Your job contains 1 sequence.
>psy11204
MPKLSHFDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAG
KELFQGKLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPT
IFHEMKKKMDLEKFQIENPGFDFSRAKLAKCYDKVQDPPTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11204
(161 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BUG9 - symbol:NUDCD2 "Uncharacterized protein... 326 2.1e-29 1
UNIPROTKB|Q32KU8 - symbol:NUDCD2 "NudC domain containing ... 317 1.9e-28 1
UNIPROTKB|Q8WVJ2 - symbol:NUDCD2 "NudC domain-containing ... 317 1.9e-28 1
UNIPROTKB|F1RR73 - symbol:NUDCD2 "Uncharacterized protein... 317 1.9e-28 1
RGD|1307203 - symbol:Nudcd2 "NudC domain containing 2" sp... 317 1.9e-28 1
UNIPROTKB|E2RSY6 - symbol:NUDCD2 "Uncharacterized protein... 316 2.4e-28 1
MGI|MGI:1277103 - symbol:Nudcd2 "NudC domain containing 2... 316 2.4e-28 1
ZFIN|ZDB-GENE-040801-49 - symbol:nudcd2 "NudC domain cont... 277 3.3e-24 1
TAIR|locus:2178888 - symbol:AT5G58740 "AT5G58740" species... 148 1.5e-10 1
TAIR|locus:2137345 - symbol:AT4G27890 "AT4G27890" species... 91 2.1e-06 2
FB|FBgn0021768 - symbol:nudC "nudC" species:7227 "Drosoph... 99 3.6e-06 2
GENEDB_PFALCIPARUM|PF13_0204 - symbol:PF13_0204 "nuclear ... 101 2.0e-05 2
UNIPROTKB|Q8IDW4 - symbol:PF13_0204 "Nuclear movement pro... 101 2.0e-05 2
DICTYBASE|DDB_G0286159 - symbol:nudc "nuclear distributio... 102 0.00024 1
WB|WBGene00003829 - symbol:nud-1 species:6239 "Caenorhabd... 88 0.00039 2
>UNIPROTKB|E1BUG9 [details] [associations]
symbol:NUDCD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
GO:GO:0005622 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:134492
OMA:NREAGNC GeneTree:ENSGT00390000001644 EMBL:AADN02035885
IPI:IPI00592545 RefSeq:XP_414494.2 UniGene:Gga.12128
Ensembl:ENSGALT00000002649 GeneID:416162 KEGG:gga:416162
NextBio:20819666 Uniprot:E1BUG9
Length = 157
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 65/148 (43%), Positives = 92/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++D+ + ++ ++ G+E+ QG
Sbjct: 5 FEERSGVVPCVTPWGRWYQTLEEVFIEVQVPPGTRAKDVCCSLQSRRVALSVCGREVLQG 64
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ L+ IVL K + W SL N YA DP + +M+
Sbjct: 65 KLFDSTIADEGTWTLEDR-KLIRIVLMKTN-RDAGNCWTSLLENE---YAADPWVQDQMQ 119
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 120 RKLTLERFQRENPGFDFSGAEISGNYSK 147
>UNIPROTKB|Q32KU8 [details] [associations]
symbol:NUDCD2 "NudC domain containing 2" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] GO:GO:0005622
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:134492
eggNOG:NOG319794 HOGENOM:HOG000282991 HOVERGEN:HBG056555
OMA:NREAGNC OrthoDB:EOG4HX529 GeneTree:ENSGT00390000001644
EMBL:DAAA02020941 EMBL:BC109920 EMBL:BC134768 IPI:IPI00694535
RefSeq:NP_001035643.1 UniGene:Bt.21032 SMR:Q32KU8
Ensembl:ENSBTAT00000019650 GeneID:532693 KEGG:bta:532693
InParanoid:Q32KU8 NextBio:20875773 Uniprot:Q32KU8
Length = 157
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/148 (42%), Positives = 93/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++DI + ++ + G+E+ +G
Sbjct: 5 FEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKG 64
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ ++ IVL K + + W SL + +YA DP + +M+
Sbjct: 65 KLFDSTIADEGTWTLEDR-KMVRIVLTKTK-RDAANCWTSLL---ESDYAADPWVQDQMQ 119
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 120 RKLTLERFQKENPGFDFSGAEISGNYTK 147
>UNIPROTKB|Q8WVJ2 [details] [associations]
symbol:NUDCD2 "NudC domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] GO:GO:0005737 EMBL:CH471062 GO:GO:0005815
GO:GO:0005622 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0000922
GO:GO:0000777 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
PROSITE:PS51203 EMBL:FJ215684 EMBL:AK311957 EMBL:BX538290
EMBL:BC017934 IPI:IPI00103142 RefSeq:NP_660309.1 UniGene:Hs.140443
ProteinModelPortal:Q8WVJ2 SMR:Q8WVJ2 DIP:DIP-59509N
PhosphoSite:Q8WVJ2 DMDM:67461063 PaxDb:Q8WVJ2 PeptideAtlas:Q8WVJ2
PRIDE:Q8WVJ2 DNASU:134492 Ensembl:ENST00000302764 GeneID:134492
KEGG:hsa:134492 UCSC:uc003lze.3 CTD:134492 GeneCards:GC05M162880
HGNC:HGNC:30535 HPA:HPA037385 neXtProt:NX_Q8WVJ2
PharmGKB:PA134991349 eggNOG:NOG319794 HOGENOM:HOG000282991
HOVERGEN:HBG056555 InParanoid:Q8WVJ2 OMA:NREAGNC OrthoDB:EOG4HX529
PhylomeDB:Q8WVJ2 GenomeRNAi:134492 NextBio:83386
ArrayExpress:Q8WVJ2 Bgee:Q8WVJ2 CleanEx:HS_NUDCD2
Genevestigator:Q8WVJ2 GermOnline:ENSG00000170584 Uniprot:Q8WVJ2
Length = 157
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/148 (42%), Positives = 93/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++DI + ++ ++ G+E+ +G
Sbjct: 5 FEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGREILKG 64
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ ++ IVL K + + W SL + YA DP + +M+
Sbjct: 65 KLFDSTIADEGTWTLEDR-KMVRIVLTKTK-RDAANCWTSLL---ESEYAADPWVQDQMQ 119
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 120 RKLTLERFQKENPGFDFSGAEISGNYTK 147
>UNIPROTKB|F1RR73 [details] [associations]
symbol:NUDCD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] GO:GO:0005622
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 OMA:NREAGNC
GeneTree:ENSGT00390000001644 EMBL:CU694497 RefSeq:XP_003134131.1
Ensembl:ENSSSCT00000022563 GeneID:100515244 KEGG:ssc:100515244
Uniprot:F1RR73
Length = 157
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/148 (42%), Positives = 92/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++DI + ++ + G+E+ +G
Sbjct: 5 FEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKG 64
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ ++ IVL K + + W SL + YA DP + +M+
Sbjct: 65 KLFDSTIADEGTWTLEDR-KMVRIVLTKTK-RDAANCWTSLL---ESEYAADPWVQDQMQ 119
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 120 RKLTLERFQKENPGFDFSGAEISGNYSK 147
>RGD|1307203 [details] [associations]
symbol:Nudcd2 "NudC domain containing 2" species:10116 "Rattus
norvegicus" [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
RGD:1307203 GO:GO:0005737 GO:GO:0005815 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0000922 GO:GO:0000777 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:134492
eggNOG:NOG319794 HOGENOM:HOG000282991 HOVERGEN:HBG056555
OMA:NREAGNC OrthoDB:EOG4HX529 GeneTree:ENSGT00390000001644
EMBL:BC088299 IPI:IPI00199722 RefSeq:NP_001009621.1 UniGene:Rn.3419
ProteinModelPortal:Q5M823 SMR:Q5M823 PRIDE:Q5M823
Ensembl:ENSRNOT00000004339 GeneID:287199 KEGG:rno:287199
UCSC:RGD:1307203 InParanoid:Q5M823 NextBio:625692
Genevestigator:Q5M823 GermOnline:ENSRNOG00000003225 Uniprot:Q5M823
Length = 157
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/148 (42%), Positives = 92/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++DI + ++ + G+E+ +G
Sbjct: 5 FEERSGVVPCATPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKG 64
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ ++ IVL K + + W SL + YA DP + +M+
Sbjct: 65 KLFDSTIADEGTWTLEDR-KMVRIVLTKTK-RDAANCWTSLL---ESEYAADPWVQDQMQ 119
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 120 RKLTLERFQKENPGFDFSGAEISGNYTK 147
>UNIPROTKB|E2RSY6 [details] [associations]
symbol:NUDCD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
GO:GO:0005622 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 OMA:NREAGNC
GeneTree:ENSGT00390000001644 EMBL:AAEX03003041
ProteinModelPortal:E2RSY6 PRIDE:E2RSY6 Ensembl:ENSCAFT00000027244
NextBio:20854501 Uniprot:E2RSY6
Length = 192
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/148 (42%), Positives = 92/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++DI + ++ + G+E+ +G
Sbjct: 40 FEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKG 99
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ ++ IVL K + + W SL + YA DP + +M+
Sbjct: 100 KLFDSTIADEGTWTLEDR-KMVRIVLTKTK-RDAANCWTSLL---ESEYAADPWVQDQMQ 154
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 155 RKLTLERFQKENPGFDFSGAEISGNYTK 182
>MGI|MGI:1277103 [details] [associations]
symbol:Nudcd2 "NudC domain containing 2" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1277103 GO:GO:0005737 GO:GO:0005815
InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0000922 GO:GO:0000777
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL646055 CTD:134492 eggNOG:NOG319794 HOGENOM:HOG000282991
HOVERGEN:HBG056555 OMA:NREAGNC OrthoDB:EOG4HX529 EMBL:AK004388
EMBL:AK005909 EMBL:AK010850 EMBL:AK012388 EMBL:AK031779
EMBL:BC005646 IPI:IPI00461281 RefSeq:NP_080299.4 UniGene:Mm.276504
PDB:2RH0 PDBsum:2RH0 ProteinModelPortal:Q9CQ48 SMR:Q9CQ48
STRING:Q9CQ48 PhosphoSite:Q9CQ48 PaxDb:Q9CQ48 PRIDE:Q9CQ48
Ensembl:ENSMUST00000020578 GeneID:52653 KEGG:mmu:52653
UCSC:uc007ily.1 GeneTree:ENSGT00390000001644 InParanoid:Q9CQ48
EvolutionaryTrace:Q9CQ48 NextBio:309279 Bgee:Q9CQ48
CleanEx:MM_NUDCD2 Genevestigator:Q9CQ48
GermOnline:ENSMUSG00000020328 Uniprot:Q9CQ48
Length = 157
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/148 (42%), Positives = 92/148 (62%)
Query: 7 FDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQG 66
F+E+ GVV C TPWG W+QTL+EVFIEV + R++DI + ++ + G+E+ +G
Sbjct: 5 FEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKG 64
Query: 67 KLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMK 126
KL D DE WTLE+ ++ IVL K + + W SL + YA DP + +M+
Sbjct: 65 KLFDSTIADEGTWTLEDR-KMVRIVLTKTK-RDAANCWTSLL---ESEYAADPWVQDQMQ 119
Query: 127 KKMDLEKFQIENPGFDFSRAKLAKCYDK 154
+K+ LE+FQ ENPGFDFS A+++ Y K
Sbjct: 120 RKLTLERFQKENPGFDFSGAEISGNYTK 147
>ZFIN|ZDB-GENE-040801-49 [details] [associations]
symbol:nudcd2 "NudC domain containing 2"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040801-49 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
CTD:134492 eggNOG:NOG319794 HOGENOM:HOG000282991 HOVERGEN:HBG056555
OMA:NREAGNC OrthoDB:EOG4HX529 GeneTree:ENSGT00390000001644
EMBL:CU062437 EMBL:BC078187 IPI:IPI00491108 RefSeq:NP_001003539.1
UniGene:Dr.81887 SMR:Q6DC89 Ensembl:ENSDART00000115422
GeneID:445145 KEGG:dre:445145 InParanoid:Q6DC89 NextBio:20831908
Uniprot:Q6DC89
Length = 157
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/144 (38%), Positives = 87/144 (60%)
Query: 6 HFDEKGGVVKCPTPWGSWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQ 65
HF+E+ GV+ C T WGSW+QT++EV+IEV + +++I + +I + +++F+
Sbjct: 4 HFEERSGVIPCKTAWGSWYQTMEEVYIEVNVPPGTSAKEIKCNIGSKQIELRVKDQQIFK 63
Query: 66 GKLLDVVHGDEIIWTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEM 125
GKL DE WTLE+ L+ IVL K + W SL + + DP + +M
Sbjct: 64 GKLFGSTVCDEATWTLEDK-KLIRIVLMKTN-REAGNCWQSLL---EGEFMADPWVQDQM 118
Query: 126 KKKMDLEKFQIENPGFDFSRAKLA 149
++K+ LE+FQ ENPGFDFS A+++
Sbjct: 119 QRKLTLERFQRENPGFDFSGAEIS 142
>TAIR|locus:2178888 [details] [associations]
symbol:AT5G58740 "AT5G58740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 eggNOG:NOG319794
HOGENOM:HOG000282991 OMA:NREAGNC EMBL:AY074384 EMBL:AY117251
IPI:IPI00540478 RefSeq:NP_200682.1 UniGene:At.42961
ProteinModelPortal:Q8VXX3 STRING:Q8VXX3 PaxDb:Q8VXX3 PRIDE:Q8VXX3
DNASU:835988 EnsemblPlants:AT5G58740.1 GeneID:835988
KEGG:ath:AT5G58740 TAIR:At5g58740 InParanoid:Q8VXX3
PhylomeDB:Q8VXX3 ProtClustDB:CLSN2686281 ArrayExpress:Q8VXX3
Genevestigator:Q8VXX3 Uniprot:Q8VXX3
Length = 158
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 50/135 (37%), Positives = 68/135 (50%)
Query: 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDV-VHGDEIIWTL 81
W QTL+EV + + L V + K + I I G + L V D WTL
Sbjct: 23 WDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFWTL 82
Query: 82 ENNGTLLNIVLPKAEFKGKEQIWNS--LFVNSKENYATDPTIFHEMKKKMDLEKFQIENP 139
E++ +++I L K E KG Q W S L + YATD E K+ M L++FQ ENP
Sbjct: 83 EDD--IMHITLQKRE-KG--QTWASPILGQGQLDPYATDL----EQKRLM-LQRFQEENP 132
Query: 140 GFDFSRAKLA-KCYD 153
GFDFS+A+ + C D
Sbjct: 133 GFDFSQAQFSGNCPD 147
>TAIR|locus:2137345 [details] [associations]
symbol:AT4G27890 "AT4G27890" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078579
EMBL:AL161571 InterPro:IPR008978 SUPFAM:SSF49764 eggNOG:NOG292552
HOGENOM:HOG000182245 ProtClustDB:CLSN2915895 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AY142524
IPI:IPI00547347 PIR:T09028 RefSeq:NP_194518.1 UniGene:At.32064
ProteinModelPortal:Q9STN7 SMR:Q9STN7 EnsemblPlants:AT4G27890.1
GeneID:828902 KEGG:ath:AT4G27890 TAIR:At4g27890 InParanoid:Q9STN7
OMA:AIISEME PhylomeDB:Q9STN7 Genevestigator:Q9STN7 Uniprot:Q9STN7
Length = 293
Score = 91 (37.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELF-QGKLLDVVHGDEIIWT 80
SW Q L EV I + + + +SR + + + + G++L G+ + V D+ W
Sbjct: 137 SWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWN 196
Query: 81 LENNGTLLNIVLPKAE 96
+E+ +++++L K +
Sbjct: 197 IEDQ-KMISVLLTKQD 211
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 124 EMKKKMDLEKFQIENPGFDFSRAK 147
E++KK L+KF +NPG DFS AK
Sbjct: 268 EIEKKDMLKKFMAQNPGMDFSNAK 291
>FB|FBgn0021768 [details] [associations]
symbol:nudC "nudC" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007097 "nuclear
migration" evidence=ISS;NAS] [GO:0048477 "oogenesis" evidence=NAS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
GO:GO:0005737 GO:GO:0005875 EMBL:AE014296 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0007097 eggNOG:NOG292552 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 OMA:NHHNQLA EMBL:AY071485 EMBL:AY328470
RefSeq:NP_001246805.1 RefSeq:NP_648923.1 UniGene:Dm.5904 SMR:Q9VVA6
STRING:Q9VVA6 EnsemblMetazoa:FBtr0075328 EnsemblMetazoa:FBtr0305912
GeneID:39879 KEGG:dme:Dmel_CG9710 UCSC:CG9710-RA
FlyBase:FBgn0021768 InParanoid:Q9VVA6 OrthoDB:EOG45QFW8
GenomeRNAi:39879 NextBio:815862 Uniprot:Q9VVA6
Length = 332
Score = 99 (39.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 22 SWWQTLDEVFIEVI--LTDKVRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEII 78
+W QTL+EV +++ LT +R+RD+ I + I G+ + G+L V +E +
Sbjct: 174 TWTQTLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGIKGQTPIIDGELCGEVKTEESV 233
Query: 79 WTLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMKKKMDLE 132
W L+++ T++ I L K K W+ L E + I E K DL+
Sbjct: 234 WVLQDSKTVM-ITLDKIN---KMNWWSRLVTTDPE--ISTRKINPESSKLSDLD 281
Score = 60 (26.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 124 EMKKKMD-LEKFQIENPGFDFSRAK 147
E +KK D LEKF+ ++P DFS+ K
Sbjct: 306 EDRKKQDILEKFKQQHPEMDFSKCK 330
>GENEDB_PFALCIPARUM|PF13_0204 [details] [associations]
symbol:PF13_0204 "nuclear movement protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008978 SUPFAM:SSF49764 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL844509 InterPro:IPR025934 Pfam:PF14050 RefSeq:XP_001350096.1
ProteinModelPortal:Q8IDW4 PRIDE:Q8IDW4
EnsemblProtists:PF13_0204:mRNA GeneID:814173 KEGG:pfa:PF13_0204
EuPathDB:PlasmoDB:PF3D7_1336800 ProtClustDB:CLSZ2514982
Uniprot:Q8IDW4
Length = 386
Score = 101 (40.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLE 82
W Q+++ + + + D ++++DI I T ++ + + L G+ + +E IWTLE
Sbjct: 218 WTQSINTLDMYIDTKDNIKTKDIKIDITYKKLYVKVKNQVLIDGEFFKQIKPEESIWTLE 277
Query: 83 NNGTLLNIVLPKAEFKGKEQIWNSLFVNSKE 113
+N +++I + K G E WN++ E
Sbjct: 278 DN-KIIHIFIEK--LNGMEW-WNTVIKGDAE 304
Score = 52 (23.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 LFVNSKENYATDPTIFHEMKKKMDLEKFQIENPGFDFSRAKL 148
+ + K+ PT E KK EKF+ +P DFS+A +
Sbjct: 331 MIYDQKQKAMNLPTS-DEQKKYEIFEKFKQMHPEMDFSKANI 371
>UNIPROTKB|Q8IDW4 [details] [associations]
symbol:PF13_0204 "Nuclear movement protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008978 SUPFAM:SSF49764 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL844509 InterPro:IPR025934 Pfam:PF14050 RefSeq:XP_001350096.1
ProteinModelPortal:Q8IDW4 PRIDE:Q8IDW4
EnsemblProtists:PF13_0204:mRNA GeneID:814173 KEGG:pfa:PF13_0204
EuPathDB:PlasmoDB:PF3D7_1336800 ProtClustDB:CLSZ2514982
Uniprot:Q8IDW4
Length = 386
Score = 101 (40.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 23 WWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCTIAGKELFQGKLLDVVHGDEIIWTLE 82
W Q+++ + + + D ++++DI I T ++ + + L G+ + +E IWTLE
Sbjct: 218 WTQSINTLDMYIDTKDNIKTKDIKIDITYKKLYVKVKNQVLIDGEFFKQIKPEESIWTLE 277
Query: 83 NNGTLLNIVLPKAEFKGKEQIWNSLFVNSKE 113
+N +++I + K G E WN++ E
Sbjct: 278 DN-KIIHIFIEK--LNGMEW-WNTVIKGDAE 304
Score = 52 (23.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 107 LFVNSKENYATDPTIFHEMKKKMDLEKFQIENPGFDFSRAKL 148
+ + K+ PT E KK EKF+ +P DFS+A +
Sbjct: 331 MIYDQKQKAMNLPTS-DEQKKYEIFEKFKQMHPEMDFSKANI 371
>DICTYBASE|DDB_G0286159 [details] [associations]
symbol:nudc "nuclear distribution protein C homolog"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000741 "karyogamy" evidence=IEA] dictyBase:DDB_G0286159
GO:GO:0005829 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR InterPro:IPR008978 SUPFAM:SSF49764
EMBL:AAFI02000085 GO:GO:0005874 eggNOG:NOG292552 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0000741
RefSeq:XP_637884.1 HSSP:O35685 ProteinModelPortal:Q54M64
STRING:Q54M64 EnsemblProtists:DDB0266415 GeneID:8625481
KEGG:ddi:DDB_G0286159 OMA:MEWWAHV ProtClustDB:CLSZ2728900
Uniprot:Q54M64
Length = 171
Score = 102 (41.0 bits), Expect = 0.00024, P = 0.00024
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 22 SWWQTLDEVFIEVILTDKVRSRDIAIKCTNTEISCT--IAGKELFQGKLLDVVHGDEIIW 79
+W QTL++ + + L + V+S+D+ IK N ++ I + GKL V + W
Sbjct: 14 TWSQTLNDCTLSIKLENPVKSKDLFIKIDNDHLTVKNLITNDTIIDGKLYKNVKKSDCNW 73
Query: 80 TLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKE 113
TLE+ G L I L K KG+E W+ + E
Sbjct: 74 TLES-GKNLEIELFK--LKGQEW-WSCIIQGESE 103
>WB|WBGene00003829 [details] [associations]
symbol:nud-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0035047 "centrosomal and
pronuclear rotation" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IGI;IMP]
[GO:0048489 "synaptic vesicle transport" evidence=IMP] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0042026 "protein
refolding" evidence=IDA] [GO:0051082 "unfolded protein binding"
evidence=IDA] GO:GO:0009792 GO:GO:0002009 GO:GO:0035046
GO:GO:0040010 GO:GO:0006915 GO:GO:0051082 GO:GO:0040011
GO:GO:0000910 GO:GO:0040035 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0048489 GO:GO:0040025 GO:GO:0042026 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0051932
GO:GO:0035047 EMBL:Z81546 GeneTree:ENSGT00530000063486
InterPro:IPR025934 Pfam:PF14050 OMA:NHHNQLA EMBL:AF164431
PIR:T22528 RefSeq:NP_499749.1 UniGene:Cel.19491
ProteinModelPortal:G5EE74 SMR:G5EE74 EnsemblMetazoa:F53A2.4.1
EnsemblMetazoa:F53A2.4.2 GeneID:176754 KEGG:cel:CELE_F53A2.4
CTD:176754 WormBase:F53A2.4 NextBio:893864 Uniprot:G5EE74
Length = 320
Score = 88 (36.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 23 WWQTLDEVFIEVILTD--KVRSRDIAIKCTNTEISCTIAGKE-LFQGKLLDVVHGDEIIW 79
W QTL E+ +++ + ++SRD+ +K T +S + + + GKL + + W
Sbjct: 163 WTQTLQELEVKIPIAAGFAIKSRDVVVKIEKTSVSVGLKNQAPIVDGKLPHAIKVENCNW 222
Query: 80 TLENNGTLLNIVLPKAEFKGKEQIWNSLFVNSKENYATDPTIFHEMKKKMDLE 132
+EN IVL + E WN F++S T + E K DL+
Sbjct: 223 VIENGKA---IVLTLEKINDMEW-WNR-FLDSDPPINTKE-VKPENSKLSDLD 269
Score = 55 (24.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 126 KKKMD-LEKFQIENPGFDFSRAKL 148
KKK D L++F ++P DFS AK+
Sbjct: 296 KKKHDMLQQFMKQHPEMDFSNAKI 319
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 161 161 0.00074 107 3 11 22 0.39 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 602 (64 KB)
Total size of DFA: 170 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 15.69u 0.10s 15.79t Elapsed: 00:00:08
Total cpu time: 15.69u 0.10s 15.79t Elapsed: 00:00:12
Start: Thu Aug 15 12:44:59 2013 End: Thu Aug 15 12:45:11 2013