++LP+EH+Y +  GVWNLSSDQGNL
Sbjct: 118 PRLFTSVMAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQEHVYDKINGVWNLSSDQGNL 177

Query: 108 GVFMATNIRVVWYADMNESFNISLPYIQIASIRLRESKFGLALVIESYEQSGGYVLGFRI 167
           G F  TN+R+VW+A+MN+SFN+S+PY+QI SI++R+SKFGLALVIES +QSGGYVLGF+I
Sbjct: 178 GTFFITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKI 237

Query: 168 DPQETMQTVCKELQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQ-EDIAELEEDDNML 226
           DP E +Q   KE+ S H++++ +P +GVDY + +     E   V Q +D  E++ DD+  
Sbjct: 238 DPVEKLQESVKEINSLHKVYSASPIFGVDYEMEEKPQPLEALTVEQIQDDVEIDSDDH-- 295

Query: 227 DLSNTLTLYSADHMGGGTASANRKLVFSPELGLCVEQPKPGFTMARLWEVI 277
             ++    Y AD    G    +R+ VFS ELGL +E+ K GFT+  LWEV+
Sbjct: 296 --TDAFVAYFAD----GNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEVM 340



 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 45/267 (16%)

Query: 80  KELKMLPREHIYSQYQGVWNLSSDQGNLGVFMATNIRVVWYADMNESFNISLPYIQIASI 139
           +++K  P E +      + +   + G+ G  + TN+R++W++      N+S+ Y  I +I
Sbjct: 20  QQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRILWHSLALSRVNVSVGYNCILNI 79

Query: 140 RLRESKFGL-----ALVIESYEQSGGYVLGF-RIDPQETMQTVCKELQSYHRIHTTTPEY 193
             R +   L     AL I +   S  +   F  + P      +   + + HR + T+  Y
Sbjct: 80  TTRTANSKLRGQTEALYILTKCNSTRFEFIFTNLVPGSP--RLFTSVMAVHRAYETSKMY 137

Query: 194 GVDYVVSDVAILAEEAPVVQEDIAELEEDDNMLDLSNTLTLYSADHMGGGTASANRKLVF 253
             D+ +         + ++Q     L   +++ D  N +   S+D    GT         
Sbjct: 138 R-DFKL--------RSALIQNKQLRLLPQEHVYDKINGVWNLSSDQGNLGT--------- 179

Query: 254 SPELGLCVEQPKPGFTMARLWEVIPSSDMNESFNISLPYIQIASIRLRESKFGLALVIES 313
                         F +  +  ++  ++MN+SFN+S+PY+QI SI++R+SKFGLALVIES
Sbjct: 180 --------------FFITNV-RIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIES 224

Query: 314 YEQSGGYVLGFRIDP----QVRTKKIN 336
            +QSGGYVLGF+IDP    Q   K+IN
Sbjct: 225 SQQSGGYVLGFKIDPVEKLQESVKEIN 251


>sp|Q9CZQ9|BBS5_MOUSE Bardet-Biedl syndrome 5 protein homolog OS=Mus musculus GN=Bbs5
           PE=2 SV=1
          Length = 341

 Score =  295 bits (754), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 144/291 (49%), Positives = 204/291 (70%), Gaps = 22/291 (7%)

Query: 1   MWNSLSVLRINLSIGLACIQQVSTKVTFSPMIYRT-------------FEFIFTNLVPGN 47
           +W+SL++ R+NLSIG  CI  ++T+   S +  +T             FEFIFTNLVPG+
Sbjct: 58  IWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYILTKCNTTRFEFIFTNLVPGS 117

Query: 48  TRHFTSVLGVYRAYNSSKLYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNL 107
            R FTSV+ V+RAY +SK+YRD KLR A+++ K+L++LP+EH+Y +  GVWNLSSDQGNL
Sbjct: 118 PRLFTSVIAVHRAYETSKMYRDFKLRSAVIQNKQLRLLPQEHVYDKINGVWNLSSDQGNL 177

Query: 108 GVFMATNIRVVWYADMNESFNISLPYIQIASIRLRESKFGLALVIESYEQSGGYVLGFRI 167
           G F  TN+R+VW+A+MN+SFN+S+PY+QI SI++R+SKFGLALVIES +QSGGYVLGF+I
Sbjct: 178 GTFFITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKI 237

Query: 168 DPQETMQTVCKELQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQ-EDIAELEEDDNML 226
           DP E +Q   KE+ S H++++ +P +GV+Y + +     E   V Q +D  E++ DD+  
Sbjct: 238 DPVEKLQESVKEINSLHKVYSASPIFGVNYEMEEKPQPLEALTVEQIQDDVEIDSDDH-- 295

Query: 227 DLSNTLTLYSADHMGGGTASANRKLVFSPELGLCVEQPKPGFTMARLWEVI 277
             ++    Y AD    G    +R+ VFS ELGL +E+ K GFT+  LWEV+
Sbjct: 296 --TDAFVAYFAD----GNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEVM 340



 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 46/281 (16%)

Query: 66  LYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNLGVFMATNIRVVWYADMNE 125
           L+ D  +R   V  +++K  P E +      + +   + G+ G  + TN+R++W++    
Sbjct: 7   LWEDRDVRFD-VSSQQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRIIWHSLALP 65

Query: 126 SFNISLPYIQIASIRLRESKFGL-----ALVIESYEQSGGYVLGF-RIDPQETMQTVCKE 179
             N+S+ Y  I +I  R +   L     AL I +   +  +   F  + P      +   
Sbjct: 66  RVNLSIGYNCILNITTRTANSKLRGQTEALYILTKCNTTRFEFIFTNLVPGSP--RLFTS 123

Query: 180 LQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQEDIAELEEDDNMLDLSNTLTLYSADH 239
           + + HR + T+  Y  D+ +         + V+Q     L   +++ D  N +   S+D 
Sbjct: 124 VIAVHRAYETSKMYR-DFKL--------RSAVIQNKQLRLLPQEHVYDKINGVWNLSSDQ 174

Query: 240 MGGGTASANRKLVFSPELGLCVEQPKPGFTMARLWEVIPSSDMNESFNISLPYIQIASIR 299
              GT                       F +  +  ++  ++MN+SFN+S+PY+QI SI+
Sbjct: 175 GNLGT-----------------------FFITNV-RIVWHANMNDSFNVSIPYLQIRSIK 210

Query: 300 LRESKFGLALVIESYEQSGGYVLGFRIDP----QVRTKKIN 336
           +R+SKFGLALVIES +QSGGYVLGF+IDP    Q   K+IN
Sbjct: 211 IRDSKFGLALVIESSQQSGGYVLGFKIDPVEKLQESVKEIN 251


>sp|Q8N3I7|BBS5_HUMAN Bardet-Biedl syndrome 5 protein OS=Homo sapiens GN=BBS5 PE=1 SV=1
          Length = 341

 Score =  292 bits (747), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 142/291 (48%), Positives = 203/291 (69%), Gaps = 22/291 (7%)

Query: 1   MWNSLSVLRINLSIGLACIQQVSTKVTFSPMIYRT-------------FEFIFTNLVPGN 47
           +W+SL++ R+N+S+G  CI  ++T+   S +  +T             FEFIFTNLVPG+
Sbjct: 58  LWHSLALSRVNVSVGYNCILNITTRTANSKLRGQTEALYILTKCNSTRFEFIFTNLVPGS 117

Query: 48  TRHFTSVLGVYRAYNSSKLYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNL 107
            R FTSV+ V+RAY +SK+YRD KLR A+++ K+L++LP+EH+Y +  GVWNLSSDQGNL
Sbjct: 118 PRLFTSVMAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQEHVYDKINGVWNLSSDQGNL 177

Query: 108 GVFMATNIRVVWYADMNESFNISLPYIQIASIRLRESKFGLALVIESYEQSGGYVLGFRI 167
           G F  TN+R+VW+A+MN+SFN+S+PY+QI SI++R+SKFGLALVIES +QSGGYVLGF+I
Sbjct: 178 GTFFITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKI 237

Query: 168 DPQETMQTVCKELQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQ-EDIAELEEDDNML 226
           DP E +Q   KE+ S H++++ +P +GVDY + +     E   V Q +D  E++ D +  
Sbjct: 238 DPVEKLQESVKEINSLHKVYSASPIFGVDYEMEEKPQPLEALTVEQIQDDVEIDSDGH-- 295

Query: 227 DLSNTLTLYSADHMGGGTASANRKLVFSPELGLCVEQPKPGFTMARLWEVI 277
             ++    Y AD    G    +R+ VFS ELGL +E+ K GFT+  LWEV+
Sbjct: 296 --TDAFVAYFAD----GNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEVM 340



 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 45/267 (16%)

Query: 80  KELKMLPREHIYSQYQGVWNLSSDQGNLGVFMATNIRVVWYADMNESFNISLPYIQIASI 139
           +++K  P E +      + +   + G+ G  + TN+R++W++      N+S+ Y  I +I
Sbjct: 20  QQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRILWHSLALSRVNVSVGYNCILNI 79

Query: 140 RLRESKFGL-----ALVIESYEQSGGYVLGF-RIDPQETMQTVCKELQSYHRIHTTTPEY 193
             R +   L     AL I +   S  +   F  + P      +   + + HR + T+  Y
Sbjct: 80  TTRTANSKLRGQTEALYILTKCNSTRFEFIFTNLVPGSP--RLFTSVMAVHRAYETSKMY 137

Query: 194 GVDYVVSDVAILAEEAPVVQEDIAELEEDDNMLDLSNTLTLYSADHMGGGTASANRKLVF 253
             D+ +         + ++Q     L   +++ D  N +   S+D    GT         
Sbjct: 138 R-DFKL--------RSALIQNKQLRLLPQEHVYDKINGVWNLSSDQGNLGT--------- 179

Query: 254 SPELGLCVEQPKPGFTMARLWEVIPSSDMNESFNISLPYIQIASIRLRESKFGLALVIES 313
                         F +  +  ++  ++MN+SFN+S+PY+QI SI++R+SKFGLALVIES
Sbjct: 180 --------------FFITNV-RIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIES 224

Query: 314 YEQSGGYVLGFRIDP----QVRTKKIN 336
            +QSGGYVLGF+IDP    Q   K+IN
Sbjct: 225 SQQSGGYVLGFKIDPVEKLQESVKEIN 251


>sp|Q66IS6|BBS5_XENLA Bardet-Biedl syndrome 5 protein homolog OS=Xenopus laevis GN=bbs5
           PE=2 SV=1
          Length = 365

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 125/238 (52%), Positives = 177/238 (74%), Gaps = 14/238 (5%)

Query: 1   MWNSLSVLRINLSIGLACIQQVSTKVTFSPMIYRT-------------FEFIFTNLVPGN 47
           +W+SL++ R+NL++G  CI  ++T+   S +  +T             FEFIFTNLVPG+
Sbjct: 59  IWHSLALPRVNLAVGYNCIINITTRTANSKLRGQTEALYILTKCNNTRFEFIFTNLVPGS 118

Query: 48  TRHFTSVLGVYRAYNSSKLYRDLKLRGAIVRRKELKMLPREHIYSQYQGVWNLSSDQGNL 107
            R FTSV+ V+RAY +SK+YRDLKLRGA+++ K+LK+LPRE +Y +  GVWNLSSDQGNL
Sbjct: 119 PRLFTSVIAVHRAYETSKMYRDLKLRGALIQNKQLKLLPREQVYDKINGVWNLSSDQGNL 178

Query: 108 GVFMATNIRVVWYADMNESFNISLPYIQIASIRLRESKFGLALVIESYEQSGGYVLGFRI 167
           G F  TN+R+VW+A+MN+SFN+S+PY+QI SI++R+SKFGLALVIES +QSGGYVLGF+I
Sbjct: 179 GTFFITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKI 238

Query: 168 DPQETMQTVCKELQSYHRIHTTTPEYGVDYVVSDVAILAEEAPVVQ-EDIAELEEDDN 224
           DP E +Q   KE+ S HR+++ +P +GV+Y + +     EE  + Q +D  E+E D++
Sbjct: 239 DPVEKLQDSVKEINSLHRVYSASPIFGVEYEMEEKPQALEELTIEQVQDDVEIEADEH 296



 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 47/268 (17%)

Query: 80  KELKMLPREHIYSQYQGVWNLSSDQGNLGVFMATNIRVVWYADMNESFNISLPYIQIASI 139
           +++KM P E +      + +   + G+ G  + TN+RV+W++      N+++ Y  I +I
Sbjct: 21  QQMKMRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRVIWHSLALPRVNLAVGYNCIINI 80

Query: 140 -------RLRESKFGLALVIESYEQSGGYVLGFRIDPQETMQTVCKELQSYHRIHTTTPE 192
                  +LR     L ++ +       ++    +     + T    + + HR + T+  
Sbjct: 81  TTRTANSKLRGQTEALYILTKCNNTRFEFIFTNLVPGSPRLFT---SVIAVHRAYETSKM 137

Query: 193 YGVDYVVSDVAILAEEAPVVQEDIAELEEDDNMLDLSNTLTLYSADHMGGGTASANRKLV 252
           Y       D+ +      ++Q    +L   + + D  N +   S+D    GT        
Sbjct: 138 Y------RDLKL---RGALIQNKQLKLLPREQVYDKINGVWNLSSDQGNLGT-------- 180

Query: 253 FSPELGLCVEQPKPGFTMARLWEVIPSSDMNESFNISLPYIQIASIRLRESKFGLALVIE 312
                          F +  +  ++  ++MN+SFN+S+PY+QI SI++R+SKFGLALVIE
Sbjct: 181 ---------------FFITNV-RIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIE 224

Query: 313 SYEQSGGYVLGFRIDP----QVRTKKIN 336
           S +QSGGYVLGF+IDP    Q   K+IN
Sbjct: 225 SSQQSGGYVLGFKIDPVEKLQDSVKEIN 252


>sp|Q09221|CPNA2_CAEEL Copine family protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=4
          Length = 7705

 Score = 37.7 bits (86), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 12   LSIGLACIQQVSTKVTFSPMIYRTFEFIFTNLVPGNTRHFTSVLGVYRAYNSSKL-YRDL 70
            +S+  + +  +S+   FS  I  + + +F+NL+   T H  S +G      ++ + Y+D+
Sbjct: 1889 MSVRASLLLTISSNSNFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQDI 1948

Query: 71   -KLRGA----IVRRKE-LKMLPREHIYSQYQGVWNLSSDQGNLGVFMATNIRVVWYADMN 124
             ++  A    I R  E LK   RE +    +  WN ++DQ  + V +   I  + Y+ +N
Sbjct: 1949 PEMLAASKLWISRNSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDSI-YSSLN 2007


>sp|A0RJ87|LON_BACAH Lon protease OS=Bacillus thuringiensis (strain Al Hakam) GN=lon
           PE=3 SV=1
          Length = 794

 Score = 32.0 bits (71), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 20/109 (18%)

Query: 141 LRESKFGLALVIESYEQSGGYVLGFRID------PQETMQTVCKELQSYHRIHTTTPEYG 194
           LRE    +   +   E  GG V   R        P+ETM+   KEL  Y ++  ++ E G
Sbjct: 248 LREQMKAIQTELGDKEGKGGEVEELREKIEQSGMPEETMKAALKELDRYEKLPASSAESG 307

Query: 195 V--DYVVSDVAILAEEAPVVQEDIAELEEDDNMLDLSNTLTLYSADHMG 241
           V  +Y+   +A+   +A             ++M+DL+++  + + DH G
Sbjct: 308 VIRNYMDWLLALPWTDAT------------EDMIDLAHSEEILNKDHYG 344


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.136    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,857,416
Number of Sequences: 539616
Number of extensions: 5273485
Number of successful extensions: 11820
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11793
Number of HSP's gapped (non-prelim): 21
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)