Query psy11204
Match_columns 161
No_of_seqs 157 out of 686
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:49:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rh0_A NUDC domain-containing 100.0 1E-49 3.4E-54 307.0 14.8 147 6-157 1-148 (157)
2 3qor_A Nuclear migration prote 99.9 2.2E-27 7.4E-32 175.0 12.0 99 16-121 14-115 (121)
3 1wfi_A Nuclear distribution ge 99.9 4.7E-26 1.6E-30 169.5 12.1 99 16-121 5-106 (131)
4 2o30_A Nuclear movement protei 99.9 3.5E-26 1.2E-30 170.4 11.4 100 17-125 3-102 (131)
5 1wgv_A KIAA1068 protein; CS do 99.9 2.4E-25 8.3E-30 164.4 12.7 98 16-121 17-119 (124)
6 1rl1_A Suppressor of G2 allele 99.8 5.5E-21 1.9E-25 138.2 9.5 97 17-123 8-108 (114)
7 2xcm_C SGT1-like protein, cyto 99.8 1.6E-19 5.6E-24 125.4 10.7 85 18-109 2-90 (92)
8 1ejf_A Progesterone receptor P 99.8 9.4E-19 3.2E-23 129.2 10.3 88 19-117 4-96 (125)
9 1x5m_A Calcyclin-binding prote 99.8 4.2E-18 1.4E-22 125.9 10.2 86 18-109 20-113 (127)
10 1wh0_A Ubiquitin carboxyl-term 99.7 2.6E-17 8.9E-22 123.3 10.4 95 8-109 9-120 (134)
11 2kmw_A Uncharacterized protein 99.6 5.6E-16 1.9E-20 118.0 9.5 86 18-116 4-94 (150)
12 2cg9_X CO-chaperone protein SB 99.6 8.6E-17 2.9E-21 120.2 3.6 92 17-117 5-113 (134)
13 2k8q_A Protein SHQ1; beta-sand 98.1 1.2E-05 4.2E-10 59.8 8.9 84 18-107 3-90 (134)
14 4fei_A Heat shock protein-rela 98.0 7.7E-05 2.6E-09 52.2 10.8 77 18-97 6-96 (102)
15 3eud_A Protein SHQ1; CS domain 97.9 0.00011 3.7E-09 53.2 10.0 84 16-106 15-103 (115)
16 3gla_A Low molecular weight he 97.9 0.00022 7.5E-09 49.3 10.5 76 18-96 4-98 (100)
17 3aab_A Putative uncharacterize 97.6 0.0009 3.1E-08 48.1 10.5 78 17-97 23-117 (123)
18 1gme_A Heat shock protein 16.9 97.4 0.0016 5.5E-08 48.6 10.2 78 17-97 42-139 (151)
19 4eld_A MJ16.5-P1, small heat s 97.3 0.002 6.8E-08 48.4 10.2 74 21-97 59-152 (161)
20 2wj5_A Heat shock protein beta 97.2 0.0016 5.5E-08 45.4 7.7 74 21-97 4-90 (101)
21 3l1e_A Alpha-crystallin A chai 97.1 0.0079 2.7E-07 42.2 10.8 74 21-97 5-91 (106)
22 3q9p_A Heat shock protein beta 97.1 0.0045 1.5E-07 41.8 8.7 70 24-95 3-84 (85)
23 2y1y_A Alpha-crystallin B chai 96.9 0.004 1.4E-07 42.4 7.3 70 25-97 3-85 (90)
24 2klr_A Alpha-crystallin B chai 96.2 0.018 6.1E-07 44.1 7.8 74 21-97 66-152 (175)
25 2bol_A TSP36, small heat shock 95.6 0.073 2.5E-06 44.3 9.6 77 19-97 99-190 (314)
26 2bol_A TSP36, small heat shock 90.3 1.2 4E-05 37.0 8.2 66 28-95 233-313 (314)
27 3gla_A Low molecular weight he 38.9 40 0.0014 22.1 4.1 31 29-59 65-95 (100)
28 3q9p_A Heat shock protein beta 36.8 45 0.0015 21.5 4.0 31 29-59 51-82 (85)
29 1tvf_A PBP4, penicillin bindin 34.8 44 0.0015 27.9 4.5 44 27-73 322-365 (369)
30 3vwc_A Serine protease inhibit 33.7 81 0.0028 23.3 5.3 47 36-82 36-87 (149)
31 1p3q_Q VPS9P, vacuolar protein 33.2 37 0.0013 20.8 2.9 16 127-142 12-27 (54)
32 2y1y_A Alpha-crystallin B chai 32.2 49 0.0017 21.4 3.6 30 30-59 51-81 (90)
33 4fei_A Heat shock protein-rela 32.2 57 0.002 21.6 4.0 31 29-59 62-92 (102)
34 2wj5_A Heat shock protein beta 30.6 57 0.002 21.7 3.8 30 30-59 56-86 (101)
35 3l1e_A Alpha-crystallin A chai 29.0 60 0.002 21.8 3.7 30 30-59 57-87 (106)
36 1n91_A ORF, hypothetical prote 28.7 96 0.0033 21.5 4.8 62 22-84 7-75 (108)
37 1g31_A GP31; chaperone, CO-cha 27.2 6.4 0.00022 27.9 -1.6 10 150-159 74-83 (111)
38 2fyg_A Replicase polyprotein 1 26.6 12 0.0004 26.9 -0.4 25 131-157 72-97 (128)
39 3r24_B Non-structural protein 24.1 14 0.00048 27.2 -0.4 25 131-157 79-104 (155)
40 3sjr_A Uncharacterized protein 23.3 31 0.0011 26.0 1.4 15 130-144 104-118 (175)
41 3hun_A Penicillin-binding prot 22.8 80 0.0027 27.3 4.1 40 26-68 357-396 (453)
42 1gme_A Heat shock protein 16.9 22.6 1E+02 0.0034 22.1 4.1 31 29-59 105-135 (151)
43 3aab_A Putative uncharacterize 21.3 2E+02 0.0068 19.5 5.4 31 29-59 82-113 (123)
No 1
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=100.00 E-value=1e-49 Score=307.01 Aligned_cols=147 Identities=43% Similarity=0.809 Sum_probs=127.1
Q ss_pred CCcccCCccccCCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccccCceecCccEEEEecCC
Q psy11204 6 HFDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLENNG 85 (161)
Q Consensus 6 ~~~~~~~~~~~~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L~~~V~~deStW~i~d~~ 85 (161)
||+||+|+++|.+++|.|+||.++|+|+|+||++++++||.|+|++++|+|+++|+++++|+||++|++++|+|++++++
T Consensus 1 ~~~~r~~~~~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg~~~l~g~L~~~I~~eeS~w~i~~~k 80 (157)
T 2rh0_A 1 GFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKGKLFDSTIADEGTWTLEDRK 80 (157)
T ss_dssp -CGGGTTCCCEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETTEEEEEEEBSSCBCGGGCEEEEECCC
T ss_pred ChhhccCcccCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECCEEEEeeccccccCccccEEEEcCCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred eEEEEEEEeccCcccccccccceeccccCCCCCccchHHHHHHHHHHHHHHhCCCCCccCCccCCCcC-CCCC
Q psy11204 86 TLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMKKKMDLEKFQIENPGFDFSRAKLAKCYD-KVQD 157 (161)
Q Consensus 86 ~~l~I~L~K~~~~~~~~~W~~L~~~~~G~~~iD~~~~de~~~~~~l~~~~~~~p~~Dfs~a~~~g~~~-~~~~ 157 (161)
.|+|+|.|++.. .+.||++|++ |++++|++++||++++++|++||++|||||||+|+|||||. +.||
T Consensus 81 -~v~I~L~K~~~~-~~~~W~~L~k---~~~~lD~~t~d~~~k~~~L~~f~~~~p~~Dfs~a~~~g~~~~g~p~ 148 (157)
T 2rh0_A 81 -MVRIVLTKTKRD-AANCWTSLLE---SEYAADPWVQDQMQRKLTLERFQKENPGFDFSGAEISGNYTKGGPD 148 (157)
T ss_dssp -EEEEEEEBSSCS-TTCCCSEEET---TEEECCHHHHHHHHHHHHHHHHHHHCTTSCCC--------------
T ss_pred -EEEEEEEEcCCC-cCCcChhhhc---CCCCCChHHHHHHHHHHHHHHHHHHCCCCCchhhhhcCCCCCCCCC
Confidence 689999999851 1379999999 99999999999999999999999999999999999999996 4776
No 2
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.95 E-value=2.2e-27 Score=174.99 Aligned_cols=99 Identities=18% Similarity=0.387 Sum_probs=91.5
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCC--CCccceEEEEecCEEEEEeCCee-eeeccccCceecCccEEEEecCCeEEEEEE
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDK--VRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~--~~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
+..++|+|+||.++|+|+|+||++ ++++||.|.|++++|+|+++|++ +++|+||++|++++|+|++++++ .|+|+|
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~~~g~L~~~I~~deS~w~i~~~~-~i~i~L 92 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIADGA-VVTVHL 92 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTSCCSEEEEBSSCBCGGGCEEEEETTT-EEEEEE
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCcceEEeccccccccccccEEEEcCCC-EEEEEE
Confidence 467899999999999999999998 99999999999999999999985 99999999999999999999874 589999
Q ss_pred EeccCcccccccccceeccccCCCCCccc
Q psy11204 93 PKAEFKGKEQIWNSLFVNSKENYATDPTI 121 (161)
Q Consensus 93 ~K~~~~~~~~~W~~L~~~~~G~~~iD~~~ 121 (161)
.|++. +.||++|++ |+++||...
T Consensus 93 ~K~~~---~~~W~~L~~---~~~~id~~k 115 (121)
T 3qor_A 93 EKINK---MEWWSRLVS---SDPEINTKK 115 (121)
T ss_dssp EBSSS---SCCCSCSBT---TSCCBCGGG
T ss_pred EECCC---CCCChhhhc---CCCCCccce
Confidence 99986 379999999 999999643
No 3
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.93 E-value=4.7e-26 Score=169.52 Aligned_cols=99 Identities=20% Similarity=0.402 Sum_probs=91.4
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCC--CCccceEEEEecCEEEEEeCCee-eeeccccCceecCccEEEEecCCeEEEEEE
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDK--VRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~--~~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
|.+++|.|+||.++|+|+|+||++ ++++|+.|+|++++|+|+++|++ +++|+||++|++++|+|++++++ .|+|+|
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~~~~~L~~~I~~e~s~w~i~~~k-~v~i~L 83 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGK-VVTVHL 83 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSCCSBCSCBSSCBCSTTCEEEEETTT-EEEEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCceEEEecccccccccccCEEEEcCCC-EEEEEE
Confidence 567899999999999999999998 99999999999999999999985 99999999999999999999875 689999
Q ss_pred EeccCcccccccccceeccccCCCCCccc
Q psy11204 93 PKAEFKGKEQIWNSLFVNSKENYATDPTI 121 (161)
Q Consensus 93 ~K~~~~~~~~~W~~L~~~~~G~~~iD~~~ 121 (161)
.|++. +.||++|++ |++++|...
T Consensus 84 ~K~~~---~~~W~~L~~---~~~~id~~k 106 (131)
T 1wfi_A 84 EKINK---MEWWNRLVT---SDPEINTKK 106 (131)
T ss_dssp EBSSS---CCCCSCSBS---SCCSCCCSS
T ss_pred EECCC---CCCChhhhc---CCCCCCccE
Confidence 99986 379999999 999998543
No 4
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.93 E-value=3.5e-26 Score=170.43 Aligned_cols=100 Identities=23% Similarity=0.405 Sum_probs=78.6
Q ss_pred CCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccccCceecCccEEEEecCCeEEEEEEEecc
Q psy11204 17 PTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAE 96 (161)
Q Consensus 17 ~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L~~~V~~deStW~i~d~~~~l~I~L~K~~ 96 (161)
.+++|.|+||.++|+|+|+||++++++++.|.|++++|+|+++|+++++|+||++|++++|+|++++++ |+|+|.|+.
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g~~~~~~~L~~~I~~e~S~w~i~~~k--v~i~L~K~~ 80 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQGEIVIDGELLHEVDVSSLWWVINGDV--VDVNVTKKR 80 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETTEEEEEEEBSSCEEEEEEEEEEETTE--EEEEEEESS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECCEeeEccccccccccccCEEEEeCCE--EEEEEEECC
Confidence 368999999999999999999999999999999999999999998899999999999999999999977 899999994
Q ss_pred CcccccccccceeccccCCCCCccchHHH
Q psy11204 97 FKGKEQIWNSLFVNSKENYATDPTIFHEM 125 (161)
Q Consensus 97 ~~~~~~~W~~L~~~~~G~~~iD~~~~de~ 125 (161)
+.||++|++ |+++||+...+.+
T Consensus 81 ----~~~W~~L~~---~~~~id~~k~~~e 102 (131)
T 2o30_A 81 ----NEWWDSLLV---GSESVDVQKLAEN 102 (131)
T ss_dssp ----CCCCSCSBC----------------
T ss_pred ----CCCCccccC---CCCCCCHhHcCcc
Confidence 379999999 9999987654433
No 5
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.93 E-value=2.4e-25 Score=164.36 Aligned_cols=98 Identities=18% Similarity=0.380 Sum_probs=89.5
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCCC-CccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEE
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDKV-RSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNI 90 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~~-~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I 90 (161)
+.+++|.|+||.++|+|+|+||+++ +++|+.|+|++++|+|+++ |.+ +++|+||++|++++|+|++++++ .|+|
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k-~v~i 95 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGK-CVLV 95 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTS-EEEE
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCC-EEEE
Confidence 4568999999999999999999998 9999999999999999994 665 99999999999999999999876 6899
Q ss_pred EEEeccCcccccccccceeccccCCCCCccc
Q psy11204 91 VLPKAEFKGKEQIWNSLFVNSKENYATDPTI 121 (161)
Q Consensus 91 ~L~K~~~~~~~~~W~~L~~~~~G~~~iD~~~ 121 (161)
+|.|++. .||++|++ |+++||+..
T Consensus 96 ~L~K~~~----~~W~~L~~---~~~~id~~k 119 (124)
T 1wgv_A 96 NLSKVGE----YWWNAILE---GEEPIDIDS 119 (124)
T ss_dssp EECBSSS----CCCSCSBT---TSCCCSCCC
T ss_pred EEEECCC----CCCcCccc---CCCccChhh
Confidence 9999974 79999999 999999653
No 6
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.84 E-value=5.5e-21 Score=138.24 Aligned_cols=97 Identities=21% Similarity=0.379 Sum_probs=80.6
Q ss_pred CCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEE
Q psy11204 17 PTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 17 ~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
..++|.|+||.++|+|+|.+| +++++++.|.|++++|+|.++ |.. .++++||++|++++|+|++.+++ |+|+|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~-~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~--l~i~L 84 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIK-NVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTK--IEIKL 84 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCC-SCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSS--EEEEE
T ss_pred CCCCccEEeCCCEEEEEEEeC-CCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCE--EEEEE
Confidence 456899999999999999998 788999999999999999986 445 79999999999999999999977 89999
Q ss_pred EeccCcccccccccceeccccCCCCCccchH
Q psy11204 93 PKAEFKGKEQIWNSLFVNSKENYATDPTIFH 123 (161)
Q Consensus 93 ~K~~~~~~~~~W~~L~~~~~G~~~iD~~~~d 123 (161)
.|++. .||++|.+ ++++||+...+
T Consensus 85 ~K~~~----~~W~~L~~---~~~~~~~~~i~ 108 (114)
T 1rl1_A 85 KKPEA----VRWEKLEG---QGDVPTPKQFV 108 (114)
T ss_dssp ECSSC----CCCSSSBT---TC---------
T ss_pred EcCCC----CcCccccc---cCCccCCcccC
Confidence 99986 49999999 99999976544
No 7
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.81 E-value=1.6e-19 Score=125.36 Aligned_cols=85 Identities=20% Similarity=0.324 Sum_probs=77.0
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC---ee-eeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG---KE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg---~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
.++|.|+||.++|+|+|.+| ++.++++.|.|++++|+|.+++ .. .++++||++|++++|+|++.+++ |+|+|.
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~-~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~--l~i~L~ 78 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAK-GIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTK--IEICLA 78 (92)
T ss_dssp CSEEEEEEETTEEEEEEECC-SCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSC--EEEEEE
T ss_pred CccccEEeCCCEEEEEEEEC-CCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCE--EEEEEE
Confidence 36899999999999999985 7889999999999999999874 34 78999999999999999999877 899999
Q ss_pred eccCccccccccccee
Q psy11204 94 KAEFKGKEQIWNSLFV 109 (161)
Q Consensus 94 K~~~~~~~~~W~~L~~ 109 (161)
|++. .||++|.+
T Consensus 79 K~~~----~~W~~L~~ 90 (92)
T 2xcm_C 79 KADI----ITWASLEH 90 (92)
T ss_dssp BSSS----CCCSCSBT
T ss_pred cCCC----Ccchhccc
Confidence 9986 49999975
No 8
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.78 E-value=9.4e-19 Score=129.18 Aligned_cols=88 Identities=20% Similarity=0.331 Sum_probs=78.7
Q ss_pred CCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC----Cee-eeeccccCceecCccEEEEecCCeEEEEEEE
Q psy11204 19 PWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA----GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 19 ~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk----g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L~ 93 (161)
|.|.|+||.+.|+|+|.+|. ++++.|+|++++|+|++. |.. .++++||++|++++|+|++.+++ |+|+|.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~---~~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~k--iei~L~ 78 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVED---SKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRS--ILCCLR 78 (125)
T ss_dssp CCEEEEECSSEEEEEECCTT---EEEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSC--EEEEEE
T ss_pred CceeEEeCCCEEEEEEEecC---CCceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCE--EEEEEE
Confidence 38999999999999999987 589999999999999864 465 89999999999999999999866 899999
Q ss_pred eccCcccccccccceeccccCCCC
Q psy11204 94 KAEFKGKEQIWNSLFVNSKENYAT 117 (161)
Q Consensus 94 K~~~~~~~~~W~~L~~~~~G~~~i 117 (161)
|++. +.||++|.+ ++.++
T Consensus 79 K~~~---~~~W~rL~~---~~~K~ 96 (125)
T 1ejf_A 79 KGES---GQSWPRLTK---ERAKL 96 (125)
T ss_dssp ESST---TCCCSSSBS---SCCCC
T ss_pred ECCC---CCCCCceec---CCCcc
Confidence 9985 369999999 77664
No 9
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=4.2e-18 Score=125.93 Aligned_cols=86 Identities=17% Similarity=0.165 Sum_probs=76.2
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCC---CccceEEEEecCEEEEEeCC---ee-eeec-cccCceecCccEEEEecCCeEEE
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKV---RSRDIAIKCTNTEISCTIAG---KE-LFQG-KLLDVVHGDEIIWTLENNGTLLN 89 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~---~~kdv~V~i~~~~L~V~vkg---~~-~i~g-~L~~~V~~deStW~i~d~~~~l~ 89 (161)
.++|.|+||.++|+|+|.++ ++ .++++.|+|++++|+|.+++ .. .++. +||++|++++|+|++.+++ |+
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~-~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~k--Ve 96 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLT-GVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDT--VL 96 (127)
T ss_dssp CCSCEEEEETTEEEEEEECT-TTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTE--EE
T ss_pred ccEEEEEcCCCEEEEEEEeC-CCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCE--EE
Confidence 46999999999999999997 45 78999999999999999874 24 6787 5999999999999999866 89
Q ss_pred EEEEeccCccccccccccee
Q psy11204 90 IVLPKAEFKGKEQIWNSLFV 109 (161)
Q Consensus 90 I~L~K~~~~~~~~~W~~L~~ 109 (161)
|+|.|++. +.||++|..
T Consensus 97 i~L~K~~~---~~~W~~L~~ 113 (127)
T 1x5m_A 97 ILCRKKVE---NTRWDYLTQ 113 (127)
T ss_dssp EEEECSSS---SCCCSSSBH
T ss_pred EEEEECCC---CCCCCcccc
Confidence 99999986 369999988
No 10
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.72 E-value=2.6e-17 Score=123.28 Aligned_cols=95 Identities=16% Similarity=0.267 Sum_probs=82.2
Q ss_pred cccCCccccCCCCeEEEee-CCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe---------------e-eeeccccC
Q psy11204 8 DEKGGVVKCPTPWGSWWQT-LDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK---------------E-LFQGKLLD 70 (161)
Q Consensus 8 ~~~~~~~~~~~~~Y~W~Qt-~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~---------------~-~i~g~L~~ 70 (161)
++..-++.-..++|.|+|| .++|+|+|.++ ++.++++.|+|++++|+|.+++. . .++++||+
T Consensus 9 ~~~~~~~~~~~~r~~W~Qt~~~~V~vtI~~k-~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~ 87 (134)
T 1wh0_A 9 DEPESMVNLAFVKNDSYEKGPDSVVVHVYVK-EICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRN 87 (134)
T ss_dssp CCGGGSEEESCCCEEEEEETTTEEEEEEECC-SBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSS
T ss_pred cCCcccccccCCCeEEEcCCCCEEEEEEEeC-CCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccc
Confidence 3444456667889999999 99999999995 68889999999999999998632 4 67889999
Q ss_pred ceecCccEEEEecCCeEEEEEEEeccCccccccccccee
Q psy11204 71 VVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFV 109 (161)
Q Consensus 71 ~V~~deStW~i~d~~~~l~I~L~K~~~~~~~~~W~~L~~ 109 (161)
.|++++|+|++.+.+ |+|+|.|++. .+|++|..
T Consensus 88 ~I~pe~S~~~v~~~k--IeI~L~K~e~----~~W~~L~~ 120 (134)
T 1wh0_A 88 LIEPEQCTFCFTASR--IDICLRKRQS----QRWGGLEA 120 (134)
T ss_dssp CEEEEEEEEEECSSE--EEEEEEESSS----CCCSCSBC
T ss_pred cCCchhCEEEEeCCE--EEEEEEECCC----Cccccccc
Confidence 999999999999866 8999999985 69999987
No 11
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.65 E-value=5.6e-16 Score=117.97 Aligned_cols=86 Identities=23% Similarity=0.378 Sum_probs=76.5
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCCCccceEEEEe-cCEEEEEeC---Cee-eeeccccCceecCccEEEEecCCeEEEEEE
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCT-NTEISCTIA---GKE-LFQGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~-~~~L~V~vk---g~~-~i~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
+|.|.|+||.+.|+|+|.++. ++++.|+|+ .++|+|.+. |.. .++.+||+.|+++ |+|++..++ |+|+|
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~---~~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~k--Iei~L 77 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPD---AKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRN--IIFSI 77 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSS---EEEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSS--EEEEE
T ss_pred CCcEEEEeCCCEEEEEEEeCC---CCceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCE--EEEEE
Confidence 589999999999999999976 478999999 689999875 455 7889999999999 999999877 89999
Q ss_pred EeccCcccccccccceeccccCCC
Q psy11204 93 PKAEFKGKEQIWNSLFVNSKENYA 116 (161)
Q Consensus 93 ~K~~~~~~~~~W~~L~~~~~G~~~ 116 (161)
.|++. .+|++|.+ ++.+
T Consensus 78 ~K~e~----~~W~rL~k---~~~K 94 (150)
T 2kmw_A 78 QKEER----SWWTRLLK---SEEK 94 (150)
T ss_dssp EECCS----SCCSCSBS---CCSS
T ss_pred EECCC----CcCccccc---CCcc
Confidence 99985 69999999 7666
No 12
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.63 E-value=8.6e-17 Score=120.19 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=72.4
Q ss_pred CCCCeEEEeeCCE-------EEEEEEcCCCCCccceEEEEecCEEEEEeCC---------ee-eeeccccCceecCccEE
Q psy11204 17 PTPWGSWWQTLDE-------VFIEVILTDKVRSRDIAIKCTNTEISCTIAG---------KE-LFQGKLLDVVHGDEIIW 79 (161)
Q Consensus 17 ~~~~Y~W~Qt~~e-------V~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg---------~~-~i~g~L~~~V~~deStW 79 (161)
.+|.|.|+||.++ |+|+|.+|. ++++.|+|++++|+|.+.+ .. .++++||+.|++++|+|
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~---~~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~ 81 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIAD---CDAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH 81 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSS---EESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecC---CCceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence 3689999999988 999999987 5699999999999997652 35 88999999999999999
Q ss_pred EEecCCeEEEEEEEeccCcccccccccceeccccCCCC
Q psy11204 80 TLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYAT 117 (161)
Q Consensus 80 ~i~d~~~~l~I~L~K~~~~~~~~~W~~L~~~~~G~~~i 117 (161)
++.+++ .|+|+|.|++. .+.||++|.+ ++.++
T Consensus 82 ~v~~~~-~vei~L~K~~~--~~~~W~rL~k---~~~K~ 113 (134)
T 2cg9_X 82 KVANGQ-HYFLKLYKKDL--ESEYWPRLTK---EKVKY 113 (134)
T ss_dssp EECCC---CEEEEEECSS--SSCCCSCSSS---SCCCC
T ss_pred EECCCE-EEEEEEEECCC--CCCCCCceec---CCCcc
Confidence 998744 48999999983 1379999999 76664
No 13
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.14 E-value=1.2e-05 Score=59.80 Aligned_cols=84 Identities=13% Similarity=0.244 Sum_probs=68.0
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCCC--ccceEEEEecCEEEEEeCCee-eeeccccCce-ecCccEEEEecCCeEEEEEEE
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKVR--SRDIAIKCTNTEISCTIAGKE-LFQGKLLDVV-HGDEIIWTLENNGTLLNIVLP 93 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~~--~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V-~~deStW~i~d~~~~l~I~L~ 93 (161)
+|.|+=+|+.+.|.|.|.+|. ++ ++++.+.+..+-+.+..+ | ++...|.++| +.+.+.-+.+.....+.|+|.
T Consensus 3 TP~F~itQd~e~viV~Ik~P~-~~~~~sdiei~v~~~~F~F~~~--PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLp 79 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISN-IRFSAVGLEIIIQENMIIFHLS--PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 79 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCS-SCCCSSSCCCEECSSSEEECSS--SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEE
T ss_pred CceEEEEECCCEEEEEEEcCc-cccCccccEEEEeCCEEEEecC--CeEEEecCCCeeecCCCcceeEeccCCEEEEEEe
Confidence 789999999999999999975 55 789999999999998886 7 8899999999 555555554432225899999
Q ss_pred eccCcccccccccc
Q psy11204 94 KAEFKGKEQIWNSL 107 (161)
Q Consensus 94 K~~~~~~~~~W~~L 107 (161)
|..+ |+.++.|
T Consensus 80 K~~~---Ge~F~dL 90 (134)
T 2k8q_A 80 KLNK---NEYFEDL 90 (134)
T ss_dssp ESST---TCCCSST
T ss_pred CCCC---CCCCCCc
Confidence 9996 6677665
No 14
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.03 E-value=7.7e-05 Score=52.19 Aligned_cols=77 Identities=13% Similarity=0.168 Sum_probs=63.6
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCC----------ee--ee--eccccCceecCccEEEEec
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG----------KE--LF--QGKLLDVVHGDEIIWTLEN 83 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg----------~~--~i--~g~L~~~V~~deStW~i~d 83 (161)
.|.+.|.++.+.+.|.+.|| |+++.||.|.+..+.|.|...- .. -| .-.|...|+++..+.++++
T Consensus 6 ~P~~di~e~~~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~ 84 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVP-GVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAG 84 (102)
T ss_dssp CCCEEEEEETTEEEEEEECT-TCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEET
T ss_pred cCcEEEEEcCCEEEEEEECC-CCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEEC
Confidence 57899999999999999996 8999999999999999985420 00 12 2368899999999999987
Q ss_pred CCeEEEEEEEeccC
Q psy11204 84 NGTLLNIVLPKAEF 97 (161)
Q Consensus 84 ~~~~l~I~L~K~~~ 97 (161)
+ +|.|+|.|...
T Consensus 85 G--vL~I~lpK~~~ 96 (102)
T 4fei_A 85 G--VLTVRFEKLRP 96 (102)
T ss_dssp T--EEEEEEEBSSC
T ss_pred C--EEEEEEEccCc
Confidence 5 58999999875
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.00011 Score=53.24 Aligned_cols=84 Identities=13% Similarity=0.201 Sum_probs=67.3
Q ss_pred cCCCCeEEEeeCCEEEEEEEcCCC-CCccceEEEEecCEEEEEeCCee-eeeccccCceecCc-c--EEEEecCCeEEEE
Q psy11204 16 CPTPWGSWWQTLDEVFIEVILTDK-VRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDE-I--IWTLENNGTLLNI 90 (161)
Q Consensus 16 ~~~~~Y~W~Qt~~eV~I~I~lp~~-~~~kdv~V~i~~~~L~V~vkg~~-~i~g~L~~~V~~de-S--tW~i~d~~~~l~I 90 (161)
-.+|.|+=+|+.+.|.|.|.+|-. +++.++.+.+..+-+.+.++ | ++...|.++|..++ + +|..+.+ .+.|
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~--PYyLRL~lP~~vved~~~~A~YD~d~g--~~~v 90 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS--PYYLRLRFPHELIDDERSTAQYDSKDE--CINV 90 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET--TEEEEEECSSCEECSTTCEEEEETTTT--EEEE
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC--CeEEEEecCcceecCCCcceEEeCCCc--EEEE
Confidence 458999999999999999999753 35889999999999999997 8 88999999996543 3 4555443 5899
Q ss_pred EEEeccCccccccccc
Q psy11204 91 VLPKAEFKGKEQIWNS 106 (161)
Q Consensus 91 ~L~K~~~~~~~~~W~~ 106 (161)
.|.|..+ |+.-+.
T Consensus 91 ~lpK~~~---GE~F~d 103 (115)
T 3eud_A 91 KVAKLNK---NEYFED 103 (115)
T ss_dssp EEEESST---TCCCCC
T ss_pred EEcCCcC---CCcCCC
Confidence 9999996 444443
No 16
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=97.86 E-value=0.00022 Score=49.34 Aligned_cols=76 Identities=20% Similarity=0.207 Sum_probs=62.0
Q ss_pred CCCeEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe--------e---------ee--eccccCceecCccE
Q psy11204 18 TPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK--------E---------LF--QGKLLDVVHGDEII 78 (161)
Q Consensus 18 ~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~--------~---------~i--~g~L~~~V~~deSt 78 (161)
.|.+.+.++.+.+.|.+.|| |+++.||.|.+..+.|.|...-. . -| .-.|...|+++..+
T Consensus 4 ~P~~di~e~~~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~ 82 (100)
T 3gla_A 4 VPRVDIKEEVNHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGIT 82 (100)
T ss_dssp CCCEEEEECSSEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCE
T ss_pred cCcEEEEECCCEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeE
Confidence 47899999999999999995 79999999999999999874210 0 11 23688899999999
Q ss_pred EEEecCCeEEEEEEEecc
Q psy11204 79 WTLENNGTLLNIVLPKAE 96 (161)
Q Consensus 79 W~i~d~~~~l~I~L~K~~ 96 (161)
.+++++ +|.|+|.|..
T Consensus 83 A~~~~G--vL~I~~pK~~ 98 (100)
T 3gla_A 83 AAGRNG--VLEIRIPKRP 98 (100)
T ss_dssp EEEETT--EEEEEEEBC-
T ss_pred EEEeCC--EEEEEEecCC
Confidence 999974 5899999986
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=97.58 E-value=0.0009 Score=48.12 Aligned_cols=78 Identities=17% Similarity=0.096 Sum_probs=64.1
Q ss_pred CCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEec-CEEEEEeCCe-----e--------ee--eccccCceecCcc-EE
Q psy11204 17 PTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTN-TEISCTIAGK-----E--------LF--QGKLLDVVHGDEI-IW 79 (161)
Q Consensus 17 ~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~-~~L~V~vkg~-----~--------~i--~g~L~~~V~~deS-tW 79 (161)
..|.+.+.++.+.+.|.+.|| |+++.||.|.+.. +.|+|...-. . -| .-.|...|+++.- +.
T Consensus 23 ~~P~~di~e~~~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A 101 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISG 101 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEE
T ss_pred CCCcEEEEEcCCEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCee
Confidence 358899999999999999996 7999999999999 9999876521 0 12 2378889999998 99
Q ss_pred EEecCCeEEEEEEEeccC
Q psy11204 80 TLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 80 ~i~d~~~~l~I~L~K~~~ 97 (161)
++.+| +|.|+|.|...
T Consensus 102 ~~~~G--vL~I~lPK~~~ 117 (123)
T 3aab_A 102 KYENG--VLTIRIPIAGT 117 (123)
T ss_dssp EEETT--EEEEEEEGGGE
T ss_pred EEcCC--EEEEEEEcCCC
Confidence 99875 48999999874
No 18
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.39 E-value=0.0016 Score=48.63 Aligned_cols=78 Identities=21% Similarity=0.338 Sum_probs=62.6
Q ss_pred CCCCeEEEeeCCEEEEEEEcCCCCCccceEEEEe-cCEEEEEeCCe--------ee---------e--eccccCceecCc
Q psy11204 17 PTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCT-NTEISCTIAGK--------EL---------F--QGKLLDVVHGDE 76 (161)
Q Consensus 17 ~~~~Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~-~~~L~V~vkg~--------~~---------i--~g~L~~~V~~de 76 (161)
..|.+.|.++.+.+.|.+.|| |+++.||.|.+. .+.|+|...-+ .+ + .-.|...|+.+.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGG
T ss_pred cCCceEEEEcCCEEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccc
Confidence 457899999999999999996 899999999995 67999876311 11 1 236888899998
Q ss_pred cEEEEecCCeEEEEEEEeccC
Q psy11204 77 IIWTLENNGTLLNIVLPKAEF 97 (161)
Q Consensus 77 StW~i~d~~~~l~I~L~K~~~ 97 (161)
.+-+++++ +|.|+|.|...
T Consensus 121 i~A~~~nG--vL~I~lPK~~~ 139 (151)
T 1gme_A 121 VKAGLENG--VLTVTVPKAEV 139 (151)
T ss_dssp CEEEEETT--EEEEEEECCCC
T ss_pred eEEEEECC--EEEEEEEccCc
Confidence 89999874 58999999874
No 19
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.34 E-value=0.002 Score=48.43 Aligned_cols=74 Identities=22% Similarity=0.228 Sum_probs=60.5
Q ss_pred eEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe--------ee------------eeccccCceecCccEEE
Q psy11204 21 GSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK--------EL------------FQGKLLDVVHGDEIIWT 80 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~--------~~------------i~g~L~~~V~~deStW~ 80 (161)
+.+.++.+.+.|.+.| +|++++||+|.+..+.|+|...-+ .+ -.-.|...|+++..+.+
T Consensus 59 vdi~e~~~~~~v~~dl-PG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~ 137 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWL-PGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAK 137 (161)
T ss_dssp EEEEECSSEEEEEEEC-TTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEE
T ss_pred eeEEEeCCEEEEEEEC-CCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEE
Confidence 8999999999999999 578999999999999999865310 01 12268889999999999
Q ss_pred EecCCeEEEEEEEeccC
Q psy11204 81 LENNGTLLNIVLPKAEF 97 (161)
Q Consensus 81 i~d~~~~l~I~L~K~~~ 97 (161)
++++ +|.|+|-|.+.
T Consensus 138 ~~nG--vL~I~lpK~~~ 152 (161)
T 4eld_A 138 FENG--VLSVILPKAES 152 (161)
T ss_dssp EETT--EEEEEEEBCGG
T ss_pred EECC--EEEEEEEcCCC
Confidence 9864 58999999874
No 20
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.20 E-value=0.0016 Score=45.40 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=59.3
Q ss_pred eEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----e--eccccCceecCccEEEE-ecCCeE
Q psy11204 21 GSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----F--QGKLLDVVHGDEIIWTL-ENNGTL 87 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i--~g~L~~~V~~deStW~i-~d~~~~ 87 (161)
..+.++.+.+.|.+.|| |+++.||.|.+..+.|.|...-+ .+ | .-.|...|+++.-+-++ .+ + +
T Consensus 4 vdi~e~~~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~n-G-v 80 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPE-G-V 80 (101)
T ss_dssp CCCCCCSSCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTT-S-E
T ss_pred EEEEEeCCEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCC-C-E
Confidence 45788999999999996 89999999999999999865411 01 2 33788899999999999 55 4 5
Q ss_pred EEEEEEeccC
Q psy11204 88 LNIVLPKAEF 97 (161)
Q Consensus 88 l~I~L~K~~~ 97 (161)
|.|+|.|...
T Consensus 81 L~I~lPK~~~ 90 (101)
T 2wj5_A 81 LSIQATPASA 90 (101)
T ss_dssp EEEEECBCCC
T ss_pred EEEEEECCCc
Confidence 8999999864
No 21
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.13 E-value=0.0079 Score=42.22 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=59.7
Q ss_pred eEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----ee--ccccCceecCccEEEE-ecCCeE
Q psy11204 21 GSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----FQ--GKLLDVVHGDEIIWTL-ENNGTL 87 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i~--g~L~~~V~~deStW~i-~d~~~~ 87 (161)
-.+.++.+.+.|.+.|| |+++.||.|.+..+.|.|...-+ .+ |. -.|...|+++.-+.++ .+ + +
T Consensus 5 ~~i~e~~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~-G-v 81 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSAD-G-M 81 (106)
T ss_dssp EEEEECSSEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTT-S-E
T ss_pred eEEEEcCCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCC-C-E
Confidence 46889999999999995 89999999999999999876311 11 22 3678889999999999 55 4 5
Q ss_pred EEEEEEeccC
Q psy11204 88 LNIVLPKAEF 97 (161)
Q Consensus 88 l~I~L~K~~~ 97 (161)
|.|+|.|...
T Consensus 82 L~I~~PK~~~ 91 (106)
T 3l1e_A 82 LTFSGPKIPS 91 (106)
T ss_dssp EEEEEEBCCC
T ss_pred EEEEEEccCc
Confidence 8999999875
No 22
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.07 E-value=0.0045 Score=41.75 Aligned_cols=70 Identities=16% Similarity=0.178 Sum_probs=54.9
Q ss_pred EeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----e--eccccCceecCccEEEEecCCeEEEEE
Q psy11204 24 WQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----F--QGKLLDVVHGDEIIWTLENNGTLLNIV 91 (161)
Q Consensus 24 ~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i--~g~L~~~V~~deStW~i~d~~~~l~I~ 91 (161)
+++.+.+.|.+.|| |+++.||+|.+..+.|+|...-+ .+ | .-.|...|+++.-+-++..++ +|.|+
T Consensus 3 ~E~~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~G-vL~I~ 80 (85)
T 3q9p_A 3 SHTADRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEG-TLTVE 80 (85)
T ss_dssp CCCCCEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTS-EEEEE
T ss_pred cCcCCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCC-EEEEE
Confidence 46888999999995 89999999999999999875310 12 2 226888899999999998344 68999
Q ss_pred EEec
Q psy11204 92 LPKA 95 (161)
Q Consensus 92 L~K~ 95 (161)
|-|.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9885
No 23
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=96.90 E-value=0.004 Score=42.36 Aligned_cols=70 Identities=11% Similarity=0.180 Sum_probs=52.1
Q ss_pred eeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCe------ee----e--eccccCceecCccEEEE-ecCCeEEEEE
Q psy11204 25 QTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGK------EL----F--QGKLLDVVHGDEIIWTL-ENNGTLLNIV 91 (161)
Q Consensus 25 Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~------~~----i--~g~L~~~V~~deStW~i-~d~~~~l~I~ 91 (161)
++.+.+.|.+.|| |+++.||.|.+..+.|.|...-+ .+ | .-.|...|+++.-+-++ .++ +|.|+
T Consensus 3 ~~~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~G--vL~I~ 79 (90)
T 2y1y_A 3 MEKDRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDG--VLTVN 79 (90)
T ss_dssp ---CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTS--EEEEE
T ss_pred cCCCEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCC--EEEEE
Confidence 4678899999996 89999999999999999876411 01 2 23688889999889999 554 58999
Q ss_pred EEeccC
Q psy11204 92 LPKAEF 97 (161)
Q Consensus 92 L~K~~~ 97 (161)
|.|...
T Consensus 80 ~pK~~~ 85 (90)
T 2y1y_A 80 GPRKQV 85 (90)
T ss_dssp ECBC--
T ss_pred EEcCCC
Confidence 999764
No 24
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.21 E-value=0.018 Score=44.14 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=56.1
Q ss_pred eEEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCee------e----e--eccccCceecCccEEEE-ecCCeE
Q psy11204 21 GSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKE------L----F--QGKLLDVVHGDEIIWTL-ENNGTL 87 (161)
Q Consensus 21 Y~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~------~----i--~g~L~~~V~~deStW~i-~d~~~~ 87 (161)
..+.++.+.+.|.+.|| |++++||+|++..+.|+|..+-+. + | .-.|...|+++.-+-++ ++|-
T Consensus 66 ~dv~e~~d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGv-- 142 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGV-- 142 (175)
T ss_dssp ---CCCCSEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSC--
T ss_pred eEEEEcCCeEEEEEECC-CCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCE--
Confidence 46778899999999995 899999999999999998764111 1 2 23688899999999999 5654
Q ss_pred EEEEEEeccC
Q psy11204 88 LNIVLPKAEF 97 (161)
Q Consensus 88 l~I~L~K~~~ 97 (161)
|.|+|-|...
T Consensus 143 L~I~lPK~~~ 152 (175)
T 2klr_A 143 LTVNGPRKQV 152 (175)
T ss_dssp EEEEEECC--
T ss_pred EEEEEECCCC
Confidence 8999999764
No 25
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=95.62 E-value=0.073 Score=44.35 Aligned_cols=77 Identities=14% Similarity=0.111 Sum_probs=61.3
Q ss_pred CCeEEEeeCC----EEEEEEEcCCCCCccceEEEEecCEEEEEeCCee---------ee--eccccCceecCccEEEEec
Q psy11204 19 PWGSWWQTLD----EVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKE---------LF--QGKLLDVVHGDEIIWTLEN 83 (161)
Q Consensus 19 ~~Y~W~Qt~~----eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~---------~i--~g~L~~~V~~deStW~i~d 83 (161)
|.....++.+ .+.|++.|| |+++.||+|++..+.|+|..+-+. -| .-.|...|+++.-+-++..
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlP-G~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVK-NFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECT-TCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECS
T ss_pred CccceEEcCCCCceEEEEEEECC-CCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeC
Confidence 4566778888 899999995 899999999999999999765210 12 2368888999999999994
Q ss_pred CCeEEEEEEEeccC
Q psy11204 84 NGTLLNIVLPKAEF 97 (161)
Q Consensus 84 ~~~~l~I~L~K~~~ 97 (161)
++ +|.|+|-|...
T Consensus 178 nG-VL~I~lPK~~~ 190 (314)
T 2bol_A 178 DD-VLVIEAPVNEP 190 (314)
T ss_dssp SS-EEEEEEEBSSC
T ss_pred CC-EEEEEEeccCc
Confidence 44 58999999875
No 26
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=90.34 E-value=1.2 Score=37.02 Aligned_cols=66 Identities=11% Similarity=0.164 Sum_probs=50.1
Q ss_pred CEEEEEEEcCCCCCccceEEEEecCEEEEEeC------C---eee----e--eccccCceecCccEEEEecCCeEEEEEE
Q psy11204 28 DEVFIEVILTDKVRSRDIAIKCTNTEISCTIA------G---KEL----F--QGKLLDVVHGDEIIWTLENNGTLLNIVL 92 (161)
Q Consensus 28 ~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk------g---~~~----i--~g~L~~~V~~deStW~i~d~~~~l~I~L 92 (161)
+.+.|.+.|.+|++++||+|.+..+.|+|... + .+. | .-.|...|+++.-+-++.+| +|.|+|
T Consensus 233 ~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dG--vL~i~~ 310 (314)
T 2bol_A 233 KKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDG--LMVVEA 310 (314)
T ss_dssp EEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETT--EEEEEE
T ss_pred cEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCC--EEEEEE
Confidence 46888888845899999999999999998653 0 011 2 22677889999989999874 489999
Q ss_pred Eec
Q psy11204 93 PKA 95 (161)
Q Consensus 93 ~K~ 95 (161)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 875
No 27
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=38.94 E-value=40 Score=22.11 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=27.1
Q ss_pred EEEEEEEcCCCCCccceEEEEecCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDIAIKCTNTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk 59 (161)
...-+|.||.++....++..++..-|+|.+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~p 95 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNGVLEIRIP 95 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETTEEEEEEE
T ss_pred EEEEEEECCCCcChHHeEEEEeCCEEEEEEe
Confidence 4666899999999999999999999998874
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=36.79 E-value=45 Score=21.50 Aligned_cols=31 Identities=6% Similarity=0.050 Sum_probs=26.6
Q ss_pred EEEEEEEcCCCCCccceEEEEe-cCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDIAIKCT-NTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv~V~i~-~~~L~V~vk 59 (161)
...-+|.||.++....+...+. ..-|+|.+.
T Consensus 51 ~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 51 CFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp EEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred EEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 5677899999999999999998 888888763
No 29
>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1
Probab=34.75 E-value=44 Score=27.86 Aligned_cols=44 Identities=5% Similarity=0.157 Sum_probs=31.4
Q ss_pred CCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccccCcee
Q psy11204 27 LDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVH 73 (161)
Q Consensus 27 ~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L~~~V~ 73 (161)
.+++.+ .+|++...+++++.++...+.+.++++ ++.+.+..+|.
T Consensus 322 ~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~ 365 (369)
T 1tvf_A 322 ENDLYD--VLPSDFSKKDYKLVVEDGKVHADYPRE-FINKDYGPPTV 365 (369)
T ss_dssp CSCEEE--EEETTCCGGGCEEEEETTEEEEECSCC-BSSTTCCSCCE
T ss_pred cCCeEE--EEeCCCcccceEEEEeCCEEEEEecce-ecccccCCCee
Confidence 445544 467777778899999888888887643 66777777764
No 30
>3vwc_A Serine protease inhibitor 1; sulphur SAD phasing, beta trefoil, serine proteas hydrolase inhibitor; 1.50A {Coprinopsis cinerea} PDB: 3n0k_A
Probab=33.66 E-value=81 Score=23.26 Aligned_cols=47 Identities=15% Similarity=0.279 Sum_probs=37.4
Q ss_pred cCC-CCCccceEEEEecCEEEEEeCCee--eeeccccCceec--CccEEEEe
Q psy11204 36 LTD-KVRSRDIAIKCTNTEISCTIAGKE--LFQGKLLDVVHG--DEIIWTLE 82 (161)
Q Consensus 36 lp~-~~~~kdv~V~i~~~~L~V~vkg~~--~i~g~L~~~V~~--deStW~i~ 82 (161)
+|. +..+....|+-..+...+..+|.+ .++|.+|+.... +...|.|+
T Consensus 36 ~p~~~~~~~~w~ve~~g~~Y~L~~~G~Pta~iDg~VFa~Ll~~~~~~kW~it 87 (149)
T 3vwc_A 36 LPEDNNSGNSWVVEKDDDAYILYCKGAPVAPQEGKLFADLLGNMEDKKWIVT 87 (149)
T ss_dssp CCTTSCTTCCEEEEEETTEEEEEETTEEEEEETTEEEECSSSCCCCCCEEEE
T ss_pred eCCCCcccceEEEEecCCEEEEEeCCCCceeeCCcEEEEeecCCCCcEEEEE
Confidence 565 455778888888899999999987 778888887765 45689998
No 31
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=33.22 E-value=37 Score=20.81 Aligned_cols=16 Identities=31% Similarity=0.391 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhCCCCC
Q psy11204 127 KKMDLEKFQIENPGFD 142 (161)
Q Consensus 127 ~~~~l~~~~~~~p~~D 142 (161)
.++.++.++.++|.||
T Consensus 12 ~~~~~~~L~~MFP~lD 27 (54)
T 1p3q_Q 12 RKDTLNTLQNMFPDMD 27 (54)
T ss_dssp HHHHHHHHHHHSTTSC
T ss_pred HHHHHHHHHHHcccCC
Confidence 4568999999999999
No 32
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=32.24 E-value=49 Score=21.45 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=26.5
Q ss_pred EEEEEEcCCCCCccceEEEE-ecCEEEEEeC
Q psy11204 30 VFIEVILTDKVRSRDIAIKC-TNTEISCTIA 59 (161)
Q Consensus 30 V~I~I~lp~~~~~kdv~V~i-~~~~L~V~vk 59 (161)
..-+|.||.++....+...+ ...-|+|.+.
T Consensus 51 f~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 51 FHRKYRIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp EEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 67789999999999999999 7888998874
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=32.17 E-value=57 Score=21.60 Aligned_cols=31 Identities=10% Similarity=0.130 Sum_probs=26.6
Q ss_pred EEEEEEEcCCCCCccceEEEEecCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDIAIKCTNTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk 59 (161)
...-+|.||.++....++..+...-|+|.+.
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lp 92 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGGVLTVRFE 92 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETTEEEEEEE
T ss_pred EEEEEEECCCCcchhHcEEEEECCEEEEEEE
Confidence 3455788999999999999999999999885
No 34
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=30.59 E-value=57 Score=21.68 Aligned_cols=30 Identities=10% Similarity=0.015 Sum_probs=26.8
Q ss_pred EEEEEEcCCCCCccceEEEE-ecCEEEEEeC
Q psy11204 30 VFIEVILTDKVRSRDIAIKC-TNTEISCTIA 59 (161)
Q Consensus 30 V~I~I~lp~~~~~kdv~V~i-~~~~L~V~vk 59 (161)
..-+|.||.++....+...+ ...-|+|.+.
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nGvL~I~lP 86 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEGVLSIQAT 86 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTSEEEEEEC
T ss_pred EEEEEECCCCcChhHCEEEECCCCEEEEEEE
Confidence 77789999999999999999 6889999885
No 35
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=29.01 E-value=60 Score=21.83 Aligned_cols=30 Identities=7% Similarity=0.053 Sum_probs=26.6
Q ss_pred EEEEEEcCCCCCccceEEEE-ecCEEEEEeC
Q psy11204 30 VFIEVILTDKVRSRDIAIKC-TNTEISCTIA 59 (161)
Q Consensus 30 V~I~I~lp~~~~~kdv~V~i-~~~~L~V~vk 59 (161)
..-+|.||.++....+...+ ...-|+|.+.
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~GvL~I~~P 87 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADGMLTFSGP 87 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTSEEEEEEE
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 67789999999999999999 6888998874
No 36
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=28.70 E-value=96 Score=21.50 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=38.5
Q ss_pred EEEeeCCEEEEEEEcCCCCCccceEEEEecCEEEEEeC-----Ce--eeeeccccCceecCccEEEEecC
Q psy11204 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIA-----GK--ELFQGKLLDVVHGDEIIWTLENN 84 (161)
Q Consensus 22 ~W~Qt~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk-----g~--~~i~g~L~~~V~~deStW~i~d~ 84 (161)
.|.++.+.|.|.|.+-++.+...| +-+..+.|+|.+. |+ ..+-.-|......-.|.-+|..+
T Consensus 7 ~~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~ApP~dGkAN~ali~~LAk~l~V~ks~V~Iv~G 75 (108)
T 1n91_A 7 AVTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKG 75 (108)
T ss_dssp SEEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCCCSSHHHHHHHHHHHHHHHTCCCTTTEEESSC
T ss_pred eEEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEecCCCCChHHHHHHHHHHHHhCCccceEEEEec
Confidence 356677789999999887765555 5678889999986 32 11222233334445555566544
No 37
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=27.21 E-value=6.4 Score=27.87 Aligned_cols=10 Identities=20% Similarity=0.125 Sum_probs=8.4
Q ss_pred CCcCCCCCCC
Q psy11204 150 KCYDKVQDPP 159 (161)
Q Consensus 150 g~~~~~~~~~ 159 (161)
|+|.||||||
T Consensus 74 g~~~nvp~p~ 83 (111)
T 1g31_A 74 GQIRNVPHPF 83 (111)
T ss_dssp GGCEEECCHH
T ss_pred CccccCCCcc
Confidence 7889999885
No 38
>2fyg_A Replicase polyprotein 1AB; SARS virus polyprotein non-structural protein NSP10, zinc FI viral protein; 1.80A {Sars coronavirus} SCOP: g.86.1.1 PDB: 2xyq_B* 2xyr_B* 2xyv_B*
Probab=26.58 E-value=12 Score=26.87 Aligned_cols=25 Identities=20% Similarity=0.397 Sum_probs=19.1
Q ss_pred HHHHHHhCCCCC-ccCCccCCCcCCCCC
Q psy11204 131 LEKFQIENPGFD-FSRAKLAKCYDKVQD 157 (161)
Q Consensus 131 l~~~~~~~p~~D-fs~a~~~g~~~~~~~ 157 (161)
-=|.-.+||++| | ++|-|-|.++|-
T Consensus 72 YCRaHi~HP~~dG~--C~~KGkfVQiP~ 97 (128)
T 2fyg_A 72 YCRCHIDHPNPKGF--CDLKGKYVQIPT 97 (128)
T ss_dssp HHHHTCCCSSTTCC--CSSTTSEEEEEG
T ss_pred EeeecCCCCCCCce--eecCceEEEccc
Confidence 345557899998 4 788999988874
No 39
>3r24_B Non-structural protein 10 and non-structural PROT; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} PDB: 2g9t_A 2ga6_A
Probab=24.11 E-value=14 Score=27.22 Aligned_cols=25 Identities=20% Similarity=0.397 Sum_probs=19.1
Q ss_pred HHHHHHhCCCCC-ccCCccCCCcCCCCC
Q psy11204 131 LEKFQIENPGFD-FSRAKLAKCYDKVQD 157 (161)
Q Consensus 131 l~~~~~~~p~~D-fs~a~~~g~~~~~~~ 157 (161)
-=|.-.+||++| | ++|-|-|.++|-
T Consensus 79 YCRaHi~HP~~dG~--C~~KGkfVQiP~ 104 (155)
T 3r24_B 79 YCRCHIDHPNPKGF--CDLKGKYVQIPT 104 (155)
T ss_dssp HHHHTCCCSSSSSC--CSSTTSEEEEEG
T ss_pred EeeecCCCCCCCce--eeccceEEEecc
Confidence 345557899998 4 888999988874
No 40
>3sjr_A Uncharacterized protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; 2.94A {Chromobacterium violaceum}
Probab=23.30 E-value=31 Score=25.98 Aligned_cols=15 Identities=13% Similarity=0.386 Sum_probs=13.6
Q ss_pred HHHHHHHhCCCCCcc
Q psy11204 130 DLEKFQIENPGFDFS 144 (161)
Q Consensus 130 ~l~~~~~~~p~~Dfs 144 (161)
+++.|+++||+|++.
T Consensus 104 FF~~yq~qhPd~~~e 118 (175)
T 3sjr_A 104 LMELYRQQHPDWTAP 118 (175)
T ss_dssp HHHHHHHTCSSSCHH
T ss_pred HHHHHHHhCCCCCHH
Confidence 889999999999974
No 41
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Probab=22.76 E-value=80 Score=27.32 Aligned_cols=40 Identities=8% Similarity=0.224 Sum_probs=27.3
Q ss_pred eCCEEEEEEEcCCCCCccceEEEEecCEEEEEeCCeeeeeccc
Q psy11204 26 TLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKL 68 (161)
Q Consensus 26 t~~eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vkg~~~i~g~L 68 (161)
..++++++ +|++...+++++.++...+.|.... .++.+.-
T Consensus 357 ~~~d~~~~--vpk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 396 (453)
T 3hun_A 357 VENDLYDV--LPSDFSKKDYKLVVEDGKVHADYPR-EFINKDY 396 (453)
T ss_dssp ECSCEEEE--EETTCCGGGSEEEEETTEEEEECSC-CBSSTTC
T ss_pred ecCCeEEE--eecCCcccccEEEEecCcEEEecCc-eeCCCCC
Confidence 34455444 6788888999999999997777642 3444433
No 42
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=22.57 E-value=1e+02 Score=22.06 Aligned_cols=31 Identities=10% Similarity=0.197 Sum_probs=27.5
Q ss_pred EEEEEEEcCCCCCccceEEEEecCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDIAIKCTNTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv~V~i~~~~L~V~vk 59 (161)
...-+|.||.++....++..+...-|+|.+.
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lP 135 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENGVLTVTVP 135 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETTEEEEEEE
T ss_pred EEEEEEECCCCccccceEEEEECCEEEEEEE
Confidence 4677899999999999999999999999884
No 43
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=21.28 E-value=2e+02 Score=19.47 Aligned_cols=31 Identities=19% Similarity=0.037 Sum_probs=27.3
Q ss_pred EEEEEEEcCCCCCccce-EEEEecCEEEEEeC
Q psy11204 29 EVFIEVILTDKVRSRDI-AIKCTNTEISCTIA 59 (161)
Q Consensus 29 eV~I~I~lp~~~~~kdv-~V~i~~~~L~V~vk 59 (161)
...-+|.||.++....+ +..+...-|+|.+.
T Consensus 82 ~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lP 113 (123)
T 3aab_A 82 YVRKVIRLPYNVAKDAEISGKYENGVLTIRIP 113 (123)
T ss_dssp EEEEEEECSSEECTTCCCEEEEETTEEEEEEE
T ss_pred EEEEEEECCCCcCcchhCeeEEcCCEEEEEEE
Confidence 56778999999999999 99999999999874
Done!