BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11203
(438 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q33DR3|DLP1_MOUSE Decaprenyl-diphosphate synthase subunit 2 OS=Mus musculus GN=Pdss2
PE=1 SV=2
Length = 401
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/373 (42%), Positives = 231/373 (61%), Gaps = 28/373 (7%)
Query: 66 WNRAVSEAEKIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNN 125
WN+ VSEAEKIVGYP SF+SLR LLSDE++N+A+ +RKLVG+ HPLL TA++L+++ R+N
Sbjct: 50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHN 109
Query: 126 MQAWGLIVLLISKAAG--HLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNI 183
+Q GL+VLLISKAAG N D +GV QR+LAE+TE+I T+ LVH+GIVN+
Sbjct: 110 LQLRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNL 169
Query: 184 TPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEF 243
+ L S L DM FGNKIA+LSGD+LL+N+C+ LA L+N +VEL+S A+ DL +
Sbjct: 170 SE-LQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVY 228
Query: 244 LGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSC 303
Q N + + PDD ++ W + LS +LL KSC
Sbjct: 229 ------QENSASTK---ENSIPDD--------------IGISTWKEQTFLSHCALLAKSC 265
Query: 304 KGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSNYAPGT-IFNLTSAPVMFHLE 362
+ ++LA DA +Q+ +Q+GKH+A++ + DL+PF + A + FNL SAPV+ H E
Sbjct: 266 QAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKASDSKTFNLNSAPVVLHQE 325
Query: 363 QEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKES 422
D + +I + E +++Y K+ + G G+ L + H +A++ L+ F S
Sbjct: 326 FLGRDLWIKQIGEAQEK-GSLNYSKLRETIKAGKGVTSAIDLCRYHGNKALEALESFPPS 384
Query: 423 DARTALSNIIVAM 435
+AR+AL NI+ A+
Sbjct: 385 EARSALENIVFAV 397
>sp|Q5U2R1|DLP1_RAT Decaprenyl-diphosphate synthase subunit 2 OS=Rattus norvegicus
GN=Pdss2 PE=2 SV=1
Length = 401
Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 228/374 (60%), Gaps = 30/374 (8%)
Query: 66 WNRAVSEAEKIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNN 125
WN+ VSEAEKIVGYP SF+SLR LLSDE++NVA+ +RKLVG+ HPLL TA+ +++ R+N
Sbjct: 50 WNQVVSEAEKIVGYPASFMSLRCLLSDELSNVAMQVRKLVGTQHPLLTTARGFVHDSRHN 109
Query: 126 MQAWGLIVLLISKAAG--HLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNI 183
+Q GL+VLLISKAAG N D +G+ QR LAE+TE+I T+ LVH+GIVN+
Sbjct: 110 LQLRGLVVLLISKAAGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNL 169
Query: 184 TPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEF 243
+ L S L DM FGNKIA+LSGD+LL+N+C+ LA L+N +VEL++ A+ DL + +
Sbjct: 170 SE-LQSSDGPLKDMKFGNKIAVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIY 228
Query: 244 L-GRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKS 302
Q NP+ PDD ++ W + LS +LL KS
Sbjct: 229 QENSASTQGNPI----------PDDIR--------------ISTWKEQTFLSHCALLAKS 264
Query: 303 CKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSNYAPGT-IFNLTSAPVMFHL 361
CK ++LA DA +Q+ +Q+GKH+A++ + DL+PF + A + FNL SAPV+ H
Sbjct: 265 CKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDKASDSKTFNLNSAPVVLHQ 324
Query: 362 EQEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKE 421
E D + +I + E ++Y K+ + G G+ L + H +A++ L+ F
Sbjct: 325 EFLGRDLWIKQIGEAQEK-GRLNYTKLRETIKAGKGVTSAIDLCRYHGNKALEALESFPP 383
Query: 422 SDARTALSNIIVAM 435
S+AR+AL NI+ A+
Sbjct: 384 SEARSALENIVFAV 397
>sp|Q86YH6|DLP1_HUMAN Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens GN=PDSS2
PE=1 SV=2
Length = 399
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 230/373 (61%), Gaps = 29/373 (7%)
Query: 66 WNRAVSEAEKIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNN 125
WN+ VSEAEKIVGYPTSF+SLR LLSDE++N+A+ +RKLVG+ HPLL TA+ L+++ N+
Sbjct: 49 WNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNS 108
Query: 126 MQAWGLIVLLISKAAG--HLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNI 183
+Q GL+VLLISKAAG +N D +G+ QR+LAE+TE+I + LVH+GIVN+
Sbjct: 109 LQLRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNL 168
Query: 184 TPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEF 243
L S L DM FGNKIA+LSGD+LL+N+C+ LA L+N +VEL++ A+ DL + +
Sbjct: 169 NE-LQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVY 227
Query: 244 LGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSC 303
+N+ ++T DD ++ W + LS G+LL KSC
Sbjct: 228 -----HENSTSKESYIT-----DD--------------IGISTWKEQTFLSHGALLAKSC 263
Query: 304 KGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSNYAPGTI-FNLTSAPVMFHLE 362
+ ++LA DAE+Q +Q+GKH+A++ + D++PF ++ FNL SAPV+ H E
Sbjct: 264 QAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTSDSMTFNLNSAPVVLHQE 323
Query: 363 QEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKES 422
D + +I + E +DY K+ + G G+ L + H +A++ L+ F S
Sbjct: 324 FLGRDLWIKQIGEAQEK-GRLDYAKLRERIKAGKGVTSAIDLCRYHGNKALEALESFPPS 382
Query: 423 DARTALSNIIVAM 435
+AR+AL NI+ A+
Sbjct: 383 EARSALENIVFAV 395
>sp|Q6CBH3|COQ1_YARLI Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COQ1
PE=3 SV=1
Length = 452
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 201/465 (43%), Gaps = 96/465 (20%)
Query: 29 ALCRSSSSAVSTTTESSSAAKFTPTHTVPSSNTNRPDWNRAVSEAEKIVGYPTSFLSLRW 88
A R S+ E++ K TP + P+W+ AV +A ++V T
Sbjct: 21 AGARPKSTLTEAVLETTGLLKTTPQN---------PEWSGAVKQASRLVETDTPIRDPFS 71
Query: 89 LLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKA--------- 139
++S E++ +A ++ L+GS HP L + + LIVLL+S+A
Sbjct: 72 IVSQEMSTLANNIGSLIGSGHPTLNKVATYYFQSEGK-HVRPLIVLLLSRALSAIPESER 130
Query: 140 -------------AGHLNVDEMEED-----------------------------KAAGVL 157
G LN + D ++ G+L
Sbjct: 131 DRGTFDASDVTENVGELNPEPSINDPLSPIEILHGINPDIVLNPLSRPSDPLPYESNGIL 190
Query: 158 HSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCS 217
QR LAE+ EMI T+ L+H +++ + P ++ FGNK+A+L+GD+LL +
Sbjct: 191 PKQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPT--GNVAFGNKMAILAGDFLLGRASV 248
Query: 218 ELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDE 277
+A LRN ++EL+S + +L E EF+ L+N T D+S E
Sbjct: 249 AIARLRNAEVIELLSTTIANLVEGEFM---QLKN-----------TIVDNS--------E 286
Query: 278 LPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDL 337
+ + + L SL+ KSC+ L+G + + Y+FGK+L L +Q D+
Sbjct: 287 IANKATFEYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDM 346
Query: 338 EPFTSNYA----PGTI---FNLTSAPVMFHLEQEKSDELLNEINKGTESVTNIDYKKVYN 390
++ + P L +APV+F EK EL + I + + +++ +
Sbjct: 347 LDYSEGESHLGKPAGADLKLGLATAPVLF--AWEKYPELGDMIKRKFDGPGDVERARF-- 402
Query: 391 IVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNIIVAM 435
+V + G+ T++L +++ +A+ L + S++R AL N+ + M
Sbjct: 403 LVQQADGLSRTRELAQKYCDEAVANLDLLPYSESREALRNLTMKM 447
>sp|Q7S565|COQ1_NEUCR Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU02305 PE=3 SV=1
Length = 449
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 185/408 (45%), Gaps = 71/408 (17%)
Query: 67 NRAVSEAEKIV-GYPTSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNN 125
N AV++A K G PT LR L++ E+ + ++RKL+GS HP L A Y
Sbjct: 65 NNAVTKAIKGTDGLPT-IDPLR-LVAGEMKFLTGNIRKLLGSGHPSLDRAAKY-YTQAEG 121
Query: 126 MQAWGLIVLLISKAAG------------------------HLNV--DEMEEDKA------ 153
LIVLL+S+A LN+ D D
Sbjct: 122 KHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPA 181
Query: 154 -AGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLL 212
+L SQR LAE+TE+I T+ L+H +++ + P ++ FGNK+A+L+GD+LL
Sbjct: 182 DTDILPSQRRLAEITELIHTASLLHDDVIDHSESRRGAPSA--NLEFGNKMAVLAGDFLL 239
Query: 213 SNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIM 272
+ LA LR+ +VEL++ + +L E EF+ L+N T+ D+ N
Sbjct: 240 GRASVALARLRHAEVVELLATVIANLVEGEFM---QLKN-----------TARDEKNPKW 285
Query: 273 ESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQ 332
L + + L SL+ KSC+ + L G DA + Y +GK+L LA+Q
Sbjct: 286 SE-------ETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQ 338
Query: 333 ACLDLEPFTSNY----APGTI---FNLTSAPVMFHLEQEKSDELLNEINKGTESVTNIDY 385
D+ +T + P L +AP++F + EL + + E D
Sbjct: 339 LVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKT--MPELGPLVGRKFEK--EGDA 394
Query: 386 KKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNIIV 433
+ +V + G+ T+ L + ++++A++ + F +S+A+ L + V
Sbjct: 395 ARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAKDGLIEMAV 442
>sp|P72580|PREA_SYNY3 Prenyl transferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=preA PE=3 SV=2
Length = 323
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 159/344 (46%), Gaps = 60/344 (17%)
Query: 100 HLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEMEEDKAAGVLHS 159
+L++LVG+ HP+L A L+ + IVLL+S+A ++++ A
Sbjct: 21 NLKRLVGARHPILGAAAEHLFEA-GGKRVRPAIVLLVSRAT------LLDQELTA----R 69
Query: 160 QRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSEL 219
R LAE+TEMI T+ LVH +V+ + P V + F N++A+L+GD+L + S L
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDEADLRRNVPTV--NSLFDNRVAVLAGDFLFAQSSWYL 127
Query: 220 AALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELP 279
A L N +V+L+S +RD E E I++S++
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGE----------------------------ILQSINRFD 159
Query: 280 MTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEP 339
L + ++ SL+ S K L+ ++ + Y++GKHL LA+Q D+
Sbjct: 160 TDTDLETYLEKSYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILD 219
Query: 340 FT-----------SNYAPGTIFNLTSAPVMFHLEQEKSDELLNEINKGTESVTNIDYKKV 388
FT S+ G I +AP +F +E+ LL ++ + E D ++
Sbjct: 220 FTSPTEVLGKPAGSDLISGNI----TAPALFAMEKYP---LLGKLIE-REFAQAGDLEQA 271
Query: 389 YNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNII 432
+V +G G+R +++L +Q A + L V + S R +L ++
Sbjct: 272 LELVEQGDGIRRSRELAANQAQLARQHLSVLEMSAPRESLLELV 315
>sp|Q653T6|SPS1_ORYSJ Solanesyl-diphosphate synthase 1, mitochondrial OS=Oryza sativa
subsp. japonica GN=SPS1 PE=1 SV=1
Length = 430
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 52/357 (14%)
Query: 89 LLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEM 148
L++DE++ +A LR +V + P L +A + + + VLL+ +A + +
Sbjct: 95 LVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDS 154
Query: 149 EEDKAAGVLHS-----QRALAEVTEMIRTSHLVHKGIVN---ITPGLYSEPVVLNDMTFG 200
E +L + Q+ +AE+TEMI + L+H +++ G+ S ++ G
Sbjct: 155 TEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIM-----G 209
Query: 201 NKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLT 260
NK+++L+GD+LLS +C LAAL N +V LM+ AV L E T
Sbjct: 210 NKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGE-----------------T 252
Query: 261 TKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQG 320
+ S S + S+D + + SL+ SCK LAG A++
Sbjct: 253 MQIST--SREQRRSMDY---------YLQKTYYKTASLISNSCKAVAILAGHTADVSMLA 301
Query: 321 YQFGKHLALAWQACLDLEPFTSNYA---PGTIFN----LTSAPVMFHLEQEKSDELLNEI 373
Y++G++L LA+Q D+ FT A G++ + + +AP+++ +E+ +L +
Sbjct: 302 YEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAMEEFP--QLHEVV 359
Query: 374 NKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSN 430
++G ++ N++ Y + K G+ TK+L ++H+ +A+K ++ +SD L++
Sbjct: 360 DRGFDNPANVELALDY--LQKSRGIEKTKELAREHANRAIKAIEALPDSDDEDVLTS 414
>sp|P18900|COQ1_YEAST Hexaprenyl pyrophosphate synthase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COQ1 PE=1
SV=1
Length = 473
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 38/306 (12%)
Query: 151 DKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDY 210
DK G+L QR LAE+ EMI T+ L+H +++ + P + F NK+A+L+GD+
Sbjct: 166 DKQRGILPKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPS--GNAAFTNKMAVLAGDF 223
Query: 211 LLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRD---------LQNN----PLPPQ 257
LL + ++ L N +VELMS ++ +L E EF+ ++ ++N P+P +
Sbjct: 224 LLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSK 283
Query: 258 FLTTKTS----PDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQD 313
L K P + S D++ T A + + L +L+ KSC+ L+G
Sbjct: 284 KLEVKEHDFRVPSRQQGLQLSHDQIIET-AFEYYIHKTYLKTAALISKSCRCAAILSGAS 342
Query: 314 AELQEQGYQFGKHLALAWQACLDLEPFTSN-------YAPGTIFNLTSAPVMFHLEQEKS 366
+ ++ Y FG++L + +Q D+ FT + + +APV+F +++ S
Sbjct: 343 PAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPS 402
Query: 367 DELL---NEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQ-VFKES 422
L N +G T ID +++N ++K TK L +++ +A++ L+ ES
Sbjct: 403 LGPLISRNFSERGDVEKT-IDSVRLHNGIAK------TKILAEEYRDKALQNLRDSLPES 455
Query: 423 DARTAL 428
DAR+AL
Sbjct: 456 DARSAL 461
>sp|Q75HZ9|SPS2_ORYSJ Solanesyl-diphosphate synthase 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=SPS2 PE=1 SV=2
Length = 403
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 69/382 (18%)
Query: 69 AVSEAEKIVGYP--TSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNM 126
A+S A P S SL ++SD++ + +L+ LVG+ +P+L +A ++ G
Sbjct: 65 AISSARTTTMIPERISVSSLLEVVSDDLLKLNNNLKSLVGAENPVLVSAAEQIF-GAGGK 123
Query: 127 QAWGLIVLLISKAAGHLNVDEMEEDKAAGVLH---SQRALAEVTEMIRTSHLVHKGIVNI 183
+ +V L+S+A L AG+L + LAE+ EMI T+ L+H +++
Sbjct: 124 RLRPALVFLVSRATAEL----------AGLLELTTEHQRLAEIIEMIHTASLIHDDVID- 172
Query: 184 TPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEF 243
G+ ++ + +G ++A+L+GD++ + S LA L N +++L+S ++D
Sbjct: 173 DSGMRRGKETIHQL-YGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFA---- 227
Query: 244 LGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSC 303
S +I ++ L D+ ++ SLL S
Sbjct: 228 ------------------------SGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASST 263
Query: 304 KGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFT-----------SNYAPGTIFNL 352
+ +G + EQ Y++G++L L++Q D+ FT S+ A G NL
Sbjct: 264 RSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKG---NL 320
Query: 353 TSAPVMFHLEQE-KSDELLN-EINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQ 410
T APV+F L+ E K E+++ E ++ T ID +V + G+R ++L K+
Sbjct: 321 T-APVIFALQDEPKLREIIDSEFSESDSLATAID------LVHRSGGIRRAQELAKEKGD 373
Query: 411 QAMKVLQVFKESDARTALSNII 432
A++ LQ +S R+ L N++
Sbjct: 374 LALQNLQCLPKSQFRSTLENVV 395
>sp|Q5HZ00|SPS3_ARATH Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=SPS3 PE=1 SV=1
Length = 422
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 166/351 (47%), Gaps = 54/351 (15%)
Query: 89 LLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEM 148
L++DE++ ++ LR++V + P L +A + + + +LL+ A ++ V E
Sbjct: 87 LVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEA 146
Query: 149 EEDKAAGVLHS-----QRALAEVTEMIRTSHLVHKGIVN---ITPGLYSEPVVLNDMTFG 200
++ ++ S QR +AE+TEMI + L+H +++ G+ S VV+ G
Sbjct: 147 LIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVM-----G 201
Query: 201 NKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLT 260
NK+++L+GD+LLS +C LAAL+N +V L++ AV L E
Sbjct: 202 NKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGE------------------ 243
Query: 261 TKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQG 320
ME ++ + + SL+ SCK L GQ AE+
Sbjct: 244 ----------TMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLA 293
Query: 321 YQFGKHLALAWQACLDLEPFTSNYA---PGTIFNL----TSAPVMFHLEQ-EKSDELLNE 372
+++G++L LA+Q D+ FT A G++ ++ +AP++F +E+ + E++++
Sbjct: 294 FEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQLREVVDQ 353
Query: 373 INKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESD 423
+ K N+D Y + K G++ ++L +H+ A + E+D
Sbjct: 354 VEKDPR---NVDIALEY--LGKSKGIQRARELAMEHANLAAAAIGSLPETD 399
>sp|Q8S948|SPS1_ARATH Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1
PE=1 SV=1
Length = 406
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 171/366 (46%), Gaps = 59/366 (16%)
Query: 80 PTSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKA 139
P S ++L L++ ++ + +L +VG+ +P+L +A ++ GL V L+S A
Sbjct: 81 PISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGL-VFLVSHA 139
Query: 140 AGHL-NVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMT 198
L + E+ + R LAE+ EMI T+ L+H +++ + + V
Sbjct: 140 TAELAGLKELTTE--------HRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHE--L 189
Query: 199 FGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQF 258
FG ++A+L+GD++ + + LA L N +++L+S ++D
Sbjct: 190 FGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFA------------------- 230
Query: 259 LTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQE 318
S +I ++ L ++ ++ SL+ S KG + + ++ E
Sbjct: 231 ---------SGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTE 281
Query: 319 QGYQFGKHLALAWQACLDLEPFT-----------SNYAPGTIFNLTSAPVMFHLEQEKSD 367
Q Y+FGK+L L++Q D+ FT S+ A G NLT APV+F LE+E
Sbjct: 282 QMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKG---NLT-APVIFALEREPR- 336
Query: 368 ELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTA 427
L EI + +E ++ V+KG G++ ++L ++ + A+K LQ S R+A
Sbjct: 337 --LREIIE-SEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRSGFRSA 393
Query: 428 LSNIIV 433
L ++++
Sbjct: 394 LEDMVL 399
>sp|P31171|PREA_CYAPA Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1
Length = 323
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 159/343 (46%), Gaps = 60/343 (17%)
Query: 100 HLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEMEEDKAAGVLHS 159
+L+KLVGS HP+L A L++ + + IVLLISKA ME + +
Sbjct: 21 NLKKLVGSGHPILSAASEHLFSA-SGKRPRPAIVLLISKAT-------MENEI---ITSR 69
Query: 160 QRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSEL 219
R LAE+TE+I T+ LVH I++ + P V +D FG KIA+L+GD+L + S L
Sbjct: 70 HRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSD--FGTKIAILAGDFLFAQSSWYL 127
Query: 220 AALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELP 279
A L + +V+L+S + D E E I L++
Sbjct: 128 ANLESLEVVKLISKVITDFAEGE----------------------------IRRGLNQFK 159
Query: 280 MTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEP 339
+ L ++ ++ SLL S K L+ D + Y +G+HL LA+Q D+
Sbjct: 160 VDLTLEEYLEKSFYKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILD 219
Query: 340 FT-----------SNYAPGTIFNLTSAPVMFHLEQEKSDELLNEINKGTESVTNIDYKKV 388
FT S+ G NLT APV+F LEQ + EL+ I + + +Y
Sbjct: 220 FTSSTEELGKPSCSDLKKG---NLT-APVLFALEQ--NSELIPLIQRQFSEPKDFEY--T 271
Query: 389 YNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNI 431
IV + + T++L +H+Q A++ L+ S ++ AL I
Sbjct: 272 LQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALKLI 314
>sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment)
OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1
Length = 372
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 184/410 (44%), Gaps = 74/410 (18%)
Query: 37 AVSTTTESSSAAKFTPTHTVPSSNTNRPDWNRAVSEAEKIVGYPTSFLSLRWLLSDEIAN 96
+V + ++ AA P T+P + V AE+I S SL +++D++
Sbjct: 15 SVVSPSKPGVAAVDVPAATIPDAAAT------GVGVAERI-----SVSSLLEVVADDLLK 63
Query: 97 VALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEMEEDKAAGV 156
+ +L+ LVG+ +P+L +A ++ G + +V L+S+A L AG+
Sbjct: 64 LNNNLKSLVGAENPVLVSAAEQIF-GAGGKRLRPALVFLVSRATAEL----------AGL 112
Query: 157 LH---SQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLS 213
L + LAE+ EMI T+ L+H +++ G+ ++ + +G ++A+L+GD++ +
Sbjct: 113 LELTTEHQRLAEIIEMIHTASLIHDDVID-DSGMRRGKETIHQL-YGTRVAVLAGDFMFA 170
Query: 214 NSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIME 273
S LA L N +++L+S ++D S +I +
Sbjct: 171 QSSWFLANLENIEVIKLISQVIKDFA----------------------------SGEIKQ 202
Query: 274 SLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQA 333
+ L D+ ++ SL+ S + +G + EQ Y++G++L L++Q
Sbjct: 203 ASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQV 262
Query: 334 CLDLEPFT-----------SNYAPGTIFNLTSAPVMFHLEQEKSDELLNEINKGTESVTN 382
D+ FT S+ A G NLT APV+F L+ E L EI S TN
Sbjct: 263 VDDILDFTQSAEQLGKPAGSDLAKG---NLT-APVIFALQDEPQ---LREIIDSEFSETN 315
Query: 383 IDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNII 432
+V + G++ +L ++ + A++ LQ S+ R+ L N++
Sbjct: 316 -SLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCLPRSEFRSTLENMV 364
>sp|Q76FS5|SPS2_ARATH Solanesyl diphosphate synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=SPS2 PE=1 SV=1
Length = 417
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 168/365 (46%), Gaps = 57/365 (15%)
Query: 80 PTSFLSLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKA 139
P S +L +++D++ + +L +VG+ +P+L +A +++ GL V L+S+A
Sbjct: 92 PISLETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGL-VFLVSRA 150
Query: 140 AGHLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTF 199
E+ K V H R L E+ EMI T+ L+H +++ + V F
Sbjct: 151 TA-----ELAGLKELTVEH--RRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHE--LF 201
Query: 200 GNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFL 259
G ++A+L+GD++ + + LA L N +++L+S ++D
Sbjct: 202 GTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFA-------------------- 241
Query: 260 TTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQ 319
S +I ++ L D+ ++ SL+ S KG + ++++ EQ
Sbjct: 242 --------SGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQ 293
Query: 320 GYQFGKHLALAWQACLDLEPFT-----------SNYAPGTIFNLTSAPVMFHLEQEKSDE 368
YQFGK+L L++Q D+ FT ++ A G I +APV+F LE E
Sbjct: 294 MYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI----TAPVIFALENEPR-- 347
Query: 369 LLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTAL 428
L EI + +E ++ IV G++ ++L K+ ++ A+K L S R+AL
Sbjct: 348 -LREIIE-SEFCEPGSLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRSGFRSAL 405
Query: 429 SNIIV 433
++++
Sbjct: 406 EDMVM 410
>sp|P51268|PREA_PORPU Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1
Length = 323
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 160/360 (44%), Gaps = 64/360 (17%)
Query: 85 SLRWLLSDEIANVALHLRKLVGSNHPLL-KTAKSLLYNGRNNMQAWGLIVLLISKAAGHL 143
SL + E+ +V +L+ + G+ HP+L AK L G ++ IVLL++K+
Sbjct: 6 SLFHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAGGKRLRPA--IVLLVAKSTS-- 61
Query: 144 NVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKI 203
E +E K QR LAE+TE+I T+ LVH +++ E V F KI
Sbjct: 62 ---EQQEIKPG-----QRRLAEITEIIHTASLVHDDVIDECSTRRGEKTV--HKLFNTKI 111
Query: 204 ALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKT 263
A+L+GD+L + S LA + N +V++++ + D E E
Sbjct: 112 AVLAGDFLFAQSSWYLANIGNLEVVKVITKVITDFAEGE--------------------- 150
Query: 264 SPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQF 323
I + L + ++ D+ ++ SL+ SC+G L ++++ Y +
Sbjct: 151 -------IRQGLVHFDPSISIDDYIEKSFYKTASLVAASCRGAAMLNDLNSQMHNDLYLY 203
Query: 324 GKHLALAWQACLDL-----------EPFTSNYAPGTIFNLTSAPVMFHLEQE-KSDELLN 371
GKH+ LA+Q D+ +P +++ G NLT AP++F L QE K D+L+
Sbjct: 204 GKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNG---NLT-APILFALTQEGKLDQLIQ 259
Query: 372 EINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNI 431
E D ++ K G+ K L K+ Q A+ LQ +S ++L +
Sbjct: 260 R-----EFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQFLPKSAPVSSLKEL 314
>sp|Q1XDL8|PREA_PORYE Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1
Length = 323
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 62/359 (17%)
Query: 85 SLRWLLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLN 144
SL + + E+ ++ +L+ + G+ HP+L A L++ + +V L++KA
Sbjct: 6 SLFYPVEQELCSLEKNLKAVAGTRHPILYAAAKHLFDA-GGKRVRPALVFLVAKATSE-- 62
Query: 145 VDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIA 204
++D G Q+ LAE+TE+I T+ LVH I++ V N F KIA
Sbjct: 63 ----KQDINTG----QKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHN--LFNTKIA 112
Query: 205 LLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTS 264
+L+GD+L + S LA + N +V+ +S + D E E
Sbjct: 113 VLAGDFLFAQSSWYLANIENLAVVKAISKVITDFAEGE---------------------- 150
Query: 265 PDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFG 324
I + L + ++ + ++ SL+ SC+G L G + ++ Y +G
Sbjct: 151 ------IRQGLVHFDPSISIDAYIEKSFYKTASLIAASCRGAAMLNGSNHQINNDLYLYG 204
Query: 325 KHLALAWQACLDL-----------EPFTSNYAPGTIFNLTSAPVMFHLEQEKS-DELLNE 372
KH+ LA+Q D+ +P ++ G NLTS P++F L QE S ++L++
Sbjct: 205 KHMGLAFQIMDDVLDITGSTKSLGKPAGADLING---NLTS-PLLFSLTQEASLNDLIDR 260
Query: 373 INKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNI 431
E + D ++ + G+ K L K+ Q A+ LQ +S ++L +
Sbjct: 261 -----EFCNSTDIASTLFLIKRSGGITKAKDLAKEQVQAALSCLQFLPQSTPVSSLKEL 314
>sp|Q54VJ9|DPS1_DICDI Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1
PE=3 SV=1
Length = 456
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 59/335 (17%)
Query: 109 HPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEMEEDKAAGVLHSQRALAEVTE 168
HP+L + S + + + IVLL+SKA ++ V SQ LAE+ E
Sbjct: 167 HPILSSISSYYFELKGK-RIRPTIVLLLSKAL------------SSTVHGSQLKLAEIVE 213
Query: 169 MIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLV 228
MI T+ LVH +++ V+ + ++ NK+A+L GDYLL+ + L+ +RN +
Sbjct: 214 MIHTASLVHDDVID--EASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPDVT 271
Query: 229 ELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWT 288
E MS A+ +L E EF+ + SN ++ + ++
Sbjct: 272 ECMSTALAELVEGEFMQAK--------------------SNGVV----------SFDNYL 301
Query: 289 TRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSN---YA 345
+ L GSL+ SC+ L+G D+ + +FGK+L LA+Q DL +T +
Sbjct: 302 QKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECG 361
Query: 346 PGTIFNLT----SAPVMFHLEQEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLT 401
T +LT +APV++ ++ E L I + + +++ K +V+ G+ T
Sbjct: 362 KATSVDLTLGLATAPVLYATQEFPQLEKL--IKRKFSEIGDVEEAK--RLVALSKGIEKT 417
Query: 402 KQLQKQHSQQAMKVLQVFKESDAR---TALSNIIV 433
+ L ++ +A++ L +S++R LS+I+V
Sbjct: 418 RNLAIEYCNRAIQSLLKLPQSESRDLLITLSHIVV 452
>sp|Q9TLS1|PREA_CYACA Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1
Length = 323
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 160/354 (45%), Gaps = 62/354 (17%)
Query: 90 LSDEIANVALHLRKLVGSNHPLLKTA-KSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEM 148
+ +++ N+ L KL+ N+P+L A K LL ++ IVLL++KA
Sbjct: 11 VKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPA--IVLLVAKAI-------- 60
Query: 149 EEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVN---ITPGLYSEPVVLNDMTFGNKIAL 205
DK + SQ+ LAEVTE+I T+ L+H +V+ I G S + TFGNKIA+
Sbjct: 61 --DKNKKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSV-----NKTFGNKIAV 113
Query: 206 LSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSP 265
+GD+L + S LA + N +V+ +S + DL E E LQ N
Sbjct: 114 FAGDFLFAQSSWYLANINNLEVVKAISKVITDLAEGE------LQQN------------- 154
Query: 266 DDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGK 325
L + ++ + ++ SL+ SCK L+ D L + Y +GK
Sbjct: 155 ---------LTQFNTYYSIIKYLEKSFNKTASLIAASCKSCCLLSDFDQSLNSKFYNYGK 205
Query: 326 HLALAWQACLDLEPFT-SNYAPGTIF-------NLTSAPVMFHLEQEKSDELLNEINKGT 377
+L LA+Q D+ T S+ A G + NLT APV+F L K+ +L I +
Sbjct: 206 NLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLT-APVLFAL--TKNSKLFKIIER-- 260
Query: 378 ESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNI 431
E D + NI+ + + + L +H + A+ ++ S + +L I
Sbjct: 261 EFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIKDLPTSSEKDSLIEI 314
>sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dps1 PE=1 SV=1
Length = 378
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 53/362 (14%)
Query: 89 LLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGLIVLLISKAAG------- 141
L+ +E+ ++ +R+++ SN L+ S Y Q +VLL+SKA
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEEC-SKYYTIAQGKQMRPSLVLLMSKATSLCHGIDR 94
Query: 142 ------HLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLN 195
+++ D++ +L SQ LA++TEMI + L+H +++ P +
Sbjct: 95 SVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPS--S 152
Query: 196 DMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLP 255
++ FGN+ ++L+G+++L+ + + +A LRN + EL++ + DL EFL + N +
Sbjct: 153 NVAFGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLK----NTMD 208
Query: 256 PQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAE 315
P L K S D + ++ L SL+ KSCK + L
Sbjct: 209 PSSLEIKQSNFDY------------------YIEKSFLKTASLISKSCKASTILGQCSPT 250
Query: 316 LQEQGYQFGKHLALAWQACLDLEPFTSN-----YAPGT--IFNLTSAPVMFHLEQ--EKS 366
+ ++G+ + A+Q D+ +TS A G L +APV+F ++ E
Sbjct: 251 VATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELG 310
Query: 367 DELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDART 426
++N N + D ++ ++V + T K++ ++A L +S AR
Sbjct: 311 AMIVNRFNHPS------DIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPDSPARK 364
Query: 427 AL 428
AL
Sbjct: 365 AL 366
>sp|Q33DR2|DPS1_MOUSE Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1
PE=1 SV=1
Length = 409
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 55/309 (17%)
Query: 131 LIVLLISKAAG--HLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLY 188
+IV+L+++A H N EM+ SQR++A V EMI T+ LVH +++
Sbjct: 133 IIVVLMARACNIHHNNAREMQA--------SQRSIALVAEMIHTATLVHDDVIDDASSRR 184
Query: 189 SEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFL--GR 246
+ V + +G K A+L+GD +LS + LA + N +V +++ + DL EFL G
Sbjct: 185 GKHTV--NKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGS 242
Query: 247 RDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGT 306
++ +N A + + SL+ SCK
Sbjct: 243 KENENE------------------------------RFAHYLEKTFKKTASLIANSCKAV 272
Query: 307 LKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSN-------YAPGTIFNLTSAPVMF 359
L D + E YQ+GK++ +A+Q D+ FTS + + + PV+F
Sbjct: 273 SVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLF 332
Query: 360 HLEQEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVF 419
+Q E+ I + ++D + Y V + G++ T L +Q+ +A++ ++
Sbjct: 333 ACQQ--FPEMNAMIMRRFSLPGDVDRARQY--VLQSDGVQQTTYLAQQYCHKAVREIRKL 388
Query: 420 KESDARTAL 428
+ S R AL
Sbjct: 389 RPSTERDAL 397
>sp|Q5T2R2|DPS1_HUMAN Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1
PE=1 SV=1
Length = 415
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 54/315 (17%)
Query: 131 LIVLLISKAAGHLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSE 190
+IV L+++A + + + V SQRA+A + EMI T+ LVH +++ +
Sbjct: 139 IIVALMARAC------NIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDDASSRRGK 192
Query: 191 PVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFL--GRRD 248
V + +G K A+L+GD +LS + LA + N ++ +++ + DL EFL G ++
Sbjct: 193 HTV--NKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKE 250
Query: 249 LQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLK 308
+N A + + SL+ SCK
Sbjct: 251 NENE------------------------------RFAHYLEKTFKKTASLIANSCKAVSV 280
Query: 309 LAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSN-------YAPGTIFNLTSAPVMFHL 361
L D + E YQ+GK++ +A+Q D+ FTS + L + PV+F
Sbjct: 281 LGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFAC 340
Query: 362 EQEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFK- 420
+Q E+ I + ++D + Y V + G++ T L +Q+ +A++ + +
Sbjct: 341 QQ--FPEMNAMIMRRFSLPGDVDRARQY--VLQSDGVQQTTYLAQQYCHEAIREISKLRP 396
Query: 421 --ESDARTALSNIIV 433
E DA LS I++
Sbjct: 397 SPERDALIQLSEIVL 411
>sp|P31114|HEPS2_BACSU Heptaprenyl diphosphate synthase component 2 OS=Bacillus subtilis
(strain 168) GN=hepT PE=1 SV=1
Length = 348
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 147/360 (40%), Gaps = 64/360 (17%)
Query: 89 LLSDEIANVALHLRKLVGSNHPLLKTAKSLLYNGRNNMQAWGL----IVLLISKAAGHLN 144
L+D+I + L + V S++PLL A G + +QA G + +L+S G +
Sbjct: 37 FLNDDIDVIERELEQTVRSDYPLLSEA------GLHLLQAGGKRIRPVFVLLSGMFGDYD 90
Query: 145 VDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIA 204
++++ + +A EMI + LVH +++ +P + + N+IA
Sbjct: 91 INKI------------KYVAVTLEMIHMASLVHDDVIDDAELRRGKPTI--KAKWDNRIA 136
Query: 205 LLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTS 264
+ +GDY+L+ S +E+M+ N P + L+
Sbjct: 137 MYTGDYMLAGS------------LEMMTRI----------------NEPKAHRILSQTIV 168
Query: 265 PDDSNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFG 324
+I + D+ M L + R L+ SC+ +G D ++ + Y FG
Sbjct: 169 EVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFG 228
Query: 325 KHLALAWQACLDLEPFTSNY------APGTIF--NLTSAPVMFHLEQEKSDELLNEINKG 376
++ +++Q D+ FTS G + N+T PV++ L K+ L N++
Sbjct: 229 YYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVT-LPVLYAL---KNPALKNQLKLI 284
Query: 377 TESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNIIVAMG 436
T + + + K + + + + + Q+A + L AR++L+ I +G
Sbjct: 285 NSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLPRGRARSSLAAIAKYIG 344
>sp|O13851|DLP1_SCHPO Decaprenyl-diphosphate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dlp1 PE=1 SV=1
Length = 294
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 18/118 (15%)
Query: 131 LIVLLISKAAGHLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSE 190
L+VLL+S+A+ +N D + + + LA VTE+I ++++H +NI +E
Sbjct: 91 LLVLLMSRAS--VNGDPPSQQ----LFQRYKQLARVTELIHAANIIH---INIGEEQSNE 141
Query: 191 PVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRD 248
+ K+A L GDYLL + +LA L N + E+M+ + +L E F R++
Sbjct: 142 QI---------KLATLVGDYLLGKASVDLAHLENNAITEIMASVIANLVEGHFGSRQN 190
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 59/331 (17%)
Query: 111 LLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDEMEEDKAAGVLHSQRALAEVTEMI 170
++ +K ++ G M+ ++ LL + A G N+ H+Q+ LA + EM+
Sbjct: 35 VMSVSKHVVEAGGKRMRP--IMCLLAAYACGETNLK-----------HAQK-LAAIIEML 80
Query: 171 RTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALRNQHLVEL 230
T+ LVH +V+ + P + T+ N+ A+L GD+L++ + L L N L++
Sbjct: 81 HTATLVHDDVVDESGLRRGRPTA--NATWNNQTAVLVGDFLIARAFDLLVDLDNMILLKD 138
Query: 231 MSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPALADWTTR 290
S ++ E E L LQ P T+ D QI+ T+R
Sbjct: 139 FSTGTCEIAEGEVL---QLQAQHQP------DTTEDIYLQIIHG------------KTSR 177
Query: 291 NVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTS-------N 343
L + +G LAG+ E +E +F H A+Q D+ +TS N
Sbjct: 178 -------LFELATEGAAILAGK-PEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKN 229
Query: 344 YAPGTIFNLTSAPV---MFHLEQEKSDELLNEINKGTESVTNIDYKKVYNIVSKGPGMRL 400
+ + P+ M + + E+ D + I G S ++V IV +
Sbjct: 230 IGDDLMEGKPTLPLIAAMQNTQGEQRDLIRRSIATGGTS----QLEQVIAIVQNSGALDY 285
Query: 401 TKQLQKQHSQQAMKVLQVFKESDARTALSNI 431
+ + +++A++ L++ ES R AL N+
Sbjct: 286 CHKRATEETERALQALEILPESTYRQALVNL 316
>sp|P55785|HEPS2_GEOSE Heptaprenyl diphosphate synthase component 2 OS=Geobacillus
stearothermophilus GN=hepT PE=3 SV=1
Length = 320
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 137/360 (38%), Gaps = 64/360 (17%)
Query: 89 LLSDEIANVALHLRKLVGSNH-PLLKTAKSLLYNGRNNMQAWGLIVLLISKAAGHLNVDE 147
LSD++A V L + V S + PL + A LL G ++ + +L++ G +++
Sbjct: 9 FLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRP---VFVLLAARFGQYDLER 65
Query: 148 MEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLS 207
M+ +A E+I + LVH +++ P + + N+ A+ +
Sbjct: 66 MKH------------VAVALELIHMASLVHDDVIDDADLRRGRPTI--KAKWSNRFAMYT 111
Query: 208 GDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDD 267
GDYL + S +A L NP Q L
Sbjct: 112 GDYLFARSLERMAEL----------------------------GNPRAHQVLAKTIVEVC 143
Query: 268 SNQIMESLDELPMTPALADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQFGKHL 327
+I + D+ L + R L+ SC+ AG + ++ Y FG ++
Sbjct: 144 RGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYV 203
Query: 328 ALAWQACLDLEPFT-----------SNYAPGTIFNLTSAPVMFHLEQEKSDELLNEINKG 376
+++Q D+ FT S+ G + + PV++ L E+ + +
Sbjct: 204 GMSFQITDDILDFTGTEEQLGKPAGSDLLQGNV----TLPVLYALSDERVKAAIAAVGPE 259
Query: 377 TESVTNIDYKKVYNIVSKGPGMRLTKQLQKQHSQQAMKVLQVFKESDARTALSNIIVAMG 436
T+ + V + + + + + L ++ +A+ +L ++AR L ++ + +G
Sbjct: 260 TDVA---EMAAVISAIKRTDAIERSYALSDRYLDKALHLLDGLPMNEARGLLRDLALYIG 316
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 163 LAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAAL 222
+A + E I T+ L+H +V+ + + + FGN ++L GD++ + + + +L
Sbjct: 69 IAALIEFIHTATLLHDDVVDESDMRRGKATA--NAAFGNAASVLVGDFIYTRAFQMMTSL 126
Query: 223 RNQHLVELMSGAVRDLTESEFL 244
+ ++E+MS AV + E E L
Sbjct: 127 GSLKVLEVMSEAVNVIAEGEVL 148
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 163 LAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAAL 222
+A + E I T+ L+H +V+ + + + FGN ++L GD++ + + + +L
Sbjct: 69 IAALIEFIHTATLLHDDVVDESDMRRGKATA--NAAFGNAASVLVGDFIYTRAFQMMTSL 126
Query: 223 RNQHLVELMSGAVRDLTESEFL 244
+ ++E+MS AV + E E L
Sbjct: 127 GSLKVLEVMSEAVNVIAEGEVL 148
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 164 AEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDMTFGNKIALLSGDYLLSNSCSELAALR 223
A E I T+ L+H +V+ + + FGN ++L GD++ + + +A L
Sbjct: 76 ATFVEFIHTASLLHDDVVDESDMRRGRATA--NAEFGNAASVLVGDFIYTRAFQLVAQLE 133
Query: 224 NQHLVELMSGAVRDLTESEFLGRRDLQNNPLPPQFLTTKTSPDDSNQIMESLDELPMTPA 283
+ ++ +M+ A L E E Q L P+ S E
Sbjct: 134 SLKILSIMADATNVLAEGEV-------------QQLMNVNDPETS--------EANYMRV 172
Query: 284 LADWTTRNVLSAGSLLGKSCKGTLKLAGQDAELQEQGYQ-FGKHLALAWQACLDLEPFTS 342
+ T R AG GT E QE+ Q +G++L A+Q D+ +++
Sbjct: 173 IYSKTARLFEVAGQAAAIVAGGT--------EAQEKALQDYGRYLGTAFQLVDDVLDYSA 224
Query: 343 N 343
N
Sbjct: 225 N 225
>sp|Q46DR6|SYR_METBF Arginine--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=argS PE=3 SV=1
Length = 569
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 297 SLLGKSCKGTLKLAGQDAELQEQGYQFGKHLALAWQACLDLEPFTSNYAPGTIFNLTSAP 356
S++G + L+ AG D E+Q G+ +A+ AC E S + I ++
Sbjct: 137 SIIGDTLARILRRAGYDVEVQYYVNDMGRQIAVVSWACERFELDLSRKSDSAIADVY--- 193
Query: 357 VMFHLEQEKSDELLNEINKGTESVTNIDYKKV---YNIVS 393
+ ++E +K+ E + EI+ E V D K + Y VS
Sbjct: 194 IKANVELDKNPEYVKEIDALMEKVEAGDVKTIDSFYKAVS 233
>sp|P02750|A2GL_HUMAN Leucine-rich alpha-2-glycoprotein OS=Homo sapiens GN=LRG1 PE=1 SV=2
Length = 347
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 138 KAAGHLNVDEMEEDKAAGVLHSQRALAEVTEMIRTSHLVHKGIVNITPGLYSEPVVLNDM 197
KA GHL++ K L LA T ++RT L + + P L P+ L +
Sbjct: 164 KALGHLDLSGNRLRKLPPGL-----LANFT-LLRTLDLGENQLETLPPDLLRGPLQLERL 217
Query: 198 TF-GNKIALLSGDYLLSNSCSELAALRNQHLVELMSGAVRDLTESEFLGRRDLQNNPL 254
GNK+ +L D LL L L + +GA + L + + L DL NN L
Sbjct: 218 HLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQGLRQLDML---DLSNNSL 272
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,650,405
Number of Sequences: 539616
Number of extensions: 6017867
Number of successful extensions: 16268
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 16083
Number of HSP's gapped (non-prelim): 137
length of query: 438
length of database: 191,569,459
effective HSP length: 120
effective length of query: 318
effective length of database: 126,815,539
effective search space: 40327341402
effective search space used: 40327341402
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)