Query psy11202
Match_columns 360
No_of_seqs 337 out of 2180
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 20:46:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11202.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11202hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3shq_A UBLCP1; phosphatase, hy 100.0 2.7E-78 9.1E-83 584.4 22.5 313 4-317 5-319 (320)
2 3qle_A TIM50P; chaperone, mito 100.0 2E-37 6.7E-42 281.1 13.3 161 128-307 24-187 (204)
3 2ght_A Carboxy-terminal domain 100.0 3.2E-33 1.1E-37 249.2 14.5 155 133-306 10-180 (181)
4 2hhl_A CTD small phosphatase-l 100.0 2.1E-30 7.2E-35 233.7 14.9 153 130-301 17-188 (195)
5 3ef0_A RNA polymerase II subun 99.9 5.2E-25 1.8E-29 216.2 14.8 123 136-275 16-172 (372)
6 3ef1_A RNA polymerase II subun 99.9 1.1E-24 3.9E-29 216.8 13.3 137 136-289 24-195 (442)
7 1v5t_A 8430435I17RIK protein; 99.8 1.8E-19 6.1E-24 142.4 6.9 79 3-81 6-85 (90)
8 1wgg_A Ubiquitin carboxyl-term 99.8 9E-19 3.1E-23 140.1 9.2 75 3-81 6-81 (96)
9 1v86_A DNA segment, CHR 7, way 99.7 4E-17 1.4E-21 130.2 8.8 75 3-81 16-90 (95)
10 2kd0_A LRR repeats and ubiquit 99.6 6.8E-16 2.3E-20 120.5 9.4 74 4-80 12-85 (85)
11 2bwf_A Ubiquitin-like protein 99.6 1.1E-15 3.8E-20 116.1 9.8 74 3-79 3-76 (77)
12 1wxv_A BAG-family molecular ch 99.6 4.5E-16 1.5E-20 123.0 7.9 77 2-81 5-87 (92)
13 2dzm_A FAS-associated factor 1 99.6 5.9E-16 2E-20 124.5 7.5 75 4-80 9-83 (100)
14 2hj8_A Interferon-induced 17 k 99.6 2E-15 6.8E-20 118.4 9.2 78 1-81 1-79 (88)
15 3phx_B Ubiquitin-like protein 99.6 3E-15 1E-19 114.6 9.0 75 1-78 1-76 (79)
16 2lxa_A Ubiquitin-like protein 99.6 6.5E-16 2.2E-20 121.2 4.5 74 5-81 2-80 (87)
17 2kk8_A Uncharacterized protein 99.6 4.2E-15 1.4E-19 115.8 7.5 72 5-79 11-84 (84)
18 3m62_B UV excision repair prot 99.6 3.9E-15 1.3E-19 121.0 7.1 74 5-81 2-76 (106)
19 3m63_B Ubiquitin domain-contai 99.6 1.3E-15 4.4E-20 122.8 3.9 73 4-79 28-100 (101)
20 4a20_A Ubiquitin-like protein 99.5 8.1E-15 2.8E-19 117.5 7.3 73 4-79 19-96 (98)
21 2wyq_A HHR23A, UV excision rep 99.5 2.2E-14 7.6E-19 111.1 9.4 76 3-81 4-83 (85)
22 4eew_A Large proline-rich prot 99.5 3.5E-14 1.2E-18 110.9 8.8 69 4-76 17-86 (88)
23 1uel_A HHR23B, UV excision rep 99.5 5.4E-14 1.8E-18 111.8 9.8 74 5-81 1-78 (95)
24 2dzi_A Ubiquitin-like protein 99.5 3.1E-14 1.1E-18 109.1 7.9 73 4-79 7-80 (81)
25 4fbj_B NEDD8; effector-HOST ta 99.5 2.7E-14 9.2E-19 112.0 7.6 74 5-81 1-75 (88)
26 2kan_A Uncharacterized protein 99.5 2.9E-14 1E-18 113.3 7.8 75 3-80 14-89 (94)
27 3v6c_B Ubiquitin; structural g 99.5 4.2E-14 1.4E-18 111.4 8.6 72 4-78 17-89 (91)
28 2klc_A Ubiquilin-1; ubiquitin- 99.5 5.5E-14 1.9E-18 113.2 8.8 74 4-80 25-98 (101)
29 1ndd_A NEDD8, protein (ubiquit 99.5 7.1E-14 2.4E-18 105.4 8.2 71 5-78 1-72 (76)
30 1yqb_A Ubiquilin 3; structural 99.5 7.1E-14 2.4E-18 112.3 8.5 76 3-81 21-96 (100)
31 3plu_A Ubiquitin-like modifier 99.5 8.9E-14 3E-18 109.6 8.5 71 3-76 20-91 (93)
32 3dbh_I NEDD8; cell cycle, acti 99.5 8.7E-14 3E-18 108.3 8.5 72 4-78 12-84 (88)
33 4dwf_A HLA-B-associated transc 99.5 1.3E-13 4.5E-18 108.1 9.2 75 3-81 4-79 (90)
34 2l7r_A Ubiquitin-like protein 99.5 4.8E-14 1.6E-18 111.8 6.7 71 4-78 19-89 (93)
35 3mtn_B UBA80, ubcep1, ubiquiti 99.5 1.3E-13 4.3E-18 106.5 8.7 72 4-78 3-75 (85)
36 4hcn_B Polyubiquitin, ubiquiti 99.5 7E-14 2.4E-18 111.8 7.3 72 4-78 22-94 (98)
37 3a9j_A Ubiquitin; protein comp 99.5 1.3E-13 4.4E-18 104.0 8.4 72 5-79 1-73 (76)
38 1v5o_A 1700011N24RIK protein; 99.5 1.3E-13 4.5E-18 111.0 8.7 75 4-81 7-87 (102)
39 1wx8_A Riken cDNA 4931431F19; 99.5 6.7E-14 2.3E-18 111.3 6.7 76 3-81 16-91 (96)
40 1wju_A NEDD8 ultimate buster-1 99.5 7.3E-14 2.5E-18 112.0 6.8 74 5-81 16-94 (100)
41 1yx5_B Ubiquitin; proteasome, 99.5 1.6E-13 5.5E-18 109.5 8.8 88 5-105 1-89 (98)
42 1ttn_A DC-UBP, dendritic cell- 99.5 1.4E-13 4.6E-18 111.8 8.5 75 4-81 23-98 (106)
43 1wh3_A 59 kDa 2'-5'-oligoadeny 99.5 1.8E-13 6.2E-18 106.4 8.9 74 4-80 7-81 (87)
44 1uh6_A Ubiquitin-like 5; beta- 99.5 7.6E-14 2.6E-18 111.8 6.8 70 4-76 28-98 (100)
45 2faz_A Ubiquitin-like containi 99.5 2.1E-13 7.1E-18 103.9 8.6 72 4-78 2-76 (78)
46 1sif_A Ubiquitin; hydrophobic 99.5 1.3E-13 4.6E-18 108.0 7.6 72 5-79 10-82 (88)
47 3n3k_B Ubiquitin; hydrolase, p 99.5 1E-13 3.5E-18 107.1 6.9 72 4-78 3-75 (85)
48 1wx7_A Ubiquilin 3; ubiquitin- 99.4 2.2E-13 7.5E-18 110.4 9.0 75 4-81 17-91 (106)
49 3k9o_B Ubiquitin, UBB+1; E2-25 99.4 2.7E-13 9.4E-18 107.5 8.5 73 5-80 2-75 (96)
50 1j8c_A Ubiquitin-like protein 99.4 2.8E-13 9.5E-18 113.3 8.5 75 4-81 32-106 (125)
51 1wgd_A Homocysteine-responsive 99.4 1.4E-13 4.9E-18 108.8 6.3 75 4-81 7-88 (93)
52 3vdz_A Ubiquitin-40S ribosomal 99.4 3.5E-13 1.2E-17 110.3 8.6 72 4-78 35-107 (111)
53 1wy8_A NP95-like ring finger p 99.4 4.9E-13 1.7E-17 104.5 8.8 76 3-81 6-84 (89)
54 1x1m_A Ubiquitin-like protein 99.4 2.5E-13 8.4E-18 110.4 6.8 74 5-81 13-102 (107)
55 4ajy_B Transcription elongatio 99.4 1.1E-12 3.7E-17 107.8 9.8 74 4-80 2-82 (118)
56 2ojr_A Ubiquitin; lanthide-bin 99.4 1E-12 3.5E-17 107.5 9.1 72 4-78 35-107 (111)
57 2fnj_B Transcription elongatio 99.4 1.1E-12 3.7E-17 108.1 9.0 75 4-81 2-83 (118)
58 3b1l_X E3 ubiquitin-protein li 99.1 3.6E-14 1.2E-18 107.6 0.0 71 5-78 1-72 (76)
59 1v6e_A Cytoskeleton-associated 99.4 1.2E-12 4.3E-17 103.9 8.8 74 4-80 7-89 (95)
60 2uyz_B Small ubiquitin-related 99.4 7.7E-13 2.6E-17 101.0 7.3 74 1-78 1-75 (79)
61 1we6_A Splicing factor, putati 99.4 1.1E-12 3.8E-17 107.1 8.3 73 4-79 27-104 (111)
62 3rt3_B Ubiquitin-like protein 99.4 1.4E-12 4.7E-17 112.9 8.8 74 4-79 2-77 (159)
63 1t0y_A Tubulin folding cofacto 99.4 1.5E-12 5E-17 108.4 8.6 76 1-79 3-87 (122)
64 2kdi_A Ubiquitin, vacuolar pro 99.4 1.3E-12 4.4E-17 107.5 7.9 75 4-81 9-84 (114)
65 3u30_A Ubiquitin, linear DI-ub 99.4 1.9E-12 6.3E-17 113.7 9.1 75 4-81 20-95 (172)
66 2daf_A FLJ35834 protein; hypot 99.3 9E-13 3.1E-17 107.8 5.9 75 4-81 15-92 (118)
67 2kjr_A CG11242; UBL, ubiquitin 99.3 2.9E-12 9.8E-17 102.0 8.0 70 4-76 15-93 (95)
68 4b6w_A Tubulin-specific chaper 99.3 5.5E-12 1.9E-16 98.6 8.6 72 4-78 2-83 (86)
69 1we7_A SF3A1 protein; structur 99.3 4E-12 1.4E-16 104.6 7.7 73 4-79 25-108 (115)
70 2kj6_A Tubulin folding cofacto 99.3 5.9E-12 2E-16 100.6 8.4 73 3-78 13-95 (97)
71 3q3f_A Ribonuclease/ubiquitin 99.3 6.2E-12 2.1E-16 112.1 8.3 73 5-80 106-179 (189)
72 3b08_A Polyubiquitin-C, ubiqui 99.3 7.9E-12 2.7E-16 106.6 8.7 74 5-81 1-75 (152)
73 3l0w_B Monoubiquitinated proli 99.3 8.5E-12 2.9E-16 109.5 9.0 72 5-79 1-73 (169)
74 4dbg_A Ranbp-type and C3HC4-ty 99.3 1.6E-11 5.4E-16 99.2 9.2 70 4-76 24-97 (105)
75 1wyw_B Ubiquitin-like protein 99.3 8.9E-12 3E-16 99.4 7.6 72 4-78 21-93 (97)
76 1v2y_A 3300001G02RIK protein; 99.3 2.7E-12 9.2E-17 103.9 4.6 74 4-80 7-97 (105)
77 2kdb_A Homocysteine-responsive 99.3 4E-12 1.4E-16 101.9 5.5 70 4-76 23-99 (99)
78 3rt3_B Ubiquitin-like protein 99.3 1.3E-11 4.5E-16 106.6 9.2 73 4-79 81-154 (159)
79 1wia_A Hypothetical ubiquitin- 99.3 1.1E-11 3.7E-16 98.2 8.0 72 4-81 7-80 (95)
80 3u5e_m 60S ribosomal protein L 99.3 5.1E-13 1.7E-17 112.0 0.0 74 5-81 1-75 (128)
81 2kzr_A Ubiquitin thioesterase 99.3 1.3E-11 4.3E-16 96.2 7.8 76 5-81 1-80 (86)
82 2dzj_A Synaptic glycoprotein S 99.2 1.2E-11 4.1E-16 97.0 7.3 71 4-75 10-85 (88)
83 2gow_A HCG-1 protein, ubiquiti 99.2 2.9E-11 1E-15 100.8 7.9 74 3-79 16-100 (125)
84 3b08_A Polyubiquitin-C, ubiqui 99.2 4.5E-11 1.6E-15 101.8 9.2 72 5-79 77-149 (152)
85 3u5c_f 40S ribosomal protein S 99.2 1.8E-12 6.3E-17 111.8 0.0 74 5-81 1-75 (152)
86 3ai5_A Yeast enhanced green fl 99.2 5.6E-11 1.9E-15 113.3 9.1 72 3-77 232-304 (307)
87 1oqy_A HHR23A, UV excision rep 99.2 2.9E-11 9.9E-16 118.2 6.9 74 4-80 7-84 (368)
88 1wgh_A Ubiquitin-like 3, HCG-1 99.1 7.8E-11 2.7E-15 97.0 8.0 73 4-79 16-99 (116)
89 3u30_A Ubiquitin, linear DI-ub 99.1 7.5E-11 2.6E-15 103.4 8.0 72 4-78 96-168 (172)
90 1wf9_A NPL4 family protein; be 99.1 2E-10 6.8E-15 93.2 8.0 75 4-81 7-97 (107)
91 1se9_A Ubiquitin family; ubiqu 99.1 2.9E-10 9.8E-15 94.7 7.6 74 3-79 15-103 (126)
92 1wjn_A Tubulin-folding protein 98.9 4.9E-09 1.7E-13 83.3 8.7 73 3-78 8-92 (97)
93 2xzm_9 RPS31E; ribosome, trans 98.7 1.2E-09 4.3E-14 96.9 0.0 67 5-79 1-68 (189)
94 2pjh_A Protein NPL4, nuclear p 98.7 2E-08 6.8E-13 77.2 5.4 74 1-75 1-77 (80)
95 3a4r_A Nfatc2-interacting prot 98.6 1.3E-07 4.6E-12 72.2 8.0 71 4-77 7-79 (79)
96 2io1_B Small ubiquitin-related 98.6 1.4E-07 4.9E-12 74.6 7.8 72 4-78 7-79 (94)
97 1wm3_A Ubiquitin-like protein 98.6 1.7E-07 5.8E-12 70.3 7.8 69 5-76 2-71 (72)
98 2io0_B Small ubiquitin-related 98.5 1.9E-07 6.5E-12 73.4 7.6 72 4-78 5-77 (91)
99 2wm8_A MDP-1, magnesium-depend 98.5 1.7E-07 5.8E-12 81.9 7.7 119 138-273 27-164 (187)
100 3kbb_A Phosphorylated carbohyd 98.5 4.2E-08 1.4E-12 86.7 2.6 93 161-268 83-179 (216)
101 2pr7_A Haloacid dehalogenase/e 98.4 5.8E-08 2E-12 79.3 1.3 111 138-272 2-117 (137)
102 2d07_B Ubiquitin-like protein 98.4 1.1E-06 3.6E-11 69.4 8.3 71 4-77 17-88 (93)
103 1wz0_A Ubiquitin-like protein 98.4 1.1E-06 3.9E-11 70.6 8.6 71 4-77 24-95 (104)
104 3ib6_A Uncharacterized protein 98.3 3.8E-07 1.3E-11 79.9 4.8 125 137-272 2-141 (189)
105 2k8h_A Small ubiquitin protein 98.3 1.3E-06 4.5E-11 71.0 7.4 74 4-80 26-100 (110)
106 2eke_C Ubiquitin-like protein 98.3 1.4E-06 4.6E-11 70.4 7.4 71 4-77 31-101 (106)
107 2fpr_A Histidine biosynthesis 98.3 1.5E-06 5.2E-11 75.5 8.1 126 136-273 12-160 (176)
108 3kzx_A HAD-superfamily hydrola 98.3 1.5E-06 5.2E-11 77.0 7.2 97 161-273 102-204 (231)
109 3l8h_A Putative haloacid dehal 98.2 1.2E-06 4E-11 75.5 5.8 123 138-272 1-144 (179)
110 3e58_A Putative beta-phosphogl 98.2 8.4E-07 2.9E-11 76.8 3.7 96 162-273 89-189 (214)
111 4g9b_A Beta-PGM, beta-phosphog 98.2 6E-07 2.1E-11 81.6 2.5 119 162-297 95-223 (243)
112 2ah5_A COG0546: predicted phos 98.1 1.4E-06 4.9E-11 76.9 4.5 95 161-272 83-180 (210)
113 3nuq_A Protein SSM1, putative 98.1 1.8E-06 6.2E-11 79.5 5.2 96 161-268 141-244 (282)
114 2gmw_A D,D-heptose 1,7-bisphos 98.1 2.9E-06 9.9E-11 75.7 5.5 129 136-269 23-171 (211)
115 3mc1_A Predicted phosphatase, 98.1 2.6E-06 8.9E-11 75.0 4.9 96 161-272 85-185 (226)
116 2pib_A Phosphorylated carbohyd 98.1 1.3E-06 4.5E-11 75.6 2.8 94 161-270 83-181 (216)
117 2p9j_A Hypothetical protein AQ 98.1 1.8E-06 6E-11 73.3 3.2 112 138-270 9-124 (162)
118 3kd3_A Phosphoserine phosphohy 98.0 6.4E-06 2.2E-10 71.5 6.8 100 162-267 82-184 (219)
119 3m9l_A Hydrolase, haloacid deh 98.0 1.9E-06 6.5E-11 75.3 3.4 122 137-273 5-171 (205)
120 4ex6_A ALNB; modified rossman 98.0 1.6E-06 5.6E-11 77.0 2.6 95 162-272 104-203 (237)
121 3m1y_A Phosphoserine phosphata 98.0 3.2E-06 1.1E-10 74.1 4.4 101 161-269 74-181 (217)
122 4gib_A Beta-phosphoglucomutase 98.0 1.5E-06 5.2E-11 79.1 1.6 94 162-272 116-213 (250)
123 4eze_A Haloacid dehalogenase-l 98.0 3.8E-06 1.3E-10 80.3 4.4 148 117-270 85-286 (317)
124 2no4_A (S)-2-haloacid dehaloge 98.0 2.7E-06 9.4E-11 76.0 3.1 93 163-271 106-203 (240)
125 3s6j_A Hydrolase, haloacid deh 98.0 4.6E-06 1.6E-10 73.4 4.5 96 161-272 90-190 (233)
126 2i6x_A Hydrolase, haloacid deh 98.0 1.7E-06 5.9E-11 75.6 1.6 96 162-273 89-194 (211)
127 3qxg_A Inorganic pyrophosphata 98.0 5.7E-06 1.9E-10 74.1 5.0 96 161-273 108-210 (243)
128 3sd7_A Putative phosphatase; s 98.0 4.2E-06 1.4E-10 74.7 4.0 96 161-272 109-210 (240)
129 1zrn_A L-2-haloacid dehalogena 97.9 3.5E-06 1.2E-10 74.7 3.2 95 162-272 95-194 (232)
130 1nnl_A L-3-phosphoserine phosp 97.9 5.7E-06 2E-10 73.3 4.5 105 161-272 85-196 (225)
131 2oda_A Hypothetical protein ps 97.9 1.2E-05 4E-10 71.3 6.4 116 136-272 4-131 (196)
132 3um9_A Haloacid dehalogenase, 97.9 4.7E-06 1.6E-10 73.3 3.7 96 161-272 95-195 (230)
133 3dv9_A Beta-phosphoglucomutase 97.9 1.4E-05 4.7E-10 71.1 6.8 96 161-273 107-209 (247)
134 2hdo_A Phosphoglycolate phosph 97.9 2.7E-06 9.3E-11 74.3 1.5 96 161-272 82-181 (209)
135 4efo_A Serine/threonine-protei 97.9 2.5E-05 8.6E-10 61.4 6.8 64 12-78 22-88 (94)
136 3umb_A Dehalogenase-like hydro 97.9 9.2E-06 3.1E-10 71.7 4.9 97 161-272 98-198 (233)
137 2p11_A Hypothetical protein; p 97.9 4E-06 1.4E-10 75.1 2.1 92 162-272 96-190 (231)
138 2nyv_A Pgpase, PGP, phosphogly 97.9 7.3E-06 2.5E-10 72.9 3.6 92 161-268 82-178 (222)
139 3ed5_A YFNB; APC60080, bacillu 97.8 6.6E-06 2.3E-10 72.7 2.9 96 162-272 103-203 (238)
140 3kyd_D Small ubiquitin-related 97.8 5.7E-05 1.9E-09 61.6 8.0 71 4-77 40-111 (115)
141 2w43_A Hypothetical 2-haloalka 97.8 3.1E-06 1.1E-10 73.7 0.5 96 162-272 74-169 (201)
142 3cnh_A Hydrolase family protei 97.8 6.7E-06 2.3E-10 71.2 2.6 94 163-272 87-184 (200)
143 2hsz_A Novel predicted phospha 97.8 1.1E-05 3.6E-10 73.0 3.8 95 162-272 114-213 (243)
144 3qnm_A Haloacid dehalogenase-l 97.8 1.8E-05 6.2E-10 69.8 5.2 98 161-274 106-208 (240)
145 3ddh_A Putative haloacid dehal 97.8 1.2E-05 4.2E-10 70.3 4.0 93 162-272 105-201 (234)
146 1qq5_A Protein (L-2-haloacid d 97.8 1.4E-05 4.7E-10 72.4 4.4 94 162-272 93-190 (253)
147 3pge_A SUMO-modified prolifera 97.8 5.1E-05 1.7E-09 67.8 7.6 69 5-76 30-98 (200)
148 4eek_A Beta-phosphoglucomutase 97.8 6.4E-06 2.2E-10 74.5 1.6 98 161-272 109-211 (259)
149 3zvl_A Bifunctional polynucleo 97.8 7.2E-05 2.5E-09 74.0 9.3 105 135-256 55-184 (416)
150 3d6j_A Putative haloacid dehal 97.7 2E-05 6.7E-10 68.7 4.5 96 161-272 88-188 (225)
151 3e8m_A Acylneuraminate cytidyl 97.7 2.6E-05 8.8E-10 66.1 5.1 109 137-272 3-121 (164)
152 3mn1_A Probable YRBI family ph 97.7 2.4E-05 8.3E-10 68.6 5.0 112 137-271 18-135 (189)
153 4dcc_A Putative haloacid dehal 97.7 3.8E-06 1.3E-10 74.8 -0.4 96 163-274 113-218 (229)
154 3bwv_A Putative 5'(3')-deoxyri 97.7 0.00015 5.2E-09 62.3 9.5 26 161-186 68-93 (180)
155 3n07_A 3-deoxy-D-manno-octulos 97.7 2.8E-05 9.5E-10 69.0 4.8 110 137-271 24-141 (195)
156 3tix_A Ubiquitin-like protein 97.7 6.1E-05 2.1E-09 66.5 6.7 72 4-78 57-128 (207)
157 3l5k_A Protein GS1, haloacid d 97.7 1.3E-05 4.5E-10 72.0 2.5 99 161-273 111-217 (250)
158 3u26_A PF00702 domain protein; 97.7 2.2E-05 7.6E-10 69.2 3.9 95 162-272 100-199 (234)
159 3fvv_A Uncharacterized protein 97.7 1.8E-05 6.2E-10 70.2 3.3 104 162-269 92-201 (232)
160 2zg6_A Putative uncharacterize 97.7 3.8E-05 1.3E-09 68.0 5.3 96 162-273 95-192 (220)
161 2o2x_A Hypothetical protein; s 97.7 3.1E-05 1.1E-09 69.0 4.8 127 137-268 30-176 (218)
162 2hoq_A Putative HAD-hydrolase 97.7 1.3E-05 4.6E-10 71.6 2.3 94 163-272 95-194 (241)
163 3n1u_A Hydrolase, HAD superfam 97.7 2.9E-05 1E-09 68.3 4.3 109 137-270 18-134 (191)
164 2hcf_A Hydrolase, haloacid deh 97.6 2.4E-05 8.1E-10 69.0 3.5 98 161-272 92-196 (234)
165 1k1e_A Deoxy-D-mannose-octulos 97.6 1.5E-05 5.3E-10 69.1 2.1 114 137-271 7-124 (180)
166 3mmz_A Putative HAD family hyd 97.6 6.5E-05 2.2E-09 65.0 5.8 110 137-270 11-126 (176)
167 3p96_A Phosphoserine phosphata 97.6 2.3E-05 7.7E-10 77.2 3.1 131 134-270 181-363 (415)
168 2fea_A 2-hydroxy-3-keto-5-meth 97.6 0.00012 4.1E-09 65.7 7.6 101 161-270 76-187 (236)
169 1te2_A Putative phosphatase; s 97.6 2.5E-05 8.5E-10 68.1 3.0 96 162-273 94-194 (226)
170 3ij5_A 3-deoxy-D-manno-octulos 97.6 3.5E-05 1.2E-09 69.3 4.0 113 137-272 48-166 (211)
171 3iru_A Phoshonoacetaldehyde hy 97.6 3.7E-05 1.3E-09 69.5 3.9 96 162-272 111-212 (277)
172 3nas_A Beta-PGM, beta-phosphog 97.6 1.8E-05 6.2E-10 69.9 1.8 92 163-272 93-189 (233)
173 2fi1_A Hydrolase, haloacid deh 97.6 1.6E-05 5.6E-10 67.9 1.2 91 163-272 83-178 (190)
174 3k1z_A Haloacid dehalogenase-l 97.6 5.9E-05 2E-09 68.8 4.9 97 161-274 105-207 (263)
175 3umc_A Haloacid dehalogenase; 97.5 2.8E-05 9.7E-10 69.5 2.7 94 162-273 120-217 (254)
176 3nvb_A Uncharacterized protein 97.5 2.8E-05 9.4E-10 76.4 2.2 121 135-273 219-357 (387)
177 3smv_A S-(-)-azetidine-2-carbo 97.5 3E-05 1E-09 68.2 1.8 94 162-272 99-199 (240)
178 1rku_A Homoserine kinase; phos 97.5 7.3E-05 2.5E-09 65.1 4.3 102 161-270 68-169 (206)
179 3umg_A Haloacid dehalogenase; 97.5 3.2E-05 1.1E-09 68.8 1.8 94 162-273 116-213 (254)
180 2pke_A Haloacid delahogenase-l 97.4 0.00014 4.7E-09 65.4 5.6 94 162-272 112-206 (251)
181 1q92_A 5(3)-deoxyribonucleotid 97.4 1.5E-05 5.3E-10 69.9 -0.9 42 161-202 74-117 (197)
182 2r8e_A 3-deoxy-D-manno-octulos 97.4 0.00017 6E-09 62.9 5.6 113 137-272 25-143 (188)
183 2b0c_A Putative phosphatase; a 97.4 6.7E-06 2.3E-10 71.3 -3.7 97 161-273 90-192 (206)
184 2go7_A Hydrolase, haloacid deh 97.4 6.9E-05 2.4E-09 64.0 2.7 95 161-272 84-183 (207)
185 4ap9_A Phosphoserine phosphata 97.3 5.3E-05 1.8E-09 64.9 1.3 95 161-269 78-173 (201)
186 2wf7_A Beta-PGM, beta-phosphog 97.3 6.9E-05 2.4E-09 65.2 1.8 93 162-272 91-188 (221)
187 2qlt_A (DL)-glycerol-3-phospha 97.3 0.00015 5.3E-09 66.5 4.0 96 161-273 113-221 (275)
188 3skx_A Copper-exporting P-type 97.2 0.00043 1.5E-08 62.8 6.5 85 162-270 144-229 (280)
189 2g80_A Protein UTR4; YEL038W, 97.2 9.4E-05 3.2E-09 68.2 1.9 90 163-272 126-230 (253)
190 2i33_A Acid phosphatase; HAD s 97.2 0.00041 1.4E-08 64.3 6.0 68 134-201 55-144 (258)
191 2i7d_A 5'(3')-deoxyribonucleot 97.2 0.00014 4.6E-09 63.4 2.4 40 161-200 72-113 (193)
192 2jxx_A Nfatc2-interacting prot 97.2 0.0014 4.8E-08 51.8 8.0 71 4-77 25-97 (97)
193 3vay_A HAD-superfamily hydrola 97.1 6.4E-05 2.2E-09 66.1 -0.7 90 162-272 105-199 (230)
194 2bps_A YUKD protein; ubiquitin 97.1 0.00088 3E-08 51.1 5.7 69 4-75 4-80 (81)
195 2fdr_A Conserved hypothetical 97.1 0.00015 5.3E-09 63.4 1.6 96 162-273 87-187 (229)
196 2obb_A Hypothetical protein; s 97.0 0.0012 4.1E-08 55.8 6.9 59 137-198 2-61 (142)
197 3v7o_A Minor nucleoprotein VP3 96.9 0.00013 4.5E-09 65.2 0.0 69 5-76 22-90 (227)
198 2l76_A Nfatc2-interacting prot 96.8 0.0042 1.4E-07 48.6 7.4 72 4-78 21-92 (95)
199 1l7m_A Phosphoserine phosphata 96.8 0.0009 3.1E-08 57.5 4.1 101 162-269 76-182 (211)
200 3n28_A Phosphoserine phosphata 96.8 0.00067 2.3E-08 64.4 3.4 104 161-270 177-285 (335)
201 3goe_A DNA repair protein RAD6 96.7 0.01 3.5E-07 44.6 8.4 69 5-76 10-80 (82)
202 1swv_A Phosphonoacetaldehyde h 96.6 0.0021 7.3E-08 57.8 5.7 98 163-272 104-204 (267)
203 3ocu_A Lipoprotein E; hydrolas 96.6 0.002 6.9E-08 59.9 5.3 69 134-202 54-146 (262)
204 3i28_A Epoxide hydrolase 2; ar 96.6 0.00059 2E-08 67.2 1.7 95 162-273 100-204 (555)
205 2b82_A APHA, class B acid phos 96.5 0.0006 2.1E-08 60.9 1.4 122 137-273 36-185 (211)
206 3uf8_A Ubiquitin-like protein 96.5 0.006 2.1E-07 54.7 7.7 74 4-80 21-94 (209)
207 1xpj_A Hypothetical protein; s 96.5 0.0033 1.1E-07 51.4 5.5 51 139-190 2-53 (126)
208 3pct_A Class C acid phosphatas 96.5 0.0015 5.3E-08 60.6 3.8 66 137-202 57-146 (260)
209 4dw8_A Haloacid dehalogenase-l 96.5 0.0057 1.9E-07 55.8 7.4 58 137-201 4-62 (279)
210 3mpo_A Predicted hydrolase of 96.4 0.0055 1.9E-07 55.8 7.0 59 137-202 4-63 (279)
211 2kc2_A Talin-1, F1; FERM, adhe 96.3 0.0044 1.5E-07 51.3 5.3 69 6-75 13-119 (128)
212 1l6r_A Hypothetical protein TA 96.3 0.0042 1.4E-07 55.8 5.7 57 138-201 5-62 (227)
213 3ix6_A TS, tsase, thymidylate 96.3 0.00061 2.1E-08 65.9 0.0 69 5-76 22-90 (360)
214 3epr_A Hydrolase, haloacid deh 96.3 0.0061 2.1E-07 55.4 6.6 59 137-203 4-66 (264)
215 3gyg_A NTD biosynthesis operon 96.3 0.0092 3.1E-07 54.9 7.8 70 132-206 16-90 (289)
216 1wr8_A Phosphoglycolate phosph 96.2 0.0066 2.3E-07 54.2 6.4 57 138-201 3-60 (231)
217 3pgv_A Haloacid dehalogenase-l 96.2 0.0062 2.1E-07 56.1 6.1 59 136-201 19-78 (285)
218 3qgm_A P-nitrophenyl phosphata 96.2 0.0092 3.2E-07 54.0 7.1 59 137-203 7-69 (268)
219 1rkq_A Hypothetical protein YI 96.1 0.0072 2.4E-07 55.8 6.3 58 138-202 5-63 (282)
220 2al3_A TUG long isoform; TUG U 96.0 0.013 4.5E-07 45.4 6.1 74 5-81 10-84 (90)
221 3dnp_A Stress response protein 95.9 0.0097 3.3E-07 54.5 6.1 58 137-201 5-63 (290)
222 1xvi_A MPGP, YEDP, putative ma 95.9 0.011 3.8E-07 54.4 6.4 58 137-201 8-66 (275)
223 2pq0_A Hypothetical conserved 95.9 0.0091 3.1E-07 53.9 5.7 56 138-200 3-59 (258)
224 1nrw_A Hypothetical protein, h 95.8 0.012 4.1E-07 54.3 5.9 56 138-200 4-60 (288)
225 3qx1_A FAS-associated factor 1 95.7 0.053 1.8E-06 41.1 8.5 70 4-75 7-80 (84)
226 4da1_A Protein phosphatase 1K, 95.7 0.0018 6.1E-08 63.4 0.0 70 4-76 30-99 (389)
227 3dao_A Putative phosphatse; st 95.7 0.01 3.4E-07 54.7 5.0 61 134-200 17-78 (283)
228 2b30_A Pvivax hypothetical pro 95.7 0.014 4.7E-07 54.6 6.0 57 138-201 27-88 (301)
229 1vjr_A 4-nitrophenylphosphatas 95.6 0.023 8E-07 51.3 7.2 58 137-202 16-77 (271)
230 2gfh_A Haloacid dehalogenase-l 95.5 0.0071 2.4E-07 55.0 3.4 91 162-267 121-215 (260)
231 2zos_A MPGP, mannosyl-3-phosph 95.5 0.016 5.6E-07 52.4 5.8 54 139-201 3-57 (249)
232 3fzq_A Putative hydrolase; YP_ 95.4 0.0089 3E-07 54.0 3.7 56 138-200 5-61 (274)
233 3ewi_A N-acylneuraminate cytid 95.4 0.0096 3.3E-07 51.3 3.6 111 136-272 7-125 (168)
234 1nf2_A Phosphatase; structural 95.3 0.027 9.3E-07 51.3 6.7 56 138-201 2-58 (268)
235 1ltq_A Polynucleotide kinase; 95.3 0.016 5.4E-07 53.7 4.9 138 116-272 133-296 (301)
236 3pdw_A Uncharacterized hydrola 95.3 0.016 5.4E-07 52.4 4.8 58 137-202 5-66 (266)
237 1s2o_A SPP, sucrose-phosphatas 95.2 0.017 5.7E-07 52.2 4.8 55 139-201 4-58 (244)
238 2hx1_A Predicted sugar phospha 95.2 0.044 1.5E-06 50.1 7.6 57 137-201 13-73 (284)
239 2ho4_A Haloacid dehalogenase-l 95.2 0.048 1.6E-06 48.4 7.6 57 137-201 6-66 (259)
240 2hi0_A Putative phosphoglycola 95.0 0.018 6E-07 51.2 4.3 95 161-272 109-208 (240)
241 2x4d_A HLHPP, phospholysine ph 95.0 0.062 2.1E-06 47.7 7.8 60 138-201 12-75 (271)
242 2oyc_A PLP phosphatase, pyrido 94.8 0.064 2.2E-06 49.7 7.7 56 138-201 21-80 (306)
243 1zjj_A Hypothetical protein PH 94.8 0.028 9.6E-07 50.9 5.1 55 139-201 2-60 (263)
244 3kc2_A Uncharacterized protein 94.6 0.064 2.2E-06 51.7 7.3 59 137-203 12-75 (352)
245 3f9r_A Phosphomannomutase; try 94.5 0.049 1.7E-06 49.4 5.8 53 137-199 3-56 (246)
246 2rbk_A Putative uncharacterize 94.3 0.014 4.8E-07 52.9 1.8 54 139-199 3-57 (261)
247 2amy_A PMM 2, phosphomannomuta 94.3 0.066 2.2E-06 48.0 6.3 54 136-199 4-57 (246)
248 2fue_A PMM 1, PMMH-22, phospho 94.3 0.059 2E-06 49.0 5.9 50 137-193 12-61 (262)
249 3l7y_A Putative uncharacterize 94.2 0.025 8.4E-07 52.5 3.3 56 137-199 36-93 (304)
250 1rlm_A Phosphatase; HAD family 94.0 0.033 1.1E-06 50.8 3.7 55 138-199 3-59 (271)
251 1u02_A Trehalose-6-phosphate p 94.0 0.037 1.3E-06 49.7 3.9 56 139-197 2-58 (239)
252 1ryj_A Unknown; beta/alpha pro 93.9 0.38 1.3E-05 35.0 8.6 64 1-76 1-64 (70)
253 1yv9_A Hydrolase, haloacid deh 93.8 0.074 2.5E-06 47.7 5.7 58 137-202 4-66 (264)
254 2c4n_A Protein NAGD; nucleotid 93.7 0.17 5.7E-06 43.9 7.6 55 138-200 3-61 (250)
255 1qyi_A ZR25, hypothetical prot 93.5 0.018 6E-07 56.4 1.0 107 161-272 214-341 (384)
256 1yns_A E-1 enzyme; hydrolase f 93.4 0.045 1.6E-06 49.8 3.4 95 161-272 129-230 (261)
257 2om6_A Probable phosphoserine 93.4 0.048 1.6E-06 47.1 3.4 95 163-273 100-203 (235)
258 3r4c_A Hydrolase, haloacid deh 93.3 0.096 3.3E-06 47.1 5.4 48 137-190 11-59 (268)
259 2dzk_A UBX domain-containing p 93.1 0.5 1.7E-05 37.6 8.9 73 4-77 13-89 (109)
260 3a1c_A Probable copper-exporti 92.5 0.22 7.5E-06 45.8 6.8 105 137-269 142-247 (287)
261 2daj_A KIAA0977 protein, COBL- 92.3 0.37 1.3E-05 36.7 6.5 74 4-80 10-84 (91)
262 3zx4_A MPGP, mannosyl-3-phosph 91.9 0.15 5.2E-06 45.9 4.8 49 140-200 2-51 (259)
263 1wj4_A KIAA0794 protein; UBX d 91.6 0.5 1.7E-05 38.6 7.1 71 4-76 43-117 (124)
264 1oey_A P67-PHOX, neutrophil cy 90.0 0.66 2.2E-05 35.2 5.9 43 4-47 5-47 (83)
265 1ip9_A BEM1 protein; ubiquitin 89.1 0.72 2.5E-05 35.1 5.5 69 4-77 12-84 (85)
266 2cr5_A Reproduction 8; UBX dom 88.1 2.2 7.5E-05 33.7 8.1 71 4-76 23-96 (109)
267 4a3p_A Ubiquitin carboxyl-term 86.2 3.1 0.0001 37.0 8.9 70 5-75 128-205 (217)
268 3jyu_A Ubiquitin carboxyl-term 85.7 3.3 0.00011 37.2 8.9 70 5-75 140-217 (231)
269 2kvr_A Ubiquitin carboxyl-term 85.0 0.81 2.8E-05 37.6 4.1 31 17-47 59-89 (130)
270 2l32_A Small archaeal modifier 84.2 2.7 9.4E-05 30.9 6.3 59 6-77 2-61 (74)
271 3ivf_A Talin-1; FERM domain, c 83.9 3.3 0.00011 39.6 8.6 72 4-75 3-81 (371)
272 4eut_A Serine/threonine-protei 83.8 2.8 9.6E-05 39.9 8.1 68 11-81 319-389 (396)
273 2hi0_A Putative phosphoglycola 83.8 0.34 1.2E-05 42.6 1.4 17 138-154 4-20 (240)
274 4fe3_A Cytosolic 5'-nucleotida 83.5 5.1 0.00018 36.5 9.4 44 159-202 138-182 (297)
275 2om6_A Probable phosphoserine 82.2 0.35 1.2E-05 41.5 0.8 16 138-153 4-19 (235)
276 4as2_A Phosphorylcholine phosp 81.0 2.1 7.3E-05 40.5 5.9 37 162-198 143-180 (327)
277 1tyg_B YJBS; alpha beta barrel 81.0 2.2 7.4E-05 32.6 4.8 61 6-76 20-81 (87)
278 2yj3_A Copper-transporting ATP 81.9 0.32 1.1E-05 44.3 0.0 88 160-270 134-222 (263)
279 2gfh_A Haloacid dehalogenase-l 80.3 0.54 1.8E-05 42.3 1.4 18 137-154 17-34 (260)
280 1s3s_G P47 protein; AAA ATPase 79.9 2.9 0.0001 34.0 5.6 68 5-73 53-123 (127)
281 3qa8_A MGC80376 protein; kinas 78.0 2.4 8.3E-05 44.2 5.6 87 12-101 320-415 (676)
282 1vd2_A Protein kinase C, IOTA 77.9 5.5 0.00019 30.5 6.2 40 4-43 6-45 (89)
283 1wgk_A Riken cDNA 2900073H19 p 76.9 2.9 9.9E-05 33.4 4.6 72 1-77 8-103 (114)
284 1y8a_A Hypothetical protein AF 76.8 0.79 2.7E-05 42.9 1.4 39 162-200 103-141 (332)
285 2cu3_A Unknown function protei 76.3 3.8 0.00013 28.9 4.6 57 9-76 2-58 (64)
286 2k9x_A Tburm1, uncharacterized 76.0 0.82 2.8E-05 36.5 1.1 45 1-47 1-56 (110)
287 1vjk_A Molybdopterin convertin 75.7 20 0.0007 27.2 9.2 65 4-76 9-92 (98)
288 2k5p_A THis protein, thiamine- 73.1 2.7 9.1E-05 31.3 3.2 61 8-76 2-63 (78)
289 2kl0_A Putative thiamin biosyn 72.7 3.7 0.00013 30.0 3.9 57 9-76 3-59 (73)
290 1yns_A E-1 enzyme; hydrolase f 72.1 1 3.5E-05 40.6 0.8 17 137-153 9-25 (261)
291 1f0z_A THis protein; ubiquitin 68.1 3.7 0.00013 29.1 3.0 58 9-76 3-60 (66)
292 3a1c_A Probable copper-exporti 66.8 2.1 7.2E-05 39.0 1.8 17 138-154 32-48 (287)
293 1q1o_A Cell division control p 61.0 9.2 0.00032 29.8 4.2 37 4-40 5-49 (98)
294 1wj6_A KIAA0049 protein, RSGI 59.2 42 0.0014 26.1 7.6 47 1-47 11-59 (101)
295 2bkf_A Zinc-finger protein NBR 59.0 35 0.0012 25.9 6.9 42 1-42 3-46 (87)
296 2ylm_A Ubiquitin carboxyl-term 58.7 7 0.00024 39.5 4.0 31 17-47 39-69 (530)
297 2jrh_A Mitogen-activated prote 57.4 31 0.0011 26.3 6.3 40 1-40 1-40 (94)
298 4e71_A Plexin-B2, MM1; transme 57.0 27 0.00093 27.7 6.3 73 4-76 11-108 (111)
299 2qjl_A URM1, ubiquitin-related 56.5 57 0.002 24.6 8.2 24 14-37 20-45 (99)
300 3po0_A Small archaeal modifier 54.1 35 0.0012 25.1 6.4 55 14-76 18-83 (89)
301 2hj1_A Hypothetical protein; s 53.2 41 0.0014 25.9 6.8 66 4-77 12-84 (97)
302 4gxt_A A conserved functionall 51.1 8.2 0.00028 37.2 2.9 41 160-200 219-260 (385)
303 2c7h_A RBBP6, retinoblastoma-b 47.9 14 0.0005 27.9 3.2 36 5-40 9-45 (86)
304 3onh_A Ubiquitin-activating en 47.2 38 0.0013 27.5 5.8 55 23-81 19-82 (127)
305 4gxt_A A conserved functionall 47.0 13 0.00044 35.8 3.6 37 115-151 17-53 (385)
306 3r8s_T 50S ribosomal protein L 46.5 31 0.0011 26.4 5.0 41 13-55 27-67 (93)
307 1n62_A Carbon monoxide dehydro 46.4 19 0.00066 30.6 4.2 31 1-32 1-31 (166)
308 1wgy_A RAP guanine nucleotide 45.9 58 0.002 25.5 6.5 73 5-77 10-85 (104)
309 1ffv_A CUTS, iron-sulfur prote 44.5 21 0.00073 30.2 4.2 31 1-32 1-31 (163)
310 2cu1_A Mitogen-activated prote 42.2 62 0.0021 25.1 6.0 37 4-40 8-44 (103)
311 1f2r_I Inhibitor of caspase-ac 41.9 72 0.0025 24.8 6.4 61 15-81 31-93 (100)
312 1rm6_C 4-hydroxybenzoyl-COA re 41.8 26 0.0009 29.4 4.3 30 4-33 2-31 (161)
313 3hrd_D Nicotinate dehydrogenas 41.5 23 0.00077 30.0 3.8 29 1-30 1-29 (160)
314 1vq8_S 50S ribosomal protein L 41.0 29 0.001 26.1 4.0 35 13-47 22-56 (85)
315 2eel_A Cell death activator CI 40.2 66 0.0022 24.5 5.9 62 14-81 21-82 (91)
316 2q5w_D Molybdopterin convertin 40.1 24 0.00082 25.2 3.4 54 14-76 16-71 (77)
317 1t3q_A Quinoline 2-oxidoreduct 39.5 29 0.001 29.2 4.3 28 5-32 10-37 (168)
318 2zjr_Q 50S ribosomal protein L 38.6 42 0.0014 25.8 4.6 38 15-54 24-61 (95)
319 3tve_T 50S ribosomal protein L 38.6 42 0.0014 25.6 4.6 39 14-54 22-60 (92)
320 1fm0_D Molybdopterin convertin 37.3 40 0.0014 24.1 4.3 54 14-76 17-75 (81)
321 2r2o_A Plexin-B1; effector dom 35.8 1.5E+02 0.0053 24.2 7.9 72 5-76 25-126 (138)
322 2g1e_A Hypothetical protein TA 35.6 1.1E+02 0.0037 22.2 6.6 55 18-76 19-84 (90)
323 1jq4_A Methane monooxygenase c 33.7 63 0.0022 24.1 5.0 30 1-30 1-31 (98)
324 3j21_T 50S ribosomal protein L 32.2 48 0.0017 24.9 4.0 35 13-47 23-57 (86)
325 1ef1_A Moesin; membrane, FERM 31.0 86 0.003 28.2 6.4 44 5-50 2-45 (294)
326 1rws_A Hypothetical protein PF 30.7 12 0.0004 27.3 0.3 48 17-76 24-71 (77)
327 2v1y_A Phosphatidylinositol-4, 28.4 1.1E+02 0.0036 24.1 5.5 35 3-37 18-53 (108)
328 3rpf_C Molybdopterin convertin 27.9 1E+02 0.0034 21.8 5.0 52 17-76 15-68 (74)
329 2ylm_A Ubiquitin carboxyl-term 27.0 1.1E+02 0.0038 30.6 6.8 59 6-65 339-408 (530)
330 2l52_A Methanosarcina acetivor 25.7 91 0.0031 23.5 4.7 30 5-37 4-41 (99)
331 2npt_B Mitogen-activated prote 24.1 2E+02 0.0068 22.1 6.1 37 4-40 20-56 (100)
332 1y8x_B Ubiquitin-activating en 23.7 26 0.00088 27.1 1.1 59 15-76 6-82 (98)
333 1iue_A Ferredoxin; electron tr 23.5 1.1E+02 0.0037 22.8 4.7 26 4-29 2-27 (98)
334 3kuz_A Plexin-C1; structural g 22.0 3.1E+02 0.011 22.0 9.0 72 4-76 19-124 (126)
335 2i1j_A Moesin; FERM, coiled-co 21.5 1.1E+02 0.0039 30.9 5.7 48 1-50 1-48 (575)
336 3ge3_C Toluene-4-monooxygenase 21.5 2.6E+02 0.0088 20.9 7.1 74 1-76 1-81 (84)
337 1h4r_A Merlin; FERM, neurofibr 21.5 1.3E+02 0.0044 27.4 5.7 65 4-70 22-90 (314)
338 1ibx_B Chimera of IGG binding 21.2 1.3E+02 0.0046 24.8 5.0 55 24-81 82-138 (145)
339 3j08_A COPA, copper-exporting 20.8 1.7E+02 0.0057 29.9 6.9 62 136-201 435-497 (645)
340 2c60_A Human mitogen-activated 20.7 2.8E+02 0.0094 21.6 6.3 37 4-40 31-67 (111)
341 1a70_A Ferredoxin; iron-sulfur 20.2 1.4E+02 0.0048 22.1 4.7 26 4-29 2-27 (97)
342 2jc9_A Cytosolic purine 5'-nuc 20.0 99 0.0034 31.3 4.8 41 159-200 243-285 (555)
No 1
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=100.00 E-value=2.7e-78 Score=584.36 Aligned_cols=313 Identities=59% Similarity=1.019 Sum_probs=279.0
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcchh
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQSI 83 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~~i 83 (360)
+|+|+|||+|++|+|+|++++||++||++|+++|||||++|||||++++|++++|+.+|+++||++|++||||||+++++
T Consensus 5 ~i~i~Vk~~g~~~~v~v~~~~Tv~~lK~~I~~~tgVpp~~QkLi~~k~~Gk~l~D~~~L~~~~ik~g~~l~L~gs~~~~i 84 (320)
T 3shq_A 5 EVVVIVKWSGKEYPVDLTDQDTVEVLRHEIFRKTQVRPERQKLLNLKYKGKTAADNVKISALELKPNFKLMMVGSTEADI 84 (320)
T ss_dssp EEEEEEEETTEEEEEEEETTSBHHHHHHHHHHHHCCCGGGCEETTCBSSSSBCCTTSBTTSSCCC--CEEEEECCCC---
T ss_pred eEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEeecccCCcccCccccHHHcCCCCCCEEEEEccchhhh
Confidence 69999999999999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred hhccCCCCCccccccccch-hhhhhhhhhhhhhHHHhhHHhhhhccccCCCCCCCCceEEeecccceeecCCCcccceee
Q psy11202 84 QEASTKPLDIPEIVDDFDI-EEDQVAIENKDIYLAKIDKRIQDYQIDILNEPRPGKKLLVLDIDYTLFDHRSAAEQGYEL 162 (360)
Q Consensus 84 ~~~~~~~~~~~~~~~d~~~-~~~~~~l~n~~~~l~kl~~ri~~y~i~i~~~~~~~kk~LVLDLD~TLv~~~~~~~~~~~~ 162 (360)
.+++.+|.+.++|+|||+. .++.+.++|++.|++++++|+++|.+++++||+++|+||||||||||+|+.+.+++++++
T Consensus 85 ~~~~~~p~~~~~~~eD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~k~tLVLDLDeTLvh~~~~~~~~~~~ 164 (320)
T 3shq_A 85 EDACSLPDNIGEVVDDFDDADEREESVAHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYTLFDHRSPAETGTEL 164 (320)
T ss_dssp -------CCCSCCCCTTCCCCC--CCSTTSHHHHHHHHHHHHHCCCCCSSCCCTTCEEEEECCBTTTBCSSSCCSSHHHH
T ss_pred cccccCCCcCCcccccCCCcccchhhhhhhhhhHHHHHHHHHhcCCCcCCCCcCCCcEEEEeccccEEcccccCCCcceE
Confidence 7667889999999999987 455689999999999999999999999999999999999999999999998877788999
Q ss_pred cCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCCC
Q psy11202 163 MRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPS 242 (360)
Q Consensus 163 ~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~ 242 (360)
+|||+++||++|+++|+|+||||+++.||+++++.|++..++.+++.+++++.+|++.++.++|..++|||+.||+++|+
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~ 244 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQ 244 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCC
Confidence 99999999999999999999999999999999999998877667777778877677766666777799999999999998
Q ss_pred CCCCCcEEEEeCCchhhccCCCCeeEecccccCcCCCCCchHHHHHHHHHHhcc-CCCCCchhchhhhhhhhhhhH
Q psy11202 243 LYNPTNTIMFDDIRRNFLMNPRNGLRIRPFREAHLNRGSDRELKRLGRYLDEIA-TVEDLTALNHRNWEKYLHAKH 317 (360)
Q Consensus 243 ~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~~~~~~~~~D~~L~~L~~~L~~la-~~~DVr~~~~~~w~~~~~~~~ 317 (360)
++++|||||||+|.+|.+||+|||+|++|++++.++.+|++|..|++||+.|+ .++|||+++|++|++|.+++.
T Consensus 245 -rdl~~tIiIDdsp~~~~~~p~NgI~I~~~~~~~~~~~~D~eL~~L~~~L~~L~~~~~DVr~~~~~~w~~~~~~~~ 319 (320)
T 3shq_A 245 -YNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLNHRKWEHYHPKKN 319 (320)
T ss_dssp -CCGGGEEEEESCGGGGTTSGGGEEECCCCCCHHHHTTTCCHHHHHHHHHHHHHHHCSCGGGCCGGGGGGCCC---
T ss_pred -CChhHEEEEeCChHHhccCcCceEEeCeEcCCCCCCCccHHHHHHHHHHHHHhccCcchhHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999886555678999999999999999 999999999999999999764
No 2
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=2e-37 Score=281.12 Aligned_cols=161 Identities=17% Similarity=0.245 Sum_probs=134.9
Q ss_pred cccCCCCCCCCceEEeecccceeecCCCcc-cceeecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCc
Q psy11202 128 IDILNEPRPGKKLLVLDIDYTLFDHRSAAE-QGYELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNY 206 (360)
Q Consensus 128 i~i~~~~~~~kk~LVLDLD~TLv~~~~~~~-~~~~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~ 206 (360)
++..+++..+++||||||||||||+.+... .+++.+|||+++||++|+++|+|+||||+++.||+++++.|++.. .
T Consensus 24 p~~~~~~~~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~---~ 100 (204)
T 3qle_A 24 PPPPPPPYQRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIH---A 100 (204)
T ss_dssp CCCC----CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTC---S
T ss_pred CCCCccccCCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCC---C
Confidence 344444455789999999999999976543 457999999999999999999999999999999999999996532 2
Q ss_pred eEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccccCcCCCCCchHHH
Q psy11202 207 KIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFREAHLNRGSDRELK 286 (360)
Q Consensus 207 ~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~~~~~~~~~D~~L~ 286 (360)
.+.+.|.|++|... .+.++|||+.+++++ ++||||||++.+|.+||+|||+|.+|.+ + .|++|.
T Consensus 101 ~f~~rl~R~~c~~~-----~g~y~KdL~~Lgrdl------~~vIiIDDsp~~~~~~p~N~I~I~~~~~----~-~D~eL~ 164 (204)
T 3qle_A 101 FVSYNLFKEHCVYK-----DGVHIKDLSKLNRDL------SKVIIIDTDPNSYKLQPENAIPMEPWNG----E-ADDKLV 164 (204)
T ss_dssp SEEEEECGGGSEEE-----TTEEECCGGGSCSCG------GGEEEEESCTTTTTTCGGGEEECCCCCS----S-CCCHHH
T ss_pred eEEEEEEecceeEE-----CCeeeecHHHhCCCh------HHEEEEECCHHHHhhCccCceEeeeECC----C-CChhHH
Confidence 46677888888642 346899999997654 8999999999999999999999999975 2 466999
Q ss_pred HHHHHHHhcc--CCCCCchhchh
Q psy11202 287 RLGRYLDEIA--TVEDLTALNHR 307 (360)
Q Consensus 287 ~L~~~L~~la--~~~DVr~~~~~ 307 (360)
+|++||+.|+ .++|||++.++
T Consensus 165 ~L~~~L~~L~~~~~~DVR~~L~~ 187 (204)
T 3qle_A 165 RLIPFLEYLATQQTKDVRPILNS 187 (204)
T ss_dssp HHHHHHHHHHHTCCSCSHHHHTT
T ss_pred HHHHHHHHHhhcChHHHHHHHHH
Confidence 9999999998 69999999876
No 3
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=100.00 E-value=3.2e-33 Score=249.22 Aligned_cols=155 Identities=19% Similarity=0.277 Sum_probs=133.3
Q ss_pred CCCCCCceEEeecccceeecCCCcc----------------cceeecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHH
Q psy11202 133 EPRPGKKLLVLDIDYTLFDHRSAAE----------------QGYELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMK 196 (360)
Q Consensus 133 ~~~~~kk~LVLDLD~TLv~~~~~~~----------------~~~~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~ 196 (360)
|+..+|++|||||||||+|+.+... .+++.+|||+++||++++++|+++||||+++.||+++++
T Consensus 10 ~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 10 AQDSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GGGTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHH
T ss_pred cccCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHH
Confidence 3446999999999999999865321 246889999999999999999999999999999999999
Q ss_pred HhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccccCc
Q psy11202 197 LLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFREAH 276 (360)
Q Consensus 197 ~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~~~~ 276 (360)
.|++.. .+.+++.++.|... +..++|+|+.+++ ++++||+|||++..+.+||.|||+|.+|.+
T Consensus 90 ~ld~~~----~f~~~~~rd~~~~~-----k~~~~k~L~~Lg~------~~~~~vivdDs~~~~~~~~~ngi~i~~~~~-- 152 (181)
T 2ght_A 90 LLDKWG----AFRARLFRESCVFH-----RGNYVKDLSRLGR------DLRRVLILDNSPASYVFHPDNAVPVASWFD-- 152 (181)
T ss_dssp HHCTTC----CEEEEECGGGSEEE-----TTEEECCGGGTCS------CGGGEEEECSCGGGGTTCTTSBCCCCCCSS--
T ss_pred HHCCCC----cEEEEEeccCceec-----CCcEeccHHHhCC------CcceEEEEeCCHHHhccCcCCEeEeccccC--
Confidence 997653 35667778777532 2468999999974 459999999999999999999999999986
Q ss_pred CCCCCchHHHHHHHHHHhccCCCCCchhch
Q psy11202 277 LNRGSDRELKRLGRYLDEIATVEDLTALNH 306 (360)
Q Consensus 277 ~~~~~D~~L~~L~~~L~~la~~~DVr~~~~ 306 (360)
+.+|++|..|++||+.|+.++|||++.+
T Consensus 153 --~~~D~eL~~l~~~L~~l~~~~DVr~~l~ 180 (181)
T 2ght_A 153 --NMSDTELHDLLPFFEQLSRVDDVYSVLR 180 (181)
T ss_dssp --CTTCCHHHHHHHHHHHHTTCSCTHHHHC
T ss_pred --CCChHHHHHHHHHHHHhCcCccHHHHhh
Confidence 5789999999999999999999999764
No 4
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=233.72 Aligned_cols=153 Identities=22% Similarity=0.293 Sum_probs=127.5
Q ss_pred cCCCCC---CCCceEEeecccceeecCCCcc----------------cceeecCccHHHHHHHHhcCCeEEEEcCCcHHH
Q psy11202 130 ILNEPR---PGKKLLVLDIDYTLFDHRSAAE----------------QGYELMRPYLHEFLTSAYKNYDIAIWSATGMKW 190 (360)
Q Consensus 130 i~~~~~---~~kk~LVLDLD~TLv~~~~~~~----------------~~~~~~RP~l~eFL~~l~~~yeivIwTas~~~y 190 (360)
.+||+. .+|++|||||||||||+.+... .+++.+|||+++||+++++.|+++||||+++.|
T Consensus 17 llp~~~~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Tss~~~~ 96 (195)
T 2hhl_A 17 LLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKY 96 (195)
T ss_dssp SSCCCCGGGTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHH
T ss_pred CCCCCCcccCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcCCCHHH
Confidence 555554 5899999999999999865321 246889999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 191 IEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 191 a~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
|+++++.|++.. .+.+++.++.|... +..++|+|+.+|++ +++||+|||++..+.++|.|||+|.
T Consensus 97 a~~vl~~ld~~~----~f~~~l~rd~~~~~-----k~~~lK~L~~Lg~~------~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 97 ADPVADLLDRWG----VFRARLFRESCVFH-----RGNYVKDLSRLGRE------LSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp HHHHHHHHCCSS----CEEEEECGGGCEEE-----TTEEECCGGGSSSC------GGGEEEEESCGGGGTTCGGGEEECC
T ss_pred HHHHHHHhCCcc----cEEEEEEcccceec-----CCceeeeHhHhCCC------hhHEEEEECCHHHhhhCccCccEEe
Confidence 999999997753 35567778777532 24689999999754 4899999999999999999999999
Q ss_pred ccccCcCCCCCchHHHHHHHHHHhccCCCCC
Q psy11202 271 PFREAHLNRGSDRELKRLGRYLDEIATVEDL 301 (360)
Q Consensus 271 ~f~~~~~~~~~D~~L~~L~~~L~~la~~~DV 301 (360)
+|.+ +.+|++|..|++||+.|+.++|-
T Consensus 162 ~~~~----~~~D~eL~~L~~~L~~l~~~~~~ 188 (195)
T 2hhl_A 162 SWFD----DMTDTELLDLIPFFEGLSREDDE 188 (195)
T ss_dssp CCSS----CTTCCHHHHHHHHHHHHHC----
T ss_pred eecC----CCChHHHHHHHHHHHHHHhCcCc
Confidence 9976 57899999999999999988764
No 5
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=99.92 E-value=5.2e-25 Score=216.24 Aligned_cols=123 Identities=20% Similarity=0.309 Sum_probs=100.6
Q ss_pred CCCceEEeecccceeecCCC---------------------------------cccceeecCccHHHHHHHHhcCCeEEE
Q psy11202 136 PGKKLLVLDIDYTLFDHRSA---------------------------------AEQGYELMRPYLHEFLTSAYKNYDIAI 182 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~---------------------------------~~~~~~~~RP~l~eFL~~l~~~yeivI 182 (360)
.+|++|||||||||||+... .+.+++.+|||+++||++++++|+|+|
T Consensus 16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~~yeivI 95 (372)
T 3ef0_A 16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI 95 (372)
T ss_dssp HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHTTEEEEE
T ss_pred CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhcCcEEEE
Confidence 38999999999999998310 123578999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCC-CCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhcc
Q psy11202 183 WSATGMKWIEEKMKLLGVTV-NPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLM 261 (360)
Q Consensus 183 wTas~~~ya~~il~~L~~~~-~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~ 261 (360)
|||++..||+++++.|++.. .+.+++ +.|+.| |..++|||+.||. .++++||||||++.+|.+
T Consensus 96 ~Tas~~~yA~~vl~~LDp~~~~f~~ri---~sr~~~--------g~~~~KdL~~L~~-----~dl~~viiiDd~~~~~~~ 159 (372)
T 3ef0_A 96 YTMGTKAYAKEVAKIIDPTGKLFQDRV---LSRDDS--------GSLAQKSLRRLFP-----CDTSMVVVIDDRGDVWDW 159 (372)
T ss_dssp ECSSCHHHHHHHHHHHCTTSCSSSSCE---ECTTTS--------SCSSCCCGGGTCS-----SCCTTEEEEESCSGGGTT
T ss_pred EeCCcHHHHHHHHHHhccCCceeeeEE---EEecCC--------CCcceecHHHhcC-----CCCceEEEEeCCHHHcCC
Confidence 99999999999999997754 233332 234432 4458999999853 355899999999999999
Q ss_pred CCCCeeEecccccC
Q psy11202 262 NPRNGLRIRPFREA 275 (360)
Q Consensus 262 ~p~Ngi~I~~f~~~ 275 (360)
|| |||+|.||.+.
T Consensus 160 ~p-N~I~i~~~~~f 172 (372)
T 3ef0_A 160 NP-NLIKVVPYEFF 172 (372)
T ss_dssp CT-TEEECCCCCCS
T ss_pred CC-cEeeeCCcccc
Confidence 98 99999999764
No 6
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.1e-24 Score=216.78 Aligned_cols=137 Identities=18% Similarity=0.255 Sum_probs=104.8
Q ss_pred CCCceEEeecccceeecCCC---------------------------------cccceeecCccHHHHHHHHhcCCeEEE
Q psy11202 136 PGKKLLVLDIDYTLFDHRSA---------------------------------AEQGYELMRPYLHEFLTSAYKNYDIAI 182 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~---------------------------------~~~~~~~~RP~l~eFL~~l~~~yeivI 182 (360)
.+|++||||||+||||+... ...+++.+|||+++||++|+++|+|+|
T Consensus 24 ~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~~yEivI 103 (442)
T 3ef1_A 24 EKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI 103 (442)
T ss_dssp TTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTTTEEEEE
T ss_pred cCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhCCcEEEE
Confidence 48999999999999998421 013679999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCC-CCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhcc
Q psy11202 183 WSATGMKWIEEKMKLLGVTV-NPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLM 261 (360)
Q Consensus 183 wTas~~~ya~~il~~L~~~~-~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~ 261 (360)
|||+...||++|++.|++.. .+.+++. .|+.| |..++|||++|+. .+.++||||||+|.+|..
T Consensus 104 fTas~~~YA~~Vl~~LDp~~~~f~~Rl~---sRd~c--------g~~~~KdL~~ll~-----rdl~~vvIIDd~p~~~~~ 167 (442)
T 3ef1_A 104 YTMGTKAYAKEVAKIIDPTGKLFQDRVL---SRDDS--------GSLAQKSLRRLFP-----CDTSMVVVIDDRGDVWDW 167 (442)
T ss_dssp ECSSCHHHHHHHHHHHCTTSTTTTTCEE---CTTTS--------SCSSCCCGGGTCS-----SCCTTEEEEESCSGGGTT
T ss_pred EcCCCHHHHHHHHHHhccCCccccceEE---EecCC--------CCceeeehHHhcC-----CCcceEEEEECCHHHhCC
Confidence 99999999999999998765 3444443 35544 3357999998732 234899999999999999
Q ss_pred CCCCeeEecccccC-cCCCCCchHHHHHH
Q psy11202 262 NPRNGLRIRPFREA-HLNRGSDRELKRLG 289 (360)
Q Consensus 262 ~p~Ngi~I~~f~~~-~~~~~~D~~L~~L~ 289 (360)
|| |||+|.||.++ ..++-+|..|....
T Consensus 168 ~p-N~I~I~~~~fF~~~gD~n~~~l~~~~ 195 (442)
T 3ef1_A 168 NP-NLIKVVPYEFFVGIGDINSNFLAKST 195 (442)
T ss_dssp CT-TEEECCCCCCSTTCCCSCC-------
T ss_pred CC-CEEEcCCccccCCCCccccccccccc
Confidence 98 99999999754 24555676655543
No 7
>1v5t_A 8430435I17RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 2kx3_A
Probab=99.78 E-value=1.8e-19 Score=142.43 Aligned_cols=79 Identities=46% Similarity=0.687 Sum_probs=75.2
Q ss_pred ceEEEEEEECCeEEEE-EeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 3 DSLNLIIKWNSKEYKT-SLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 3 ~~i~i~vk~~g~~~~i-~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|+|+|||+|++|+| +|++++||.+||++|++.|||||++|||+|++|+|++++|+.+|++++|++|++|+|||++++
T Consensus 6 ~~m~i~Vk~~g~~~~i~~v~~~~TV~~lK~~I~~~~gip~~~QkLi~~k~~Gk~L~D~~~L~~~~i~~g~~l~l~~~~~~ 85 (90)
T 1v5t_A 6 SGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTRES 85 (90)
T ss_dssp CSCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTTCEEESCEETTEECCTTSBHHHHTCCTTEEEEEECCCSS
T ss_pred ceEEEEEEECCEEEEEEEeCCCCCHHHHHHHHHHHHCcCHHHeEEEeeccCCcCcCCCCCHHHcCCCCCCEEEEEecCcc
Confidence 3588999999999999 999999999999999999999999999998878999999999999999999999999999886
No 8
>1wgg_A Ubiquitin carboxyl-terminal hydrolase 14; ubiquitin specific protease 14, USP14, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.77 E-value=9e-19 Score=140.13 Aligned_cols=75 Identities=24% Similarity=0.554 Sum_probs=72.1
Q ss_pred ceEEEEEEECCeEE-EEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 3 DSLNLIIKWNSKEY-KTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 3 ~~i~i~vk~~g~~~-~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|+|+|||+|+.| +|+|++++||.+||++|++.|||||++|||+ |+|++++|+ +|++++|++|++|+|||++++
T Consensus 6 ~~m~i~Vk~~g~~~~~l~v~~~~TV~~lK~~I~~~tgip~~~QkLi---~~Gk~L~D~-tL~~~~I~~g~~i~l~~~~~~ 81 (96)
T 1wgg_A 6 SGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVM---VKGGTLKDD-DWGNIKMKNGMTVLMMGSADA 81 (96)
T ss_dssp CEEEEEEEETTEEEEEEEEESSSCHHHHHHHHHHHTCCCTTTSCCE---ETTEECCSS-CCCSCCCCSSCEEECCCCCCC
T ss_pred cEEEEEEEECCEEEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEE---ECCcCCCCC-CHHHCCCCCCCEEEEEecchh
Confidence 46999999999999 6999999999999999999999999999999 999999999 999999999999999999986
No 9
>1v86_A DNA segment, CHR 7, wayne state university 128, expressed; ubiquitin fold, structural genomics, D7WSU128E protein; HET: DNA; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.70 E-value=4e-17 Score=130.23 Aligned_cols=75 Identities=35% Similarity=0.536 Sum_probs=70.8
Q ss_pred ceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 3 DSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 3 ~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
++|+|+|||++++|.|+|++++||.+||++|++.|||||++|||+ |+|+++ |+.+|++++|++|++|+|||+++.
T Consensus 16 ~~~~i~Vk~~g~~~~i~v~~~~TV~~LK~~I~~~tgip~~~QrL~---~~Gk~L-dd~tL~~~~i~~g~~i~lv~~~~~ 90 (95)
T 1v86_A 16 ELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVM---YKGLVP-EDKTLREIKVTSGAKIMVVGSTIS 90 (95)
T ss_dssp CCEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCSCSTTCCCB---SSSBCC-SSSBHHHHCCCTTEEEEECCSSCC
T ss_pred ceEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEE---ECCeeC-CcCcHHHCCCCCCCEEEEEecccc
Confidence 469999999999999999999999999999999999999999999 999999 555999999999999999999876
No 10
>2kd0_A LRR repeats and ubiquitin-like domain-containing protein AT2G30105; ubiquitin-like protein, NESG, leucine-rich repeat, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.64 E-value=6.8e-16 Score=120.50 Aligned_cols=74 Identities=32% Similarity=0.473 Sum_probs=71.1
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
++.+.++|+|+.|.+++++++||.+||++|++.+||||++|+|+ |+|+.++|+.+|+++||++|++|+|+++++
T Consensus 12 ~~~~~~~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrL~---~~Gk~L~D~~tL~~~gi~~g~~l~l~~s~~ 85 (85)
T 2kd0_A 12 TIKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLI---FKGKVLVETSTLKQSDVGSGAKLMLMASQG 85 (85)
T ss_dssp CEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCCCTTTCEEE---ETTEECCTTCBTTTTTCCTTEEEEEECCCC
T ss_pred cEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHHCcChHHEEEE---ECCeECCCcCCHHHCCCCCCCEEEEEEeCC
Confidence 57889999999999999999999999999999999999999999 999999999999999999999999999874
No 11
>2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S
Probab=99.63 E-value=1.1e-15 Score=116.09 Aligned_cols=74 Identities=30% Similarity=0.458 Sum_probs=70.4
Q ss_pred ceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 3 DSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 3 ~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|+|.|+|+++|+.+.+++++++||.+||++|++.+|+|+++|+|+ |+|+.+.|+.+|+++||++|++|+|++++
T Consensus 3 M~m~i~vk~~g~~~~~~v~~~~tV~~LK~~i~~~~~i~~~~qrL~---~~gk~L~d~~tL~~~~i~~g~~i~l~~~~ 76 (77)
T 2bwf_A 3 MSLNIHIKSGQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLI---YSGKILKDDQTVESYHIQDGHSVHLVKSQ 76 (77)
T ss_dssp EEEEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBTGGGTCCTTCEEEEEECC
T ss_pred eEEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHhCCCHHHEEEE---ECCeEcCCCCCHHHcCCCCCCEEEEEEcC
Confidence 458999999999999999999999999999999999999999999 99999999999999999999999999875
No 12
>1wxv_A BAG-family molecular chaperone regulator-1; structural genomics, apoptosis, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.63 E-value=4.5e-16 Score=123.01 Aligned_cols=77 Identities=22% Similarity=0.369 Sum_probs=71.7
Q ss_pred CceEEEEEEECCeEEEEEeCCC-----CCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCC-ccccccccCCCCCEEEE
Q psy11202 2 GDSLNLIIKWNSKEYKTSLSKS-----NTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSD-DTKLADTNATDGFKLMV 75 (360)
Q Consensus 2 ~~~i~i~vk~~g~~~~i~v~~~-----~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D-~~~L~~~~l~~g~~i~l 75 (360)
+.+|+|+|||+|+.|+|+++++ +||.+||++|++.+||||++|||+ |+|+.|.| +.+|++++|++|++|+|
T Consensus 5 ~~~~~v~Vk~~~~~~~i~v~~~~~~~~~TV~~LK~~i~~~~gip~~~qrL~---~~Gk~L~D~~~~L~~~~i~~g~~i~l 81 (92)
T 1wxv_A 5 SSGLTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVIGVPQSFQKLI---FKGKSLKEMETPLSALGIQDGCRVML 81 (92)
T ss_dssp CSSEEEEEECSSSEEEEEECCCSSSSSCBHHHHHHHHHHHTCCCTTTCEEE---ETTEEECCSSSBHHHHTCCSSEEEEE
T ss_pred CCeEEEEEEECCEEEEEEECCCcCcccCcHHHHHHHHHHHHCcCHHHEEEE---ECCeecCCCcccHHHCCCCCCCEEEE
Confidence 4569999999999999999985 999999999999999999999999 99999998 56899999999999999
Q ss_pred EccCcc
Q psy11202 76 MGSLEQ 81 (360)
Q Consensus 76 ~gs~~~ 81 (360)
++++..
T Consensus 82 ~~~~~~ 87 (92)
T 1wxv_A 82 IGKKNS 87 (92)
T ss_dssp ESCCSC
T ss_pred EecCCC
Confidence 998765
No 13
>2dzm_A FAS-associated factor 1; ubiquitin-like domain, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=5.9e-16 Score=124.50 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=67.1
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
|+.++++|+|++|+|+|++++||.+||++|+++|||||++|||+|. +|+.++|+.+|++++|++|++|+|+-...
T Consensus 9 m~~~~vk~~Gk~~~v~v~~~~TV~~LK~~I~~~tgIpp~~QkLi~~--~~gkL~D~~tLs~~~I~~gstL~lvl~~~ 83 (100)
T 2dzm_A 9 MLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGW--KTGDVEDSTVLKSLHLPKNNSLYVLTPDL 83 (100)
T ss_dssp EEEEEEECSSCEEEEEEETTSBHHHHHHHHHHHHCCCTTTCCEECC--SSSCCCTTSBHHHHCCCSEEEEEECCSSS
T ss_pred eEEEEEEeCCeEEEEEECCCCcHHHHHHHHHHHHCCChhHeEEEcc--CCCCCCCcCCHHHcCCCCCCEEEEEecCC
Confidence 6889999999999999999999999999999999999999999963 44448999999999999999999875443
No 14
>2hj8_A Interferon-induced 17 kDa protein; HR2873B, human ISG15, structure, northeast structural genomics consortium, protein structure initiative, NESG; NMR {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=118.42 Aligned_cols=78 Identities=19% Similarity=0.222 Sum_probs=71.1
Q ss_pred CCceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 1 MGDSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 1 m~~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|+.+|.|.||+ .|+.+.++|++++||.+||++|++.+||||++|+|+ |+|+.+.|+.+|++++|++|++|+|+...
T Consensus 1 m~~~m~I~Vk~~~g~~~~~~v~~~~TV~~LK~~I~~~~gip~~~qrL~---~~Gk~L~D~~tL~~~~I~~g~~i~l~~~~ 77 (88)
T 2hj8_A 1 MDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLT---FEGKPLEDQLPLGEYGLKPLSTVFMNLRL 77 (88)
T ss_dssp -CCEEEEEEEETTSCEEEEEEESSSBHHHHHHHHHHHTCSCTTTEEEE---SSSSCCCTTSBHHHHHCSTTCEEEEEEC-
T ss_pred CCccEEEEEECCCCCEEEEEECCCCcHHHHHHHHHHHhCCChhHEEEE---ECCEECCCCCcHHHcCCCCCCEEEEEEEc
Confidence 88889999998 588999999999999999999999999999999999 99999999999999999999999999776
Q ss_pred cc
Q psy11202 80 EQ 81 (360)
Q Consensus 80 ~~ 81 (360)
..
T Consensus 78 ~g 79 (88)
T 2hj8_A 78 RG 79 (88)
T ss_dssp --
T ss_pred CC
Confidence 54
No 15
>3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens}
Probab=99.60 E-value=3e-15 Score=114.63 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=69.5
Q ss_pred CCceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 1 MGDSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 1 m~~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
|+..|.|.||+ +|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.++|+.+|++++|++|++|+|+..
T Consensus 1 ~~~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrL~---~~G~~L~d~~tL~~~~i~~~~~l~l~~r 76 (79)
T 3phx_B 1 MDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLT---FEGKPLEDQLPLGEYGLKPLSTVFMNLR 76 (79)
T ss_dssp --CCEEEEEECTTSCEEEEEECTTSBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTSBGGGGTCCTTCEEEEEEC
T ss_pred CCCCEEEEEEeCCCCEEEEEECCcChHHHHHHHHHhhcCCCHHHEEEE---ECCEECCCCCcHHHCCCCCCCEEEEEEe
Confidence 67789999998 789999999999999999999999999999999999 9999999999999999999999998753
No 16
>2lxa_A Ubiquitin-like protein MDY2; ubiquitin-like domain, protein-protein interaction, SGT2 BIN domain, GET pathway, protein binding; NMR {Saccharomyces cerevisiae}
Probab=99.59 E-value=6.5e-16 Score=121.22 Aligned_cols=74 Identities=23% Similarity=0.319 Sum_probs=67.9
Q ss_pred EEEEEEE-CCeEEEEEeC--CCCCHHHHHHHH-HHHhCCCccCeeeeccccCCCCCCCccccccccC-CCCCEEEEEccC
Q psy11202 5 LNLIIKW-NSKEYKTSLS--KSNTVLELKQEI-LKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNA-TDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~--~~~Tv~~LK~~I-~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l-~~g~~i~l~gs~ 79 (360)
|.|+||+ .|++|+|+++ +++||.+||++| ++.+|+||++|||+ |+|++|+|+.+|++++| ++|++|+|+|++
T Consensus 2 mqI~VKtl~g~~~~i~v~v~~~~TV~~lK~~I~~~~~gip~~~QrLi---~~Gk~L~D~~tL~~y~I~~~~stl~v~~~~ 78 (87)
T 2lxa_A 2 VHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLL---LKGKVLHDNLFLSDLKVTPANSTITVMIKP 78 (87)
T ss_dssp CEEEEEECSSSCEECCEECCTTCBHHHHHHHHHHTTSCSSSTTEEEE---ETTEECCTTCBHHHHCCCGGGCEEEEEECC
T ss_pred EEEEEEcCCCCEEEEEEcCCCCCcHHHHHHHHHHHhcCCChHHEEEE---ECCEECcCcCCHHHcCCCCCCCEEEEEcCC
Confidence 6899998 6777887754 999999999999 99999999999999 99999999999999999 699999999998
Q ss_pred cc
Q psy11202 80 EQ 81 (360)
Q Consensus 80 ~~ 81 (360)
.-
T Consensus 79 ~~ 80 (87)
T 2lxa_A 79 NL 80 (87)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 17
>2kk8_A Uncharacterized protein AT4G05270; solution arabidopsis thaliana, uncharacterized putative protein, NESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.57 E-value=4.2e-15 Score=115.80 Aligned_cols=72 Identities=15% Similarity=0.280 Sum_probs=68.4
Q ss_pred EEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCC-CCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKI-PSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~-l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|+|.|| +.|+.++++|++++||++||++|++.+|+||++|+|+ |+|+. ++|+.+|++++|++|++|+|+.+|
T Consensus 11 ~~i~vk~l~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~lL~D~~tL~~y~I~~gs~i~lv~~p 84 (84)
T 2kk8_A 11 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLI---VDGIVILREDLTVEQCQIVPTSDIQLEVSS 84 (84)
T ss_dssp EEEEEEETTSCEEEEEECTTSBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCCSSSBHHHHTCCTTSCEEEEECC
T ss_pred eEEEEEecCCcEEEEEECCCChHHHHHHHHHHHHCcChHHEEEE---ECCEEecCCcCCHHHcCCCCCCEEEEEEcC
Confidence 889998 5899999999999999999999999999999999999 99999 999999999999999999998764
No 18
>3m62_B UV excision repair protein RAD23; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=3.9e-15 Score=120.97 Aligned_cols=74 Identities=24% Similarity=0.372 Sum_probs=68.6
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
|.|+||+ +|+.|.|+|++++||.+||++|++.+|||+++|+|+ |+|+.|.|+.+|+++||++|++|+|+.+...
T Consensus 2 m~I~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~~~~i~~g~~i~lv~~~~~ 76 (106)
T 3m62_B 2 VSLTFKNFKKEKVPLDLEPSNTILETKTKLAQSISCEESQIKLI---YSGKVLQDSKTVSECGLKDGDQVVFMVSQKK 76 (106)
T ss_dssp -CEEEECTTCCEEEECCCTTSBHHHHHHHHHHTTTSCGGGCEEE---ETTEECCTTSBTTTTTCCTTCEEEEECCC--
T ss_pred EEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCCChhhEEEE---ECCEECCCcCCHHHcCCCCCCEEEEEEcCCC
Confidence 6799996 899999999999999999999999999999999999 9999999999999999999999999988765
No 19
>3m63_B Ubiquitin domain-containing protein DSK2; armadillo-like repeats, UBL conjugation pathway, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.3e-15 Score=122.81 Aligned_cols=73 Identities=30% Similarity=0.478 Sum_probs=69.2
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
+|+|+|||+|+.+.++|++++||.+||++|++.+|+||++|+|+ |+|+.|+|+.+|+++||++|++|+|+.+.
T Consensus 28 ~i~I~Vk~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~~~gI~~g~tI~lv~~~ 100 (101)
T 3m63_B 28 SLNIHIKSGQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLI---YSGKILKDDQTVESYHIQDGHSVHLVKSQ 100 (101)
T ss_dssp -CCEEEECSSCCCCBCCCTTSBHHHHHHHHHHHHSCCSTTCCEE---ETTEECCTTSBTTTTTCCTTEEEEECCCC
T ss_pred EEEEEEEECCEEEEEEeCCCCCHHHHHHHHHHHHCcChHHEEEE---ECCEECCCcCcHHHCCCCCCCEEEEEeCC
Confidence 57899999999999999999999999999999999999999999 99999999999999999999999999764
No 20
>4a20_A Ubiquitin-like protein MDY2; protein binding, GET-pathway, tail-anchored proteins; 1.78A {Saccharomyces cerevisiae} PDB: 2lxc_A 4goc_A
Probab=99.54 E-value=8.1e-15 Score=117.47 Aligned_cols=73 Identities=25% Similarity=0.358 Sum_probs=67.3
Q ss_pred eEEEEEEE-CCeEEEE--EeCCCCCHHHHHHHH-HHHhCCCccCeeeeccccCCCCCCCccccccccC-CCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKT--SLSKSNTVLELKQEI-LKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNA-TDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i--~v~~~~Tv~~LK~~I-~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l-~~g~~i~l~gs 78 (360)
.|.|+||+ +|++|++ ++++++||++||++| ++.+|+||++|||+ |+|++|.|+.+|++++| ++|++|+||++
T Consensus 19 ~m~I~VKtl~g~~~~i~v~v~~~~TV~~lK~~I~~~~~gip~~~QrLi---~~Gk~L~D~~tL~dy~I~~~g~ti~lmvs 95 (98)
T 4a20_A 19 AVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLL---LKGKVLHDNLFLSDLKVTPANSTITVMIK 95 (98)
T ss_dssp CEEEEEEECSSSCEEEEEEECTTCBHHHHHHHHHHTTSCSCGGGEEEE---ETTEEECTTCBGGGSCCBTTBCEEEEEEC
T ss_pred CEEEEEEcCCCCEEEEEEecCCCChHHHHHHHHHHHhcCCChhhEEEE---ECCEECcCcCCHHHcCcCCCCCEEEEEEe
Confidence 59999998 6777776 566999999999999 99999999999999 99999999999999999 99999999987
Q ss_pred C
Q psy11202 79 L 79 (360)
Q Consensus 79 ~ 79 (360)
+
T Consensus 96 k 96 (98)
T 4a20_A 96 P 96 (98)
T ss_dssp C
T ss_pred C
Confidence 5
No 21
>2wyq_A HHR23A, UV excision repair protein RAD23 homolog A; DNA binding protein, DNA excision repair, proteasomal degrad polyubiquitin; 1.65A {Homo sapiens} PDB: 1p98_A 1p9d_U 1p1a_A
Probab=99.54 E-value=2.2e-14 Score=111.10 Aligned_cols=76 Identities=26% Similarity=0.325 Sum_probs=69.3
Q ss_pred ceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHH---hCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 3 DSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQ---TGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~---tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
++|.|+||+ .|+.+.+++++++||.+||++|++. +|+|+++|+|+ |+|+.+.|+.+|++++|++|++|+|+.+
T Consensus 4 ~~m~i~vk~~~g~~~~~~v~~~~TV~~lK~~i~~~~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~~i~~g~~i~l~~~ 80 (85)
T 2wyq_A 4 MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLI---YAGKILSDDVPIRDYRIDEKNFVVVMVT 80 (85)
T ss_dssp CCEEEEEEETTSCEEEEEECTTSBHHHHHHHHHHHHCTTTCCGGGEEEE---ETTEECCTTSBGGGGCCCTTSEEEEEEC
T ss_pred ceEEEEEEECCCCEEEEEECCCCCHHHHHHHHHhhccccCCCHHHeEEE---ECCEECcCCCCHHHcCCCCCCEEEEEEc
Confidence 468999998 4889999999999999999999998 99999999999 9999999999999999999999999987
Q ss_pred Ccc
Q psy11202 79 LEQ 81 (360)
Q Consensus 79 ~~~ 81 (360)
+..
T Consensus 81 ~~~ 83 (85)
T 2wyq_A 81 KTK 83 (85)
T ss_dssp ---
T ss_pred CCC
Confidence 654
No 22
>4eew_A Large proline-rich protein BAG6; ubiquitin-like fold, GP78-binding, chaperone; 1.30A {Homo sapiens}
Probab=99.52 E-value=3.5e-14 Score=110.94 Aligned_cols=69 Identities=26% Similarity=0.421 Sum_probs=66.1
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
+|.|.||+ +|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.++|+.+|+++|| +|++|+|+
T Consensus 17 ~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~~i-~g~~i~lv 86 (88)
T 4eew_A 17 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI---YQGRVLQDDKKLQEYNV-GGKVIHLV 86 (88)
T ss_dssp EEEEEEEETTSCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTSBGGGGTC-TTEEEEEE
T ss_pred eEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEE---ECCEECCCCCcHHHcCC-CCcEEEEE
Confidence 58999999 689999999999999999999999999999999999 99999999999999999 89999986
No 23
>1uel_A HHR23B, UV excision repair protein RAD23 homolog B; UBL, UIM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.51 E-value=5.4e-14 Score=111.81 Aligned_cols=74 Identities=27% Similarity=0.361 Sum_probs=69.2
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHH---hCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQ---TGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~---tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
|.|+||+ .|+.+.++|++++||.+||++|++. +|||+++|+|+ |+|+.++|+.+|+++||++|++|+|+.+..
T Consensus 1 M~I~Vk~~~g~~~~~~v~~~~TV~~LK~~I~~~~~~~gip~~~qrLi---~~Gk~L~D~~tL~~ygI~~g~~i~l~~~~~ 77 (95)
T 1uel_A 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLI---YAGKILNDDTALKEYKIDEKNFVVVMVTKP 77 (95)
T ss_dssp CEEEEEETTCCEEEEECCTTSBHHHHHHHHHHHHCTTTCCTTTEEEE---ETTEECCTTSBGGGGTCCSSSEEEEEESSC
T ss_pred CEEEEEeCCCCEEEEEECCCCHHHHHHHHHHhhcccCCCChhhEEEE---ECCEECCCcCcHHHCCCCCCCEEEEEEeCC
Confidence 4689998 5889999999999999999999999 89999999999 999999999999999999999999998775
Q ss_pred c
Q psy11202 81 Q 81 (360)
Q Consensus 81 ~ 81 (360)
.
T Consensus 78 ~ 78 (95)
T 1uel_A 78 K 78 (95)
T ss_dssp C
T ss_pred C
Confidence 5
No 24
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=3.1e-14 Score=109.05 Aligned_cols=73 Identities=25% Similarity=0.312 Sum_probs=68.3
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
+|.|.|+. +|+.+.+++++++||.+||++|++.+|+|+++|+|+ |+|+.+.|+.+|+++||++|++|+|+..+
T Consensus 7 ~m~i~vk~~~g~~~~~~v~~~~tV~~LK~~i~~~~~i~~~~qrL~---~~gk~L~d~~tL~~~~i~~g~~i~l~~~~ 80 (81)
T 2dzi_A 7 GMQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLL---FKGKALADGKRLSDYSIGPNSKLNLVVKP 80 (81)
T ss_dssp SEEEEEEETTSCEEEEEECSSCBHHHHHHHHHHHTCCCTTTCEEE---ETTEECCTTSBGGGGTCCSSBCCEEECCC
T ss_pred cEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHHEEEE---ECCeECCCCCcHHHcCCCCCCEEEEEEeC
Confidence 58899985 688999999999999999999999999999999999 99999999999999999999999998753
No 25
>4fbj_B NEDD8; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.60A {Homo sapiens} PDB: 4f8c_B
Probab=99.51 E-value=2.7e-14 Score=111.98 Aligned_cols=74 Identities=23% Similarity=0.398 Sum_probs=67.7
Q ss_pred EEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 5 LNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 5 i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
|.|.|| +.|++++|++++++||.+||++|++.+|+||++|+|+ |+|+.|+|+.+|++++|++|++|+|+....+
T Consensus 1 M~I~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~~i~~g~~l~l~~rl~G 75 (88)
T 4fbj_B 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLI---YSGKQMNDEKTAADYKILGGSVLHLVLALRG 75 (88)
T ss_dssp CEEEEEETTCCEEEEECCTTCBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCTTSBTTTTTCCTTCEEEEECBCC-
T ss_pred CEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcChhHEEEE---ECCeECCCCCcHHHcCCCCCCEEEEEEECCC
Confidence 358889 5899999999999999999999999999999999999 9999999999999999999999999855443
No 26
>2kan_A Uncharacterized protein AR3433A; ubiquitin fold, alpha+beta, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.51 E-value=2.9e-14 Score=113.33 Aligned_cols=75 Identities=21% Similarity=0.291 Sum_probs=70.0
Q ss_pred ceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCc-cccccccCCCCCEEEEEccCc
Q psy11202 3 DSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDD-TKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 3 ~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~-~~L~~~~l~~g~~i~l~gs~~ 80 (360)
..|.|.||+.++++.|+|++++||.+||++|++.+||||++|+|+ |+|++|+|+ .+|++++|++|++|+|+....
T Consensus 14 ~~~~I~Vk~~~~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~~tL~~ygI~~gstl~lv~r~~ 89 (94)
T 2kan_A 14 RKIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLY---YSGIELADDYRNLNEYGITEFSEIVVFLKSI 89 (94)
T ss_dssp CCEEEEEECSSCEEEEEECTTCBHHHHHHHHHHHSSSCTTTEEEE---ETTEEECCTTSBHHHHTCCTTEEEEEEECCC
T ss_pred CCEEEEEEcCCcEEEEEECCCCcHHHHHHHHHHHHCcCHHHEEEE---ECCEECCCCcccHHHCCCCCCCEEEEEEeCC
Confidence 358999999777999999999999999999999999999999999 999999999 999999999999999987654
No 27
>3v6c_B Ubiquitin; structural genomics, structural genomics consortium, SGC, UB protease, hydrolase-signaling protein complex; 1.70A {Homo sapiens} PDB: 3v6e_B
Probab=99.51 E-value=4.2e-14 Score=111.42 Aligned_cols=72 Identities=24% Similarity=0.405 Sum_probs=68.2
Q ss_pred eEEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|.|.|| ++|+.+.|++++++||.+||++|++.+|||+++|+|+ |+|+.++|+.+|+++||++|++|+|+..
T Consensus 17 ~m~i~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrL~---~~Gk~L~D~~tL~~~gi~~g~~i~l~~r 89 (91)
T 3v6c_B 17 SMQIFVNTLTGTHITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLR 89 (91)
T ss_dssp SEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCTTCBTGGGTCCTTCEEEEECC
T ss_pred eEEEEEEeCCCCEEEEEECCCCCHHHHHHHHHhhhCCChhhEEEE---ECCeECCCcCcHHHCCCCCCCEEEEEEe
Confidence 4899999 5889999999999999999999999999999999999 9999999999999999999999998853
No 28
>2klc_A Ubiquilin-1; ubiquitin-like, structural genomics, PSI-2, protein structur initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens}
Probab=99.50 E-value=5.5e-14 Score=113.18 Aligned_cols=74 Identities=20% Similarity=0.338 Sum_probs=70.1
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
+|.|.||+.|+.+.++|++++||.+||++|++.+||||++|+|+ |+|+.|+|+.+|+++||++|++|+|+....
T Consensus 25 ~m~I~Vk~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~gI~~g~~I~l~~~~~ 98 (101)
T 2klc_A 25 IMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLI---FAGKILKDQDTLSQHGIHDGLTVHLVIKTQ 98 (101)
T ss_dssp CEEEEEECSSCEEEEEECSCCCHHHHHHHHHHHHTCCGGGEEEE---ETTEEECTTCCTGGGTCCTTCEEEEEECCS
T ss_pred eEEEEEEeCCcEEEEEECCCCCHHHHHHHHHHHHCcChhhEEEE---ECCEECCCcCcHHHcCCCCCCEEEEEEcCC
Confidence 58999999889999999999999999999999999999999999 999999999999999999999999997653
No 29
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=99.49 E-value=7.1e-14 Score=105.41 Aligned_cols=71 Identities=23% Similarity=0.386 Sum_probs=66.4
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
|.|.||+ .|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|+++|+++|++|+|+..
T Consensus 1 M~i~vk~~~g~~~~~~v~~~~tv~~lK~~i~~~~~i~~~~q~L~---~~g~~L~d~~tL~~~~i~~g~~i~l~~~ 72 (76)
T 1ndd_A 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLI---YSGKQMNDEKTAADYKILGGSVLHLVLA 72 (76)
T ss_dssp CEEEEECTTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBGGGGTCCTTCEEEEEEC
T ss_pred CEEEEECCCCCEEEEEECCCChHHHHHHHHHHHHCcChHHEEEE---ECCEECCCCCcHHHcCCCCCCEEEEEEe
Confidence 4689998 688899999999999999999999999999999999 9999999999999999999999998754
No 30
>1yqb_A Ubiquilin 3; structural genomics consortium, ubiquitin, ubiquitin-like domain, structural genomics, signaling protein SGC; 2.00A {Homo sapiens} SCOP: d.15.1.1
Probab=99.48 E-value=7.1e-14 Score=112.33 Aligned_cols=76 Identities=24% Similarity=0.366 Sum_probs=70.4
Q ss_pred ceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 3 DSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 3 ~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|.|.||+.++++.++|++++||.+||++|++.+|||+++|+|+ |+|+.++|+.+|++++|++|++|+|+.....
T Consensus 21 ~~m~I~Vk~~~g~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~~ygI~~gstI~l~~r~~~ 96 (100)
T 1yqb_A 21 HLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLI---FAGKILKDPDSLAQCGVRDGLTVHLVIKRQH 96 (100)
T ss_dssp TEEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTSBHHHHTCCTTCEEEEEECCCC
T ss_pred CeEEEEEEcCCCcEEEEECCCCcHHHHHHHHHHHHCcChhhEEEE---ECCEECCCcCcHHHCCCCCCCEEEEEEcCCC
Confidence 369999999766789999999999999999999999999999999 9999999999999999999999999976544
No 31
>3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide binding protein; 1.40A {Saccharomyces cerevisiae} PDB: 3plv_A 1m94_A 1p0r_A
Probab=99.48 E-value=8.9e-14 Score=109.61 Aligned_cols=71 Identities=18% Similarity=0.284 Sum_probs=67.4
Q ss_pred ceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 3 DSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
.+|.|.||. .|+++.|++++++||.+||++|++.+|+||++|+|+ |.|++++|+.+|++++|.+|++|.|-
T Consensus 20 ~mIqI~Vk~~~Gkk~~v~v~p~DTI~~LK~~I~~k~Gip~~qQrLi---f~Gk~LkD~~TL~dY~I~dgstLhL~ 91 (93)
T 3plu_A 20 HMIEVVVNDRLGKKVRVKCLGEDSVGDFKKVLSLQIGTQPNKIVLQ---KGGSVLKDHISLEDYEVHDQTNLELY 91 (93)
T ss_dssp CEEEEEEECTTSCEEEEEEETTSBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTSBTGGGTCCTTCEEEEE
T ss_pred ceEEEEEECCCCCEEEEEECCcCHHHHHHHHHHHHhCCCHHHEEEE---eCCEEccCcCCHHHcCCCCCCEEEEE
Confidence 479999995 799999999999999999999999999999999999 99999999999999999999999873
No 32
>3dbh_I NEDD8; cell cycle, activating enzyme, apoptosis, membrane, UBL conjugation pathway, ATP-binding, ligase, nucleotide- binding, polymorphism; 2.85A {Homo sapiens} SCOP: d.15.1.1 PDB: 3dbr_I 3dbl_I
Probab=99.48 E-value=8.7e-14 Score=108.33 Aligned_cols=72 Identities=24% Similarity=0.385 Sum_probs=68.2
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
+|.|.||. .|+.+.|+|++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+-.
T Consensus 12 ~m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrL~---~~G~~L~d~~tL~~~~i~~~~~i~l~~r 84 (88)
T 3dbh_I 12 SMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLI---YSGKQMNDEKTAADYKILGGSVLHLVLR 84 (88)
T ss_dssp CEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCCEE---ETTEECCTTSBGGGGTCCTTCEEEECCC
T ss_pred cEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcCHHHEEEE---ECCeECCCCCcHHHcCCCCCCEEEEEEe
Confidence 58999995 889999999999999999999999999999999999 9999999999999999999999998753
No 33
>4dwf_A HLA-B-associated transcript 3; ubiquitin-like domain, BAT3 protein, PF00240, structural GEN joint center for structural genomics, JCSG; 1.80A {Homo sapiens} PDB: 1wx9_A
Probab=99.47 E-value=1.3e-13 Score=108.10 Aligned_cols=75 Identities=25% Similarity=0.395 Sum_probs=69.8
Q ss_pred ceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 3 DSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|.|.||+ .|+.+.|+|++++||.+||++|++.+|+|+++|+|+ |+|+.|.|+.+|++++| +|++|+|+.....
T Consensus 4 ~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrLi---~~Gk~L~d~~tL~~~~i-~g~~i~l~~~~~~ 79 (90)
T 4dwf_A 4 DSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI---YQGRVLQDDKKLQEYNV-GGKVIHLVERAPP 79 (90)
T ss_dssp CEEEEEEEETTCCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTSBGGGGTC-TTEEEEEEECCCC
T ss_pred cEEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEE---ECCeECCCCCCHHHcCC-CCcEEEEEecCCC
Confidence 368999998 689999999999999999999999999999999999 99999999999999999 8999999876554
No 34
>2l7r_A Ubiquitin-like protein FUBI; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; NMR {Homo sapiens}
Probab=99.47 E-value=4.8e-14 Score=111.76 Aligned_cols=71 Identities=24% Similarity=0.332 Sum_probs=66.8
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|.|.||+ |+.+.++|++++||.+||++|++.+||||++|+|+ |+|+.++|+.+|++++|++|++|+|+..
T Consensus 19 ~m~I~Vk~-g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~y~I~~gstI~lv~r 89 (93)
T 2l7r_A 19 SMQLFVRA-QELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVL---LAGAPLEDEATLGQCGVEALTTLEVAGR 89 (93)
T ss_dssp -CEEEEES-SSEEEEECCSSCBHHHHHHHHHHHHTCCGGGCEEE---ETTEECCTTSBHHHHTCCSSCEEEEECC
T ss_pred cEEEEEEC-CCEEEEEeCCCCcHHHHHHHHHHHhCcChhHEEEE---ECCEECCCCCcHHHCCCCCCCEEEEEEe
Confidence 48899999 88999999999999999999999999999999999 9999999999999999999999998754
No 35
>3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1
Probab=99.47 E-value=1.3e-13 Score=106.50 Aligned_cols=72 Identities=25% Similarity=0.408 Sum_probs=68.0
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
+|.|.||+ .|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+-.
T Consensus 3 ~m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~~i~~~~qrL~---~~g~~L~d~~tL~~~~i~~~~~l~l~~r 75 (85)
T 3mtn_B 3 HMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKWSTLFLLLR 75 (85)
T ss_dssp CEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCTTSBTGGGTCCTTCEEEEECC
T ss_pred eEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcChHHEEEE---ECCEECCCCCCHHHcCCCCCCEEEEEEE
Confidence 58899997 678999999999999999999999999999999999 9999999999999999999999998843
No 36
>4hcn_B Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidase, NEDD8, protein binding; 2.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=7e-14 Score=111.79 Aligned_cols=72 Identities=25% Similarity=0.406 Sum_probs=68.0
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|.|.||. .|+.|.|+|++++||.+||++|++.+||||++|+|+ |+|+.|+|+.+|++++|++|++|+|+..
T Consensus 22 ~m~I~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~~i~~g~~i~l~~r 94 (98)
T 4hcn_B 22 PMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLR 94 (98)
T ss_dssp CCEEEEEETTCCEEEEECCTTCBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCTTCBSGGGTCCTTEEEEEECB
T ss_pred eEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHhCCChhHEEEE---ECCEECCCCCcHHHCCCCCCCEEEEEEe
Confidence 48899995 889999999999999999999999999999999999 9999999999999999999999998854
No 37
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=99.47 E-value=1.3e-13 Score=103.95 Aligned_cols=72 Identities=26% Similarity=0.420 Sum_probs=66.7
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|.|+|++ .|+.+.+++++++||.+||++|++.+|+|+++|+|+ |+|+.+.|+.+|+++++++|++|+|+...
T Consensus 1 M~i~vk~~~g~~~~i~v~~~~tv~~lK~~i~~~~~i~~~~q~L~---~~g~~L~d~~tL~~~~i~~g~~i~l~~~~ 73 (76)
T 3a9j_A 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQRESTLHLVLRL 73 (76)
T ss_dssp CEEEEEETTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTCBTGGGTCCTTCEEEEEECC
T ss_pred CEEEEEcCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEE---ECCeECCCCCcHHHcCCCCCCEEEEEEeC
Confidence 4688997 688899999999999999999999999999999999 99999999999999999999999988543
No 38
>1v5o_A 1700011N24RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.46 E-value=1.3e-13 Score=111.04 Aligned_cols=75 Identities=11% Similarity=0.186 Sum_probs=68.1
Q ss_pred eEEEEEEE--CC---eEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCc-cccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKW--NS---KEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDD-TKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~--~g---~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~-~~L~~~~l~~g~~i~l~g 77 (360)
+|.|+|++ ++ +.|.|+|++++||.+||++|++.+|||+++|+|+ |+|+.|.|+ .+|++++|++|++|+|+.
T Consensus 7 ~m~I~Vk~~~~~~~~~~~~i~v~~~~TV~~LK~~I~~~~gip~~~qrL~---~~gk~L~D~~~tL~~ygI~~g~~l~l~~ 83 (102)
T 1v5o_A 7 GMLITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIV---YMEQLLTDDHCSLGSYGLKDGDMVVLLQ 83 (102)
T ss_dssp CEEEEEEECCCCCCCCEEEEEECTTCBHHHHHHHHHHHTCCCGGGBCEE---ETTEEECCSSSBHHHHTCCTTEEEEECB
T ss_pred eEEEEEEECCCCcCceEEEEEcCCCCCHHHHHHHHHHHHCcChHHeEEE---ECCEECCCCcccHHHCCCCCCCEEEEEE
Confidence 47777776 44 7899999999999999999999999999999999 999999988 689999999999999998
Q ss_pred cCcc
Q psy11202 78 SLEQ 81 (360)
Q Consensus 78 s~~~ 81 (360)
....
T Consensus 84 ~~~g 87 (102)
T 1v5o_A 84 KDNV 87 (102)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7655
No 39
>1wx8_A Riken cDNA 4931431F19; ubiquitin-like domain, ubiquilin 1-like, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.46 E-value=6.7e-14 Score=111.25 Aligned_cols=76 Identities=22% Similarity=0.253 Sum_probs=71.1
Q ss_pred ceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 3 DSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 3 ~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|.|.||+.|+.+.++|++++||.+||++|++.+|||+++|+|+ |+|+.|+|+.+|++++|++|++|+|+.....
T Consensus 16 ~~m~i~Vk~~g~~~~~~v~~~~TV~~LK~~I~~~~gip~~~qrL~---~~Gk~L~D~~tL~~~gi~~g~~i~l~~~~~~ 91 (96)
T 1wx8_A 16 RIIRVSVKTPQDCHEFFLAENSNVRRFKKQISKYLHCNADRLVLI---FTGKILRDQDILSQRGILDGSTVHVVVRSHS 91 (96)
T ss_dssp CEEEEEEECSSSEEEEEEETTCCHHHHHHHHHHHTCSCTTTBCCE---ETTEECCTTSCHHHHTCCTTEEEECCBCCSS
T ss_pred CcEEEEEEECCeEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEE---ECCEECCCcCCHHHCCCCCCCEEEEEEeCCC
Confidence 369999999999999999999999999999999999999999999 9999999999999999999999999876543
No 40
>1wju_A NEDD8 ultimate buster-1; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.46 E-value=7.3e-14 Score=111.96 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=65.4
Q ss_pred EEEEEEE-C----CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIKW-N----SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk~-~----g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
.+|+|+. + +++++|+|++++||.+||++|++..||||++|||| |+||+|+|+.+|++++|++|++||+|-..
T Consensus 16 ati~V~~~~~~~~~~~~~lev~~~~TV~~lK~kI~~k~gip~~qQrLI---~~GKiL~D~~TL~~y~I~~gsti~vl~lr 92 (100)
T 1wju_A 16 ATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFGLQENYIKIV---INKKQLQLGKTLEEQGVAHNVKAMVLELK 92 (100)
T ss_dssp EEEEEECCTTTCCSSSEEEEEESSSBHHHHHHHHHHHTTCCSTTCEEE---ETTEECCTTSBHHHHTCCSSEEEEEECCC
T ss_pred EEEEEEecCCCCCCcEEEEEeCCcCHHHHHHHHHHHHHCcCHHHeEEE---eCCeECCCCCcHHHcCCCCCCEEEEEEEC
Confidence 4555553 2 56799999999999999999999999999999999 99999999999999999999999888554
Q ss_pred cc
Q psy11202 80 EQ 81 (360)
Q Consensus 80 ~~ 81 (360)
..
T Consensus 93 g~ 94 (100)
T 1wju_A 93 QS 94 (100)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 41
>1yx5_B Ubiquitin; proteasome, UIM, hydrolase; NMR {Homo sapiens} SCOP: d.15.1.1 PDB: 1yx6_B
Probab=99.46 E-value=1.6e-13 Score=109.48 Aligned_cols=88 Identities=23% Similarity=0.319 Sum_probs=68.5
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcchh
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQSI 83 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~~i 83 (360)
|.|+||+ .|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|+++||++|++|+|+....+
T Consensus 1 M~I~Vk~~~g~~~~~~v~~~~TV~~LK~~I~~~~gi~~~~qrL~---~~Gk~L~D~~tL~~~gi~~g~~i~l~~~~~g-- 75 (98)
T 1yx5_B 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-- 75 (98)
T ss_dssp CEEEEEETTSCEEEEECCTTCBHHHHHHHHHHHTCCCGGGEEEE---ETTEECCTTSBTGGGTCCTTCEEEEEECCCC--
T ss_pred CEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcChhhEEEE---ECCEECCCCCCHHHcCCCCCCEEEEEEeCCC--
Confidence 4689998 688899999999999999999999999999999999 9999999999999999999999999876543
Q ss_pred hhccCCCCCccccccccchhhh
Q psy11202 84 QEASTKPLDIPEIVDDFDIEED 105 (360)
Q Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~ 105 (360)
-.+.|..+++.++.
T Consensus 76 --------G~~i~~~~v~~~~~ 89 (98)
T 1yx5_B 76 --------GRDPNSSSVDKLAA 89 (98)
T ss_dssp --------C-------------
T ss_pred --------CCcCccccCCCchh
Confidence 12355666655443
No 42
>1ttn_A DC-UBP, dendritic cell-derived ubiquitin-like protein; ubiquitin-like domain, solution structure, signaling protein; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.46 E-value=1.4e-13 Score=111.76 Aligned_cols=75 Identities=20% Similarity=0.373 Sum_probs=70.9
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.|.|.||+ .|+.+.++|++++||.+||.+|++.+|||+++|+|+ |+|+.+.|+.+|+++||++|++|+|+.+...
T Consensus 23 ~m~I~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~ygI~~g~ti~lv~~~~~ 98 (106)
T 1ttn_A 23 ECQLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWF---FSGRPLTDKMKFEELKIPKDYVVQVIVSQPV 98 (106)
T ss_dssp SEEEEEEETTTEEEEEEECTTSHHHHHHHHHHHTTCCCSTTCEEE---ETTEECCTTSHHHHCCCSSSCEEEEECCCSS
T ss_pred eEEEEEEcCCCCEEEEEeCCCCcHHHHHHHHHHHHCcCcccEEEE---ECCEECCCCCcHHHcCCCCCCEEEEEEeCCC
Confidence 58999998 689999999999999999999999999999999999 9999999999999999999999999987654
No 43
>1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.46 E-value=1.8e-13 Score=106.43 Aligned_cols=74 Identities=22% Similarity=0.298 Sum_probs=69.3
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
+|.|.||+ .|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+....
T Consensus 7 ~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gi~~~~qrL~---~~Gk~L~d~~tL~~~~i~~g~~i~l~~~~~ 81 (87)
T 1wh3_A 7 GIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLE---FQGQVLQDWLGLGIYGIQDSDTLILSKKKG 81 (87)
T ss_dssp SEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTTEEEE---ETTEECCSSSBHHHHTCCTTEEEEEEECSC
T ss_pred CEEEEEEcCCCCEEEEEeCCCChHHHHHHHHHHHhCCChHHEEEE---ECCEEccCCCCHHHCCCCCCCEEEEEEecc
Confidence 58999998 688999999999999999999999999999999999 999999999999999999999999986543
No 44
>1uh6_A Ubiquitin-like 5; beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.46 E-value=7.6e-14 Score=111.85 Aligned_cols=70 Identities=23% Similarity=0.263 Sum_probs=66.8
Q ss_pred eEEEEEEEC-CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 4 SLNLIIKWN-SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~-g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
+|.|.||.. |+++.|++++++||.+||++|++.+|+||++|+|+ |.|++|+|+.+|++++|++|++|.|.
T Consensus 28 mm~I~VKtl~Gk~i~lev~p~dTV~~lK~~Ia~k~Gip~~qQrLi---~~Gk~L~D~~TL~dygI~~gstlhL~ 98 (100)
T 1uh6_A 28 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLK---KWYTIFKDHVSLGDYEIHDGMNLELY 98 (100)
T ss_dssp EEEEEEECSSSSCEEEEEETTSBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCSSCBHHHHTCCTTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEeCCCCcHHHHHHHHHHHhCCCHHHEEEE---ECCEECCCCCCHHHcCCCCCCEEEEE
Confidence 699999974 89999999999999999999999999999999999 99999999999999999999999875
No 45
>2faz_A Ubiquitin-like containing PHD and ring finger DOM protein 1; cell cycle, DNA damage, DNA repair, DNA-binding, ligase, Met binding, nuclear protein; 2.00A {Homo sapiens} SCOP: d.15.1.1
Probab=99.45 E-value=2.1e-13 Score=103.92 Aligned_cols=72 Identities=22% Similarity=0.267 Sum_probs=66.4
Q ss_pred eEEEEEEE-CCeE-EEEE-eCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKE-YKTS-LSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~-~~i~-v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|.|.||+ .|++ +.++ +++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|+++|+++|++|+|+-.
T Consensus 2 ~m~i~Vk~~~g~~~~~l~~v~~~~tv~~lK~~i~~~~gip~~~qrL~---~~g~~L~d~~tL~~~~i~~g~~i~l~~r 76 (78)
T 2faz_A 2 SMWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLF---YRGKQMEDGHTLFDYEVRLNDTIQLLVR 76 (78)
T ss_dssp CEEEEEEETTSSCEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTCBTTTTTCCTTCEEEEEEC
T ss_pred cEEEEEEECCCCEEEEEeccCCCCCHHHHHHHHHHHHCcChhhEEEE---ECCEECCCCCCHHHcCCCCCCEEEEEEe
Confidence 47899998 4777 4999 9999999999999999999999999999 9999999999999999999999998754
No 46
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=99.45 E-value=1.3e-13 Score=107.98 Aligned_cols=72 Identities=32% Similarity=0.499 Sum_probs=65.8
Q ss_pred EEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|.|.|+ ++|+.+.+++++++||++||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+...
T Consensus 10 ~~i~v~~~~G~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrL~---~~Gk~L~D~~tL~~~gi~~g~~i~l~~r~ 82 (88)
T 1sif_A 10 LQLFIKTLTGKTFTVEMEPSDTIENLKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRL 82 (88)
T ss_dssp CEEEEEETTSCEEEEECCTTSBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCTTSBSGGGTCCTTCEEEEEC--
T ss_pred eEEEEEeCCCCEEEEEECCCChHHHHHHHHHHHHCcChhhEEEE---ECCEECCCCCcHHHcCCCCCCEEEEEEeC
Confidence 556666 6899999999999999999999999999999999999 99999999999999999999999998654
No 47
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=99.45 E-value=1e-13 Score=107.11 Aligned_cols=72 Identities=24% Similarity=0.400 Sum_probs=67.1
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
+|.|.||+ .|+.+++++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+-.
T Consensus 3 ~m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~~ip~~~qrL~---~~g~~L~d~~tL~~~~i~~~~~i~l~~r 75 (85)
T 3n3k_B 3 HMRIVVKTLMGRTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIHNHSALYLLLK 75 (85)
T ss_dssp -CEEEEECGGGCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEE---ETBEECCTTCBTTTTTCCTTCEEEEEEC
T ss_pred eEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCCCHHHEEEE---ECCeECCCCCCHHHCCCCCCCEEEEEEe
Confidence 57899995 788999999999999999999999999999999999 9999999999999999999999998844
No 48
>1wx7_A Ubiquilin 3; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.45 E-value=2.2e-13 Score=110.44 Aligned_cols=75 Identities=24% Similarity=0.369 Sum_probs=69.9
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
+|.|+||+.+.++.|+|++++||.+||++|++.+|||+++|+|+ |+|+.|.|+.+|++++|++|++|+|+.....
T Consensus 17 ~m~I~Vk~~~g~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~gi~~g~~i~l~~~~~~ 91 (106)
T 1wx7_A 17 LIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLI---FAGKILKDPDSLAQCGVRDGLTVHLVIKRQH 91 (106)
T ss_dssp EEEEEEECSSCEEEEEEETTCCHHHHHHHHHHHHTCCTTTEEEE---ETTEECCTTSCHHHHTCCTTEEEEEEECCCC
T ss_pred eEEEEEEeCCCcEEEEECCCCcHHHHHHHHHHHHCcChhhEEEE---ECCEECCCcCcHHHcCCCCCCEEEEEEcCCC
Confidence 58999999766789999999999999999999999999999999 9999999999999999999999999976654
No 49
>3k9o_B Ubiquitin, UBB+1; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 2k25_A 2kx0_A
Probab=99.43 E-value=2.7e-13 Score=107.45 Aligned_cols=73 Identities=26% Similarity=0.419 Sum_probs=67.8
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
|.|.||+ .|+.|.|+|++++||.+||++|++.+|||+++|+|+ |+|+.|.|+.+|++++|++|++|+|+....
T Consensus 2 m~i~vk~~~g~~~~~~v~~~~TV~~LK~~i~~~~gip~~~qrL~---~~G~~L~d~~tL~~~~i~~~~~i~l~~r~~ 75 (96)
T 3k9o_B 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLR 75 (96)
T ss_dssp CEEEEEETTCCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBTGGGTCCTTCEEEEEECCC
T ss_pred cEEEEEeCCCCEEEEEECCCCCHHHHHHHHHhhhCCChhHEEEE---ECCEECCCCCcHHHcCCCCCCEEEEEEEcC
Confidence 5688996 688999999999999999999999999999999999 999999999999999999999999986543
No 50
>1j8c_A Ubiquitin-like protein hplic-2; ubiquitin-like domain, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.43 E-value=2.8e-13 Score=113.28 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=69.4
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
+|.|+||+.|+.+.|+|++++||.+||++|++.+|||+++|+|+ |+|+.|+|+.+|++++|++|++|+|+.....
T Consensus 32 ~m~I~Vk~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~dygI~~gstI~lv~~~~g 106 (125)
T 1j8c_A 32 IIKVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKSQTDQLVLI---FAGKILKDQDTLIQHGIHDGLTVHLVIKRDP 106 (125)
T ss_dssp CEEEEEECSSCEEEEEECTTCCHHHHHHHHHHHHCSCSSSEEEE---ETTEEESTTSCGGGTTCSSSEEEEEEEC---
T ss_pred cEEEEEEeCCeEEEEEECCCCcHHHHHHHHHHHHCcCcceEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEEeccCC
Confidence 59999999889999999999999999999999999999999999 9999999999999999999999999987655
No 51
>1wgd_A Homocysteine-responsive endoplasmic reticulum- resident ubiquitin-like domain member...; ENDPLASMIC reticulum stress, UBL domain; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.43 E-value=1.4e-13 Score=108.80 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=66.8
Q ss_pred eEEEEEEECCe---EEEEEeCCCCCHHHHHHHHHHHh--CCCccCeeeeccccCCCCCCCccccccc--cCCCCCEEEEE
Q psy11202 4 SLNLIIKWNSK---EYKTSLSKSNTVLELKQEILKQT--GVNPERQKLLNLKHAGKIPSDDTKLADT--NATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~g~---~~~i~v~~~~Tv~~LK~~I~~~t--gVp~~rQKLlgl~~kgk~l~D~~~L~~~--~l~~g~~i~l~ 76 (360)
+|.|+||+.++ .+.|++++++||.+||++|++.+ |+|+++|||+ |+|++|+|+.+|+++ +|++|++|+|+
T Consensus 7 ~m~i~Vk~~~~~~~~~~v~v~~~~TV~~lK~~I~~~~~~~i~~~~QrLi---~~Gk~L~D~~tL~~~~~~i~~~~~i~lv 83 (93)
T 1wgd_A 7 GVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLI---YSGKLLLDHQCLRDLLPKQEKRHVLHLV 83 (93)
T ss_dssp CCEEEEECSSSSCCCEEEECCTTSCHHHHHHHHHHHSTTCCCTTTCEEE---ETTEECCSSSCHHHHSCSSSCSEEEEEE
T ss_pred EEEEEEEeCCCCeEEEEEecCCCCcHHHHHHHHHHHhcCCCChHHeEEE---ECCEECcCcCCHHHHhcCCCCCCEEEEE
Confidence 58999998544 46677779999999999999999 9999999999 999999999999999 99999999998
Q ss_pred ccCcc
Q psy11202 77 GSLEQ 81 (360)
Q Consensus 77 gs~~~ 81 (360)
...-.
T Consensus 84 ~~~~g 88 (93)
T 1wgd_A 84 CNVKS 88 (93)
T ss_dssp CCCCC
T ss_pred eCCCC
Confidence 65543
No 52
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=99.42 E-value=3.5e-13 Score=110.31 Aligned_cols=72 Identities=25% Similarity=0.423 Sum_probs=68.2
Q ss_pred eEEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
+|.|+|| +.|+.|.|+|++++||.+||.+|++.+||||++|+|+ |+|+.|.|+.+|++++|++|++|+|+..
T Consensus 35 ~m~I~Vk~~~G~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~~~gI~~gs~I~l~~r 107 (111)
T 3vdz_A 35 AMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLR 107 (111)
T ss_dssp CEEEEEECSSSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBTTTTTCCTTCEEEEEEC
T ss_pred cEEEEEEeCCCCEEEEEeCCCCCHHHHHHHHHHHhCCChHHEEEE---ECCEECCCCCcHHHCCCCCCCEEEEEEe
Confidence 5899999 5889999999999999999999999999999999999 9999999999999999999999998854
No 53
>1wy8_A NP95-like ring finger protein, isoform A; ubiquitin-like domain, NP95/ICBP90-like ring finger (NIRF), ubiquitin ligase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=99.42 E-value=4.9e-13 Score=104.51 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=68.9
Q ss_pred ceEEEEEEE-CC-eEEEE-EeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 3 DSLNLIIKW-NS-KEYKT-SLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 3 ~~i~i~vk~-~g-~~~~i-~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
.+|.|.||+ .| +.+.+ +|++++||.+||++|++.+||||++|+|+ |+|+.+.|+.+|++++|++|++|+|+-..
T Consensus 6 ~~m~i~Vk~~~g~~~~~l~~v~~~~tV~~lK~~i~~~~gip~~~qrL~---~~gk~L~d~~tL~~~~i~~g~~i~l~~~~ 82 (89)
T 1wy8_A 6 SGMWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLF---YRGKQLENGYTLFDYDVGLNDIIQLLVRP 82 (89)
T ss_dssp SCEEEEEEETTCSCEEEEEEECTTCBHHHHHHHHHHHSCCCTTTEEEE---ETTEECCSSSBHHHHTCCTTCEEEEEECC
T ss_pred CcEEEEEEECCCCceEEEEecCCCCCHHHHHHHHHHHHCcChhhEEEE---ECCeECCCCCCHHHCCCCCCCEEEEEEeC
Confidence 358999998 46 68999 59999999999999999999999999999 99999999999999999999999998654
Q ss_pred cc
Q psy11202 80 EQ 81 (360)
Q Consensus 80 ~~ 81 (360)
..
T Consensus 83 ~g 84 (89)
T 1wy8_A 83 DS 84 (89)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 54
>1x1m_A Ubiquitin-like protein SB132; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.41 E-value=2.5e-13 Score=110.45 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=67.6
Q ss_pred EEEEEEECCe----EEEEEeCC---------CCCHHHHHHHHHHHh--CCCccC-eeeeccccCCCCCCCccccccccCC
Q psy11202 5 LNLIIKWNSK----EYKTSLSK---------SNTVLELKQEILKQT--GVNPER-QKLLNLKHAGKIPSDDTKLADTNAT 68 (360)
Q Consensus 5 i~i~vk~~g~----~~~i~v~~---------~~Tv~~LK~~I~~~t--gVp~~r-QKLlgl~~kgk~l~D~~~L~~~~l~ 68 (360)
|.|+|||.+. +|.|++++ ++||.+||++|++.+ |+|+++ |+|+ |+|+.|+|+.+|++++|+
T Consensus 13 ~~i~Vk~~~~~~~~~~~l~v~~~~~~~v~~~~~TV~~LK~~i~~~~~~gip~~~~qrLi---~~Gk~L~D~~tL~~y~i~ 89 (107)
T 1x1m_A 13 WHLAVKLADQPLAPKSILQLPETELGEYSLGGYSISFLKQLIAGKLQESVPDPELIDLI---YCGRKLKDDQTLDFYGIQ 89 (107)
T ss_dssp CCEEEEETTCTTSCCEEECCCCCSSCSSCCCCCBHHHHHHHHHHHCTTTCCCSSSEEEE---ETTEECCTTCBHHHHTCC
T ss_pred eEEEEEeCCCCCccEEEEEecCccccccCcccCCHHHHHHHHHHHhccCCChhhcEEEE---ECCeECCCCCcHHHcCCC
Confidence 8999999665 89999655 599999999999999 999999 9999 999999999999999999
Q ss_pred CCCEEEEEccCcc
Q psy11202 69 DGFKLMVMGSLEQ 81 (360)
Q Consensus 69 ~g~~i~l~gs~~~ 81 (360)
+|++|+|+.+...
T Consensus 90 ~g~~i~lv~~~~~ 102 (107)
T 1x1m_A 90 PGSTVHVLRKSWS 102 (107)
T ss_dssp TTCEEEEEESSCC
T ss_pred CCCEEEEEeCCCC
Confidence 9999999987643
No 55
>4ajy_B Transcription elongation factor B polypeptide 2; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 1lqb_A 1vcb_A 2c9w_B 2izv_B 2jz3_B 2xai_C 3dcg_A 3zrc_A* 3zrf_A 3ztc_A* 3ztd_A* 3zun_A* 1lm8_B 4b95_A* 2fnj_B 4b9k_A* 4awj_A*
Probab=99.40 E-value=1.1e-12 Score=107.79 Aligned_cols=74 Identities=20% Similarity=0.233 Sum_probs=68.8
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCC-------CCEEEEE
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATD-------GFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~-------g~~i~l~ 76 (360)
.+=|.|++++.++.+++.+++||.+||++|++.+||||++|+|+ |.|++|+|+.+|++|||++ +++|.|+
T Consensus 2 ~vFl~Ikr~ktTI~ldve~sdTV~~lK~kI~~~~giPp~qQrLI---~~Gk~LeD~kTL~dy~I~~~ta~~q~~atl~Lv 78 (118)
T 4ajy_B 2 DVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLY---KDDQLLDDGKTLGECGFTSQTARPQAPATVGLA 78 (118)
T ss_dssp EEEEEEEEBTEEEEEEEETTSBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBTTTTTCCGGGSBTTBCEEEEEE
T ss_pred ceEEEEecCCEEEEEEcCCCChHHHHHHHHHHHHCCCHHHeEEE---eCCeECCCcCCHHHcCCCcCcccCCCCCEEEEE
Confidence 46689999999999999999999999999999999999999999 9999999999999999999 9999998
Q ss_pred ccCc
Q psy11202 77 GSLE 80 (360)
Q Consensus 77 gs~~ 80 (360)
-..+
T Consensus 79 lr~~ 82 (118)
T 4ajy_B 79 FRAD 82 (118)
T ss_dssp ECCS
T ss_pred EecC
Confidence 4443
No 56
>2ojr_A Ubiquitin; lanthide-binding TAG, terbium, TB, SAD phasing, protein binding; 2.60A {Homo sapiens}
Probab=99.39 E-value=1e-12 Score=107.46 Aligned_cols=72 Identities=25% Similarity=0.410 Sum_probs=68.2
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
+|.|+||+ .|+.+.++|++++||.+||++|++.+|+|+++|+|+ |+|+.+.|+.+|++++|++|++|+|+..
T Consensus 35 ~m~I~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~~gI~~gs~I~l~~r 107 (111)
T 2ojr_A 35 AMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLR 107 (111)
T ss_dssp CEEEEEECSSSCEEEEEECTTCBHHHHHHHHHHHHCCCTTTEEEE---ETTEECCSSCBTTTTTCCTTCEEEEEEC
T ss_pred eEEEEEEcCCCCEEEEEeCCCCCHHHHHHHHHHHHCcCcccEEEE---ECCEECCCCCcHHHcCCCCCCEEEEEEe
Confidence 68999998 688999999999999999999999999999999999 9999999999999999999999998854
No 57
>2fnj_B Transcription elongation factor B polypeptide 2; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.15.1.1 PDB: 1lm8_B 1lqb_A 1vcb_A 2c9w_B 2izv_B 2jz3_B 2xai_C 3dcg_A 3zrc_A* 3zrf_A
Probab=99.38 E-value=1.1e-12 Score=108.11 Aligned_cols=75 Identities=21% Similarity=0.234 Sum_probs=69.2
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCC-------CCCEEEEE
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNAT-------DGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~-------~g~~i~l~ 76 (360)
.|-|.|++++.++.+++.+++||.+||++|++.+||||+.|+|+ |.|++|+|+.+|++|||+ .+++|.|+
T Consensus 2 ~mfl~ir~~ktti~lev~~sdTV~~lK~kI~~~egIP~~qQrLi---~~Gk~LeD~~TLsdy~I~~~~a~~q~~stL~L~ 78 (118)
T 2fnj_B 2 DVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPEEQRLY---KDDQLLDDGKTLGECGFTSQTARPQAPATVGLA 78 (118)
T ss_dssp EEEEEEEEBTEEEEEEEETTSBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBHHHHTCCTTTSBTTBCEEEEEE
T ss_pred cEEEEEecCCEEEEEEeCCcChHHHHHHHHHHHhCCCHHHeEEE---ECCeECCCCCCHHHcCcccccccCCCCCEEEEE
Confidence 57888899888899999999999999999999999999999999 999999999999999999 69999988
Q ss_pred ccCcc
Q psy11202 77 GSLEQ 81 (360)
Q Consensus 77 gs~~~ 81 (360)
...++
T Consensus 79 lr~~g 83 (118)
T 2fnj_B 79 FRADD 83 (118)
T ss_dssp EBSSS
T ss_pred ecCCC
Confidence 76443
No 58
>3b1l_X E3 ubiquitin-protein ligase parkin; proteasome, ALFA-beta-protein; 1.85A {Mus musculus} PDB: 1mg8_A 2zeq_A 2knb_A 1iyf_A
Probab=99.08 E-value=3.6e-14 Score=107.56 Aligned_cols=71 Identities=15% Similarity=0.363 Sum_probs=65.9
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
|.|.||+ .|+++.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|+++|+++|++|+|+..
T Consensus 1 M~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gi~~~~qrL~---~~gk~L~d~~tL~~~~i~~g~~i~l~~r 72 (76)
T 3b1l_X 1 MIVFVRFNSSYGFPVEVDSDTSILQLKEVVAKQQGVPADQLRVI---FAGKELPNHLTVQNCDLEQQSIVHIVQR 72 (76)
Confidence 4588887 688899999999999999999999999999999999 9999999999999999999999998754
No 59
>1v6e_A Cytoskeleton-associated protein 1; tubulin-specific chaperone B, tubulin folding cofactor B, microtubule, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.38 E-value=1.2e-12 Score=103.95 Aligned_cols=74 Identities=20% Similarity=0.235 Sum_probs=66.5
Q ss_pred eEEEEEEECCe--EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCC---CC----CCCccccccccCCCCCEEE
Q psy11202 4 SLNLIIKWNSK--EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAG---KI----PSDDTKLADTNATDGFKLM 74 (360)
Q Consensus 4 ~i~i~vk~~g~--~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kg---k~----l~D~~~L~~~~l~~g~~i~ 74 (360)
+|+|.|++++. .+++++++++||.+||++|+..+||||++|+|+ |.| +. ++|+.+|+++||++|++|+
T Consensus 7 ~v~l~I~~~~~~~~~~~~v~~~~TV~~lK~ki~~~~gip~~~qrL~---~~~~~g~~~~~l~~D~~tL~~y~i~~g~~l~ 83 (95)
T 1v6e_A 7 GVMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELE---LYGADDKFYSKLDQEDALLGSYPVDDGCRIH 83 (95)
T ss_dssp CEEEEEEETTSSSCEEEEECTTSBHHHHHHHHHHHTCSCTTTCBCE---EECSSSCEEEECCCSSSBTTSSSCCTTCEEE
T ss_pred EEEEEEEECCCCeeEEEEcCccCHHHHHHHHHHHHHCCCHHHeEEE---EeCCCCccccccCCCcCCHhHCCCCCCCEEE
Confidence 59999999887 689999999999999999999999999999999 765 43 5788999999999999999
Q ss_pred EEccCc
Q psy11202 75 VMGSLE 80 (360)
Q Consensus 75 l~gs~~ 80 (360)
|+.+..
T Consensus 84 v~d~~P 89 (95)
T 1v6e_A 84 VIDHSG 89 (95)
T ss_dssp EBCCSC
T ss_pred EEECCc
Confidence 987543
No 60
>2uyz_B Small ubiquitin-related modifier 1; sumoylation, cell division, nuclear protein, ubiquitin-like modifier, UBL conjugation pathway; 1.4A {Homo sapiens} SCOP: d.15.1.1 PDB: 2vrr_B 2iy0_B 2iy1_B 2g4d_B 2las_A 2io2_B 1z5s_B 3uip_B* 1tgz_B* 2bf8_B
Probab=99.38 E-value=7.7e-13 Score=101.05 Aligned_cols=74 Identities=16% Similarity=0.207 Sum_probs=69.1
Q ss_pred CCceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 1 MGDSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 1 m~~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
|. .|.|.||. .|+++.++|++++||.+||++|++.+|+||++|+|+ |.|+.+.|+.+|+++++++|++|.|+-.
T Consensus 1 m~-~m~i~vk~~~g~~~~~~v~~~~tv~~lk~~i~~~~gi~~~~qrL~---~~G~~L~d~~tl~~~~i~~~~~i~l~~~ 75 (79)
T 2uyz_B 1 ME-YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFL---FEGQRIADNHTPKELGMEEEDVIEVYQE 75 (79)
T ss_dssp CC-EEEEEEECTTCCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTCCHHHHTCCTTEEEEEEEC
T ss_pred CC-eEEEEEECCCCCEEEEEECCCChHHHHHHHHHHHHCCCcccEEEE---ECCEEeCCCCCHHHcCCCCCCEEEEEEe
Confidence 54 79999996 688999999999999999999999999999999999 9999999999999999999999998754
No 61
>1we6_A Splicing factor, putative; structural genomics, ubiquitin-like domain, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.15.1.1
Probab=99.37 E-value=1.1e-12 Score=107.14 Aligned_cols=73 Identities=19% Similarity=0.184 Sum_probs=67.9
Q ss_pred eEEEEEEE----CCeEEEEEeCC-CCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW----NSKEYKTSLSK-SNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~----~g~~~~i~v~~-~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|.|.|++ .|+.+.++|++ ++||.+||++|++.+||||++|+|+ |+|+++.|+.+|++++|++|++|+|+-.
T Consensus 27 ~i~i~Vk~~~~~~g~~~~l~v~~l~~TV~~LK~~I~~~~gip~~~QrL~---~~Gk~L~D~~tL~~y~I~~g~~l~l~~r 103 (111)
T 1we6_A 27 PATIRVSKPNENDGQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLS---GKAGFLKDNMSLAHYNVGAGEILTLSLR 103 (111)
T ss_dssp CEEEEECCTTCSSSCCEEEEESCSSSBHHHHHHHHHHHTTCCTTTSEEE---CSSSBCCTTSBTTTTTCSSSCEEEEECS
T ss_pred cEEEEEEecccCCCcEEEEEecCCCCcHHHHHHHHHHHHCCCHHHeEEE---ECCEECCCCCcHHHCCCCCCCEEEEEEE
Confidence 48899997 57889999998 9999999999999999999999999 9999999999999999999999999854
Q ss_pred C
Q psy11202 79 L 79 (360)
Q Consensus 79 ~ 79 (360)
.
T Consensus 104 ~ 104 (111)
T 1we6_A 104 E 104 (111)
T ss_dssp S
T ss_pred c
Confidence 3
No 62
>3rt3_B Ubiquitin-like protein ISG15; ubiquitin-like domain, isgylation, antiviral protein-viral P complex; 2.01A {Homo sapiens} PDB: 3sdl_C 3r66_C 3pse_B 1z2m_A
Probab=99.36 E-value=1.4e-12 Score=112.86 Aligned_cols=74 Identities=30% Similarity=0.407 Sum_probs=68.2
Q ss_pred eEEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeecccc-CCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 4 SLNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKH-AGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 4 ~i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~-kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
+|.|+|| ++|+.+++++++++||.+||++|++.+||||++|+|+. | +|+.++|+.+|++++|++|++|+|+.+.
T Consensus 2 ~m~i~vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~QrL~~--~~~g~~L~d~~tL~~y~i~~~~~l~l~~~~ 77 (159)
T 3rt3_B 2 GWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAV--HPSGVALQDRVPLASQGLGPGSTVLLVVDK 77 (159)
T ss_dssp -CEEEEEETTSCEEEEECCTTCCHHHHHHHHHHHHCCCGGGEEEEE--ETTCCBCCTTSCGGGGTCCTTCEEEEEECC
T ss_pred ceEEEEEECCCCEEEEEeCCCCcHHHHHHHHHHHhCCCHHHEEEEE--cCCCCCCCCCCCHHHcCCCCCCEEEEEccC
Confidence 3678899 68999999999999999999999999999999999984 5 6999999999999999999999999873
No 63
>1t0y_A Tubulin folding cofactor B; ubiquitin-like, cytoskeleton, microtubule, CESG, structural genomics, protein structure initiative, PSI; NMR {Caenorhabditis elegans} SCOP: d.15.1.1
Probab=99.36 E-value=1.5e-12 Score=108.39 Aligned_cols=76 Identities=14% Similarity=0.270 Sum_probs=68.4
Q ss_pred CCceEEEEEEECCe--EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCC---C----CCCCccccccccCCCCC
Q psy11202 1 MGDSLNLIIKWNSK--EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAG---K----IPSDDTKLADTNATDGF 71 (360)
Q Consensus 1 m~~~i~i~vk~~g~--~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kg---k----~l~D~~~L~~~~l~~g~ 71 (360)
|+++|+|.|++++. .+++++++++||++||++|+..+||||++|+|+ +.| + +++|+.+|+++||.+|+
T Consensus 3 m~~~v~l~V~~~~~~~~~e~~v~~~~TV~~lK~ki~~~~Gip~~~qrL~---~~g~~~~~~~~l~~D~~tL~~y~i~~g~ 79 (122)
T 1t0y_A 3 MTEVYDLEITTNATDFPMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQ---LFDGDDQLKGELTDGAKSLKDLGVRDGY 79 (122)
T ss_dssp CCCEEEEEEEESSCCSCEEEEEETTSBHHHHHHHHHHHHCCCTTTEEEE---EECSSSSEEEECCCCSSBTTTTTCCSSE
T ss_pred CCCEEEEEEEECCCCccEEEEeCCCCcHHHHHHHHHHHhCCCHHHeEEE---EecCCCccccccCCCcCCHHHCCCCCCC
Confidence 77789999999877 689999999999999999999999999999999 766 4 24788999999999999
Q ss_pred EEEEEccC
Q psy11202 72 KLMVMGSL 79 (360)
Q Consensus 72 ~i~l~gs~ 79 (360)
+|+|+.+.
T Consensus 80 ~ihvvd~~ 87 (122)
T 1t0y_A 80 RIHAVDVT 87 (122)
T ss_dssp EEEEEECT
T ss_pred EEEEEeCC
Confidence 99998644
No 64
>2kdi_A Ubiquitin, vacuolar protein sorting-associated protein 27 fusion protein; ubiquitin interacting motif, UIM, protein domain interface; NMR {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.3e-12 Score=107.47 Aligned_cols=75 Identities=25% Similarity=0.389 Sum_probs=69.4
Q ss_pred eEEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 4 SLNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 4 ~i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+.|.|+ +.|+.+.+++++++||.+||++|++.+||||++|+|+ |+|+.|.|+.+|++++|++|++|+|+.....
T Consensus 9 ~~~i~vk~l~G~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi---~~Gk~L~D~~tL~~ygI~~gstI~l~~~~~G 84 (114)
T 2kdi_A 9 EFQIFAKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI---WAGKQLEDGRTLSDYNIQRESTLHLVLRLRG 84 (114)
T ss_dssp CCEEEEEETTCCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTCBTTTTTCCSSCEEEEEECCCS
T ss_pred cEEEEEEeCCCcEEEEEECCCCcHHHHHHHHHHHHCcChHHEEEE---ECCEECCCCCcHHHCCCCCCCEEEEEEEcCC
Confidence 3678888 5889999999999999999999999999999999999 9999999999999999999999999977654
No 65
>3u30_A Ubiquitin, linear DI-ubiquitin; immune system; 2.43A {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=113.67 Aligned_cols=75 Identities=25% Similarity=0.415 Sum_probs=70.6
Q ss_pred eEEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 4 SLNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 4 ~i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
+|.|.|| ++|+++.++|++++||.+||++|++.+||||++|+|+ |+|+.++|+.+|++++|++|++|+|+.....
T Consensus 20 ~m~i~Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~QrL~---~~g~~L~d~~tL~~~~i~~~~~l~l~~~~~g 95 (172)
T 3u30_A 20 HMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 95 (172)
T ss_dssp CEEEEEEETTTEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTCBTGGGTCCTTCEEEEEECCCC
T ss_pred cEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcChHHEEEE---ECCccccccCCHhHcCCcccceeeeeecccc
Confidence 5899999 7899999999999999999999999999999999999 9999999999999999999999999976543
No 66
>2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=9e-13 Score=107.82 Aligned_cols=75 Identities=13% Similarity=0.069 Sum_probs=67.2
Q ss_pred eEEEEEE--ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc-cCc
Q psy11202 4 SLNLIIK--WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG-SLE 80 (360)
Q Consensus 4 ~i~i~vk--~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g-s~~ 80 (360)
.++|+|+ ..+++++|++++++||.+||++|++..++|+++|+|+ |+|+.|+|+.+|+++||++|.+|+|+- ++.
T Consensus 15 ~itvkv~l~~~~~k~tv~v~~d~TV~dLKe~ls~~~~iP~e~qrLI---y~GKiLKD~eTL~~~gIk~g~TIhLvi~s~~ 91 (118)
T 2daf_A 15 LATVKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIR---YSGKILKNNETLVQHGVKPQEIVQVEIFSTN 91 (118)
T ss_dssp CEEEEEEETTTCCEEEEEECSSSCSHHHHHHHHHHHTCCTTTEEEE---ETTEEECSSCCHHHHSCCSSCEEEEEEEESC
T ss_pred cEEEEEEEcCCCcEEEEEeCCCCcHHHHHHHHHhhhCCChHHEEEE---ECCeEcCCcchHHHcCCCCCCEEEEEEecCC
Confidence 3777776 3578899999999999999999999999999999999 999999999999999999999998764 444
Q ss_pred c
Q psy11202 81 Q 81 (360)
Q Consensus 81 ~ 81 (360)
.
T Consensus 92 p 92 (118)
T 2daf_A 92 P 92 (118)
T ss_dssp T
T ss_pred C
Confidence 4
No 67
>2kjr_A CG11242; UBL, ubiquitin, ubiquitin-like, structural genomics, PSI-2, protein structure initiative; NMR {Drosophila melanogaster}
Probab=99.33 E-value=2.9e-12 Score=102.02 Aligned_cols=70 Identities=21% Similarity=0.296 Sum_probs=62.6
Q ss_pred eEEEEEEECCe---EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccC--CC----CCCCccccccccCCCCCEEE
Q psy11202 4 SLNLIIKWNSK---EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHA--GK----IPSDDTKLADTNATDGFKLM 74 (360)
Q Consensus 4 ~i~i~vk~~g~---~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~k--gk----~l~D~~~L~~~~l~~g~~i~ 74 (360)
.|+|.|++... .++++++++.||++||++|+..+||||++|+|+ |. |+ +++|+.+|++++|++|++|+
T Consensus 15 ~v~l~It~s~~~~~~~~~~v~~~~TV~~LK~kI~~~~GiP~~~QrL~---~~~~g~~~~~L~~D~~tL~~Y~i~~gstih 91 (95)
T 2kjr_A 15 FIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQ---VFKGDTCVSTMDNNDAQLGYYANSDGLRLH 91 (95)
T ss_dssp EEEEEEEESSCSCEEEEEEEETTCBHHHHHHHHHHHHCSCTTTEEEE---EEETTEEEEECCCTTSBHHHHCCSSSCEEE
T ss_pred eEEEEEEECCCCceEEEEEeCccCHHHHHHHHHHHHHCcCHHHeEEE---EecCCcccceeCCCCCCHhHCCcCCCCEEE
Confidence 58999998543 789999999999999999999999999999999 76 44 35888999999999999999
Q ss_pred EE
Q psy11202 75 VM 76 (360)
Q Consensus 75 l~ 76 (360)
|+
T Consensus 92 lv 93 (95)
T 2kjr_A 92 VV 93 (95)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 68
>4b6w_A Tubulin-specific chaperone; CAP-Gly, ubiquitin-like; HET: MSE; 2.35A {Trypanosoma brucei brucei strain 927}
Probab=99.31 E-value=5.5e-12 Score=98.56 Aligned_cols=72 Identities=15% Similarity=0.226 Sum_probs=64.0
Q ss_pred eEEEEEEEC---CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeecccc-------CCCCCCCccccccccCCCCCEE
Q psy11202 4 SLNLIIKWN---SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKH-------AGKIPSDDTKLADTNATDGFKL 73 (360)
Q Consensus 4 ~i~i~vk~~---g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~-------kgk~l~D~~~L~~~~l~~g~~i 73 (360)
.|+|.|.|+ ...+++.++++.||.+||++|+..+|+||+.|+|+ | .|++++|+.+|++++|++|++|
T Consensus 2 ~V~v~iths~~~~~~~E~r~~~s~TI~~lK~ki~~~~Gip~~~QrLi---~~~~~~~~~g~~l~d~~tL~~Y~i~~g~~i 78 (86)
T 4b6w_A 2 VVKVSLTHSASRMRVPEKRYGLAQTIESIKENVFTHFATPPEYMQLQ---LIDDRGITIEKNMANDKQLGYYQCRDEFVI 78 (86)
T ss_dssp EEEEEEEETTCSCCEEEEEEETTSBHHHHHHHHHTTSCCCGGGEEEE---EECTTSCEEESSCCTTSBGGGGTCCTTCEE
T ss_pred EEEEEEEEcCCCCeEEEEEcCccCcHHHHHHHHHHHHCCCHHHEEEE---EecCCCCceeeEcCCCCCHHHCCCCCCCEE
Confidence 578888874 34578999999999999999999999999999999 5 3789999999999999999999
Q ss_pred EEEcc
Q psy11202 74 MVMGS 78 (360)
Q Consensus 74 ~l~gs 78 (360)
+|+-+
T Consensus 79 hlvd~ 83 (86)
T 4b6w_A 79 HVVDL 83 (86)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99843
No 69
>1we7_A SF3A1 protein; structural genomics, ubiquitin-like domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 1zkh_A
Probab=99.30 E-value=4e-12 Score=104.56 Aligned_cols=73 Identities=21% Similarity=0.224 Sum_probs=66.8
Q ss_pred eEEEEEEEC-----------CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCE
Q psy11202 4 SLNLIIKWN-----------SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFK 72 (360)
Q Consensus 4 ~i~i~vk~~-----------g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~ 72 (360)
.|+|.|+.. |+.+.++|++++||.+||++|++.+||||++|+|+ |+|+.+.|+.+|++++|++|++
T Consensus 25 ~i~l~V~~p~~~~~~~~~L~G~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrL~---~~Gk~L~D~~tL~~y~i~~g~~ 101 (115)
T 1we7_A 25 PVSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQ---YEGIFIKDSNSLAYYNMASGAV 101 (115)
T ss_dssp CEEEEEEECCCSSSCSSCCSSEEEEEEECSCSBTHHHHHHHHHHSSCCTTTEEEE---ETTEEECTTSBHHHHTCCSSCE
T ss_pred CEEEEEEcCCCccccccccCCeEEEEEECCCCCHHHHHHHHHHHHCCChHHEEEE---ECCEECCCCCCHHHCCCCCCCE
Confidence 478888873 67899999999999999999999999999999999 9999999999999999999999
Q ss_pred EEEEccC
Q psy11202 73 LMVMGSL 79 (360)
Q Consensus 73 i~l~gs~ 79 (360)
|+|+-..
T Consensus 102 i~lv~rl 108 (115)
T 1we7_A 102 IHLALKE 108 (115)
T ss_dssp EEEEECC
T ss_pred EEEEEEc
Confidence 9987543
No 70
>2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.30 E-value=5.9e-12 Score=100.57 Aligned_cols=73 Identities=22% Similarity=0.275 Sum_probs=64.4
Q ss_pred ceEEEEEEECCe---EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCC---CC----CCCccccccccCCCCCE
Q psy11202 3 DSLNLIIKWNSK---EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAG---KI----PSDDTKLADTNATDGFK 72 (360)
Q Consensus 3 ~~i~i~vk~~g~---~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kg---k~----l~D~~~L~~~~l~~g~~ 72 (360)
+.|+|.|+++.. .++++++++.||++||++|+..+||||+.|+|+ |.| +. ++|+.+|++++|++|++
T Consensus 13 ~~v~l~It~s~~~~~~~e~~v~~~~TV~~LK~kIe~~~Gip~~~QrLi---~~g~~g~~~~~L~~D~~tL~~Y~I~~g~~ 89 (97)
T 2kj6_A 13 DSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALE---LYDDSGSKVAVLSDDSRPLGFFSPFDGFR 89 (97)
T ss_dssp CCEEEEEEETTSSCCCEEEEECTTCCHHHHHHHHHHHHCCCTTSEEEE---EECSSSCBCCCSSGGGSCHHHHCCCSCCE
T ss_pred ceEEEEEEECCCCceEEEEEeCCCChHHHHHHHHHHHHCcCHHHeEEE---EecCCCcccceecCCcCCHHHCCCCCCCE
Confidence 358999998533 689999999999999999999999999999999 776 33 57888999999999999
Q ss_pred EEEEcc
Q psy11202 73 LMVMGS 78 (360)
Q Consensus 73 i~l~gs 78 (360)
|+|+.+
T Consensus 90 Ihlvd~ 95 (97)
T 2kj6_A 90 LHIIDL 95 (97)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 999865
No 71
>3q3f_A Ribonuclease/ubiquitin chimeric protein; domain SWAP, oligomerization, ubiquitin insertion, hydrolase binding; 2.17A {Bacillus amyloliquefaciens}
Probab=99.28 E-value=6.2e-12 Score=112.14 Aligned_cols=73 Identities=26% Similarity=0.387 Sum_probs=68.8
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
|.|.||. .|++++|+|++++||.+||++|++.+||||++|+|+ |+|+.|+|+.+|++++|++|++|+|+....
T Consensus 106 MqI~VKtl~Gkt~~l~V~~s~TV~~LK~kI~~~~gIp~~~QrLi---~~Gk~L~D~~tL~dygI~~gstI~Lvlrlr 179 (189)
T 3q3f_A 106 GQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLR 179 (189)
T ss_dssp EEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCCEE---ETTEECCTTCBGGGGTCCTTCEEEECCCCC
T ss_pred eeeeeecCCCCEEEEEeCCCCcHHHHHHHHHhccCCCHHHEEEE---ECCEECCCCCCHHHCCCCCCCEEEEEEEcC
Confidence 7899997 689999999999999999999999999999999999 999999999999999999999999986543
No 72
>3b08_A Polyubiquitin-C, ubiquitin; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Homo sapiens} PDB: 2w9n_A* 3b0a_A* 3axc_A 2zvn_A 2zvo_A 2y5b_B
Probab=99.28 E-value=7.9e-12 Score=106.59 Aligned_cols=74 Identities=26% Similarity=0.409 Sum_probs=68.6
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
|.|.||+ .|+.+++++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|+++|+++|++|+|+.....
T Consensus 1 M~i~vk~~~g~~~~~~v~~~~tv~~lK~~i~~~~gip~~~q~L~---~~g~~L~d~~tL~~~~i~~~~~l~l~~~~~~ 75 (152)
T 3b08_A 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75 (152)
T ss_dssp CEEEEEETTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBTGGGTCCTTCEEEEEECCTT
T ss_pred CEEEEEeCCCCEEEEEECCCCCHHHHHHHHHHHHCcChHHeEEE---ECCeECcCcccHHHhccCCCCeeEEEeeccc
Confidence 4588986 688999999999999999999999999999999999 9999999999999999999999999987654
No 73
>3l0w_B Monoubiquitinated proliferating cell nuclear antigen, proliferating cell nuclear antigen; replication, DNA damage, DNA repair; 2.80A {Saccharomyces cerevisiae} PDB: 3l10_B
Probab=99.28 E-value=8.5e-12 Score=109.52 Aligned_cols=72 Identities=26% Similarity=0.423 Sum_probs=66.9
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|.|.||. .|+.+.++|++++||.+||++|++.+|+||++|+|+ |+|+.|.|+.+|++++|++|++|+|+...
T Consensus 1 MqI~Vk~~~Gk~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~~y~I~~gstI~Lvlrl 73 (169)
T 3l0w_B 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRL 73 (169)
T ss_dssp CEEEEEETTSCEEEEECCTTCBHHHHHHHHHHHHCCCTTTEEEE---ETTEECCTTSBGGGGTCCTTCEEEEEECC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCHHHHHHHHHHHHCcCHHHEEEE---ECCccccCcCcHHHcCCCCCCEEEEEEEe
Confidence 3588887 688999999999999999999999999999999999 99999999999999999999999998554
No 74
>4dbg_A Ranbp-type and C3HC4-type zinc finger-containing; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens} PDB: 2lgy_A
Probab=99.26 E-value=1.6e-11 Score=99.16 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=62.9
Q ss_pred eEEEEEEEC---CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccC-CCCCEEEEE
Q psy11202 4 SLNLIIKWN---SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNA-TDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~---g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l-~~g~~i~l~ 76 (360)
.+.|+|+-. +..++++|++++||++||++|++..|+||++|||+ ++|++++|+.+|+++|| .+|++++|+
T Consensus 24 ~l~v~v~d~~s~~~~i~l~V~ps~TV~~LK~~I~~k~Gipp~~QRli---~ggkll~D~~TL~~ygI~~~G~t~hL~ 97 (105)
T 4dbg_A 24 RLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWV---IGQRLARDQETLHSHGVRQNGDSAYLY 97 (105)
T ss_dssp EEEEEEEESSSCCEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEEECTTCBTGGGTCCSTTCEEEEE
T ss_pred EEEEEEEccCCCCceEEEEECCcChHHHHHHHHHHHhCCCHHHEEEe---ccCeEccCcCcHHHcCCCCCCCEEEEE
Confidence 367777753 37899999999999999999999999999999999 89999999999999999 599999876
No 75
>1wyw_B Ubiquitin-like protein SMT3C; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 1y8r_C* 2asq_A 2pe6_B 1a5r_A 2kqs_A 3kyc_D* 3rzw_C
Probab=99.26 E-value=8.9e-12 Score=99.35 Aligned_cols=72 Identities=15% Similarity=0.196 Sum_probs=67.8
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|.|.||. .|+++.++|.+++||.+||++|++.+|||+++|+|+ |.|+.|.|+.+|++|+|++|++|.|+-.
T Consensus 21 ~m~I~Vk~~~g~~~~l~v~~~~tv~~lK~~i~~~~gip~~~qrLi---f~Gk~L~d~~tl~dy~i~~g~~I~l~~~ 93 (97)
T 1wyw_B 21 YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFL---FEGQRIADNHTPKELGMEEEDVIEVYQE 93 (97)
T ss_dssp EEEEEEECTTCCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTCCHHHHTCCTTCEEEEEES
T ss_pred cEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCCChhhEEEE---ECCeEcCCCCCHHHCCCCCCCEEEEEEe
Confidence 48999996 688899999999999999999999999999999999 9999999999999999999999998754
No 76
>1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.26 E-value=2.7e-12 Score=103.90 Aligned_cols=74 Identities=22% Similarity=0.283 Sum_probs=66.1
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccC---------------eeeeccccCCCCCC-Ccccccccc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPER---------------QKLLNLKHAGKIPS-DDTKLADTN 66 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~r---------------QKLlgl~~kgk~l~-D~~~L~~~~ 66 (360)
.|+|+||. .|++++|+|++++||.+||++|++.+|+||.+ |+|+ |.|+.|. |+.+|+++|
T Consensus 7 ~M~I~Vk~l~g~~~~v~V~~~~TV~dLK~~I~~~~~i~~~~q~g~~~isw~~~w~q~~Li---~~Gk~L~dD~~tL~dyg 83 (105)
T 1v2y_A 7 GMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLT---SAGEKLTEDRKKLRDYG 83 (105)
T ss_dssp SEEEEEECSSSCEEEEEECTTCBHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHTTEEEE---SSSCEECCSSSBHHHHT
T ss_pred cEEEEEEecCCCEEEEEECCCChHHHHHHHHHHHhCCCcccccCcceeeeeecceeEEEE---eCCcCccCCcCCHHHcC
Confidence 48999984 89999999999999999999999999999954 5999 9999986 568999999
Q ss_pred CCCCCEEEEEccCc
Q psy11202 67 ATDGFKLMVMGSLE 80 (360)
Q Consensus 67 l~~g~~i~l~gs~~ 80 (360)
|++|++|+||-..-
T Consensus 84 I~~g~~l~lv~~lr 97 (105)
T 1v2y_A 84 IRNRDEVSFIKKLG 97 (105)
T ss_dssp CCSSEEEEEEECSC
T ss_pred CCCCCEEEEEehhc
Confidence 99999999986543
No 77
>2kdb_A Homocysteine-responsive endoplasmic reticulum- resident ubiquitin-like domain member...; UBL domain, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=99.26 E-value=4e-12 Score=101.91 Aligned_cols=70 Identities=23% Similarity=0.250 Sum_probs=62.2
Q ss_pred eEEEEEEEC-Ce--EEEEEeCCCCCHHHHHHHHHHH-hCCCc-cCeeeeccccCCCCCCCccccccc--cCCCCCEEEEE
Q psy11202 4 SLNLIIKWN-SK--EYKTSLSKSNTVLELKQEILKQ-TGVNP-ERQKLLNLKHAGKIPSDDTKLADT--NATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~-g~--~~~i~v~~~~Tv~~LK~~I~~~-tgVp~-~rQKLlgl~~kgk~l~D~~~L~~~--~l~~g~~i~l~ 76 (360)
.|.|+||+. ++ .++|++++++||.+||++|++. +|+|| ++|||+ |+|++|+|+.+|+++ +|++|++|+|+
T Consensus 23 ~m~I~VK~~~g~~~~i~l~v~~~~TV~~LK~~I~~~~~g~pp~~~QrLI---y~Gk~L~D~~tL~~y~~~I~~~~tihLv 99 (99)
T 2kdb_A 23 PVTLIIKAPNQKYSDQTISCFLNWTVGKLKTHLSNVYPSKPLTKDQRLV---YSGRLLPDHLQLKDILRKQDEYHMVHLV 99 (99)
T ss_dssp CEEEEEECTTSSSCCEEEEECTTSBHHHHHHHHHHHSTTCCCTTTCCEE---ETTEEECTTSBTHHHHTTTCSEEEEEEC
T ss_pred eEEEEEEcCCCCEEEEEEEcCCCCHHHHHHHHHHHHhcCCCChhhEEEE---ECCEECCCCCCHHHHhcCCCCCCEEEeC
Confidence 489999984 44 4688899999999999999986 57665 999999 999999999999999 99999999875
No 78
>3rt3_B Ubiquitin-like protein ISG15; ubiquitin-like domain, isgylation, antiviral protein-viral P complex; 2.01A {Homo sapiens} PDB: 3sdl_C 3r66_C 3pse_B 1z2m_A
Probab=99.26 E-value=1.3e-11 Score=106.61 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=68.3
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
.|.|.||. .|+++.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+...
T Consensus 81 ~m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~q~L~---~~G~~L~d~~tL~~y~i~~g~~l~l~~rl 154 (159)
T 3rt3_B 81 PLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLT---FEGKPLEDQLPLGEYGLKPLSTVFMNLRL 154 (159)
T ss_dssp CEEEEEECTTSCEEEEEECTTSBHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTSBGGGGTCCTTCEEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCHHHEEEE---ECCeecCCCCCHHHcCCCCCCEEEEEEec
Confidence 47889997 689999999999999999999999999999999999 99999999999999999999999998643
No 79
>1wia_A Hypothetical ubiquitin-like protein (riken cDNA 2010008E23); 'structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.26 E-value=1.1e-11 Score=98.21 Aligned_cols=72 Identities=22% Similarity=0.271 Sum_probs=67.1
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCc-cccccccCCCCCEEEEEccCcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDD-TKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~-~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
+|.|.||+ .|+.+.++|++++||.+||++|++.+ +++|+|+ |+|+.|.|+ .+|++++|++|++|+|+.+...
T Consensus 7 ~m~i~Vk~~~g~~~~~~v~~~~TV~~LK~~i~~~~---~~~qrLi---~~Gk~L~D~~~tL~~y~i~~g~~i~l~~~~~~ 80 (95)
T 1wia_A 7 GINVRLKFLNDTEELAVARPEDTVGTLKSKYFPGQ---ESQMKLI---YQGRLLQDPARTLSSLNITNNCVIHCHRSPPG 80 (95)
T ss_dssp SEEEEEEETTTEEEEEEECSSSBHHHHHHHHSSST---TTTCEEE---ETTEECCCSSCBTTTTTCCTTEEEEEECCCCC
T ss_pred eEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHhhC---cCcEEEE---ECCEEccCCcCCHHHcCCCCCCEEEEEECCCC
Confidence 58999997 68899999999999999999999998 9999999 999999999 9999999999999999987654
No 80
>3u5e_m 60S ribosomal protein L40; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_m 4b6a_m 4a18_K 4a19_K 4a1b_K 4a1d_K 4adx_5 3izc_p 3izs_p 3iz5_p 3izr_p
Probab=99.26 E-value=5.1e-13 Score=112.01 Aligned_cols=74 Identities=26% Similarity=0.409 Sum_probs=0.0
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
|.|.|++ .|++++|+|++++||.+||++|++.+||||++|+|+ |+|+.+.|+.+|+++||++|++|+|+....+
T Consensus 1 M~I~Vk~~~G~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~~~~I~~gsti~l~~rl~G 75 (128)
T 3u5e_m 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75 (128)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CEEEEEeCCCCEEEEEeCCCCCHHHHHHHHHHHhCcChHHEEEE---ECCEECCCCCchhhhccCCCCEEEEEEEcCC
Confidence 4578887 688999999999999999999999999999999999 9999999999999999999999998866544
No 81
>2kzr_A Ubiquitin thioesterase OTU1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, hydrolase; NMR {Mus musculus}
Probab=99.25 E-value=1.3e-11 Score=96.25 Aligned_cols=76 Identities=22% Similarity=0.204 Sum_probs=64.7
Q ss_pred EEEEEEECCeEEEEE-eCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCC---CccccccccCCCCCEEEEEccCc
Q psy11202 5 LNLIIKWNSKEYKTS-LSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPS---DDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 5 i~i~vk~~g~~~~i~-v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~---D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
|.|.|+|.+.++.|+ +++++||.+||++|++.+||||++|+|+.. +.++.+. |+.+|+++||++|++|+|..+..
T Consensus 1 m~i~vr~~~G~~~v~~l~~~~Tv~~Lk~~I~~~~gi~~~~qrL~~~-~p~k~l~l~~~~~tL~~~gl~~g~~l~v~~~~~ 79 (86)
T 2kzr_A 1 WRVRCKAKGGTHLLQGLSSRTRLRELQGQIAAITGIAPGSQRILVG-YPPECLDLSDRDITLGDLPIQSGDMLIVEEDQT 79 (86)
T ss_dssp CCEEEEETTEEEEECSCCTTCBHHHHHHHHHHHTCCCTTTCCCEES-SCCCCCCCCCSSCBTTTSSCCTTCEEECCCCSC
T ss_pred CEEEEEcCCCCEEeeecCCCCCHHHHHHHHHHHhCCCccceEEEeC-CCCcccccCCCCCCHHHcCCCCCCEEEEEeCCC
Confidence 358999988888898 999999999999999999999999999821 3457764 67899999999999999886654
Q ss_pred c
Q psy11202 81 Q 81 (360)
Q Consensus 81 ~ 81 (360)
.
T Consensus 80 ~ 80 (86)
T 2kzr_A 80 R 80 (86)
T ss_dssp S
T ss_pred C
Confidence 3
No 82
>2dzj_A Synaptic glycoprotein SC2; ubiquitin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=1.2e-11 Score=97.03 Aligned_cols=71 Identities=23% Similarity=0.203 Sum_probs=61.2
Q ss_pred eEEEEEEEC-CeE--EEE-EeCCCCCHHHHHHHHHHH-hCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEE
Q psy11202 4 SLNLIIKWN-SKE--YKT-SLSKSNTVLELKQEILKQ-TGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMV 75 (360)
Q Consensus 4 ~i~i~vk~~-g~~--~~i-~v~~~~Tv~~LK~~I~~~-tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l 75 (360)
+|.|.||.. |++ +.| +|++++||.+||++|++. .||||++|+|+ +.++|++|+|+.+|++++|++|++|++
T Consensus 10 ~M~I~Vk~~~g~~~~~~l~~v~~~~TV~~lK~~I~~~~~~i~~~~QrL~-~~~~Gk~L~D~~tL~~y~i~~~stl~~ 85 (88)
T 2dzj_A 10 HYEVEILDAKTREKLCFLDKVEPHATIAEIKNLFTKTHPQWYPARQSLR-LDPKGKSLKDEDVLQKLPVGTTATLYF 85 (88)
T ss_dssp CEEEEEEESSSCCCCEEEEEECSSCBHHHHHHHHHHHCSSSCTTTCCEE-SSTTSCCCCTTCBTTTSSCCSEEEEEE
T ss_pred EEEEEEECCCCCEEeeEEeEcCCCCcHHHHHHHHHHHhcCCChHHeEEE-ecCCCcCcCCCCCHHHcCCCCCCEEEE
Confidence 488999964 444 468 899999999999999995 89999999998 224599999999999999999999875
No 83
>2gow_A HCG-1 protein, ubiquitin-like protein 3; BC059385, structural genomics, protein structure initiative, PSI; NMR {Homo sapiens}
Probab=99.20 E-value=2.9e-11 Score=100.81 Aligned_cols=74 Identities=14% Similarity=0.234 Sum_probs=65.1
Q ss_pred ceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHH------HhCC--CccCeeeeccccCCCCCCCccccccccCCCCC--
Q psy11202 3 DSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILK------QTGV--NPERQKLLNLKHAGKIPSDDTKLADTNATDGF-- 71 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~------~tgV--p~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~-- 71 (360)
++|.|+||. .|++++++|++++||.+||++|++ ..|+ +|++|+|+ |.|++|+|+.+|++++|+.|+
T Consensus 16 ~~m~I~vktl~G~~~~lev~~s~TV~~lK~~I~~~~p~dwke~ip~~~~~qrLI---y~GK~LeD~~TL~~y~I~~~~~~ 92 (125)
T 2gow_A 16 DMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLI---YQGRFLHGNVTLGALKLPFGKTT 92 (125)
T ss_dssp TCEEEEEECTTSCEEEEEECTTSBHHHHHHHHHSSCCCSCCCCTTCCGGGEEEE---SSSSEEESSCBTGGGCCCTTSEE
T ss_pred CeEEEEEEeCCCCEEEEEeCCccHHHHHHHHHHHHCCcccccCCCCChHHEEEE---ECCcCCCCCCcHHHcCCCCCCce
Confidence 358899995 689999999999999999999999 7888 49999999 999999999999999999887
Q ss_pred EEEEEccC
Q psy11202 72 KLMVMGSL 79 (360)
Q Consensus 72 ~i~l~gs~ 79 (360)
+|+|+...
T Consensus 93 tlhlv~r~ 100 (125)
T 2gow_A 93 VMHLVARE 100 (125)
T ss_dssp EEEEEECS
T ss_pred EEEEEecC
Confidence 45555444
No 84
>3b08_A Polyubiquitin-C, ubiquitin; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Homo sapiens} PDB: 2w9n_A* 3b0a_A* 3axc_A 2zvn_A 2zvo_A 2y5b_B
Probab=99.20 E-value=4.5e-11 Score=101.84 Aligned_cols=72 Identities=26% Similarity=0.423 Sum_probs=67.3
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
+.|.|+. .|+.+.+++++++||.+||++|++.+|+||++|+|+ |+|+.+.|+.+|++++|++|++|+|+...
T Consensus 77 ~~i~Vk~~~g~~~~~~v~~~~tv~~lK~~i~~~~gi~~~~qrL~---~~g~~L~d~~tL~~~~i~~~~~i~l~~r~ 149 (152)
T 3b08_A 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRL 149 (152)
T ss_dssp EEEEEEESSSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEECCTTSBTGGGTCCTTCEEEEEECC
T ss_pred cceeeeecCCCEEEEEeCCCCcHHHHHHHHHHHhCcChhhEEEE---ECCEECCCCCCHHHcCCCCCCEEEEEEec
Confidence 6788885 788999999999999999999999999999999999 99999999999999999999999998643
No 85
>3u5c_f 40S ribosomal protein S31; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_f
Probab=99.19 E-value=1.8e-12 Score=111.79 Aligned_cols=74 Identities=26% Similarity=0.409 Sum_probs=0.0
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
|.|.|++ .|+++.|+|++++||.+||++|++.+||||++|+|+ |+|+.|.|+.+|++++|++|++|+|+....+
T Consensus 1 MqI~VK~l~G~~~~l~V~~~~TV~~LK~~I~~~~gip~~~QrLi---~~Gk~L~D~~tL~dygI~~gstL~Lvlrl~G 75 (152)
T 3u5c_f 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75 (152)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CEEEEEeCCCCEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEE---ECCEEccccCcHHHcCCCCCCEEEEEeeccC
Confidence 4578887 688899999999999999999999999999999999 9999999999999999999999998865443
No 86
>3ai5_A Yeast enhanced green fluorescent protein, ubiquit; ubiquitin, fusion protein, fluore protein, transcription; HET: CR2; 1.40A {Aequorea victoria} PDB: 3ako_B*
Probab=99.17 E-value=5.6e-11 Score=113.27 Aligned_cols=72 Identities=26% Similarity=0.416 Sum_probs=68.0
Q ss_pred ceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 3 DSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.+|.|.||+ .|+.+.++|++++||.+||++|++.+||||++|+|+ ++|++|+|+.+|++++|++|++|+|+.
T Consensus 232 ~~MqI~VKtl~Gk~~~leV~~s~TV~dLK~kI~~~~GIp~~~QRLi---~~Gk~L~D~~TLsdygI~~gstL~Lvl 304 (307)
T 3ai5_A 232 GSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVL 304 (307)
T ss_dssp CCEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCEEE---ETTEECCTTSBTGGGTCCTTCEEEEEC
T ss_pred CeEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcChHHEEEE---eCCeecCCCCCHHHcCCCCCCEEEEEE
Confidence 358999998 688999999999999999999999999999999999 999999999999999999999999875
No 87
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=99.16 E-value=2.9e-11 Score=118.20 Aligned_cols=74 Identities=27% Similarity=0.340 Sum_probs=67.9
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHH---HhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILK---QTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~---~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
+|.|+||+ .|++|.|+|++++||.+||.+|++ .+|||+++|||+ |+||+|+|+.+|++|+|++|++|++|.+.
T Consensus 7 ~M~I~VKtl~Gk~~~leV~~~~TV~~LK~~I~~~~~~~gip~~~QrLi---y~GK~L~D~~tL~dygI~~gstIv~lv~k 83 (368)
T 1oqy_A 7 AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLI---YAGKILSDDVPIRDYRIDEKNFVVVMVTK 83 (368)
T ss_dssp CCCEEEEETTTEEEEECCCTTCBHHHHHHHHHHHTCSSSCCSTEEEEE---SSSSEECSSSBTTTTCCCTTSCEEEEEEC
T ss_pred eEEEEEEeCCCCEEEEEeCCCChHHHHHHHHHHHhCcCCCChhheEEE---ECCeecCCcCCHHHcCCCCCCEEEEEEec
Confidence 57899999 489999999999999999999999 688999999999 99999999999999999999999666555
Q ss_pred c
Q psy11202 80 E 80 (360)
Q Consensus 80 ~ 80 (360)
.
T Consensus 84 ~ 84 (368)
T 1oqy_A 84 T 84 (368)
T ss_dssp C
T ss_pred C
Confidence 4
No 88
>1wgh_A Ubiquitin-like 3, HCG-1 protein; ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1
Probab=99.15 E-value=7.8e-11 Score=96.96 Aligned_cols=73 Identities=12% Similarity=0.216 Sum_probs=64.3
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHH------HhCC--CccCeeeeccccCCCCCCCccccccccCCCCC--E
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILK------QTGV--NPERQKLLNLKHAGKIPSDDTKLADTNATDGF--K 72 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~------~tgV--p~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~--~ 72 (360)
.|.|+||. .|++++++|++++||.+||++|++ ..|+ ||+.|+|| |.|++|+|+.+|++|+|+.|+ +
T Consensus 16 ~m~I~vKtl~G~t~~lev~~s~TV~~lK~kI~~~~p~dwke~~p~p~~qqrLI---y~GK~LeD~~TL~~y~I~~~~~~t 92 (116)
T 1wgh_A 16 MINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLI---YQGRFLHGNVTLGALKLPFGKTTV 92 (116)
T ss_dssp SEEEEEECSSSCEEEEEECTTCBHHHHHHHHHHSSSCCSSCCCCCCTTTEEEE---ETTEEECSSCBTTTTTCCSSCEEE
T ss_pred eEEEEEEeCCCCEEEEEECCcCHHHHHHHHHHHhcccccccCCCCChHHEEEE---ECCcCCCCCCcHHHcCCCCCCceE
Confidence 58999995 789999999999999999999999 6675 69999999 999999999999999998775 5
Q ss_pred EEEEccC
Q psy11202 73 LMVMGSL 79 (360)
Q Consensus 73 i~l~gs~ 79 (360)
|+|+...
T Consensus 93 lhLvlr~ 99 (116)
T 1wgh_A 93 MHLVARE 99 (116)
T ss_dssp EEEEECS
T ss_pred EEEEccC
Confidence 6666443
No 89
>3u30_A Ubiquitin, linear DI-ubiquitin; immune system; 2.43A {Homo sapiens}
Probab=99.14 E-value=7.5e-11 Score=103.35 Aligned_cols=72 Identities=25% Similarity=0.420 Sum_probs=66.5
Q ss_pred eEEEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.+.|.|+ +.|+++.+++++++||.+||++|++.+||||++|+|+ |+|+.+.|+.+|++++|++|++|+|+..
T Consensus 96 g~~i~Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~q~L~---~~g~~L~D~~tL~~y~i~~g~tl~l~~r 168 (172)
T 3u30_A 96 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQKESTLHLVLR 168 (172)
T ss_dssp CEEEEEEESSCCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCCEE---ETTEECCTTSBSGGGTCCTTCEEEECC-
T ss_pred cccceeecccCcceeEEecCCCCHHHHHHHHHHHhCCCceeEEEE---ECCccCCCCCcHHHhCCCCCCEEEEEEe
Confidence 3667787 6889999999999999999999999999999999999 9999999999999999999999998754
No 90
>1wf9_A NPL4 family protein; beta-grAsp fold like domain, hypothetical protein, structural genomics, NPPSFA; NMR {Arabidopsis thaliana} SCOP: d.15.1.1
Probab=99.09 E-value=2e-10 Score=93.21 Aligned_cols=75 Identities=17% Similarity=0.126 Sum_probs=65.5
Q ss_pred eEEEEEEECCeEEEEEeC-CCCCHHHHHHHHHHHhCCCccCeeeeccccCCC-----------C----CCCccccccccC
Q psy11202 4 SLNLIIKWNSKEYKTSLS-KSNTVLELKQEILKQTGVNPERQKLLNLKHAGK-----------I----PSDDTKLADTNA 67 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~-~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk-----------~----l~D~~~L~~~~l 67 (360)
.|.|+||....++.|+|+ +++||.+||++|++.+||||++|+|+ +.|+ . +.|+.+|+++||
T Consensus 7 ~M~irvrs~~G~~~v~v~~~~~Tv~~LK~kI~~~~gip~~~QrL~---~~~~~~~~k~~~~~~~l~~~l~d~~tL~~~gi 83 (107)
T 1wf9_A 7 GTMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLS---TNRNLLLAKSPSDFLAFTDMADPNLRISSLNL 83 (107)
T ss_dssp CEEEEEECSSCEEEEEECCTTSBHHHHHHHHHHHSCCCTTTCCCB---SSGGGGTCCSHHHHTTCCSSCCTTCBGGGTCC
T ss_pred eEEEEEECCCCCEEEEECCCCCcHHHHHHHHHHHhCcCcccCEEE---ECCccccccCccccccccccCCCCCCHHHCCC
Confidence 377999987667789999 99999999999999999999999998 6666 3 578889999999
Q ss_pred CCCCEEEEEccCcc
Q psy11202 68 TDGFKLMVMGSLEQ 81 (360)
Q Consensus 68 ~~g~~i~l~gs~~~ 81 (360)
++|++|+|.-..+.
T Consensus 84 ~~G~~L~l~~~~~~ 97 (107)
T 1wf9_A 84 AHGSMVYLAYEGER 97 (107)
T ss_dssp CTTCEEECCCSSCC
T ss_pred CCCCEEEEEeCCCC
Confidence 99999998866554
No 91
>1se9_A Ubiquitin family; ubiquitin-like, cell-free, wheat GERM, structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana} SCOP: d.15.1.1
Probab=99.06 E-value=2.9e-10 Score=94.67 Aligned_cols=74 Identities=16% Similarity=0.279 Sum_probs=62.8
Q ss_pred ceEEEEEEE-CCeEE-EEEeCCCCCHHHHHHHH-----HHHhCCCc--cCeeeeccccCCCCCCCccccccccCCCC---
Q psy11202 3 DSLNLIIKW-NSKEY-KTSLSKSNTVLELKQEI-----LKQTGVNP--ERQKLLNLKHAGKIPSDDTKLADTNATDG--- 70 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~-~i~v~~~~Tv~~LK~~I-----~~~tgVp~--~rQKLlgl~~kgk~l~D~~~L~~~~l~~g--- 70 (360)
+.+.|+||. .|+.+ ++++++++||.+||++| ++..|+|+ ++|||| |.||+|.|+.+|++++|+.|
T Consensus 15 ~~~~i~~kt~~G~~i~~l~v~psdTV~~lK~kI~~~~p~dkegiP~~~~qQrLI---y~GK~LeD~~TLsdy~I~~~~~~ 91 (126)
T 1se9_A 15 NQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLI---SAGKVLENSKTVKDYRSPVSNLA 91 (126)
T ss_dssp CCEEEEEEETTSCEEEEEEECTTCBHHHHHHHHHHHSCTTCSSSCCSGGGEEEE---ETTEECCTTSBGGGGSCCTTSCT
T ss_pred ccEEEEEEECCCCEEEeeecCccCHHHHHHHHHHhhcccccccCCCChhhEEEE---ECCeECcCCCcHHHcCCCcCCcc
Confidence 358899986 56677 79999999999999999 45678987 899999 99999999999999999998
Q ss_pred ---CEEEEEccC
Q psy11202 71 ---FKLMVMGSL 79 (360)
Q Consensus 71 ---~~i~l~gs~ 79 (360)
.+|+|+-..
T Consensus 92 ~~v~tmhlVlrl 103 (126)
T 1se9_A 92 GAVTTMHVIIQA 103 (126)
T ss_dssp TCCEEEEEEECC
T ss_pred CCcEEEEEEecc
Confidence 456665433
No 92
>1wjn_A Tubulin-folding protein TBCE; ubiquitin-like domain, progressive motor neuropathy, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=98.89 E-value=4.9e-09 Score=83.27 Aligned_cols=73 Identities=23% Similarity=0.155 Sum_probs=61.7
Q ss_pred ceEEEEEEE----CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCC-----C---CCCCccccccccCCCC
Q psy11202 3 DSLNLIIKW----NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAG-----K---IPSDDTKLADTNATDG 70 (360)
Q Consensus 3 ~~i~i~vk~----~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kg-----k---~l~D~~~L~~~~l~~g 70 (360)
.+|+|+|++ .++.+++.++.+.||.+||.+|+..||+||..|+|. +.+ . +.+|..+|+.+++.+|
T Consensus 8 ~~v~l~I~~~~~~~~~~~e~~l~~~~TV~~LK~~i~~~~gip~~~q~L~---~~~~~~~~~~~~L~~d~~~L~~y~i~~G 84 (97)
T 1wjn_A 8 QLLTLKIKCSNQPERQILEKQLPDSMTVQKVKGLLSRLLKVPVSELLLS---YESSKMPGREIELENDLQPLQFYSVENG 84 (97)
T ss_dssp CEEEEEEEESSCSSSCCEEEEEETTSBHHHHHHHHHTTTTCCTTTCEEE---EECTTSCSCEEECCCSSSBSGGGTCCTT
T ss_pred ccEEEEEEecCCCCCcEEEEECCCCCCHHHHHHHHHHHHCCChhHeEEE---EEcCCCCceeeccCCCcccHhhcCCCCC
Confidence 358888886 466788999999999999999999999999999998 542 1 2366789999999999
Q ss_pred CEEEEEcc
Q psy11202 71 FKLMVMGS 78 (360)
Q Consensus 71 ~~i~l~gs 78 (360)
++|+|.-+
T Consensus 85 ~~I~V~d~ 92 (97)
T 1wjn_A 85 DCLLVRWS 92 (97)
T ss_dssp CEEEEECC
T ss_pred CEEEEEec
Confidence 99998753
No 93
>2xzm_9 RPS31E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_9
Probab=98.73 E-value=1.2e-09 Score=96.86 Aligned_cols=67 Identities=19% Similarity=0.310 Sum_probs=0.0
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccC
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSL 79 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~ 79 (360)
|.|.|+. .|++++|+|++++||.+||++|++.+||||+.|+|+ |.|++|.|+.+|+ +|++|.|+...
T Consensus 1 MqI~VKtL~GktitLeV~~sdTV~~LK~kI~~keGIP~~qQRLI---f~GK~LeD~~TLs-----~~STLhLvlRL 68 (189)
T 2xzm_9 1 MQVQVKTLEGETKIYTLEQGTSVLDLKSQISQDMGFEIDMMTLV---NNGFIAPNTELVT-----DDVTYYLSLKL 68 (189)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred CEEEEEcCCCCEEEEEECCcChHHHHHHHHHHHhCcChhHEEEE---ecCeECCCCCccc-----CCCEEEEEEec
Confidence 3477875 688999999999999999999999999999999999 9999999998888 88999887544
No 94
>2pjh_A Protein NPL4, nuclear protein localization protein 4 homolog; UFD1, NPL4, AAA, protein binding, transport protein; NMR {Mus musculus}
Probab=98.68 E-value=2e-08 Score=77.15 Aligned_cols=74 Identities=16% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccC--CCC-CCCccccccccCCCCCEEEE
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHA--GKI-PSDDTKLADTNATDGFKLMV 75 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~k--gk~-l~D~~~L~~~~l~~g~~i~l 75 (360)
|..+|.|+|++....+.|++++++|+.+|+++|++.+++++..|.|. +.+. +.+ +..+.+|+++||+.|+.|++
T Consensus 1 ~~~~m~lRvrs~~G~~Ri~v~~~~t~~~L~~~I~~~~~i~~~~~~l~-~~~~p~~~l~~~~~~~l~~lgl~hGd~l~l 77 (80)
T 2pjh_A 1 MAESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVY-INRNKTGEITASSSKSLHLLKIKHGDLLFL 77 (80)
T ss_dssp -CCCCCCEEECSSEEEECCCCSSCCHHHHHHHHHHHTCCCTTTCCCC-CSCCGGGGSSSCCCCTTTTTCCCTTCCEEC
T ss_pred CCCcEEEEEECCCCCEEEEcCCcChHHHHHHHHHHHcCCCCCcceEE-ecCCCCCcccCCCCCCHHHcCCCCCCEEEE
Confidence 66678899999999999999999999999999999999999999886 1111 111 23567899999999999975
No 95
>3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A
Probab=98.60 E-value=1.3e-07 Score=72.22 Aligned_cols=71 Identities=20% Similarity=0.203 Sum_probs=66.1
Q ss_pred eEEEEEEE-CCe-EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKW-NSK-EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~-~g~-~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.|+|+|+. .|+ .+.+.|.+++++..|+.++++..|++++.|+++ |.|+.+.++.+.+++++.+|+.|.++|
T Consensus 7 ~i~ikV~~~~g~~~i~~~i~~~t~l~kl~~~y~~~~gi~~~~~rf~---fdG~~l~~~~Tp~~l~medgD~Idv~~ 79 (79)
T 3a4r_A 7 ELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFF---FDGTKLSGKELPADLGLESGDLIEVWG 79 (79)
T ss_dssp CEEEEEECSSTTCEEEEEECTTSCHHHHHHHHHHHHTCTTCCCEEE---ETTEECCSCCCHHHHTCCTTCEEEEEC
T ss_pred EEEEEEEeCCCCEEEEEEECCCChHHHHHHHHHHHhCCCcccEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEeC
Confidence 48899996 563 789999999999999999999999999999999 999999999999999999999999886
No 96
>2io1_B Small ubiquitin-related modifier 3 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=98.57 E-value=1.4e-07 Score=74.55 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=66.8
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|+|+|+. .|+.+.+.|.+++++..|++++++..|+|++.|+++ |.|+.+.++.+++++++.+|++|.++-.
T Consensus 7 ~i~ikVk~~~g~~i~~~v~~~t~l~kl~~~y~~~~gi~~~~~rf~---FdG~~l~~~~Tp~dl~medgD~Idv~~~ 79 (94)
T 2io1_B 7 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFR---FDGQPINETDTPAQLEMEDEDTIDVFQQ 79 (94)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTCCTTTTTCCTTCEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHhCCCcccEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEEEe
Confidence 48999996 677889999999999999999999999999999999 9999999999999999999999988743
No 97
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=98.57 E-value=1.7e-07 Score=70.29 Aligned_cols=69 Identities=12% Similarity=0.183 Sum_probs=64.6
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|+|+|+. .|+.+.+.|.+++++..|+.++++..|++++.|+++ |.|+.+.++.+.+++++.+|+.|.++
T Consensus 2 i~lkV~~~~g~~v~~~v~~~t~l~kl~~~y~~~~gi~~~~~rf~---fdG~~l~~~~Tp~~l~medgD~Idv~ 71 (72)
T 1wm3_A 2 INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFR---FDGQPINETDTPAQLEMEDEDTIDVF 71 (72)
T ss_dssp EEEEEECTTSCEEEEEECTTSCTHHHHHHHHHHHTCCTTTCEEE---ETTEECCTTCCTTTTTCCTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcceEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEE
Confidence 6888986 677899999999999999999999999999999999 99999999999999999999999875
No 98
>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1
Probab=98.54 E-value=1.9e-07 Score=73.39 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=66.6
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|+|+|+. .|+.+.+.|.+++++..|+.++++..|++++.|+++ |.|+.+.++.|.+++++.+|+.|-++-.
T Consensus 5 ~i~ikVk~~~g~~v~~~vk~~t~l~kl~~~y~~~~gi~~~~~rf~---FdG~~l~~~~Tp~dl~medgD~Idv~~~ 77 (91)
T 2io0_B 5 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFR---FDGQPINETDTPAQLEMEDEDTIDVFQQ 77 (91)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHTTCCSTTEEEE---ETTEECCTTCCTTTTTCCTTEEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcccEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEEEe
Confidence 48999996 677889999999999999999999999999999999 9999999999999999999999987743
No 99
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=98.52 E-value=1.7e-07 Score=81.95 Aligned_cols=119 Identities=21% Similarity=0.153 Sum_probs=80.9
Q ss_pred CceEEeecccceeecCCC-----------------cccceeecCccHHHHHHHHhc-CCeEEEEcCCc-HHHHHHHHHHh
Q psy11202 138 KKLLVLDIDYTLFDHRSA-----------------AEQGYELMRPYLHEFLTSAYK-NYDIAIWSATG-MKWIEEKMKLL 198 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~-----------------~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~-~~ya~~il~~L 198 (360)
.++++|||||||+..... .........|++.++|+.|.+ ++.++|.|+++ ..++..+++.+
T Consensus 27 ~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~ 106 (187)
T 2wm8_A 27 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF 106 (187)
T ss_dssp CSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT
T ss_pred cCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc
Confidence 579999999999853211 002245678999999999987 79999999999 79999999999
Q ss_pred CCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 199 GVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 199 ~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
|+...+. .+... ..++. ..+.+-+..+ + .++++|++|+|++.........|+...-+.
T Consensus 107 gl~~~f~----~~~~~------~~~k~-~~~~~~~~~~-----~-~~~~~~~~igD~~~Di~~a~~aG~~~i~v~ 164 (187)
T 2wm8_A 107 DLFRYFV----HREIY------PGSKI-THFERLQQKT-----G-IPFSQMIFFDDERRNIVDVSKLGVTCIHIQ 164 (187)
T ss_dssp TCTTTEE----EEEES------SSCHH-HHHHHHHHHH-----C-CCGGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred CcHhhcc----eeEEE------eCchH-HHHHHHHHHc-----C-CChHHEEEEeCCccChHHHHHcCCEEEEEC
Confidence 8764322 11000 00110 0111112222 1 456899999999988877778888766554
No 100
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=98.48 E-value=4.2e-08 Score=86.66 Aligned_cols=93 Identities=16% Similarity=0.115 Sum_probs=68.1
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhccc
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGK 239 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~ 239 (360)
....||+.++|+.+.+ ++.++|.|+++..++..+++.+|+..+++.. +.. ...+ ..|+-+.++..
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~----~~~--------~~~~--~~KP~p~~~~~ 148 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVM----VFG--------DQVK--NGKPDPEIYLL 148 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE----ECG--------GGSS--SCTTSTHHHHH
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccccc----ccc--------cccC--CCcccHHHHHH
Confidence 4568999999999976 8999999999999999999999887665422 111 1222 24555544421
Q ss_pred ---CCCCCCCCcEEEEeCCchhhccCCCCeeE
Q psy11202 240 ---FPSLYNPTNTIMFDDIRRNFLMNPRNGLR 268 (360)
Q Consensus 240 ---~~~~~~~~ntIivDD~~~~~~~~p~Ngi~ 268 (360)
..+ .+|++||+|+|++.........|+.
T Consensus 149 a~~~lg-~~p~e~l~VgDs~~Di~aA~~aG~~ 179 (216)
T 3kbb_A 149 VLERLN-VVPEKVVVFEDSKSGVEAAKSAGIE 179 (216)
T ss_dssp HHHHHT-CCGGGEEEEECSHHHHHHHHHTTCC
T ss_pred HHHhhC-CCccceEEEecCHHHHHHHHHcCCc
Confidence 112 5679999999999988877777765
No 101
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=98.40 E-value=5.8e-08 Score=79.31 Aligned_cols=111 Identities=15% Similarity=0.060 Sum_probs=78.9
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSA 216 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~ 216 (360)
.+++++|+||||.+ .....|++.++|+.|.+ ++.++|.|.++..++..+++.+++...+...+ ..+
T Consensus 2 ~k~i~~D~DgtL~~--------~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~----~~~- 68 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG--------TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVL----LSG- 68 (137)
T ss_dssp CCEEEECSTTTTSS--------CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEE----EHH-
T ss_pred CcEEEEeccceecC--------CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEE----Eec-
Confidence 47899999999932 22357999999999987 79999999999999999999997755443211 111
Q ss_pred ceeecccccCcceeeechhhcc----cCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 217 MISVHLPKYGVVEVKPLGVIWG----KFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 217 ~~~~~~~~~g~~~~KdL~~l~~----~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ ..|+-..++. .+ + .+++++++|+|++.........|+....+
T Consensus 69 -------~~~--~~Kp~~~~~~~~~~~~-~-~~~~~~~~vgD~~~di~~a~~~G~~~i~~ 117 (137)
T 2pr7_A 69 -------ELG--VEKPEEAAFQAAADAI-D-LPMRDCVLVDDSILNVRGAVEAGLVGVYY 117 (137)
T ss_dssp -------HHS--CCTTSHHHHHHHHHHT-T-CCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred -------cCC--CCCCCHHHHHHHHHHc-C-CCcccEEEEcCCHHHHHHHHHCCCEEEEe
Confidence 111 1344443332 22 2 46689999999999887777788865555
No 102
>2d07_B Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 2rpq_A 2awt_A 2io3_B 2iyd_B 1u4a_A 2k1f_A
Probab=98.38 E-value=1.1e-06 Score=69.35 Aligned_cols=71 Identities=11% Similarity=0.172 Sum_probs=65.7
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.|+|+|+. .|+.+.+.|.+++++..|+.++++..|++++.|+++ |.|+.+.++.+.+++++.+|++|.++-
T Consensus 17 ~i~ikV~~~~g~~i~~~v~~~t~l~kl~~~y~~~~gi~~~~~rf~---fdG~~l~~~~Tp~dl~medgD~Idv~~ 88 (93)
T 2d07_B 17 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFR---FDGQPINETDTPAQLEMEDEDTIDVFQ 88 (93)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCHHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTCCTTTTTCCTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEEccCCHHHHHHHHHHHHhCCCccceEEE---ECCEEcCCCCCHHHcCCCCCCEEEEEe
Confidence 48889986 577788999999999999999999999999999999 999999999999999999999998764
No 103
>1wz0_A Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-like molecule, structural genomics, sentrin2, NPPFSA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=98.38 E-value=1.1e-06 Score=70.62 Aligned_cols=71 Identities=11% Similarity=0.172 Sum_probs=66.0
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.|+|+|+. .|+.+.+.|..++++..|+.++++..|+++..|+++ |.|+.+.++.+..++++.+|++|.++-
T Consensus 24 ~I~IkVk~~~g~~i~~kVk~~t~l~kL~~~y~ek~gi~~~~~rf~---FdG~~l~~~~Tp~dl~medgD~Idv~~ 95 (104)
T 1wz0_A 24 HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFR---FDGQPINETDTPAQLEMEDEDTIDVFQ 95 (104)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCHHHHHHHHHHHHTCCTTTSCEE---SSSSBCCTTSCTTTTTCCTTEEEEECC
T ss_pred eEEEEEECCCCCEEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEEE
Confidence 48899986 677788999999999999999999999999999999 999999999999999999999998873
No 104
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=98.32 E-value=3.8e-07 Score=79.88 Aligned_cols=125 Identities=16% Similarity=0.141 Sum_probs=83.6
Q ss_pred CCceEEeecccceeecCCCcc-------cceeecCccHHHHHHHHhc-CCeEEEEcCCcH---HHHHHHHHHhCCCCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAE-------QGYELMRPYLHEFLTSAYK-NYDIAIWSATGM---KWIEEKMKLLGVTVNPN 205 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~-------~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~---~ya~~il~~L~~~~~~~ 205 (360)
+.++++||+||||+......+ ...+...|++.++|+.|.+ +|.++|.|+++. .++..+++.+|+..++
T Consensus 2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f- 80 (189)
T 3ib6_A 2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF- 80 (189)
T ss_dssp -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE-
T ss_pred CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe-
Confidence 357899999999987433111 1236789999999999987 799999998876 8999999999886543
Q ss_pred ceEEEEEecCCceeecccccCcceeeechhhcccC---CCCCCCCcEEEEeCC-chhhccCCCCeeEeccc
Q psy11202 206 YKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF---PSLYNPTNTIMFDDI-RRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 206 ~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~---~~~~~~~ntIivDD~-~~~~~~~p~Ngi~I~~f 272 (360)
..++..+..+. .....|+-..++... .+ .+++++|+|+|+ ...+......|+...-+
T Consensus 81 ---d~i~~~~~~~~------~~~~~KP~p~~~~~~~~~~~-~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v 141 (189)
T 3ib6_A 81 ---DFIYASNSELQ------PGKMEKPDKTIFDFTLNALQ-IDKTEAVMVGNTFESDIIGANRAGIHAIWL 141 (189)
T ss_dssp ---EEEEECCTTSS------TTCCCTTSHHHHHHHHHHHT-CCGGGEEEEESBTTTTHHHHHHTTCEEEEE
T ss_pred ---EEEEEcccccc------ccCCCCcCHHHHHHHHHHcC-CCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 23333221100 001245544443210 12 567999999999 67777777777765544
No 105
>2k8h_A Small ubiquitin protein; SUMO, post-translational modifier, signaling protein; NMR {Trypanosoma brucei}
Probab=98.31 E-value=1.3e-06 Score=70.96 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=67.6
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
.|+|+|+. .|+.+.+.|.+++++..|+.++++..|++++.|+++ |.|+.+.++.|..++++.+|++|.++-...
T Consensus 26 ~I~IkVk~~~g~~i~fkVk~~t~l~kL~~ay~ek~gi~~~~~rfi---FdG~~L~~~~Tp~dl~mEDgD~Idv~~~q~ 100 (110)
T 2k8h_A 26 LVAVKVVNADGAEMFFRIKSRTALKKLIDTYCKKQGISRNSVRFL---FDGTPIDETKTPEELGMEDDDVIDAMVEQT 100 (110)
T ss_dssp CEEEEEEETTSCCEEEEECTTSSHHHHHHHHHHHHTCCSSSCEEE---SSSCBCCSSSHHHHHHCSSEEEEEEECCCC
T ss_pred eEEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcccEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEEEccc
Confidence 48999997 567789999999999999999999999999999999 999999999999999999999998875443
No 106
>2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1
Probab=98.31 E-value=1.4e-06 Score=70.39 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=65.8
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.|+|+|+..|+...+.|..++++..|+.++++..|+++..|+++ |.|+.+.++.|.+++++.+|++|.++-
T Consensus 31 ~I~IkV~~~g~~i~fkIk~tt~l~kL~~ay~ek~gi~~~~~rF~---FdG~rl~~~~Tp~dl~medgD~Idv~~ 101 (106)
T 2eke_C 31 HINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFL---YDGIRIQADQTPEDLDMEDNDIIEAHR 101 (106)
T ss_dssp EEEEEEECSSCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEE---ETTEECCTTCCTTTTTCCTTEEEEEEE
T ss_pred eEEEEEecCCcEEEEEeCCCCHHHHHHHHHHHHhCCCcccEEEE---ECCeEcCCCCCHHHcCCCCCCEEEEEe
Confidence 38888888777888999999999999999999999999999999 999999999999999999999998764
No 107
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=98.30 E-value=1.5e-06 Score=75.53 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=84.6
Q ss_pred CCCceEEeecccceeecCCC----cccceeecCccHHHHHHHHhc-CCeEEEEcCC---------------cHHHHHHHH
Q psy11202 136 PGKKLLVLDIDYTLFDHRSA----AEQGYELMRPYLHEFLTSAYK-NYDIAIWSAT---------------GMKWIEEKM 195 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~----~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas---------------~~~ya~~il 195 (360)
.+.++++||+||||+...+. .........|++.++|+.|.+ +|.++|.|++ ...++..++
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l 91 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF 91 (176)
T ss_dssp -CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH
T ss_pred CcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH
Confidence 37799999999999976421 112346678999999999987 7999999999 678999999
Q ss_pred HHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC---CCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 196 KLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF---PSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 196 ~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~---~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+.+|+. +..++.... ...... ...|+-..+|... .+ .+++++|+|+|++.........|+...-+
T Consensus 92 ~~~gl~------fd~v~~s~~---~~~~~~--~~~KP~p~~~~~~~~~~g-i~~~~~l~VGD~~~Di~~A~~aG~~~i~v 159 (176)
T 2fpr_A 92 TSQGVQ------FDEVLICPH---LPADEC--DCRKPKVKLVERYLAEQA-MDRANSYVIGDRATDIQLAENMGINGLRY 159 (176)
T ss_dssp HHTTCC------EEEEEEECC---CGGGCC--SSSTTSCGGGGGGC-----CCGGGCEEEESSHHHHHHHHHHTSEEEEC
T ss_pred HHcCCC------eeEEEEcCC---CCcccc--cccCCCHHHHHHHHHHcC-CCHHHEEEEcCCHHHHHHHHHcCCeEEEE
Confidence 998764 222211000 000111 1245544444322 12 56799999999998888777888876655
Q ss_pred c
Q psy11202 273 R 273 (360)
Q Consensus 273 ~ 273 (360)
.
T Consensus 160 ~ 160 (176)
T 2fpr_A 160 D 160 (176)
T ss_dssp B
T ss_pred c
Confidence 4
No 108
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=98.25 E-value=1.5e-06 Score=77.02 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=67.8
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+|+...+...+ ..+. .+ ..|+-...+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~----~~~~--------~~--~~Kp~~~~~~~ 167 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSII----GSGD--------TG--TIKPSPEPVLA 167 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE----EETS--------SS--CCTTSSHHHHH
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEE----cccc--------cC--CCCCChHHHHH
Confidence 4678999999999987 69999999999999999999998865543221 1111 11 123222221
Q ss_pred --ccCCCCCCCC-cEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 --GKFPSLYNPT-NTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 --~~~~~~~~~~-ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
+.+ + .+++ +|++|+|++....+....|+...-+.
T Consensus 168 ~~~~l-g-i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~ 204 (231)
T 3kzx_A 168 ALTNI-N-IEPSKEVFFIGDSISDIQSAIEAGCLPIKYG 204 (231)
T ss_dssp HHHHH-T-CCCSTTEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHc-C-CCcccCEEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 111 2 4567 89999999988888877887666553
No 109
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=98.23 E-value=1.2e-06 Score=75.45 Aligned_cols=123 Identities=11% Similarity=0.058 Sum_probs=81.0
Q ss_pred CceEEeecccceeecCCC--cccceeecCccHHHHHHHHhc-CCeEEEEcCCcH---------------HHHHHHHHHhC
Q psy11202 138 KKLLVLDIDYTLFDHRSA--AEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGM---------------KWIEEKMKLLG 199 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~--~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~---------------~ya~~il~~L~ 199 (360)
.|+++||+||||++.... .........|++.++|+.|.+ +|.++|.|+++. .++..+++.+|
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 80 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG 80 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence 478999999999976421 111245678999999999987 799999999986 78888898886
Q ss_pred CCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC---CCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 200 VTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF---PSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 200 ~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~---~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
. +....+.+.... ... ....|+-..++... .+ .+++++++|+|+.....+....|+...-+
T Consensus 81 ~--~~~~~~~~~~~~-------~~~--~~~~KP~~~~~~~~~~~~~-~~~~~~~~vGD~~~Di~~a~~aG~~~i~v 144 (179)
T 3l8h_A 81 G--VVDAIFMCPHGP-------DDG--CACRKPLPGMYRDIARRYD-VDLAGVPAVGDSLRDLQAAAQAGCAPWLV 144 (179)
T ss_dssp C--CCCEEEEECCCT-------TSC--CSSSTTSSHHHHHHHHHHT-CCCTTCEEEESSHHHHHHHHHHTCEEEEE
T ss_pred C--ceeEEEEcCCCC-------CCC--CCCCCCCHHHHHHHHHHcC-CCHHHEEEECCCHHHHHHHHHCCCcEEEE
Confidence 1 222222221110 011 11245544443211 12 56799999999998888877788754444
No 110
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=98.17 E-value=8.4e-07 Score=76.76 Aligned_cols=96 Identities=13% Similarity=0.172 Sum_probs=67.7
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
..+|++.++|+.+.+ ++.++|.|++...+++.+++.+++...+.. ++..+ ..+ ..|+=...+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~kp~~~~~~~~ 154 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI----VLSGE--------EFK--ESKPNPEIYLTA 154 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----EEEGG--------GCS--SCTTSSHHHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----Eeecc--------ccc--CCCCChHHHHHH
Confidence 578999999999987 699999999999999999999988655432 11111 111 123222111
Q ss_pred -ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
+.+ + .++++|++|+|+.....+....|+.+.-+.
T Consensus 155 ~~~~-~-~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 189 (214)
T 3e58_A 155 LKQL-N-VQASRALIIEDSEKGIAAGVAADVEVWAIR 189 (214)
T ss_dssp HHHH-T-CCGGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHc-C-CChHHeEEEeccHhhHHHHHHCCCEEEEEC
Confidence 111 2 567999999999988888877887665554
No 111
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=98.15 E-value=6e-07 Score=81.59 Aligned_cols=119 Identities=14% Similarity=0.116 Sum_probs=76.6
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhccc-
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGK- 239 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~- 239 (360)
...||+.++|+.+.. ++.++|.|++. .+..+++.+|+..++. +++.. ...+ ..|+-+.++..
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd----~i~~~--------~~~~--~~KP~p~~~~~a 158 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFT----FCADA--------SQLK--NSKPDPEIFLAA 158 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCS----EECCG--------GGCS--SCTTSTHHHHHH
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccc----ccccc--------cccc--CCCCcHHHHHHH
Confidence 357999999999976 89999999874 5788899998876543 22221 1222 24655555421
Q ss_pred --CCCCCCCCcEEEEeCCchhhccCCCCeeEecccccCcCC------CCCchHHHHHHHHHHhccC
Q psy11202 240 --FPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFREAHLN------RGSDRELKRLGRYLDEIAT 297 (360)
Q Consensus 240 --~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~~~~~~------~~~D~~L~~L~~~L~~la~ 297 (360)
..+ .++++||+|+|++.........|++..-......+ ...|-.+..|..+++.|+.
T Consensus 159 ~~~lg-~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l~~ 223 (243)
T 4g9b_A 159 CAGLG-VPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNVAE 223 (243)
T ss_dssp HHHHT-SCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHHSC
T ss_pred HHHcC-CChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHHHH
Confidence 112 56799999999999888888888765544321111 1234445666666666653
No 112
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=98.14 E-value=1.4e-06 Score=76.86 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=68.0
Q ss_pred eecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhccc-
Q psy11202 161 ELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGK- 239 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~- 239 (360)
....||+.++|+.+.++|.++|.|++...++..+++.+|+..++...+.. + + ..|+=..++..
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~----~----------~--~~Kp~p~~~~~~ 146 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGS----S----------P--EAPHKADVIHQA 146 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEE----C----------S--SCCSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecC----C----------C--CCCCChHHHHHH
Confidence 34579999999999889999999999999999999999887655422111 1 1 12333333311
Q ss_pred --CCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 240 --FPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 240 --~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ .++++||+|+|++....+....|+....+
T Consensus 147 ~~~lg-~~p~~~~~vgDs~~Di~~a~~aG~~~i~v 180 (210)
T 2ah5_A 147 LQTHQ-LAPEQAIIIGDTKFDMLGARETGIQKLAI 180 (210)
T ss_dssp HHHTT-CCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHcC-CCcccEEEECCCHHHHHHHHHCCCcEEEE
Confidence 113 56799999999998888887888865444
No 113
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=98.13 E-value=1.8e-06 Score=79.55 Aligned_cols=96 Identities=13% Similarity=0.084 Sum_probs=66.2
Q ss_pred eecCccHHHHHHHHhc-CC--eEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc
Q psy11202 161 ELMRPYLHEFLTSAYK-NY--DIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~y--eivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~ 237 (360)
....|++.++|+.+.+ ++ .++|.|++...++..+++.+|+...+...+ ..+.. .......|+-...+
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~----~~~~~------~~~~~~~Kp~~~~~ 210 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT----YCDYS------RTDTLVCKPHVKAF 210 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE----CCCCS------SCSSCCCTTSHHHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE----EeccC------CCcccCCCcCHHHH
Confidence 4468999999999987 78 999999999999999999998876554322 11100 00001124322222
Q ss_pred ----ccCCCCCCC-CcEEEEeCCchhhccCCCCeeE
Q psy11202 238 ----GKFPSLYNP-TNTIMFDDIRRNFLMNPRNGLR 268 (360)
Q Consensus 238 ----~~~~~~~~~-~ntIivDD~~~~~~~~p~Ngi~ 268 (360)
+.+ + .++ ++||+|+|++....+....|+.
T Consensus 211 ~~~~~~l-g-i~~~~~~i~vGD~~~Di~~a~~aG~~ 244 (282)
T 3nuq_A 211 EKAMKES-G-LARYENAYFIDDSGKNIETGIKLGMK 244 (282)
T ss_dssp HHHHHHH-T-CCCGGGEEEEESCHHHHHHHHHHTCS
T ss_pred HHHHHHc-C-CCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 111 3 566 8999999999888888778873
No 114
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=98.09 E-value=2.9e-06 Score=75.69 Aligned_cols=129 Identities=9% Similarity=-0.014 Sum_probs=79.6
Q ss_pred CCCceEEeecccceeecCCCc-ccceeecCccHHHHHHHHhc-CCeEEEEcCCc---------------HHHHHHHHHHh
Q psy11202 136 PGKKLLVLDIDYTLFDHRSAA-EQGYELMRPYLHEFLTSAYK-NYDIAIWSATG---------------MKWIEEKMKLL 198 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~~-~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~---------------~~ya~~il~~L 198 (360)
...++++||+||||+...... ........|++.++|++|.+ +|.++|.|+++ ..++..+++.+
T Consensus 23 ~~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (211)
T 2gmw_A 23 KSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR 102 (211)
T ss_dssp -CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT
T ss_pred hcCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc
Confidence 356899999999999764211 11235668999999999987 79999999999 58999999999
Q ss_pred CCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC---CCCCCCCcEEEEeCCchhhccCCCCeeEe
Q psy11202 199 GVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF---PSLYNPTNTIMFDDIRRNFLMNPRNGLRI 269 (360)
Q Consensus 199 ~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~---~~~~~~~ntIivDD~~~~~~~~p~Ngi~I 269 (360)
|+. +...+.+.-+.+......... ....|+-..++... .+ .+++++++|+|+.....+....|+..
T Consensus 103 gl~--f~~~~~~~~~~~~~~~~~~~~--~~~~KP~p~~~~~~~~~lg-i~~~~~~~VGD~~~Di~~a~~aG~~~ 171 (211)
T 2gmw_A 103 DVD--LDGIYYCPHHPQGSVEEFRQV--CDCRKPHPGMLLSARDYLH-IDMAASYMVGDKLEDMQAAVAANVGT 171 (211)
T ss_dssp TCC--CSEEEEECCBTTCSSGGGBSC--CSSSTTSCHHHHHHHHHHT-BCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred CCc--eEEEEECCcCCCCcccccCcc--CcCCCCCHHHHHHHHHHcC-CCHHHEEEEcCCHHHHHHHHHCCCce
Confidence 875 222111100000000000000 11234433332110 12 46789999999998887777777543
No 115
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.08 E-value=2.6e-06 Score=74.98 Aligned_cols=96 Identities=9% Similarity=0.118 Sum_probs=67.1
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...+++.+++.+|+...+...+. .+. .+. .|+-...+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~----~~~--------~~~--~kp~~~~~~~ 150 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVG----SSL--------DGK--LSTKEDVIRY 150 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE----ECT--------TSS--SCSHHHHHHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeec----cCC--------CCC--CCCCHHHHHH
Confidence 4578999999999987 799999999999999999999987655432211 111 111 22222222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|+.....+....|+....+
T Consensus 151 ~~~~l-g-i~~~~~i~iGD~~~Di~~a~~aG~~~i~v 185 (226)
T 3mc1_A 151 AMESL-N-IKSDDAIMIGDREYDVIGALKNNLPSIGV 185 (226)
T ss_dssp HHHHH-T-CCGGGEEEEESSHHHHHHHHTTTCCEEEE
T ss_pred HHHHh-C-cCcccEEEECCCHHHHHHHHHCCCCEEEE
Confidence 111 2 45689999999998888888888854444
No 116
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=98.07 E-value=1.3e-06 Score=75.62 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=66.6
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+++...+.. ++..+ ..+ ..|+-...+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~----~~~~~--------~~~--~~kp~~~~~~~ 148 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV----MVFGD--------QVK--NGKPDPEIYLL 148 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE----EECGG--------GSS--SCTTSTHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCE----Eeecc--------cCC--CCCcCcHHHHH
Confidence 5778999999999987 699999999999999999999987655432 11111 111 123222222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
..+ + .++++|++|+|++....+....|+...
T Consensus 149 ~~~~~-~-~~~~~~i~iGD~~~Di~~a~~aG~~~i 181 (216)
T 2pib_A 149 VLERL-N-VVPEKVVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp HHHHH-T-CCGGGEEEEECSHHHHHHHHHTTCCEE
T ss_pred HHHHc-C-CCCceEEEEeCcHHHHHHHHHcCCcEE
Confidence 111 2 567999999999988888878888555
No 117
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.06 E-value=1.8e-06 Score=73.32 Aligned_cols=112 Identities=18% Similarity=0.126 Sum_probs=76.2
Q ss_pred CceEEeecccceeecCCC---cccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEe
Q psy11202 138 KKLLVLDIDYTLFDHRSA---AEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVD 213 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~---~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~ 213 (360)
.+++++|+||||+++... .........|...++|+.+.+ ++.++|.|+++..++..+++.+|+... | +
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------~--~ 80 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------Y--T 80 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------E--E
T ss_pred eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------c--c
Confidence 578999999999975421 111223457888999999987 799999999999999999999976421 1 1
Q ss_pred cCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 214 YSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 214 ~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
. .+-....++ .+-+.+ + .+++++++|+|++....+....|+.+.
T Consensus 81 ~--------~kp~~~~~~---~~~~~~-~-~~~~~~~~vGD~~~Di~~a~~ag~~~~ 124 (162)
T 2p9j_A 81 G--------SYKKLEIYE---KIKEKY-S-LKDEEIGFIGDDVVDIEVMKKVGFPVA 124 (162)
T ss_dssp C--------C--CHHHHH---HHHHHT-T-CCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred C--------CCCCHHHHH---HHHHHc-C-CCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 1 000000011 111111 2 466899999999988877777888754
No 118
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.05 E-value=6.4e-06 Score=71.49 Aligned_cols=100 Identities=11% Similarity=0.137 Sum_probs=63.9
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCcee-ecccc-cCcceeeechhhcc
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMIS-VHLPK-YGVVEVKPLGVIWG 238 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~-~~~~~-~g~~~~KdL~~l~~ 238 (360)
..+|++.++|+.+.+ ++.++|.|++...++..+++.+|+.....+...++++.+..+. ..... .....++-+...+.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 378999999999987 7999999999999999999999875322222223333332221 11111 01112333333322
Q ss_pred cCCCCCCCCcEEEEeCCchhhccCCCCee
Q psy11202 239 KFPSLYNPTNTIMFDDIRRNFLMNPRNGL 267 (360)
Q Consensus 239 ~~~~~~~~~ntIivDD~~~~~~~~p~Ngi 267 (360)
.++++|++|.|+..-..+- ..|+
T Consensus 162 -----~~~~~~~~vGD~~~Di~~~-~~G~ 184 (219)
T 3kd3_A 162 -----LIDGEVIAIGDGYTDYQLY-EKGY 184 (219)
T ss_dssp -----GCCSEEEEEESSHHHHHHH-HHTS
T ss_pred -----CCCCCEEEEECCHhHHHHH-hCCC
Confidence 4568999999998877764 4444
No 119
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.05 E-value=1.9e-06 Score=75.33 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=82.8
Q ss_pred CCceEEeecccceeecCCC-------------c-----------------------c----cceeecCccHHHHHHHHhc
Q psy11202 137 GKKLLVLDIDYTLFDHRSA-------------A-----------------------E----QGYELMRPYLHEFLTSAYK 176 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~-------------~-----------------------~----~~~~~~RP~l~eFL~~l~~ 176 (360)
..++++|||||||+++... . + .......|++.++|+.+.+
T Consensus 5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 84 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAG 84 (205)
T ss_dssp GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHHH
T ss_pred cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHh
Confidence 4579999999999986420 0 0 1235679999999999987
Q ss_pred -CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----ccCCCCCCCCcEEE
Q psy11202 177 -NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW----GKFPSLYNPTNTIM 251 (360)
Q Consensus 177 -~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~----~~~~~~~~~~ntIi 251 (360)
++.++|.|++...++..+++.+|+...+... .++..+ .+ ..|+-...+ ..+ + .++++|++
T Consensus 85 ~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--~i~~~~---------~~--~~kp~~~~~~~~~~~~-g-~~~~~~i~ 149 (205)
T 3m9l_A 85 RGYRLGILTRNARELAHVTLEAIGLADCFAEA--DVLGRD---------EA--PPKPHPGGLLKLAEAW-D-VSPSRMVM 149 (205)
T ss_dssp TTCEEEEECSSCHHHHHHHHHHTTCGGGSCGG--GEECTT---------TS--CCTTSSHHHHHHHHHT-T-CCGGGEEE
T ss_pred cCCeEEEEeCCchHHHHHHHHHcCchhhcCcc--eEEeCC---------CC--CCCCCHHHHHHHHHHc-C-CCHHHEEE
Confidence 6999999999999999999999876543100 111111 11 123222222 222 3 56799999
Q ss_pred EeCCchhhccCCCCeeEecccc
Q psy11202 252 FDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 252 vDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
|+|+.....+....|+...-+.
T Consensus 150 iGD~~~Di~~a~~aG~~~i~v~ 171 (205)
T 3m9l_A 150 VGDYRFDLDCGRAAGTRTVLVN 171 (205)
T ss_dssp EESSHHHHHHHHHHTCEEEECS
T ss_pred ECCCHHHHHHHHHcCCEEEEEe
Confidence 9999988877777777544443
No 120
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.03 E-value=1.6e-06 Score=76.98 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=66.8
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
...|++.++|+.+.+ ++.++|.|++...+++.+++.+|+..++.. ++..+. .+ ..|+-..++
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~----~~~~~~--------~~--~~kp~~~~~~~~ 169 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV----IAGDDS--------VE--RGKPHPDMALHV 169 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE----EECTTT--------SS--SCTTSSHHHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee----EEeCCC--------CC--CCCCCHHHHHHH
Confidence 478999999999988 699999999999999999999987655432 222211 11 123222221
Q ss_pred -ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+.+ + .++++|++|+|+.....+....|+....+
T Consensus 170 ~~~l-g-~~~~~~i~vGD~~~Di~~a~~aG~~~i~v 203 (237)
T 4ex6_A 170 ARGL-G-IPPERCVVIGDGVPDAEMGRAAGMTVIGV 203 (237)
T ss_dssp HHHH-T-CCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred HHHc-C-CCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 111 2 56799999999998888887888855444
No 121
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.02 E-value=3.2e-06 Score=74.07 Aligned_cols=101 Identities=13% Similarity=0.036 Sum_probs=66.1
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEe-cCCceeec-ccccCcceeeechhhc
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVD-YSAMISVH-LPKYGVVEVKPLGVIW 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~-~~~~~~~~-~~~~g~~~~KdL~~l~ 237 (360)
...+|++.++|+.+.+ ++.++|.|++...+++.+++.+|+.... ..++. .+..++.. ....+ ..|+=...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~~~~~~~~~~--~~k~k~~~~ 147 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF----SNTLIVENDALNGLVTGHMM--FSHSKGEML 147 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE----EEEEEEETTEEEEEEEESCC--STTHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc----cceeEEeCCEEEeeeccCCC--CCCChHHHH
Confidence 4579999999999998 6999999999999999999999875432 22211 11111100 00011 012112222
Q ss_pred ----ccCCCCCCCCcEEEEeCCchhhccCCCCeeEe
Q psy11202 238 ----GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRI 269 (360)
Q Consensus 238 ----~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I 269 (360)
..+ + .+++++++|+|++....+....|+.+
T Consensus 148 ~~~~~~~-g-~~~~~~i~vGDs~~Di~~a~~aG~~~ 181 (217)
T 3m1y_A 148 LVLQRLL-N-ISKTNTLVVGDGANDLSMFKHAHIKI 181 (217)
T ss_dssp HHHHHHH-T-CCSTTEEEEECSGGGHHHHTTCSEEE
T ss_pred HHHHHHc-C-CCHhHEEEEeCCHHHHHHHHHCCCeE
Confidence 111 2 56799999999999888888888876
No 122
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=97.98 E-value=1.5e-06 Score=79.15 Aligned_cols=94 Identities=20% Similarity=0.158 Sum_probs=64.2
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhccc-
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGK- 239 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~- 239 (360)
...|++.++|+.+.+ ++.+++-|++ ..+..+++.+|+..++.. ++.. ...+ ..|+-+.++..
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~Fd~----i~~~--------~~~~--~~KP~p~~~~~a 179 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDKFDF----IADA--------GKCK--NNKPHPEIFLMS 179 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGGCSE----ECCG--------GGCC--SCTTSSHHHHHH
T ss_pred ccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccccce----eecc--------cccC--CCCCcHHHHHHH
Confidence 357999999999987 7787775443 567889999998765432 2221 1122 24555554421
Q ss_pred --CCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 240 --FPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 240 --~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ .+|++||+|+|++.........|+...-+
T Consensus 180 ~~~lg-~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 213 (250)
T 4gib_A 180 AKGLN-VNPQNCIGIEDASAGIDAINSANMFSVGV 213 (250)
T ss_dssp HHHHT-CCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred HHHhC-CChHHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 112 56799999999999888888888876655
No 123
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.98 E-value=3.8e-06 Score=80.31 Aligned_cols=148 Identities=13% Similarity=0.118 Sum_probs=91.3
Q ss_pred HHhhHHhhhhcccc--CCCCCCCCceEEeecccceeecCCC---------------------------------------
Q psy11202 117 AKIDKRIQDYQIDI--LNEPRPGKKLLVLDIDYTLFDHRSA--------------------------------------- 155 (360)
Q Consensus 117 ~kl~~ri~~y~i~i--~~~~~~~kk~LVLDLD~TLv~~~~~--------------------------------------- 155 (360)
..+++.+....+.+ .+...+.+++++||+||||+++...
T Consensus 85 ~~~~~~~~~~~~d~~~~~~~~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~ 164 (317)
T 4eze_A 85 RYLRELSLQWQFDFFIKPQPLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLK 164 (317)
T ss_dssp HHHHHHHHHTTCEEEECCSSCCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT
T ss_pred HHHHHHhhccCCCEEeccccCCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhc
Confidence 34444444444433 3334457899999999999986520
Q ss_pred cc--------cceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccC
Q psy11202 156 AE--------QGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYG 226 (360)
Q Consensus 156 ~~--------~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g 226 (360)
.. ...+..+|++.++|+.+.+ ++.++|-|++...+++.+++.+|+.......+.+ +.+.....-....+
T Consensus 165 ~~~~~~i~~~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~--~dg~~tg~i~~~~~ 242 (317)
T 4eze_A 165 GTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEI--RDNVLTDNITLPIM 242 (317)
T ss_dssp TCBHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEE--ETTEEEEEECSSCC
T ss_pred CCCHHHHHHHHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEe--eCCeeeeeEecccC
Confidence 00 0135689999999999987 7999999999999999999999875322111111 11111000000001
Q ss_pred cceeeechhhc----ccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 227 VVEVKPLGVIW----GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 227 ~~~~KdL~~l~----~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
.-|+=..++ +.+ + .+++++++|.|++....+....|+.+.
T Consensus 243 --~~kpkp~~~~~~~~~l-g-v~~~~~i~VGDs~~Di~aa~~AG~~va 286 (317)
T 4eze_A 243 --NAANKKQTLVDLAARL-N-IATENIIACGDGANDLPMLEHAGTGIA 286 (317)
T ss_dssp --CHHHHHHHHHHHHHHH-T-CCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred --CCCCCHHHHHHHHHHc-C-CCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence 113222222 111 2 466899999999988887777787553
No 124
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.97 E-value=2.7e-06 Score=76.05 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=62.8
Q ss_pred cCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 163 MRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 163 ~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
..|++.++|+.+.+ ++.++|.|++...++..+++.+|+...+.. ++..+ ..+ ..|+-..++
T Consensus 106 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~Kp~~~~~~~~~ 171 (240)
T 2no4_A 106 AYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS----CLSAD--------DLK--IYKPDPRIYQFAC 171 (240)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----EEEGG--------GTT--CCTTSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE----EEEcc--------ccC--CCCCCHHHHHHHH
Confidence 45999999999987 799999999999999999999987654432 11111 111 123322222
Q ss_pred ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecc
Q psy11202 238 GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRP 271 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~ 271 (360)
..+ + .++++|++|+|++....+....|+.+.-
T Consensus 172 ~~~-~-~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 172 DRL-G-VNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp HHH-T-CCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHc-C-CCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 111 2 5678999999998777666666755433
No 125
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.97 E-value=4.6e-06 Score=73.42 Aligned_cols=96 Identities=18% Similarity=0.120 Sum_probs=67.2
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+|+..++... +..+ ..+ ..|+=...+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~----~~~~--------~~~--~~kp~~~~~~~ 155 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINI----VTRD--------DVS--YGKPDPDLFLA 155 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCE----ECGG--------GSS--CCTTSTHHHHH
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhee----eccc--------cCC--CCCCChHHHHH
Confidence 5678999999999987 6999999999999999999999876554321 1111 111 123222222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|+.....+....|+...-+
T Consensus 156 ~~~~l-~-~~~~~~i~iGD~~~Di~~a~~aG~~~i~v 190 (233)
T 3s6j_A 156 AAKKI-G-APIDECLVIGDAIWDMLAARRCKATGVGL 190 (233)
T ss_dssp HHHHT-T-CCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred HHHHh-C-CCHHHEEEEeCCHHhHHHHHHCCCEEEEE
Confidence 222 2 56799999999998888877778754444
No 126
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.97 E-value=1.7e-06 Score=75.59 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=66.0
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHH------hCCCCCCCceEEEEEecCCceeecccccCcceeeechh
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKL------LGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGV 235 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~------L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~ 235 (360)
...|++.++|+.+.+++.++|.|++...++..+++. +++...... ++..+ ..+ ..|+-..
T Consensus 89 ~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~----~~~~~--------~~~--~~Kp~~~ 154 (211)
T 2i6x_A 89 EISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDK----VYASC--------QMG--KYKPNED 154 (211)
T ss_dssp EECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSE----EEEHH--------HHT--CCTTSHH
T ss_pred ccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCe----EEeec--------ccC--CCCCCHH
Confidence 567999999999988999999999999999998887 555433321 11111 111 1233222
Q ss_pred hc----ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 236 IW----GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 236 l~----~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
++ ..+ + .++++|++|+|++....+....|+.+.-+.
T Consensus 155 ~~~~~~~~~-~-~~~~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 155 IFLEMIADS-G-MKPEETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp HHHHHHHHH-C-CCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHh-C-CChHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 22 111 2 567999999999999888888888776664
No 127
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.96 E-value=5.7e-06 Score=74.10 Aligned_cols=96 Identities=10% Similarity=0.032 Sum_probs=66.6
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCC--CceEEEEEecCCceeecccccCcceeeechhhc
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNP--NYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~--~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~ 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++. ++...+ ... +..+. .+ ..|+-...+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i----~~~~~--------~~--~~kp~~~~~ 172 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELM----VTAFD--------VK--YGKPNPEPY 172 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGE----ECTTT--------CS--SCTTSSHHH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceE----EeHHh--------CC--CCCCChHHH
Confidence 4568999999999987 699999999999999999988 776554 221 11111 11 123322222
Q ss_pred ----ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 ----GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ----~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
+.+ + .++++||+|+|++....+....|+...-+.
T Consensus 173 ~~~~~~l-g-~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 210 (243)
T 3qxg_A 173 LMALKKG-G-LKADEAVVIENAPLGVEAGHKAGIFTIAVN 210 (243)
T ss_dssp HHHHHHT-T-CCGGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHc-C-CCHHHeEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 222 3 567999999999988888888887655543
No 128
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.96 E-value=4.2e-06 Score=74.68 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=67.5
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
...+|++.++|+.+.+ ++.++|.|++...+++.+++.+|+...+...+ ..+. .+ ..|+-..++
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~----~~~~--------~~--~~kp~~~~~~~ 174 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIA----GSNL--------DG--TRVNKNEVIQY 174 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE----EECT--------TS--CCCCHHHHHHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEE----eccc--------cC--CCCCCHHHHHH
Confidence 4689999999999988 69999999999999999999998865543221 1111 11 123322222
Q ss_pred --ccCCCCCC-CCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYN-PTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~-~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .+ +++|++|+|++....+....|+...-+
T Consensus 175 ~~~~~-g-~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v 210 (240)
T 3sd7_A 175 VLDLC-N-VKDKDKVIMVGDRKYDIIGAKKIGIDSIGV 210 (240)
T ss_dssp HHHHH-T-CCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHHc-C-CCCCCcEEEECCCHHHHHHHHHCCCCEEEE
Confidence 111 2 45 789999999998888777778754444
No 129
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.95 E-value=3.5e-06 Score=74.71 Aligned_cols=95 Identities=9% Similarity=0.029 Sum_probs=63.8
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
...|++.++|+.+.+ ++.++|.|++...++..+++.+++...+.. ++..+ ..+ ..|+-..++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~Kp~~~~~~~~ 160 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH----LLSVD--------PVQ--VYKPDNRVYELA 160 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----EEESG--------GGT--CCTTSHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe----EEEec--------ccC--CCCCCHHHHHHH
Confidence 456999999999987 799999999999999999999987654432 11111 111 123332222
Q ss_pred -ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|+.....+....|+.+.-+
T Consensus 161 ~~~~-~-~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 194 (232)
T 1zrn_A 161 EQAL-G-LDRSAILFVASNAWDATGARYFGFPTCWI 194 (232)
T ss_dssp HHHH-T-SCGGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred HHHc-C-CCcccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 111 2 46789999999997666665666654443
No 130
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.94 E-value=5.7e-06 Score=73.31 Aligned_cols=105 Identities=13% Similarity=0.099 Sum_probs=64.6
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEE--EecCCcee-ecccccC-cceeeec--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFY--VDYSAMIS-VHLPKYG-VVEVKPL-- 233 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~v--l~~~~~~~-~~~~~~g-~~~~KdL-- 233 (360)
...+|++.++|+.+.+ ++.++|.|++...+++.+++.+|+..+ ..+..+ ++.+..+. ......+ ...-|+-
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 3568999999999987 799999999999999999999987531 112111 11111111 0000000 0012431
Q ss_pred hhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 234 GVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 234 ~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+-.. ++.+++++|+|++....+....|+ ...|
T Consensus 163 ~~~~~~----~~~~~~~~vGDs~~Di~~a~~ag~-~i~~ 196 (225)
T 1nnl_A 163 KLLKEK----FHFKKIIMIGDGATDMEACPPADA-FIGF 196 (225)
T ss_dssp HHHHHH----HCCSCEEEEESSHHHHTTTTTSSE-EEEE
T ss_pred HHHHHH----cCCCcEEEEeCcHHhHHHHHhCCe-EEEe
Confidence 111122 223789999999998888888888 4445
No 131
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=97.94 E-value=1.2e-05 Score=71.31 Aligned_cols=116 Identities=11% Similarity=0.021 Sum_probs=73.2
Q ss_pred CCCceEEeecccceeecCCCccc------ceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceE
Q psy11202 136 PGKKLLVLDIDYTLFDHRSAAEQ------GYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKI 208 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~~~~------~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i 208 (360)
+..+.++|||||||++....... ......||+.++|++|.+ +|.++|-|+.....+..++ + ..+...+
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~ 78 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMI 78 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCE
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEE
Confidence 46789999999999984321111 123567999999999986 8999999999888774433 2 1122111
Q ss_pred EEEEecCCceeecccccCcceeeechhhc----ccCCCCCC-CCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 209 AFYVDYSAMISVHLPKYGVVEVKPLGVIW----GKFPSLYN-PTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 209 ~~vl~~~~~~~~~~~~~g~~~~KdL~~l~----~~~~~~~~-~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ ..+ .-|+-..++ ..+ + .. ++++|+|.|++.-.......|+...-+
T Consensus 79 ----~~~--------~~~--~~KP~p~~~~~a~~~l-~-~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v 131 (196)
T 2oda_A 79 ----AAP--------RPT--AGWPQPDACWMALMAL-N-VSQLEGCVLISGDPRLLQSGLNAGLWTIGL 131 (196)
T ss_dssp ----ECC--------CCS--SCTTSTHHHHHHHHHT-T-CSCSTTCEEEESCHHHHHHHHHHTCEEEEE
T ss_pred ----ECC--------cCC--CCCCChHHHHHHHHHc-C-CCCCccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 111 111 234443332 111 2 23 378999999998887777778765544
No 132
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.93 E-value=4.7e-06 Score=73.35 Aligned_cols=96 Identities=10% Similarity=0.012 Sum_probs=66.0
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+|+..++.. ++..+ ..+ ..|+-...+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~kp~~~~~~~ 160 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH----LISVD--------EVR--LFKPHQKVYEL 160 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE----EEEGG--------GTT--CCTTCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce----eEehh--------hcc--cCCCChHHHHH
Confidence 3458999999999987 699999999999999999999987655432 11111 111 123322222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+.+ + .++++|++|+|+.....+....|+.+.-+
T Consensus 161 ~~~~~-~-~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 195 (230)
T 3um9_A 161 AMDTL-H-LGESEILFVSCNSWDATGAKYFGYPVCWI 195 (230)
T ss_dssp HHHHH-T-CCGGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred HHHHh-C-CCcccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 111 2 56799999999997777776667655544
No 133
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.93 E-value=1.4e-05 Score=71.12 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=63.0
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCC--CceEEEEEecCCceeecccccCcceeeechhhc
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNP--NYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~--~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~ 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++. ++...+ ...+ ..+ ..+ ..|+-..++
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~----~~~--------~~~--~~kp~~~~~ 171 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMV----TAF--------DVK--YGKPNPEPY 171 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEE----CGG--------GCS--SCTTSSHHH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEE----ecc--------cCC--CCCCCCHHH
Confidence 4567999999999987 699999999999999999998 776544 2211 111 111 123322222
Q ss_pred ----ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 ----GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ----~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + .++++||+|+|+.....+....|+.+.-+.
T Consensus 172 ~~~~~~l-g-~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 209 (247)
T 3dv9_A 172 LMALKKG-G-FKPNEALVIENAPLGVQAGVAAGIFTIAVN 209 (247)
T ss_dssp HHHHHHH-T-CCGGGEEEEECSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHc-C-CChhheEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 221 2 567999999999988888878887655443
No 134
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.90 E-value=2.7e-06 Score=74.31 Aligned_cols=96 Identities=11% Similarity=0.109 Sum_probs=66.3
Q ss_pred eecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 161 ELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
....|++.++|+.+.+.+.++|.|++...+++.+++.+|+..+ +..++..+ ..+ ..|+-...+
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~----f~~~~~~~--------~~~--~~KP~~~~~~~~ 147 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMR----MAVTISAD--------DTP--KRKPDPLPLLTA 147 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGG----EEEEECGG--------GSS--CCTTSSHHHHHH
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhh----ccEEEecC--------cCC--CCCCCcHHHHHH
Confidence 4578999999999987799999999999999999998876432 22322221 111 134332222
Q ss_pred -ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .+++++++|+|+.....+....|+.+.-+
T Consensus 148 ~~~~-~-~~~~~~i~vGD~~~Di~~a~~aG~~~~~~ 181 (209)
T 2hdo_A 148 LEKV-N-VAPQNALFIGDSVSDEQTAQAANVDFGLA 181 (209)
T ss_dssp HHHT-T-CCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHc-C-CCcccEEEECCChhhHHHHHHcCCeEEEE
Confidence 122 2 56799999999988887777778766554
No 135
>4efo_A Serine/threonine-protein kinase TBK1; ubiquitin like domain, transferase; 1.77A {Homo sapiens}
Probab=97.89 E-value=2.5e-05 Score=61.39 Aligned_cols=64 Identities=17% Similarity=0.149 Sum_probs=48.5
Q ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCC--Ccccccccc-CCCCCEEEEEcc
Q psy11202 12 NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPS--DDTKLADTN-ATDGFKLMVMGS 78 (360)
Q Consensus 12 ~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~--D~~~L~~~~-l~~g~~i~l~gs 78 (360)
.+..+.+.+.++.||..||++|++.|||||+.|+|| |.|+.+. ....-..+. -.+...|||+..
T Consensus 22 ~a~~h~v~I~~~etv~~~ke~V~eqTgIp~~~Q~LL---~eg~~l~l~p~~~a~~~p~Tt~~~Pl~L~s~ 88 (94)
T 4efo_A 22 QMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELI---YEGRRLVLEPGRLAQHFPKTTEENPIFVVSL 88 (94)
T ss_dssp TTEEEEEEEETTCBHHHHHHHHHHHHCCCGGGEEEE---ETTEEECCCTTCBGGGSCCCBTTBCEEEEEC
T ss_pred cceEEEEEeccchHHHHHHHHHHHHhCCCHHHHHHH---hCCCccccCCCCccccCCCCCCCCCEEEEec
Confidence 677899999999999999999999999999999999 8996533 222223332 234456777754
No 136
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.89 E-value=9.2e-06 Score=71.75 Aligned_cols=97 Identities=9% Similarity=-0.040 Sum_probs=66.7
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhccc
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGK 239 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~ 239 (360)
....|++.++|+.+.+ +|.++|.|++...++..+++.+|+..++.. ++..+ ..+ ..|+-..++..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~kp~~~~~~~ 163 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH----VLSVD--------AVR--LYKTAPAAYAL 163 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE----EEEGG--------GTT--CCTTSHHHHTH
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE----EEEec--------ccC--CCCcCHHHHHH
Confidence 3457999999999987 699999999999999999999987665432 11111 111 13433333211
Q ss_pred ---CCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 240 ---FPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 240 ---~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ .++++|++|+|+.....+....|+.+.-+
T Consensus 164 ~~~~~~-~~~~~~~~vGD~~~Di~~a~~~G~~~~~v 198 (233)
T 3umb_A 164 APRAFG-VPAAQILFVSSNGWDACGATWHGFTTFWI 198 (233)
T ss_dssp HHHHHT-SCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred HHHHhC-CCcccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 012 56799999999988777776777665543
No 137
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=97.86 E-value=4e-06 Score=75.05 Aligned_cols=92 Identities=14% Similarity=0.027 Sum_probs=61.3
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCC
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFP 241 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~ 241 (360)
...|++.++|+.|.+...++|-|++...++..+++.+|+..++...+.. ...+ ..+++-+..
T Consensus 96 ~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~----------~~~K--~~~~~~~~~------ 157 (231)
T 2p11_A 96 RVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLI----------YIHK--ELMLDQVME------ 157 (231)
T ss_dssp GBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE----------ESSG--GGCHHHHHH------
T ss_pred CcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe----------cCCh--HHHHHHHHh------
Confidence 4579999999999985599999999999999999999875433222110 0011 112222211
Q ss_pred CCCCCCcEEEEeCCch---hhccCCCCeeEeccc
Q psy11202 242 SLYNPTNTIMFDDIRR---NFLMNPRNGLRIRPF 272 (360)
Q Consensus 242 ~~~~~~ntIivDD~~~---~~~~~p~Ngi~I~~f 272 (360)
+ .++++||+|+|++. ........|+...-+
T Consensus 158 ~-~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v 190 (231)
T 2p11_A 158 C-YPARHYVMVDDKLRILAAMKKAWGARLTTVFP 190 (231)
T ss_dssp H-SCCSEEEEECSCHHHHHHHHHHHGGGEEEEEE
T ss_pred c-CCCceEEEEcCccchhhhhHHHHHcCCeEEEe
Confidence 1 46689999999987 555555667765444
No 138
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.85 E-value=7.3e-06 Score=72.91 Aligned_cols=92 Identities=15% Similarity=0.203 Sum_probs=63.8
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+|+...+. .++..+. .+ ..|+-..++
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~----~i~~~~~--------~~--~~Kp~~~~~~~ 147 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD----LIVGGDT--------FG--EKKPSPTPVLK 147 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTS--------SC--TTCCTTHHHHH
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe----EEEecCc--------CC--CCCCChHHHHH
Confidence 4568999999999987 69999999999999999999998754432 2222211 11 123222222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeE
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLR 268 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~ 268 (360)
+.+ + .+++++++|+|+.....+....|+.
T Consensus 148 ~~~~~-~-~~~~~~~~vGD~~~Di~~a~~aG~~ 178 (222)
T 2nyv_A 148 TLEIL-G-EEPEKALIVGDTDADIEAGKRAGTK 178 (222)
T ss_dssp HHHHH-T-CCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHh-C-CCchhEEEECCCHHHHHHHHHCCCe
Confidence 111 2 4668999999998888777667766
No 139
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.83 E-value=6.6e-06 Score=72.65 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=65.1
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
...|++.++|+.+.+.+.++|.|++...++..+++.+|+...+.. ++..+ ..+ ..|+-...+
T Consensus 103 ~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~kp~~~~~~~~~ 168 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKD----IFVSE--------DTG--FQKPMKEYFNYVF 168 (238)
T ss_dssp CBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSE----EEEGG--------GTT--SCTTCHHHHHHHH
T ss_pred CCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhhe----EEEec--------ccC--CCCCChHHHHHHH
Confidence 467999999999987799999999999999999999987655432 11111 111 123333222
Q ss_pred ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
..+.. .++++|++|+|++ ....+....|+...-+
T Consensus 169 ~~~g~-~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~ 203 (238)
T 3ed5_A 169 ERIPQ-FSAEHTLIIGDSLTADIKGGQLAGLDTCWM 203 (238)
T ss_dssp HTSTT-CCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred HHcCC-CChhHeEEECCCcHHHHHHHHHCCCEEEEE
Confidence 22211 4579999999998 6777666677754433
No 140
>3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1
Probab=97.82 E-value=5.7e-05 Score=61.62 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=64.8
Q ss_pred eEEEEEEEC-CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKWN-SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~~-g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
-|+|+|+.. |....+.|..++++..|+...++..|+++..++++ |.|..+.++.|..++++.+|++|-++-
T Consensus 40 ~I~LKV~~qdg~ev~fkIk~tt~L~KLm~aY~er~Gl~~~~irFl---FDG~rI~~~~TP~dL~MEDgD~IdV~~ 111 (115)
T 3kyd_D 40 YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFL---FEGQRIADNHTPKELGMEEEDVIEVYQ 111 (115)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHHTCCTTSEEEE---ETTEECCTTCCTTTTTCCTTCEEEEEE
T ss_pred eEEEEEEcCCCCEEEEEEccCChHHHHHHHHHHHhCCChhhEEEE---ECCeECCCCCCHHHcCCCCCCEEEEEe
Confidence 488888874 66778899999999999999999999999999999 999999999999999999999998763
No 141
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.81 E-value=3.1e-06 Score=73.73 Aligned_cols=96 Identities=9% Similarity=0.035 Sum_probs=62.3
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCC
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFP 241 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~ 241 (360)
...|++.+ |+.+.+.|.++|.|++...++..+++.+|+..++.. ++..+. .+ ..|+-..++....
T Consensus 74 ~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~----~~~~~~--------~~--~~Kp~~~~~~~~~ 138 (201)
T 2w43_A 74 KAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKG----IFSAES--------VK--EYKPSPKVYKYFL 138 (201)
T ss_dssp EECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSE----EEEGGG--------GT--CCTTCHHHHHHHH
T ss_pred ccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcE----EEehhh--------cC--CCCCCHHHHHHHH
Confidence 45789999 999975599999999999999999999987654432 111111 11 1232222221100
Q ss_pred CCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 242 SLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 242 ~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..++++++++|+|++....+....|+.+.-+
T Consensus 139 ~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~ 169 (201)
T 2w43_A 139 DSIGAKEAFLVSSNAFDVIGAKNAGMRSIFV 169 (201)
T ss_dssp HHHTCSCCEEEESCHHHHHHHHHTTCEEEEE
T ss_pred HhcCCCcEEEEeCCHHHhHHHHHCCCEEEEE
Confidence 0011488999999998887777778765544
No 142
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=97.81 E-value=6.7e-06 Score=71.24 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=64.9
Q ss_pred cCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----c
Q psy11202 163 MRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW----G 238 (360)
Q Consensus 163 ~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~----~ 238 (360)
..|++.++|+.+.+...++|.|++...++..+++.+|+...+...+. .+ ..+ ..|+-..++ .
T Consensus 87 ~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~----~~--------~~~--~~Kp~~~~~~~~~~ 152 (200)
T 3cnh_A 87 PRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFT----SS--------ALG--VMKPNPAMYRLGLT 152 (200)
T ss_dssp BCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEE----HH--------HHS--CCTTCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEe----ec--------ccC--CCCCCHHHHHHHHH
Confidence 57999999999987449999999999999999999987655432211 11 111 123222222 1
Q ss_pred cCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 239 KFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 239 ~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
.+ + .++++|++|+|++....+....|+.+.-+
T Consensus 153 ~~-~-~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 153 LA-Q-VRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HH-T-CCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred Hc-C-CCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 11 2 46689999999999888877788876555
No 143
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.80 E-value=1.1e-05 Score=72.97 Aligned_cols=95 Identities=17% Similarity=0.280 Sum_probs=64.4
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
...|++.++|+.+.+ ++.++|.|++...++..+++.+|+...+. .++..+. .+ ..|+-...+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~----~~~~~~~--------~~--~~Kp~~~~~~~~ 179 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS----EMLGGQS--------LP--EIKPHPAPFYYL 179 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTT--------SS--SCTTSSHHHHHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE----EEEeccc--------CC--CCCcCHHHHHHH
Confidence 346999999999987 69999999999999999999998764432 2222221 11 123322222
Q ss_pred -ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|++....+....|+.+.-+
T Consensus 180 ~~~~-~-~~~~~~~~vGD~~~Di~~a~~aG~~~i~v 213 (243)
T 2hsz_A 180 CGKF-G-LYPKQILFVGDSQNDIFAAHSAGCAVVGL 213 (243)
T ss_dssp HHHH-T-CCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHh-C-cChhhEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 111 2 46689999999998777766667664433
No 144
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.79 E-value=1.8e-05 Score=69.76 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=68.3
Q ss_pred eecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 161 ELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
....|++.++|+.+..+|.++|.|++...++..+++.+|+...+.. ++..+ ..+ ..|+-..++
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~--~~kp~~~~~~~~ 171 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKK----IILSE--------DLG--VLKPRPEIFHFA 171 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----EEEGG--------GTT--CCTTSHHHHHHH
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhcee----EEEec--------cCC--CCCCCHHHHHHH
Confidence 3568999999999998999999999999999999999987655432 11111 111 123322222
Q ss_pred -ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPFRE 274 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f~~ 274 (360)
+.+ + .++++||+|+|++ ....+....|+.+.-+..
T Consensus 172 ~~~l-g-i~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~ 208 (240)
T 3qnm_A 172 LSAT-Q-SELRESLMIGDSWEADITGAHGVGMHQAFYNV 208 (240)
T ss_dssp HHHT-T-CCGGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred HHHc-C-CCcccEEEECCCchHhHHHHHHcCCeEEEEcC
Confidence 222 3 5679999999996 777777777877665543
No 145
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=1.2e-05 Score=70.27 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=63.5
Q ss_pred ecCccHHHHHHHHhc-C-CeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCc-ceeeechhhcc
Q psy11202 162 LMRPYLHEFLTSAYK-N-YDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGV-VEVKPLGVIWG 238 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~-yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~-~~~KdL~~l~~ 238 (360)
...|++.++|+.+.+ + +.++|.|++...++..+++.+++..++...+.. .+-.. .+.+=+..+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~------------~kpk~~~~~~~~~~l-- 170 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM------------SDKTEKEYLRLLSIL-- 170 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE------------SCCSHHHHHHHHHHH--
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec------------CCCCHHHHHHHHHHh--
Confidence 568999999999988 5 999999999999999999999876554332211 11111 111112222
Q ss_pred cCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 239 KFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 239 ~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
+ .++++|++|+|++ ....+....|+.+.-+
T Consensus 171 ---g-i~~~~~i~iGD~~~~Di~~a~~aG~~~v~v 201 (234)
T 3ddh_A 171 ---Q-IAPSELLMVGNSFKSDIQPVLSLGGYGVHI 201 (234)
T ss_dssp ---T-CCGGGEEEEESCCCCCCHHHHHHTCEEEEC
T ss_pred ---C-CCcceEEEECCCcHHHhHHHHHCCCeEEEe
Confidence 2 5679999999997 6666666667665544
No 146
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.79 E-value=1.4e-05 Score=72.37 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=64.3
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
...|++.++|+.+. ++.++|-|++...++..+++.+|+...+.. ++..+. .+ ..|+-..++
T Consensus 93 ~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~----~~~~~~--------~~--~~Kp~~~~~~~~~ 157 (253)
T 1qq5_A 93 TPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTDSFDA----VISVDA--------KR--VFKPHPDSYALVE 157 (253)
T ss_dssp CBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGGGCSE----EEEGGG--------GT--CCTTSHHHHHHHH
T ss_pred CCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchhhccE----EEEccc--------cC--CCCCCHHHHHHHH
Confidence 45699999999999 999999999999999999999987654432 111111 11 123222222
Q ss_pred ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+.+ + .++++|++|+|+.....+....|+.+.-+
T Consensus 158 ~~~-~-~~~~~~~~vGD~~~Di~~a~~aG~~~~~~ 190 (253)
T 1qq5_A 158 EVL-G-VTPAEVLFVSSNGFDVGGAKNFGFSVARV 190 (253)
T ss_dssp HHH-C-CCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred HHc-C-CCHHHEEEEeCChhhHHHHHHCCCEEEEE
Confidence 111 2 46789999999997777666677765544
No 147
>3pge_A SUMO-modified proliferating cell nuclear antigen; DNA replication, DNA binding protein; 2.80A {Saccharomyces cerevisiae}
Probab=97.77 E-value=5.1e-05 Score=67.79 Aligned_cols=69 Identities=19% Similarity=0.190 Sum_probs=65.6
Q ss_pred EEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 5 LNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 5 i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|+|+|+..|+...+.|..++++..|+...++..|+++..++++ |.|+.+.++.|..++++.+|++|-++
T Consensus 30 I~LkV~~~g~~v~fkIk~~t~l~kL~~ay~er~Gi~~~~~RF~---FdG~rI~~~~TP~dL~MEdgD~Idv~ 98 (200)
T 3pge_A 30 INLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFL---YDGIRIQADQTPEDLDMEDNDIIEAH 98 (200)
T ss_dssp EEEEEECSSCEEEEEECTTSCTHHHHHHHHHHHSSCGGGEEEE---ETTEECCTTCCTTTTTCCTTEEEEEE
T ss_pred EEEEEecCCCEEEEEEecCCHHHHHHHHHHHHhCCChhhEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEE
Confidence 8899988888889999999999999999999999999999999 99999999999999999999999776
No 148
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.76 E-value=6.4e-06 Score=74.49 Aligned_cols=98 Identities=17% Similarity=0.105 Sum_probs=67.4
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+|+...+...+. ..+ ..+ ...|+-...+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~---~~~--------~~~-~~~Kp~~~~~~~ 176 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIY---DPS--------WVG-GRGKPHPDLYTF 176 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEE---CGG--------GGT-TCCTTSSHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEE---eHh--------hcC-cCCCCChHHHHH
Confidence 4679999999999987 899999999999999999999987543322111 111 111 0123322222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++||+|+|+.....+....|+...-+
T Consensus 177 ~~~~l-g-i~~~~~i~iGD~~~Di~~a~~aG~~~i~v 211 (259)
T 4eek_A 177 AAQQL-G-ILPERCVVIEDSVTGGAAGLAAGATLWGL 211 (259)
T ss_dssp HHHHT-T-CCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHHc-C-CCHHHEEEEcCCHHHHHHHHHCCCEEEEE
Confidence 222 3 56799999999998888777778774444
No 149
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=97.75 E-value=7.2e-05 Score=74.00 Aligned_cols=105 Identities=21% Similarity=0.363 Sum_probs=71.5
Q ss_pred CCCCceEEeecccceeecCCC-c----ccceeecCccHHHHHHHHhc-CCeEEEEcCCc------------HHHHHHHHH
Q psy11202 135 RPGKKLLVLDIDYTLFDHRSA-A----EQGYELMRPYLHEFLTSAYK-NYDIAIWSATG------------MKWIEEKMK 196 (360)
Q Consensus 135 ~~~kk~LVLDLD~TLv~~~~~-~----~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~------------~~ya~~il~ 196 (360)
.+..++++||+||||+..... . ...+...-|++.++|+.|.+ +|.++|.|+.+ ..++..+++
T Consensus 55 ~~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~ 134 (416)
T 3zvl_A 55 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLE 134 (416)
T ss_dssp CCCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHH
Confidence 346799999999999976431 1 11234468999999999987 79999999966 344889999
Q ss_pred HhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcc----cCC---CCCCCCcEEEEeCCc
Q psy11202 197 LLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWG----KFP---SLYNPTNTIMFDDIR 256 (360)
Q Consensus 197 ~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~----~~~---~~~~~~ntIivDD~~ 256 (360)
.+|+. + ..++..+.+ .+.|+-..+|. .+. + .+++++++|.|+.
T Consensus 135 ~lgl~--f----d~i~~~~~~----------~~~KP~p~~~~~a~~~l~~~~~-v~~~~~l~VGDs~ 184 (416)
T 3zvl_A 135 KLGVP--F----QVLVATHAG----------LNRKPVSGMWDHLQEQANEGIP-ISVEDSVFVGDAA 184 (416)
T ss_dssp HHTSC--C----EEEEECSSS----------TTSTTSSHHHHHHHHHSSTTCC-CCGGGCEEECSCS
T ss_pred HcCCC--E----EEEEECCCC----------CCCCCCHHHHHHHHHHhCCCCC-CCHHHeEEEECCC
Confidence 99873 1 122222211 22466555542 221 2 5779999999996
No 150
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.74 E-value=2e-05 Score=68.66 Aligned_cols=96 Identities=15% Similarity=0.045 Sum_probs=64.6
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeee----chh
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKP----LGV 235 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~Kd----L~~ 235 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+++..... .++..+ ..+ ..|+ +..
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------~~~--~~k~~~~~~~~ 153 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD----IIIGGE--------DVT--HHKPDPEGLLL 153 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS----EEECGG--------GCS--SCTTSTHHHHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee----eeeehh--------hcC--CCCCChHHHHH
Confidence 3457999999999986 79999999999999999999887654332 111111 111 1122 112
Q ss_pred hcccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 236 IWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 236 l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+-..+ + .++++|++|+|+.....+-...|+.+.-+
T Consensus 154 ~~~~~-~-~~~~~~i~iGD~~nDi~~~~~aG~~~~~~ 188 (225)
T 3d6j_A 154 AIDRL-K-ACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188 (225)
T ss_dssp HHHHT-T-CCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHHh-C-CChHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 22222 2 56789999999998887777777765554
No 151
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=97.74 E-value=2.6e-05 Score=66.12 Aligned_cols=109 Identities=17% Similarity=0.033 Sum_probs=74.1
Q ss_pred CCceEEeecccceeecCCC---c--ccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEE
Q psy11202 137 GKKLLVLDIDYTLFDHRSA---A--EQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAF 210 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~---~--~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~ 210 (360)
..++++||+||||++.... . ....+..++++ .|+.+.+ ++.++|.|+.+..+++.+++.+|+... |
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------~ 74 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------F 74 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------E
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------e
Confidence 4579999999999985411 1 11223344443 6888886 799999999999999999999976421 1
Q ss_pred EEecCCceeecccccCcceeeechhhc----ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 211 YVDYSAMISVHLPKYGVVEVKPLGVIW----GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 211 vl~~~~~~~~~~~~~g~~~~KdL~~l~----~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+. .|+=...+ ..+ + .++++|++|.|+..-..+-...|+.+...
T Consensus 75 --~~---------------~kpk~~~~~~~~~~~-~-~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 121 (164)
T 3e8m_A 75 --QG---------------VVDKLSAAEELCNEL-G-INLEQVAYIGDDLNDAKLLKRVGIAGVPA 121 (164)
T ss_dssp --CS---------------CSCHHHHHHHHHHHH-T-CCGGGEEEECCSGGGHHHHTTSSEEECCT
T ss_pred --cc---------------cCChHHHHHHHHHHc-C-CCHHHEEEECCCHHHHHHHHHCCCeEEcC
Confidence 10 12211111 111 2 45689999999998888888888876654
No 152
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=97.74 E-value=2.4e-05 Score=68.61 Aligned_cols=112 Identities=21% Similarity=0.083 Sum_probs=72.7
Q ss_pred CCceEEeecccceeecCCCc-c----cceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEE
Q psy11202 137 GKKLLVLDIDYTLFDHRSAA-E----QGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAF 210 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~-~----~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~ 210 (360)
..++++||+||||+++.... . ...+..+++. +|+.|.+ ++.++|-|+.....++.+++.+|+....
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f------ 89 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLF------ 89 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEE------
T ss_pred hCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHH--HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHh------
Confidence 45799999999999874210 0 1123334443 8899987 8999999999999999999999874211
Q ss_pred EEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEecc
Q psy11202 211 YVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRP 271 (360)
Q Consensus 211 vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~ 271 (360)
+. + .++ ...++.+. ..+ + .+++++++|.|+..-..+-...|+.+..
T Consensus 90 --~~--~----~~K--~~~~~~~~---~~~-g-~~~~~~~~vGD~~nDi~~~~~ag~~~~~ 135 (189)
T 3mn1_A 90 --QG--R----EDK--LVVLDKLL---AEL-Q-LGYEQVAYLGDDLPDLPVIRRVGLGMAV 135 (189)
T ss_dssp --CS--C----SCH--HHHHHHHH---HHH-T-CCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --cC--c----CCh--HHHHHHHH---HHc-C-CChhHEEEECCCHHHHHHHHHCCCeEEe
Confidence 10 0 000 01111111 111 2 4568999999999877777677776543
No 153
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.72 E-value=3.8e-06 Score=74.77 Aligned_cols=96 Identities=17% Similarity=0.092 Sum_probs=65.3
Q ss_pred cCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHh------CCCCCCCceEEEEEecCCceeecccccCcceeeechhh
Q psy11202 163 MRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLL------GVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVI 236 (360)
Q Consensus 163 ~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L------~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l 236 (360)
..|++.++|+.+.+.|.++|.|++...++..+++.| ++..++. .++..+ ..+ ..|+-..+
T Consensus 113 ~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd----~i~~~~--------~~~--~~KP~~~~ 178 (229)
T 4dcc_A 113 IPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFE----KTYLSY--------EMK--MAKPEPEI 178 (229)
T ss_dssp CCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCS----EEEEHH--------HHT--CCTTCHHH
T ss_pred ccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCC----EEEeec--------ccC--CCCCCHHH
Confidence 469999999999988999999999999999877554 3322222 111111 111 23543333
Q ss_pred cc----cCCCCCCCCcEEEEeCCchhhccCCCCeeEeccccc
Q psy11202 237 WG----KFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFRE 274 (360)
Q Consensus 237 ~~----~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~~ 274 (360)
+. .+ + .++++||+|+|++....+....|+.+.-+..
T Consensus 179 ~~~~~~~~-g-~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 179 FKAVTEDA-G-IDPKETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp HHHHHHHH-T-CCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred HHHHHHHc-C-CCHHHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 31 11 2 5679999999999888888888988766643
No 154
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=97.70 E-value=0.00015 Score=62.29 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=23.4
Q ss_pred eecCccHHHHHHHHhcCCeEEEEcCC
Q psy11202 161 ELMRPYLHEFLTSAYKNYDIAIWSAT 186 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~~yeivIwTas 186 (360)
....||+.++|+.|.+.|.++|-|++
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~ 93 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAA 93 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCC
Confidence 34579999999999988999999998
No 155
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=97.70 E-value=2.8e-05 Score=69.02 Aligned_cols=110 Identities=21% Similarity=0.227 Sum_probs=73.3
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHH-------HHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceE
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEF-------LTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKI 208 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eF-------L~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i 208 (360)
+.++++||+||||++... +....+|.+.+| |+.|.+ ++.++|-|+.+...+..+++.+|+...
T Consensus 24 ~ik~vifD~DGtL~d~~~----~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~----- 94 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLI----YMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGISLI----- 94 (195)
T ss_dssp TCCEEEECSTTTTSCSCC----EECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEE-----
T ss_pred CCCEEEEcCCCCcCCCcE----EEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEE-----
Confidence 467999999999998532 111123455556 999987 899999999999999999999976421
Q ss_pred EEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEecc
Q psy11202 209 AFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRP 271 (360)
Q Consensus 209 ~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~ 271 (360)
| +. .+.....++.+- ..+ + .++++|++|.|+..-..+-...|+.+..
T Consensus 95 -~--~~--------~k~k~~~~~~~~---~~~-~-~~~~~~~~vGD~~nDi~~~~~ag~~va~ 141 (195)
T 3n07_A 95 -Y--QG--------QDDKVQAYYDIC---QKL-A-IAPEQTGYIGDDLIDWPVMEKVALRVCV 141 (195)
T ss_dssp -E--CS--------CSSHHHHHHHHH---HHH-C-CCGGGEEEEESSGGGHHHHTTSSEEEEC
T ss_pred -e--eC--------CCCcHHHHHHHH---HHh-C-CCHHHEEEEcCCHHHHHHHHHCCCEEEE
Confidence 1 10 000001111111 111 2 4668999999999888777777877654
No 156
>3tix_A Ubiquitin-like protein SMT3, RNA-induced transcri silencing complex protein TAS3; PIN, rossmann fold, SPOC, alpha-helical hairpin, heterochrom silencing, RITS, RNAI, argonaute; 2.90A {Saccharomyces cerevisiae}
Probab=97.69 E-value=6.1e-05 Score=66.47 Aligned_cols=72 Identities=18% Similarity=0.164 Sum_probs=66.9
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
-|+|+|+-.|....+.|..++++..|+...++..|+++..++++ |.|..+.++.|..++++.+|++|-++-.
T Consensus 57 ~InLKVk~dG~eV~FKIKrtTpL~KLmeAYcERqGL~~~sIRFL---FDGqRI~~ddTPeDLdMEDGDtIDV~le 128 (207)
T 3tix_A 57 HINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLTFL---YDGIEIQADQTPEDLDMEDNDIIEAHRE 128 (207)
T ss_dssp EEEEEEECSSCEEEEEEETTSCTHHHHHHHHHHTTCCGGGSCEE---ETTEECCSSCCTTTTTCCTTEEEEECCC
T ss_pred cEEEEEecCCCEEEEEEccCChHHHHHHHHHHHhCCCcccEEEE---ECCeecCCCCCHHHcCCCCCCEEEEEEe
Confidence 38888888888889999999999999999999999999999999 9999999999999999999999988733
No 157
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.68 E-value=1.3e-05 Score=72.00 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=63.8
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH-hCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc-
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL-LGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~-L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++...+.. +++...+.. ++..+. ...+ ..|+-..++
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~----~~~~~~------~~~~--~~Kp~~~~~~ 178 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSH----IVLGDD------PEVQ--HGKPDPDIFL 178 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSC----EECTTC------TTCC--SCTTSTHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheee----EEecch------hhcc--CCCCChHHHH
Confidence 4578999999999988 699999999998888776643 344433321 111110 0111 134433332
Q ss_pred ---ccCCCCCCC--CcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 ---GKFPSLYNP--TNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ---~~~~~~~~~--~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + .++ ++||+|+|+.....+....|+.+.-+.
T Consensus 179 ~~~~~l-g-i~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 217 (250)
T 3l5k_A 179 ACAKRF-S-PPPAMEKCLVFEDAPNGVEAALAAGMQVVMVP 217 (250)
T ss_dssp HHHHTS-S-SCCCGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred HHHHHc-C-CCCCcceEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 222 2 445 999999999988888888887655553
No 158
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.68 E-value=2.2e-05 Score=69.16 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=64.1
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
...|++.++|+.+.+.+.++|.|++...++..+++.+|+...+... +..+ ..+ ..|+-..++
T Consensus 100 ~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~----~~~~--------~~~--~~kp~~~~~~~~~ 165 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSI----TTSE--------EAG--FFKPHPRIFELAL 165 (234)
T ss_dssp CBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEE----EEHH--------HHT--BCTTSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHccee----Eecc--------ccC--CCCcCHHHHHHHH
Confidence 4679999999999877999999999999999999999876544321 1111 111 123322222
Q ss_pred ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|++ .-..+....|+.+.-+
T Consensus 166 ~~~-~-~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v 199 (234)
T 3u26_A 166 KKA-G-VKGEEAVYVGDNPVKDCGGSKNLGMTSILL 199 (234)
T ss_dssp HHH-T-CCGGGEEEEESCTTTTHHHHHTTTCEEEEE
T ss_pred HHc-C-CCchhEEEEcCCcHHHHHHHHHcCCEEEEE
Confidence 221 2 5679999999998 5566666777544443
No 159
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.68 E-value=1.8e-05 Score=70.23 Aligned_cols=104 Identities=10% Similarity=-0.015 Sum_probs=61.2
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeec--ccccCcceeee--chhh
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVH--LPKYGVVEVKP--LGVI 236 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~--~~~~g~~~~Kd--L~~l 236 (360)
..+|++.++|+.+.+ ++.++|-|++...+++.+++.+|+.......+.+ ..+.+.... ...++. -|. +..+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~g~~~~~~~~~~--~K~~~~~~~ 167 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEY--RDGRYTGRIEGTPSFRE--GKVVRVNQW 167 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEE--ETTEEEEEEESSCSSTH--HHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEE--ECCEEeeeecCCCCcch--HHHHHHHHH
Confidence 458999999999987 7999999999999999999999874211111111 111111000 000110 111 1111
Q ss_pred cccCCC-CCCCCcEEEEeCCchhhccCCCCeeEe
Q psy11202 237 WGKFPS-LYNPTNTIMFDDIRRNFLMNPRNGLRI 269 (360)
Q Consensus 237 ~~~~~~-~~~~~ntIivDD~~~~~~~~p~Ngi~I 269 (360)
-..+.. ..++++|++|.|+..-..+-...|+.+
T Consensus 168 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 201 (232)
T 3fvv_A 168 LAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPI 201 (232)
T ss_dssp HHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred HHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence 111110 024689999999998776665666655
No 160
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=97.68 E-value=3.8e-05 Score=68.01 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=59.7
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF 240 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~ 240 (360)
...|++.++|+.+.+ +|.++|.|++.. ++..+++.+|+..++...+ ..+ ..+ ..|+-..++...
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~----~~~--------~~~--~~Kp~~~~~~~~ 159 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALA----LSY--------EIK--AVKPNPKIFGFA 159 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-------------------------CCHHHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEE----ecc--------ccC--CCCCCHHHHHHH
Confidence 567999999999998 799999999976 6899999998865543211 111 111 134433333111
Q ss_pred CCCCCCCcEEEEeCCch-hhccCCCCeeEecccc
Q psy11202 241 PSLYNPTNTIMFDDIRR-NFLMNPRNGLRIRPFR 273 (360)
Q Consensus 241 ~~~~~~~ntIivDD~~~-~~~~~p~Ngi~I~~f~ 273 (360)
...++..- ++|+|++. ........|+...-+.
T Consensus 160 ~~~~~~~~-~~vgD~~~~Di~~a~~aG~~~i~v~ 192 (220)
T 2zg6_A 160 LAKVGYPA-VHVGDIYELDYIGAKRSYVDPILLD 192 (220)
T ss_dssp HHHHCSSE-EEEESSCCCCCCCSSSCSEEEEEBC
T ss_pred HHHcCCCe-EEEcCCchHhHHHHHHCCCeEEEEC
Confidence 00011122 99999998 8888888888765553
No 161
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=97.67 E-value=3.1e-05 Score=68.97 Aligned_cols=127 Identities=15% Similarity=0.144 Sum_probs=78.8
Q ss_pred CCceEEeecccceeecCCC-cccceeecCccHHHHHHHHhc-CCeEEEEcCCcH---------------HHHHHHHHHhC
Q psy11202 137 GKKLLVLDIDYTLFDHRSA-AEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGM---------------KWIEEKMKLLG 199 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~-~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~---------------~ya~~il~~L~ 199 (360)
..+++++|+||||+..... .........|++.++|+.|.+ ++.++|.|+++. .++..+++.+|
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 109 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEG 109 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence 5688999999999975321 111235568999999999986 899999999998 79999999998
Q ss_pred CCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC---CCCCCCCcEEEEeCCchhhccCCCCeeE
Q psy11202 200 VTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF---PSLYNPTNTIMFDDIRRNFLMNPRNGLR 268 (360)
Q Consensus 200 ~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~---~~~~~~~ntIivDD~~~~~~~~p~Ngi~ 268 (360)
+. ....+.+....+..+...... ...-|+-..++... .+ .+++++++|.|+..-..+....|+.
T Consensus 110 l~--~~~~~~~~~~~~g~~~~~~~~--~~~~KP~~~~~~~~~~~~~-i~~~~~~~VGD~~~Di~~a~~aG~~ 176 (218)
T 2o2x_A 110 VF--VDMVLACAYHEAGVGPLAIPD--HPMRKPNPGMLVEAGKRLA-LDLQRSLIVGDKLADMQAGKRAGLA 176 (218)
T ss_dssp CC--CSEEEEECCCTTCCSTTCCSS--CTTSTTSCHHHHHHHHHHT-CCGGGCEEEESSHHHHHHHHHTTCS
T ss_pred Cc--eeeEEEeecCCCCceeecccC--CccCCCCHHHHHHHHHHcC-CCHHHEEEEeCCHHHHHHHHHCCCC
Confidence 63 111122211100000000000 11234433333111 12 5679999999999777666666754
No 162
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.67 E-value=1.3e-05 Score=71.63 Aligned_cols=94 Identities=19% Similarity=0.161 Sum_probs=63.2
Q ss_pred cCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 163 MRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 163 ~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
..|++.++|+.+.+ ++.++|.|++...++..+++.+|+..++... +..+ ..+ ..|+-..++
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~----~~~~--------~~~--~~Kp~~~~~~~~~ 160 (241)
T 2hoq_A 95 EVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHV----IISD--------FEG--VKKPHPKIFKKAL 160 (241)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEE----EEGG--------GGT--CCTTCHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEE----EEeC--------CCC--CCCCCHHHHHHHH
Confidence 57999999999987 7999999999999999999999876544321 1111 111 123322222
Q ss_pred ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|++ .-..+....|+.+.-+
T Consensus 161 ~~~-g-~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v 194 (241)
T 2hoq_A 161 KAF-N-VKPEEALMVGDRLYSDIYGAKRVGMKTVWF 194 (241)
T ss_dssp HHH-T-CCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred HHc-C-CCcccEEEECCCchHhHHHHHHCCCEEEEE
Confidence 111 2 4668999999998 5566665667654444
No 163
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=97.66 E-value=2.9e-05 Score=68.31 Aligned_cols=109 Identities=18% Similarity=0.175 Sum_probs=71.5
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHH-------HHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceE
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEF-------LTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKI 208 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eF-------L~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i 208 (360)
+.++++||+||||++.... .....|.+.+| |+.|.+ ++.++|.|+.+...+..+++.+|+...
T Consensus 18 ~ik~vifD~DGtL~~~~~~----~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~----- 88 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLH----IDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY----- 88 (191)
T ss_dssp TCSEEEECSTTTTBCSCCE----ECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE-----
T ss_pred cCCEEEEeCCCCCCCCcee----ecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc-----
Confidence 4679999999999974321 11112444455 888887 799999999999999999999977431
Q ss_pred EEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 209 AFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 209 ~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
| +.. +.....++.+-. .+ + .++++|++|.|+..-..+-...|+.+.
T Consensus 89 -~--~~~--------kpk~~~~~~~~~---~~-~-~~~~~~~~vGD~~~Di~~~~~ag~~~~ 134 (191)
T 3n1u_A 89 -Y--KGQ--------VDKRSAYQHLKK---TL-G-LNDDEFAYIGDDLPDLPLIQQVGLGVA 134 (191)
T ss_dssp -E--CSC--------SSCHHHHHHHHH---HH-T-CCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred -e--eCC--------CChHHHHHHHHH---Hh-C-CCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence 1 100 001111111111 11 1 456899999999988877777788773
No 164
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.64 E-value=2.4e-05 Score=68.97 Aligned_cols=98 Identities=10% Similarity=0.018 Sum_probs=66.0
Q ss_pred eecCccHHHHHHHHhcC--CeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc-
Q psy11202 161 ELMRPYLHEFLTSAYKN--YDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~~--yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~- 237 (360)
....|++.++|+.+.+. +.++|.|++...++..+++.+|+...+.. +.... ..+ ...|+...++
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~----~~~~~--------~~~-~~~k~~~~~~~ 158 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF----GAFAD--------DAL-DRNELPHIALE 158 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC----EECTT--------TCS-SGGGHHHHHHH
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc----ceecC--------CCc-CccchHHHHHH
Confidence 34679999999999874 99999999999999999999987655432 11111 111 1123322222
Q ss_pred ---ccCCCC-CCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 ---GKFPSL-YNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ---~~~~~~-~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ +. .++++|++|.|++....+....|+.+..+
T Consensus 159 ~~~~~l-g~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v 196 (234)
T 2hcf_A 159 RARRMT-GANYSPSQIVIIGDTEHDIRCARELDARSIAV 196 (234)
T ss_dssp HHHHHH-CCCCCGGGEEEEESSHHHHHHHHTTTCEEEEE
T ss_pred HHHHHh-CCCCCcccEEEECCCHHHHHHHHHCCCcEEEE
Confidence 111 10 35689999999998888887888664444
No 165
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=97.63 E-value=1.5e-05 Score=69.09 Aligned_cols=114 Identities=14% Similarity=0.087 Sum_probs=75.8
Q ss_pred CCceEEeecccceeecCCCc---ccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEE
Q psy11202 137 GKKLLVLDIDYTLFDHRSAA---EQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYV 212 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~---~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl 212 (360)
..+++++|+||||+++.... ........|...++|+.+.+ ++.++|.|..+..++..+++.+|+... |
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------~-- 78 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------F-- 78 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------E--
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------e--
Confidence 35899999999999764211 11122345677899999986 799999999999999999999976421 1
Q ss_pred ecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEecc
Q psy11202 213 DYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRP 271 (360)
Q Consensus 213 ~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~ 271 (360)
+.. .++ ...++.+- ..+ + .++++|++|.|+..-..+-...|+.+..
T Consensus 79 ~~~------k~k--~~~~~~~~---~~~-~-~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 124 (180)
T 1k1e_A 79 LGK------LEK--ETACFDLM---KQA-G-VTAEQTAYIGDDSVDLPAFAACGTSFAV 124 (180)
T ss_dssp ESC------SCH--HHHHHHHH---HHH-T-CCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred cCC------CCc--HHHHHHHH---HHc-C-CCHHHEEEECCCHHHHHHHHHcCCeEEe
Confidence 110 000 11112111 111 1 4568999999999887777677777654
No 166
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=97.61 E-value=6.5e-05 Score=65.05 Aligned_cols=110 Identities=15% Similarity=0.058 Sum_probs=70.4
Q ss_pred CCceEEeecccceeecCCCc----c-cceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEE
Q psy11202 137 GKKLLVLDIDYTLFDHRSAA----E-QGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAF 210 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~----~-~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~ 210 (360)
..++++||+||||++..... . ...+..++++ +|+.+.+ ++.++|-|++...+++.+++.+|+. .+
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------~~ 81 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------VL 81 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------EE
T ss_pred cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------eE
Confidence 45799999999999833210 0 1123334444 7888876 8999999999999999999999764 11
Q ss_pred EEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 211 YVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 211 vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
+.. .++ ...++.+- ..+ + .+++++++|.|+..-..+-...|+.+.
T Consensus 82 --~~~------~~k--~~~l~~~~---~~~-~-~~~~~~~~vGD~~nD~~~~~~ag~~v~ 126 (176)
T 3mmz_A 82 --HGI------DRK--DLALKQWC---EEQ-G-IAPERVLYVGNDVNDLPCFALVGWPVA 126 (176)
T ss_dssp --ESC------SCH--HHHHHHHH---HHH-T-CCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred --eCC------CCh--HHHHHHHH---HHc-C-CCHHHEEEEcCCHHHHHHHHHCCCeEE
Confidence 110 011 11111111 111 1 456899999999887776666676553
No 167
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.61 E-value=2.3e-05 Score=77.18 Aligned_cols=131 Identities=18% Similarity=0.193 Sum_probs=84.3
Q ss_pred CCCCCceEEeecccceeecCCC----------------------cc-------------------------cceeecCcc
Q psy11202 134 PRPGKKLLVLDIDYTLFDHRSA----------------------AE-------------------------QGYELMRPY 166 (360)
Q Consensus 134 ~~~~kk~LVLDLD~TLv~~~~~----------------------~~-------------------------~~~~~~RP~ 166 (360)
.+..++++||||||||++.... .. ...+..+|+
T Consensus 181 ~~~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pg 260 (415)
T 3p96_A 181 ERRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQLELMPG 260 (415)
T ss_dssp TTTCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHHCCBCTT
T ss_pred cccCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHhCccCcc
Confidence 3557889999999999986420 00 013567999
Q ss_pred HHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeec-ccccCcceeeechhhcccC---C
Q psy11202 167 LHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVH-LPKYGVVEVKPLGVIWGKF---P 241 (360)
Q Consensus 167 l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~-~~~~g~~~~KdL~~l~~~~---~ 241 (360)
+.++|+.|.+ +|.++|.|++...+++.+++.+|+.......+.+ . +..++-. .... ...|+=..++... .
T Consensus 261 ~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~--~-dg~~tg~~~~~v--~~~kpk~~~~~~~~~~~ 335 (415)
T 3p96_A 261 ARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEI--V-DGTLTGRVVGPI--IDRAGKATALREFAQRA 335 (415)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEE--E-TTEEEEEECSSC--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEE--e-CCEEEeeEccCC--CCCcchHHHHHHHHHHc
Confidence 9999999987 6999999999999999999999874221111111 1 1111100 0000 0123322222111 1
Q ss_pred CCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 242 SLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 242 ~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
+ .++++|++|.|+.....+-...|+.+.
T Consensus 336 g-i~~~~~i~vGD~~~Di~~a~~aG~~va 363 (415)
T 3p96_A 336 G-VPMAQTVAVGDGANDIDMLAAAGLGIA 363 (415)
T ss_dssp T-CCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred C-cChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 2 567899999999988888777888664
No 168
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.61 E-value=0.00012 Score=65.72 Aligned_cols=101 Identities=12% Similarity=0.055 Sum_probs=62.7
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEe-cCCceeecccccCcc-ee-------
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVD-YSAMISVHLPKYGVV-EV------- 230 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~-~~~~~~~~~~~~g~~-~~------- 230 (360)
...+|++.++|+.|.+ +|.++|-|++...+++.+++ ++... ...+..-.. ++..++....+-... ..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K 152 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK 152 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence 4568999999999987 89999999999999999998 55433 322222110 000000000000000 01
Q ss_pred -eechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 231 -KPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 231 -KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
+-+..+ + .+++++++|+|+.....+....|+.+.
T Consensus 153 ~~~~~~~-----~-~~~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 153 PSVIHEL-----S-EPNQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp HHHHHHH-----C-CTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred HHHHHHH-----h-ccCCeEEEEeCChHHHHHHHhCCeeee
Confidence 222222 1 456899999999988888778888764
No 169
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=97.60 E-value=2.5e-05 Score=68.05 Aligned_cols=96 Identities=11% Similarity=0.119 Sum_probs=65.2
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeec----hhh
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPL----GVI 236 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL----~~l 236 (360)
...|++.++|+.+.+ ++.++|.|++...++..+++.+++...+... +..+. .+ ..|+- ..+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~----~~~~~--------~~--~~kp~~~~~~~~ 159 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL----ASAEK--------LP--YSKPHPQVYLDC 159 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE----EECTT--------SS--CCTTSTHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE----Eeccc--------cC--CCCCChHHHHHH
Confidence 457999999999987 6999999999999999999998876443221 11111 11 11211 111
Q ss_pred cccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 237 WGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 237 ~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
-..+ + .++++|++|.|+.....+-...|+.+.-+.
T Consensus 160 ~~~~-~-i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~ 194 (226)
T 1te2_A 160 AAKL-G-VDPLTCVALEDSVNGMIASKAARMRSIVVP 194 (226)
T ss_dssp HHHH-T-SCGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred HHHc-C-CCHHHeEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 1111 2 566899999999988887777787765553
No 170
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=97.60 E-value=3.5e-05 Score=69.26 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=74.5
Q ss_pred CCceEEeecccceeecCCCc-----ccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEE
Q psy11202 137 GKKLLVLDIDYTLFDHRSAA-----EQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAF 210 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~-----~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~ 210 (360)
..+++||||||||+++.... ....+..++++ +|+.|.+ ++.++|-|+.....+..+++.+|+... |
T Consensus 48 ~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~------f 119 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHL------Y 119 (211)
T ss_dssp TCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEE------E
T ss_pred CCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchh------h
Confidence 45799999999999875310 01123334444 8888887 899999999999999999999987421 1
Q ss_pred EEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 211 YVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 211 vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+. + .++ ...++.+. +.+ + .++++|++|-|+..-..+-...|+.+..-
T Consensus 120 --~~--~----k~K--~~~l~~~~---~~l-g-~~~~~~~~vGDs~nDi~~~~~ag~~~a~~ 166 (211)
T 3ij5_A 120 --QG--Q----SDK--LVAYHELL---ATL-Q-CQPEQVAYIGDDLIDWPVMAQVGLSVAVA 166 (211)
T ss_dssp --CS--C----SSH--HHHHHHHH---HHH-T-CCGGGEEEEECSGGGHHHHTTSSEEEECT
T ss_pred --cc--c----CCh--HHHHHHHH---HHc-C-cCcceEEEEcCCHHHHHHHHHCCCEEEeC
Confidence 10 0 011 11111111 111 2 45689999999998888877888876544
No 171
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.58 E-value=3.7e-05 Score=69.51 Aligned_cols=96 Identities=11% Similarity=-0.007 Sum_probs=65.4
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
...|++.++|+.+.+ +|.++|.|++...++..+++.+++.... +..+...+. .+ ..|+-...+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~---~~~~~~~~~--------~~--~~kp~~~~~~~~ 177 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT---PASTVFATD--------VV--RGRPFPDMALKV 177 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC---CSEEECGGG--------SS--SCTTSSHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC---CceEecHHh--------cC--CCCCCHHHHHHH
Confidence 568999999999987 6999999999999999999998765441 112212111 11 123222222
Q ss_pred -ccCCCCCCC-CcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 -GKFPSLYNP-TNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 -~~~~~~~~~-~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++ ++||+|+|+.....+....|+.+.-+
T Consensus 178 ~~~l-g-i~~~~~~i~vGD~~~Di~~a~~aG~~~v~v 212 (277)
T 3iru_A 178 ALEL-E-VGHVNGCIKVDDTLPGIEEGLRAGMWTVGV 212 (277)
T ss_dssp HHHH-T-CSCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred HHHc-C-CCCCccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 111 2 567 89999999998888887888754444
No 172
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.58 E-value=1.8e-05 Score=69.94 Aligned_cols=92 Identities=15% Similarity=0.180 Sum_probs=61.8
Q ss_pred cCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 163 MRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 163 ~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
..|++.++|+.+.+ ++.++|.|++.. +..+++.+|+..++.. ++..+. .+ ..|+-...+
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~----i~~~~~--------~~--~~Kp~~~~~~~~~ 156 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA----IVDPTT--------LA--KGKPDPDIFLTAA 156 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----ECCC-------------------CCHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----EeeHhh--------CC--CCCCChHHHHHHH
Confidence 58999999999998 699999999854 8899999987655432 111111 11 123222121
Q ss_pred ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++||+|.|+.....+....|+.+.-+
T Consensus 157 ~~l-g-i~~~~~i~vGDs~~Di~~a~~aG~~~~~~ 189 (233)
T 3nas_A 157 AML-D-VSPADCAAIEDAEAGISAIKSAGMFAVGV 189 (233)
T ss_dssp HHH-T-SCGGGEEEEECSHHHHHHHHHTTCEEEEC
T ss_pred HHc-C-CCHHHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 111 2 56799999999998888888888877655
No 173
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.56 E-value=1.6e-05 Score=67.90 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=60.1
Q ss_pred cCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 163 MRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 163 ~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
..|++.++|+.+.+ ++.++|.|++. .++..+++.+++... +..++..+. .+ ..|+-...+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~----f~~~~~~~~--------~~--~~kp~~~~~~~~~ 147 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAY----FTEVVTSSS--------GF--KRKPNPESMLYLR 147 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGG----EEEEECGGG--------CC--CCTTSCHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhh----eeeeeeccc--------cC--CCCCCHHHHHHHH
Confidence 68999999999987 69999999876 588999999876532 222222211 11 122222222
Q ss_pred ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .+ +|++|+|++....+....|+.+.-+
T Consensus 148 ~~~-~-~~--~~~~iGD~~~Di~~a~~aG~~~~~~ 178 (190)
T 2fi1_A 148 EKY-Q-IS--SGLVIGDRPIDIEAGQAAGLDTHLF 178 (190)
T ss_dssp HHT-T-CS--SEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHc-C-CC--eEEEEcCCHHHHHHHHHcCCeEEEE
Confidence 222 2 23 8999999998887777778766555
No 174
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=97.56 E-value=5.9e-05 Score=68.80 Aligned_cols=97 Identities=13% Similarity=0.047 Sum_probs=65.8
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
+...|++.++|+.+.+ ++.++|.|++.. .+..+++.+|+...+...+. . ...+ ..|+-..++
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~----~--------~~~~--~~Kp~~~~~~~ 169 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLT----S--------EAAG--WPKPDPRIFQE 169 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEE----H--------HHHS--SCTTSHHHHHH
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEe----e--------cccC--CCCCCHHHHHH
Confidence 3578999999999987 699999999776 57899999987655432211 1 1111 134433222
Q ss_pred --ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPFRE 274 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f~~ 274 (360)
..+ + .++++||+|+|++ ..+.+....|+.+.-+..
T Consensus 170 ~~~~~-g-~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~ 207 (263)
T 3k1z_A 170 ALRLA-H-MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVG 207 (263)
T ss_dssp HHHHH-T-CCGGGEEEEESCHHHHTHHHHTTTCEEEEECC
T ss_pred HHHHc-C-CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcC
Confidence 111 2 5679999999997 667777778887766643
No 175
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=97.55 E-value=2.8e-05 Score=69.46 Aligned_cols=94 Identities=12% Similarity=0.123 Sum_probs=65.1
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
...|++.++|+.+.+.+.++|.|++...++..+++.+|+. +. .+...+ ..+ ..|+-..++
T Consensus 120 ~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~----~~~~~~--------~~~--~~kp~~~~~~~~~ 183 (254)
T 3umc_A 120 RPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WD----MLLCAD--------LFG--HYKPDPQVYLGAC 183 (254)
T ss_dssp EECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CS----EECCHH--------HHT--CCTTSHHHHHHHH
T ss_pred CCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cc----eEEeec--------ccc--cCCCCHHHHHHHH
Confidence 3469999999999988999999999999999999999764 11 111111 111 123222222
Q ss_pred ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + .++++|++|+|+.....+....|+.+.-+.
T Consensus 184 ~~l-g-i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 184 RLL-D-LPPQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp HHH-T-CCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred HHc-C-CChHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 111 2 567999999999888888777787766554
No 176
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=97.51 E-value=2.8e-05 Score=76.40 Aligned_cols=121 Identities=17% Similarity=0.121 Sum_probs=77.1
Q ss_pred CCCCceEEeecccceeecCC--Cccc------ce--eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH-----h
Q psy11202 135 RPGKKLLVLDIDYTLFDHRS--AAEQ------GY--ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL-----L 198 (360)
Q Consensus 135 ~~~kk~LVLDLD~TLv~~~~--~~~~------~~--~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~-----L 198 (360)
..+.|+||+|+||||++-.- .... ++ -..-|++.++|+.+.+ ++.++|-|+....++..+++. +
T Consensus 219 ~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l 298 (387)
T 3nvb_A 219 GKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVL 298 (387)
T ss_dssp TCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSS
T ss_pred hCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhcccccc
Confidence 35789999999999998421 1110 00 1234789999999998 799999999999999999998 4
Q ss_pred CCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCC--eeEecccc
Q psy11202 199 GVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRN--GLRIRPFR 273 (360)
Q Consensus 199 ~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~N--gi~I~~f~ 273 (360)
+....+. .+... .++- ..+.+=+..+ + .++++|++|+|++.-...-..+ |+.+..+.
T Consensus 299 ~l~~~~~----v~~~~-------KPKp-~~l~~al~~L-----g-l~pee~v~VGDs~~Di~aaraalpgV~vi~~p 357 (387)
T 3nvb_A 299 KLDDIAV----FVANW-------ENKA-DNIRTIQRTL-----N-IGFDSMVFLDDNPFERNMVREHVPGVTVPELP 357 (387)
T ss_dssp CGGGCSE----EEEES-------SCHH-HHHHHHHHHH-----T-CCGGGEEEECSCHHHHHHHHHHSTTCBCCCCC
T ss_pred CccCccE----EEeCC-------CCcH-HHHHHHHHHh-----C-cCcccEEEECCCHHHHHHHHhcCCCeEEEEcC
Confidence 3332211 10000 0000 0111222222 2 4569999999999887666555 67776663
No 177
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=97.48 E-value=3e-05 Score=68.18 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=61.6
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcc---
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWG--- 238 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~--- 238 (360)
...|++.++|+.+.+++.++|.|++...++..+++.|+ .++. .++..+ ..+ ..|+-..++.
T Consensus 99 ~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~--~~fd----~i~~~~--------~~~--~~KP~~~~~~~~l 162 (240)
T 3smv_A 99 PAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG--VEFD----HIITAQ--------DVG--SYKPNPNNFTYMI 162 (240)
T ss_dssp CBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC--SCCS----EEEEHH--------HHT--SCTTSHHHHHHHH
T ss_pred CCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC--CccC----EEEEcc--------ccC--CCCCCHHHHHHHH
Confidence 46899999999999899999999999999999988753 2222 111111 111 1233332211
Q ss_pred ---cCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 239 ---KFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 239 ---~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
...+ .++++||+|+|++ ....+....|+.+.-+
T Consensus 163 ~~~~~lg-i~~~~~~~vGD~~~~Di~~a~~aG~~~~~~ 199 (240)
T 3smv_A 163 DALAKAG-IEKKDILHTAESLYHDHIPANDAGLVSAWI 199 (240)
T ss_dssp HHHHHTT-CCGGGEEEEESCTTTTHHHHHHHTCEEEEE
T ss_pred HHHHhcC-CCchhEEEECCCchhhhHHHHHcCCeEEEE
Confidence 1113 5679999999996 7776666667665543
No 178
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=97.48 E-value=7.3e-05 Score=65.10 Aligned_cols=102 Identities=14% Similarity=-0.028 Sum_probs=64.2
Q ss_pred eecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC
Q psy11202 161 ELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF 240 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~ 240 (360)
...+|++.++|+.+.+.|.++|-|++...+++.+++.+|+...+. -..+...+..+..........+.+-+..+.
T Consensus 68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~--- 142 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLC--HKLEIDDSDRVVGYQLRQKDPKRQSVIAFK--- 142 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE--EEEEECTTSCEEEEECCSSSHHHHHHHHHH---
T ss_pred cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceec--ceeEEcCCceEEeeecCCCchHHHHHHHHH---
Confidence 345899999999998879999999999999999999998753210 011111111010000000011222233332
Q ss_pred CCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 241 PSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 241 ~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
..+++|++|+|++....+....|+.+.
T Consensus 143 ---~~~~~~~~iGD~~~Di~~a~~aG~~~~ 169 (206)
T 1rku_A 143 ---SLYYRVIAAGDSYNDTTMLSEAHAGIL 169 (206)
T ss_dssp ---HTTCEEEEEECSSTTHHHHHHSSEEEE
T ss_pred ---hcCCEEEEEeCChhhHHHHHhcCccEE
Confidence 234799999999988877777788654
No 179
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.46 E-value=3.2e-05 Score=68.77 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=65.4
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
...|++.++|+.+.+.|.++|.|++...++..+++.+|+. +.. +... ...+ ..|+-...+
T Consensus 116 ~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~----~~~~--------~~~~--~~kp~~~~~~~~~ 179 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDV----IIGS--------DINR--KYKPDPQAYLRTA 179 (254)
T ss_dssp CBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSC----CCCH--------HHHT--CCTTSHHHHHHHH
T ss_pred cCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeE----EEEc--------CcCC--CCCCCHHHHHHHH
Confidence 3479999999999888999999999999999999999764 111 1110 1111 133333332
Q ss_pred ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + .++++|++|+|+.....+....|+.+.-+.
T Consensus 180 ~~l-g-i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 180 QVL-G-LHPGEVMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp HHT-T-CCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred HHc-C-CChHHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence 222 3 567999999999988888777787766554
No 180
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.43 E-value=0.00014 Score=65.37 Aligned_cols=94 Identities=9% Similarity=-0.046 Sum_probs=63.5
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCC
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFP 241 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~ 241 (360)
...|++.++|+.+..++.++|.|++...++..+++.+++..++...+.. ..+. +..+.+=+..+
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~----------~kp~-~~~~~~~~~~l----- 175 (251)
T 2pke_A 112 EVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV----------SEKD-PQTYARVLSEF----- 175 (251)
T ss_dssp CBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE----------SCCS-HHHHHHHHHHH-----
T ss_pred CcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee----------CCCC-HHHHHHHHHHh-----
Confidence 3468999999999888999999999999999999999876554322110 0000 00111112222
Q ss_pred CCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 242 SLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 242 ~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
+ .++++|++|.|++ .-..+....|+.+.-+
T Consensus 176 ~-~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v 206 (251)
T 2pke_A 176 D-LPAERFVMIGNSLRSDVEPVLAIGGWGIYT 206 (251)
T ss_dssp T-CCGGGEEEEESCCCCCCHHHHHTTCEEEEC
T ss_pred C-cCchhEEEECCCchhhHHHHHHCCCEEEEE
Confidence 2 4669999999998 7776666677766555
No 181
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=97.42 E-value=1.5e-05 Score=69.88 Aligned_cols=42 Identities=12% Similarity=-0.103 Sum_probs=35.5
Q ss_pred eecCccHHHHHHHHhc--CCeEEEEcCCcHHHHHHHHHHhCCCC
Q psy11202 161 ELMRPYLHEFLTSAYK--NYDIAIWSATGMKWIEEKMKLLGVTV 202 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~--~yeivIwTas~~~ya~~il~~L~~~~ 202 (360)
....||+.++|+.|.+ +|.++|.|+++..++..+++.+++..
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~ 117 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVE 117 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHH
Confidence 3457999999999987 69999999999999888888876543
No 182
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=97.39 E-value=0.00017 Score=62.85 Aligned_cols=113 Identities=21% Similarity=0.254 Sum_probs=71.9
Q ss_pred CCceEEeecccceeecCCC-cccc----eeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEE
Q psy11202 137 GKKLLVLDIDYTLFDHRSA-AEQG----YELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAF 210 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~-~~~~----~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~ 210 (360)
+.++++||+||||++.... .... .+..++ ..+|+.+.+ ++.++|-|+.+...+..+++.+|+... |
T Consensus 25 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d--~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------~ 96 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRD--GYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------Y 96 (188)
T ss_dssp TCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHH--HHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------E
T ss_pred cCCEEEEeCCCCcCCCCEEecCCCcEEEEeeccc--HHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------e
Confidence 5689999999999974310 0001 111122 237888887 799999999999999999999976421 1
Q ss_pred EEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 211 YVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 211 vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+. .+-....++.+- ..+ + .++++|++|.|+.....+....|+.+...
T Consensus 97 --~~--------~kpk~~~~~~~~---~~~-g-~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 97 --QG--------QSNKLIAFSDLL---EKL-A-IAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp --CS--------CSCSHHHHHHHH---HHH-T-CCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred --cC--------CCCCHHHHHHHH---HHc-C-CCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 10 000111111111 111 1 45689999999998888777888877543
No 183
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.38 E-value=6.7e-06 Score=71.33 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=62.4
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH-hCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc-
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL-LGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~-L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..++.. +|+..... .++..+ ..+. .|+-..++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~----~~~~~~--------~~~~--~Kp~~~~~~ 155 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD----HIYLSQ--------DLGM--RKPEARIYQ 155 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS----EEEEHH--------HHTC--CTTCHHHHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhee----eEEEec--------ccCC--CCCCHHHHH
Confidence 4568999999999985 899999999988887665554 44332221 111111 1111 23222222
Q ss_pred ---ccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 ---GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ---~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + .+++++|+|+|++....+....|+.+.-+.
T Consensus 156 ~~~~~~-~-~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 156 HVLQAE-G-FSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp HHHHHH-T-CCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHc-C-CCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 111 2 466899999999999888888898776663
No 184
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.37 E-value=6.9e-05 Score=63.97 Aligned_cols=95 Identities=20% Similarity=0.169 Sum_probs=62.9
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
...+|++.++|+.+.+ ++.++|.|++...++. +++.+++... +..++..+ ..+ ..|+-...+
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~----f~~~~~~~--------~~~--~~Kp~~~~~~~ 148 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY----FTEILTSQ--------SGF--VRKPSPEAATY 148 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG----EEEEECGG--------GCC--CCTTSSHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh----eeeEEecC--------cCC--CCCCCcHHHHH
Confidence 3458999999999987 6999999999999999 9999876532 12222211 111 123222111
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|+.....+....|+....+
T Consensus 149 ~~~~~-~-i~~~~~~~iGD~~nDi~~~~~aG~~~i~~ 183 (207)
T 2go7_A 149 LLDKY-Q-LNSDNTYYIGDRTLDVEFAQNSGIQSINF 183 (207)
T ss_dssp HHHHH-T-CCGGGEEEEESSHHHHHHHHHHTCEEEES
T ss_pred HHHHh-C-CCcccEEEECCCHHHHHHHHHCCCeEEEE
Confidence 111 2 56789999999988887776777764444
No 185
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=97.32 E-value=5.3e-05 Score=64.92 Aligned_cols=95 Identities=13% Similarity=0.007 Sum_probs=60.1
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhccc
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGK 239 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~ 239 (360)
+..+|++.++|+.+.+ ++.++|.|++...++..+ +.+|+... ...+...+..+...... ......-+..
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~k~~~l~~---- 147 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM----ANRAIFEDGKFQGIRLR-FRDKGEFLKR---- 147 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE----EEEEEEETTEEEEEECC-SSCHHHHHGG----
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh----eeeEEeeCCceECCcCC-ccCHHHHHHh----
Confidence 4679999999999997 699999999999999988 88875422 11111111111110000 0000111111
Q ss_pred CCCCCCCCcEEEEeCCchhhccCCCCeeEe
Q psy11202 240 FPSLYNPTNTIMFDDIRRNFLMNPRNGLRI 269 (360)
Q Consensus 240 ~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I 269 (360)
+++++|++|.|++....+....|+.|
T Consensus 148 ----l~~~~~i~iGD~~~Di~~~~~ag~~v 173 (201)
T 4ap9_A 148 ----FRDGFILAMGDGYADAKMFERADMGI 173 (201)
T ss_dssp ----GTTSCEEEEECTTCCHHHHHHCSEEE
T ss_pred ----cCcCcEEEEeCCHHHHHHHHhCCceE
Confidence 24589999999998887777777765
No 186
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.29 E-value=6.9e-05 Score=65.19 Aligned_cols=93 Identities=17% Similarity=0.119 Sum_probs=62.6
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc---
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW--- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~--- 237 (360)
...|++.++|+.+.+ ++.++|.|++ ..+..+++.+++...+. .++..+ ..+ ..|+-...+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~----~~~~~~--------~~~--~~Kp~~~~~~~~ 154 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD----AIADPA--------EVA--ASKPAPDIFIAA 154 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS----EECCTT--------TSS--SCTTSSHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc----eEeccc--------cCC--CCCCChHHHHHH
Confidence 457999999999987 7999999998 67888899887654332 111111 111 123322222
Q ss_pred -ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 -GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 -~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
..+ + .++++|++|+|++....+....|+.+.-+
T Consensus 155 ~~~l-g-i~~~~~i~iGD~~nDi~~a~~aG~~~~~~ 188 (221)
T 2wf7_A 155 AHAV-G-VAPSESIGLEDSQAGIQAIKDSGALPIGV 188 (221)
T ss_dssp HHHT-T-CCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHc-C-CChhHeEEEeCCHHHHHHHHHCCCEEEEE
Confidence 222 2 56799999999998888887778876655
No 187
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00015 Score=66.53 Aligned_cols=96 Identities=11% Similarity=0.228 Sum_probs=64.2
Q ss_pred eecCccHHHHHHHHhc--CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc-
Q psy11202 161 ELMRPYLHEFLTSAYK--NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~--~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~- 237 (360)
....|++.++|+.+.+ ++.++|.|++...++..+++.+++. ++.. ++..+. .+ ..|+-...+
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~----i~~~~~--------~~--~~kp~~~~~~ 177 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEY----FITAND--------VK--QGKPHPEPYL 177 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSS----EECGGG--------CS--SCTTSSHHHH
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCE----EEEccc--------CC--CCCCChHHHH
Confidence 4568999999999987 4999999999999999999999764 2211 111111 11 012211111
Q ss_pred ---ccCCCCC-------CCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 238 ---GKFPSLY-------NPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ---~~~~~~~-------~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + . ++++|++|.|++.-..+....|+.+..+.
T Consensus 178 ~~~~~l-g-i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~ 221 (275)
T 2qlt_A 178 KGRNGL-G-FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIA 221 (275)
T ss_dssp HHHHHT-T-CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred HHHHHc-C-CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 111 2 4 67999999999988887777787655543
No 188
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=97.23 E-value=0.00043 Score=62.80 Aligned_cols=85 Identities=13% Similarity=0.050 Sum_probs=61.6
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF 240 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~ 240 (360)
..+|++.++|+.+.+ ++.++|.|+....++..+++.+|+..++ + .++. ......+|++...+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f--------~--~~~~----~~k~~~~k~~~~~~--- 206 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYF--------A--EVLP----HEKAEKVKEVQQKY--- 206 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE--------C--SCCG----GGHHHHHHHHHTTS---
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHh--------H--hcCH----HHHHHHHHHHHhcC---
Confidence 578999999999987 7999999999999999999999874321 1 1111 11123456665542
Q ss_pred CCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 241 PSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 241 ~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
++++|-|+..-..+-...|+.|.
T Consensus 207 -------~~~~vGD~~nDi~~~~~Ag~~va 229 (280)
T 3skx_A 207 -------VTAMVGDGVNDAPALAQADVGIA 229 (280)
T ss_dssp -------CEEEEECTTTTHHHHHHSSEEEE
T ss_pred -------CEEEEeCCchhHHHHHhCCceEE
Confidence 68999999877777666676553
No 189
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=97.21 E-value=9.4e-05 Score=68.20 Aligned_cols=90 Identities=11% Similarity=0.074 Sum_probs=61.4
Q ss_pred cCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHh--C---------CCCCCCceEEEEEecCCceeeccccc-Cccee
Q psy11202 163 MRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLL--G---------VTVNPNYKIAFYVDYSAMISVHLPKY-GVVEV 230 (360)
Q Consensus 163 ~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L--~---------~~~~~~~~i~~vl~~~~~~~~~~~~~-g~~~~ 230 (360)
..|++.++|+. +|.++|.|+++...+..+++.+ | +.... ..+++. .. | .
T Consensus 126 ~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~----~~~f~~---------~~~g---~ 186 (253)
T 2g80_A 126 VYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYI----DGYFDI---------NTSG---K 186 (253)
T ss_dssp CCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGC----CEEECH---------HHHC---C
T ss_pred CCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhc----ceEEee---------eccC---C
Confidence 46889999988 8999999999999999999876 3 22111 111121 11 2 2
Q ss_pred eechhhccc---CCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 231 KPLGVIWGK---FPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 231 KdL~~l~~~---~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
|+-+.+|.. ..+ .++++||+|+|++.........|+...-+
T Consensus 187 KP~p~~~~~a~~~lg-~~p~~~l~vgDs~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 187 KTETQSYANILRDIG-AKASEVLFLSDNPLELDAAAGVGIATGLA 230 (253)
T ss_dssp TTCHHHHHHHHHHHT-CCGGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred CCCHHHHHHHHHHcC-CCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 655555521 112 56799999999999988887888776544
No 190
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=97.20 E-value=0.00041 Score=64.27 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=52.0
Q ss_pred CCCCCceEEeecccceeecCCC---------cc---------cceeecCccHHHHHHHHhc-CCeEEEEcCCc---HHHH
Q psy11202 134 PRPGKKLLVLDIDYTLFDHRSA---------AE---------QGYELMRPYLHEFLTSAYK-NYDIAIWSATG---MKWI 191 (360)
Q Consensus 134 ~~~~kk~LVLDLD~TLv~~~~~---------~~---------~~~~~~RP~l~eFL~~l~~-~yeivIwTas~---~~ya 191 (360)
+..+++++||||||||++.... .+ .......|++.++|+.|.+ ++.|+|-|+.+ ...+
T Consensus 55 ~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 55 GTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CCSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHH
T ss_pred cCCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHH
Confidence 3457899999999999987410 00 0114567999999999987 79999999988 5567
Q ss_pred HHHHHHhCCC
Q psy11202 192 EEKMKLLGVT 201 (360)
Q Consensus 192 ~~il~~L~~~ 201 (360)
...|+.+|+.
T Consensus 135 ~~~L~~~Gl~ 144 (258)
T 2i33_A 135 IKNLERVGAP 144 (258)
T ss_dssp HHHHHHHTCS
T ss_pred HHHHHHcCCC
Confidence 7778888875
No 191
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=97.17 E-value=0.00014 Score=63.44 Aligned_cols=40 Identities=8% Similarity=-0.084 Sum_probs=35.8
Q ss_pred eecCccHHHHHHHHhc--CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 161 ELMRPYLHEFLTSAYK--NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~--~yeivIwTas~~~ya~~il~~L~~ 200 (360)
....||+.++|+.+.+ ++.++|-|+++..++..+++.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 4567999999999987 699999999999999999998865
No 192
>2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens}
Probab=97.17 E-value=0.0014 Score=51.78 Aligned_cols=71 Identities=20% Similarity=0.243 Sum_probs=63.9
Q ss_pred eEEEEEEEC-C-eEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKWN-S-KEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~~-g-~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.|+|+|+.. | +...+.|..++++.-|....++..|+++..-+++ |.|..+..+.|..++++.+|+.|-++|
T Consensus 25 ~I~LkV~~~dg~~~v~fkIk~~t~l~kLm~aY~~~~g~~~~~vrF~---FDG~rI~~~~TP~dLdMEDgD~IDv~~ 97 (97)
T 2jxx_A 25 QLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFF---FDGTKLSGRELPADLGMESGDLIEVWG 97 (97)
T ss_dssp EEEEEEEESSSSCEEEEEEETTSCHHHHHHHHHHHTTCSSSCCEEE---ETTEECCSCSCHHHHTCCTTEEEEEEC
T ss_pred eEEEEEEcCCCCEEEEEEECCCChHHHHHHHHHHHHCCCcccEEEE---ECCEEcCCCCCHHHcCCCCCCEEEEeC
Confidence 488888874 4 3678889999999999999999999999999999 999999999999999999999998875
No 193
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=97.08 E-value=6.4e-05 Score=66.09 Aligned_cols=90 Identities=12% Similarity=0.169 Sum_probs=57.0
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW---- 237 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~---- 237 (360)
...|++.++|+.+.+.+.++|.|++... ++.+|+..++.. ++..+ ..+ ..|+-..++
T Consensus 105 ~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~----~~~~~--------~~~--~~kp~~~~~~~~~ 165 (230)
T 3vay_A 105 QIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAF----ALCAE--------DLG--IGKPDPAPFLEAL 165 (230)
T ss_dssp CBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSE----EEEHH--------HHT--CCTTSHHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeee----eEEcc--------ccC--CCCcCHHHHHHHH
Confidence 3689999999999988999999998765 556666544332 11111 111 123322222
Q ss_pred ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEeccc
Q psy11202 238 GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 ~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f 272 (360)
+.+ + .++++|++|+|+. ....+....|+.+.-+
T Consensus 166 ~~~-~-~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v 199 (230)
T 3vay_A 166 RRA-K-VDASAAVHVGDHPSDDIAGAQQAGMRAIWY 199 (230)
T ss_dssp HHH-T-CCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred HHh-C-CCchheEEEeCChHHHHHHHHHCCCEEEEE
Confidence 111 2 5679999999998 6776666677665444
No 194
>2bps_A YUKD protein; ubiquitin-like protein, ubiquitin; 2.7A {Bacillus subtilis}
Probab=97.07 E-value=0.00088 Score=51.13 Aligned_cols=69 Identities=20% Similarity=0.323 Sum_probs=57.6
Q ss_pred eEEEEEE---ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccC-----eeeeccccCCCCCCCccccccccCCCCCEEEE
Q psy11202 4 SLNLIIK---WNSKEYKTSLSKSNTVLELKQEILKQTGVNPER-----QKLLNLKHAGKIPSDDTKLADTNATDGFKLMV 75 (360)
Q Consensus 4 ~i~i~vk---~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~r-----QKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l 75 (360)
=|+|++- |.++.|++.+|...||..|...+.+..+++..+ .|+. -||..+.++..|++++|++|+.|-+
T Consensus 4 yI~ITidl~~y~~~~~DLRIP~~~tvK~Li~~l~ea~~l~~~~~~~~~irv~---NK~~~L~~~~~L~d~~ItnGD~Lei 80 (81)
T 2bps_A 4 YIDITIDLKHYNGSVFDLRLSDYHPVKKVIDIAWQAQSVSMPPREGHWIRVV---NKDKVFSGECKLSDCGITNGDRLEI 80 (81)
T ss_dssp EEEEEEECTTTTCCEEEEEEETTSBTTHHHHHHHHHSCCCSCCCTTCEEEEG---GGTEEEETTSBTGGGTCCTTCEEEE
T ss_pred EEEEEEEeeccCCceEEEECCCchhHHHHHHHHHHHhCCCcCCCCCCEEEEe---cCCEEEcCCCEEeeCCcCCCCEEEE
Confidence 3667776 699999999999999999999999999976532 2344 4788889999999999999998864
No 195
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=97.06 E-value=0.00015 Score=63.42 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=61.9
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCC-CceEEEEEecCCceeecccccCcceeeec----hhh
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNP-NYKIAFYVDYSAMISVHLPKYGVVEVKPL----GVI 236 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~-~~~i~~vl~~~~~~~~~~~~~g~~~~KdL----~~l 236 (360)
...|++.++|+.+.. .++|.|++...++..+++.+++.... .. +.+ .+.+ ..+ .+|+= ..+
T Consensus 87 ~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~~~~~~-~~~---~~~~------~~~--~~kpk~~~~~~~ 152 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYS---AKDL------GAD--RVKPKPDIFLHG 152 (229)
T ss_dssp CBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEE---HHHH------CTT--CCTTSSHHHHHH
T ss_pred ccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHHhccce-EEe---cccc------ccC--CCCcCHHHHHHH
Confidence 457888999988875 89999999999999999999876443 22 111 1100 011 00221 111
Q ss_pred cccCCCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 237 WGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 237 ~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
-..+ + .++++|++|+|+.....+....|+.+..+.
T Consensus 153 ~~~l-~-~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~ 187 (229)
T 2fdr_A 153 AAQF-G-VSPDRVVVVEDSVHGIHGARAAGMRVIGFT 187 (229)
T ss_dssp HHHH-T-CCGGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HHHc-C-CChhHeEEEcCCHHHHHHHHHCCCEEEEEe
Confidence 1111 2 567999999999988877777787655553
No 196
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=97.04 E-value=0.0012 Score=55.76 Aligned_cols=59 Identities=19% Similarity=0.304 Sum_probs=44.3
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHh
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLL 198 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L 198 (360)
..+++++||||||+.+.... ....-|...+.|+.+.+ ++.|+|+|.-+......+++.+
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~---i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l 61 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPR---IGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC 61 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTS---CCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCCCCCcc---ccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH
Confidence 36799999999999854211 11234799999999976 8999999999866666666655
No 197
>3v7o_A Minor nucleoprotein VP30; ssgcid, seattle structural genomics center for infectious disease, SMT, transcription; 2.25A {Reston ebolavirus}
Probab=96.93 E-value=0.00013 Score=65.20 Aligned_cols=69 Identities=19% Similarity=0.190 Sum_probs=0.0
Q ss_pred EEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 5 LNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 5 i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|+|+|...|....+.|..++++..|+...++..|+++..++++ |.|+.+.++.|..++++.+|++|-++
T Consensus 22 InLKV~qdGseV~FKIKrtTpL~KLM~AYcERqGLs~~siRFL---FDGqRI~dddTPadL~MEDGDtIDV~ 90 (227)
T 3v7o_A 22 INLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFL---YDGIRIQADQTPEDLDMEDNDIIEAH 90 (227)
T ss_dssp ------------------------------------------------------------------------
T ss_pred EEEEEeCCCCEEEEEEccCChHHHHHHHHHHHhCCCccceEEE---ECCEecCCCCCHHHcCCCCCCEEEEE
Confidence 6777755677778889999999999999999999999999999 99999999999999999999999775
No 198
>2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens}
Probab=96.78 E-value=0.0042 Score=48.61 Aligned_cols=72 Identities=15% Similarity=0.098 Sum_probs=65.9
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEcc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGS 78 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs 78 (360)
.|+|+|+++|...-+.+-.++...-|....++..|+++.+-+++ |.|.-+.++.|-.++++.+|+.|-++-.
T Consensus 21 ~IniKV~~~g~ev~FkIK~tt~l~KL~~aYc~r~gv~~~sirFl---fDG~rI~~~~TP~~L~meD~DiID~~~~ 92 (95)
T 2l76_A 21 LFPLKIRCRADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLL---FGETELSPTATPRTLKLGVADIIDCVVL 92 (95)
T ss_dssp CEEEEEECSSSEEEEEECSSSCTHHHHHHHHHHHTSCGGGEEEE---ETTEECCTTSCHHHHTCCSSCEEEEEEC
T ss_pred eEEEEEEcCCcEEEEEEecCChHHHHHHHHHhhcCCChhhEEEE---ECCcCCCCCCCHhHcCCCCCCEEEEEEe
Confidence 38999999998888999999999999999999999999999999 9999889898999999999999966643
No 199
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=96.77 E-value=0.0009 Score=57.50 Aligned_cols=101 Identities=16% Similarity=0.060 Sum_probs=61.0
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecc--c-ccCcceee--echh
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHL--P-KYGVVEVK--PLGV 235 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~--~-~~g~~~~K--dL~~ 235 (360)
...|++.++|+.+.+ ++.++|.|+....++..+++.+++..... ...++ . +..++... . ..+. -| .+..
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~--~K~~~l~~ 150 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA-NRLIV-K-DGKLTGDVEGEVLKEN--AKGEILEK 150 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE-EEEEE-E-TTEEEEEEECSSCSTT--HHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE-eeeEE-E-CCEEcCCcccCccCCc--cHHHHHHH
Confidence 346999999999987 79999999999999999999987632110 11111 1 10000000 0 0011 12 1222
Q ss_pred hcccCCCCCCCCcEEEEeCCchhhccCCCCeeEe
Q psy11202 236 IWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRI 269 (360)
Q Consensus 236 l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I 269 (360)
+-..+ + .++++|++|-|+..-..+-...|+.+
T Consensus 151 ~~~~l-g-i~~~~~~~iGD~~~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 151 IAKIE-G-INLEDTVAVGDGANDISMFKKAGLKI 182 (211)
T ss_dssp HHHHH-T-CCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred HHHHc-C-CCHHHEEEEecChhHHHHHHHCCCEE
Confidence 21221 2 56789999999998887776777764
No 200
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=96.75 E-value=0.00067 Score=64.42 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=65.0
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
+..+|++.++|+.+.+ ++.++|.|.+...+++.+++.+|+.......+.+ .............. .-|+=...+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~--~d~~~tg~~~~~~~--~~kpk~~~~~~ 252 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEI--VSGKLTGQVLGEVV--SAQTKADILLT 252 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE--ETTEEEEEEESCCC--CHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEe--eCCeeeeeeccccc--ChhhhHHHHHH
Confidence 4578999999999987 7999999999999999999999875322111111 11110000000001 112222221
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
..+ + .++++|++|.|+.....+-...|+.|.
T Consensus 253 ~~~~l-g-i~~~~~v~vGDs~nDi~~a~~aG~~va 285 (335)
T 3n28_A 253 LAQQY-D-VEIHNTVAVGDGANDLVMMAAAGLGVA 285 (335)
T ss_dssp HHHHH-T-CCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHHHc-C-CChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 111 2 566899999999988877767777654
No 201
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=96.65 E-value=0.01 Score=44.64 Aligned_cols=69 Identities=17% Similarity=0.269 Sum_probs=60.9
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCcc-CeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPE-RQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~-rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|++-+.. ....+.+.|+.++||..|-..-...-||+++ +-+|+ |-|.-+..+.++.++++.+|+.|-+|
T Consensus 10 ~~~~~~~~~~~dl~f~I~~~t~v~kLi~ayc~~~~I~~~~~Irll---FDGdRLdp~~tp~DlemeD~D~IDvm 80 (82)
T 3goe_A 10 ITLLLRSSKSEDLRLSIPVDFTVKDLIKRYCTEVKISFHERIRLE---FEGEWLDPNDQVQSTELEDEDQVSVV 80 (82)
T ss_dssp EEEEEEESSSCCEEEEEETTSBHHHHHHHHHHHHTCCCCTTCEEE---ETTEECCTTSBGGGSSCCTTCEEEEE
T ss_pred HHHhhhccCCCCeEEEecCCCCHHHHHHHHHHHcCCCcCceEEEE---EcCcccCccCChhhhCCcCCceeeee
Confidence 5555654 3445889999999999999999999999999 99999 99999999999999999999999766
No 202
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=96.64 E-value=0.0021 Score=57.78 Aligned_cols=98 Identities=10% Similarity=-0.034 Sum_probs=60.9
Q ss_pred cCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCC-CceEEEEEecCCceeecccccCcceeeechhhcccC
Q psy11202 163 MRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNP-NYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF 240 (360)
Q Consensus 163 ~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~-~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~ 240 (360)
..|++.++|+.+.+ ++.++|.|++...++..+++.+++.... .. +...+. ...+...-.-+..+-..+
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~------~~~~kp~~~~~~~~~~~l 173 (267)
T 1swv_A 104 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF----LVTPDD------VPAGRPYPWMCYKNAMEL 173 (267)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC----CBCGGG------SSCCTTSSHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh----eecCCc------cCCCCCCHHHHHHHHHHh
Confidence 46899999999987 6999999999999999999988654332 11 111110 001110001111111111
Q ss_pred CCCCCC-CcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 241 PSLYNP-TNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 241 ~~~~~~-~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+ .++ ++|++|.|+..-..+....|+.+..+
T Consensus 174 -g-i~~~~~~i~iGD~~nDi~~a~~aG~~~i~v 204 (267)
T 1swv_A 174 -G-VYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204 (267)
T ss_dssp -T-CCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred -C-CCCCcCEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 2 456 89999999998887777778654444
No 203
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=96.60 E-value=0.002 Score=59.86 Aligned_cols=69 Identities=20% Similarity=0.135 Sum_probs=53.6
Q ss_pred CCCCCceEEeecccceeecCC---------Ccc----------cceeecCccHHHHHHHHhc-CCeEEEEcCCcH----H
Q psy11202 134 PRPGKKLLVLDIDYTLFDHRS---------AAE----------QGYELMRPYLHEFLTSAYK-NYDIAIWSATGM----K 189 (360)
Q Consensus 134 ~~~~kk~LVLDLD~TLv~~~~---------~~~----------~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~----~ 189 (360)
+..+++++|||+||||++... ..+ ......-||+.+||+.+.+ ++.|+|-|+.+. .
T Consensus 54 ~~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~ 133 (262)
T 3ocu_A 54 AKGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKS 133 (262)
T ss_dssp CTTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHH
T ss_pred cCCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHH
Confidence 345778999999999998642 111 2356778999999999986 899999997755 5
Q ss_pred HHHHHHHHhCCCC
Q psy11202 190 WIEEKMKLLGVTV 202 (360)
Q Consensus 190 ya~~il~~L~~~~ 202 (360)
.+..-|+.+|+..
T Consensus 134 ~T~~~L~~lGi~~ 146 (262)
T 3ocu_A 134 GTIDDMKRLGFNG 146 (262)
T ss_dssp HHHHHHHHHTCSC
T ss_pred HHHHHHHHcCcCc
Confidence 7788888888754
No 204
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=96.59 E-value=0.00059 Score=67.20 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=61.2
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCC------cHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeech
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSAT------GMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLG 234 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas------~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~ 234 (360)
...|++.++|+.|.+ +|.++|.|++ ....+...+..| ..+++. ++.. ...+ ..|+-.
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l--~~~fd~----i~~~--------~~~~--~~KP~p 163 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCEL--KMHFDF----LIES--------CQVG--MVKPEP 163 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHH--HTTSSE----EEEH--------HHHT--CCTTCH
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhh--hhheeE----EEec--------cccC--CCCCCH
Confidence 467999999999987 6999999998 555555544433 333332 1111 1112 235554
Q ss_pred hhcccC---CCCCCCCcEEEEeCCchhhccCCCCeeEecccc
Q psy11202 235 VIWGKF---PSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 235 ~l~~~~---~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f~ 273 (360)
.++... .+ .++++|++|+|+..........|+...-+.
T Consensus 164 ~~~~~~~~~lg-~~p~~~~~v~D~~~di~~a~~aG~~~~~~~ 204 (555)
T 3i28_A 164 QIYKFLLDTLK-ASPSEVVFLDDIGANLKPARDLGMVTILVQ 204 (555)
T ss_dssp HHHHHHHHHHT-CCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHHcC-CChhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence 444211 12 567999999999998877777888766653
No 205
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=96.55 E-value=0.0006 Score=60.85 Aligned_cols=122 Identities=13% Similarity=0.050 Sum_probs=71.9
Q ss_pred CCceEEeecccceeecCCCcc-----------c----------------ceeecCccHHHHHHHHhc-CCeEEEEcCCcH
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAE-----------Q----------------GYELMRPYLHEFLTSAYK-NYDIAIWSATGM 188 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~-----------~----------------~~~~~RP~l~eFL~~l~~-~yeivIwTas~~ 188 (360)
..+.++|||||||+++..... . ......|++.++|+.+.+ ++.++|-|+++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 368999999999999642100 0 012346799999999987 899999999987
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeE
Q psy11202 189 KWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLR 268 (360)
Q Consensus 189 ~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~ 268 (360)
..+..+++.|. .++... + ...+. ...+. .|+-..++......++. +++|+|++..+......|+.
T Consensus 116 ~~~~~~l~~l~--~~f~~i--~-~~~~~------~~~~~--~KP~p~~~~~~~~~~g~--~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 116 TKTETVSKTLA--DNFHIP--A-TNMNP------VIFAG--DKPGQNTKSQWLQDKNI--RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CSSCCHHHHHH--HHTTCC--T-TTBCC------CEECC--CCTTCCCSHHHHHHTTE--EEEEESSHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHH--HhcCcc--c-cccch------hhhcC--CCCCHHHHHHHHHHCCC--EEEEECCHHHHHHHHHCCCe
Confidence 77766666531 111110 0 00000 00011 24333333111000222 99999999888877778877
Q ss_pred ecccc
Q psy11202 269 IRPFR 273 (360)
Q Consensus 269 I~~f~ 273 (360)
..-+.
T Consensus 181 ~i~v~ 185 (211)
T 2b82_A 181 GIRIL 185 (211)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 55443
No 206
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=96.50 E-value=0.006 Score=54.68 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=66.4
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
.|+|+|+-.++...+.+..++++.-|+...++..|+++..++++ |.|..+.++.+-.++.+.+|+.|-+.-...
T Consensus 21 ~i~ikv~~~~~~v~~~i~~~~~l~kl~~~y~~~~g~~~~~~~f~---fdG~~i~~~~Tpk~L~~ed~d~I~~~~eq~ 94 (209)
T 3uf8_A 21 HINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFL---YDGIRIQADQTPEDLDMEDNDIIEAHREQI 94 (209)
T ss_dssp EEEEEEECSSCEEEEEEETTSCTHHHHHHHHHHHTCCGGGCEEE---ETTEECCTTCCTTTTTCCTTEEEEEECSCT
T ss_pred cEEEEEEcCCCEEEEEEeeCCHHHHHHHHHHHhhCCChheEEEE---ECCEeccCCCChHHhhhcccccchhhcccc
Confidence 48888887777778999999999999999999999999999999 999999999999999999999998774443
No 207
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=96.50 E-value=0.0033 Score=51.40 Aligned_cols=51 Identities=27% Similarity=0.274 Sum_probs=37.9
Q ss_pred ceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHH
Q psy11202 139 KLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKW 190 (360)
Q Consensus 139 k~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~y 190 (360)
+++++||||||+++..... ..+...|...+.|+.+.+ ++.++|.|..+...
T Consensus 2 k~i~~DlDGTL~~~~~~~~-~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSDY-RNVLPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSCG-GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCcc-ccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 6899999999998643211 012345789999999976 89999999887543
No 208
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=96.49 E-value=0.0015 Score=60.59 Aligned_cols=66 Identities=24% Similarity=0.192 Sum_probs=51.4
Q ss_pred CCceEEeecccceeecCCC---------c----------ccceeecCccHHHHHHHHhc-CCeEEEEcCCcH----HHHH
Q psy11202 137 GKKLLVLDIDYTLFDHRSA---------A----------EQGYELMRPYLHEFLTSAYK-NYDIAIWSATGM----KWIE 192 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~---------~----------~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~----~ya~ 192 (360)
.++++|||+||||++.... . .......-||+.+||+.+.+ ++.|+|-|+.+. ..+.
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~ 136 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTV 136 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHH
Confidence 4569999999999986421 1 12346778999999999986 899999998765 4788
Q ss_pred HHHHHhCCCC
Q psy11202 193 EKMKLLGVTV 202 (360)
Q Consensus 193 ~il~~L~~~~ 202 (360)
..|+.+|+..
T Consensus 137 ~~L~~lGi~~ 146 (260)
T 3pct_A 137 DDMKRLGFTG 146 (260)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHcCcCc
Confidence 8888888754
No 209
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=96.45 E-value=0.0057 Score=55.76 Aligned_cols=58 Identities=22% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
..|++++||||||+++... .-|...+.|+.+.+ ++.++|.|.-+...+..+++.+++.
T Consensus 4 ~~kli~fDlDGTLl~~~~~-------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTNSKKE-------ISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN 62 (279)
T ss_dssp CCCEEEECCCCCCSCTTSC-------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred cceEEEEeCCCCCCCCCCc-------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence 4689999999999987532 24667778888765 8999999999999999999998764
No 210
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=96.41 E-value=0.0055 Score=55.83 Aligned_cols=59 Identities=14% Similarity=0.254 Sum_probs=39.6
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTV 202 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~ 202 (360)
..|++++||||||+++... .-|...+.|+.+.+ +..++|.|.-+...+..+++.+++..
T Consensus 4 ~~kli~~DlDGTLl~~~~~-------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 63 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNEKNE-------LAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG 63 (279)
T ss_dssp -CCEEEECC------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred ceEEEEEcCcCCCCCCCCc-------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 3589999999999987531 34566777878765 89999999999999999999997754
No 211
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus}
Probab=96.34 E-value=0.0044 Score=51.30 Aligned_cols=69 Identities=17% Similarity=0.208 Sum_probs=54.4
Q ss_pred EEEEE-ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCcc-------------------------------------Ceeee
Q psy11202 6 NLIIK-WNSKEYKTSLSKSNTVLELKQEILKQTGVNPE-------------------------------------RQKLL 47 (360)
Q Consensus 6 ~i~vk-~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~-------------------------------------rQKLl 47 (360)
.++|+ ..|...++.|+.+.||.+++..|+...||+.. +|||-
T Consensus 13 ~LkV~llDg~~ktl~VD~S~~V~~lv~~Ic~kigI~n~~ey~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~kL~ 92 (128)
T 2kc2_A 13 PLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDEYSLVRELMEEKKDEGTGTLRKDKTLLRDEKKMEKLKQKLH 92 (128)
T ss_dssp EEEEECTTSCEEEEEEEECSSHHHHHHHHHHHHTCCCCSSEEEEEECCCCCCCCCSSCCSSSSSCSCCSCCSCSSCCSCC
T ss_pred cEEEEcCCCCEEEEEeCCCcCHHHHHHHHHHHhCCCCcccccccccccccccccCchhhccccccccchhHHHHHHHHhc
Confidence 46777 47888899999999999999999999999855 45543
Q ss_pred ccccCCCCCCCccccccccCCCCCEEEE
Q psy11202 48 NLKHAGKIPSDDTKLADTNATDGFKLMV 75 (360)
Q Consensus 48 gl~~kgk~l~D~~~L~~~~l~~g~~i~l 75 (360)
.- -.+..|+++.+|.+.||.+|++++|
T Consensus 93 ~d-d~~~WLD~srtL~EQGI~e~~tllL 119 (128)
T 2kc2_A 93 TD-DELNWLDHGRTLREQGVEEHETLLL 119 (128)
T ss_dssp CS-SSEEEECSSSCHHHHTCCTTSEEEE
T ss_pred cc-CCCCcccCCCcHHHcCCCCCCEEEE
Confidence 10 1234666778999999999999876
No 212
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=96.34 E-value=0.0042 Score=55.77 Aligned_cols=57 Identities=23% Similarity=0.283 Sum_probs=48.8
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
.+++++||||||+++.. ...|...+.|..+.+ ++.++|.|..+...+..+++.+++.
T Consensus 5 ~kli~~DlDGTLl~~~~-------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDRDR-------LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN 62 (227)
T ss_dssp CCEEEEEHHHHSBCTTS-------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred eEEEEEECCCCCcCCCC-------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence 47999999999998632 246888999999976 7999999999999999999999764
No 213
>3ix6_A TS, tsase, thymidylate synthase; niaid, ssgcid, seattle structural center for infectious DISE brucellosis, orchitis, epididymitis, mastitis; 2.20A {Brucella melitensis}
Probab=96.33 E-value=0.00061 Score=65.91 Aligned_cols=69 Identities=19% Similarity=0.190 Sum_probs=0.0
Q ss_pred EEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 5 LNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 5 i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|+|+|+..|....+.|..++++..|+...++..|++++.++++ |.|+.+.++.|..++++.+|+.|-++
T Consensus 22 I~LKV~~~g~~v~FkIk~~t~l~kLm~aY~~r~G~~~~~~rFl---FdG~rI~~~~TP~~L~MEDgD~Idv~ 90 (360)
T 3ix6_A 22 INLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFL---YDGIRIQADQTPEDLDMEDNDIIEAH 90 (360)
T ss_dssp ------------------------------------------------------------------------
T ss_pred EEEEEecCCcEEEEEEecCChHHHHHHHHHHHhCCCcceEEEE---ECCeECCCCCChHHcCCCccchhhhh
Confidence 7888887777778889999999999999999999999999999 99999999999999999999999766
No 214
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=96.29 E-value=0.0061 Score=55.39 Aligned_cols=59 Identities=14% Similarity=0.212 Sum_probs=45.4
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEc---CCcHHHHHHHHHHhCCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWS---ATGMKWIEEKMKLLGVTVN 203 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwT---as~~~ya~~il~~L~~~~~ 203 (360)
..++++|||||||+++. . .. |+..++|+.+.+ +..+++.| .-+..-+...++.+|+...
T Consensus 4 ~~kli~~DlDGTLl~~~------~-~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKGK------S-RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp CCCEEEECCBTTTEETT------E-EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred CCCEEEEeCCCceEeCC------E-EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 46899999999999863 1 23 889999999987 89999999 4555566667777776543
No 215
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=96.27 E-value=0.0092 Score=54.86 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=47.2
Q ss_pred CCCCCCCceEEeecccceeecCCCcccceeecCccHHHH---HHHHh--cCCeEEEEcCCcHHHHHHHHHHhCCCCCCCc
Q psy11202 132 NEPRPGKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEF---LTSAY--KNYDIAIWSATGMKWIEEKMKLLGVTVNPNY 206 (360)
Q Consensus 132 ~~~~~~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eF---L~~l~--~~yeivIwTas~~~ya~~il~~L~~~~~~~~ 206 (360)
+.+....++++|||||||+++. .....++.+.+| |+.+. .++.+++.|..+..-+..++..+|+...+.+
T Consensus 16 ~~~~~~~kliifDlDGTLlds~-----i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~ 90 (289)
T 3gyg_A 16 STVEHPQYIVFCDFDETYFPHT-----IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHF 90 (289)
T ss_dssp CCCSSCSEEEEEETBTTTBCSS-----CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSE
T ss_pred cCCCCCCeEEEEECCCCCcCCC-----CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCe
Confidence 3334467899999999999974 111123334433 23232 4788899998888889999999987655544
No 216
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=96.24 E-value=0.0066 Score=54.21 Aligned_cols=57 Identities=19% Similarity=0.243 Sum_probs=47.1
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
.+++++||||||+++.. ..-|...+.|+.+.+ +..++|.|..+...+..+++.+++.
T Consensus 3 ~kli~~DlDGTLl~~~~-------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 3 IKAISIDIDGTITYPNR-------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp CCEEEEESTTTTBCTTS-------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred eeEEEEECCCCCCCCCC-------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence 37899999999998642 235677888888865 8999999999999999999998763
No 217
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=96.19 E-value=0.0062 Score=56.05 Aligned_cols=59 Identities=17% Similarity=0.177 Sum_probs=47.4
Q ss_pred CCCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 136 PGKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
+..|++++||||||+++... .-|...+.|+.+.+ +..++|.|.-+...+..+++.+++.
T Consensus 19 ~~~kli~~DlDGTLl~~~~~-------i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSPDHF-------LTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp --CCEEEEECCCCCSCTTSC-------CCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred CcceEEEEeCcCCCCCCCCc-------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 36789999999999986431 34567778888865 8999999999999999999999764
No 218
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=96.17 E-value=0.0092 Score=53.97 Aligned_cols=59 Identities=20% Similarity=0.188 Sum_probs=45.0
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCC---cHHHHHHHHHHhCCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSAT---GMKWIEEKMKLLGVTVN 203 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas---~~~ya~~il~~L~~~~~ 203 (360)
..++++|||||||++... .-|+..++|+.+.+ +..++|.|.. +..-+...++.+|+...
T Consensus 7 ~~kli~~DlDGTLl~~~~--------~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKSVT--------PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp CCSEEEEECBTTTEETTE--------ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred cCCEEEEcCcCcEECCCE--------eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 368999999999998532 23789999999987 8999999883 45555666777776543
No 219
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=96.14 E-value=0.0072 Score=55.76 Aligned_cols=58 Identities=17% Similarity=0.251 Sum_probs=47.3
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTV 202 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~ 202 (360)
.|++++||||||+++... .-|...+.|..+.+ +..++|-|.-+...+..+++.+++..
T Consensus 5 ~kli~~DlDGTLl~~~~~-------i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~ 63 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLPDHT-------ISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 63 (282)
T ss_dssp CCEEEECCCCCCSCTTSC-------CCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred ceEEEEeCCCCCCCCCCc-------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 579999999999986421 34567788888876 79999999999999999999997654
No 220
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=96.01 E-value=0.013 Score=45.37 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=63.4
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
+.|+|-. +++.+.|.|.++.|+.++=++-.++.|+.+++=-|. ++++.++-+..+.-.||.+|+++.|+-+...
T Consensus 10 m~v~Vl~~n~rr~~VKvtp~t~L~~VL~eaC~K~gl~~~~~~Lk---h~~k~lDLSlpfRlsgLpnnAkLELv~~s~s 84 (90)
T 2al3_A 10 SAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPSEYDLK---FQRTVLDLSLQWRFANLPNNAKLEMVPVSRS 84 (90)
T ss_dssp CCEEEECTTSCEEEECCCTTSBHHHHHHHHHHHTTCCGGGCEEE---ETTEEESSSCBHHHHCCCSSCEEEEECSSSC
T ss_pred cEEEEEcCCCcEEEEEECCCCCHHHHHHHHHHHhCCChhhCeEE---eCCEeccccceeEecCCCCCCEEEEEEccCC
Confidence 3677775 788999999999999999999999999998866666 9999998888999999999999998855443
No 221
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=95.94 E-value=0.0097 Score=54.50 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=45.6
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
..|++++||||||+++... .-|...+.|+.+.+ +..++|.|.-+...+..+++.+++.
T Consensus 5 ~~kli~fDlDGTLl~~~~~-------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 5 SKQLLALNIDGALLRSNGK-------IHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp -CCEEEECCCCCCSCTTSC-------CCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred cceEEEEcCCCCCCCCCCc-------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 4689999999999987532 24556777777765 8999999999998899999888664
No 222
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=95.92 E-value=0.011 Score=54.38 Aligned_cols=58 Identities=24% Similarity=0.175 Sum_probs=47.1
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
..+++++||||||+++... .-|...+.|+.+.+ +..++|-|.-+...+..+++.+++.
T Consensus 8 ~~~li~~DlDGTLl~~~~~-------~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSY-------DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CCEEEEEECTTTTSCSSCC-------SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CceEEEEeCCCCCCCCCCc-------CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4689999999999975321 12456788888876 7999999999999999999998764
No 223
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=95.91 E-value=0.0091 Score=53.85 Aligned_cols=56 Identities=25% Similarity=0.273 Sum_probs=45.2
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~ 200 (360)
.|++++||||||+++.. ...|...+.|+.+.+ ++.+++.|.-+...+..+++.+++
T Consensus 3 ~kli~~DlDGTLl~~~~-------~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~ 59 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQK-------QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGI 59 (258)
T ss_dssp CCEEEECTBTTTBCTTS-------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTC
T ss_pred ceEEEEeCCCCCcCCCC-------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCC
Confidence 47999999999998742 134667778888866 899999999888888888888864
No 224
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=95.76 E-value=0.012 Score=54.29 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=45.0
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~ 200 (360)
.+++++||||||+++... .-|...+.|..+.+ +..+++.|..+...+..+++.+++
T Consensus 4 ikli~~DlDGTLl~~~~~-------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 60 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNSKHQ-------VSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGI 60 (288)
T ss_dssp CCEEEEECCCCCSCTTSC-------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTC
T ss_pred eEEEEEeCCCCCCCCCCc-------cCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 479999999999986421 24566777888865 899999999999999998888754
No 225
>3qx1_A FAS-associated factor 1; UBX, protein binding, P97 binding; 1.60A {Homo sapiens} PDB: 3qwz_B* 3qc8_B 3qca_A 3qq8_B 3r3m_B 1h8c_A
Probab=95.73 E-value=0.053 Score=41.13 Aligned_cols=70 Identities=14% Similarity=0.089 Sum_probs=56.5
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCC---CccccccccCCCCCEEEE
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPS---DDTKLADTNATDGFKLMV 75 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~---D~~~L~~~~l~~g~~i~l 75 (360)
..+|.|+. +|....-..+.++||.+|..-|.. .+.++...+|+ ..|..+.+. .+.+|.++||.+++.|+|
T Consensus 7 ~~~i~iRlpdG~r~~~~F~~~~tl~~v~~fv~~-~~~~~~~f~L~-t~fPrk~l~~~d~~~TL~e~gL~p~a~L~v 80 (84)
T 3qx1_A 7 VSKLRIRTPSGEFLERRFLASNKLQIVFDFVAS-KGFPWDEYKLL-STFPRRDVTQLDPNKSLLEVKLFPQETLFL 80 (84)
T ss_dssp EEEEEEECTTSCEEEEEEETTSBHHHHHHHHHH-TTCCTTTEEEE-CSSSCCBGGGSCTTSBTTTTTCCSEEEEEE
T ss_pred eEEEEEECCCCCEEEEEeCCCCCHHHHHHHHHH-cCCCCCCeEEE-eCCCCCCCcCCCCCCCHHHCCCCCCCEEEE
Confidence 46788887 566677779999999999999998 67888888988 225567663 357999999999988876
No 226
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=95.70 E-value=0.0018 Score=63.40 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=0.0
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
.|+|+|+..+....+.|..++++..|+...++..|+++..++++ |.|+.+.++.|..++++.+|+.|-++
T Consensus 30 ~i~lkv~~~~~~~~~~i~~~~~~~~l~~~y~~~~g~~~~~~~f~---f~G~~i~~~~Tp~~l~med~d~i~~~ 99 (389)
T 4da1_A 30 HINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFL---YDGIRIQADQAPEDLDMEDNDIIEAH 99 (389)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cEEEEEecCCcEEEEEECCCChHHHHHHHHHHHhCCCcceEEEE---ECCEEcCCCCCHHHcCCCCCCEeeee
Confidence 37888887777777889999999999999999999999999999 99999999999999999999999665
No 227
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=95.66 E-value=0.01 Score=54.66 Aligned_cols=61 Identities=18% Similarity=0.098 Sum_probs=46.3
Q ss_pred CCCCCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 134 PRPGKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 134 ~~~~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~ 200 (360)
+....|++++||||||+++... ..-|...+.|+.+.+ +..++|-|.-+...+..++..++.
T Consensus 17 ~~~~~kli~~DlDGTLl~~~~~------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 17 FQGMIKLIATDIDGTLVKDGSL------LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp --CCCCEEEECCBTTTBSTTCS------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGG
T ss_pred hccCceEEEEeCcCCCCCCCCC------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3457799999999999976431 124667777888765 899999999988888888887753
No 228
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=95.66 E-value=0.014 Score=54.61 Aligned_cols=57 Identities=23% Similarity=0.244 Sum_probs=46.6
Q ss_pred CceEEeecccceeec-CCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHH--HHhC-CC
Q psy11202 138 KKLLVLDIDYTLFDH-RSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKM--KLLG-VT 201 (360)
Q Consensus 138 kk~LVLDLD~TLv~~-~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il--~~L~-~~ 201 (360)
.+++++||||||+++ ... .-|...+.|..+.+ +..++|-|.-+...+..++ +.++ +.
T Consensus 27 ikli~~DlDGTLl~~~~~~-------is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDKDIK-------VPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 88 (301)
T ss_dssp CCEEEEETBTTTBCCTTTC-------SCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred ccEEEEECCCCCcCCCCCc-------cCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence 579999999999986 321 23567788888876 8999999999999999999 9886 54
No 229
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=95.61 E-value=0.023 Score=51.25 Aligned_cols=58 Identities=26% Similarity=0.390 Sum_probs=44.0
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEc---CCcHHHHHHHHHHhCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWS---ATGMKWIEEKMKLLGVTV 202 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwT---as~~~ya~~il~~L~~~~ 202 (360)
..+++++||||||+++ .. .-|+..++++.+.+ ++.+++-| .-+...+...++.+|+..
T Consensus 16 ~~~~v~~DlDGTLl~~------~~--~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD------DS--LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp GCCEEEECCBTTTEET------TE--ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CCCEEEEcCcCcEEeC------CE--ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4678999999999986 12 23788999999887 89999999 445556666777777643
No 230
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=95.53 E-value=0.0071 Score=55.01 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=63.7
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcccC-
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKF- 240 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~- 240 (360)
...|++.++|+.+.+.|.++|.|++...++..+++.+|+..++...+ ..+ ..+ ..|+-..++...
T Consensus 121 ~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~----~~~--------~~~--~~KP~p~~~~~~~ 186 (260)
T 2gfh_A 121 ILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIV----IGG--------EQK--EEKPAPSIFYHCC 186 (260)
T ss_dssp CCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE----EGG--------GSS--SCTTCHHHHHHHH
T ss_pred CCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEE----ecC--------CCC--CCCCCHHHHHHHH
Confidence 45799999999999899999999999999999999998876554221 111 111 134443333110
Q ss_pred --CCCCCCCcEEEEeCC-chhhccCCCCee
Q psy11202 241 --PSLYNPTNTIMFDDI-RRNFLMNPRNGL 267 (360)
Q Consensus 241 --~~~~~~~ntIivDD~-~~~~~~~p~Ngi 267 (360)
.+ .+++++|+|+|+ .....+....|+
T Consensus 187 ~~~~-~~~~~~~~vGDs~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 187 DLLG-VQPGDCVMVGDTLETDIQGGLNAGL 215 (260)
T ss_dssp HHHT-CCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred HHcC-CChhhEEEECCCchhhHHHHHHCCC
Confidence 12 567999999995 776666666676
No 231
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=95.52 E-value=0.016 Score=52.35 Aligned_cols=54 Identities=24% Similarity=0.176 Sum_probs=43.2
Q ss_pred ceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 139 KLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 139 k~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
|++++||||||+ +.. .+ |-..+.|+.+.+ +..++|.|..+...+..+++.+++.
T Consensus 3 kli~~DlDGTLl-~~~-----~~---~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 3 RLIFLDIDKTLI-PGY-----EP---DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp EEEEECCSTTTC-TTS-----CS---GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred cEEEEeCCCCcc-CCC-----Cc---HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 789999999999 421 11 226788888865 8999999999999999999998753
No 232
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=95.43 E-value=0.0089 Score=54.02 Aligned_cols=56 Identities=30% Similarity=0.355 Sum_probs=43.1
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~ 200 (360)
.|++++||||||+++... .-|...+.|+.+.+ +..++|.|.-+...+..+++.+++
T Consensus 5 ~kli~fDlDGTLl~~~~~-------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~ 61 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEVYG-------IPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGV 61 (274)
T ss_dssp CCEEEECSBTTTBBTTTB-------CCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCC
T ss_pred ceEEEEECCCCCCCCCCc-------CCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCC
Confidence 489999999999987542 34556677777765 789999988888778887777754
No 233
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=95.39 E-value=0.0096 Score=51.31 Aligned_cols=111 Identities=15% Similarity=0.043 Sum_probs=70.4
Q ss_pred CCCceEEeecccceeecCCC-c----ccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH--hCCCCCCCce
Q psy11202 136 PGKKLLVLDIDYTLFDHRSA-A----EQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL--LGVTVNPNYK 207 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~-~----~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~--L~~~~~~~~~ 207 (360)
.+.++||+|+||||++.... . +...+..|.+. .|+.|.+ ++.++|-|+. ..+..+++. +++. +
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----~- 77 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAI--GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----T- 77 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHH--HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC----E-
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHH--HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE----E-
Confidence 36789999999999986421 1 11234445553 6888877 8999999998 789999984 4331 1
Q ss_pred EEEEEecCCceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 208 IAFYVDYSAMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 208 i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+ .. .......++ .+-..+ + .++++|++|-|+..-..+-...|+.+.+-
T Consensus 78 --~-~g---------~~~K~~~l~---~~~~~~-g-i~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 78 --E-VS---------VSDKLATVD---EWRKEM-G-LCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp --E-CS---------CSCHHHHHH---HHHHHT-T-CCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred --E-EC---------CCChHHHHH---HHHHHc-C-cChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 1 11 000111122 222222 2 56789999999998887777778776553
No 234
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=95.34 E-value=0.027 Score=51.31 Aligned_cols=56 Identities=13% Similarity=0.041 Sum_probs=45.1
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
.|++++||||||+++... .-|...+.|+. .+ +..++|-|.-+...+..+++.+++.
T Consensus 2 ikli~~DlDGTLl~~~~~-------i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~ 58 (268)
T 1nf2_A 2 YRVFVFDLDGTLLNDNLE-------ISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR 58 (268)
T ss_dssp BCEEEEECCCCCSCTTSC-------CCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred ccEEEEeCCCcCCCCCCc-------cCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence 378999999999986421 23556777877 54 8999999999999999999999764
No 235
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=95.26 E-value=0.016 Score=53.71 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=82.5
Q ss_pred HHHhhHHhhhhccccCCC---CC-CCCceEEeecccceeecCCCc-----ccceeecCccHHHHHHHHhc-CCeEEEEcC
Q psy11202 116 LAKIDKRIQDYQIDILNE---PR-PGKKLLVLDIDYTLFDHRSAA-----EQGYELMRPYLHEFLTSAYK-NYDIAIWSA 185 (360)
Q Consensus 116 l~kl~~ri~~y~i~i~~~---~~-~~kk~LVLDLD~TLv~~~~~~-----~~~~~~~RP~l~eFL~~l~~-~yeivIwTa 185 (360)
...++++...|....... .. .....+++|+|||+....... .-......||+.++|+.|.+ ++.++|-|+
T Consensus 133 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~ 212 (301)
T 1ltq_A 133 IDVLRSMYKSMREYLGLPVYNGTPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSG 212 (301)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCCTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHhcccCCcceeccccccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeC
Confidence 355666666665432211 11 234688899999987643321 11234568999999999987 799999999
Q ss_pred CcHHHH---HHHHHH--------hCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc----ccCCCCCCC-CcE
Q psy11202 186 TGMKWI---EEKMKL--------LGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW----GKFPSLYNP-TNT 249 (360)
Q Consensus 186 s~~~ya---~~il~~--------L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~----~~~~~~~~~-~nt 249 (360)
....++ ...++. +|+ ++ . +++..+. .. .|+-+.+. ..+ + -.+ +.+
T Consensus 213 k~~~~~~~~~~~l~~~~~~~~~~~~~--~~--~--~~~~~~~------~~-----~kp~p~~~~~~~~~~-~-~~~~~~~ 273 (301)
T 1ltq_A 213 RESGTKEDPTKYYRMTRKWVEDIAGV--PL--V--MQCQREQ------GD-----TRKDDVVKEEIFWKH-I-APHFDVK 273 (301)
T ss_dssp SCCCCSSSTTHHHHHHHHHHHHTTCC--CC--S--EEEECCT------TC-----CSCHHHHHHHHHHHH-T-TTTCEEE
T ss_pred CCcccchhHHHHHHhcccccccccCC--Cc--h--heeeccC------CC-----CcHHHHHHHHHHHHH-h-ccccceE
Confidence 987665 556777 666 22 1 2221111 00 12222221 111 0 122 346
Q ss_pred EEEeCCchhhccCCCCeeEeccc
Q psy11202 250 IMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 250 IivDD~~~~~~~~p~Ngi~I~~f 272 (360)
++|+|++....+...+|+.+...
T Consensus 274 ~~vgD~~~di~~a~~aG~~~~~v 296 (301)
T 1ltq_A 274 LAIDDRTQVVEMWRRIGVECWQV 296 (301)
T ss_dssp EEEECCHHHHHHHHHTTCCEEEC
T ss_pred EEeCCcHHHHHHHHHcCCeEEEe
Confidence 89999999998888888875443
No 236
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=95.25 E-value=0.016 Score=52.39 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=43.9
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcC---CcHHHHHHHHHHhCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSA---TGMKWIEEKMKLLGVTV 202 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTa---s~~~ya~~il~~L~~~~ 202 (360)
..++++|||||||+++. . .-|...++|+.+.+ +..++|.|. -+..-+...++.+|+..
T Consensus 5 ~~kli~~DlDGTLl~~~------~--~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNGT------E--KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp CCSEEEEECSSSTTCHH------H--HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred cCCEEEEeCcCceEeCC------E--eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 36899999999999752 1 23678899999987 899999977 44455666777777643
No 237
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=95.22 E-value=0.017 Score=52.19 Aligned_cols=55 Identities=24% Similarity=0.274 Sum_probs=43.6
Q ss_pred ceEEeecccceeecCCCcccceeecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 139 KLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 139 k~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
.++++||||||+++. .. -|...+.|+.+.++..++|-|.-+...+..+++.+++.
T Consensus 4 ~li~~DlDGTLl~~~-----~~---~~~~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~l~ 58 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ-----QA---LEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLM 58 (244)
T ss_dssp EEEEECTBTTTBSCH-----HH---HHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred eEEEEeCCCCCcCCH-----HH---HHHHHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 389999999999753 11 14566677777778999999999999999999998764
No 238
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=95.19 E-value=0.044 Score=50.06 Aligned_cols=57 Identities=14% Similarity=0.026 Sum_probs=44.5
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcC---CcHHHHHHHHHHhCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSA---TGMKWIEEKMKLLGVT 201 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTa---s~~~ya~~il~~L~~~ 201 (360)
..++++|||||||++.. .+ -|+..++|..+.+ ++.+++.|. .+...+...++.+|+.
T Consensus 13 ~~k~i~~D~DGtL~~~~------~~--~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN------GL--LPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp GCSEEEECSBTTTEETT------EE--CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred cCCEEEEcCcCCcCcCC------ee--ChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 35789999999999852 12 3889999999976 899999995 4456666777888775
No 239
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=95.15 E-value=0.048 Score=48.45 Aligned_cols=57 Identities=19% Similarity=0.179 Sum_probs=39.0
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcC---CcHHHHHHHHHHhCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSA---TGMKWIEEKMKLLGVT 201 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTa---s~~~ya~~il~~L~~~ 201 (360)
..+++++||||||+++.. .. |+..++++.+.+ ++.+++.|. .+...+...+..+|+.
T Consensus 6 ~ik~i~fDlDGTLld~~~------~~--~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 6 ALKAVLVDLNGTLHIEDA------AV--PGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp CCCEEEEESSSSSCC---------CC--TTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred hCCEEEEeCcCcEEeCCE------eC--cCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 468999999999998532 11 667788888887 688888883 3444455555666654
No 240
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=95.03 E-value=0.018 Score=51.16 Aligned_cols=95 Identities=7% Similarity=-0.010 Sum_probs=65.4
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc--
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW-- 237 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~-- 237 (360)
....|++.++|+.|.+ +|.++|.|++...++..+++.+++. ++.. ++..+.+ + ..|+-..++
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~----~~~~~~~--------~--~~Kp~p~~~~~ 173 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDF----ALGEKSG--------I--RRKPAPDMTSE 173 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSE----EEEECTT--------S--CCTTSSHHHHH
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeE----EEecCCC--------C--CCCCCHHHHHH
Confidence 3457999999999986 7999999999999999999999875 4432 2121111 1 123322222
Q ss_pred --ccCCCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 238 --GKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 238 --~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+.+ + .++++||+|.|++....+....|+....+
T Consensus 174 ~~~~l-~-~~~~~~~~vGDs~~Di~~a~~aG~~~v~v 208 (240)
T 2hi0_A 174 CVKVL-G-VPRDKCVYIGDSEIDIQTARNSEMDEIAV 208 (240)
T ss_dssp HHHHH-T-CCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred HHHHc-C-CCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 111 2 56799999999998887777778764333
No 241
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=94.96 E-value=0.062 Score=47.69 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=41.7
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEc---CCcHHHHHHHHHHhCCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWS---ATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwT---as~~~ya~~il~~L~~~ 201 (360)
.+++++||||||+++.+.. .. .-|+..+.++.+.+ ++.+++.| ..+..-+...+..+|+.
T Consensus 12 ~k~i~fDlDGTLl~s~~~~--~~--~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSGAGG--GT--AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp CCEEEECCBTTTEECCTTT--CE--ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCeEEecCCCC--Cc--cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 5799999999999974211 11 23667777888776 78999999 55555566666666654
No 242
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=94.82 E-value=0.064 Score=49.75 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=43.4
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcC---CcHHHHHHHHHHhCCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSA---TGMKWIEEKMKLLGVT 201 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTa---s~~~ya~~il~~L~~~ 201 (360)
.+++++||||||++.. . .-|+..++|..+.+ ++.+++.|. -+.......++.+|+.
T Consensus 21 ~k~i~~D~DGTL~~~~------~--~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNGE------R--AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp CSEEEECSBTTTEETT------E--ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEECCCCcEecCC------c--cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4789999999999742 1 24789999999986 899999994 4556666677777764
No 243
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=94.80 E-value=0.028 Score=50.93 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=41.2
Q ss_pred ceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH---hCCC
Q psy11202 139 KLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL---LGVT 201 (360)
Q Consensus 139 k~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~---L~~~ 201 (360)
+++++||||||++.. . .. |+..++|+.+.+ +..+++.|..+......+.+. +|+.
T Consensus 2 k~i~~D~DGtL~~~~------~-~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN------R-AI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp EEEEEECBTTTEETT------E-EC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred eEEEEeCcCceEeCC------E-eC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 689999999999742 1 22 789999999986 899999998776555555444 4554
No 244
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=94.62 E-value=0.064 Score=51.71 Aligned_cols=59 Identities=20% Similarity=0.146 Sum_probs=46.5
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCc----HHHHHHHHHHhCCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATG----MKWIEEKMKLLGVTVN 203 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~----~~ya~~il~~L~~~~~ 203 (360)
.+++++|||||||++... .=|+..+||+.+.+ ++.+++.|.++ ..+++.+-+.+|+...
T Consensus 12 ~~~~~l~D~DGvl~~g~~--------~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~ 75 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGKK--------PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVS 75 (352)
T ss_dssp CCEEEEECCBTTTEETTE--------ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCC
T ss_pred cCCEEEEECCCeeEcCCe--------eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCC
Confidence 578999999999997531 23999999999987 89999999765 5667766667887543
No 245
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=94.48 E-value=0.049 Score=49.44 Aligned_cols=53 Identities=19% Similarity=0.272 Sum_probs=40.4
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLG 199 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~ 199 (360)
..|++++||||||+++.. ..-|...+.|+.+.+ +..++|-|..+... +.+.|+
T Consensus 3 ~~kli~~DlDGTLl~~~~-------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~ 56 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPPRL-------CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLG 56 (246)
T ss_dssp CSEEEEECSBTTTBSTTS-------CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHC
T ss_pred CceEEEEeCcCCcCCCCC-------ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhh
Confidence 368999999999998643 124678888999886 79999999888774 445554
No 246
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=94.34 E-value=0.014 Score=52.85 Aligned_cols=54 Identities=28% Similarity=0.218 Sum_probs=42.4
Q ss_pred ceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhC
Q psy11202 139 KLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLG 199 (360)
Q Consensus 139 k~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~ 199 (360)
|++++||||||+++... ..-|...+.|+.+.+ ++.+++.|..+ ..+..+++.++
T Consensus 3 kli~~DlDGTLl~~~~~------~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~ 57 (261)
T 2rbk_A 3 KALFFDIDGTLVSFETH------RIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ 57 (261)
T ss_dssp CEEEECSBTTTBCTTTS------SCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred cEEEEeCCCCCcCCCCC------cCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence 78999999999987431 134667778888876 79999999888 88877777775
No 247
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=94.31 E-value=0.066 Score=47.99 Aligned_cols=54 Identities=24% Similarity=0.420 Sum_probs=38.5
Q ss_pred CCCceEEeecccceeecCCCcccceeecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhC
Q psy11202 136 PGKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLG 199 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~ 199 (360)
++++++++||||||+++.. . .-|...+.|+.+.+...++|-|.-+.. .+.+.|+
T Consensus 4 ~~~kli~~DlDGTLl~~~~-----~--i~~~~~~al~~l~~~i~v~iaTGR~~~---~~~~~l~ 57 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQ-----K--ITKEMDDFLQKLRQKIKIGVVGGSDFE---KVQEQLG 57 (246)
T ss_dssp CCSEEEEEESBTTTBCTTS-----C--CCHHHHHHHHHHTTTSEEEEECSSCHH---HHHHHHC
T ss_pred CCceEEEEECCCCcCCCCc-----c--cCHHHHHHHHHHHhCCeEEEEcCCCHH---HHHHHhc
Confidence 4678999999999997632 1 246678888888766667777766543 3556665
No 248
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=94.26 E-value=0.059 Score=48.96 Aligned_cols=50 Identities=24% Similarity=0.306 Sum_probs=36.4
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhcCCeEEEEcCCcHHHHHH
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYKNYDIAIWSATGMKWIEE 193 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~ 193 (360)
..+++++||||||+++.. . .-|...+.|+.+.+...++|-|.-+...+..
T Consensus 12 ~~kli~~DlDGTLl~~~~-----~--is~~~~~al~~l~~~i~v~iaTGR~~~~~~~ 61 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQ-----K--IDPEVAAFLQKLRSRVQIGVVGGSDYCKIAE 61 (262)
T ss_dssp -CEEEEEESBTTTBSTTS-----C--CCHHHHHHHHHHTTTSEEEEECSSCHHHHHH
T ss_pred CeEEEEEeCccCCCCCCC-----c--CCHHHHHHHHHHHhCCEEEEEcCCCHHHHHH
Confidence 568999999999998642 1 2467888899887677778888766554443
No 249
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=94.20 E-value=0.025 Score=52.54 Aligned_cols=56 Identities=13% Similarity=0.212 Sum_probs=42.0
Q ss_pred CCceEEeecccceeecCCCcccceeecCcc-HHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPY-LHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLG 199 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~-l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~ 199 (360)
..|++++||||||+++... .-|. ..+.|+.+.+ +..++|.|.-+...+..++..++
T Consensus 36 ~iKli~fDlDGTLld~~~~-------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~ 93 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNSKGS-------YDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCH 93 (304)
T ss_dssp CCSEEEECCCCCCSCTTSC-------CCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTG
T ss_pred eeEEEEEeCCCCCCCCCCc-------cCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 3689999999999987532 2244 5667777765 89999999988888877766654
No 250
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=94.03 E-value=0.033 Score=50.78 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=41.6
Q ss_pred CceEEeecccceeecCCCcccceeecCcc-HHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPY-LHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLG 199 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~-l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~ 199 (360)
.|++++||||||+++... .-|. +.+.|+.+.+ +..++|-|.-+...+..+++.++
T Consensus 3 ~kli~~DlDGTLl~~~~~-------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~ 59 (271)
T 1rlm_A 3 VKVIVTDMDGTFLNDAKT-------YNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELK 59 (271)
T ss_dssp CCEEEECCCCCCSCTTSC-------CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTT
T ss_pred ccEEEEeCCCCCCCCCCc-------CCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcC
Confidence 479999999999986421 2334 4677888766 89999999999888877766553
No 251
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=93.98 E-value=0.037 Score=49.72 Aligned_cols=56 Identities=21% Similarity=0.141 Sum_probs=40.9
Q ss_pred ceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH
Q psy11202 139 KLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL 197 (360)
Q Consensus 139 k~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~ 197 (360)
+++++||||||++...... .-..-|...+.|+.+.+ + .++|-|.-+...+..++..
T Consensus 2 kli~~DlDGTLl~~~~~~~--~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~ 58 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNPE--ESYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPL 58 (239)
T ss_dssp CEEEEECBTTTBCCCSCGG--GCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCS
T ss_pred eEEEEecCCCCcCCCCCcc--cCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhcc
Confidence 6899999999997532111 11245778889999876 7 8899998888877766543
No 252
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=93.88 E-value=0.38 Score=35.02 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=48.1
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|...|+|+|.-......++++...||.+|.+++ ++++.+--+. ..|..+..+. .|++|+.|-++
T Consensus 1 ~~~~m~i~vNg~~~~~~~~~~~~~tv~~Ll~~l----~~~~~~v~va---vN~~~v~~~~-----~L~~gD~V~ii 64 (70)
T 1ryj_A 1 MVIGMKFTVITDDGKKILESGAPRRIKDVLGEL----EIPIETVVVK---KNGQIVIDEE-----EIFDGDIIEVI 64 (70)
T ss_dssp CCCCEEEEEEETTEEEEEEESSCCBHHHHHHHT----TCCTTTEEEE---ETTEECCTTS-----BCCTTCEEEEE
T ss_pred CceeEEEEEeCccCceeEECCCCCcHHHHHHHh----CCCCCCEEEE---ECCEECCCcc-----cCCCCCEEEEE
Confidence 566788888877777788888889999998877 5666655444 6777765543 58899999776
No 253
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=93.85 E-value=0.074 Score=47.73 Aligned_cols=58 Identities=14% Similarity=0.171 Sum_probs=40.3
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHH----hCCCC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKL----LGVTV 202 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~----L~~~~ 202 (360)
..++++|||||||+++. .. . |+..++|..+.+ ++.+++.|..+..-...+.+. +|+..
T Consensus 4 ~~k~v~fDlDGTL~~~~------~~-~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK------EP-I-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp SCCEEEECCBTTTEETT------EE-C-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred cCCEEEEeCCCeEEeCC------EE-C-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 35799999999999853 11 2 678888888866 888888887665444444333 66543
No 254
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=93.69 E-value=0.17 Score=43.93 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=36.0
Q ss_pred CceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCC---cHHHHHHHHHHhCC
Q psy11202 138 KKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSAT---GMKWIEEKMKLLGV 200 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas---~~~ya~~il~~L~~ 200 (360)
.+++++||||||+++.. . ..+. .++++.+.+ +..+++.|.. +..-+...+..+|+
T Consensus 3 ~k~i~fDlDGTLl~~~~------~-~~~~-~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~ 61 (250)
T 2c4n_A 3 IKNVICDIDGVLMHDNV------A-VPGA-AEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp CCEEEEECBTTTEETTE------E-CTTH-HHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred ccEEEEcCcceEEeCCE------e-CcCH-HHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCC
Confidence 47899999999998642 1 1233 778888876 7888887733 33344444444554
No 255
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=93.55 E-value=0.018 Score=56.37 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=68.5
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCc-eEEEEEecCCceeec--ccccCcceeeechhh
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNY-KIAFYVDYSAMISVH--LPKYGVVEVKPLGVI 236 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~-~i~~vl~~~~~~~~~--~~~~g~~~~KdL~~l 236 (360)
+...||+.++|+.|.+ +|.++|-|+++..++..+++.+|+..++.. .+.+ .+...... ....+ ...|+-+.+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs---~ddv~~~~~~~~~~k-p~~KP~P~~ 289 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIAT---ASDVLEAENMYPQAR-PLGKPNPFS 289 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEEC---HHHHHHHHHHSTTSC-CCCTTSTHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEe---ccccccccccccccc-CCCCCCHHH
Confidence 4568999999999987 699999999999999999999988765431 2221 11100000 00000 012443333
Q ss_pred cc----cC-------------CCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 237 WG----KF-------------PSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 237 ~~----~~-------------~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+. .+ ++ .++++||+|+|++.........|+...-+
T Consensus 290 ~~~a~~~lg~~~~~~~~~~~~~~-v~p~e~l~VGDs~~Di~aAk~AG~~~I~V 341 (384)
T 1qyi_A 290 YIAALYGNNRDKYESYINKQDNI-VNKDDVFIVGDSLADLLSAQKIGATFIGT 341 (384)
T ss_dssp HHHHHHCCCGGGHHHHHHCCTTC-SCTTTEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHcCCccccccccccccC-CCCcCeEEEcCCHHHHHHHHHcCCEEEEE
Confidence 31 11 11 46799999999998887777778765444
No 256
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=93.37 E-value=0.045 Score=49.83 Aligned_cols=95 Identities=9% Similarity=0.027 Sum_probs=66.1
Q ss_pred eecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhC---CCCCCCceEEEEEecCCceeecccccCcceeeechhh
Q psy11202 161 ELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLG---VTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVI 236 (360)
Q Consensus 161 ~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~---~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l 236 (360)
....|++.++|+.+.+ ++.++|.|+++..++..+++.++ +..++. .+++. . .+ .|+-..+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd----~i~~~-~--------~~---~KP~p~~ 192 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD----GHFDT-K--------IG---HKVESES 192 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS----EEECG-G--------GC---CTTCHHH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhcc----EEEec-C--------CC---CCCCHHH
Confidence 4578999999999975 89999999999999999998653 544332 22221 1 11 3554444
Q ss_pred cccC---CCCCCCCcEEEEeCCchhhccCCCCeeEeccc
Q psy11202 237 WGKF---PSLYNPTNTIMFDDIRRNFLMNPRNGLRIRPF 272 (360)
Q Consensus 237 ~~~~---~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~~f 272 (360)
+... .+ .++++||+|+|++.........|+...-+
T Consensus 193 ~~~~~~~lg-~~p~~~l~VgDs~~di~aA~~aG~~~i~v 230 (261)
T 1yns_A 193 YRKIADSIG-CSTNNILFLTDVTREASAAEEADVHVAVV 230 (261)
T ss_dssp HHHHHHHHT-SCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhC-cCcccEEEEcCCHHHHHHHHHCCCEEEEE
Confidence 3210 12 56799999999998888777888765443
No 257
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=93.36 E-value=0.048 Score=47.14 Aligned_cols=95 Identities=11% Similarity=0.080 Sum_probs=63.9
Q ss_pred cCccHHHHHHHHhc-CCeEEEEcCCc---HHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhc-
Q psy11202 163 MRPYLHEFLTSAYK-NYDIAIWSATG---MKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIW- 237 (360)
Q Consensus 163 ~RP~l~eFL~~l~~-~yeivIwTas~---~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~- 237 (360)
..|++.++|+.+.+ ++.++|.|++. ..++..+++.+++...+... +..+ ..+ ..|+-..++
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~----~~~~--------~~~--~~kp~~~~~~ 165 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKT----FFAD--------EVL--SYKPRKEMFE 165 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEE----EEHH--------HHT--CCTTCHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhh----eecc--------ccC--CCCCCHHHHH
Confidence 48999999999987 69999999999 99999999999876543321 1111 111 123333222
Q ss_pred ---ccCCCCCCCCcEEEEeCCc-hhhccCCCCeeEecccc
Q psy11202 238 ---GKFPSLYNPTNTIMFDDIR-RNFLMNPRNGLRIRPFR 273 (360)
Q Consensus 238 ---~~~~~~~~~~ntIivDD~~-~~~~~~p~Ngi~I~~f~ 273 (360)
..+ + .++++|++|+|++ .-..+....|+.+.-+.
T Consensus 166 ~~~~~l-g-i~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~ 203 (235)
T 2om6_A 166 KVLNSF-E-VKPEESLHIGDTYAEDYQGARKVGMWAVWIN 203 (235)
T ss_dssp HHHHHT-T-CCGGGEEEEESCTTTTHHHHHHTTSEEEEEC
T ss_pred HHHHHc-C-CCccceEEECCChHHHHHHHHHCCCEEEEEC
Confidence 122 3 5679999999999 55666666676655543
No 258
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=93.26 E-value=0.096 Score=47.10 Aligned_cols=48 Identities=21% Similarity=0.174 Sum_probs=33.6
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHH
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKW 190 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~y 190 (360)
-.|++++||||||+++... ...|...+.|+.+.+ ++.++|-|.-+..-
T Consensus 11 miKli~~DlDGTLl~~~~~------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~ 59 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFETH------KVSQSSIDALKKVHDSGIKIVIATGRAASD 59 (268)
T ss_dssp CCCEEEECSBTTTBCTTTC------SCCHHHHHHHHHHHHTTCEEEEECSSCTTC
T ss_pred ceEEEEEeCCCCCcCCCCC------cCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3689999999999984221 134566777777765 78888877665443
No 259
>2dzk_A UBX domain-containing protein 2; ubiquitin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} PDB: 2kxj_A
Probab=93.15 E-value=0.5 Score=37.59 Aligned_cols=73 Identities=10% Similarity=0.143 Sum_probs=58.6
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCC--C-ccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPS--D-DTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~--D-~~~L~~~~l~~g~~i~l~g 77 (360)
..+|.|+. .|....-.++.++||.+|.+-|....+.+...-.|+- .|..+.+. | +.+|.++||.+...|++.-
T Consensus 13 ~t~IqIRlpdG~rl~~rF~~~~tl~~v~~fV~~~~~~~~~~f~L~t-~fPrk~l~~~d~~~TL~elgL~psa~L~v~~ 89 (109)
T 2dzk_A 13 IARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLAT-MFPRREFTREDYKRRLLDLELAPSASVVLLP 89 (109)
T ss_dssp CEEEEEECSSSCEEEEEECTTSBHHHHHHHHHHHHTTSSCSCEEEC-SSSCCBCCTTTTTSBTGGGTCSSEEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCCCHHHHHHHHHhccCCCCCceEEEc-CCCCcCCcccccCCCHHHCCCCCceEEEEEE
Confidence 47888996 6777888899999999999999999888777778772 25566665 3 5799999999988777653
No 260
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=92.52 E-value=0.22 Score=45.75 Aligned_cols=105 Identities=7% Similarity=0.052 Sum_probs=73.6
Q ss_pred CCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecC
Q psy11202 137 GKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYS 215 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~ 215 (360)
+..++.+|.|+++.... ......+|++.++|+.|.+ ++.++|-|++...++..+++.+|+... | +
T Consensus 142 g~~~i~~~~d~~~~~~~----~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------f--~-- 207 (287)
T 3a1c_A 142 AKTAVIVARNGRVEGII----AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLV------I--A-- 207 (287)
T ss_dssp TCEEEEEEETTEEEEEE----EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEE------E--C--
T ss_pred CCeEEEEEECCEEEEEE----EeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCcee------e--e--
Confidence 56789999999887532 1234679999999999987 799999999999999999999987421 1 1
Q ss_pred CceeecccccCcceeeechhhcccCCCCCCCCcEEEEeCCchhhccCCCCeeEe
Q psy11202 216 AMISVHLPKYGVVEVKPLGVIWGKFPSLYNPTNTIMFDDIRRNFLMNPRNGLRI 269 (360)
Q Consensus 216 ~~~~~~~~~~g~~~~KdL~~l~~~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I 269 (360)
.++ +. + ..+-+..+. .. ++|++|.|+..-..+....|+.|
T Consensus 208 ~i~----~~-~--K~~~~~~l~------~~-~~~~~vGDs~~Di~~a~~ag~~v 247 (287)
T 3a1c_A 208 EVL----PH-Q--KSEEVKKLQ------AK-EVVAFVGDGINDAPALAQADLGI 247 (287)
T ss_dssp SCC----TT-C--HHHHHHHHT------TT-CCEEEEECTTTCHHHHHHSSEEE
T ss_pred ecC----hH-H--HHHHHHHHh------cC-CeEEEEECCHHHHHHHHHCCeeE
Confidence 011 11 1 112222221 23 78999999987776666667653
No 261
>2daj_A KIAA0977 protein, COBL-like 1; ubiquitin-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.32 E-value=0.37 Score=36.67 Aligned_cols=74 Identities=16% Similarity=0.207 Sum_probs=59.9
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCc
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLE 80 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~ 80 (360)
++++.|.+ +.+++.+.|++..++.+|--.|.++..+.|++--|+-....+..|+=+.+|.++||++ +..+-+..
T Consensus 10 TvRLvVNy~~tQKtVvRVSP~vpL~ellp~IC~Kcefdp~~~~Ll~d~~~~e~LdLskSLndlgirE---Lya~d~~~ 84 (91)
T 2daj_A 10 TVRVVINFKKTQKTIVRVSPHASLQELAPIICSKCEFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRE---LYAMDVNR 84 (91)
T ss_dssp CEEEEEEETTTEEEEEEECSSSCTTTHHHHHHHHTTCCTTSEEEESCSSCCCBCCTTSCHHHHTCSE---EEEEECCC
T ss_pred EEEEEEeecCcceeEEEeCCCCcHHHHHHHHhhcccCChhhEEEecCCCCCcccchhcchhhhhhhh---hheecccc
Confidence 58899998 5677889999999999999999999999999999983322344566678999999987 66665443
No 262
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=91.94 E-value=0.15 Score=45.86 Aligned_cols=49 Identities=27% Similarity=0.221 Sum_probs=37.2
Q ss_pred eEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 140 LLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 140 ~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~ 200 (360)
++++||||||+++. ..-|...+-|+.+.+ +..++|-|.-+...+. .+++
T Consensus 2 li~~DlDGTLl~~~--------~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~ 51 (259)
T 3zx4_A 2 IVFTDLDGTLLDER--------GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGL 51 (259)
T ss_dssp EEEECCCCCCSCSS--------SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTC
T ss_pred EEEEeCCCCCcCCC--------cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCC
Confidence 68999999999863 235677788888865 8899998877766655 6654
No 263
>1wj4_A KIAA0794 protein; UBX domain, beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.2
Probab=91.60 E-value=0.5 Score=38.57 Aligned_cols=71 Identities=20% Similarity=0.333 Sum_probs=57.1
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCC--CC-ccccccccCCCCCEEEEE
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIP--SD-DTKLADTNATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l--~D-~~~L~~~~l~~g~~i~l~ 76 (360)
..+|.|+. .|..+.-.++.++||.+|..-|... +.++..-.|+- .|-.+.+ .| +.+|.++||.+...|+|.
T Consensus 43 ~t~IqIRlPdG~rl~~rF~~~~tl~~V~~fV~~~-~~~~~~F~L~t-~fPrk~l~~~d~~~TL~e~gL~psa~Liv~ 117 (124)
T 1wj4_A 43 KAQLMLRYPDGKREQITLPEQAKLLALVKHVQSK-GYPNERFELLT-NFPRRKLSHLDYDITLQEAGLCPQETVFVQ 117 (124)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCHHHHHHHHHHH-HCCTTTEEEEC-SSSCCEETSSCSSSCTTTTTCCSSBCCEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCCCHHHHHHHHHhc-CCCCCCeEEec-CCCCcCCccCCCCCCHHHCCCCCceEEEEE
Confidence 47889997 6777788899999999999999887 78888888872 2566766 23 589999999998877764
No 264
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=90.02 E-value=0.66 Score=35.24 Aligned_cols=43 Identities=12% Similarity=0.134 Sum_probs=39.0
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
.++|+|.+. -++.|.|+.+.+..+|.++|.+..++|++.-+|-
T Consensus 5 ~~~VKV~~~-~tvairvp~~~~y~~L~~~l~~kL~l~~~~~~Ls 47 (83)
T 1oey_A 5 AYTLKVHYK-YTVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLS 47 (83)
T ss_dssp CEEEEEESS-SEEEEEECTTCCHHHHHHHHHHHTTCCGGGCCEE
T ss_pred cEEEEEEEE-EEEEEECCCCCCHHHHHHHHHHHhCCCcceeEEE
Confidence 478888888 6788999999999999999999999999998887
No 265
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=89.12 E-value=0.72 Score=35.06 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=48.2
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCC----CCCCCccccccccCCCCCEEEEEc
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAG----KIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kg----k~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
.++|++-+.+..|-|.|+++.+..+|+.+|.....+. .+.++- +++ ..+.++..|... |..+.+|++-+
T Consensus 12 ~~KVK~yy~DDIiAIrvP~di~~~~L~dKi~~RLk~~--~~~l~~--ykde~~g~~i~sD~dl~~a-iqrn~KL~l~~ 84 (85)
T 1ip9_A 12 TTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRIDTD--NFKLQT--KLFDGSGEEIKTDSQVSNI-IQAKLKISVHD 84 (85)
T ss_dssp CEEEEECBTTCCEEEEECSCCCHHHHHHHHHHHHTSS--CEEEEE--CCSSSCCSCCCSHHHHHHH-HHTTCCEEEEE
T ss_pred ceEEEEEecCcEEEEECCCCCCHHHHHHHHHHHhccc--ceEEEE--ecCCCCCCcccCHHHHHHH-HHhcCeeEEec
Confidence 3777888899999999999999999999999999884 445441 232 233333344333 56667777654
No 266
>2cr5_A Reproduction 8; UBX domain, D0H8S2298E protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.15.1.2
Probab=88.06 E-value=2.2 Score=33.75 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=55.1
Q ss_pred eEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCC--CccccccccCCCCCEEEEE
Q psy11202 4 SLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPS--DDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~--D~~~L~~~~l~~g~~i~l~ 76 (360)
..+|.|+. .|+.+.-.++.++||.+|..-|... +..+..-+|+- .|-.+.+. .+.+|.++||.+...|+|-
T Consensus 23 ~~~IqiRlpdG~r~~rrF~~~~tl~~v~~fv~~~-~~~~~~f~L~t-~fPrk~l~~d~~~TL~e~gL~p~a~L~Ve 96 (109)
T 2cr5_A 23 VVTVALRCPNGRVLRRRFFKSWNSQVLLDWMMKV-GYHKSLYRLST-SFPRRALEVEGGSSLEDIGITVDTVLNVE 96 (109)
T ss_dssp EEEEEEECTTSCEEEEEEESSSBTHHHHHHHHHH-TCCTTTEEEEC-SSSCCBCCCCSSCBHHHHTCSSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCCCHHHHHHHHHhc-CCCCCCeEEEe-CCCCcCCCCCCCCCHHHcCCCCCeEEEEE
Confidence 57888996 5767777899999999999999965 56667777762 25566665 3589999999998887654
No 267
>4a3p_A Ubiquitin carboxyl-terminal hydrolase 15; 1.40A {Homo sapiens} PDB: 4a3o_A 3pv1_A 3ppa_A* 3t9l_A 3lmn_A
Probab=86.16 E-value=3.1 Score=37.01 Aligned_cols=70 Identities=21% Similarity=0.248 Sum_probs=51.5
Q ss_pred EEEEEEECCeE---EEEEeCCCCCHHHHHHHHHHHhCCCccC-eeeecccc-C--CCCCCC-ccccccccCCCCCEEEE
Q psy11202 5 LNLIIKWNSKE---YKTSLSKSNTVLELKQEILKQTGVNPER-QKLLNLKH-A--GKIPSD-DTKLADTNATDGFKLMV 75 (360)
Q Consensus 5 i~i~vk~~g~~---~~i~v~~~~Tv~~LK~~I~~~tgVp~~r-QKLlgl~~-k--gk~l~D-~~~L~~~~l~~g~~i~l 75 (360)
+.+++...+.. +++.++..+||.+|++.+.+.++|++++ -+|-.. + . ...+.| +.+|.+++|.+|+.|.|
T Consensus 128 ~~l~l~~~~~~~~~~~~~~Sk~~ti~~l~~~~~~~~~i~~~~~~RlW~~-~~~~~~~~L~~~~~tl~~~~l~~~Q~ill 205 (217)
T 4a3p_A 128 TELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNK-YMSNTFEPLNKPDSTIQDAGLYQGQVLVI 205 (217)
T ss_dssp EEEEEEETTEEEEEEEEEECTTSBHHHHHHHHHHHTTCCTTSCEEEEEE-EETTEEEECCCTTSBHHHHTCCTTCEEEE
T ss_pred cEEEEEecCCCCcceEEEEcccchHHHHHHHHHHHhCCCCCCceEEEEe-cCCCCeeecCCCCCCHHHhCCCCCCEEEE
Confidence 45556655543 5677899999999999999999999984 565421 1 1 234555 46999999999999864
No 268
>3jyu_A Ubiquitin carboxyl-terminal hydrolase; domain in ubiquitin-specific peptidases (DUSP), proto- oncogene, ubiquitin-fold, UBL, protease, thioesterase; HET: 1PS; 2.37A {Mus musculus}
Probab=85.65 E-value=3.3 Score=37.20 Aligned_cols=70 Identities=26% Similarity=0.323 Sum_probs=51.0
Q ss_pred EEEEEEECCeE---EEEEeCCCCCHHHHHHHHHHHhCCCccC-eeeecccc-C--CCCCCC-ccccccccCCCCCEEEE
Q psy11202 5 LNLIIKWNSKE---YKTSLSKSNTVLELKQEILKQTGVNPER-QKLLNLKH-A--GKIPSD-DTKLADTNATDGFKLMV 75 (360)
Q Consensus 5 i~i~vk~~g~~---~~i~v~~~~Tv~~LK~~I~~~tgVp~~r-QKLlgl~~-k--gk~l~D-~~~L~~~~l~~g~~i~l 75 (360)
+.+++...+.. +++.++..+|+.+|++.+.+.++|++++ -+|-.. + . ...|.| +.+|.+++|.+|+.|.|
T Consensus 140 ~~l~l~~~~~~~~~~~~~~Sk~~ti~~l~~~~~~~~~i~~~~~~RLW~~-~~~~~~~~L~~~~~tl~d~~L~~~Q~ill 217 (231)
T 3jyu_A 140 LELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNK-YMSNTYEQLSKLDNTIQDAGLYQGQVLVI 217 (231)
T ss_dssp EEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHTTCCTTSCEEEEEC-SSSSSCEECCCTTSBTTTTTCCTTEEEEE
T ss_pred ceEEEEecCCCCceEEEEecccCcHHHHHHHHHHHhCCCCCCeEEEEEe-cCCCCHhhhcCCCCCHHHhCCCCCCEEEE
Confidence 45556555543 4566799999999999999999999984 666421 1 1 224554 47999999999998864
No 269
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=85.01 E-value=0.81 Score=37.65 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=28.4
Q ss_pred EEEeCCCCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 17 KTSLSKSNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 17 ~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
.+.|..++|+.+||..|++.+|||+++|+|-
T Consensus 59 ~~rv~k~~~~~~~~~~va~~lg~~~~~~RlW 89 (130)
T 2kvr_A 59 VFKVLKNSSLAEFVQSLSQTMGFPQDQIRLW 89 (130)
T ss_dssp EEECCTTSBHHHHHHHHHHHHCCCGGGCEEE
T ss_pred eEEEeccCcHHHHHHHHHHHhCCCcccEEEE
Confidence 4677889999999999999999999999986
No 270
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=84.22 E-value=2.7 Score=30.85 Aligned_cols=59 Identities=14% Similarity=0.293 Sum_probs=41.7
Q ss_pred EEEEEECCe-EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEc
Q psy11202 6 NLIIKWNSK-EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 6 ~i~vk~~g~-~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
+|+|+-.|. .-.++++..+||+|| -+..|+|++.--++ .+|..+..+. +.+|++|.++-
T Consensus 2 ~v~Vkl~g~~~~~~ev~~g~Tv~dL----L~~Lgl~~~~VvV~---vNG~~v~~d~------~l~GD~VeIv~ 61 (74)
T 2l32_A 2 NVTVEVVGEETSEVAVDDDGTYADL----VRAVDLSPHEVTVL---VDGRPVPEDQ------SVEVDRVKVLR 61 (74)
T ss_dssp EEEEECSSSSEEEEECSTTCSHHHH----HHTTCCCSSCCCEE---CCCCCCCTTS------SSCCCCEEECS
T ss_pred EEEEEEeCccceeEEcCCCCcHHHH----HHHcCCCcceEEEE---ECCEECCHHH------CCCCCEEEEEE
Confidence 455664444 345889999999986 45678999988656 7888776554 23589888763
No 271
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=83.90 E-value=3.3 Score=39.57 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=54.6
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhC----CCccCeeeeccc---cCCCCCCCccccccccCCCCCEEEE
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTG----VNPERQKLLNLK---HAGKIPSDDTKLADTNATDGFKLMV 75 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tg----Vp~~rQKLlgl~---~kgk~l~D~~~L~~~~l~~g~~i~l 75 (360)
+++++|...+.+-++.+++++||.|.-..|.++.+ .+++.=-|.=.. -+|.-+.+..+|..+++.+|+.|..
T Consensus 3 ~~~~~~~~~~~~~~~~f~~~~~v~~~~~~i~e~~~~~~~~~~~~y~l~~~~~~~~~~~Wl~~~~~l~~y~~~~~~~l~~ 81 (371)
T 3ivf_A 3 ALSLKISIGNVVKTMQFEPSTMVYDACRMIRERIPEALAGPPNDFGLFLSDDDPKKGIWLEAGKALDYYMLRNGDTMEY 81 (371)
T ss_dssp CEEEEEEETTEEEEEEECTTCBHHHHHHHHHTTCGGGGSSCGGGEEEEECCSSGGGCEECCTTSBGGGGTCCTTCEEEE
T ss_pred cEEEEEEecceeEEEEECCCCCHHHHHHHHHHhcccccCCCHHHCeEeccCCCCCcCEeccCCCCHHHhCCCCCceeec
Confidence 67777777788888999999999999999988764 355655665100 1455577788999999999987654
No 272
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=83.83 E-value=2.8 Score=39.90 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=45.9
Q ss_pred ECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCC-CCCCCc-cccccccC-CCCCEEEEEccCcc
Q psy11202 11 WNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAG-KIPSDD-TKLADTNA-TDGFKLMVMGSLEQ 81 (360)
Q Consensus 11 ~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kg-k~l~D~-~~L~~~~l-~~g~~i~l~gs~~~ 81 (360)
..-....+.+.+..|+.++++.+++.|+|+++.|.|+ +.+ +...+. ..-..++- .+...++|+.+.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~i~~~~q~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (396)
T 4eut_A 319 QQMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELI---YEGRRLVLEPGRLAQHFPKTTEENPIFVVSREGN 389 (396)
T ss_dssp TTTEEEEEEECTTCBHHHHHHHHHHHHCCCSTTEEEE---SSSSEECCCSSCBTTSSCCCCSSSCEEEEECC--
T ss_pred ccceEEEEEcCchhHHHHHHHHHHHhcCCChhhhHHH---hcCCCCCCCCCCccccCCCCCCCCCeEEEecCCC
Confidence 3455567888999999999999999999999999999 666 333333 22333321 23345777765543
No 273
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=83.80 E-value=0.34 Score=42.63 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=14.4
Q ss_pred CceEEeecccceeecCC
Q psy11202 138 KKLLVLDIDYTLFDHRS 154 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~ 154 (360)
.++++|||||||+++..
T Consensus 4 ~k~viFDlDGTL~ds~~ 20 (240)
T 2hi0_A 4 YKAAIFDMDGTILDTSA 20 (240)
T ss_dssp CSEEEECSBTTTEECHH
T ss_pred ccEEEEecCCCCccCHH
Confidence 46899999999999753
No 274
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=83.45 E-value=5.1 Score=36.53 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=40.0
Q ss_pred ceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCC
Q psy11202 159 GYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTV 202 (360)
Q Consensus 159 ~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~ 202 (360)
..+..||+..+|++.|.+ ++.++|.|.+....++++++.+|+..
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH 182 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCc
Confidence 357789999999999997 89999999999999999999998753
No 275
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=82.23 E-value=0.35 Score=41.45 Aligned_cols=16 Identities=38% Similarity=0.461 Sum_probs=13.9
Q ss_pred CceEEeecccceeecC
Q psy11202 138 KKLLVLDIDYTLFDHR 153 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~ 153 (360)
.++++|||||||+++.
T Consensus 4 ~k~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLN 19 (235)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred ceEEEEeCCCCCCCcc
Confidence 4789999999999864
No 276
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=81.04 E-value=2.1 Score=40.50 Aligned_cols=37 Identities=8% Similarity=-0.025 Sum_probs=33.3
Q ss_pred ecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHh
Q psy11202 162 LMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLL 198 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L 198 (360)
...|...+.++++.. +++++|-|||....++++...+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 467889999999986 8999999999999999999875
No 277
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=81.03 E-value=2.2 Score=32.57 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=41.4
Q ss_pred EEEEEECCeEEEEEeCCC-CCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 6 NLIIKWNSKEYKTSLSKS-NTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 6 ~i~vk~~g~~~~i~v~~~-~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
.++|.-+|+.++ ++.. .||.+|-+.+ ++++.+-.+. .+|..+..+ .+.+..|++|+.|-++
T Consensus 20 ~M~I~vNGe~~e--l~~~~~Tv~dLL~~L----~~~~~~vaVa---vNg~iV~~~-~~~~~~L~dGD~Vei~ 81 (87)
T 1tyg_B 20 RHMLQLNGKDVK--WKKDTGTIQDLLASY----QLENKIVIVE---RNKEIIGKE-RYHEVELCDRDVIEIV 81 (87)
T ss_dssp --CEEETTEEEC--CSSSCCBHHHHHHHT----TCTTSCCEEE---ETTEEECGG-GTTTSBCCSSSEEEEE
T ss_pred ceEEEECCEEEE--CCCCCCcHHHHHHHh----CCCCCCEEEE---ECCEECChh-hcCCcCCCCCCEEEEE
Confidence 345667888554 4665 8999998876 5666555444 677765433 5666779999999776
No 278
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=81.89 E-value=0.32 Score=44.27 Aligned_cols=88 Identities=17% Similarity=0.182 Sum_probs=60.8
Q ss_pred eeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCceEEEEEecCCceeecccccCcceeeechhhcc
Q psy11202 160 YELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVTVNPNYKIAFYVDYSAMISVHLPKYGVVEVKPLGVIWG 238 (360)
Q Consensus 160 ~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~~~~~~~i~~vl~~~~~~~~~~~~~g~~~~KdL~~l~~ 238 (360)
....||++.++|+.|.+ ++.++|-|..+...+..+++.+|+...+. .++ +. ...+-+..+.
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~----~~~----------p~---~k~~~~~~l~- 195 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYS----NLS----------PE---DKVRIIEKLK- 195 (263)
Confidence 34579999999999987 79999999999999999999998753221 110 01 0111122221
Q ss_pred cCCCCCCCCcEEEEeCCchhhccCCCCeeEec
Q psy11202 239 KFPSLYNPTNTIMFDDIRRNFLMNPRNGLRIR 270 (360)
Q Consensus 239 ~~~~~~~~~ntIivDD~~~~~~~~p~Ngi~I~ 270 (360)
..+++|++|.|+..-..+-...|+.|.
T Consensus 196 -----~~~~~~~~VGD~~~D~~aa~~Agv~va 222 (263)
T 2yj3_A 196 -----QNGNKVLMIGDGVNDAAALALADVSVA 222 (263)
Confidence 234789999999877776666776543
No 279
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=80.26 E-value=0.54 Score=42.27 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=15.3
Q ss_pred CCceEEeecccceeecCC
Q psy11202 137 GKKLLVLDIDYTLFDHRS 154 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~~ 154 (360)
..+.++|||||||+++..
T Consensus 17 ~~k~viFDlDGTLvds~~ 34 (260)
T 2gfh_A 17 RVRAVFFDLDNTLIDTAG 34 (260)
T ss_dssp CCCEEEECCBTTTBCHHH
T ss_pred cceEEEEcCCCCCCCCHH
Confidence 567899999999998753
No 280
>1s3s_G P47 protein; AAA ATPase, protein-protein complex, UBX domain, protein binding; HET: ADP; 2.90A {Rattus norvegicus} SCOP: d.15.1.2 PDB: 1i42_A 1jru_A
Probab=79.87 E-value=2.9 Score=33.99 Aligned_cols=68 Identities=13% Similarity=0.241 Sum_probs=51.4
Q ss_pred EEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHH-hCCCccCeeeeccccCCCCCCC-ccccccccCCCCCEE
Q psy11202 5 LNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQ-TGVNPERQKLLNLKHAGKIPSD-DTKLADTNATDGFKL 73 (360)
Q Consensus 5 i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~-tgVp~~rQKLlgl~~kgk~l~D-~~~L~~~~l~~g~~i 73 (360)
.+|.|+. .|....-.++.++||.+|.+-|... .+.....-.|+- .|-.+.+.| +.+|.++||.+...|
T Consensus 53 t~IqIRlpdG~rl~~rF~~~~tl~~v~~fV~~~~~~~~~~~f~L~t-~fPrk~l~d~~~TL~eagL~psavl 123 (127)
T 1s3s_G 53 TNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMT-TFPNKELADENQTLKEANLLNAVIV 123 (127)
T ss_dssp CCEEEEETTTTEEEEECCSSCBHHHHHHHHHHHCSGGGTSCEEEEE-TTTTEECCSTTCBHHHHTCSSCEEE
T ss_pred EEEEEECCCCCEEEEEeCCCCCHHHHHHHHHHhCcCCCCCCeEEec-CCCCCCCCCCCCcHHHCCCcCceEE
Confidence 6788886 6777778899999999999999986 345566677762 255566665 589999999985443
No 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=78.04 E-value=2.4 Score=44.23 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=50.5
Q ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCC-CCCcccccccc---C-----CCCCEEEEEccCcch
Q psy11202 12 NSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKI-PSDDTKLADTN---A-----TDGFKLMVMGSLEQS 82 (360)
Q Consensus 12 ~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~-l~D~~~L~~~~---l-----~~g~~i~l~gs~~~~ 82 (360)
..+.+.+.+.++.|+.+|+..|++.|||+++.|-++ +.++. +......+.+- . ...+.+..+-..+..
T Consensus 320 ~~~~~~~~i~~~~tl~~l~~~i~~~T~i~~~~q~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (676)
T 3qa8_A 320 SGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQELL---QASGLALNSAQPLTQYVIDCTVIDGRQGEGDLIFLFDNRKT 396 (676)
T ss_dssp SSCCCEEECCTTCCHHHHHHHHHTTSCCCSTTCEEE---SSSSCCCCTTSCGGGSCCCSCC-------CCCEEECSSCC-
T ss_pred ccccceeecCCCccHHHHHHHHHHHhCCCHHHHHHH---hccCCCCCCCcchhhheeccccccccCCCCceEEEEecccc
Confidence 344567788899999999999999999999999999 44443 33333444331 1 112233333223222
Q ss_pred hhhccCCCCCccccccccc
Q psy11202 83 IQEASTKPLDIPEIVDDFD 101 (360)
Q Consensus 83 i~~~~~~~~~~~~~~~d~~ 101 (360)
..+.+-.+...|++|+++-
T Consensus 397 ~~~~~~~~~~~~~~v~~~~ 415 (676)
T 3qa8_A 397 VYEPQISLPAHPESVSIVL 415 (676)
T ss_dssp -----CCCCCCCCCHHHHH
T ss_pred cccCCCCCCCCChHHHHHH
Confidence 2122233455777787774
No 282
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=77.88 E-value=5.5 Score=30.49 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=36.0
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccC
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPER 43 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~r 43 (360)
+|+|++.++|....+.++++.+..+|.+++.+..++++..
T Consensus 6 ~vkvK~~~~gdi~~~~v~~~i~~~~L~~kv~~~~~~~~~~ 45 (89)
T 1vd2_A 6 QVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQ 45 (89)
T ss_dssp CEEEEEESSSCEEEEEECTTCCHHHHHHHHHHHTTCCSSC
T ss_pred eEEEEEEeCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCC
Confidence 5888999999999999999999999999999999987544
No 283
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=76.87 E-value=2.9 Score=33.44 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=44.5
Q ss_pred CCceEEEEEEE--------CCe-EEEEEeCC---CCCHHHHHHHHHHHhCCCccCeeeeccccC-CCC------CCCccc
Q psy11202 1 MGDSLNLIIKW--------NSK-EYKTSLSK---SNTVLELKQEILKQTGVNPERQKLLNLKHA-GKI------PSDDTK 61 (360)
Q Consensus 1 m~~~i~i~vk~--------~g~-~~~i~v~~---~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~k-gk~------l~D~~~ 61 (360)
|+++|+|+|+. +++ .++|+++. ..||.+|-..|.+.. |..+..|+ .. |++ +-++..
T Consensus 8 ~~~~M~v~V~~~~~Lr~~~g~~~~~~vel~~~~~~~TV~~Ll~~L~~~~--~~~~~~lf---~~~g~lr~~i~VlVN~~d 82 (114)
T 1wgk_A 8 MAAPLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNL--LKERPELF---IQGDSVRPGILVLINDAD 82 (114)
T ss_dssp CCCCEEEEEEECTTTGGGTTTCSEEEEEECCCSSCCBHHHHHHHHTTTT--CCSCHHHH---CCSSSCCSSEEEEESSSB
T ss_pred cCCCcEEEEEEchHHHHHhCCceEEEEEeCCCCCCCCHHHHHHHHHHHc--cchhHhhC---ccCCcccCCeEEEECCee
Confidence 55568888885 222 57788884 369999988888776 44455555 22 221 112222
Q ss_pred ---cc--cccCCCCCEEEEEc
Q psy11202 62 ---LA--DTNATDGFKLMVMG 77 (360)
Q Consensus 62 ---L~--~~~l~~g~~i~l~g 77 (360)
+. +..|++|+.|.++=
T Consensus 83 i~~l~gldt~L~dGDeV~iip 103 (114)
T 1wgk_A 83 WELLGELDYQLQDQDSILFIS 103 (114)
T ss_dssp HHHHCTTTCBCCSSEEEEEEE
T ss_pred eeccCCcCcCCCCCCEEEEeC
Confidence 22 24689999988763
No 284
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=76.78 E-value=0.79 Score=42.93 Aligned_cols=39 Identities=10% Similarity=0.265 Sum_probs=30.9
Q ss_pred ecCccHHHHHHHHhcCCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 162 LMRPYLHEFLTSAYKNYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 162 ~~RP~l~eFL~~l~~~yeivIwTas~~~ya~~il~~L~~ 200 (360)
..+|++.++|+.+.+++.++|+|+....|+..++..+++
T Consensus 103 ~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 103 KFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGV 141 (332)
T ss_dssp CBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCceEEEcccchhhhh
Confidence 346777788888877788899999888899888887754
No 285
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=76.31 E-value=3.8 Score=28.88 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=39.5
Q ss_pred EEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 9 IKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 9 vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|+-+|+.+++ ...||.+|.+.+ ++++..-.+. ..|.....+ .+.+..|++|+.|-++
T Consensus 2 i~vNg~~~~~---~~~tv~~ll~~l----~~~~~~v~va---vN~~~v~~~-~~~~~~L~dgD~v~i~ 58 (64)
T 2cu3_A 2 VWLNGEPRPL---EGKTLKEVLEEM----GVELKGVAVL---LNEEAFLGL-EVPDRPLRDGDVVEVV 58 (64)
T ss_dssp EEETTEEECC---TTCCHHHHHHHH----TBCGGGEEEE---ETTEEEEGG-GCCCCCCCTTCEEEEE
T ss_pred EEECCEEEEc---CCCcHHHHHHHc----CCCCCcEEEE---ECCEECCcc-ccCCcCCCCCCEEEEE
Confidence 4567876654 568999998877 4565555444 677665433 4566679999999876
No 286
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=75.96 E-value=0.82 Score=36.52 Aligned_cols=45 Identities=20% Similarity=0.267 Sum_probs=30.4
Q ss_pred CCceEEEEEEECC-------eEEEEEeCC----CCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 1 MGDSLNLIIKWNS-------KEYKTSLSK----SNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 1 m~~~i~i~vk~~g-------~~~~i~v~~----~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
|++.|+|+|++.| +...++++. ..||.+|=..|.+.. +..+..|+
T Consensus 1 ~~~~m~v~V~f~g~l~~l~g~~~~v~l~~~~g~~~TV~dLl~~L~~~~--~~~r~~lf 56 (110)
T 2k9x_A 1 MSNHNHITVQFAGGCELLFAKQTSLQLDGVVPTGTNLNGLVQLLKTNY--VKERPDLL 56 (110)
T ss_dssp CCCSSCCEEEEESSCGGGTTSCSEECCCCSCGGGCCHHHHHHHHTTTT--CCSCHHHH
T ss_pred CCCccEEEEEEEecHHHHhCCeEEEEeCCcCCCCccHHHHHHHHHHHc--cccchhhE
Confidence 7777888888633 346677773 258999877777665 44566665
No 287
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=75.74 E-value=20 Score=27.19 Aligned_cols=65 Identities=23% Similarity=0.277 Sum_probs=41.6
Q ss_pred eEEEEEEE--------CCeEEEEEeCCCCCHHHHHHHHHHHhC-CC----------ccCeeeeccccCCCCCCCcccccc
Q psy11202 4 SLNLIIKW--------NSKEYKTSLSKSNTVLELKQEILKQTG-VN----------PERQKLLNLKHAGKIPSDDTKLAD 64 (360)
Q Consensus 4 ~i~i~vk~--------~g~~~~i~v~~~~Tv~~LK~~I~~~tg-Vp----------~~rQKLlgl~~kgk~l~D~~~L~~ 64 (360)
+++|+|++ +.....++++...||.+|.+.|..... +. ...-.+. .+|..... +
T Consensus 9 ~~~v~V~~FA~lre~~g~~~~~~e~~~~~Tv~~Ll~~L~~~~p~l~~~l~~~~g~~~~~v~v~---VNg~~v~~-----~ 80 (98)
T 1vjk_A 9 SVKVKVKYFARFRQLAGVDEEEIELPEGARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIA---VNGRYVSW-----D 80 (98)
T ss_dssp CEEEEEEECTHHHHHHSSSEEEEEECTTCBHHHHHHHHHHHCGGGGGSCBCSSSCTTSSBEEE---ETTBCCCT-----T
T ss_pred cEEEEEEEhHHHHHHhCCCeEEEECCCCCCHHHHHHHHHhHChhHHHHhhccccccCCcEEEE---ECCEECCC-----C
Confidence 57778875 223567888888999999999987641 10 1112223 46655542 3
Q ss_pred ccCCCCCEEEEE
Q psy11202 65 TNATDGFKLMVM 76 (360)
Q Consensus 65 ~~l~~g~~i~l~ 76 (360)
..|++|+.|.++
T Consensus 81 ~~L~dGDeV~i~ 92 (98)
T 1vjk_A 81 EELKDGDVVGVF 92 (98)
T ss_dssp CBCCTTCEEEEE
T ss_pred CCCCCCCEEEEE
Confidence 458899998776
No 288
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=73.13 E-value=2.7 Score=31.25 Aligned_cols=61 Identities=20% Similarity=0.195 Sum_probs=42.3
Q ss_pred EEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCC-ccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 8 IIKWNSKEYKTSLSKSNTVLELKQEILKQTGVN-PERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 8 ~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp-~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
+|.-+|+.+++..+...||.+|-+++ |++ ++.--+. ++|.++..+ .+.+..|++|++|-++
T Consensus 2 ~I~vNGe~~e~~~~~~~Tl~~LL~~l----~~~~~~~vAVa---vNg~iVpr~-~~~~~~L~dGD~IEIv 63 (78)
T 2k5p_A 2 NLTVNGKPSTVDGAESLNVTELLSAL----KVAQAEYVTVE---LNGEVLERE-AFDATTVKDGDAVEFL 63 (78)
T ss_dssp EEEETTEEEECSSCSCEEHHHHHHHH----TCSCTTTCCEE---ETTEECCTT-HHHHCEECSSBCEEEC
T ss_pred EEEECCEEEEcCCCCCCcHHHHHHHc----CCCCCCcEEEE---ECCEECChH-HcCcccCCCCCEEEEE
Confidence 35557886665321568999987655 677 6665555 688776544 5777789999999776
No 289
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=72.75 E-value=3.7 Score=30.01 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=41.6
Q ss_pred EEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 9 IKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 9 vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|.-+|+.+++ ...||.+|-++ .|++++.--+. ++|.++..+ .+.+..|++|++|-++
T Consensus 3 I~vNG~~~e~---~~~Tl~~LL~~----l~~~~~~vAV~---vNg~iVpr~-~~~~~~L~dGD~veIv 59 (73)
T 2kl0_A 3 VTINGEQREV---QSASVAALMTE----LDCTGGHFAVA---LNYDVVPRG-KWDETPVTAGDEIEIL 59 (73)
T ss_dssp EEETTEEECC---CCSBHHHHHHH----TTCCSSSCEEE---ESSSEECHH-HHTTCBCCTTCEEEEE
T ss_pred EEECCEEEEc---CCCcHHHHHHH----cCCCCCcEEEE---ECCEECChH-HcCcccCCCCCEEEEE
Confidence 4556886665 56899998654 47888776655 688776543 5777889999999876
No 290
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=72.09 E-value=1 Score=40.64 Aligned_cols=17 Identities=24% Similarity=0.216 Sum_probs=14.7
Q ss_pred CCceEEeecccceeecC
Q psy11202 137 GKKLLVLDIDYTLFDHR 153 (360)
Q Consensus 137 ~kk~LVLDLD~TLv~~~ 153 (360)
..+.++|||||||+++.
T Consensus 9 ~ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 9 EVTVILLDIEGTTTPIA 25 (261)
T ss_dssp TCCEEEECCBTTTBCHH
T ss_pred CCCEEEEecCCCccchh
Confidence 46899999999999863
No 291
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=68.15 E-value=3.7 Score=29.09 Aligned_cols=58 Identities=19% Similarity=0.281 Sum_probs=39.1
Q ss_pred EEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 9 IKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 9 vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
|+-+|+.+ +++...||.+|.+.+ ++++..-.+. ..|.....+ .+.+..|++|+.|-++
T Consensus 3 i~vNg~~~--~~~~~~tv~~ll~~l----~~~~~~v~va---vN~~~v~~~-~~~~~~L~~gD~v~i~ 60 (66)
T 1f0z_A 3 ILFNDQAM--QCAAGQTVHELLEQL----DQRQAGAALA---INQQIVPRE-QWAQHIVQDGDQILLF 60 (66)
T ss_dssp EEESSCEE--CCCTTCCHHHHHHHH----TCCCSSEEEE---ETTEEECHH-HHTTCCCCTTEEECEE
T ss_pred EEECCEEE--EcCCCCcHHHHHHHc----CCCCCCEEEE---ECCEECCch-hcCCcCCCCCCEEEEE
Confidence 55577755 456778999998887 5665554444 577665432 3555678999999766
No 292
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=66.76 E-value=2.1 Score=38.98 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=14.5
Q ss_pred CceEEeecccceeecCC
Q psy11202 138 KKLLVLDIDYTLFDHRS 154 (360)
Q Consensus 138 kk~LVLDLD~TLv~~~~ 154 (360)
.++++||+||||+++..
T Consensus 32 i~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CCEEEEECCCCCBCSCC
T ss_pred CCEEEEeCCCCCcCCCE
Confidence 36899999999999754
No 293
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=61.01 E-value=9.2 Score=29.76 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=32.5
Q ss_pred eEEEEEEEC--------CeEEEEEeCCCCCHHHHHHHHHHHhCCC
Q psy11202 4 SLNLIIKWN--------SKEYKTSLSKSNTVLELKQEILKQTGVN 40 (360)
Q Consensus 4 ~i~i~vk~~--------g~~~~i~v~~~~Tv~~LK~~I~~~tgVp 40 (360)
+|+|+|.++ +..+.|-|+++.+..+|..+|.++.+++
T Consensus 5 sikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI~~Kl~~~ 49 (98)
T 1q1o_A 5 SILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNT 49 (98)
T ss_dssp CEEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred cEEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHHHHHHcCC
Confidence 588888888 6678899999999999999999998765
No 294
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=59.16 E-value=42 Score=26.11 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=38.2
Q ss_pred CCceEEEEEEECCeEEEEEeCC--CCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSK--SNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~--~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
|...++++|.++|..+.+.|+- +.|-.+|...+....|+..-.-|-+
T Consensus 11 m~~~v~lkV~f~ge~~rF~Vs~~~~~tweel~~mvk~~f~L~~~~IkY~ 59 (101)
T 1wj6_A 11 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYL 59 (101)
T ss_dssp SCSCEEEEEEETTEEEEEEESCTTTSCHHHHHHHHHHHHCCSSBCCEEE
T ss_pred cCccEEEEEEEcCCeeEEEecCCCCCCHHHHHHHHHHHcCCCceEEEEe
Confidence 5667999999999999877744 7899999999999999875544433
No 295
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=58.95 E-value=35 Score=25.88 Aligned_cols=42 Identities=12% Similarity=0.138 Sum_probs=36.4
Q ss_pred CCceEEEEEEECCeEEEEEeCC--CCCHHHHHHHHHHHhCCCcc
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSK--SNTVLELKQEILKQTGVNPE 42 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~--~~Tv~~LK~~I~~~tgVp~~ 42 (360)
|...++++|.++|..+.+.|+- +.|-.+|...+....|+..-
T Consensus 3 ~~~~v~lkV~f~ge~~rf~vs~~~~~tweel~~mvk~~f~L~~~ 46 (87)
T 2bkf_A 3 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTI 46 (87)
T ss_dssp CCCCEEEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHTCSSE
T ss_pred CCceEEEEEEEcCCeeEEEeccCCCCCHHHHHHHHHHHcCCCce
Confidence 6667999999999999977754 78999999999999998744
No 296
>2ylm_A Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70A {Homo sapiens}
Probab=58.73 E-value=7 Score=39.48 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=28.4
Q ss_pred EEEeCCCCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 17 KTSLSKSNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 17 ~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
.+.|..++|+.+||++|++.+|+|+++|+|=
T Consensus 39 ~~rv~k~~~~~~l~~~va~~lg~~~~~~RlW 69 (530)
T 2ylm_A 39 VFKVLKNSSLAEFVQSLSQTMGFPQDQIRLW 69 (530)
T ss_dssp EEEEETTSBHHHHHHHHHHHHTSCGGGEEEE
T ss_pred eEEEcCcCCHHHHHHHHHHHhCcCcccEEEE
Confidence 4678889999999999999999999999984
No 297
>2jrh_A Mitogen-activated protein kinase kinase kinase 3; kinase signaling domain, transferase; NMR {Homo sapiens} PDB: 2pph_A
Probab=57.37 E-value=31 Score=26.26 Aligned_cols=40 Identities=10% Similarity=0.191 Sum_probs=35.5
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCC
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVN 40 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp 40 (360)
|...++|+.-+.|.+..|.++-.-...+|.+++...+|-+
T Consensus 1 ~q~dvRIKfE~~gEKRIi~f~RPvkf~dl~qkv~~afGq~ 40 (94)
T 2jrh_A 1 MQSDVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQP 40 (94)
T ss_dssp -CCCEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHCSS
T ss_pred CCCceEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCe
Confidence 6667899999999999999999999999999999999843
No 298
>4e71_A Plexin-B2, MM1; transmembrane, signaling, RBD, structural genomics consortium, SGC, signaling protein; 2.26A {Homo sapiens}
Probab=56.96 E-value=27 Score=27.71 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=42.8
Q ss_pred eEEEEEEEC---CeEEEEEeCCCCCHHHHHHHHHHHh--CCCccCe---eeecccc----CCCCCCCc------------
Q psy11202 4 SLNLIIKWN---SKEYKTSLSKSNTVLELKQEILKQT--GVNPERQ---KLLNLKH----AGKIPSDD------------ 59 (360)
Q Consensus 4 ~i~i~vk~~---g~~~~i~v~~~~Tv~~LK~~I~~~t--gVp~~rQ---KLlgl~~----kgk~l~D~------------ 59 (360)
+++++|.+. +..+++.|-..+||.+.|++|-... |+|-+.. -=+.+.+ .|.+|.|.
T Consensus 11 ~ltl~v~~~~~~~~~i~vkVLdCDTItQvKeKiLd~vyk~~pyS~rP~~~~~dLEwr~g~~~~iL~D~D~ts~~~~~wkr 90 (111)
T 4e71_A 11 PLTVSVIVQDEGVDAIPVKVLNCDTISQVKEKIIDQVYRGQPCSCWPRPDSVVLEWRPGSTAQILSDLDLTSQREGRWKR 90 (111)
T ss_dssp EEEEEEEETTSCCCCEEEEEETTCBHHHHHHHHHHHHTC---------CCSEEEEEC--CCCEECCSSCTTSCC---CCC
T ss_pred EEEEEEEecCCCCCceeeeeeccCcHHHHHHHHHHHHHcCCccccCCCCCceeeEEecCCCCccccccCccceecCcceE
Confidence 467777653 4457788878899999999997763 4443321 0111112 22334442
Q ss_pred -cccccccCCCCCEEEEE
Q psy11202 60 -TKLADTNATDGFKLMVM 76 (360)
Q Consensus 60 -~~L~~~~l~~g~~i~l~ 76 (360)
.+|..|++.+|+++-|+
T Consensus 91 LNTL~HY~V~dgatl~l~ 108 (111)
T 4e71_A 91 VNTLMHYNVRDGATLILS 108 (111)
T ss_dssp CCBHHHHTCCTTCEEEEE
T ss_pred ecchhhcCCCCCCEEEEE
Confidence 35667789999998765
No 299
>2qjl_A URM1, ubiquitin-related modifier 1; ubiquitin-like protein, signaling protein; 1.44A {Saccharomyces cerevisiae} PDB: 2pko_A 2ax5_A
Probab=56.45 E-value=57 Score=24.64 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=19.8
Q ss_pred eEEEEEeC--CCCCHHHHHHHHHHHh
Q psy11202 14 KEYKTSLS--KSNTVLELKQEILKQT 37 (360)
Q Consensus 14 ~~~~i~v~--~~~Tv~~LK~~I~~~t 37 (360)
...+++++ ...||.+|.+.|.+..
T Consensus 20 ~~~~~~l~~~~~~Tv~~L~~~L~~~~ 45 (99)
T 2qjl_A 20 RVHKIKMDKEDPVTVGDLIDHIVSTM 45 (99)
T ss_dssp CEEEEEECSCSCCBHHHHHHHHHHHT
T ss_pred cEEEEecCCCCCCcHHHHHHHHHHHC
Confidence 45677877 6789999999998876
No 300
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=54.09 E-value=35 Score=25.13 Aligned_cols=55 Identities=11% Similarity=0.206 Sum_probs=35.1
Q ss_pred eEEEEEeCCCCCHHHHHHHHHHHhC-CC----c------cCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 14 KEYKTSLSKSNTVLELKQEILKQTG-VN----P------ERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 14 ~~~~i~v~~~~Tv~~LK~~I~~~tg-Vp----~------~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
....++++...||.+|.+.|..... +. . ..-.++ .+|..... +..|++|+.|.++
T Consensus 18 ~~~~~~~~~~~Tv~~ll~~L~~~~p~~~~~~l~~~g~l~~~~~v~---VN~~~v~~-----~~~l~~gDeV~i~ 83 (89)
T 3po0_A 18 RTVRVDVDGDATVGDALDALVGAHPALESRVFGDDGELYDHINVL---RNGEAAAL-----GEATAAGDELALF 83 (89)
T ss_dssp SEEEEECCTTCBHHHHHHHHHHHCGGGHHHHBCTTSCBCTTSEEE---ETTEECCT-----TSBCCTTCEEEEE
T ss_pred CeEEEECCCCCcHHHHHHHHHHHCcHHHHHHhccCCcccccEEEE---ECCEECCC-----CcccCCCCEEEEE
Confidence 5577888888999999999987752 10 0 001222 45554433 3358889988776
No 301
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=53.21 E-value=41 Score=25.86 Aligned_cols=66 Identities=9% Similarity=0.021 Sum_probs=44.9
Q ss_pred eEEEEEEE--CCeE--EEEEeCCCCCHHHHHHHHHH---HhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 4 SLNLIIKW--NSKE--YKTSLSKSNTVLELKQEILK---QTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 4 ~i~i~vk~--~g~~--~~i~v~~~~Tv~~LK~~I~~---~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
+|.|.|-| ..+. +.++++..+||.++=+++.- .+.|.....++. ..|+..+.+ ..|++|+.|-+.
T Consensus 12 ~~~v~v~ya~p~rq~~~~~~v~~g~TV~daI~~~gi~~~~peIdl~~~~V~---Vng~~v~~d-----~~L~dGDRVEIy 83 (97)
T 2hj1_A 12 QINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIG---IFSRPIKLT-----DVLKEGDRIEIY 83 (97)
T ss_dssp EEEEEEEEEETTEEEEEEEEEETTCBHHHHHHHHTHHHHCTTCCTTTSEEE---EEECSCCTT-----CBCCTTCEEEEC
T ss_pred eEEEEEEEeCCCCCEEEEEEcCCCCcHHHHHHHcCCCccCCcccccccEEE---EcCEECCCC-----ccCCCCCEEEEE
Confidence 46777775 4443 45778899999998776642 234555566766 688877633 348899999766
Q ss_pred c
Q psy11202 77 G 77 (360)
Q Consensus 77 g 77 (360)
-
T Consensus 84 r 84 (97)
T 2hj1_A 84 R 84 (97)
T ss_dssp C
T ss_pred e
Confidence 4
No 302
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=51.11 E-value=8.2 Score=37.24 Aligned_cols=41 Identities=12% Similarity=-0.104 Sum_probs=37.9
Q ss_pred eeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCC
Q psy11202 160 YELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGV 200 (360)
Q Consensus 160 ~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~ 200 (360)
.+..+|++.+.+++|.. +++++|-|++...+++++.+.+|+
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 45679999999999987 899999999999999999999976
No 303
>2c7h_A RBBP6, retinoblastoma-binding protein 6, isoform 3; P53-associated, mRNA processing, splicing-associated, oesophageal cancer; NMR {Homo sapiens}
Probab=47.90 E-value=14 Score=27.94 Aligned_cols=36 Identities=8% Similarity=0.134 Sum_probs=26.0
Q ss_pred EEEEEEECCeEEEEEeCCC-CCHHHHHHHHHHHhCCC
Q psy11202 5 LNLIIKWNSKEYKTSLSKS-NTVLELKQEILKQTGVN 40 (360)
Q Consensus 5 i~i~vk~~g~~~~i~v~~~-~Tv~~LK~~I~~~tgVp 40 (360)
|..+.|.+...-.|.++.. .+|.+||.+|.+..+.-
T Consensus 9 V~YKFkS~k~~~~v~fdG~~Isv~dLKr~I~~~~kl~ 45 (86)
T 2c7h_A 9 VHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLK 45 (86)
T ss_dssp EEEEETTCSSEEEEEESSSEEEHHHHHHHHHHHHTCC
T ss_pred EEEEEeecCCcceEEEcCCEEEHHHHHHHHHHHhCCC
Confidence 4444555555566998854 79999999999887653
No 304
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=47.23 E-value=38 Score=27.49 Aligned_cols=55 Identities=16% Similarity=0.168 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHhCCCc-------cCeeeeccccCCCCCCC--ccccccccCCCCCEEEEEccCcc
Q psy11202 23 SNTVLELKQEILKQTGVNP-------ERQKLLNLKHAGKIPSD--DTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 23 ~~Tv~~LK~~I~~~tgVp~-------~rQKLlgl~~kgk~l~D--~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|+.+|=+.|....|..- ..|+|| |--- ..| +.+|+++|+++|+.|+++---++
T Consensus 19 ~~TL~dLV~~l~~~~gy~~eiSV~~~~~~rLL---yD~D-fDDnl~k~L~dLgv~~gsfLtv~DEdde 82 (127)
T 3onh_A 19 KMKLSDFVVLIREKYSYPQDISLLDASNQRLL---FDYD-FEDLNDRTLSEINLGNGSIILFSDEEGD 82 (127)
T ss_dssp HCBHHHHHHHHHHHHTCCSSEEEEETTTTEEE---EETT-BCTTTTSBTTTTTCCTTCEEEEEESCCS
T ss_pred ccCHHHHHHHHHHhcCCCCcEEEEecCCCCeE---eCCC-ccccccCcHHHcCcCCCcEEEEEccccc
Confidence 4799999988988888652 235555 3221 122 36899999999999998865433
No 305
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=46.97 E-value=13 Score=35.83 Aligned_cols=37 Identities=24% Similarity=0.097 Sum_probs=22.7
Q ss_pred hHHHhhHHhhhhccccCCCCCCCCceEEeecccceee
Q psy11202 115 YLAKIDKRIQDYQIDILNEPRPGKKLLVLDIDYTLFD 151 (360)
Q Consensus 115 ~l~kl~~ri~~y~i~i~~~~~~~kk~LVLDLD~TLv~ 151 (360)
+.+.|++-++++.-.--..-.+.++.-|||.||||+.
T Consensus 17 ~~~~l~~~I~~~~~~s~~~~~~~~~~AVFD~DgTl~~ 53 (385)
T 4gxt_A 17 IYLAINKLIAKHGKDNEAYNPDNKPFAVFDWDNTSII 53 (385)
T ss_dssp HHHHHHHHHHHHSTTSTTCCTTSEEEEEECCTTTTEE
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCEEEEcCCCCeec
Confidence 3455666665554321111223667899999999994
No 306
>3r8s_T 50S ribosomal protein L23; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_T 3j19_T 2wwq_T 3oat_T* 3oas_T* 3ofd_T 3ofc_T 3ofr_T* 3ofz_T* 3og0_T 3ofq_T 3r8t_T 2j28_T 3e1b_M 3e1d_M 3iy9_T 3i1n_T 1p85_R 1p86_R 1vs8_T ...
Probab=46.51 E-value=31 Score=26.40 Aligned_cols=41 Identities=27% Similarity=0.238 Sum_probs=34.5
Q ss_pred CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCC
Q psy11202 13 SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKI 55 (360)
Q Consensus 13 g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~ 55 (360)
..+|.+.|++.+|=-+.|+.++.++||.+..-.-+. .+|+.
T Consensus 27 ~n~~~F~V~~~AnK~eIK~AVE~lf~VkV~~VnT~~--~~gK~ 67 (93)
T 3r8s_T 27 SNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLV--VKGKV 67 (93)
T ss_dssp TSEEEEEECSSCCHHHHHHHHHHHSCCCCCEEEEEE--ECCCB
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHcCCceEEEEEEE--eCCce
Confidence 357999999999999999999999999998877653 45543
No 307
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=46.38 E-value=19 Score=30.56 Aligned_cols=31 Identities=10% Similarity=0.210 Sum_probs=23.9
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHHHH
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELKQE 32 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~ 32 (360)
|. .+.|++..+|+.++++++++.|+.++=..
T Consensus 1 M~-~~~i~~~vNG~~~~~~v~~~~tLLd~LR~ 31 (166)
T 1n62_A 1 MA-KAHIELTINGHPVEALVEPRTLLIHFIRE 31 (166)
T ss_dssp ---CEEEEEEETTEEEEEEECTTCBHHHHHHH
T ss_pred CC-CceEEEEECCEEEEEecCCCCcHHHHHHH
Confidence 54 35677888999999999999999986444
No 308
>1wgy_A RAP guanine nucleotide exchange factor 5; ubiquitin fold, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=45.86 E-value=58 Score=25.45 Aligned_cols=73 Identities=10% Similarity=0.114 Sum_probs=48.8
Q ss_pred EEEEEEECCeEE-EEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCC--CCCCccccccccCCCCCEEEEEc
Q psy11202 5 LNLIIKWNSKEY-KTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGK--IPSDDTKLADTNATDGFKLMVMG 77 (360)
Q Consensus 5 i~i~vk~~g~~~-~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk--~l~D~~~L~~~~l~~g~~i~l~g 77 (360)
+...|=....+| ++.+..++|+.+++..+.++.+..-+.++|.-.++.|- .++++..--.-.|..+.+|.+--
T Consensus 10 i~~~Vy~~Dhsy~tvr~~v~~sa~eIl~~va~kl~~~~e~l~Lv~v~ssGEk~~lqp~d~si~tsL~~NgRLfvc~ 85 (104)
T 1wgy_A 10 IFCHVYITEHSYVSVKAKVSSIAQEILKVVAEKIQYAEEDLALVAITFSGEKHELQPNDLVISKSLEASGRIYVYR 85 (104)
T ss_dssp CCEEEECSSSCEEEECCCTTCBSHHHHHHHHHHHTSCGGGEEEEEECSSCCCCBCCTTSBSSCCSSCSSCEEEEEE
T ss_pred eEEEEEeccCceEEEEEeccchHHHHHHHHHHHhcCCccceEEEEEccCCcEeecCCcceEEEeeccccceEEEee
Confidence 344455445555 58899999999999999999998887899986666662 34433222222345566777653
No 309
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=44.52 E-value=21 Score=30.16 Aligned_cols=31 Identities=13% Similarity=0.238 Sum_probs=23.7
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHHHH
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELKQE 32 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~ 32 (360)
|. .+.|++..+|+.++++++++.|+.++=..
T Consensus 1 M~-~~~i~~~vNG~~~~~~v~~~~tLLd~LR~ 31 (163)
T 1ffv_A 1 MA-KKIITVNVNGKAQEKAVEPRTLLIHFLRE 31 (163)
T ss_dssp ---CEEEEEEETTEEEEEEECTTCBHHHHHHH
T ss_pred CC-CceEEEEECCEEEEEecCCCCcHHHHHHh
Confidence 54 34677788999999999999999986443
No 310
>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=42.20 E-value=62 Score=25.15 Aligned_cols=37 Identities=5% Similarity=0.125 Sum_probs=33.5
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCC
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVN 40 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp 40 (360)
.++|+.-|+|.+..|.++-.-+..+|..++.+.+|-+
T Consensus 8 dvRiKfE~~GEkRIi~f~RPv~f~eL~~Kv~~~fGq~ 44 (103)
T 2cu1_A 8 DVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQS 44 (103)
T ss_dssp EEEEEEEETTEEEEEEEESSCCHHHHHHHHHHHHSSC
T ss_pred cEEEEEEecCeEEEEeccCCccHHHHHHHHHHHhCCe
Confidence 4778888999999999999999999999999999953
No 311
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=41.90 E-value=72 Score=24.75 Aligned_cols=61 Identities=18% Similarity=0.241 Sum_probs=43.4
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHhCCCccC--eeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 15 EYKTSLSKSNTVLELKQEILKQTGVNPER--QKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 15 ~~~i~v~~~~Tv~~LK~~I~~~tgVp~~r--QKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
++=|-.. ++.+|+.+.....+++... -.|. |...|..+.|+.-+..+ .++..+|++...+.
T Consensus 31 k~GV~A~---SL~EL~~K~~~~l~l~~~~~~~~lv-LeeDGT~VddEeYF~tL--p~nT~lmvL~~ge~ 93 (100)
T 1f2r_I 31 QHGVAAS---SLEELRSKACELLAIDKSLTPITLV-LAEDGTIVDDDDYFLCL--PSNTKFVALACNEK 93 (100)
T ss_dssp EEEEEES---SHHHHHHHHHHHHCCCGGGCSCEEE-ESSSCCBCCSSSSSSSS--CSCCEEEEECSSSC
T ss_pred EEeEEcC---CHHHHHHHHHHHhccCCCCCceEEE-EeeCCcEEechhHhhcC--CCCCEEEEEcCCCc
Confidence 4445544 8999999999999998642 3332 43578888888777766 47888888765544
No 312
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=41.78 E-value=26 Score=29.42 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=24.3
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHH
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEI 33 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I 33 (360)
...|++..+|+.|.++++++.|+.++=...
T Consensus 2 ~~~i~~~vNG~~~~v~~~~~~tLL~~Lr~~ 31 (161)
T 1rm6_C 2 KNILRLTLNGRAREDLVPDNMLLLDYLRET 31 (161)
T ss_dssp EEEEEEEETTEEEEEEEETTCBHHHHHHHT
T ss_pred CceEEEEECCEEEEEecCCcCcHHHHHHHc
Confidence 355777789999999999999998875543
No 313
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=41.46 E-value=23 Score=29.97 Aligned_cols=29 Identities=14% Similarity=0.269 Sum_probs=24.8
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHH
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELK 30 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK 30 (360)
|. .+.|+++-+|+.++++++++.|+.++=
T Consensus 1 m~-~~~i~~~vNG~~~~v~v~p~~tLLd~L 29 (160)
T 3hrd_D 1 MN-KITINLNLNGEARSIVTEPNKRLLDLL 29 (160)
T ss_dssp CC-CEEEEEEETTEEEEEEECSSSBHHHHH
T ss_pred CC-cceEEEEECCEEEEEecCCCCCHHHHH
Confidence 54 467888899999999999999999863
No 314
>1vq8_S 50S ribosomal protein L23P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.12.1.1 PDB: 1vq4_S* 1vq5_S* 1vq6_S* 1vq7_S* 1s72_S* 1vq9_S* 1vqk_S* 1vql_S* 1vqm_S* 1vqn_S* 1vqo_S* 1vqp_S* 1yhq_S* 1yi2_S* 1yij_S* 1yit_S* 1yj9_S* 1yjn_S* 1yjw_S* 2otj_S* ...
Probab=41.02 E-value=29 Score=26.12 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=31.8
Q ss_pred CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 13 SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 13 g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
.++|.+.|++.+|=.+.|+.+++++||.+..-.-+
T Consensus 22 ~n~~~F~V~~~AnK~qIK~ave~lf~VkV~~VNT~ 56 (85)
T 1vq8_S 22 QNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQ 56 (85)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHhCCCceEEEee
Confidence 45799999999999999999999999999887766
No 315
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.22 E-value=66 Score=24.53 Aligned_cols=62 Identities=15% Similarity=0.201 Sum_probs=43.3
Q ss_pred eEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 14 KEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 14 ~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.+|-|-.. ++.+|+.+..+..+++.+--.|. |...|..+.|+.-+..+. ++..+|++...+.
T Consensus 21 ~k~GV~A~---sL~EL~~K~~~~l~l~~~~~~lv-LeeDGT~VddEeyF~tLp--~nT~lmvL~~ge~ 82 (91)
T 2eel_A 21 SRRGVMAS---SLQELISKTLDALVIATGLVTLV-LEEDGTVVDTEEFFQTLG--DNTHFMILEKGQK 82 (91)
T ss_dssp CCEEEEES---SHHHHHHHHHHHTTCSSSCEEEE-ETTTCCBCCCHHHHTTSC--SSEEEEEEETTCC
T ss_pred eEEeEEcC---CHHHHHHHHHHHhcCCCCCcEEE-EeeCCcEEechhhhhhCC--CCCEEEEEcCCCc
Confidence 44445443 89999999999999975544443 434788888887777664 6777777765544
No 316
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=40.10 E-value=24 Score=25.18 Aligned_cols=54 Identities=6% Similarity=0.069 Sum_probs=35.1
Q ss_pred eEEEEEeCCCCCHHHHHHHHHHHhCCCccCe--eeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 14 KEYKTSLSKSNTVLELKQEILKQTGVNPERQ--KLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 14 ~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQ--KLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
....++++...||.+|.+.+..... ...+- .+. .+|.....+ ..|++|+.|-++
T Consensus 16 ~~~~~~~~~~~tv~~ll~~l~~~~p-~~~~v~~~v~---vNg~~v~~~-----~~L~~gD~V~i~ 71 (77)
T 2q5w_D 16 AQEDIVLEQALTVQQFEDLLFERYP-QINNKKFQVA---VNEEFVQKS-----DFIQPNDTVALI 71 (77)
T ss_dssp SEEECCCSSCEEHHHHHHHHHHHCG-GGTTCCCEEE---ETTEEECTT-----SEECTTCEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCc-chhcceEEEE---ECCEECCCC-----CCcCCCCEEEEE
Confidence 3456777778899999999877631 01122 333 577665433 358899998776
No 317
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=39.46 E-value=29 Score=29.24 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=24.2
Q ss_pred EEEEEEECCeEEEEEeCCCCCHHHHHHH
Q psy11202 5 LNLIIKWNSKEYKTSLSKSNTVLELKQE 32 (360)
Q Consensus 5 i~i~vk~~g~~~~i~v~~~~Tv~~LK~~ 32 (360)
+.|++..+|+.+.++++++.||.++=..
T Consensus 10 m~i~~~ing~~~~~~v~~~~tlL~~Lr~ 37 (168)
T 1t3q_A 10 MRISATINGKPRVFYVEPRMHLADALRE 37 (168)
T ss_dssp EEEEEEETTEEEEEEECTTSBHHHHHHH
T ss_pred ceEEEEECCEEEEEecCCCCcHHHHHHh
Confidence 7788899999999999999999886443
No 318
>2zjr_Q 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.12.1.1 PDB: 1sm1_R* 2aar_R 2d3o_R 2zjp_Q* 2zjq_Q 1nkw_R 3cf5_Q* 3dll_Q* 3pio_Q* 3pip_Q* 1nwy_R* 1nwx_R* 1xbp_R* 1pnu_R 1pny_R 1vor_U 1vou_U 1vow_U 1voy_U 1vp0_U
Probab=38.61 E-value=42 Score=25.77 Aligned_cols=38 Identities=29% Similarity=0.279 Sum_probs=33.0
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCC
Q psy11202 15 EYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGK 54 (360)
Q Consensus 15 ~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk 54 (360)
.|.+.|++.+|=.++|+.+++++||.+..-.-+. ..|+
T Consensus 24 ~y~F~V~~~anK~eIK~aVE~lf~VkV~~VNT~~--~~gK 61 (95)
T 2zjr_Q 24 VYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMN--VPGK 61 (95)
T ss_dssp CCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECC--BCCC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHhCCCceEEEeEE--eCCc
Confidence 3999999999999999999999999999888664 4554
No 319
>3tve_T 50S ribosomal protein L23; RNA, ribosome, tRNA, translation, mRNA; 3.10A {Thermus thermophilus} PDB: 3pyr_T 3pyo_T 3pyv_T 3pyt_T 3tvh_T 1n88_A 1vsa_R 1vsp_R 2hgj_W 2hgq_W 2hgu_W 2j01_X 2j03_X 2jl6_X 2jl8_X 2v47_X 2v49_X 2wdi_X 2wdj_X 2wdl_X ...
Probab=38.58 E-value=42 Score=25.60 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=33.8
Q ss_pred eEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCC
Q psy11202 14 KEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGK 54 (360)
Q Consensus 14 ~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk 54 (360)
.+|.+.|+..+|=-++|+.++.+++|.+..-.-+. ..|+
T Consensus 22 n~~~F~V~~~AnK~qIK~aVe~lf~VkV~~VnT~~--~~gK 60 (92)
T 3tve_T 22 GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLH--VRGK 60 (92)
T ss_dssp TEEEEEECTTCCHHHHHHHHHHHTTCCEEEEEEEE--ECCC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHhCCceeeeeeee--eCCc
Confidence 67999999999999999999999999998877653 4554
No 320
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=37.30 E-value=40 Score=24.14 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=33.1
Q ss_pred eEEEEEeCCCCCHHHHHHHHHHHhC-----CCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 14 KEYKTSLSKSNTVLELKQEILKQTG-----VNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 14 ~~~~i~v~~~~Tv~~LK~~I~~~tg-----Vp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
...+++ +...||.+|.+.|..... ++..+-.+. ++|..... +..|++|+.|.++
T Consensus 17 ~~~~~~-~~~~tv~~ll~~L~~~~p~~~~~l~~~~~~v~---vN~~~v~~-----~~~l~~gD~V~i~ 75 (81)
T 1fm0_D 17 DATEVA-ADFPTVEALRQHMAAQSDRWALALEDGKLLAA---VNQTLVSF-----DHPLTDGDEVAFF 75 (81)
T ss_dssp SEEEEC-SCCSBHHHHHHHHHTTCHHHHHHHCCTTCEEE---ETTEECCT-----TCBCCTTCEEEEE
T ss_pred CeEEEc-CCCCCHHHHHHHHHHHChhHHHHhcCCCEEEE---ECCEECCC-----CCCCCCCCEEEEe
Confidence 345566 567899999999875421 112222233 56665532 3358899998876
No 321
>2r2o_A Plexin-B1; effector domain, structural genomics, structural GEN consortium, SGC, glycoprotein, membrane, phosphorylation, R secreted, transmembrane; 2.00A {Homo sapiens} PDB: 2rex_A* 2jph_A
Probab=35.83 E-value=1.5e+02 Score=24.21 Aligned_cols=72 Identities=22% Similarity=0.308 Sum_probs=44.2
Q ss_pred EEEEEEEC-------CeEEEEEeCCCCCHHHHHHHHHHHh--CCCccC-----eeeeccc--cCCC-CCCCc--------
Q psy11202 5 LNLIIKWN-------SKEYKTSLSKSNTVLELKQEILKQT--GVNPER-----QKLLNLK--HAGK-IPSDD-------- 59 (360)
Q Consensus 5 i~i~vk~~-------g~~~~i~v~~~~Tv~~LK~~I~~~t--gVp~~r-----QKLlgl~--~kgk-~l~D~-------- 59 (360)
++|.|--. ...++|.|-..+||.++|++|-+.. |+|-+. .--+..+ -.|+ +|.|.
T Consensus 25 ltl~v~~~~~~~~~~~~~i~VkVLdCDTItQvKeKiLDavYk~~PySqRP~~~d~dLEwr~g~~g~liL~D~D~tS~~~~ 104 (138)
T 2r2o_A 25 LTLNALLAVGPGAGEAQGVPVKVLDCDTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSEVQG 104 (138)
T ss_dssp EEEEEEEC-------CCCEEEEEETTCBHHHHHHHHHHHHTTTSCGGGCCCGGGEEEEEECSSSCEEEECSSSTTCCEET
T ss_pred EEEEEEccCCcccccCCceeEEEeccccHHHHHHHHHHHHHcCCccccCCCccceeEEEecCCcCceEeeccCCcccccC
Confidence 56665542 2457888888999999999998774 444321 1111100 0122 23432
Q ss_pred -----cccccccCCCCCEEEEE
Q psy11202 60 -----TKLADTNATDGFKLMVM 76 (360)
Q Consensus 60 -----~~L~~~~l~~g~~i~l~ 76 (360)
.+|.-|+|++|+++-|+
T Consensus 105 ~wkrLNTL~HY~V~Dga~l~l~ 126 (138)
T 2r2o_A 105 LWRRLNTLQHYKVPDGATVALV 126 (138)
T ss_dssp TEEECCBHHHHTCCTTCEEEEE
T ss_pred CceeecchhccCCCCCCEEEEE
Confidence 26777899999999876
No 322
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=35.62 E-value=1.1e+02 Score=22.16 Aligned_cols=55 Identities=18% Similarity=0.171 Sum_probs=33.2
Q ss_pred EEeCCCCCHHHHHHHHHHHhC------CC-----ccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 18 TSLSKSNTVLELKQEILKQTG------VN-----PERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 18 i~v~~~~Tv~~LK~~I~~~tg------Vp-----~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
++++...||.+|.+.+..... +- ...-.+. ++|...... ...+..|++|+.|.++
T Consensus 19 ~~~~~~~tv~~ll~~l~~~~p~~~~~~l~~~~g~~~~v~v~---vN~~~v~~~-~~~~~~l~~gD~V~i~ 84 (90)
T 2g1e_A 19 ETFNGISKISELLERLKVEYGSEFTKQMYDGNNLFKNVIIL---VNGNNITSM-KGLDTEIKDDDKIDLF 84 (90)
T ss_dssp EEESSCCBHHHHHHHHHHHSCHHHHHHHCCSSCSTTTCEEE---ESSSBGGGT-CSSSCBCCTTCEEEEE
T ss_pred EEcCCCCcHHHHHHHHHHHCcchhhhccccccCcCcceEEE---ECCEEcccc-CCCCcCCCCCCEEEEe
Confidence 456666899999999987641 10 0122233 566654321 1234468999998876
No 323
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=33.69 E-value=63 Score=24.11 Aligned_cols=30 Identities=7% Similarity=0.052 Sum_probs=23.2
Q ss_pred CCceEEEEEEEC-CeEEEEEeCCCCCHHHHH
Q psy11202 1 MGDSLNLIIKWN-SKEYKTSLSKSNTVLELK 30 (360)
Q Consensus 1 m~~~i~i~vk~~-g~~~~i~v~~~~Tv~~LK 30 (360)
|+++++|++.+. +....+++++..|+.+.=
T Consensus 1 M~~~~~v~~~~~~~~~~~~~~~~g~tlL~a~ 31 (98)
T 1jq4_A 1 MQRVHTITAVTEDGESLRFECRSDEDVITAA 31 (98)
T ss_dssp CCCEEEEEEEETTTEEEEEEEESCCTHHHHH
T ss_pred CCCcEEEEEEecCCCcEEEEeCCCChHHHHH
Confidence 777788888753 666788899999998753
No 324
>3j21_T 50S ribosomal protein L23P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.17 E-value=48 Score=24.95 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=31.7
Q ss_pred CeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeee
Q psy11202 13 SKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLL 47 (360)
Q Consensus 13 g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLl 47 (360)
..+|.+.|+..+|=.+.|+.++.++||.+..-.-+
T Consensus 23 ~n~~~F~Vd~~AnK~qIK~AVe~lf~VkV~~VNTl 57 (86)
T 3j21_T 23 ENKLTFIVDRRATKQDIKRAVEEIFNVKVEKVNTL 57 (86)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEe
Confidence 46799999999999999999999999999887766
No 325
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=30.97 E-value=86 Score=28.22 Aligned_cols=44 Identities=14% Similarity=0.233 Sum_probs=36.2
Q ss_pred EEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccc
Q psy11202 5 LNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLK 50 (360)
Q Consensus 5 i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~ 50 (360)
|.+.|..-+.++.+.+++++|+.+|=++|.+..|+... ...||.
T Consensus 2 i~~~V~l~d~~~~~~v~~~tt~~el~~~v~~~l~L~e~--~~FgL~ 45 (294)
T 1ef1_A 2 ISVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREV--WFFGLQ 45 (294)
T ss_dssp EEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHTCCCG--GGEEEE
T ss_pred EEEEEEECCceEEEEECCCCcHHHHHHHHHHHcCCCCc--ceeEEE
Confidence 67888886678999999999999999999999998643 355554
No 326
>1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A
Probab=30.67 E-value=12 Score=27.30 Aligned_cols=48 Identities=21% Similarity=0.289 Sum_probs=30.7
Q ss_pred EEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 17 KTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 17 ~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
.++++...||.+|.+.+ ++++.+-.+. .+|.....+ ..|++|+.|-++
T Consensus 24 ~~~~~~~~Tv~dLl~~L----~~~~~~v~Va---vNg~~v~~~-----~~L~dGD~V~i~ 71 (77)
T 1rws_A 24 EIEWREGMKVRDILRAV----GFNTESAIAK---VNGKVVLED-----DEVKDGDFVEVI 71 (77)
T ss_dssp CCCCCSSCCHHHHHHTT----TCSSCSSCEE---ETTEEECSS-----SCCCSSCCCBCS
T ss_pred EEECCCCCcHHHHHHHh----CCCCcCEEEE---ECCEECCCC-----CCcCCCCEEEEE
Confidence 34566778999997766 4666554444 577666543 357788876543
No 327
>2v1y_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit alpha isoform; cancer, SH2 domain, SH3 domain, transferase, oncogen mutations, HOST-virus interaction; 2.4A {Bos taurus}
Probab=28.45 E-value=1.1e+02 Score=24.10 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=27.4
Q ss_pred ceEEEEEEE-CCeEEEEEeCCCCCHHHHHHHHHHHh
Q psy11202 3 DSLNLIIKW-NSKEYKTSLSKSNTVLELKQEILKQT 37 (360)
Q Consensus 3 ~~i~i~vk~-~g~~~~i~v~~~~Tv~~LK~~I~~~t 37 (360)
+.+.|.+-- .|--..++++.++|+.++|+.+.+.-
T Consensus 18 ~~v~v~~LlPnGi~i~l~~~~~~tl~eiK~~lw~eA 53 (108)
T 2v1y_A 18 PRILVECLLPNGMIVTLECLREATLITIKHELFKEA 53 (108)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCBHHHHHHHHHHHG
T ss_pred CcEEEEEEcCcEEEEEEEeeccccHHHHHHHHHHHH
Confidence 345555553 66667789999999999999999885
No 328
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=27.90 E-value=1e+02 Score=21.78 Aligned_cols=52 Identities=15% Similarity=0.234 Sum_probs=31.4
Q ss_pred EEEeCCCCCHHHHHHHHHHHhCCCc--cCeeeeccccCCCCCCCccccccccCCCCCEEEEE
Q psy11202 17 KTSLSKSNTVLELKQEILKQTGVNP--ERQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVM 76 (360)
Q Consensus 17 ~i~v~~~~Tv~~LK~~I~~~tgVp~--~rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~ 76 (360)
++++ ...||.+|.+.|....++.. ..-.+. .+|....+ .+..|++|+.|.++
T Consensus 15 ~~e~-~~~tv~~ll~~L~~~~~l~~~l~~~~va---vN~~~v~~----~~~~l~~gDeV~i~ 68 (74)
T 3rpf_C 15 NFFI-KANDLKELRAILQEKEGLKEWLGVCAIA---LNDHLIDN----LNTPLKDGDVISLL 68 (74)
T ss_dssp CEEE-ECSSHHHHHHHHHTCTTTTTTTTTCEEE---ESSSEECC----TTCCCCTTCEEEEE
T ss_pred EEee-CCCcHHHHHHHHHHCcCHHHHhhccEEE---ECCEEcCC----CCcCCCCCCEEEEE
Confidence 3666 56899999999986433221 111222 46655322 23458899999876
No 329
>2ylm_A Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70A {Homo sapiens}
Probab=26.98 E-value=1.1e+02 Score=30.62 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=39.9
Q ss_pred EEEEEECCe-----EEEEEeCCCCCHHHHHHHHHHHhCCC---ccCeeeeccccCCC---CCCCccccccc
Q psy11202 6 NLIIKWNSK-----EYKTSLSKSNTVLELKQEILKQTGVN---PERQKLLNLKHAGK---IPSDDTKLADT 65 (360)
Q Consensus 6 ~i~vk~~g~-----~~~i~v~~~~Tv~~LK~~I~~~tgVp---~~rQKLlgl~~kgk---~l~D~~~L~~~ 65 (360)
.++|.|-+. .|.+-++.+.||+||-+.+.+..+++ ..+.+|+-. +.|+ .+.++.+|+.+
T Consensus 339 ~~kv~w~~~~~~~~~~~l~vpK~gtV~Dll~~l~k~~~~~~~~~~~lRl~ev-~~~ki~ki~~~~~~i~~i 408 (530)
T 2ylm_A 339 SFKCIWLNSQFREEEITLYPDKHGCVRDLLEECKKAVELGEKASGKLRLLEI-VSYKIIGVHQEDELLECL 408 (530)
T ss_dssp CEEEEEECTTSCEEEEEECCBTTCBHHHHHHHHHTTCCCCTTCCCCEEEEEE-ETTEEEEEECTTSBGGGS
T ss_pred eEEEEEECCCCceEEEEEEcCCCCCHHHHHHHHHHhcCCCcCCcccEEEEEE-ECCEEEEecCCCcccccc
Confidence 355556332 57788999999999999999999987 344444422 3553 45566666655
No 330
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=25.73 E-value=91 Score=23.54 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=20.4
Q ss_pred EEEEEEECC--------eEEEEEeCCCCCHHHHHHHHHHHh
Q psy11202 5 LNLIIKWNS--------KEYKTSLSKSNTVLELKQEILKQT 37 (360)
Q Consensus 5 i~i~vk~~g--------~~~~i~v~~~~Tv~~LK~~I~~~t 37 (360)
|+|+|++-+ ..++++ ..||.+|.+.+....
T Consensus 4 m~v~V~~fa~lr~~~g~~~~~l~---~~tv~~ll~~L~~~~ 41 (99)
T 2l52_A 4 AEVKVKLFANLREAAGTPELPLS---GEKVIDVLLSLTDKY 41 (99)
T ss_dssp CEEEEEECTHHHHHHSSSEEEEE---CSSHHHHHHHHHHHC
T ss_pred eEEEEEEeHHHHHHhCCCeEEEe---CCcHHHHHHHHHHHC
Confidence 567777532 234444 589999999998774
No 331
>2npt_B Mitogen-activated protein kinase kinase kinase 2; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2
Probab=24.13 E-value=2e+02 Score=22.08 Aligned_cols=37 Identities=5% Similarity=0.125 Sum_probs=33.1
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCC
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVN 40 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp 40 (360)
.++|+.-|.|++..|.++-.-...+|.+++...+|-+
T Consensus 20 dvRIKfE~~gEkRIi~f~RPv~f~el~~kv~~afGq~ 56 (100)
T 2npt_B 20 DVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQS 56 (100)
T ss_dssp CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred ceEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCe
Confidence 4778888999999999999999999999999999833
No 332
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=23.75 E-value=26 Score=27.13 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=38.7
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHhCCC---cc--------CeeeeccccCC-CCCCC------ccccccccCCCCCEEEEE
Q psy11202 15 EYKTSLSKSNTVLELKQEILKQTGVN---PE--------RQKLLNLKHAG-KIPSD------DTKLADTNATDGFKLMVM 76 (360)
Q Consensus 15 ~~~i~v~~~~Tv~~LK~~I~~~tgVp---~~--------rQKLlgl~~kg-k~l~D------~~~L~~~~l~~g~~i~l~ 76 (360)
...|+++++.|+.+|-+.|.+.-... |+ ...|. ..+ ..+.. +.+|.++|+.+|+.|++.
T Consensus 6 ~~~l~v~~~~TL~~lid~L~~~p~~qlk~PSltt~~~~~~k~LY---mq~pp~Lee~Tr~NL~k~l~eLgl~~g~ei~Vt 82 (98)
T 1y8x_B 6 PQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLY---MQSVTSIEERTRPNLSKTLKELGLVDGQELAVA 82 (98)
T ss_dssp CCCEECCTTCBHHHHHHHHHHCTTCCCSSCEEEEEETTEEEEEE---CSSCHHHHHHHHHHHHSBSGGGTCCTTCEEEEE
T ss_pred cEEEEECCchhHHHHHHHHHhChHhhccCCeeeeecCCCCCeEE---EeCcHHHHHHhHhhhhCCHHHhCCCCCCEEEEE
Confidence 45689999999999999998843221 11 33343 232 11222 256889999999998874
No 333
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=23.54 E-value=1.1e+02 Score=22.82 Aligned_cols=26 Identities=19% Similarity=0.276 Sum_probs=21.1
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHH
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLEL 29 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~L 29 (360)
+.+|++...++..++++++..|+.+.
T Consensus 2 ~~~v~~~~~~~~~~~~~~~g~tlL~a 27 (98)
T 1iue_A 2 FYNITLRTNDGEKKIECNEDEYILDA 27 (98)
T ss_dssp EEEEEEEETTEEEEEEEETTSCHHHH
T ss_pred cEEEEEEeCCCeEEEEeCCCCcHHHH
Confidence 46788887777788999999999874
No 334
>3kuz_A Plexin-C1; structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=21.98 E-value=3.1e+02 Score=22.02 Aligned_cols=72 Identities=17% Similarity=0.302 Sum_probs=43.3
Q ss_pred eEEEEEEE---C-------CeEEEEEeCCCCCHHHHHHHHHHH----hCCCccCeee--ecccc-CC---CCCC------
Q psy11202 4 SLNLIIKW---N-------SKEYKTSLSKSNTVLELKQEILKQ----TGVNPERQKL--LNLKH-AG---KIPS------ 57 (360)
Q Consensus 4 ~i~i~vk~---~-------g~~~~i~v~~~~Tv~~LK~~I~~~----tgVp~~rQKL--lgl~~-kg---k~l~------ 57 (360)
+++++|-. . ...++|.|-..+||.++|++|-.. .|+|-. |+. +.|.| .| .+|.
T Consensus 19 tLtL~vv~~~~~~~~~~~~~~~v~VkVLdCDTItQVKEKILdavYk~k~~pys-~r~~d~dLEwr~g~~~~~L~D~D~tS 97 (126)
T 3kuz_A 19 TVALNVVFEKIPENESADVCRNISVNVLDCDTIGQAKEKIFQAFLSKNGSPYG-LQLNEIGLELQMGTRQKELLDIDSSS 97 (126)
T ss_dssp EEEEEEEECCCTTSSCSCSCCEEEEEEETTCBHHHHHHHHHHHHHHHHSSCCS-SCGGGEEEEEEETTEEEEECSSCTTC
T ss_pred EEEEEEEeeccCCCcCcCcCCceEeeeecCCcHHHHHHHHHHHHhccCCCcCC-CCccccceEEecCCCcceeeccCCcc
Confidence 36777776 2 246788887889999999998654 266553 111 00001 11 1111
Q ss_pred ----Cc----cccccccCCCCCEEEEE
Q psy11202 58 ----DD----TKLADTNATDGFKLMVM 76 (360)
Q Consensus 58 ----D~----~~L~~~~l~~g~~i~l~ 76 (360)
+. .+|+-|++.+|+++-|+
T Consensus 98 ~~~e~~wkrLNTL~HY~V~Dgatlal~ 124 (126)
T 3kuz_A 98 VILEDGITKLNTIGHYEISNGSTIKVF 124 (126)
T ss_dssp CBCTTSCBCCCBTGGGTCCTTCEEEEE
T ss_pred eEecCCeeEeccccccCCCCCCEEEEe
Confidence 11 36677889999998765
No 335
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=21.54 E-value=1.1e+02 Score=30.89 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=37.1
Q ss_pred CCceEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccc
Q psy11202 1 MGDSLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLK 50 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~ 50 (360)
|.-.|.+.|..-+.++.|.+++++|+.+|=..|....|+.-. ...||.
T Consensus 1 ~~k~i~v~V~llDgt~e~~vd~~tt~~ell~~V~~~LgL~e~--~~FGL~ 48 (575)
T 2i1j_A 1 MPKSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV--WFFGLQ 48 (575)
T ss_dssp --CEEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCCG--GGEEEE
T ss_pred CCceEEEEEEeCCCeEEEEECCCCCHHHHHHHHHHHcCCCCc--cceeEE
Confidence 555688899875558899999999999999999999998642 334543
No 336
>3ge3_C Toluene-4-monooxygenase system protein B; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: d.15.12.0 PDB: 3dhh_C* 3dhg_C* 3dhi_C 3ge8_C 3i5j_C 3i63_C 3q14_C 3q2a_C* 3q3m_C* 3q3n_C* 3q3o_C* 3rmk_C* 3ri7_C*
Probab=21.49 E-value=2.6e+02 Score=20.87 Aligned_cols=74 Identities=8% Similarity=0.173 Sum_probs=51.8
Q ss_pred CCceEEEEEEECCeEE--EEEeCCCCCHHHHHHHHHHHh-C--CCccCeeeeccccCCCC--CCCccccccccCCCCCEE
Q psy11202 1 MGDSLNLIIKWNSKEY--KTSLSKSNTVLELKQEILKQT-G--VNPERQKLLNLKHAGKI--PSDDTKLADTNATDGFKL 73 (360)
Q Consensus 1 m~~~i~i~vk~~g~~~--~i~v~~~~Tv~~LK~~I~~~t-g--Vp~~rQKLlgl~~kgk~--l~D~~~L~~~~l~~g~~i 73 (360)
|+ .+-|+..+.|.-. -|.|+++.|..++-++++.-. | |.|.-= .+.....|.. +..+.++++.||++=+.|
T Consensus 1 Ma-~~Pl~~~F~gDFv~~Lv~VDt~dtmdqVA~k~A~h~VGrrv~p~pg-~lrVr~~G~~~~~Pr~mtVaeaGl~Pme~v 78 (84)
T 3ge3_C 1 MS-AFPVHAAFEKDFLVQLVVVDLNDSMDQVAEKVAYHCVNRRVAPREG-VMRVRKHRSTELFPRDMTIAESGLNPTEVI 78 (84)
T ss_dssp -C-EEEEEEEETTCSBEEEEEEETTCBHHHHHHHHHHTTBTTTBCCCSS-CEEEEETTCSCBCCTTCBHHHHCCCTTCEE
T ss_pred Cc-ccceEEEeccccEEEEEEecCCCcHHHHHHHHhhhhcceeeCCCCC-cEEEEECCCcccCCCCCEeeccCCCcceEE
Confidence 54 6888888888743 367999999999998887653 4 333321 3323357766 888999999999998777
Q ss_pred EEE
Q psy11202 74 MVM 76 (360)
Q Consensus 74 ~l~ 76 (360)
-++
T Consensus 79 ev~ 81 (84)
T 3ge3_C 79 DVV 81 (84)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 337
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=21.46 E-value=1.3e+02 Score=27.41 Aligned_cols=65 Identities=12% Similarity=0.098 Sum_probs=43.4
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCCccCeeeeccccC--C--CCCCCccccccccCCCC
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVNPERQKLLNLKHA--G--KIPSDDTKLADTNATDG 70 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp~~rQKLlgl~~k--g--k~l~D~~~L~~~~l~~g 70 (360)
.+.++|..-+.++.+.+++++|+.+|=+.|....|+.- ....||.+. | ..++.+..+.+.+.+.+
T Consensus 22 ~~~~~V~lldg~~~~~v~~~t~~~el~~~v~~~l~L~e--~~~FgL~~~~~~~~~wL~~~~~i~~q~~~~~ 90 (314)
T 1h4r_A 22 TFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRE--TWFFGLQYTIKDTVAWLKMDKKVLDHDVSKE 90 (314)
T ss_dssp EEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCC--GGGEEEEEEETTEEEECCTTSBGGGSSCCCS
T ss_pred eeEEEEEeCCceEEEEeCCCCcHHHHHHHHHHHhCCCC--CccceEEEEeCCcCeeCCCccCHHHcCCCCC
Confidence 47788886444889999999999999999999999864 234455332 2 12344445555444333
No 338
>1ibx_B Chimera of IGG binding protein G and DNA fragmentation factor 45; DFF40, DFF45, protein-protein complex, CIDE, CIDE domain complex; HET: DNA; NMR {Streptococcus SP} SCOP: d.15.2.1
Probab=21.16 E-value=1.3e+02 Score=24.77 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHhCCCcc--CeeeeccccCCCCCCCccccccccCCCCCEEEEEccCcc
Q psy11202 24 NTVLELKQEILKQTGVNPE--RQKLLNLKHAGKIPSDDTKLADTNATDGFKLMVMGSLEQ 81 (360)
Q Consensus 24 ~Tv~~LK~~I~~~tgVp~~--rQKLlgl~~kgk~l~D~~~L~~~~l~~g~~i~l~gs~~~ 81 (360)
.++.+|+.+.....+++.. --.|. |...|..+.|+.-+..+ .++..+|++...+.
T Consensus 82 ~SL~EL~~K~~~kL~l~~~~~~~~Lv-LeeDGTeVddEeYF~tL--p~nT~LmvL~~gek 138 (145)
T 1ibx_B 82 SCLEDLRSKACDILAIDKSLTPVTLV-LAEDGTIVDDDDYFLCL--PSNTKFVALASNEK 138 (145)
T ss_dssp SSHHHHHHHHHHHHTCSCTTSCCEEE-ETTTCCBCSSHHHHHHS--CSSCBEEEECSSCC
T ss_pred CCHHHHHHHHHHHhcCCCCccccEEE-EeeCCcEEechhHhhcC--CCCCEEEEECCCCc
Confidence 5899999999999999763 44544 43578888888777766 47888888865554
No 339
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=20.79 E-value=1.7e+02 Score=29.94 Aligned_cols=62 Identities=5% Similarity=0.031 Sum_probs=50.3
Q ss_pred CCCceEEeecccceeecCCCcccceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHhCCC
Q psy11202 136 PGKKLLVLDIDYTLFDHRSAAEQGYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLLGVT 201 (360)
Q Consensus 136 ~~kk~LVLDLD~TLv~~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L~~~ 201 (360)
.+..++.+..|++++-.- ...-..||+..+.++.|.+ ++++++-|.-....+..+.+.+|+.
T Consensus 435 ~g~~~l~va~~~~~~G~i----~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 497 (645)
T 3j08_A 435 EAKTAVIVARNGRVEGII----AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 497 (645)
T ss_dssp TTCCCEEEEETTEEEEEE----EEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred cCCeEEEEEECCEEEEEE----EecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 356677777787777431 1234579999999999987 8999999999999999999999874
No 340
>2c60_A Human mitogen-activated protein kinase kinase kinase 3 isoform 2; MAP3K3, MAP/ERK kinase kinase 3, MAPKKK3, MEKK3, serine threonine phosphorylation; HET: MSE; 1.25A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_B
Probab=20.74 E-value=2.8e+02 Score=21.59 Aligned_cols=37 Identities=8% Similarity=0.172 Sum_probs=33.3
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHHHHHHHHHhCCC
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLELKQEILKQTGVN 40 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~LK~~I~~~tgVp 40 (360)
.++|+.-+.|++..|.++-.-...+|.+++...+|-+
T Consensus 31 dvRIKfE~~gEKRIiqf~RPvkf~dl~qkv~~afGq~ 67 (111)
T 2c60_A 31 DVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQP 67 (111)
T ss_dssp CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHSSC
T ss_pred ceEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCe
Confidence 4778888999999999999999999999999999844
No 341
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=20.18 E-value=1.4e+02 Score=22.12 Aligned_cols=26 Identities=4% Similarity=0.049 Sum_probs=20.4
Q ss_pred eEEEEEEECCeEEEEEeCCCCCHHHH
Q psy11202 4 SLNLIIKWNSKEYKTSLSKSNTVLEL 29 (360)
Q Consensus 4 ~i~i~vk~~g~~~~i~v~~~~Tv~~L 29 (360)
+.+|++...++.+++++++..|+.+.
T Consensus 2 ~~~v~~~~~~~~~~~~~~~g~tlL~a 27 (97)
T 1a70_A 2 AYKVTLVTPTGNVEFQCPDDVYILDA 27 (97)
T ss_dssp EEEEEEEETTEEEEEEEETTSCHHHH
T ss_pred eEEEEEEeCCceEEEEeCCCCcHHHH
Confidence 46777776666788999999999875
No 342
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=20.02 E-value=99 Score=31.30 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=37.3
Q ss_pred ceeecCccHHHHHHHHhc-CCeEEEEcCCcHHHHHHHHHHh-CC
Q psy11202 159 GYELMRPYLHEFLTSAYK-NYDIAIWSATGMKWIEEKMKLL-GV 200 (360)
Q Consensus 159 ~~~~~RP~l~eFL~~l~~-~yeivIwTas~~~ya~~il~~L-~~ 200 (360)
.++.+-|.+..+|..+.+ + .+.|-|.+.+.|++.+|+.+ |.
T Consensus 243 kYv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 243 KYVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp HHBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred HhcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 477788999999999987 7 99999999999999999999 63
Done!