BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11208
(116 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K GGL G + +LS ++ D GVL+E G+ LRGLFIIDP GV++ ++VN
Sbjct: 113 KNGGL--GHMNIALLSDLTKQISRDY-GVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPV 169
Query: 67 GKTLFGYFTIRSV-----ISSFGLFSVCPANWKPDSPTIKPSPAESKEYFNKVNK 116
G+++ T+R V + + G V PANW P+SPTIKP P S+EYF KVN+
Sbjct: 170 GRSVEE--TLRLVKAFQFVEAHG--EVSPANWTPESPTIKPHPTASREYFEKVNQ 220
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + +L+ RR ED GVL GI RGLFIID KGVLRQITVN
Sbjct: 91 KEGGL--GPLNIPLLADVTRRLSED-YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPV 147
Query: 67 GKTLFGYF-TIRSVISSFGLFSVCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ +++ + VCPA WKP S TIKP+ +SKEYF+K N
Sbjct: 148 GRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN 197
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + +L+ N D GVLIE G+ LRGLFIIDPKGV+R IT+N
Sbjct: 109 KEGGL--GPINIPLLADTNHSLSRDY-GVLIEEEGVALRGLFIIDPKGVIRHITINDLPV 165
Query: 67 GKTLFGYFTIRSVISSFGLF----SVCPANWKPDSPTIKPSPAESKEYFNKVNK 116
G+ + + + +F +V P NW P + TIKP+ +SKEYF NK
Sbjct: 166 GRNVDEALRL---VEAFQWTDKNGTVLPCNWTPGAATIKPTVEDSKEYFEAANK 216
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVN---V 63
K+GGL G + +L+ + + + GVL E G+ RGLFIIDPK LRQITVN V
Sbjct: 93 KRGGL--GQMNIPILADKTKCIMK-SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPV 149
Query: 64 PRTGKTLFGYFTIRSVISSFGLFSVCPANWKPDSPTIKPSPAESKEYFNKVNK 116
R + G VCPANWKP T+KP P +SKEYF V K
Sbjct: 150 GRDVDEALRLVKAFQFVEKHG--EVCPANWKPGDKTMKPDPEKSKEYFGAVAK 200
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 3 LRSLKKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVN 62
L+ KKGGL GT+ +L+ + + GVL E G+ RGLFIIDP G+LRQITVN
Sbjct: 109 LQDRKKGGL--GTMAIPILADKTKNIARS-YGVLEESQGVAYRGLFIIDPHGMLRQITVN 165
Query: 63 ---VPRTGKTLFGYFTIRSVISSFGLFSVCPANWKPDSPTIKPSPAESKE-YFNK 113
V R+ + + + G VCPANWK P +KP P S E YF+K
Sbjct: 166 DMPVGRSVEEVLRLLEAFQFVEKHG--EVCPANWKKGDPGMKPEPNASVEGYFSK 218
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + ++S R +D GVL GI RGLFIID KG+LRQIT+N
Sbjct: 93 KQGGL--GPMNIPLVSDPKRTIAQD-YGVLKADEGISFRGLFIIDDKGILRQITINDLPV 149
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNK 113
G+++ I ++ +F VCPA WKP S TIKP +SKEYF+K
Sbjct: 150 GRSV---DEILRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVNKSKEYFSK 197
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + ++S R +D GVL GI RGLFIID KG+LRQIT+N
Sbjct: 93 KQGGL--GPMNIPLVSDPKRTIAQD-YGVLKADEGISFRGLFIIDDKGILRQITINDLPV 149
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNK 113
G+++ I ++ +F VCPA WKP S TIKP +SKEYF+K
Sbjct: 150 GRSV---DEILRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVNKSKEYFSK 197
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 140 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 196
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F VCPA WKP S TI P PA +YF+K+N
Sbjct: 197 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 246
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 105 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 161
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F VCPA WKP S TI P PA +YF+K+N
Sbjct: 162 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 211
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 140 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 196
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F VCPA WKP S TI P PA +YF+K+N
Sbjct: 197 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 246
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 140 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 196
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F VCPA WKP S TI P PA +YF+K+N
Sbjct: 197 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 246
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 148 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 204
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F VCPA WKP S TI P PA +YF+K+N
Sbjct: 205 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 254
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 148 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 204
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F VCPA WKP S TI P PA +YF+K+N
Sbjct: 205 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 254
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + ++S R +D GVL GI RGLFIID KG+LRQITVN
Sbjct: 93 KQGGL--GPMNIPLVSDPKRTIAQD-YGVLKADEGISFRGLFIIDDKGILRQITVNDLPV 149
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNK 113
G+++ T+R ++ +F V PA WKP S TIKP +SKEYF+K
Sbjct: 150 GRSVDE--TLR-LVQAFQFTDKHGEVSPAGWKPGSDTIKPDVQKSKEYFSK 197
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + +LS + +D GV +E G LRGLFIID KGVLRQIT+N
Sbjct: 134 KQGGL--GPMKIPLLSDLTHQISKD-YGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPV 190
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKV 114
G+++ T+R ++ +F VCPA WKP S TI P P+ +YF+K+
Sbjct: 191 GRSVDE--TLR-LVQAFQYTDKHGEVCPAGWKPGSDTIIPDPSGKLKYFDKM 239
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 148 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 204
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F V PA WKP S TI P PA +YF+K+N
Sbjct: 205 GRSVDE--TLR-LVQAFQYTDKHGEVAPAGWKPGSETIIPDPAGKLKYFDKLN 254
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
++GGL G + +LS + +D GV +E +G LRGLFIID KG+LRQIT+N
Sbjct: 148 RQGGL--GPIRIPLLSDLTHQISKD-YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPV 204
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNKVN 115
G+++ T+R ++ +F V PA WKP S TI P PA +YF+K+N
Sbjct: 205 GRSVDE--TLR-LVQAFQYTDKHGEVAPAGWKPGSETIIPDPAGKLKYFDKLN 254
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K+GGL G + ++S R +D GVL GI RGLFIID KG+LRQITVN
Sbjct: 93 KQGGL--GPMNIPLVSDPKRTIAQD-YGVLKADEGISFRGLFIIDDKGILRQITVNDLPV 149
Query: 67 GKTLFGYFTIRSVISSFGLFS----VCPANWKPDSPTIKPSPAESKEYFNK 113
G+++ T+R ++ +F V PA WKP S TI P +SKEYF+K
Sbjct: 150 GRSVDE--TLR-LVQAFQFTDKHGEVSPAGWKPGSDTICPDVQKSKEYFSK 197
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K GGL G + +L+ R ++E GV E G RGLFIIDP G+LRQIT+N
Sbjct: 123 KSGGL--GHMKIPLLADR-KQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPV 179
Query: 67 GKTLFGYFTIRSVISSFGLF----SVCPANWKPDSPTIK 101
G+++ T+R ++ +F VCP NWK IK
Sbjct: 180 GRSVDE--TLR-LLDAFQFVEKHGEVCPVNWKRGQHGIK 215
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K GGL G + +L+ R ++E GV E G RGLFIIDP G+LRQIT+N
Sbjct: 126 KSGGL--GHMKIPLLADR-KQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPV 182
Query: 67 GKTLFGYFTIRSVISSFGLF----SVCPANWKPDSPTIK 101
G+++ T+R ++ +F VCP NWK IK
Sbjct: 183 GRSVDE--TLR-LLDAFQFVEKHGEVCPVNWKRGQHGIK 218
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRT 66
K GGL G + +L+ R ++E GV E G RGLFIIDP G+LRQIT+N
Sbjct: 123 KSGGL--GHMKIPLLADR-KQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITLNDKPV 179
Query: 67 GKTLFGYFTIRSVISSFGLF----SVCPANWKPDSPTIK 101
G+++ T+R ++ +F VCP NWK IK
Sbjct: 180 GRSVDE--TLR-LLDAFQFVEKHGEVCPVNWKRGQHGIK 215
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 6 LKKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPR 65
++KGG+ G V ++S N+ + VL + + LRGLFIID G +R TVN
Sbjct: 112 IEKGGI--GNVEFTLVSDINK-DISKNYNVLYDNS-FALRGLFIIDKNGCVRHQTVNDLP 167
Query: 66 TGKTLFGYF-TIRSVISSFGLFSVCPANWKPDSPTIKPSPAESKEYFNKVNK 116
G+ + TI S+I VCP NWK KP+ +Y N NK
Sbjct: 168 IGRNVQEVLRTIDSIIHVDTSGEVCPINWKKGQKAFKPTTESLIDYMNNANK 219
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 7 KKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVN---V 63
KKGGL G L+ + + GVL E +G+ RG+FIIDP G LRQI +N +
Sbjct: 93 KKGGL--GPXAIPXLADKTKAIAR-AYGVLDEDSGVAYRGVFIIDPNGKLRQIIINDXPI 149
Query: 64 PRTGKTLFGYFTIRSVISSFGLFSVCPANWK 94
R + + + G VCPANWK
Sbjct: 150 GRNVEEVIRLVEALQFVEEHG--EVCPANWK 178
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 32 RIGVLIEPAGIPLRGLFIIDPKGVLRQITVN---VPRTGKTLFGYFTIRSVISSFGLFSV 88
+ VL E G+ RG FIIDP GV++ I +N + R TL + V
Sbjct: 107 QFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRE-NPGEV 165
Query: 89 CPANWKPDSPTIKPS 103
CPA W+ T+KPS
Sbjct: 166 CPAKWEEGGETLKPS 180
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 6 LKKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPR 65
L KGG+ G + +LS + +D VL + + + LR +ID G+++ + VN
Sbjct: 108 LAKGGI--GNIKHTLLSDITKSISKDY-NVLFDDS-VSLRAFVLIDMNGIVQHLLVNNLA 163
Query: 66 TGKTLFGYFTIRSVISSFGLF-SVCPANWKPDSPTIKPSPAESKEYFNKV 114
G+++ I I + VCPANW+ ++KPS +Y + +
Sbjct: 164 IGRSVDEILRIIDAIQHHEKYGDVCPANWQKGKVSMKPSEEGVAQYLSTL 213
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 42 IPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTIRSVISSFGLF-SVCPANWKPDSPTI 100
+ LR +ID +GV++ + VN G+++ + + + VCPANW+ ++
Sbjct: 119 VALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPANWQKGKESM 178
Query: 101 KPSPAESKEYFNKV 114
KPS +Y + +
Sbjct: 179 KPSEEGVAKYLSNL 192
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 38 EPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYF----TIRSVISSFGLFSVCPANW 93
E G+ R F++DP+G+++ I V G+ + V + G VCPA W
Sbjct: 112 EDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPG--EVCPAKW 169
Query: 94 KPDSPTIKPS 103
K T+ PS
Sbjct: 170 KEGEATLAPS 179
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 38 EPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYF----TIRSVISSFGLFSVCPANW 93
E G+ R F++DP+G+++ I V G+ + V + G VCPA W
Sbjct: 112 EDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPG--EVCPAKW 169
Query: 94 KPDSPTIKPS 103
K T+ PS
Sbjct: 170 KEGEATLAPS 179
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 38 EPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYF----TIRSVISSFGLFSVCPANW 93
E G+ R F++DP+G+++ I V G+ + V + G VCPA W
Sbjct: 112 EDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPG--EVCPAKW 169
Query: 94 KPDSPTIKPS 103
K T+ PS
Sbjct: 170 KEGEATLAPS 179
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 38 EPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYF----TIRSVISSFGLFSVCPANW 93
E G+ R F++DP+G+++ I V G+ + V + G VCPA W
Sbjct: 112 EDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPG--EVCPAKW 169
Query: 94 KPDSPTIKPS 103
K T+ PS
Sbjct: 170 KEGEATLAPS 179
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 38 EPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYF----TIRSVISSFGLFSVCPANW 93
E G+ R F++DP+G+++ I V G+ + V + G VCPA W
Sbjct: 112 EDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPG--EVCPAKW 169
Query: 94 KPDSPTIKPS 103
K T+ PS
Sbjct: 170 KEGEATLAPS 179
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 6 LKKGGLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPR 65
++KGG+ G V+ +++ + D VL E A I LRG F+ID +R +N
Sbjct: 89 VEKGGI--GQVSFPMVADITKSISRD-YDVLFEEA-IALRGAFLIDKNMKVRHAVINDLP 144
Query: 66 TGKTLFGYFTIRSVISSFGLF-SVCPANWKPDSPTIKPSPAESKEYFNK 113
G+ + + F VCPA W+ +K + EY +
Sbjct: 145 LGRNADEMLRMVDALLHFEEHGEVCPAGWRKGDKGMKATHQGVAEYLKE 193
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 38 EPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYF----TIRSVISSFGLFSVCPANW 93
E G+ R F++DP+G+++ I V G+ + V + G V PA W
Sbjct: 112 EDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPG--EVSPAKW 169
Query: 94 KPDSPTIKPS 103
K T+ PS
Sbjct: 170 KEGEATLAPS 179
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 26 RREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTIRSVISSFGL 85
+RE GVL G+ R FI+DP ++ ++ G+ + + + S L
Sbjct: 115 KRELSQAAGVL-NADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSDEL 173
Query: 86 FSVCPANWKPDSPTIK 101
C +NW+ PT+
Sbjct: 174 ---CASNWRKGDPTLD 186
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 34 GVLIEPAGIPLRGLFIIDPKGVLRQITVNVP 64
GV E AGI RG F++D G++R + P
Sbjct: 105 GVFNEQAGIANRGTFVVDRSGIIRFAEMKQP 135
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 34 GVLIEPAGIPLRGLFIIDPKGVLRQITVNVP 64
GV E AGI RG F++D G++R + P
Sbjct: 112 GVFNEQAGIANRGTFVVDRSGIIRFAEMKQP 142
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R + G+ + I +++ L
Sbjct: 112 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV 171
Query: 90 PANW 93
PA+W
Sbjct: 172 PADW 175
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R + G+ + I +++ L
Sbjct: 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV 170
Query: 90 PANW 93
PA+W
Sbjct: 171 PADW 174
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R + G+ + I +++ L
Sbjct: 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV 170
Query: 90 PANW 93
PA+W
Sbjct: 171 PADW 174
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R + G+ + I +++ L
Sbjct: 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV 170
Query: 90 PANW 93
PA+W
Sbjct: 171 PADW 174
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R + G+ + I +++ L
Sbjct: 112 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV 171
Query: 90 PANW 93
PA+W
Sbjct: 172 PADW 175
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R + G+ + I +++ L
Sbjct: 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV 170
Query: 90 PANW 93
PA+W
Sbjct: 171 PADW 174
>pdb|3PHF|A Chain A, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|C Chain C, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|E Chain E, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|G Chain G, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|I Chain I, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|K Chain K, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|M Chain M, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|O Chain O, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|Q Chain Q, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|S Chain S, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|U Chain U, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|W Chain W, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|Y Chain Y, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|1 Chain 1, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|3 Chain 3, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
pdb|3PHF|5 Chain 5, Crystal Structure Of The Epstein-Barr Virus Gh And Gl
Complex
Length = 653
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 10 GLIEGTVTAKVLSSRNRREKEDRIGVLIEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKT 69
GLI G T+ +LS+ NR L +P +R I VLR++ +NV G
Sbjct: 372 GLI-GGATSVLLSAYNRHP-------LFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPN 423
Query: 70 LFGYFTIRSVISS 82
L Y + + + S
Sbjct: 424 LALYQLLSTALCS 436
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R G+ + I +++ L
Sbjct: 111 RLGLLHAESATHTVRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAV 170
Query: 90 PANW 93
PA+W
Sbjct: 171 PADW 174
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 32 RIGVL-IEPAGIPLRGLFIIDPKGVLRQITVNVPRTGKTLFGYFTI-RSVISSFGLFSVC 89
R+G+L E A +RG+FI+D +GV+R G+ + I +++ L
Sbjct: 112 RLGLLHAESATHTVRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAV 171
Query: 90 PANW 93
PA+W
Sbjct: 172 PADW 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,378,195
Number of Sequences: 62578
Number of extensions: 124724
Number of successful extensions: 297
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 231
Number of HSP's gapped (non-prelim): 46
length of query: 116
length of database: 14,973,337
effective HSP length: 79
effective length of query: 37
effective length of database: 10,029,675
effective search space: 371097975
effective search space used: 371097975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)