Query psy11204
Match_columns 161
No_of_seqs 157 out of 686
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 20:48:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11204.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11204hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2265|consensus 100.0 4.2E-38 9E-43 244.3 11.7 136 7-149 6-179 (179)
2 cd06495 p23_NUDCD3_like p23-li 100.0 1.6E-29 3.4E-34 183.0 11.9 95 16-118 2-101 (102)
3 cd06494 p23_NUDCD2_like p23-li 100.0 3.2E-29 6.9E-34 178.6 11.7 93 14-108 1-93 (93)
4 cd06492 p23_mNUDC_like p23-lik 99.9 2E-26 4.4E-31 162.2 10.0 84 21-108 1-87 (87)
5 cd06493 p23_NUDCD1_like p23_NU 99.9 3.1E-24 6.6E-29 149.8 10.3 84 21-108 1-85 (85)
6 cd06467 p23_NUDC_like p23_like 99.9 2.5E-21 5.4E-26 133.8 10.3 83 21-108 1-85 (85)
7 cd06465 p23_hB-ind1_like p23_l 99.8 3.8E-19 8.2E-24 128.9 9.8 88 19-118 1-94 (108)
8 PF04969 CS: CS domain; Inter 99.7 2.4E-17 5.3E-22 110.9 10.8 74 19-94 1-79 (79)
9 cd06468 p23_CacyBP p23_like do 99.7 1.5E-17 3.3E-22 116.7 9.7 84 19-108 2-92 (92)
10 cd06463 p23_like Proteins cont 99.7 2.6E-16 5.5E-21 106.5 8.5 80 23-108 1-84 (84)
11 cd06466 p23_CS_SGT1_like p23_l 99.7 2.5E-16 5.4E-21 108.2 7.9 79 22-107 1-83 (84)
12 cd06469 p23_DYX1C1_like p23_li 99.7 3.5E-16 7.6E-21 106.3 8.0 77 23-108 1-78 (78)
13 cd00237 p23 p23 binds heat sho 99.6 1E-14 2.2E-19 106.2 10.3 83 19-109 2-88 (106)
14 cd06489 p23_CS_hSgt1_like p23_ 99.6 4.5E-15 9.7E-20 102.8 8.0 79 22-107 1-83 (84)
15 cd06488 p23_melusin_like p23_l 99.6 1.1E-14 2.4E-19 102.0 9.0 81 20-107 2-86 (87)
16 KOG4379|consensus 99.3 4E-12 8.6E-17 111.5 8.1 110 13-126 284-394 (596)
17 KOG1309|consensus 99.3 6.9E-12 1.5E-16 98.5 6.6 85 18-109 3-91 (196)
18 PLN03088 SGT1, suppressor of 99.2 3.4E-11 7.4E-16 103.5 8.5 84 19-109 157-244 (356)
19 cd06490 p23_NCB5OR p23_like do 99.2 2.4E-10 5.1E-15 80.2 8.5 80 21-107 1-86 (87)
20 KOG3158|consensus 99.1 1.7E-10 3.6E-15 90.2 5.8 91 16-117 5-100 (180)
21 cd00298 ACD_sHsps_p23-like Thi 98.9 5.5E-09 1.2E-13 68.5 7.1 69 23-94 1-80 (80)
22 KOG3260|consensus 98.5 2.7E-07 5.9E-12 73.0 7.0 83 19-108 75-162 (224)
23 KOG1667|consensus 98.3 1.8E-06 3.9E-11 71.6 6.6 87 13-109 212-303 (320)
24 COG0071 IbpA Molecular chapero 97.5 0.001 2.2E-08 50.4 9.6 79 16-97 38-135 (146)
25 COG5091 SGT1 Suppressor of G2 97.5 5E-05 1.1E-09 64.0 2.2 83 20-109 178-265 (368)
26 PF00011 HSP20: Hsp20/alpha cr 97.3 0.0034 7.5E-08 44.1 9.0 73 22-97 1-90 (102)
27 cd06472 ACD_ScHsp26_like Alpha 97.2 0.003 6.5E-08 44.1 8.3 72 20-94 1-92 (92)
28 cd06471 ACD_LpsHSP_like Group 97.0 0.0077 1.7E-07 41.9 8.2 71 20-94 2-93 (93)
29 PF08190 PIH1: pre-RNA process 96.7 0.0095 2.1E-07 50.1 8.6 67 26-92 259-326 (328)
30 cd06464 ACD_sHsps-like Alpha-c 96.7 0.015 3.2E-07 39.1 7.9 69 23-94 2-88 (88)
31 cd06478 ACD_HspB4-5-6 Alpha-cr 96.2 0.027 5.9E-07 38.8 6.8 68 25-94 4-83 (83)
32 cd06526 metazoan_ACD Alpha-cry 96.2 0.027 5.7E-07 38.5 6.5 65 28-94 7-83 (83)
33 cd06497 ACD_alphaA-crystallin_ 95.8 0.052 1.1E-06 37.7 6.9 69 24-94 6-86 (86)
34 cd06498 ACD_alphaB-crystallin_ 95.8 0.059 1.3E-06 37.3 7.0 69 25-95 4-84 (84)
35 cd06470 ACD_IbpA-B_like Alpha- 95.8 0.17 3.6E-06 35.2 9.3 66 24-94 6-90 (90)
36 cd06475 ACD_HspB1_like Alpha c 95.6 0.091 2E-06 36.5 7.5 69 22-92 4-84 (86)
37 cd06479 ACD_HspB7_like Alpha c 95.6 0.065 1.4E-06 37.0 6.5 67 25-94 5-81 (81)
38 PRK10743 heat shock protein Ib 95.5 0.15 3.2E-06 38.6 8.7 73 19-96 35-125 (137)
39 cd06476 ACD_HspB2_like Alpha c 95.3 0.12 2.5E-06 35.8 6.9 67 26-94 5-83 (83)
40 PRK11597 heat shock chaperone 94.4 0.38 8.2E-06 36.7 8.5 75 17-96 31-123 (142)
41 cd06482 ACD_HspB10 Alpha cryst 93.7 0.44 9.5E-06 33.3 7.0 64 26-91 6-84 (87)
42 cd06481 ACD_HspB9_like Alpha c 93.5 0.5 1.1E-05 32.8 7.0 64 27-92 6-85 (87)
43 cd06477 ACD_HspB3_Like Alpha c 92.1 1.1 2.4E-05 31.0 7.1 64 26-91 5-80 (83)
44 PF05455 GvpH: GvpH; InterPro 90.9 2.2 4.7E-05 33.9 8.5 70 24-97 97-170 (177)
45 KOG2265|consensus 87.2 0.26 5.6E-06 39.0 0.8 26 126-151 123-148 (179)
46 cd06480 ACD_HspB8_like Alpha-c 85.5 5 0.00011 28.3 6.6 65 26-92 13-89 (91)
47 COG3354 FlaG Putative archaeal 65.0 30 0.00064 26.8 6.2 70 20-96 62-132 (154)
48 PF11069 DUF2870: Protein of u 63.7 17 0.00037 26.2 4.5 35 87-136 28-62 (98)
49 cd06464 ACD_sHsps-like Alpha-c 53.7 42 0.00092 21.7 5.0 35 25-59 53-87 (88)
50 KOG3591|consensus 48.6 1.2E+02 0.0026 23.7 7.5 66 30-97 74-151 (173)
51 cd00298 ACD_sHsps_p23-like Thi 47.1 56 0.0012 20.0 4.6 32 27-58 47-78 (80)
52 PF00011 HSP20: Hsp20/alpha cr 39.6 57 0.0012 22.2 4.0 34 26-59 53-86 (102)
53 cd06526 metazoan_ACD Alpha-cry 39.3 67 0.0014 21.4 4.2 32 28-59 50-82 (83)
54 cd06497 ACD_alphaA-crystallin_ 34.4 57 0.0012 22.2 3.2 31 29-59 54-85 (86)
55 cd06477 ACD_HspB3_Like Alpha c 33.2 82 0.0018 21.5 3.9 31 29-59 51-82 (83)
56 PF12100 DUF3576: Domain of un 33.1 71 0.0015 23.2 3.6 36 8-49 25-66 (103)
57 PF13349 DUF4097: Domain of un 29.7 87 0.0019 23.0 3.8 30 27-56 117-146 (166)
58 COG1470 Predicted membrane pro 26.5 88 0.0019 28.7 3.8 25 27-51 443-467 (513)
59 cd06472 ACD_ScHsp26_like Alpha 26.3 1.4E+02 0.0031 20.1 4.2 32 28-59 60-91 (92)
60 COG4703 Uncharacterized protei 23.8 58 0.0013 22.1 1.7 30 2-34 21-50 (74)
No 1
>KOG2265|consensus
Probab=100.00 E-value=4.2e-38 Score=244.30 Aligned_cols=136 Identities=29% Similarity=0.437 Sum_probs=126.0
Q ss_pred Ccc-cCCccccCCCCeEEEeeCCEEEEEEEcCCCC-CccceEEEEecCEEEEEeCCee-eeeccccCceecCccEEEEec
Q psy11204 7 FDE-KGGVVKCPTPWGSWWQTLDEVFIEVILTDKV-RSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIWTLEN 83 (161)
Q Consensus 7 ~~~-~~~~~~~~~~~Y~W~Qt~~eV~I~I~lp~~~-~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~deStW~i~d 83 (161)
++| +.+.+.|..+.|+|+||+.+|+|.|+||+++ ++++|.|.|..+||+|+++|++ +++|+|++.|++|+|+|+|++
T Consensus 6 ~eE~p~~~ng~~~~~y~W~QtL~EV~i~i~vp~~~~ksk~v~~~Iq~~hI~V~~kg~~~ildG~L~~~vk~des~WtiEd 85 (179)
T KOG2265|consen 6 KEEKPNSGNGADEEKYTWDQTLEEVEIQIPVPPGTAKSKDVHCSIQSKHIKVGLKGQPPILDGELSHSVKVDESTWTIED 85 (179)
T ss_pred cccCCcccCCccccceeeeeehhheEEEeecCCCCcccceEEEEeeeeEEEEecCCCCceecCccccccccccceEEecC
Confidence 355 8899999999999999999999999999999 9999999999999999999997 999999999999999999999
Q ss_pred CCeEEEEEEEeccCcccccccccceeccccCCCCCc-----------------------------------cchHHHHHH
Q psy11204 84 NGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDP-----------------------------------TIFHEMKKK 128 (161)
Q Consensus 84 ~~~~l~I~L~K~~~~~~~~~W~~L~~~~~G~~~iD~-----------------------------------~~~de~~~~ 128 (161)
++ .+.|.|.|.+++ .||.+|++ |+++||+ +++||.+++
T Consensus 86 ~k-~i~i~l~K~~~~---eWW~~ll~---gep~ID~~ki~~e~skl~dldeEtra~vekmmfdq~qk~~~~p~sde~~~~ 158 (179)
T KOG2265|consen 86 GK-MIVILLKKSNKM---EWWDSLLE---GEPEIDTKKIEPEESKLSDLDEETRATVEKMMFDQRQKSMGLPTSDELKKH 158 (179)
T ss_pred CE-EEEEEeeccchH---HHHHHHHc---CCCCCCccccChhhhhhhhccHHHHHhhhccchhHHHhhcCCCCCchhhHH
Confidence 87 889999999874 89999999 9999983 366777888
Q ss_pred HHHHHHHHhCCCCCccCCccC
Q psy11204 129 MDLEKFQIENPGFDFSRAKLA 149 (161)
Q Consensus 129 ~~l~~~~~~~p~~Dfs~a~~~ 149 (161)
++|++|+.+||+||||+|.||
T Consensus 159 d~Lkk~~~~~~~~~f~~a~~~ 179 (179)
T KOG2265|consen 159 DMLKKFMDQHPEMDFSNAKFN 179 (179)
T ss_pred HHHHHHHHhCCCCCCchhccC
Confidence 999999999999999999986
No 2
>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins. Little is known about the function of the proteins in this subgroup.
Probab=99.96 E-value=1.6e-29 Score=183.03 Aligned_cols=95 Identities=18% Similarity=0.387 Sum_probs=88.0
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCC-CCccceEEEEecCEEEEEeCC---e-eeeeccccCceecCccEEEEecCCeEEEE
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDK-VRSRDIAIKCTNTEISCTIAG---K-ELFQGKLLDVVHGDEIIWTLENNGTLLNI 90 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~-~~~kdv~V~i~~~~L~V~vkg---~-~~i~g~L~~~V~~deStW~i~d~~~~l~I 90 (161)
+.++.|+|+||.++|+|+|+||++ +++||+.|+|++++|+|+++| + ++|+|+||++|++|+|+|+|++++ .|+|
T Consensus 2 ~~~e~Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~~~~l~v~~~~~~~~~~~i~G~L~~~V~~des~Wtled~~-~l~I 80 (102)
T cd06495 2 AVRENYTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQSSSIRVSVRDGGGEKVLMEGEFTHKINTENSLWSLEPGK-CVLL 80 (102)
T ss_pred CcCCceEEEeECCeEEEEEECCCCCccceEEEEEEEcCEEEEEEecCCCCceEEeCcccCcccCccceEEEeCCC-EEEE
Confidence 457899999999999999999998 579999999999999999974 3 599999999999999999999987 7899
Q ss_pred EEEeccCcccccccccceeccccCCCCC
Q psy11204 91 VLPKAEFKGKEQIWNSLFVNSKENYATD 118 (161)
Q Consensus 91 ~L~K~~~~~~~~~W~~L~~~~~G~~~iD 118 (161)
+|+|... .||++|++ |+++||
T Consensus 81 ~L~K~~~----~wW~~v~~---g~~~iD 101 (102)
T cd06495 81 SLSKCSE----VWWNAVLK---GEEEID 101 (102)
T ss_pred EEEECCC----cccchhhC---CCCcCC
Confidence 9999974 79999999 999998
No 3
>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins. Little is known about the function of the proteins in this subgroup.
Probab=99.96 E-value=3.2e-29 Score=178.62 Aligned_cols=93 Identities=45% Similarity=0.853 Sum_probs=87.3
Q ss_pred cccCCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 14 VKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 14 ~~~~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
|||.+++|.|+||.++|+|+|+||++++++|+.|.|++++|+|+++|+++|+|+||++|++|+|+|++++++ +|+|+|.
T Consensus 1 ~~~~~~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~~~~l~V~~~g~~~l~G~L~~~I~~destWtled~k-~l~I~L~ 79 (93)
T cd06494 1 VPCKTPWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLGSRDISLAVKGQEVLKGKLFDSVVADECTWTLEDRK-LIRIVLT 79 (93)
T ss_pred CCccCCCcEEEeEcCEEEEEEECCCCCceeeEEEEEEcCEEEEEECCEEEEcCcccCccCcccCEEEEECCc-EEEEEEE
Confidence 689999999999999999999999999999999999999999999998899999999999999999999987 6799999
Q ss_pred eccCcccccccccce
Q psy11204 94 KAEFKGKEQIWNSLF 108 (161)
Q Consensus 94 K~~~~~~~~~W~~L~ 108 (161)
|++++ .|+||++|+
T Consensus 80 K~~~~-~~~~W~sl~ 93 (93)
T cd06494 80 KSNRD-AGNCWKSLL 93 (93)
T ss_pred eCCCC-CCccccccC
Confidence 99863 457999985
No 4
>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.
Probab=99.94 E-value=2e-26 Score=162.18 Aligned_cols=84 Identities=23% Similarity=0.479 Sum_probs=78.7
Q ss_pred eEEEeeCCEEEEEEEcCCC--CCccceEEEEecCEEEEEeCCee-eeeccccCceecCccEEEEecCCeEEEEEEEeccC
Q psy11204 21 GSWWQTLDEVFIEVILTDK--VRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~--~~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~ 97 (161)
|+|+||.++|+|+|+||.+ ++++|++|+|++++|+|+++|++ +|+|+||++|++|+|+|++++++ .|+|+|+|+++
T Consensus 1 Y~W~QT~~ev~v~v~l~~~~~~~~kdv~v~i~~~~l~v~~~g~~~~i~G~L~~~V~~des~Wtled~~-~l~i~L~K~~~ 79 (87)
T cd06492 1 YRWTQTLSEVELKVPFKVSFRLKGKDVVVDIQRKHLKVGLKGQPPIIDGELYNEVKVEESSWLIEDGK-VVTVNLEKINK 79 (87)
T ss_pred CccEeecCEEEEEEECCCCCCccceEEEEEEecCEEEEEECCCceEEeCcccCcccccccEEEEeCCC-EEEEEEEECCC
Confidence 8999999999999999887 89999999999999999999975 99999999999999999999876 68999999986
Q ss_pred cccccccccce
Q psy11204 98 KGKEQIWNSLF 108 (161)
Q Consensus 98 ~~~~~~W~~L~ 108 (161)
++||++|+
T Consensus 80 ---~~wW~~l~ 87 (87)
T cd06492 80 ---MEWWSRLV 87 (87)
T ss_pred ---CccccccC
Confidence 38999985
No 5
>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins. NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.
Probab=99.91 E-value=3.1e-24 Score=149.77 Aligned_cols=84 Identities=25% Similarity=0.456 Sum_probs=78.0
Q ss_pred eEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe-eeeeccccCceecCccEEEEecCCeEEEEEEEeccCcc
Q psy11204 21 GSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK-ELFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKG 99 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~-~~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~~~ 99 (161)
|.|+||.++|+|+|++|++++++|++|.|++++|+|.++|. ++++|+||+.|++|+|+|++++++ .|+|+|.|+++
T Consensus 1 Y~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~~~~l~v~~~~~~~~~~g~L~~~I~~d~Stw~i~~~~-~l~i~L~K~~~-- 77 (85)
T cd06493 1 YYWQQTEEDLTLTIRLPEDTTKEDIRIKFLPDHISIALKDQAPLLEGKLYSSIDHESSTWIIKENK-SLEVSLIKKDE-- 77 (85)
T ss_pred CccEEeCCEEEEEEECCCCCChhhEEEEEecCEEEEEeCCCCeEEeCcccCcccccCcEEEEeCCC-EEEEEEEECCC--
Confidence 89999999999999999999999999999999999999864 599999999999999999998875 58999999986
Q ss_pred cccccccce
Q psy11204 100 KEQIWNSLF 108 (161)
Q Consensus 100 ~~~~W~~L~ 108 (161)
+.||++|+
T Consensus 78 -~~~W~~L~ 85 (85)
T cd06493 78 -GPTWPELV 85 (85)
T ss_pred -CccccccC
Confidence 47999984
No 6
>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins. Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext
Probab=99.86 E-value=2.5e-21 Score=133.79 Aligned_cols=83 Identities=36% Similarity=0.577 Sum_probs=77.0
Q ss_pred eEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe-eeeeccccCceecCccEEEEec-CCeEEEEEEEeccCc
Q psy11204 21 GSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK-ELFQGKLLDVVHGDEIIWTLEN-NGTLLNIVLPKAEFK 98 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~-~~i~g~L~~~V~~deStW~i~d-~~~~l~I~L~K~~~~ 98 (161)
|.|+||.++|+|+|.+|++++++|+.|.+++++|+|.++|. .++.|.||++|++++|+|++++ ++ |+|+|.|++.
T Consensus 1 y~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~~~~l~v~~~~~~~~l~~~L~~~I~~~~s~w~~~~~~~--v~i~L~K~~~- 77 (85)
T cd06467 1 YSWTQTLDEVTVTIPLPEGTKSKDVKVEITPKHLKVGVKGGEPLLDGELYAKVKVDESTWTLEDGKL--LEITLEKRNE- 77 (85)
T ss_pred CEEEeeCCEEEEEEECCCCCcceeEEEEEEcCEEEEEECCCCceEcCcccCceeEcCCEEEEeCCCE--EEEEEEECCC-
Confidence 89999999999999999999999999999999999999954 4999999999999999999998 55 8999999985
Q ss_pred ccccccccce
Q psy11204 99 GKEQIWNSLF 108 (161)
Q Consensus 99 ~~~~~W~~L~ 108 (161)
+.+|++|+
T Consensus 78 --~~~W~~L~ 85 (85)
T cd06467 78 --GEWWPSLV 85 (85)
T ss_pred --CccccccC
Confidence 46999986
No 7
>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.
Probab=99.80 E-value=3.8e-19 Score=128.92 Aligned_cols=88 Identities=26% Similarity=0.357 Sum_probs=78.9
Q ss_pred CCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC----ee-eeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 19 PWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG----KE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg----~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
|.|.|+||.++|+|+|.+|.. +++.|.|++++|+|.+.| +. .++++||++|++++|+|++.+++ |+|+|.
T Consensus 1 p~~~W~Qt~~~V~i~i~~~~~---~~~~V~~~~~~l~v~~~~~~~~~~y~~~~~L~~~I~pe~s~~~v~~~k--veI~L~ 75 (108)
T cd06465 1 PPVLWAQRSDVVYLTIELPDA---KDPKIKLEPTSLSFKAKGGGGGKKYEFDLEFYKEIDPEESKYKVTGRQ--IEFVLR 75 (108)
T ss_pred CceeeeECCCEEEEEEEeCCC---CCcEEEEECCEEEEEEEcCCCCeeEEEEeEhhhhccccccEEEecCCe--EEEEEE
Confidence 579999999999999999863 999999999999998753 22 78999999999999999999866 899999
Q ss_pred ecc-CcccccccccceeccccCCCCC
Q psy11204 94 KAE-FKGKEQIWNSLFVNSKENYATD 118 (161)
Q Consensus 94 K~~-~~~~~~~W~~L~~~~~G~~~iD 118 (161)
|++ . .||++|.+ |+++++
T Consensus 76 K~~~~----~~W~~L~~---~~~k~~ 94 (108)
T cd06465 76 KKEAG----EYWPRLTK---EKGKLP 94 (108)
T ss_pred ECCCC----CCCccccc---CCCCCC
Confidence 998 5 69999999 888875
No 8
>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown. The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....
Probab=99.74 E-value=2.4e-17 Score=110.89 Aligned_cols=74 Identities=34% Similarity=0.645 Sum_probs=65.5
Q ss_pred CCeEEEeeCCEEEEEEEc-CCCCCccceEEEEecCEEEEEeC-C--ee-eeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 19 PWGSWWQTLDEVFIEVIL-TDKVRSRDIAIKCTNTEISCTIA-G--KE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~l-p~~~~~kdv~V~i~~~~L~V~vk-g--~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
|+|.|+||.++|+|+|++ |..++++|+.|.|++++|+|.++ + .. +++++||++|++++|+|++.+++ |+|+|.
T Consensus 1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~--i~i~L~ 78 (79)
T PF04969_consen 1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFTDTSLSVSIKSGDGKEYLLEGELFGEIDPDESTWKVKDNK--IEITLK 78 (79)
T ss_dssp SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEETTEEEEEEEETTSCEEEEEEEBSS-BECCCEEEEEETTE--EEEEEE
T ss_pred CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEEeeEEEEEEEccCCceEEEEEEEeeeEcchhcEEEEECCE--EEEEEE
Confidence 689999999999999999 55588999999999999999986 2 34 89999999999999999999976 899998
Q ss_pred e
Q psy11204 94 K 94 (161)
Q Consensus 94 K 94 (161)
|
T Consensus 79 K 79 (79)
T PF04969_consen 79 K 79 (79)
T ss_dssp B
T ss_pred C
Confidence 8
No 9
>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes
Probab=99.74 E-value=1.5e-17 Score=116.71 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=72.9
Q ss_pred CCeEEEeeCCEEEEEEEcCCCCC--ccceEEEEecCEEEEEeCC---ee--eeeccccCceecCccEEEEecCCeEEEEE
Q psy11204 19 PWGSWWQTLDEVFIEVILTDKVR--SRDIAIKCTNTEISCTIAG---KE--LFQGKLLDVVHGDEIIWTLENNGTLLNIV 91 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~lp~~~~--~kdv~V~i~~~~L~V~vkg---~~--~i~g~L~~~V~~deStW~i~d~~~~l~I~ 91 (161)
.+|.|+||.++|+|+|.+|.... ++++.|.|++++|.|.+.+ .+ +..+.||++|++++|+|++.+++ |+|.
T Consensus 2 ~~y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~~L~~~I~~e~s~~~~~~~k--i~i~ 79 (92)
T cd06468 2 TKYAWDQSDKFVKIYITLKGVHQLPKENIQVEFTERSFELKVHDLNGKNYRFTINRLLKKIDPEKSSFKVKTDR--IVIT 79 (92)
T ss_pred ceeeeecCCCEEEEEEEccCCCcCCcccEEEEecCCEEEEEEECCCCcEEEEEehHhhCccCccccEEEEeCCE--EEEE
Confidence 47999999999999999986543 5999999999999998853 33 55668999999999999999876 8999
Q ss_pred EEeccCcccccccccce
Q psy11204 92 LPKAEFKGKEQIWNSLF 108 (161)
Q Consensus 92 L~K~~~~~~~~~W~~L~ 108 (161)
|.|++. .+|++|.
T Consensus 80 L~K~~~----~~W~~L~ 92 (92)
T cd06468 80 LAKKKE----KKWESLT 92 (92)
T ss_pred EEeCCC----CccCccC
Confidence 999985 6999983
No 10
>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of
Probab=99.68 E-value=2.6e-16 Score=106.52 Aligned_cols=80 Identities=35% Similarity=0.665 Sum_probs=71.9
Q ss_pred EEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC---ee-eeeccccCceecCccEEEEecCCeEEEEEEEeccCc
Q psy11204 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG---KE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEFK 98 (161)
Q Consensus 23 W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg---~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~~ 98 (161)
|+|+.++|+|+|.+|... ++++.|.+++++|+|.+.+ .. .+++.|+++|++++|+|++.++. |+|.|.|+..
T Consensus 1 W~Q~~~~v~i~v~~~~~~-~~~~~v~~~~~~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~--l~i~L~K~~~- 76 (84)
T cd06463 1 WYQTLDEVTITIPLKDVT-KKDVKVEFTPKSLTVSVKGGGGKEYLLEGELFGPIDPEESKWTVEDRK--IEITLKKKEP- 76 (84)
T ss_pred CcccccEEEEEEEcCCCC-ccceEEEEecCEEEEEeeCCCCCceEEeeEccCccchhhcEEEEeCCE--EEEEEEECCC-
Confidence 999999999999998655 9999999999999999874 34 88999999999999999999865 8999999986
Q ss_pred ccccccccce
Q psy11204 99 GKEQIWNSLF 108 (161)
Q Consensus 99 ~~~~~W~~L~ 108 (161)
+.+|++|+
T Consensus 77 --~~~W~~l~ 84 (84)
T cd06463 77 --GEWWPRLE 84 (84)
T ss_pred --CCCCcccC
Confidence 47999984
No 11
>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1). Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug
Probab=99.67 E-value=2.5e-16 Score=108.15 Aligned_cols=79 Identities=24% Similarity=0.407 Sum_probs=71.3
Q ss_pred EEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEEEeccC
Q psy11204 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 22 ~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~ 97 (161)
.|+||.++|+|+|.+| ++.++++.|.+++++|.|.+. +.. .++++||++|++++|+|++.+++ |+|.|.|+..
T Consensus 1 dW~Qt~~~v~i~v~~~-~~~~~~v~v~~~~~~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~--vei~L~K~~~ 77 (84)
T cd06466 1 DWYQTDTSVTVTIYAK-NVDKEDVKVEFNEQSLSVSIILPGGSEYQLELDLFGPIDPEQSKVSVLPTK--VEITLKKAEP 77 (84)
T ss_pred CccccCCEEEEEEEEC-CCCHHHCEEEEecCEEEEEEECCCCCeEEEecccccccCchhcEEEEeCeE--EEEEEEcCCC
Confidence 4999999999999986 788999999999999999875 334 78999999999999999999977 8999999986
Q ss_pred cccccccccc
Q psy11204 98 KGKEQIWNSL 107 (161)
Q Consensus 98 ~~~~~~W~~L 107 (161)
.+|++|
T Consensus 78 ----~~W~~L 83 (84)
T cd06466 78 ----GSWPSL 83 (84)
T ss_pred ----CCCccC
Confidence 599998
No 12
>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1. The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.
Probab=99.66 E-value=3.5e-16 Score=106.29 Aligned_cols=77 Identities=27% Similarity=0.409 Sum_probs=69.6
Q ss_pred EEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCee-eeeccccCceecCccEEEEecCCeEEEEEEEeccCcccc
Q psy11204 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKE 101 (161)
Q Consensus 23 W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~~~~~ 101 (161)
|+||.++|+|+|.+| ++++.++.|.+++++|+|.. .+ .+.++|++.|++++|+|++++++ |+|+|.|++.
T Consensus 1 W~Qt~~~v~i~i~~p-~v~~~~v~v~~~~~~l~i~~--~~~~~~~~l~~~I~~e~~~~~~~~~~--l~i~L~K~~~---- 71 (78)
T cd06469 1 WSQTDEDVKISVPLK-GVKTSKVDIFCSDLYLKVNF--PPYLFELDLAAPIDDEKSSAKIGNGV--LVFTLVKKEP---- 71 (78)
T ss_pred CcccCCEEEEEEEeC-CCccccceEEEecCEEEEcC--CCEEEEEeCcccccccccEEEEeCCE--EEEEEEeCCC----
Confidence 999999999999998 68999999999999988866 34 78899999999999999999866 8999999986
Q ss_pred cccccce
Q psy11204 102 QIWNSLF 108 (161)
Q Consensus 102 ~~W~~L~ 108 (161)
.+|++|.
T Consensus 72 ~~W~~L~ 78 (78)
T cd06469 72 GIWEALC 78 (78)
T ss_pred CcccccC
Confidence 5999983
No 13
>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
Probab=99.60 E-value=1e-14 Score=106.16 Aligned_cols=83 Identities=19% Similarity=0.302 Sum_probs=74.1
Q ss_pred CCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEEEe
Q psy11204 19 PWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPK 94 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K 94 (161)
|.+.|+|+.+.|+|+|.+|+ ++|++|+|++++|++... |.. .++.+||++|++++|++.+.+.+ |+|.|.|
T Consensus 2 p~v~WaQr~~~V~ltI~v~d---~~d~~v~l~~~~l~f~~~~~~g~~y~~~l~l~~~I~pe~Sk~~v~~r~--ve~~L~K 76 (106)
T cd00237 2 AKTLWYDRRDYVFIEFCVED---SKDVKVDFEKSKLTFSCLNGDNVKIYNEIELYDRVDPNDSKHKRTDRS--ILCCLRK 76 (106)
T ss_pred CcceeeECCCEEEEEEEeCC---CCCcEEEEecCEEEEEEECCCCcEEEEEEEeecccCcccCeEEeCCce--EEEEEEe
Confidence 67899999999999999987 799999999999999874 445 67889999999999999998866 8999999
Q ss_pred ccCccccccccccee
Q psy11204 95 AEFKGKEQIWNSLFV 109 (161)
Q Consensus 95 ~~~~~~~~~W~~L~~ 109 (161)
++. +.+|++|.+
T Consensus 77 ~~~---~~~WprL~k 88 (106)
T cd00237 77 GKE---GVAWPRLTK 88 (106)
T ss_pred CCC---CCCCchhhc
Confidence 985 358999998
No 14
>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.
Probab=99.60 E-value=4.5e-15 Score=102.82 Aligned_cols=79 Identities=23% Similarity=0.475 Sum_probs=70.7
Q ss_pred EEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC---ee-eeeccccCceecCccEEEEecCCeEEEEEEEeccC
Q psy11204 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG---KE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 22 ~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg---~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~ 97 (161)
.|+|+.+.|+|+|.+ +++..+++.|+|++++|+|.+++ .. .++.+||++|++++|+|++.+++ |+|.|.|++.
T Consensus 1 dW~Q~~~~V~iti~~-k~~~~~~~~v~~~~~~l~~~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~k--iei~L~K~~~ 77 (84)
T cd06489 1 DWYQTESQVVITILI-KNVKPEDVSVEFEKRELSATVKLPSGNDYSLKLHLLHPIVPEQSSYKILSTK--IEIKLKKTEA 77 (84)
T ss_pred CccccCCEEEEEEEE-CCCCHHHCEEEEeCCEEEEEEECCCCCcEEEeeecCceecchhcEEEEeCcE--EEEEEEcCCC
Confidence 499999999999987 57888999999999999998763 34 78889999999999999999876 8999999975
Q ss_pred cccccccccc
Q psy11204 98 KGKEQIWNSL 107 (161)
Q Consensus 98 ~~~~~~W~~L 107 (161)
.+|++|
T Consensus 78 ----~~W~~L 83 (84)
T cd06489 78 ----IRWSKL 83 (84)
T ss_pred ----CCCccC
Confidence 699998
No 15
>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins. Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C
Probab=99.58 E-value=1.1e-14 Score=101.96 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=71.4
Q ss_pred CeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEEEec
Q psy11204 20 WGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKA 95 (161)
Q Consensus 20 ~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~ 95 (161)
+|.|+||.+.|+|+|.+ +++..+++.|.+++++|+|.+. |.. .+..+||++|+++.|+|.+...+ |+|.|.|+
T Consensus 2 R~dW~Qs~~~V~ItI~~-k~~~~~~~~v~~~~~~l~v~~~~~~~~~y~~~l~L~~~I~~~~s~~~v~~~k--vei~L~K~ 78 (87)
T cd06488 2 RHDWHQTGSHVVVSVYA-KNSNPELSVVEANSTVLTIHIVFEGNKEFQLDIELWGVIDVEKSSVNMLPTK--VEIKLRKA 78 (87)
T ss_pred CccEeeCCCEEEEEEEE-CcCCccceEEEecCCEEEEEEECCCCceEEEEeeccceEChhHcEEEecCcE--EEEEEEeC
Confidence 79999999999999977 6888999999999999887553 444 67779999999999999999877 89999999
Q ss_pred cCcccccccccc
Q psy11204 96 EFKGKEQIWNSL 107 (161)
Q Consensus 96 ~~~~~~~~W~~L 107 (161)
+. .+|++|
T Consensus 79 ~~----~~W~~L 86 (87)
T cd06488 79 EP----GSWAKL 86 (87)
T ss_pred CC----CcCccC
Confidence 86 599998
No 16
>KOG4379|consensus
Probab=99.33 E-value=4e-12 Score=111.55 Aligned_cols=110 Identities=24% Similarity=0.352 Sum_probs=92.1
Q ss_pred ccccCCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccccCceecCccEEEEecCCeEEEEEE
Q psy11204 13 VVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 13 ~~~~~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
.=..+.|.|+|.||.+++.|++.+|...+++++.|.+.+++|.+.+....+|+|+||+.|..+.|+|.|.... -|++.|
T Consensus 284 ~e~~~~p~y~w~qt~d~~~~~~~~p~~~~~~~i~Iq~~~~~v~v~~~dh~~~~g~lyasv~he~s~~ii~ean-~Le~sl 362 (596)
T KOG4379|consen 284 LENGGPPSYSWSQTDDNVLIRFNVPSTASAKEINIQGSKTTVVVKHLDHVIFDGELYASVGHELSAFIIAEAN-GLELSL 362 (596)
T ss_pred hhccCCccceeeeccCcceEEEecccccccceEEEEecCceEEEEeeeeEEeccchhhhccccchhhhhhhhc-cceEEE
Confidence 4446789999999999999999999999999999999999999999877899999999999999999998743 279999
Q ss_pred EeccCcccccccccceeccc-cCCCCCccchHHHH
Q psy11204 93 PKAEFKGKEQIWNSLFVNSK-ENYATDPTIFHEMK 126 (161)
Q Consensus 93 ~K~~~~~~~~~W~~L~~~~~-G~~~iD~~~~de~~ 126 (161)
.|++. +..|++|+.+++ |+-.-|....+..+
T Consensus 363 ~K~de---~~twprL~~~dksGEideDveiCad~a 394 (596)
T KOG4379|consen 363 TKADE---IQTWPRLFAQDKSGEIDEDVEICADVA 394 (596)
T ss_pred eeccc---ccccchheeecccccchhhhHHHHHHH
Confidence 99975 589999999665 44332444444444
No 17
>KOG1309|consensus
Probab=99.28 E-value=6.9e-12 Score=98.53 Aligned_cols=85 Identities=26% Similarity=0.401 Sum_probs=74.7
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
..+|.|+||.++|+|+| +.+++...||.|.|+.+.|++.++ |.. .+.+.||++|.|+.|+..+-..+ |+|+|.
T Consensus 3 k~r~DwyQt~~~vvIti-~~k~v~~~~v~v~~s~~~l~~~~~~~~g~~~~l~~~L~~~I~pe~~s~k~~stK--VEI~L~ 79 (196)
T KOG1309|consen 3 KIRHDWYQTETSVVITI-FAKNVPKEDVNVEISENTLSIVIQLPSGSEYNLQLKLYHEIIPEKSSFKVFSTK--VEITLA 79 (196)
T ss_pred cccceeecCCceEEEEE-EecCCCccceeEEeecceEEEEEecCCchhhhhhHHhcccccccceeeEeeeee--EEEEec
Confidence 35899999999999999 558899999999999998888776 334 67788999999999999999877 899999
Q ss_pred eccCccccccccccee
Q psy11204 94 KAEFKGKEQIWNSLFV 109 (161)
Q Consensus 94 K~~~~~~~~~W~~L~~ 109 (161)
|++. ..|.+|.+
T Consensus 80 K~~~----irW~~Le~ 91 (196)
T KOG1309|consen 80 KAEI----IRWESLEK 91 (196)
T ss_pred cccc----hhhhhhhc
Confidence 9774 89999997
No 18
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional
Probab=99.23 E-value=3.4e-11 Score=103.49 Aligned_cols=84 Identities=21% Similarity=0.307 Sum_probs=74.3
Q ss_pred CCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEEEe
Q psy11204 19 PWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPK 94 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K 94 (161)
.+|.|+||.+.|+|+|.+ +++.+.++.|.|++++|+|.+. |.. .+...||+.|+++.|+.++...+ |+|.|.|
T Consensus 157 ~r~dWyQs~~~V~i~i~~-k~~~~~~~~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~K--iei~l~K 233 (356)
T PLN03088 157 YRHEFYQKPEEVVVTVFA-KGVPAENVNVDFGEQILSVVIEVPGEDAYHLQPRLFGKIIPDKCKYEVLSTK--IEIRLAK 233 (356)
T ss_pred cccceeecCCEEEEEEEe-cCCChHHcEEEeecCEEEEEEecCCCcceeecccccccccccccEEEEecce--EEEEEec
Confidence 589999999999999977 6899999999999999998874 434 56679999999999999999877 8999999
Q ss_pred ccCccccccccccee
Q psy11204 95 AEFKGKEQIWNSLFV 109 (161)
Q Consensus 95 ~~~~~~~~~W~~L~~ 109 (161)
++. ..|++|..
T Consensus 234 ~~~----~~W~~L~~ 244 (356)
T PLN03088 234 AEP----ITWASLEY 244 (356)
T ss_pred CCC----CCcccccc
Confidence 985 68999975
No 19
>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins. NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.
Probab=99.16 E-value=2.4e-10 Score=80.19 Aligned_cols=80 Identities=25% Similarity=0.300 Sum_probs=64.0
Q ss_pred eEEEeeCCEEEEEEEcCC-CCCccceEEEEecCEEEEEeC--Cee-eeeccccCceecCccEEEEec--CCeEEEEEEEe
Q psy11204 21 GSWWQTLDEVFIEVILTD-KVRSRDIAIKCTNTEISCTIA--GKE-LFQGKLLDVVHGDEIIWTLEN--NGTLLNIVLPK 94 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~-~~~~kdv~V~i~~~~L~V~vk--g~~-~i~g~L~~~V~~deStW~i~d--~~~~l~I~L~K 94 (161)
|.|+||.+.|+|+|..+. +....++.+.+..++|+|.+. +.. .++.+|+++|+++ ++-++.. ++ |+|.|.|
T Consensus 1 ~DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~L~~~I~~~-~~~~~~~~~~K--VEI~L~K 77 (87)
T cd06490 1 YDWFQTDSEVTIVVYTKSKGNPADIVIVDDQQRELRVEIILGDKSYLLHLDLSNEVQWP-CEVRISTETGK--IELVLKK 77 (87)
T ss_pred CCceECCCEEEEEEEEcccCCCCccEEEECCCCEEEEEEECCCceEEEeeeccccCCCC-cEEEEcccCce--EEEEEEc
Confidence 689999999999997643 566777778888888888764 554 6777999999755 4777774 46 8999999
Q ss_pred ccCcccccccccc
Q psy11204 95 AEFKGKEQIWNSL 107 (161)
Q Consensus 95 ~~~~~~~~~W~~L 107 (161)
++. ..|++|
T Consensus 78 ~e~----~~W~~L 86 (87)
T cd06490 78 KEP----EKWTSL 86 (87)
T ss_pred CCC----CccccC
Confidence 986 589987
No 20
>KOG3158|consensus
Probab=99.09 E-value=1.7e-10 Score=90.20 Aligned_cols=91 Identities=16% Similarity=0.277 Sum_probs=76.4
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC-e---e-eeeccccCceecCccEEEEecCCeEEEE
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG-K---E-LFQGKLLDVVHGDEIIWTLENNGTLLNI 90 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg-~---~-~i~g~L~~~V~~deStW~i~d~~~~l~I 90 (161)
...|...|+|+.+-|+++|-|+. ++++.|+++++.|.+..++ . . ...-+||+.|+|+.|+-++.. +.|..
T Consensus 5 ~~~p~v~Waqr~~~vyltv~Ved---~~d~~v~~e~~~l~fs~k~~~d~~~~~~~ief~~eIdpe~sk~k~~~--r~if~ 79 (180)
T KOG3158|consen 5 MQPPEVKWAQRRDLVYLTVCVED---AKDVHVNLEPSKLTFSCKSGADNHKYENEIEFFDEIDPEKSKHKRTS--RSIFC 79 (180)
T ss_pred ccCCcchhhhhcCeEEEEEEecc---CccceeeccccEEEEEeccCCCceeeEEeeehhhhcCHhhccccccc--eEEEE
Confidence 35678899999999999999998 8899999999999998774 2 2 455799999999999999985 35788
Q ss_pred EEEeccCcccccccccceeccccCCCC
Q psy11204 91 VLPKAEFKGKEQIWNSLFVNSKENYAT 117 (161)
Q Consensus 91 ~L~K~~~~~~~~~W~~L~~~~~G~~~i 117 (161)
.|.|++. +.+||+|++ ...++
T Consensus 80 i~~K~e~---~~~WprLtk---eK~K~ 100 (180)
T KOG3158|consen 80 ILRKKEL---GEYWPRLTK---EKAKL 100 (180)
T ss_pred EEEcccc---ccccchhhh---ccccc
Confidence 8888885 489999999 65554
No 21
>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind
Probab=98.92 E-value=5.5e-09 Score=68.51 Aligned_cols=69 Identities=32% Similarity=0.404 Sum_probs=60.5
Q ss_pred EEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC----------ee-eeeccccCceecCccEEEEecCCeEEEEE
Q psy11204 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG----------KE-LFQGKLLDVVHGDEIIWTLENNGTLLNIV 91 (161)
Q Consensus 23 W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg----------~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~ 91 (161)
|+|+.+.+.|+|.+|. ..++++.|.++++.|.|.... .. .....|++.|+++.++|++.++. |.|.
T Consensus 1 ~~q~~~~v~i~i~~~~-~~~~~i~v~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~~--l~i~ 77 (80)
T cd00298 1 WYQTDDEVVVTVDLPG-VKKEDIKVEVEDNVLTISGKREEEEERERSYGEFERSFELPEDVDPEKSKASLENGV--LEIT 77 (80)
T ss_pred CEEcCCEEEEEEECCC-CCHHHeEEEEECCEEEEEEEEcCCCcceEeeeeEEEEEECCCCcCHHHCEEEEECCE--EEEE
Confidence 8999999999999976 569999999999999998652 23 67788999999999999999855 8999
Q ss_pred EEe
Q psy11204 92 LPK 94 (161)
Q Consensus 92 L~K 94 (161)
|.|
T Consensus 78 l~K 80 (80)
T cd00298 78 LPK 80 (80)
T ss_pred EcC
Confidence 987
No 22
>KOG3260|consensus
Probab=98.53 E-value=2.7e-07 Score=73.04 Aligned_cols=83 Identities=18% Similarity=0.285 Sum_probs=72.8
Q ss_pred CCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee--eeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 19 PWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE--LFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~--~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
..|.|.|+...|-++|.| .|+....|+|.|++.+|.+.++ |+. .+--+|.++|.++.|.-.+..+. |.|.++
T Consensus 75 t~ygWDQs~kfVK~yItL-~GV~eenVqv~ftp~Sldl~v~dlqGK~y~~~vnnLlk~I~vEks~~kvKtd~--v~I~~k 151 (224)
T KOG3260|consen 75 TLYGWDQSNKFVKMYITL-EGVDEENVQVEFTPMSLDLKVHDLQGKNYRMIVNNLLKPISVEKSSKKVKTDT--VLILCK 151 (224)
T ss_pred hhcCccccCCeeEEEEEe-ecccccceeEEecccceeeeeeecCCcceeeehhhhccccChhhcccccccce--EEEeeh
Confidence 469999999999999999 8899999999999999999886 554 66778999999999999998755 799998
Q ss_pred eccCcccccccccce
Q psy11204 94 KAEFKGKEQIWNSLF 108 (161)
Q Consensus 94 K~~~~~~~~~W~~L~ 108 (161)
|.+. ..|.-|.
T Consensus 152 kVe~----~rwd~Lt 162 (224)
T KOG3260|consen 152 KVEN----TRWDYLT 162 (224)
T ss_pred hhhc----ccchHHH
Confidence 8886 6898875
No 23
>KOG1667|consensus
Probab=98.30 E-value=1.8e-06 Score=71.60 Aligned_cols=87 Identities=30% Similarity=0.358 Sum_probs=68.7
Q ss_pred ccccCCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee--eeeccccCceecCccEEEEecCCeE
Q psy11204 13 VVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE--LFQGKLLDVVHGDEIIWTLENNGTL 87 (161)
Q Consensus 13 ~~~~~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~--~i~g~L~~~V~~deStW~i~d~~~~ 87 (161)
|++| +|.|.||...|+|.|.- ++.-...-.|+..+..|.|.+. |+- -++-+|++-|++++|.-.+...+
T Consensus 212 V~~c---R~Dwhqt~~~Vti~VY~-k~~lpe~s~iean~~~l~V~ivf~~gna~fd~d~kLwgvvnve~s~v~m~~tk-- 285 (320)
T KOG1667|consen 212 VVKC---RHDWHQTNGFVTINVYA-KGALPETSNIEANGTTLHVSIVFGFGNASFDLDYKLWGVVNVEESSVVMGETK-- 285 (320)
T ss_pred cccc---hhhhhhcCCeEEEEEEe-ccCCcccceeeeCCeEEEEEEEecCCCceeeccceeeeeechhhceEEeecce--
Confidence 6778 89999999999999965 3333444557777777776654 443 56779999999999999999877
Q ss_pred EEEEEEeccCccccccccccee
Q psy11204 88 LNIVLPKAEFKGKEQIWNSLFV 109 (161)
Q Consensus 88 l~I~L~K~~~~~~~~~W~~L~~ 109 (161)
|+|+|.|+++ .-|++|--
T Consensus 286 VEIsl~k~ep----~sWa~Le~ 303 (320)
T KOG1667|consen 286 VEISLKKAEP----GSWARLEF 303 (320)
T ss_pred EEEEEeccCC----CCcccccC
Confidence 8999999997 58999943
No 24
>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=97.54 E-value=0.001 Score=50.44 Aligned_cols=79 Identities=29% Similarity=0.241 Sum_probs=64.4
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC--Ce---------------eee--eccccCceecCc
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA--GK---------------ELF--QGKLLDVVHGDE 76 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk--g~---------------~~i--~g~L~~~V~~de 76 (161)
+..|.|...++.+++.|++.| +|++++||.|.+..+.|+|..+ ++ --| .-.|...|+++.
T Consensus 38 ~~~P~vdi~e~~~~~~I~~el-PG~~kedI~I~~~~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~ 116 (146)
T COG0071 38 TGTPPVDIEETDDEYRITAEL-PGVDKEDIEITVEGNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEV 116 (146)
T ss_pred CCCCcEEEEEcCCEEEEEEEc-CCCChHHeEEEEECCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccc
Confidence 468999999999999999999 5899999999999998888654 20 011 236888888888
Q ss_pred cEEEEecCCeEEEEEEEeccC
Q psy11204 77 IIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 77 StW~i~d~~~~l~I~L~K~~~ 97 (161)
..-++.+| +|.|.|.|...
T Consensus 117 ~~A~~~nG--vL~I~lpk~~~ 135 (146)
T COG0071 117 IKAKYKNG--LLTVTLPKAEP 135 (146)
T ss_pred eeeEeeCc--EEEEEEecccc
Confidence 88888874 58999999875
No 25
>COG5091 SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only]
Probab=97.52 E-value=5e-05 Score=63.99 Aligned_cols=83 Identities=16% Similarity=0.055 Sum_probs=69.2
Q ss_pred CeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Ce-e-eeeccccCceecCccEEEEecCCeEEEEEEEe
Q psy11204 20 WGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GK-E-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPK 94 (161)
Q Consensus 20 ~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~-~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K 94 (161)
.|.|+||...+.|.| +.+.+...+|.+.++++.|+|.++ +. . .+...||+.|.|+-+...+-.. .++++|.|
T Consensus 178 ~yd~s~Ts~t~~ifi-y~~pv~deqVs~~~e~NTL~I~~q~~~~~~~~~~~~~Ly~ev~P~~~s~k~fsK--~~e~~l~K 254 (368)
T COG5091 178 AYDFSETSDTAIIFI-YRPPVGDEQVSPVLEGNTLSISYQPRRLRLWNDITISLYKEVYPDIRSIKSFSK--RVEVHLRK 254 (368)
T ss_pred eeeccccceeEEEEE-ecCCCCccccceeecCCcceeeeeccccchHHHhhhhhhhhcCcchhhhhhcch--hheehhhh
Confidence 789999999999988 446678899999999999999886 32 2 5667899999999998888873 57999999
Q ss_pred ccCccccccccccee
Q psy11204 95 AEFKGKEQIWNSLFV 109 (161)
Q Consensus 95 ~~~~~~~~~W~~L~~ 109 (161)
.+. ..|..|.+
T Consensus 255 V~~----v~W~~l~~ 265 (368)
T COG5091 255 VEM----VRWGGLNG 265 (368)
T ss_pred hhh----hhhccccc
Confidence 985 78998864
No 26
>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry.; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....
Probab=97.27 E-value=0.0034 Score=44.08 Aligned_cols=73 Identities=30% Similarity=0.331 Sum_probs=54.4
Q ss_pred EEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe---------------eee--eccccCceecCccEEEEecC
Q psy11204 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK---------------ELF--QGKLLDVVHGDEIIWTLENN 84 (161)
Q Consensus 22 ~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~---------------~~i--~g~L~~~V~~deStW~i~d~ 84 (161)
.|.++.+.+.|.+.|| |+.+++|+|.+..+.|.|..... .-| .-.|...|+++.-+.+++++
T Consensus 1 di~e~~~~~~i~~~lp-G~~~edi~I~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~~~G 79 (102)
T PF00011_consen 1 DIKEDEDEYIIKVDLP-GFDKEDIKIKVDDNKLVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASYENG 79 (102)
T ss_dssp EEEESSSEEEEEEE-T-TS-GGGEEEEEETTEEEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEETTS
T ss_pred CeEECCCEEEEEEECC-CCChHHEEEEEecCccceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEecCC
Confidence 3789999999999996 88899999999999999865421 011 33678888889889999664
Q ss_pred CeEEEEEEEeccC
Q psy11204 85 GTLLNIVLPKAEF 97 (161)
Q Consensus 85 ~~~l~I~L~K~~~ 97 (161)
+|.|.+.|...
T Consensus 80 --vL~I~~pk~~~ 90 (102)
T PF00011_consen 80 --VLTITIPKKEE 90 (102)
T ss_dssp --EEEEEEEBSSS
T ss_pred --EEEEEEEcccc
Confidence 58999999875
No 27
>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st
Probab=97.24 E-value=0.003 Score=44.06 Aligned_cols=72 Identities=21% Similarity=0.333 Sum_probs=55.4
Q ss_pred CeEEEeeCCEEEEEEEcCCCCCccceEEEEecC-EEEEEeCC--------e-----e----ee--eccccCceecCccEE
Q psy11204 20 WGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNT-EISCTIAG--------K-----E----LF--QGKLLDVVHGDEIIW 79 (161)
Q Consensus 20 ~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~-~L~V~vkg--------~-----~----~i--~g~L~~~V~~deStW 79 (161)
++.|.+|.+.+.|.+.|| |++++||.|.+..+ .|+|...- . + -| .-.|...|+++.-+.
T Consensus 1 ~~dv~E~~~~~~i~~~lP-Gv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A 79 (92)
T cd06472 1 RVDWKETPEAHVFKADVP-GVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKA 79 (92)
T ss_pred CccEEEcCCeEEEEEECC-CCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEE
Confidence 357899999999999995 68999999999865 78776520 0 0 11 226788888888899
Q ss_pred EEecCCeEEEEEEEe
Q psy11204 80 TLENNGTLLNIVLPK 94 (161)
Q Consensus 80 ~i~d~~~~l~I~L~K 94 (161)
++.++ +|.|+|-|
T Consensus 80 ~~~nG--vL~I~lPK 92 (92)
T cd06472 80 FLENG--VLTVTVPK 92 (92)
T ss_pred EEECC--EEEEEecC
Confidence 99974 58999876
No 28
>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me
Probab=96.96 E-value=0.0077 Score=41.87 Aligned_cols=71 Identities=28% Similarity=0.343 Sum_probs=54.1
Q ss_pred CeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCee----------e-----eec------cccCceecCccE
Q psy11204 20 WGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKE----------L-----FQG------KLLDVVHGDEII 78 (161)
Q Consensus 20 ~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~----------~-----i~g------~L~~~V~~deSt 78 (161)
+..+.++.+.+.|.+.|| |++++||+|.+..+.|.|...... + -.| .|. .|+++...
T Consensus 2 ~~di~e~~~~~~i~~~lP-Gv~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i~ 79 (93)
T cd06471 2 KTDIKETDDEYIVEADLP-GFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEIK 79 (93)
T ss_pred ceeEEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHCE
Confidence 457899999999999997 899999999999999998542110 0 111 344 67778888
Q ss_pred EEEecCCeEEEEEEEe
Q psy11204 79 WTLENNGTLLNIVLPK 94 (161)
Q Consensus 79 W~i~d~~~~l~I~L~K 94 (161)
.++.++ +|.|+|.|
T Consensus 80 A~~~dG--vL~I~lPK 93 (93)
T cd06471 80 AKYENG--VLKITLPK 93 (93)
T ss_pred EEEECC--EEEEEEcC
Confidence 899875 48999876
No 29
>PF08190 PIH1: pre-RNA processing PIH1/Nop17
Probab=96.74 E-value=0.0095 Score=50.07 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=58.8
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCee-eeeccccCceecCccEEEEecCCeEEEEEE
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
..+.+.|+|.||.-.+.+++.+.+..+.|.|.+.+.. .++-.|.++|+.+.+.-.+....+.|.|+|
T Consensus 259 ~p~~lvv~i~LP~~~s~~~i~LdV~~~~l~l~~~~~~y~L~l~LP~~V~~~~~~Akf~~~~~~L~vtl 326 (328)
T PF08190_consen 259 SPEELVVEIELPGVESASDIDLDVSEDRLSLSSPKPKYRLDLPLPYPVDEDNGKAKFDKKTKTLTVTL 326 (328)
T ss_pred CCceEEEEEECCCcCccceeEEEEeCCEEEEEeCCCceEEEccCCCcccCCCceEEEccCCCEEEEEE
Confidence 4688999999997779999999999999999998744 899999999999999888876656788887
No 30
>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=96.72 E-value=0.015 Score=39.07 Aligned_cols=69 Identities=26% Similarity=0.319 Sum_probs=54.5
Q ss_pred EEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe-----------------e-eeeccccCceecCccEEEEecC
Q psy11204 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK-----------------E-LFQGKLLDVVHGDEIIWTLENN 84 (161)
Q Consensus 23 W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~-----------------~-~i~g~L~~~V~~deStW~i~d~ 84 (161)
+.++.+.+.|.+.|| ++.+++|.|.+..+.|.|..+-. . .-.-.|...|+++..+.++.++
T Consensus 2 i~e~~~~~~i~~~lp-g~~~~~i~V~v~~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~G 80 (88)
T cd06464 2 VYETDDAYVVEADLP-GFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLENG 80 (88)
T ss_pred cEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeCC
Confidence 567889999999995 58899999999999999874311 1 2233688899999899999984
Q ss_pred CeEEEEEEEe
Q psy11204 85 GTLLNIVLPK 94 (161)
Q Consensus 85 ~~~l~I~L~K 94 (161)
+|.|.+.|
T Consensus 81 --~L~I~~pk 88 (88)
T cd06464 81 --VLTITLPK 88 (88)
T ss_pred --EEEEEEcC
Confidence 58998865
No 31
>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol
Probab=96.20 E-value=0.027 Score=38.80 Aligned_cols=68 Identities=16% Similarity=0.229 Sum_probs=51.4
Q ss_pred eeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----e--eccccCceecCccEEEEecCCeEEEEEE
Q psy11204 25 QTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----F--QGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 25 Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i--~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
.+.+.+.|.+.|| |+++.||.|++..+.|+|..+-+ .+ | .-.|...|+++.-+-++..++ +|.|+|
T Consensus 4 ~~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dG-vL~I~~ 81 (83)
T cd06478 4 LDKDRFSVNLDVK-HFSPEELSVKVLGDFVEIHGKHEERQDEHGFISREFHRRYRLPPGVDPAAITSSLSADG-VLTISG 81 (83)
T ss_pred ecCceEEEEEECC-CCCHHHeEEEEECCEEEEEEEEceEcCCCCEEEEEEEEEEECCCCcChHHeEEEECCCC-EEEEEe
Confidence 5678899999996 89999999999999999865311 02 2 236777888888888885344 589988
Q ss_pred Ee
Q psy11204 93 PK 94 (161)
Q Consensus 93 ~K 94 (161)
-|
T Consensus 82 PK 83 (83)
T cd06478 82 PR 83 (83)
T ss_pred cC
Confidence 65
No 32
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=96.16 E-value=0.027 Score=38.52 Aligned_cols=65 Identities=17% Similarity=0.305 Sum_probs=50.4
Q ss_pred CEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe-----------e-eeeccccCceecCccEEEEecCCeEEEEEEEe
Q psy11204 28 DEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK-----------E-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLPK 94 (161)
Q Consensus 28 ~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~-----------~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K 94 (161)
+.+.|.+.|| |+++.||+|.+..+.|.|..+-+ . .-.-.|...|+++..+-++.+++ +|.|.+.|
T Consensus 7 ~~~~v~~dlp-G~~~edI~v~v~~~~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~G-vL~I~~Pk 83 (83)
T cd06526 7 EKFQVTLDVK-GFKPEELKVKVSDNKLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLSSDG-VLTIEAPK 83 (83)
T ss_pred eeEEEEEECC-CCCHHHcEEEEECCEEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeCCCc-EEEEEecC
Confidence 5789999996 79999999999999999876411 1 11336888888888888888745 68998865
No 33
>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.
Probab=95.83 E-value=0.052 Score=37.72 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=52.4
Q ss_pred EeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----e--eccccCceecCccEEEEecCCeEEEEE
Q psy11204 24 WQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----F--QGKLLDVVHGDEIIWTLENNGTLLNIV 91 (161)
Q Consensus 24 ~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i--~g~L~~~V~~deStW~i~d~~~~l~I~ 91 (161)
..+.+.+.|.+.| +|+++.||.|++..+.|+|...-. .+ | .-.|...|+++.-+-++..++ .|.|+
T Consensus 6 ~e~~~~~~v~~dl-pG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dG-vL~I~ 83 (86)
T cd06497 6 RSDRDKFTIYLDV-KHFSPEDLTVKVLDDYVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAITCSLSADG-MLTFS 83 (86)
T ss_pred EEcCCEEEEEEEC-CCCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHeEEEeCCCC-EEEEE
Confidence 4578889999999 578999999999999999875310 12 2 236788889888899994333 58999
Q ss_pred EEe
Q psy11204 92 LPK 94 (161)
Q Consensus 92 L~K 94 (161)
|-|
T Consensus 84 ~PK 86 (86)
T cd06497 84 GPK 86 (86)
T ss_pred ecC
Confidence 876
No 34
>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ
Probab=95.78 E-value=0.059 Score=37.29 Aligned_cols=69 Identities=14% Similarity=0.203 Sum_probs=52.6
Q ss_pred eeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----e--eccccCceecCccEEEEecCCeEEEEEE
Q psy11204 25 QTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----F--QGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 25 Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i--~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
-+.+...|.+.| +|+++.||.|++..+.|+|..+-+ .+ | .-.|...|+++.-+-++..++ .|.|+|
T Consensus 4 ~~~~~~~v~~dl-pG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dG-vL~I~l 81 (84)
T cd06498 4 LEKDKFSVNLDV-KHFSPEELKVKVLGDFIEIHGKHEERQDEHGFISREFQRKYRIPADVDPLTITSSLSPDG-VLTVCG 81 (84)
T ss_pred eCCceEEEEEEC-CCCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHcEEEeCCCC-EEEEEE
Confidence 356788999999 689999999999999999876311 02 2 226788899999999996334 589999
Q ss_pred Eec
Q psy11204 93 PKA 95 (161)
Q Consensus 93 ~K~ 95 (161)
-|.
T Consensus 82 Pk~ 84 (84)
T cd06498 82 PRK 84 (84)
T ss_pred eCC
Confidence 773
No 35
>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6
Probab=95.78 E-value=0.17 Score=35.20 Aligned_cols=66 Identities=23% Similarity=0.125 Sum_probs=48.1
Q ss_pred Eee-CCEEEEEEEcCCCCCccceEEEEecCEEEEEeC------------------CeeeeeccccCceecCccEEEEecC
Q psy11204 24 WQT-LDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA------------------GKELFQGKLLDVVHGDEIIWTLENN 84 (161)
Q Consensus 24 ~Qt-~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk------------------g~~~i~g~L~~~V~~deStW~i~d~ 84 (161)
.++ .+...|.+.|| |+++.||.|.+..+.|+|... |.-.-.-.|...|+.+ ..+++++
T Consensus 6 ~e~~~~~~~v~~~lP-G~~kedi~v~~~~~~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A~~~~G 82 (90)
T cd06470 6 EKTGENNYRITLAVA-GFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GAELENG 82 (90)
T ss_pred EEcCCCeEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--eeEEeCC
Confidence 455 48999999996 799999999999999999842 1101122567777765 6788875
Q ss_pred CeEEEEEEEe
Q psy11204 85 GTLLNIVLPK 94 (161)
Q Consensus 85 ~~~l~I~L~K 94 (161)
- |.|+|.+
T Consensus 83 v--L~I~l~~ 90 (90)
T cd06470 83 L--LTIDLER 90 (90)
T ss_pred E--EEEEEEC
Confidence 5 7998864
No 36
>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat
Probab=95.64 E-value=0.091 Score=36.47 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=51.6
Q ss_pred EEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe-----e-e----e--eccccCceecCccEEEEecCCeEEE
Q psy11204 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK-----E-L----F--QGKLLDVVHGDEIIWTLENNGTLLN 89 (161)
Q Consensus 22 ~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~-----~-~----i--~g~L~~~V~~deStW~i~d~~~~l~ 89 (161)
.+..+.+.+.|++.| +|+++.+|+|++..+.|+|..+-+ . + | .-.|...|+++.-+-++..++ +|.
T Consensus 4 ~i~e~~~~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dG-vL~ 81 (86)
T cd06475 4 EIRQTADRWKVSLDV-NHFAPEELVVKTKDGVVEITGKHEEKQDEHGFVSRCFTRKYTLPPGVDPTAVTSSLSPDG-ILT 81 (86)
T ss_pred eEEEcCCeEEEEEEC-CCCCHHHEEEEEECCEEEEEEEECcCcCCCCEEEEEEEEEEECCCCCCHHHcEEEECCCC-eEE
Confidence 567899999999999 589999999999999999876411 0 2 2 125667777787788887334 477
Q ss_pred EEE
Q psy11204 90 IVL 92 (161)
Q Consensus 90 I~L 92 (161)
|+|
T Consensus 82 I~l 84 (86)
T cd06475 82 VEA 84 (86)
T ss_pred EEe
Confidence 776
No 37
>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.
Probab=95.58 E-value=0.065 Score=37.00 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=51.4
Q ss_pred eeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC-----Cee--ee--eccccCceecCccEEEE-ecCCeEEEEEEEe
Q psy11204 25 QTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA-----GKE--LF--QGKLLDVVHGDEIIWTL-ENNGTLLNIVLPK 94 (161)
Q Consensus 25 Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk-----g~~--~i--~g~L~~~V~~deStW~i-~d~~~~l~I~L~K 94 (161)
.+.+.+.|.+.|| ++++.||+|++..+.|+|... |.. -| .-.|...|+++.-+-++ .++ .|.|++.+
T Consensus 5 e~~~~~~v~~dlp-G~~pedi~V~v~~~~L~I~ger~~~~~~~~g~F~R~~~LP~~vd~e~v~A~l~~~G--vL~I~~~~ 81 (81)
T cd06479 5 TLGDTYQFAVDVS-DFSPEDIIVTTSNNQIEVHAEKLASDGTVMNTFTHKCQLPEDVDPTSVSSSLGEDG--TLTIKARR 81 (81)
T ss_pred CcCCeEEEEEECC-CCCHHHeEEEEECCEEEEEEEEeccCCCEEEEEEEEEECCCCcCHHHeEEEecCCC--EEEEEecC
Confidence 5678899999996 899999999999999998653 110 11 23688899999999998 654 47888753
No 38
>PRK10743 heat shock protein IbpA; Provisional
Probab=95.48 E-value=0.15 Score=38.60 Aligned_cols=73 Identities=16% Similarity=0.128 Sum_probs=55.7
Q ss_pred CCeEEEe-eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC------Ceee-----eec------cccCceecCccEEE
Q psy11204 19 PWGSWWQ-TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA------GKEL-----FQG------KLLDVVHGDEIIWT 80 (161)
Q Consensus 19 ~~Y~W~Q-t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk------g~~~-----i~g------~L~~~V~~deStW~ 80 (161)
|.+.-.+ +.+.+.|.+.|| |++++||.|.+..+.|+|... +..+ -.| .|...|+.+. -+
T Consensus 35 p~~di~ee~~~~~~v~aelP-Gv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~~--A~ 111 (137)
T PRK10743 35 PPYNVELVDENHYRIAIAVA-GFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRG--AN 111 (137)
T ss_pred CcEEEEEcCCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccCc--CE
Confidence 6788884 899999999996 899999999999999998753 1111 122 5667787773 77
Q ss_pred EecCCeEEEEEEEecc
Q psy11204 81 LENNGTLLNIVLPKAE 96 (161)
Q Consensus 81 i~d~~~~l~I~L~K~~ 96 (161)
+++| +|.|+|-|..
T Consensus 112 ~~dG--VL~I~lPK~~ 125 (137)
T PRK10743 112 LVNG--LLYIDLERVI 125 (137)
T ss_pred EeCC--EEEEEEeCCC
Confidence 7774 5899999963
No 39
>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.
Probab=95.25 E-value=0.12 Score=35.80 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=49.5
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC------eeeee------ccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG------KELFQ------GKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg------~~~i~------g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
..+...|.+.| +|+++.||+|++..+.|+|..+- ..+.. -.|...|+++.-+-++..++ .|.|+|-
T Consensus 5 ~~d~y~v~~dl-pG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dG-vL~I~~P 82 (83)
T cd06476 5 EDDKYQVFLDV-CHFTPDEITVRTVDNLLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDG-ILCIQAP 82 (83)
T ss_pred cCCeEEEEEEc-CCCCHHHeEEEEECCEEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCC-EEEEEec
Confidence 35667888988 57889999999999999986541 11222 25777888888899997344 5899885
Q ss_pred e
Q psy11204 94 K 94 (161)
Q Consensus 94 K 94 (161)
|
T Consensus 83 r 83 (83)
T cd06476 83 R 83 (83)
T ss_pred C
Confidence 4
No 40
>PRK11597 heat shock chaperone IbpB; Provisional
Probab=94.44 E-value=0.38 Score=36.70 Aligned_cols=75 Identities=20% Similarity=0.145 Sum_probs=55.2
Q ss_pred CCCCeEEEe-eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC------eee-----eec------cccCceecCccE
Q psy11204 17 PTPWGSWWQ-TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG------KEL-----FQG------KLLDVVHGDEII 78 (161)
Q Consensus 17 ~~~~Y~W~Q-t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg------~~~-----i~g------~L~~~V~~deSt 78 (161)
..|.+.=.+ +.+.+.|++.|| |++++||.|.+..+.|+|.... ..+ -.| .|...|+.+ .
T Consensus 31 ~~P~vdI~e~~~~~y~v~adlP-Gv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~--~ 107 (142)
T PRK11597 31 SFPPYNIEKSDDNHYRITLALA-GFRQEDLDIQLEGTRLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS--G 107 (142)
T ss_pred CCCcEEEEEcCCCEEEEEEEeC-CCCHHHeEEEEECCEEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC--c
Confidence 346677776 467899999995 8999999999999999987531 111 112 466777776 4
Q ss_pred EEEecCCeEEEEEEEecc
Q psy11204 79 WTLENNGTLLNIVLPKAE 96 (161)
Q Consensus 79 W~i~d~~~~l~I~L~K~~ 96 (161)
-++++| +|.|+|-|..
T Consensus 108 A~~~nG--VL~I~lPK~~ 123 (142)
T PRK11597 108 ATFVNG--LLHIDLIRNE 123 (142)
T ss_pred CEEcCC--EEEEEEeccC
Confidence 777874 5899999863
No 41
>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.
Probab=93.71 E-value=0.44 Score=33.33 Aligned_cols=64 Identities=11% Similarity=0.182 Sum_probs=48.3
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC--------Ce-eeee------ccccCceecCccEEEEecCCeEEEE
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA--------GK-ELFQ------GKLLDVVHGDEIIWTLENNGTLLNI 90 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk--------g~-~~i~------g~L~~~V~~deStW~i~d~~~~l~I 90 (161)
..+.+.|++.|| |+++.||.|++..+.|+|... +. .... -.|...|+.+.-+-++.+++ .|.|
T Consensus 6 ~~~~~~v~adlP-G~~kedI~V~v~~~~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~-~l~i 83 (87)
T cd06482 6 DSSNVLASVDVC-GFEPDQVKVKVKDGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGS-VVKI 83 (87)
T ss_pred cCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCC-EEEE
Confidence 457889999996 899999999999999998763 11 1112 26777888888889998876 4555
Q ss_pred E
Q psy11204 91 V 91 (161)
Q Consensus 91 ~ 91 (161)
.
T Consensus 84 ~ 84 (87)
T cd06482 84 E 84 (87)
T ss_pred e
Confidence 3
No 42
>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.
Probab=93.48 E-value=0.5 Score=32.80 Aligned_cols=64 Identities=14% Similarity=0.271 Sum_probs=46.1
Q ss_pred CCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC------e--e--e----e--eccccCceecCccEEEEecCCeEEEE
Q psy11204 27 LDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG------K--E--L----F--QGKLLDVVHGDEIIWTLENNGTLLNI 90 (161)
Q Consensus 27 ~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg------~--~--~----i--~g~L~~~V~~deStW~i~d~~~~l~I 90 (161)
.+.+.|.+.| ++++++||.|++..+.|.|..+- . . . | .-.|...|+.+.-+-++..++ +|.|
T Consensus 6 ~d~~~v~~dl-pG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dG-vL~I 83 (87)
T cd06481 6 KEGFSLKLDV-RGFSPEDLSVRVDGRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSG-HLHI 83 (87)
T ss_pred cceEEEEEEC-CCCChHHeEEEEECCEEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCc-eEEE
Confidence 4678899988 57889999999999999986530 0 0 1 1 225777888888888883334 4777
Q ss_pred EE
Q psy11204 91 VL 92 (161)
Q Consensus 91 ~L 92 (161)
.+
T Consensus 84 ~~ 85 (87)
T cd06481 84 RA 85 (87)
T ss_pred Ec
Confidence 65
No 43
>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).
Probab=92.15 E-value=1.1 Score=31.02 Aligned_cols=64 Identities=17% Similarity=0.106 Sum_probs=46.0
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC------eeeee------ccccCceecCccEEEEecCCeEEEEE
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG------KELFQ------GKLLDVVHGDEIIWTLENNGTLLNIV 91 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg------~~~i~------g~L~~~V~~deStW~i~d~~~~l~I~ 91 (161)
+.+...|.+.| +|+++.||+|++..+.|+|...- ..++. -.|...|+++.-+-++..++ +|.|.
T Consensus 5 ~~~~~~v~~dl-pG~~~edI~V~v~~~~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dG-vL~I~ 80 (83)
T cd06477 5 GKPMFQILLDV-VQFRPEDIIIQVFEGWLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHDG-ILVVE 80 (83)
T ss_pred CCceEEEEEEc-CCCCHHHeEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCCC-EEEEE
Confidence 56778899999 57899999999999999997631 11222 25777888888888874344 45654
No 44
>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis [].
Probab=90.92 E-value=2.2 Score=33.86 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=47.8
Q ss_pred EeeCC-EEEEEEEcCCCCCccc-eEEEEec--CEEEEEeCCeeeeeccccCceecCccEEEEecCCeEEEEEEEeccC
Q psy11204 24 WQTLD-EVFIEVILTDKVRSRD-IAIKCTN--TEISCTIAGKELFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 24 ~Qt~~-eV~I~I~lp~~~~~kd-v~V~i~~--~~L~V~vkg~~~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~ 97 (161)
.+..+ ++.|...|| +++..+ |.|.|.. ..|++.+.++.+=.-.|..+ .++--.|++..+ +|+|.|.+.+.
T Consensus 97 re~dDge~~VvAdLP-GVs~dd~idV~l~~d~~~L~i~~~~~~~krv~L~~~-~~e~~~~t~nNg--ILEIri~~~~~ 170 (177)
T PF05455_consen 97 RERDDGELVVVADLP-GVSDDDAIDVTLDDDEGALTIRVGEKYLKRVALPWP-DPEITSATFNNG--ILEIRIRRTEE 170 (177)
T ss_pred EecCCCcEEEEEeCC-CCCcccceeeEeecCCceEEEecCCceEeeEecCCC-ccceeeEEEeCc--eEEEEEeecCC
Confidence 34556 799999995 566666 8888874 56666665554444466666 355557888753 68999999885
No 45
>KOG2265|consensus
Probab=87.16 E-value=0.26 Score=39.03 Aligned_cols=26 Identities=12% Similarity=-0.078 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCCCCCccCCccCCC
Q psy11204 126 KKKMDLEKFQIENPGFDFSRAKLAKC 151 (161)
Q Consensus 126 ~~~~~l~~~~~~~p~~Dfs~a~~~g~ 151 (161)
+..++++++|+.+|+|+|+.+.++++
T Consensus 123 kl~dldeEtra~vekmmfdq~qk~~~ 148 (179)
T KOG2265|consen 123 KLSDLDEETRATVEKMMFDQRQKSMG 148 (179)
T ss_pred hhhhccHHHHHhhhccchhHHHhhcC
Confidence 56689999999999999999999998
No 46
>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21.6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.
Probab=85.49 E-value=5 Score=28.28 Aligned_cols=65 Identities=14% Similarity=0.163 Sum_probs=45.8
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC-----Cee-eeec------cccCceecCccEEEEecCCeEEEEEE
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA-----GKE-LFQG------KLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk-----g~~-~i~g------~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
+.+.-.|.+.+ .+.+..||.|++..+.|.|.-+ ++. ++.+ .|...|+++.-+-.+..++ +|.|.+
T Consensus 13 ~~~~f~v~ldv-~gF~pEDL~Vkv~~~~L~V~Gkh~~~~~e~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dG-vL~Iea 89 (91)
T cd06480 13 SSEPWKVCVNV-HSFKPEELTVKTKDGFVEVSGKHEEQQKEGGIVSKNFTKKIQLPPEVDPVTVFASLSPEG-LLIIEA 89 (91)
T ss_pred CCCcEEEEEEe-CCCCHHHcEEEEECCEEEEEEEECcccCCCCEEEEEEEEEEECCCCCCchhEEEEeCCCC-eEEEEc
Confidence 34445677777 7899999999999999999654 111 3222 5777788888888888555 567754
No 47
>COG3354 FlaG Putative archaeal flagellar protein G [Cell motility and secretion]
Probab=65.04 E-value=30 Score=26.77 Aligned_cols=70 Identities=11% Similarity=-0.003 Sum_probs=46.6
Q ss_pred CeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccccCceecCccEEEEecCCeEE-EEEEEecc
Q psy11204 20 WGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLENNGTLL-NIVLPKAE 96 (161)
Q Consensus 20 ~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L~~~V~~deStW~i~d~~~~l-~I~L~K~~ 96 (161)
.|.-+-.....+++| |+|- +..+-+++++++|-+.|+ +..+.--.-+.++.+.|++.++. .. +|.+--+.
T Consensus 62 ~~~~~~g~~t~t~yi---KNtG--~~~~~fd~~sitVliDG~-iv~~a~~~~~~~~gs~i~l~PG~-Vg~ev~vn~~l 132 (154)
T COG3354 62 PYVGTDGPYTYTFYI---KNTG--SDSIAFDNTSITVLIDGN-IVTPAYVTFTSVNGSSIRLSPGQ-VGREVTVNEAL 132 (154)
T ss_pred ccccCCCceEEEEEE---ecCC--CcccccCCCeEEEEEcCc-EeccceEEEEecCCCeeEecCCc-eeeEEEeccCC
Confidence 445555555667776 4442 345689999999999885 44444555677899999988876 43 55554443
No 48
>PF11069 DUF2870: Protein of unknown function (DUF2870); InterPro: IPR021298 This is a eukaryotic family of proteins with unknown function.
Probab=63.70 E-value=17 Score=26.15 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=27.5
Q ss_pred EEEEEEEeccCcccccccccceeccccCCCCCccchHHHHHHHHHHHHHH
Q psy11204 87 LLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMKKKMDLEKFQI 136 (161)
Q Consensus 87 ~l~I~L~K~~~~~~~~~W~~L~~~~~G~~~iD~~~~de~~~~~~l~~~~~ 136 (161)
-|+|.|.|... |-|.-.|..++|+++++|+.-|+.
T Consensus 28 KiivKl~~~g~---------------g~P~REp~isee~qk~mm~~~~rr 62 (98)
T PF11069_consen 28 KIIVKLQKRGQ---------------GPPPREPVISEEEQKAMMAYYYRR 62 (98)
T ss_pred eEEEEeccCCC---------------CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 37899998874 888888888888888887766654
No 49
>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=53.74 E-value=42 Score=21.73 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=29.8
Q ss_pred eeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC
Q psy11204 25 QTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA 59 (161)
Q Consensus 25 Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk 59 (161)
.......-+|+||.++....++..+...-|.|.+.
T Consensus 53 ~~~~~f~r~~~LP~~vd~~~i~a~~~~G~L~I~~p 87 (88)
T cd06464 53 RSYGSFSRSFRLPEDVDPDKIKASLENGVLTITLP 87 (88)
T ss_pred EeCcEEEEEEECCCCcCHHHcEEEEeCCEEEEEEc
Confidence 34567888999999999999999999999988763
No 50
>KOG3591|consensus
Probab=48.57 E-value=1.2e+02 Score=23.71 Aligned_cols=66 Identities=17% Similarity=0.257 Sum_probs=48.3
Q ss_pred EEEEEEcCCCCCccceEEEEecCEEEEEeC--------Cee---ee-eccccCceecCccEEEEecCCeEEEEEEEeccC
Q psy11204 30 VFIEVILTDKVRSRDIAIKCTNTEISCTIA--------GKE---LF-QGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 30 V~I~I~lp~~~~~kdv~V~i~~~~L~V~vk--------g~~---~i-~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~~ 97 (161)
..|.+.| ...+..+|.|+...+.|.|.-+ |.. +. .-.|...|+++.-+=+|..++ .|.|.-.|...
T Consensus 74 F~V~lDV-~~F~PeEl~Vk~~~~~l~V~gkHeer~d~~G~v~R~F~R~y~LP~~vdp~~V~S~LS~dG-vLtI~ap~~~~ 151 (173)
T KOG3591|consen 74 FEVNLDV-HQFKPEELKVKTDDNTLEVEGKHEEKEDEHGYVSRSFVRKYLLPEDVDPTSVTSTLSSDG-VLTIEAPKPPP 151 (173)
T ss_pred EEEEEEc-ccCcccceEEEeCCCEEEEEeeeccccCCCCeEEEEEEEEecCCCCCChhheEEeeCCCc-eEEEEccCCCC
Confidence 4455555 4578889999999998888765 111 11 237899999998888898777 67888877663
No 51
>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind
Probab=47.10 E-value=56 Score=20.04 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=25.4
Q ss_pred CCEEEEEEEcCCCCCccceEEEEecCEEEEEe
Q psy11204 27 LDEVFIEVILTDKVRSRDIAIKCTNTEISCTI 58 (161)
Q Consensus 27 ~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~v 58 (161)
.......+.||..+....+...+....|.|.+
T Consensus 47 ~~~~~~~~~L~~~i~~~~~~~~~~~~~l~i~l 78 (80)
T cd00298 47 YGEFERSFELPEDVDPEKSKASLENGVLEITL 78 (80)
T ss_pred eeeEEEEEECCCCcCHHHCEEEEECCEEEEEE
Confidence 35567788888888888888888888888765
No 52
>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry.; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....
Probab=39.60 E-value=57 Score=22.21 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=26.0
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA 59 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk 59 (161)
+.....-+|.||.++....+...+...-|+|.+.
T Consensus 53 ~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~~p 86 (102)
T PF00011_consen 53 RYGSFERSIRLPEDVDPDKIKASYENGVLTITIP 86 (102)
T ss_dssp -SEEEEEEEE-STTB-GGG-EEEETTSEEEEEEE
T ss_pred ccceEEEEEcCCCcCCcceEEEEecCCEEEEEEE
Confidence 4456777999999999999999999999999874
No 53
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=39.27 E-value=67 Score=21.39 Aligned_cols=32 Identities=9% Similarity=0.087 Sum_probs=27.3
Q ss_pred CEEEEEEEcCCCCCccceEEEEec-CEEEEEeC
Q psy11204 28 DEVFIEVILTDKVRSRDIAIKCTN-TEISCTIA 59 (161)
Q Consensus 28 ~eV~I~I~lp~~~~~kdv~V~i~~-~~L~V~vk 59 (161)
....-+|.||.++....+...++. .-|+|.+.
T Consensus 50 ~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~P 82 (83)
T cd06526 50 REFTRRYQLPEGVDPDSVTSSLSSDGVLTIEAP 82 (83)
T ss_pred EEEEEEEECCCCCChHHeEEEeCCCcEEEEEec
Confidence 467778999999999999999998 88888763
No 54
>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.
Probab=34.43 E-value=57 Score=22.23 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=26.1
Q ss_pred EEEEEEEcCCCCCccceEEEE-ecCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDIAIKC-TNTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv~V~i-~~~~L~V~vk 59 (161)
+..=+|.||.++....++..+ ...-|+|.+.
T Consensus 54 ef~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~P 85 (86)
T cd06497 54 EFHRRYRLPSNVDQSAITCSLSADGMLTFSGP 85 (86)
T ss_pred EEEEEEECCCCCChHHeEEEeCCCCEEEEEec
Confidence 367789999999999999999 6788888763
No 55
>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).
Probab=33.23 E-value=82 Score=21.51 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=26.4
Q ss_pred EEEEEEEcCCCCCccceEEEE-ecCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDIAIKC-TNTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv~V~i-~~~~L~V~vk 59 (161)
...-+|.||.++....|+-.+ ...-|+|..+
T Consensus 51 ~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~~~ 82 (83)
T cd06477 51 SFTRQYQLPDGVEHKDLSAMLCHDGILVVETK 82 (83)
T ss_pred EEEEEEECCCCcchheEEEEEcCCCEEEEEec
Confidence 677789999999999999998 6778888764
No 56
>PF12100 DUF3576: Domain of unknown function (DUF3576); InterPro: IPR021959 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 100 amino acids in length. This domain has a single completely conserved residue G that may be functionally important.
Probab=33.11 E-value=71 Score=23.20 Aligned_cols=36 Identities=19% Similarity=0.490 Sum_probs=25.0
Q ss_pred cccCCccccCCCCeEEEeeCC------EEEEEEEcCCCCCccceEEEE
Q psy11204 8 DEKGGVVKCPTPWGSWWQTLD------EVFIEVILTDKVRSRDIAIKC 49 (161)
Q Consensus 8 ~~~~~~~~~~~~~Y~W~Qt~~------eV~I~I~lp~~~~~kdv~V~i 49 (161)
+--+|+|-. .|+++.. .++|+| +.+..++..|+|.+
T Consensus 25 D~~gGVI~T-----dWY~~p~~~~er~k~tv~I-ld~~Lradal~V~v 66 (103)
T PF12100_consen 25 DPFGGVIVT-----DWYSPPPGPNERFKATVYI-LDRALRADALRVSV 66 (103)
T ss_pred CCCCCEEEe-----ccccCCCCCCeeEEEEEEE-ECccccCCceEEEE
Confidence 556788887 7887743 366776 55666777777766
No 57
>PF13349 DUF4097: Domain of unknown function (DUF4097)
Probab=29.70 E-value=87 Score=23.00 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=21.6
Q ss_pred CCEEEEEEEcCCCCCccceEEEEecCEEEE
Q psy11204 27 LDEVFIEVILTDKVRSRDIAIKCTNTEISC 56 (161)
Q Consensus 27 ~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V 56 (161)
.....|+|.||++.+-+++++......+.+
T Consensus 117 ~~~~~i~I~lP~~~~l~~i~i~~~~G~i~i 146 (166)
T PF13349_consen 117 DNKSKITIYLPKDYKLDKIDIKTSSGDITI 146 (166)
T ss_pred CCCcEEEEEECCCCceeEEEEEeccccEEE
Confidence 456677777888776677777777777765
No 58
>COG1470 Predicted membrane protein [Function unknown]
Probab=26.48 E-value=88 Score=28.72 Aligned_cols=25 Identities=16% Similarity=0.229 Sum_probs=19.6
Q ss_pred CCEEEEEEEcCCCCCccceEEEEec
Q psy11204 27 LDEVFIEVILTDKVRSRDIAIKCTN 51 (161)
Q Consensus 27 ~~eV~I~I~lp~~~~~kdv~V~i~~ 51 (161)
...|.++|.+|+++.+-|..|.|+.
T Consensus 443 ~~tV~ltI~vP~~a~aGdY~i~i~~ 467 (513)
T COG1470 443 SKTVSLTITVPEDAGAGDYRITITA 467 (513)
T ss_pred cceEEEEEEcCCCCCCCcEEEEEEE
Confidence 3468888888888888888888764
No 59
>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st
Probab=26.33 E-value=1.4e+02 Score=20.07 Aligned_cols=32 Identities=9% Similarity=0.161 Sum_probs=27.0
Q ss_pred CEEEEEEEcCCCCCccceEEEEecCEEEEEeC
Q psy11204 28 DEVFIEVILTDKVRSRDIAIKCTNTEISCTIA 59 (161)
Q Consensus 28 ~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk 59 (161)
....-+|+||.++..+.++..+...-|+|.+.
T Consensus 60 g~f~r~i~LP~~v~~~~i~A~~~nGvL~I~lP 91 (92)
T cd06472 60 GRFVRRFRLPENADADEVKAFLENGVLTVTVP 91 (92)
T ss_pred cEEEEEEECCCCCCHHHCEEEEECCEEEEEec
Confidence 36677889999999999999999988888763
No 60
>COG4703 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.83 E-value=58 Score=22.09 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=22.2
Q ss_pred CCCCCCcccCCccccCCCCeEEEeeCCEEEEEE
Q psy11204 2 PKLSHFDEKGGVVKCPTPWGSWWQTLDEVFIEV 34 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~Y~W~Qt~~eV~I~I 34 (161)
||+.++.||-|++-| ..+++|..+.-++++
T Consensus 21 ~k~~rnFEr~G~vv~---eV~ys~~~e~F~lr~ 50 (74)
T COG4703 21 EKRQRNFERNGEVVC---EVKYSEDNETFELRD 50 (74)
T ss_pred chhhhhhhcCCEEEE---EEEecCCCceEEEEE
Confidence 577778899999999 456777777555554
Done!