BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11212
(448 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189237918|ref|XP_001811805.1| PREDICTED: similar to transcription initiation factor TFIID subunit
6 [Tribolium castaneum]
gi|270006675|gb|EFA03123.1| hypothetical protein TcasGA2_TC013033 [Tribolium castaneum]
Length = 599
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/336 (70%), Positives = 272/336 (80%), Gaps = 14/336 (4%)
Query: 116 PVDKSAQKLESISFKC----------MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQF 165
P D + + E ISFK + H+KR KL+ DID AL KN+EP YG ++
Sbjct: 32 PDDAAKELAEDISFKLKHIIQDAAKFVHHAKRTKLMQSDIDAALKAKNLEPQYGFQSAEG 91
Query: 166 LPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP 225
LPF+ ASGGGRELHF +EKEV DLL NLN K+ LE LR+HWL I+GVQPT+PENPPP
Sbjct: 92 LPFRFASGGGRELHFIEEKEVVLNDLLQNLNAKAPLEVSLRSHWLCIDGVQPTIPENPPP 151
Query: 226 VDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYY 285
V K+ QKLES+DPI+K K +K+TSGKPT+ K +KLRNVETV +KQLATHELSVEQQLYY
Sbjct: 152 VAKNIQKLESVDPINK--KPNKETSGKPTTGK-QKLRNVETVQIKQLATHELSVEQQLYY 208
Query: 286 KEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMR 345
KEITEACVGSDE RR EALQSLA+DPGLHEMLPRMCTFI EGV+VNVVQNNLALLIYLMR
Sbjct: 209 KEITEACVGSDEARRAEALQSLASDPGLHEMLPRMCTFIIEGVRVNVVQNNLALLIYLMR 268
Query: 346 MVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNF 405
MVKALLDNQSLYLEKYLHEL+PS+ +CIVSKQLC RPE DNHWALRDFASRL++Q+ KNF
Sbjct: 269 MVKALLDNQSLYLEKYLHELIPSVTTCIVSKQLCMRPELDNHWALRDFASRLMSQICKNF 328
Query: 406 NTSTNNIQTRVTRLLSNAIND-PKINFPSLYGAIAG 440
NTSTNNIQTR+TR+ +NA+ K+ SLYGA+ G
Sbjct: 329 NTSTNNIQTRITRMFTNALQQGDKVPLSSLYGALEG 364
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 103/155 (66%), Gaps = 29/155 (18%)
Query: 2 DIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------- 46
D+YGT+ S+ESMKVIAESIGI NLPDDAAKEL+++I++ K IIQ
Sbjct: 8 DLYGTNLSVESMKVIAESIGIGNLPDDAAKELAEDISFKLKHIIQDAAKFVHHAKRTKLM 67
Query: 47 --------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
P YG ++ LPF+ ASGGGRELHF +EKEV DLL NLN K+ L
Sbjct: 68 QSDIDAALKAKNLEPQYGFQSAEGLPFRFASGGGRELHFIEEKEVVLNDLLQNLNAKAPL 127
Query: 93 ETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
E LR+HWL I+GVQPT+PENPPPV K+ QKLES+
Sbjct: 128 EVSLRSHWLCIDGVQPTIPENPPPVAKNIQKLESV 162
>gi|193695219|ref|XP_001947762.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Acyrthosiphon pisum]
Length = 526
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/314 (70%), Positives = 257/314 (81%), Gaps = 1/314 (0%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M HS R KLLP DID+AL + IEPIYG +PF++ASGGGRELHF D+K++D
Sbjct: 52 SKKFMMHSNRCKLLPSDIDNALKVFGIEPIYGFHAKDHIPFRYASGGGRELHFIDDKDID 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-D 246
+ + K LE +R HWLAI+GVQPTVPENPP V K QKLE +DP++KL K D
Sbjct: 112 LIEFVNAPLAKLPLEISIRCHWLAIDGVQPTVPENPPSVSKDVQKLECVDPLNKLKKPID 171
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
K+ SG+P++ K +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQS
Sbjct: 172 KEVSGRPSTGKAQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDESRRAEALQS 231
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
LA+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN +LYLEKYLHE++
Sbjct: 232 LASDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNPALYLEKYLHEII 291
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PS+++C+VSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTR+TR+ +NA N
Sbjct: 292 PSVVTCVVSKQLCMRPEIDNHWALRDFASRLMAQICKMFNTPTNNVQTRITRVFTNATNS 351
Query: 427 PKINFPSLYGAIAG 440
K PS+YGA+ G
Sbjct: 352 DKTALPSVYGALEG 365
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 91/153 (59%), Gaps = 29/153 (18%)
Query: 4 YGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ----------------- 46
YG++ ES+KVIAES+GI NL DDAAKE+SD+ TY K+++Q
Sbjct: 8 YGSTLPTESLKVIAESVGIGNLSDDAAKEISDSATYRLKLVLQESKKFMMHSNRCKLLPS 67
Query: 47 ------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALET 94
PIYG +PF++ASGGGRELHF D+K++D + + K LE
Sbjct: 68 DIDNALKVFGIEPIYGFHAKDHIPFRYASGGGRELHFIDDKDIDLIEFVNAPLAKLPLEI 127
Query: 95 HLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
+R HWLAI+GVQPTVPENPP V K QKLE +
Sbjct: 128 SIRCHWLAIDGVQPTVPENPPSVSKDVQKLECV 160
>gi|242015350|ref|XP_002428322.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
gi|212512918|gb|EEB15584.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
Length = 542
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/315 (72%), Positives = 253/315 (80%), Gaps = 4/315 (1%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M H KR KL D+D+AL MKNIEP+YG V +PF+ ASGGGRELHF +EKEVD
Sbjct: 52 SVKLMHHGKREKLCTGDVDNALKMKNIEPVYGFFVPDHIPFRFASGGGRELHFIEEKEVD 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG--KK 245
++ + PK LE LR HWL IEGVQPT+PENPPP+ K Q+LES+DPI KL +
Sbjct: 112 LNEITSAPLPKLPLEISLRAHWLVIEGVQPTIPENPPPISKEMQRLESVDPICKLSHNQN 171
Query: 246 DKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQ 305
KD GKPT+ KL+KL+NVETVHVKQLATHELSVEQQLYYKEITEA SDEGRR EALQ
Sbjct: 172 GKDIPGKPTTGKLQKLKNVETVHVKQLATHELSVEQQLYYKEITEAW--SDEGRRAEALQ 229
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
SLA DPGLHEMLPRMCTFI EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL
Sbjct: 230 SLACDPGLHEMLPRMCTFITEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 289
Query: 366 LPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
+PS+ +CIVSKQLC RPE DNHWALRDFASRLL Q+ NFNTSTNN+Q+R+TRL S A+
Sbjct: 290 IPSVATCIVSKQLCMRPELDNHWALRDFASRLLAQICNNFNTSTNNVQSRITRLFSRALQ 349
Query: 426 DPKINFPSLYGAIAG 440
K SLYGAI G
Sbjct: 350 GEKAPLSSLYGAIQG 364
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 108/170 (63%), Gaps = 30/170 (17%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
++ TSFSIESMKV+AESIGI NLPDDAAKELSD++++ K+IIQ
Sbjct: 7 LFQTSFSIESMKVVAESIGINNLPDDAAKELSDDVSFKLKMIIQDSVKLMHHGKREKLCT 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P+YG V +PF+ ASGGGRELHF +EKEVD ++ + PK LE
Sbjct: 67 GDVDNALKMKNIEPVYGFFVPDHIPFRFASGGGRELHFIEEKEVDLNEITSAPLPKLPLE 126
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKC-MSHSKRVKLLP 142
LR HWL IEGVQPT+PENPPP+ K Q+LES+ C +SH++ K +P
Sbjct: 127 ISLRAHWLVIEGVQPTIPENPPPISKEMQRLESVDPICKLSHNQNGKDIP 176
>gi|195591563|ref|XP_002085509.1| GD14815 [Drosophila simulans]
gi|194197518|gb|EDX11094.1| GD14815 [Drosophila simulans]
Length = 611
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/314 (68%), Positives = 262/314 (83%), Gaps = 1/314 (0%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M+H+KR KL DID AL ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 61 SAKFMNHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEID 120
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-D 246
++ ++ + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +
Sbjct: 121 LGEITSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLN 180
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
KD +GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQS
Sbjct: 181 KDAAGKPTTGKVHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQS 240
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L +DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+
Sbjct: 241 LGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELI 300
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PS+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ +
Sbjct: 301 PSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQN 360
Query: 427 PKINFPSLYGAIAG 440
K + SLYG+IAG
Sbjct: 361 DKTHLSSLYGSIAG 374
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 29/150 (19%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 21 ISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDSAKFMNHAKRQKLSVRDIDM 80
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P YG F+PF+ ASGGGRELHFT++KE+D ++ ++ + K L+ LR+
Sbjct: 81 ALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLDLTLRS 140
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 141 HWFVVEGVQPTVPENPPPLSKDSQLLDSVN 170
>gi|195354204|ref|XP_002043589.1| GM19603 [Drosophila sechellia]
gi|194127757|gb|EDW49800.1| GM19603 [Drosophila sechellia]
Length = 611
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/314 (68%), Positives = 262/314 (83%), Gaps = 1/314 (0%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M+H+KR KL DID AL ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 61 SAKFMNHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEID 120
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-D 246
++ ++ + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +
Sbjct: 121 LGEITSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLN 180
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
KD +GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQS
Sbjct: 181 KDAAGKPTTGKVHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQS 240
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L +DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+
Sbjct: 241 LGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELI 300
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PS+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ +
Sbjct: 301 PSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQN 360
Query: 427 PKINFPSLYGAIAG 440
K + SLYG+IAG
Sbjct: 361 DKTHLSSLYGSIAG 374
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 29/150 (19%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 21 ISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDSAKFMNHAKRQKLSVRDIDM 80
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P YG F+PF+ ASGGGRELHFT++KE+D ++ ++ + K L+ LR+
Sbjct: 81 ALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLDLTLRS 140
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 141 HWFVVEGVQPTVPENPPPLSKDSQLLDSVN 170
>gi|195377535|ref|XP_002047544.1| GJ13501 [Drosophila virilis]
gi|194154702|gb|EDW69886.1| GJ13501 [Drosophila virilis]
Length = 616
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/312 (68%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR KL DID +L ++NIEP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMHHAKRQKLSVKDIDMSLKVRNIEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLS 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ N + K L+ LR+HW +EG+QPTVPENPPP+ K +Q L+S++P+ KL + +KD
Sbjct: 123 EITANSSVKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRAEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ N + K L+
Sbjct: 76 KDIDMSLKVRNIEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLSEITANSSVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EG+QPTVPENPPP+ K +Q L+S++
Sbjct: 136 LTLRSHWFVVEGIQPTVPENPPPLSKDSQFLDSVN 170
>gi|157114938|ref|XP_001652495.1| transcription initiation factor TFIID subunit 6 [Aedes aegypti]
gi|108877125|gb|EAT41350.1| AAEL006988-PA [Aedes aegypti]
Length = 619
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/336 (65%), Positives = 265/336 (78%), Gaps = 12/336 (3%)
Query: 116 PVDKSAQKLESISFKC----------MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQF 165
P D + + + +SFK M HSKR+K+ DID +L ++NIEP YG F
Sbjct: 31 PDDAAKELADDVSFKLKQIVQDAAKFMHHSKRMKMSIADIDHSLKVRNIEPQYGFVSPDF 90
Query: 166 LPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP 225
+PF+ ASGGGRELHF +EKE+D D++ PK L+ LR HWL ++GVQPT+PENPPP
Sbjct: 91 IPFRFASGGGRELHFIEEKEIDLADVIQTAPPKIPLDITLRAHWLCVDGVQPTIPENPPP 150
Query: 226 VDKSAQKLESIDPISKLGKKD-KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLY 284
+ K Q L+S++P++KL + KDT+GKP + K +KL+NVETVHVKQLATHELSVEQQLY
Sbjct: 151 LSKDLQALDSVNPVNKLDRAHLKDTTGKP-AIKAQKLKNVETVHVKQLATHELSVEQQLY 209
Query: 285 YKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM 344
YKEITEACVGSDE RR EALQSLA DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM
Sbjct: 210 YKEITEACVGSDEARRAEALQSLACDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM 269
Query: 345 RMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKN 404
RMV+ALLDN +LYLEKYLHEL+PS+ +CIVS+QLC RPE DNHWALRDFA+RL+ Q+ KN
Sbjct: 270 RMVRALLDNPALYLEKYLHELIPSVSTCIVSRQLCMRPELDNHWALRDFAARLMAQICKN 329
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
FNTSTNN+QTRVTRL S+A+ + K SLYGA+ G
Sbjct: 330 FNTSTNNLQTRVTRLFSSALQNDKTPLSSLYGALEG 365
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 97/155 (62%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YGT+ S+ES+KVIAESIG+ +LPDDAAKEL+D++++ K I+Q
Sbjct: 8 MYGTTLSLESIKVIAESIGVGSLPDDAAKELADDVSFKLKQIVQDAAKFMHHSKRMKMSI 67
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHF +EKE+D D++ PK L+
Sbjct: 68 ADIDHSLKVRNIEPQYGFVSPDFIPFRFASGGGRELHFIEEKEIDLADVIQTAPPKIPLD 127
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR HWL ++GVQPT+PENPPP+ K Q L+S++
Sbjct: 128 ITLRAHWLCVDGVQPTIPENPPPLSKDLQALDSVN 162
>gi|195496206|ref|XP_002095595.1| GE19612 [Drosophila yakuba]
gi|194181696|gb|EDW95307.1| GE19612 [Drosophila yakuba]
Length = 611
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/312 (68%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR KL DID AL ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMHHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ ++ + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ KL + +KD
Sbjct: 123 EITSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 97/155 (62%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ ++ + K L+
Sbjct: 76 RDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 136 LTLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVN 170
>gi|194874194|ref|XP_001973357.1| GG16046 [Drosophila erecta]
gi|190655140|gb|EDV52383.1| GG16046 [Drosophila erecta]
Length = 611
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/312 (68%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR KL DID AL ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMHHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ ++ + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ KL + +KD
Sbjct: 123 EITSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 97/155 (62%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISSESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ ++ + K L+
Sbjct: 76 RDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 136 LTLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVN 170
>gi|170032690|ref|XP_001844213.1| transcription initiation factor TFIID subunit 6 [Culex
quinquefasciatus]
gi|167873043|gb|EDS36426.1| transcription initiation factor TFIID subunit 6 [Culex
quinquefasciatus]
Length = 614
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 260/327 (79%), Gaps = 4/327 (1%)
Query: 118 DKSAQKLESI---SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D + KL+ I + K M HSKR+K+ DID +L ++NIEP YG F+PF+ ASGG
Sbjct: 40 DDVSIKLKQIVQDAAKFMHHSKRMKMSIADIDHSLKVRNIEPQYGFVSPDFIPFRFASGG 99
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GRELHF +EKE+D +++ PK L+ LR HWL ++GVQPT+PENPPP+ K Q L+
Sbjct: 100 GRELHFIEEKEIDLAEVIQTAPPKIPLDITLRAHWLCVDGVQPTIPENPPPLSKDVQALD 159
Query: 235 SIDPISKLGKKD-KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV 293
S++P++KL K KDT+GKP K KL+NVETVHVKQLATHELSVEQQLYYKEITEACV
Sbjct: 160 SVNPVNKLDKAHIKDTTGKPAIGKAHKLKNVETVHVKQLATHELSVEQQLYYKEITEACV 219
Query: 294 GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
GSDE RR EAL SLA DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN
Sbjct: 220 GSDEARRAEALTSLACDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDN 279
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+LYLEKYLHEL+PS+ +CIVS+QLC RPE DNHWALRDFA+RL+ Q+ KNFNTSTNN+Q
Sbjct: 280 PALYLEKYLHELIPSVSTCIVSRQLCMRPELDNHWALRDFAARLMAQICKNFNTSTNNLQ 339
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
TRVTRL S A+ + K SLYGA+ G
Sbjct: 340 TRVTRLFSAALQNDKTPLSSLYGALEG 366
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 33/188 (17%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YGT+ S+ES+KVIAESIG+ +LPDDAAKEL+D+++ K I+Q
Sbjct: 8 MYGTTLSLESIKVIAESIGVGSLPDDAAKELADDVSIKLKQIVQDAAKFMHHSKRMKMSI 67
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHF +EKE+D +++ PK L+
Sbjct: 68 ADIDHSLKVRNIEPQYGFVSPDFIPFRFASGGGRELHFIEEKEIDLAEVIQTAPPKIPLD 127
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKC---MSHSKRVKLLPVDIDDALN 150
LR HWL ++GVQPT+PENPPP+ K Q L+S++ +H K P I A
Sbjct: 128 ITLRAHWLCVDGVQPTIPENPPPLSKDVQALDSVNPVNKLDKAHIKDTTGKPA-IGKAHK 186
Query: 151 MKNIEPIY 158
+KN+E ++
Sbjct: 187 LKNVETVH 194
>gi|24666846|ref|NP_524161.2| TBP-associated factor 6, isoform A [Drosophila melanogaster]
gi|27923999|sp|P49847.2|TAF6_DROME RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TAFII-60; AltName: Full=TAFII-62; AltName:
Full=Transcription initiation factor TFIID 62 kDa
subunit; Short=p62
gi|15291715|gb|AAK93126.1| LD24529p [Drosophila melanogaster]
gi|23093125|gb|AAF49139.2| TBP-associated factor 6, isoform A [Drosophila melanogaster]
gi|220943388|gb|ACL84237.1| Taf6-PA [synthetic construct]
Length = 606
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M+H+KR KL DID +L ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ + + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 123 EITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ + + K L+
Sbjct: 76 RDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 136 LTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVN 170
>gi|442633400|ref|NP_001262056.1| TBP-associated factor 6, isoform B [Drosophila melanogaster]
gi|440216014|gb|AGB94749.1| TBP-associated factor 6, isoform B [Drosophila melanogaster]
Length = 605
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M+H+KR KL DID +L ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ + + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 123 EITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ + + K L+
Sbjct: 76 RDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 136 LTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVN 170
>gi|630879|pir||S42220 transcription initiation factor IID chain p62 - fruit fly
(Drosophila melanogaster)
gi|458682|gb|AAC46480.1| transcription initiation factor TFIID 62 kDa subunit [Drosophila
melanogaster]
Length = 592
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M+H+KR KL DID +L ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 49 KFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 108
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ + + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 109 EITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKD 168
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 169 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 228
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 229 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 288
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 289 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 348
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 349 THLSSLYGSIAG 360
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 2 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 61
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ + + K L+
Sbjct: 62 RDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLD 121
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 122 LTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVN 156
>gi|740569|prf||2005369A transcription factor TFIID
Length = 592
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M+H+KR KL DID +L ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 49 KFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 108
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ + + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 109 EITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKD 168
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 169 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 228
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 229 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 288
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 289 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 348
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 349 THLSSLYGSIAG 360
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 2 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 61
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ + + K L+
Sbjct: 62 RDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLD 121
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 122 LTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVN 156
>gi|194751481|ref|XP_001958055.1| GF23708 [Drosophila ananassae]
gi|190625337|gb|EDV40861.1| GF23708 [Drosophila ananassae]
Length = 619
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/314 (68%), Positives = 259/314 (82%), Gaps = 1/314 (0%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M HSKR KL DID +L ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 61 AVKFMHHSKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEID 120
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-D 246
++ ++ K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ KL + +
Sbjct: 121 LSEITSSNTVKIPLDITLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLN 180
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
KD +GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQS
Sbjct: 181 KDAAGKPTTGKMHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQS 240
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L +DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+
Sbjct: 241 LGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELI 300
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PS+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ +
Sbjct: 301 PSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQN 360
Query: 427 PKINFPSLYGAIAG 440
K + SLYG+IAG
Sbjct: 361 DKTHLSSLYGSIAG 374
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K IIQ
Sbjct: 16 LYGSSMSAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIIQDAVKFMHHSKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ ++ K L+
Sbjct: 76 RDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLSEITSSNTVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 136 ITLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVN 170
>gi|195435680|ref|XP_002065807.1| GK19071 [Drosophila willistoni]
gi|194161892|gb|EDW76793.1| GK19071 [Drosophila willistoni]
Length = 631
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/312 (68%), Positives = 259/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR KL DID AL ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 65 KFMMHAKRHKLSVRDIDMALKVRNVEPQYGFVAKDFVPFRFASGGGRELHFTEDKEIDLS 124
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
+L +N + K L+ LR+HW +EG+QPTVPENPPP+ K +Q ++S++P+ KL + +KD
Sbjct: 125 ELTSNSSLKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQFMDSVNPVIKLDQGLNKD 184
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 185 AAGKPTTGKMHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 244
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 245 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 304
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ + K
Sbjct: 305 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDK 364
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 365 THLSSLYGSIAG 376
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 29/150 (19%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
S ES+KVIAESIG+ +L DD AKEL+++++ K I+Q
Sbjct: 23 ISAESIKVIAESIGVGSLSDDGAKELAEDVSTKLKRIVQDAAKFMMHAKRHKLSVRDIDM 82
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P YG F+PF+ ASGGGRELHFT++KE+D +L +N + K L+ LR+
Sbjct: 83 ALKVRNVEPQYGFVAKDFVPFRFASGGGRELHFTEDKEIDLSELTSNSSLKIPLDLTLRS 142
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
HW +EG+QPTVPENPPP+ K +Q ++S++
Sbjct: 143 HWFVVEGIQPTVPENPPPLSKDSQFMDSVN 172
>gi|195128033|ref|XP_002008471.1| GI11798 [Drosophila mojavensis]
gi|193920080|gb|EDW18947.1| GI11798 [Drosophila mojavensis]
Length = 637
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR KL DID +L ++NIEP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMHHAKRQKLSVKDIDMSLKVRNIEPQYGFMTKDFIPFRFASGGGRELHFTEDKEIDLN 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ N + K L+ LR+HW +EG+QPTVPENPPP+ K +Q ++S++P+ KL + +KD
Sbjct: 123 EITANSSFKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQLVDSVNPVIKLDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRAEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSV 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHFT++KE+D ++ N + K L+
Sbjct: 76 KDIDMSLKVRNIEPQYGFMTKDFIPFRFASGGGRELHFTEDKEIDLNEITANSSFKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EG+QPTVPENPPP+ K +Q ++S++
Sbjct: 136 LTLRSHWFVVEGIQPTVPENPPPLSKDSQLVDSVN 170
>gi|195020556|ref|XP_001985217.1| GH16937 [Drosophila grimshawi]
gi|193898699|gb|EDV97565.1| GH16937 [Drosophila grimshawi]
Length = 613
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/312 (67%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H++R KL DID +L ++NIEP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMHHARRQKLSVRDIDMSLKVRNIEPQYGFVTKDFIPFRFASGGGRELHFTEDKEIDLS 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ N + K L+ LR+HW +EG+QPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 123 EITANSSAKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQFLDSVNPVIKMDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRAEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG++AG
Sbjct: 363 THLSSLYGSVAG 374
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI------------------ 44
+YG+S S ES+KVIAESIG+ +L DDA+KEL+++++ K +
Sbjct: 16 LYGSSISAESIKVIAESIGVGSLSDDASKELAEDVSIKLKRMAQDAAKFMHHARRQKLSV 75
Query: 45 -----------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
I+P YG F+PF+ ASGGGRELHFT++KE+D ++ N + K L+
Sbjct: 76 RDIDMSLKVRNIEPQYGFVTKDFIPFRFASGGGRELHFTEDKEIDLSEITANSSAKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EG+QPTVPENPPP+ K +Q L+S++
Sbjct: 136 LTLRSHWFVVEGIQPTVPENPPPLSKDSQFLDSVN 170
>gi|437333|gb|AAA16536.1| TAFII60 [Drosophila melanogaster]
Length = 592
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 259/312 (83%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M+H+KR KL DID +L ++N+EP YG F+P + ASGGGRELHFT++KE+D
Sbjct: 49 KFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPLRFASGGGRELHFTEDKEIDLG 108
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ + + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 109 EITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKD 168
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 169 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 228
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 229 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 288
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 289 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 348
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 349 THLSSLYGSIAG 360
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 2 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 61
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+P + ASGGGRELHFT++KE+D ++ + + K L+
Sbjct: 62 RDIDMSLKVRNVEPQYGFVAKDFIPLRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLD 121
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR+HW +EGVQPTVPENPPP+ K +Q L+S++
Sbjct: 122 LTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVN 156
>gi|312381469|gb|EFR27213.1| hypothetical protein AND_06215 [Anopheles darlingi]
Length = 862
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/336 (66%), Positives = 258/336 (76%), Gaps = 11/336 (3%)
Query: 116 PVDKSAQKLESISFKC----------MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQF 165
P D + + + +SFK M H+KR KL DID +L ++NIEP YG F
Sbjct: 224 PDDAAKELADDVSFKLKQIVQDAAKFMYHAKRSKLSIADIDHSLKVRNIEPQYGFVNPDF 283
Query: 166 LPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP 225
+PF+ ASGGGRELHF +EKE+D DL+ PK LET LR HWLA++GVQPTVPENPPP
Sbjct: 284 IPFRFASGGGRELHFVEEKEIDLSDLVQGGPPKIPLETTLRAHWLAVDGVQPTVPENPPP 343
Query: 226 VDKSAQKLESIDPISKLGKKD-KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLY 284
+ K Q L+S++P KL K KDT+GKP +K KL+NVETV VKQLATHELSVEQQLY
Sbjct: 344 LSKDVQALDSVNPAHKLDKTHLKDTTGKPAISKTHKLKNVETVQVKQLATHELSVEQQLY 403
Query: 285 YKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM 344
YKEITEACVGSDE RR EAL SL+ DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM
Sbjct: 404 YKEITEACVGSDEARRAEALTSLSCDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM 463
Query: 345 RMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKN 404
RMV+ALLDN +LYLEKYLHEL+P + +CIVS+QLC RPE DNHWALRDFA+RL+ Q+ KN
Sbjct: 464 RMVRALLDNPALYLEKYLHELIPCVSTCIVSRQLCMRPEIDNHWALRDFAARLMAQICKN 523
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
FNTSTNN+QTRVTRL S A+ K S+YGA+ G
Sbjct: 524 FNTSTNNLQTRVTRLFSAALTSDKTPLSSMYGALEG 559
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 99/155 (63%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YGT+ S+ESMKVIAESIG+ +LPDDAAKEL+D++++ K I+Q
Sbjct: 201 MYGTTLSLESMKVIAESIGVGSLPDDAAKELADDVSFKLKQIVQDAAKFMYHAKRSKLSI 260
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHF +EKE+D DL+ PK LE
Sbjct: 261 ADIDHSLKVRNIEPQYGFVNPDFIPFRFASGGGRELHFVEEKEIDLSDLVQGGPPKIPLE 320
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
T LR HWLA++GVQPTVPENPPP+ K Q L+S++
Sbjct: 321 TTLRAHWLAVDGVQPTVPENPPPLSKDVQALDSVN 355
>gi|198463837|ref|XP_001352957.2| GA16761 [Drosophila pseudoobscura pseudoobscura]
gi|198151433|gb|EAL30458.2| GA16761 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/312 (67%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K +H+KR K+L DID +L ++N+EP YG +PF+ A+GGGRELHFT++KE+D
Sbjct: 63 KFSNHAKRQKILISDIDMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLS 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ N K L+T LR+HW +EG+QPTVPENPPP+ K +Q ++S++P+ KL + +KD
Sbjct: 123 EITANNAVKIPLDTTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKLDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 93/155 (60%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+ +S ES+KVIAESIG+ L DDAAKEL ++I+ K I+Q
Sbjct: 16 LYGSVYSAESIKVIAESIGVGTLSDDAAKELGEDISIKLKRIVQDAAKFSNHAKRQKILI 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG +PF+ A+GGGRELHFT++KE+D ++ N K L+
Sbjct: 76 SDIDMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITANNAVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
T LR+HW +EG+QPTVPENPPP+ K +Q ++S++
Sbjct: 136 TTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVN 170
>gi|195173306|ref|XP_002027433.1| GL20945 [Drosophila persimilis]
gi|194113285|gb|EDW35328.1| GL20945 [Drosophila persimilis]
Length = 555
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/312 (67%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K +H+KR K+L DID +L ++N+EP YG +PF+ A+GGGRELHFT++KE+D
Sbjct: 63 KFSNHAKRQKILISDIDMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLS 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ N K L+T LR+HW +EG+QPTVPENPPP+ K +Q ++S++P+ KL + +KD
Sbjct: 123 EITANNAVKIPLDTTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKLDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ K FNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 93/155 (60%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+ +S ES+KVIAESIG+ L DDAAKEL ++I+ K I+Q
Sbjct: 16 LYGSVYSAESIKVIAESIGVGTLSDDAAKELGEDISIKLKRIVQDAAKFSNHAKRQKILI 75
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG +PF+ A+GGGRELHFT++KE+D ++ N K L+
Sbjct: 76 SDIDMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITANNAVKIPLD 135
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
T LR+HW +EG+QPTVPENPPP+ K +Q ++S++
Sbjct: 136 TTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVN 170
>gi|347971557|ref|XP_313173.5| AGAP004254-PA [Anopheles gambiae str. PEST]
gi|333468721|gb|EAA08678.5| AGAP004254-PA [Anopheles gambiae str. PEST]
Length = 685
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/327 (66%), Positives = 257/327 (78%), Gaps = 5/327 (1%)
Query: 118 DKSAQKLESI---SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D + KL+ I + K M HSKR+KL D+D +L ++NIEP YG F+PF+ ASGG
Sbjct: 40 DDVSYKLKQIVQDAVKFMHHSKRMKLSIADVDHSLKVRNIEPQYGFVARDFIPFRFASGG 99
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GRELHF +EKEVD +++ PK LE LR HWLA+EGVQPTVPENPPP+ K Q L+
Sbjct: 100 GRELHFIEEKEVDLTEMVQGQTPKIPLEPSLRAHWLAVEGVQPTVPENPPPLSKDVQALD 159
Query: 235 SIDPISKLGKKD-KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV 293
S++P KL K + KDT+GKPT K KL+N ETV VKQLA HELSVEQQLYYKEITEACV
Sbjct: 160 SVNPAHKLDKTNQKDTTGKPTINK-HKLKNSETVQVKQLAQHELSVEQQLYYKEITEACV 218
Query: 294 GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
GSDE RR EAL SL++DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN
Sbjct: 219 GSDEARRAEALTSLSSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDN 278
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+LYLEKYLHEL+P + +CIVS+QLC RPE DNHWALRDFA+RL+ Q+ K FNTSTNN+Q
Sbjct: 279 PALYLEKYLHELIPCVSTCIVSRQLCMRPELDNHWALRDFAARLMAQICKTFNTSTNNLQ 338
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
TRVTRL S A+ + K S+YGA+ G
Sbjct: 339 TRVTRLFSAALQNDKTPLSSMYGALQG 365
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 98/155 (63%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG++ S+ES+KVIAESIG+ +LPDDAAKEL+D+++Y K I+Q
Sbjct: 8 MYGSTLSLESIKVIAESIGVGSLPDDAAKELADDVSYKLKQIVQDAVKFMHHSKRMKLSI 67
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG F+PF+ ASGGGRELHF +EKEVD +++ PK LE
Sbjct: 68 ADVDHSLKVRNIEPQYGFVARDFIPFRFASGGGRELHFIEEKEVDLTEMVQGQTPKIPLE 127
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
LR HWLA+EGVQPTVPENPPP+ K Q L+S++
Sbjct: 128 PSLRAHWLAVEGVQPTVPENPPPLSKDVQALDSVN 162
>gi|357605897|gb|EHJ64821.1| transcription initiation factor TFIID subunit 6 [Danaus plexippus]
Length = 579
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/329 (66%), Positives = 254/329 (77%), Gaps = 20/329 (6%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M HSKR KL DID+AL +KN E YG LPF+ ASGGGRELHF +EKE+D ++
Sbjct: 1 MHHSKRQKLSITDIDNALKIKNTEAQYGFVQPDSLPFRFASGGGRELHFIEEKEIDLSEI 60
Query: 192 LTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK-KDKDTS 250
L+ PK L+ LR HWL+++GVQPTVPENPPP+ K AQKLES+DP+SKL K +KD++
Sbjct: 61 LSAPPPKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPVSKLSKPANKDSA 120
Query: 251 GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATD 310
GKP S K +L+ E+VHVKQLATHELSVEQQLYYKEITEA VGSDEGRR EALQSLA D
Sbjct: 121 GKPVSGKAARLKASESVHVKQLATHELSVEQQLYYKEITEAGVGSDEGRRAEALQSLACD 180
Query: 311 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
PGLHEMLPRMCTFI+EGVKVNVVQNNLALLIYLMRMVKA+LDNQSLYLEKYLHEL+PS+
Sbjct: 181 PGLHEMLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKAMLDNQSLYLEKYLHELIPSVS 240
Query: 371 SCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP--- 427
+CIVS+QLC RPE DNHWALRDFA+RL+ Q+ K FNTSTNN+QTRVTRL + A+ P
Sbjct: 241 TCIVSRQLCTRPEVDNHWALRDFAARLMAQLCKTFNTSTNNLQTRVTRLFAKALQCPSQT 300
Query: 428 ----------------KINFPSLYGAIAG 440
K SLYGA+ G
Sbjct: 301 NNESGPSMVASMKESEKTPLASLYGAVQG 329
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 49 YGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQP 108
YG LPF+ ASGGGRELHF +EKE+D ++L+ PK L+ LR HWL+++GVQP
Sbjct: 27 YGFVQPDSLPFRFASGGGRELHFIEEKEIDLSEILSAPPPKIPLDVSLRAHWLSVDGVQP 86
Query: 109 TVPENPPPVDKSAQKLESI 127
TVPENPPP+ K AQKLES+
Sbjct: 87 TVPENPPPLSKEAQKLESV 105
>gi|383847259|ref|XP_003699272.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Megachile rotundata]
Length = 630
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 247/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 54 KFMRHGKRQRMTTYDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLN 113
Query: 190 DLLTNLN----PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ + PK LE LR HWL I+GVQPT+PENPPPV K QKLES+DP SKL K
Sbjct: 114 EVISMSSGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLSNK 173
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 174 SQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 233
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQNNLALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 234 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLH 293
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PSI +CIVS+QLC RP+ DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 294 ELIPSIATCIVSRQLCMRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 353
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 354 LAKNSQTPLASLYGAIEG 371
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 96/158 (60%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
IYGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K IIQ
Sbjct: 7 IYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTT 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN----PK 89
P YG +PF+ ASGGGRELHF +EKE+D ++++ + PK
Sbjct: 67 YDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVISMSSGQTWPK 126
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR HWL I+GVQPT+PENPPPV K QKLES+
Sbjct: 127 LPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESV 164
>gi|241651046|ref|XP_002411265.1| transcription initiation factor tfii-D, putative [Ixodes
scapularis]
gi|215503895|gb|EEC13389.1| transcription initiation factor tfii-D, putative [Ixodes
scapularis]
Length = 630
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/315 (65%), Positives = 255/315 (80%), Gaps = 6/315 (1%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR +L D D+AL MKN+EP+YG ++PF++ASGGGREL F +EKE++
Sbjct: 54 KFMGHAKRRRLSTADFDNALKMKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELN 113
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK---- 245
D++++ PK L+ ++ HWL+IEG+QPTVPENPPPV K Q++ESIDP++KL K
Sbjct: 114 DVISSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKDLQRVESIDPVTKLNKAVLPG 173
Query: 246 DKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQ 305
G PT K E+ ++VETV VKQLATHELSVEQQLYYKEITEACVGSD+ RR EALQ
Sbjct: 174 STKVPGLPT--KQERTKHVETVKVKQLATHELSVEQQLYYKEITEACVGSDDSRRAEALQ 231
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
SLA+DPGLH+MLPR+CTFI+EGVKVNVVQNNLA LIYL+RMVKALLDNQ+LYLEKYLHEL
Sbjct: 232 SLASDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHEL 291
Query: 366 LPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
+PS+ +CIVS+QLC RP+ DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A+
Sbjct: 292 IPSVATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQ 351
Query: 426 DPKINFPSLYGAIAG 440
+ K+ S YGA++G
Sbjct: 352 NDKMPLASHYGAVSG 366
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 96/151 (63%), Gaps = 29/151 (19%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI--------------------- 44
++ S ESMKVIAESIGI NLPD+AAKEL+D ITY KV
Sbjct: 10 SNLSPESMKVIAESIGISNLPDEAAKELADEITYRLKVTAQDASKFMGHAKRRRLSTADF 69
Query: 45 --------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
++P+YG ++PF++ASGGGREL F +EKE++ D++++ PK L+ +
Sbjct: 70 DNALKMKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELNDVISSQLPKLPLDVSI 129
Query: 97 RTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
+ HWL+IEG+QPTVPENPPPV K Q++ESI
Sbjct: 130 KAHWLSIEGIQPTVPENPPPVSKDLQRVESI 160
>gi|345485287|ref|XP_001599379.2| PREDICTED: transcription initiation factor TFIID subunit 6 [Nasonia
vitripennis]
Length = 663
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/316 (68%), Positives = 250/316 (79%), Gaps = 8/316 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M +R KL DID AL KNIEP YG + +PF+ ASGGGRELHFT+EKE+D
Sbjct: 54 KFMRQGRRQKLTTHDIDHALKAKNIEPTYGFFAKEHIPFRFASGGGRELHFTEEKEIDLN 113
Query: 190 DLLTNLN----PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LET+LR+HWL I+G+QPT+PENPPPV K QKLES+DPIS +
Sbjct: 114 EIISMAGGPNWPKLPLETNLRSHWLCIDGIQPTIPENPPPVSKEVQKLESVDPISN--RN 171
Query: 246 DKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQ 305
GKP K KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE +R EA Q
Sbjct: 172 SNSNLGKP-GHKSHKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEAKRVEAFQ 230
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
SL+ DPGLHEML RMCTFIAEGV++NVVQNNLA+LIYLMRMVKALLDN SLYLEKYLHEL
Sbjct: 231 SLSADPGLHEMLARMCTFIAEGVRINVVQNNLAILIYLMRMVKALLDNPSLYLEKYLHEL 290
Query: 366 LPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI- 424
+PS+++CIVSKQLC RPE DNHWALRDFA+RL+ Q+ KNFNT+TNNIQTR+TR+ S A+
Sbjct: 291 IPSVITCIVSKQLCARPEMDNHWALRDFAARLIGQICKNFNTTTNNIQTRITRIFSQALA 350
Query: 425 NDPKINFPSLYGAIAG 440
N+ + SLYGAI G
Sbjct: 351 NNNQTPLASLYGAIYG 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YGT+ S ESMKVIAESIG+ NLPD+AAK+L+++++Y K IIQ
Sbjct: 7 MYGTTLSTESMKVIAESIGVGNLPDEAAKDLAEDVSYRLKEIIQDATKFMRQGRRQKLTT 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN----PK 89
P YG + +PF+ ASGGGRELHFT+EKE+D ++++ PK
Sbjct: 67 HDIDHALKAKNIEPTYGFFAKEHIPFRFASGGGRELHFTEEKEIDLNEIISMAGGPNWPK 126
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LET+LR+HWL I+G+QPT+PENPPPV K QKLES+
Sbjct: 127 LPLETNLRSHWLCIDGIQPTIPENPPPVSKEVQKLESV 164
>gi|66544429|ref|XP_393233.2| PREDICTED: transcription initiation factor TFIID subunit 6 [Apis
mellifera]
Length = 629
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/318 (68%), Positives = 246/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 54 KFMRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLN 113
Query: 190 DLLT----NLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LE LR HWL I+GVQPT+PENPPPV K QKLES+DP SKL K
Sbjct: 114 EVISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNK 173
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 174 SQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 233
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQNNLALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 234 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLH 293
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PSI +CIVS+QLC RPE DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 294 ELIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 353
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 354 LAKNSQTPLASLYGAIEG 371
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
IYGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K IIQ
Sbjct: 7 IYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTT 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLT----NLNPK 89
P YG +PF+ ASGGGRELHF +EKE+D ++++ PK
Sbjct: 67 HDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVISMSGGQTWPK 126
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR HWL I+GVQPT+PENPPPV K QKLES+
Sbjct: 127 LPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESV 164
>gi|427789039|gb|JAA59971.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer [Rhipicephalus
pulchellus]
Length = 636
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/312 (65%), Positives = 254/312 (81%), Gaps = 1/312 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KR KL D D+AL MKN+EP+YG ++PF++ASGGGREL F +EKE++
Sbjct: 54 KFMGHAKRRKLSTFDFDNALKMKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELN 113
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+++ + PK L+ ++ HWL+IEG+QPTVPENPPPV K Q++ESIDP++KL K
Sbjct: 114 EVINSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKDLQRVESIDPVTKLSKVVVPG 173
Query: 250 SGKPT-SAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
S P +K E+ ++VETV VKQLATHELSVEQQLYYKEITEACVGSD+ RR EALQSLA
Sbjct: 174 SKVPGLPSKQERTKHVETVRVKQLATHELSVEQQLYYKEITEACVGSDDSRRAEALQSLA 233
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLH+MLPR+CTFI+EGVKVNVVQNNLA LIYL+RMVKALLDNQ+LYLEKYLHEL+PS
Sbjct: 234 SDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHELIPS 293
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+ +CIVS+QLC RP+ DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A+ + K
Sbjct: 294 VATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQNDK 353
Query: 429 INFPSLYGAIAG 440
+ S YGA++G
Sbjct: 354 MPLASHYGAVSG 365
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 96/151 (63%), Gaps = 29/151 (19%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI--------------------- 44
++ S ESMKVIAESIGI NLPD+AAKEL+D ITY KVI
Sbjct: 10 SNLSPESMKVIAESIGISNLPDEAAKELADEITYRLKVIAQDASKFMGHAKRRKLSTFDF 69
Query: 45 --------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
++P+YG ++PF++ASGGGREL F +EKE++ +++ + PK L+ +
Sbjct: 70 DNALKMKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELNEVINSQLPKLPLDVSI 129
Query: 97 RTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
+ HWL+IEG+QPTVPENPPPV K Q++ESI
Sbjct: 130 KAHWLSIEGIQPTVPENPPPVSKDLQRVESI 160
>gi|380018610|ref|XP_003693220.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Apis florea]
Length = 630
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/318 (68%), Positives = 246/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 55 KFMRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLN 114
Query: 190 DLLT----NLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LE LR HWL I+GVQPT+PENPPPV K QKLES+DP SKL K
Sbjct: 115 EVISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNK 174
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 175 SQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 234
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQNNLALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 235 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLH 294
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PSI +CIVS+QLC RPE DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 295 ELIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 354
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 355 LAKNSQTPLASLYGAIEG 372
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 34/159 (21%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI------------------ 44
IYGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K +
Sbjct: 7 IYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKELFRFDAAKFMRHGKRQRMT 66
Query: 45 ------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLT----NLNP 88
I+P YG +PF+ ASGGGRELHF +EKE+D ++++ P
Sbjct: 67 THDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVISMSGGQTWP 126
Query: 89 KSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
K LE LR HWL I+GVQPT+PENPPPV K QKLES+
Sbjct: 127 KLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESV 165
>gi|307185548|gb|EFN71510.1| Transcription initiation factor TFIID subunit 6 [Camponotus
floridanus]
Length = 636
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/318 (67%), Positives = 248/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 54 KFMRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLN 113
Query: 190 DLLTNLN----PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LE LR HWL I+GVQPTVPENPPPV K QKLES+DP +KL K
Sbjct: 114 EIVSMAGGQTWPKLPLEITLRAHWLCIDGVQPTVPENPPPVSKDVQKLESVDPTTKLSSK 173
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
+++ +KLRNVET+HVKQLATHELSVEQQLYYKEITEACVGSDEGRR EA
Sbjct: 174 NQNIGIGKPGGGGKSQKLRNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEGRRAEA 233
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQN+LALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 234 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLH 293
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PS+ +CIVS+QLC RP+ DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 294 ELIPSVATCIVSRQLCMRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 353
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 354 LAKNNQTPLASLYGAIEG 371
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 95/158 (60%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
IYGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K IIQ
Sbjct: 7 IYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTT 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN----PK 89
P YG +PF+ ASGGGRELHF +EKE+D ++++ PK
Sbjct: 67 HDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEIVSMAGGQTWPK 126
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR HWL I+GVQPTVPENPPPV K QKLES+
Sbjct: 127 LPLEITLRAHWLCIDGVQPTVPENPPPVSKDVQKLESV 164
>gi|322778974|gb|EFZ09385.1| hypothetical protein SINV_14157 [Solenopsis invicta]
Length = 606
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/318 (66%), Positives = 247/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID +L +KNIEP YG ++PF+ ASGGGRELHF +EKE+D
Sbjct: 10 KFMRHGKRQRMTAHDIDHSLKIKNIEPTYGFFAKDYIPFRFASGGGRELHFVEEKEIDLN 69
Query: 190 DLLTNLN----PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
+++ PK LE LR HWL I+GVQPT+PENPPPV K QKLES+DP +KL K
Sbjct: 70 EVVATAGGQSWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKEVQKLESVDPTTKLSSK 129
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
+++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 130 NQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 189
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQN+LALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 190 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLH 249
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PS+ +CIVS+QLC RPE DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 250 ELIPSVATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 309
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 310 LAKNSQTPLASLYGAIEG 327
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN----PKSALETHLRTHW 100
I+P YG ++PF+ ASGGGRELHF +EKE+D +++ PK LE LR HW
Sbjct: 34 IEPTYGFFAKDYIPFRFASGGGRELHFVEEKEIDLNEVVATAGGQSWPKLPLEITLRAHW 93
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESI 127
L I+GVQPT+PENPPPV K QKLES+
Sbjct: 94 LCIDGVQPTIPENPPPVSKEVQKLESV 120
>gi|332018695|gb|EGI59267.1| Transcription initiation factor TFIID subunit 6 [Acromyrmex
echinatior]
Length = 642
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/318 (67%), Positives = 246/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 54 KFMRHGKRQRMTAHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLN 113
Query: 190 DLLTNLN----PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
+++ PK LE LR HWL I+GVQPT+PENPPPV K AQKLES+DP KL K
Sbjct: 114 EIVATAGGQSWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDAQKLESVDPTIKLSSK 173
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
+++ +KLRN+ETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 174 NQNIGVGKPGGGGKSQKLRNIETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 233
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQN+LALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 234 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLH 293
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PS+ +CIVS+QLC RPE DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 294 ELIPSVATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 353
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 354 LAKNNQTPLASLYGAIEG 371
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 95/158 (60%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K I+Q
Sbjct: 7 MYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIVQDAAKFMRHGKRQRMTA 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN----PK 89
P YG +PF+ ASGGGRELHF +EKE+D +++ PK
Sbjct: 67 HDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEIVATAGGQSWPK 126
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR HWL I+GVQPT+PENPPPV K AQKLES+
Sbjct: 127 LPLEITLRAHWLCIDGVQPTIPENPPPVSKDAQKLESV 164
>gi|340721969|ref|XP_003399385.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Bombus terrestris]
Length = 640
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 246/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 64 KFMRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLN 123
Query: 190 DLLT----NLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LE LR HWL I+GVQPT+PENPPPV K QKLES+DP SKL K
Sbjct: 124 EVVSISGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNK 183
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 184 SQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 243
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQN+LALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 244 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLH 303
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PSI +CIVS+QLC RPE DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 304 ELIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 363
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 364 LAKNSQTPLASLYGAIEG 381
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
IYGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K IIQ
Sbjct: 17 IYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTT 76
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLT----NLNPK 89
P YG +PF+ ASGGGRELHF +EKE+D ++++ PK
Sbjct: 77 HDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVVSISGGQTWPK 136
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR HWL I+GVQPT+PENPPPV K QKLES+
Sbjct: 137 LPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESV 174
>gi|307198511|gb|EFN79416.1| Transcription initiation factor TFIID subunit 6 [Harpegnathos
saltator]
Length = 640
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/318 (66%), Positives = 250/318 (78%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL ++NIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 54 KFMRHGKRKRMTAYDIDHALKVRNIEPTYGFYSKDHIPFRFASGGGRELHFVEEKEIDLN 113
Query: 190 DLLTNLN----PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LE LR+HWL+I+GVQPT+PENPPPV K QKLES+DP KL K
Sbjct: 114 EVVSTTGGQTWPKLPLEITLRSHWLSIDGVQPTIPENPPPVSKDVQKLESVDPTIKLSNK 173
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
+++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 174 NQNIGIGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 233
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQN+LALLIYLMRMVKALL+N SLYLEKYLH
Sbjct: 234 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLENPSLYLEKYLH 293
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PS+ +CIVS+QLC +PE DNHWALRDFASRL++Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 294 ELIPSVATCIVSRQLCMKPEVDNHWALRDFASRLMSQICKNFNTSTNNVQTRVTRMFSQA 353
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + +I SLYGAI G
Sbjct: 354 LAKNNQIPLASLYGAIEG 371
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 97/158 (61%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K I+Q
Sbjct: 7 MYGTTLSQESVKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIVQDAAKFMRHGKRKRMTA 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN----PK 89
P YG +PF+ ASGGGRELHF +EKE+D ++++ PK
Sbjct: 67 YDIDHALKVRNIEPTYGFYSKDHIPFRFASGGGRELHFVEEKEIDLNEVVSTTGGQTWPK 126
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR+HWL+I+GVQPT+PENPPPV K QKLES+
Sbjct: 127 LPLEITLRSHWLSIDGVQPTIPENPPPVSKDVQKLESV 164
>gi|350407905|ref|XP_003488237.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Bombus impatiens]
Length = 640
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 246/318 (77%), Gaps = 7/318 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR ++ DID AL +KNIEP YG +PF+ ASGGGRELHF +EKE+D
Sbjct: 64 KFMRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHVPFRFASGGGRELHFVEEKEIDLN 123
Query: 190 DLLT----NLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
++++ PK LE LR HWL I+GVQPT+PENPPPV K QKLES+DP SKL K
Sbjct: 124 EVISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDIQKLESVDPTSKLTNK 183
Query: 246 DKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
++ +KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE RR EA
Sbjct: 184 SQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEA 243
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
LQSL+ DPGLHEML RMCTFIAEGV+VNVVQN+LALLIYLMRMVKALLDN SLYLEKYLH
Sbjct: 244 LQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLH 303
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
EL+PSI +CIVS+QLC RPE DNHWALRDFASRL+ Q+ KNFNTSTNN+QTRVTR+ S A
Sbjct: 304 ELIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQA 363
Query: 424 I-NDPKINFPSLYGAIAG 440
+ + + SLYGAI G
Sbjct: 364 LAKNSQTPLASLYGAIEG 381
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 33/158 (20%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
IYGT+ S ES+KVIAESIG+ N PD+AAK+L+++++Y K IIQ
Sbjct: 17 IYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTT 76
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLT----NLNPK 89
P YG +PF+ ASGGGRELHF +EKE+D ++++ PK
Sbjct: 77 HDIDHALKIKNIEPTYGFFAKDHVPFRFASGGGRELHFVEEKEIDLNEVISMSGGQTWPK 136
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
LE LR HWL I+GVQPT+PENPPPV K QKLES+
Sbjct: 137 LPLEITLRAHWLCIDGVQPTIPENPPPVSKDIQKLESV 174
>gi|391340028|ref|XP_003744348.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Metaseiulus occidentalis]
Length = 582
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/315 (65%), Positives = 251/315 (79%), Gaps = 9/315 (2%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K H KR KLL D+D AL +KN+EP+YG T F+PF+ ASGGGREL+F +EKE+D
Sbjct: 58 AVKFTRHGKRKKLLTSDLDSALRVKNVEPLYGFTDPHFIPFRFASGGGRELYFHEEKEID 117
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
+L+T PK L+ ++ HWL+IEG QPTVPENPPPV K QK ES+DP+SK+ K
Sbjct: 118 LNELVTLPLPKLPLDVSIKAHWLSIEGTQPTVPENPPPVPKDQQKQESLDPLSKMCK--- 174
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
P A+ ++VETV VKQLATHELSVEQQLYYKEITEACVGSD+ RR EALQSL
Sbjct: 175 -----PQQAE-RTAKHVETVRVKQLATHELSVEQQLYYKEITEACVGSDDSRRAEALQSL 228
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
++DPGLH+MLPR+CTFI+EGVKVNVVQNNLA LIYL+RMVKALLDNQSLYLEKYLHEL+P
Sbjct: 229 SSDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQSLYLEKYLHELIP 288
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
S+ +CIVS+QLC RPE DNHWALRDFASRL++Q+ KNFNTSTN IQTRVTR+ SN +++
Sbjct: 289 SVATCIVSRQLCTRPEVDNHWALRDFASRLMSQICKNFNTSTNGIQTRVTRIFSNTLSND 348
Query: 428 KINFPSLYGAIAGEG 442
++ S YGA++ G
Sbjct: 349 RMPLASTYGAVSAIG 363
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 29/155 (18%)
Query: 2 DIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------- 46
D + SIES+K++AESIG+ LP+D +E+S+++TY +VI+Q
Sbjct: 12 DRQSSQLSIESVKMMAESIGVTALPEDTCREISEDVTYRLRVILQEAVKFTRHGKRKKLL 71
Query: 47 --------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
P+YG T F+PF+ ASGGGREL+F +EKE+D +L+T PK L
Sbjct: 72 TSDLDSALRVKNVEPLYGFTDPHFIPFRFASGGGRELYFHEEKEIDLNELVTLPLPKLPL 131
Query: 93 ETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
+ ++ HWL+IEG QPTVPENPPPV K QK ES+
Sbjct: 132 DVSIKAHWLSIEGTQPTVPENPPPVPKDQQKQESL 166
>gi|427778557|gb|JAA54730.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer [Rhipicephalus
pulchellus]
Length = 657
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/333 (61%), Positives = 254/333 (76%), Gaps = 22/333 (6%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG---------------- 173
K M H+KR KL D D+AL MKN+EP+YG ++PF++ASG
Sbjct: 54 KFMGHAKRRKLSTFDFDNALKMKNVEPLYGFHCPDYVPFRYASGXXXPLYGFHCPDYVPF 113
Query: 174 -----GGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDK 228
GGREL F +EKE++ +++ + PK L+ ++ HWL+IEG+QPTVPENPPPV K
Sbjct: 114 RYASGGGRELFFVEEKELELNEVINSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSK 173
Query: 229 SAQKLESIDPISKLGKKDKDTSGKPT-SAKLEKLRNVETVHVKQLATHELSVEQQLYYKE 287
Q++ESIDP++KL K S P +K E+ ++VETV VKQLATHELSVEQQLYYKE
Sbjct: 174 DLQRVESIDPVTKLSKVVVPGSKVPGLPSKQERTKHVETVRVKQLATHELSVEQQLYYKE 233
Query: 288 ITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV 347
ITEACVGSD+ RR EALQSLA+DPGLH+MLPR+CTFI+EGVKVNVVQNNLA LIYL+RMV
Sbjct: 234 ITEACVGSDDSRRAEALQSLASDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMV 293
Query: 348 KALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNT 407
KALLDNQ+LYLEKYLHEL+PS+ +CIVS+QLC RP+ DNHWALRDFASRL+ Q+ KNFNT
Sbjct: 294 KALLDNQTLYLEKYLHELIPSVATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNT 353
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
STNN+QTRVTR+ S A+ + K+ S YGA++G
Sbjct: 354 STNNVQTRVTRMFSRALQNDKMPLASHYGAVSG 386
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 95/172 (55%), Gaps = 50/172 (29%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------- 46
++ S ESMKVIAESIGI NLPD+AAKEL+D ITY KVI Q
Sbjct: 10 SNLSPESMKVIAESIGISNLPDEAAKELADEITYRLKVIAQDASKFMGHAKRRKLSTFDF 69
Query: 47 -------------------------------PIYGLTVSQFLPFKHASGGGRELHFTDEK 75
P+YG ++PF++ASGGGREL F +EK
Sbjct: 70 DNALKMKNVEPLYGFHCPDYVPFRYASGXXXPLYGFHCPDYVPFRYASGGGRELFFVEEK 129
Query: 76 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
E++ +++ + PK L+ ++ HWL+IEG+QPTVPENPPPV K Q++ESI
Sbjct: 130 ELELNEVINSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKDLQRVESI 181
>gi|321468811|gb|EFX79794.1| hypothetical protein DAPPUDRAFT_244529 [Daphnia pulex]
Length = 476
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/311 (63%), Positives = 239/311 (76%), Gaps = 1/311 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR KL +D+D AL +KNIEP+YG + +PF+ ASGGGRELHF ++KE+D
Sbjct: 54 KFMHHGKRKKLSTMDVDHALKIKNIEPLYGFSNPDHIPFRFASGGGRELHFLEDKELDIA 113
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
D++ PK L+ LR HWL+I+G+QP VPENPP + K Q+LES DP+SKL K T
Sbjct: 114 DIIGGSLPKLPLDVSLRAHWLSIDGIQPAVPENPPSLSKDQQRLESSDPVSKLAKIGDKT 173
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
T + K + ETV VKQL HELSVEQQLYYKEITEACVGSDE RR EA QSLA+
Sbjct: 174 KKASTLTAINKPKT-ETVQVKQLTAHELSVEQQLYYKEITEACVGSDEARRAEAFQSLAS 232
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
DPGLH+MLPR+CTFIAEGV+VNVVQNNLA LIYLMRMVKALL NQ+LYLEKYLHEL+P++
Sbjct: 233 DPGLHQMLPRLCTFIAEGVRVNVVQNNLAPLIYLMRMVKALLSNQTLYLEKYLHELVPAV 292
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
SC+VSKQLC RPE DNHWALRDF+SRL+ Q+ KN++T+TNN QTRVTRL A+ + K+
Sbjct: 293 TSCMVSKQLCLRPEVDNHWALRDFSSRLIAQICKNYHTTTNNCQTRVTRLFCRALANDKM 352
Query: 430 NFPSLYGAIAG 440
S YGA+ G
Sbjct: 353 PLASFYGALVG 363
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 29/151 (19%)
Query: 5 GTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------ 46
G + IESMK++AES+G+ L D AAKEL+D I + K IIQ
Sbjct: 9 GLNLPIESMKMMAESVGVAGLSDSAAKELADEINFRVKTIIQDATKFMHHGKRKKLSTMD 68
Query: 47 -----------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH 95
P+YG + +PF+ ASGGGRELHF ++KE+D D++ PK L+
Sbjct: 69 VDHALKIKNIEPLYGFSNPDHIPFRFASGGGRELHFLEDKELDIADIIGGSLPKLPLDVS 128
Query: 96 LRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
LR HWL+I+G+QP VPENPP + K Q+LES
Sbjct: 129 LRAHWLSIDGIQPAVPENPPSLSKDQQRLES 159
>gi|391340118|ref|XP_003744392.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Metaseiulus occidentalis]
Length = 482
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/313 (61%), Positives = 247/313 (78%), Gaps = 9/313 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K +SH KR KLL D+D AL MKN+EP+YG + F+PF+ ASGGGRE++F ++KE+D
Sbjct: 53 KFVSHGKRRKLLASDLDSALRMKNVEPLYGFSDPHFIPFRFASGGGREVYFREDKEIDLC 112
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
L++ PK L+ ++ HWLAIEG+QPTVPENPP ++ QK S+DP S + ++
Sbjct: 113 QLMSAPLPKLPLDISIKAHWLAIEGIQPTVPENPPLEPRNQQKQGSLDPFSIM--QEARQ 170
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
SGKP R+ ETV VKQLATHELSVEQQLYYKEI+EACVGSD+ RR EAL SL++
Sbjct: 171 SGKPP-------RHFETVCVKQLATHELSVEQQLYYKEISEACVGSDDSRRAEALVSLSS 223
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
D GLH+MLPR+CTFI+EGVK+NVVQNNLA LIYL+RM+KALLDNQ+LYLEKYLHEL+P++
Sbjct: 224 DTGLHQMLPRLCTFISEGVKLNVVQNNLAFLIYLIRMIKALLDNQNLYLEKYLHELIPAV 283
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
+CIVSKQLC RPE DNHWALRDFASRL++Q+ +N+NTSTN IQTR+TR+LS +++ +
Sbjct: 284 ATCIVSKQLCMRPEVDNHWALRDFASRLMSQICRNYNTSTNGIQTRITRILSKVLSNDHM 343
Query: 430 NFPSLYGAIAGEG 442
++YGA++ G
Sbjct: 344 PLTAMYGAVSAVG 356
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 30/163 (18%)
Query: 5 GTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------ 46
T SIES++++AESIG+ L + +E+S+++ Y +VI+Q
Sbjct: 8 ATRLSIESVRIMAESIGVTALSQETYQEVSEDVIYRLRVILQEASKFVSHGKRRKLLASD 67
Query: 47 -----------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH 95
P+YG + F+PF+ ASGGGRE++F ++KE+D L++ PK L+
Sbjct: 68 LDSALRMKNVEPLYGFSDPHFIPFRFASGGGREVYFREDKEIDLCQLMSAPLPKLPLDIS 127
Query: 96 LRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS-FKCMSHSKR 137
++ HWLAIEG+QPTVPENPP ++ QK S+ F M +++
Sbjct: 128 IKAHWLAIEGIQPTVPENPPLEPRNQQKQGSLDPFSIMQEARQ 170
>gi|443732927|gb|ELU17490.1| hypothetical protein CAPTEDRAFT_183030 [Capitella teleta]
Length = 602
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/315 (61%), Positives = 240/315 (76%), Gaps = 3/315 (0%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H KR KL+P DID+AL +KNIEP+YG S++ PF+HASGGGRE+ F +EKE++
Sbjct: 57 KFMMHGKRRKLIPTDIDNALRLKNIEPLYGFHASEYTPFRHASGGGREVFFQEEKELELA 116
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG--KKDK 247
D++ PK L+ ++ HWL+IEG QP VPENPP V AQKLE++DP K K
Sbjct: 117 DIINAPLPKIPLDITIKAHWLSIEGQQPAVPENPPAVSLDAQKLEALDPNVKASILKPKA 176
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
+ P K K++ E V +K++ THE+SVEQQLYYKEITE+CVGSDE RR EALQSL
Sbjct: 177 KANLNPVKTK-HKVKIQEKVKIKEVTTHEMSVEQQLYYKEITESCVGSDENRRSEALQSL 235
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
ATDPGLH+MLPR TFIAEGVKVNVVQNNLALLIYLMRMVK+LLDN +LYLEKYLHEL+P
Sbjct: 236 ATDPGLHQMLPRFSTFIAEGVKVNVVQNNLALLIYLMRMVKSLLDNPTLYLEKYLHELVP 295
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
+I +CI+SKQLC RPE DNHWALRDFASR + QV K F++STN++Q+RVT++ + ++ D
Sbjct: 296 AIATCIISKQLCLRPEVDNHWALRDFASRQMAQVCKQFSSSTNSMQSRVTKIFTTSLQDE 355
Query: 428 KINFPSLYGAIAGEG 442
K S YGA+ G G
Sbjct: 356 KAALASHYGALTGLG 370
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 29/146 (19%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E +KV+AESIGI NLPD A+ LS + TY K IIQ
Sbjct: 18 ECLKVMAESIGIGNLPDGASDCLSSDATYRIKQIIQEAQKFMMHGKRRKLIPTDIDNALR 77
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG S++ PF+HASGGGRE+ F +EKE++ D++ PK L+ ++ HWL
Sbjct: 78 LKNIEPLYGFHASEYTPFRHASGGGREVFFQEEKELELADIINAPLPKIPLDITIKAHWL 137
Query: 102 AIEGVQPTVPENPPPVDKSAQKLESI 127
+IEG QP VPENPP V AQKLE++
Sbjct: 138 SIEGQQPAVPENPPAVSLDAQKLEAL 163
>gi|432898459|ref|XP_004076512.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Oryzias latipes]
Length = 638
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/318 (58%), Positives = 242/318 (76%), Gaps = 5/318 (1%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M H KR KL DID+AL +KN+EP+YG +F+PF+ ASGGGRELHF +EKEVD
Sbjct: 54 ALKFMHHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP--ISKLGKK 245
D++ P+ L+ L+ HWL+IEGVQP++PENPPP K QK ES +P + K G++
Sbjct: 114 LSDIINTPLPRVPLDVSLKAHWLSIEGVQPSIPENPPPATKEQQKTESTEPLKVVKPGQE 173
Query: 246 DKDT---SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE 302
++ G+ +A K + ++ +K +THELSVEQQLYYKEITEACVGS E +R E
Sbjct: 174 EEGAIQGKGQGATAPDGKGKEKGSIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAE 233
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
ALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKYL
Sbjct: 234 ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL 293
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
HEL+P++++CIVSKQLC RP+ DNHWALRDFA+RL+ Q K F+T+TNNIQ+R+T+ L+
Sbjct: 294 HELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQCCKTFSTTTNNIQSRITKTLTK 353
Query: 423 AINDPKINFPSLYGAIAG 440
+ D K + + YG IAG
Sbjct: 354 SWLDEKTQWTARYGCIAG 371
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 29/149 (19%)
Query: 7 SFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------------- 44
+ ESMK +AES+G+ L +++ LS+ ++Y K I
Sbjct: 13 TLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHHGKRRKLTTSDID 72
Query: 45 -------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
++P+YG +F+PF+ ASGGGRELHF +EKEVD D++ P+ L+ L+
Sbjct: 73 NALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLK 132
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKLES 126
HWL+IEGVQP++PENPPP K QK ES
Sbjct: 133 AHWLSIEGVQPSIPENPPPATKEQQKTES 161
>gi|410915422|ref|XP_003971186.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Takifugu rubripes]
Length = 636
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/318 (59%), Positives = 243/318 (76%), Gaps = 5/318 (1%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M H KR KL DID+AL +KN+EP+YG +F+PF+ ASGGGRELHF +EKEVD
Sbjct: 54 ALKFMRHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP--ISKLGKK 245
D++ P+ L+ L+ HWL+IEG+QP +PENPPPV K QK+ES +P + K G++
Sbjct: 114 LSDIINTPLPRVPLDVSLKAHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQE 173
Query: 246 DKDT-SGKPTSAKLE--KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE 302
++ T GK A K ++ + +K +THELSVEQQLYYKEITEACVGS E +R E
Sbjct: 174 EEGTIQGKTQGATAADGKGKDKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAE 233
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
ALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKYL
Sbjct: 234 ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL 293
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
HEL+P++++CIVSKQLC RP+ DNHWALRDFA+RL+ Q K F+T+TNNIQ+R+T+ +
Sbjct: 294 HELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTK 353
Query: 423 AINDPKINFPSLYGAIAG 440
++ D K + + YG IAG
Sbjct: 354 SLLDDKTQWTTRYGCIAG 371
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 29/145 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
ESMK +AESIG+ L +++ LS+ ++Y K I
Sbjct: 17 ESMKAMAESIGVGQLQEESCVALSEEVSYRIKEIAQDALKFMRHGKRRKLTTSDIDNALK 76
Query: 45 ---IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
++P+YG +F+PF+ ASGGGRELHF +EKEVD D++ P+ L+ L+ HWL
Sbjct: 77 LKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLKAHWL 136
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+IEG+QP +PENPPPV K QK+ES
Sbjct: 137 SIEGMQPAIPENPPPVPKEQQKVES 161
>gi|47222523|emb|CAG02888.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/321 (59%), Positives = 242/321 (75%), Gaps = 10/321 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M H KR KL DID+AL +KN+EP+YG +F+PF+ ASGGGRELHF +EKEVD
Sbjct: 54 ALKFMRHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP--ISKLGKK 245
D++ P+ L+ L+ HWL+IEG+QP +PENPPPV K QK+ES +P + K G++
Sbjct: 114 LSDIINTPLPRVPLDVSLKAHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQE 173
Query: 246 DKDT-SGKPTSA-----KLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
+ T GK A K +K +TV Q THELSVEQQLYYKEITEACVGS E +
Sbjct: 174 EDGTIQGKAQGATAADGKGQKGEGPDTVEAAQ--THELSVEQQLYYKEITEACVGSCEAK 231
Query: 300 RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLE
Sbjct: 232 RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLE 291
Query: 360 KYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
KYLHEL+P++++CIVSKQLC RP+ DNHWALRDFA+RL+ Q K F+T+TNNIQ+R+T+
Sbjct: 292 KYLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKT 351
Query: 420 LSNAINDPKINFPSLYGAIAG 440
+ ++ D K + + YG IAG
Sbjct: 352 FTKSLLDDKTQWTTRYGCIAG 372
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 29/145 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
ESMK +AES+G+ L +++ LS+ ++Y K I
Sbjct: 17 ESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMRHGKRRKLTTSDIDNALK 76
Query: 45 ---IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
++P+YG +F+PF+ ASGGGRELHF +EKEVD D++ P+ L+ L+ HWL
Sbjct: 77 LKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLKAHWL 136
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+IEG+QP +PENPPPV K QK+ES
Sbjct: 137 SIEGMQPAIPENPPPVPKEQQKVES 161
>gi|52218960|ref|NP_001004557.1| transcription initiation factor TFIID subunit 6 [Danio rerio]
gi|51858501|gb|AAH81612.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Danio rerio]
Length = 636
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/316 (59%), Positives = 239/316 (75%), Gaps = 3/316 (0%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M H KR KL DID AL +KN+EP+YG +F+PF+ ASGGGRELHF +EKEVD
Sbjct: 54 ALKFMHHGKRCKLTTGDIDHALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS--KLGKK 245
D++ P+ L+ L+ HWL+I+GVQP +PENPP K QK ES +P+ K G++
Sbjct: 114 LSDIINTPLPRVPLDVSLKAHWLSIDGVQPAIPENPPSASKEQQKAESTEPLKAVKPGQE 173
Query: 246 DKD-TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEAL 304
D+ K SA +++ E + +K +THELSVEQQLYYKEITEACVGS E +R EAL
Sbjct: 174 DEGFIQAKGQSAVSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEAL 233
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
QS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKYLHE
Sbjct: 234 QSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHE 293
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI 424
L+P++++CIVSKQLC RP+ DNHWALRDFA+RL+ Q K F+T+TNNIQ+R+T+ + A+
Sbjct: 294 LIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKAL 353
Query: 425 NDPKINFPSLYGAIAG 440
D K + + YG IAG
Sbjct: 354 LDEKTQWTTRYGCIAG 369
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 82/145 (56%), Gaps = 29/145 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+SMK +AES+GI +L +D+ LS+ ++Y K I
Sbjct: 17 DSMKAMAESVGIGSLQEDSCLTLSEEVSYRIKEIAQDALKFMHHGKRCKLTTGDIDHALK 76
Query: 45 ---IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
++P+YG +F+PF+ ASGGGRELHF +EKEVD D++ P+ L+ L+ HWL
Sbjct: 77 LKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLKAHWL 136
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+I+GVQP +PENPP K QK ES
Sbjct: 137 SIDGVQPAIPENPPSASKEQQKAES 161
>gi|301623978|ref|XP_002941284.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Xenopus (Silurana) tropicalis]
Length = 622
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 241/324 (74%), Gaps = 11/324 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL P DID AL +KN+EPIYG +FLPF++ASGGGRELHF +EKEVD
Sbjct: 52 ALKFMHVGKRQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVD 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS--KLGKK 245
D+++ P+ L+ ++ HWL+IEGVQP +PENPPPV K QK E+ +P+ K G++
Sbjct: 112 LSDIISTPLPRVPLDVSIKAHWLSIEGVQPAIPENPPPVTKEQQKSEATEPLKAVKPGQE 171
Query: 246 DKDTSGKPTSAKLEKLRNVET---------VHVKQLATHELSVEQQLYYKEITEACVGSD 296
+ GK A + + E + +K + HELSVEQQLYYKEITEACVGS
Sbjct: 172 EGGLKGKGQGAGAAEGKGKEKKTPILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSC 231
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +L
Sbjct: 232 EAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTL 291
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
YLEKYLHEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ KNF+T+TNNIQ+R+
Sbjct: 292 YLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRI 351
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
T+ + D + + + YG+IAG
Sbjct: 352 TKTFTKTWVDDRTPWTTRYGSIAG 375
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 29/153 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
I T ESMKVIAES+G+ + ++ + L+ +++ K + Q
Sbjct: 7 IGNTLLPSESMKVIAESVGVSQMSEETCQMLAQEVSFRIKEVTQDALKFMHVGKRQKLTP 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
PIYG +FLPF++ASGGGRELHF +EKEVD D+++ P+ L+
Sbjct: 67 NDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLSDIISTPLPRVPLD 126
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
++ HWL+IEGVQP +PENPPPV K QK E+
Sbjct: 127 VSIKAHWLSIEGVQPAIPENPPPVTKEQQKSEA 159
>gi|1912080|dbj|BAA18922.1| TFIID subunit [Xenopus laevis]
Length = 618
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/322 (57%), Positives = 236/322 (73%), Gaps = 10/322 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL P DID AL +KN+EPIYG +FLPF++ASGGGRELHF +EKE D
Sbjct: 52 ALKFMHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETD 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D+++ P+ L+ L+ HWL+IEGVQP +PENPPPV K QK E+ +P+
Sbjct: 112 LSDIISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQE 171
Query: 243 ----GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG 298
GK GK K L+ + +K + HELSVEQQLYYKEITEACVGS E
Sbjct: 172 EGLPGKGQGSGEGKGKEKKTAILKGAP-LKLKPRSIHELSVEQQLYYKEITEACVGSCEA 230
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
+R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYL
Sbjct: 231 KRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYL 290
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
EKYLHEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ KNF+T+TNNIQ+R+T+
Sbjct: 291 EKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITK 350
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
+ D + + + YG+IAG
Sbjct: 351 TFTKTWVDDRTPWTTRYGSIAG 372
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 29/153 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
I T ESMKVI+ES+GI + ++ + L+ +++ K + Q
Sbjct: 7 IGNTLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTP 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
PIYG +FLPF++ASGGGRELHF +EKE D D+++ P+ L+
Sbjct: 67 SDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLD 126
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ HWL+IEGVQP +PENPPPV K QK E+
Sbjct: 127 VSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEA 159
>gi|405971664|gb|EKC36489.1| Transcription initiation factor TFIID subunit 6 [Crassostrea gigas]
Length = 637
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/332 (57%), Positives = 242/332 (72%), Gaps = 6/332 (1%)
Query: 117 VDKSAQKLESI---SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG 173
+ S+ +L+ I + K M H KR +L DID AL +NIEP+YG +PF+ ASG
Sbjct: 41 AEDSSYRLKQIVQEAVKFMHHGKRHRLSTADIDHALRAQNIEPLYGFQTGDSIPFRFASG 100
Query: 174 GGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 233
GGRELHF +EKE D ++++ + PK ++ L+ HWL IEGVQP++PENPPP K Q+
Sbjct: 101 GGRELHFVEEKEFDLQEIVNSTLPKIPIDIALKAHWLCIEGVQPSIPENPPPASKDQQQK 160
Query: 234 ESIDPISK-LGKKDKDTSGKPTSAKLE-KLRNV-ETVHVKQLATHELSVEQQLYYKEITE 290
E +D K + +K + P K++ K + + + VK L+ HELSVEQQLYYKEITE
Sbjct: 161 EILDTTVKTVIEKQPKVAPIPEPHKIKHKHKGITDLAKVKDLSNHELSVEQQLYYKEITE 220
Query: 291 ACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
ACVG DE RR EALQSLA+DPGLH+MLPR TFI+EGVK+NVVQNNLALLIYLMRMVK++
Sbjct: 221 ACVGPDEARRSEALQSLASDPGLHQMLPRFSTFISEGVKINVVQNNLALLIYLMRMVKSI 280
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTN 410
+DNQ+LYLEKYLHE +P++ +CIVSKQLC RPE DNHWALRDFA+RL+ Q+ KNF+TSTN
Sbjct: 281 MDNQTLYLEKYLHEFIPAVCTCIVSKQLCMRPEVDNHWALRDFAARLMGQMCKNFSTSTN 340
Query: 411 NIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
NIQ R+T+ + AI K + YGAIAG G
Sbjct: 341 NIQARITKTFTQAIQSEKAALATQYGAIAGLG 372
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 85/150 (56%), Gaps = 29/150 (19%)
Query: 5 GTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------ 46
G+ ES+KVIAES+GI +PDDAA L+++ +Y K I+Q
Sbjct: 12 GSQLPGESIKVIAESVGISGIPDDAASVLAEDSSYRLKQIVQEAVKFMHHGKRHRLSTAD 71
Query: 47 -----------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH 95
P+YG +PF+ ASGGGRELHF +EKE D ++++ + PK ++
Sbjct: 72 IDHALRAQNIEPLYGFQTGDSIPFRFASGGGRELHFVEEKEFDLQEIVNSTLPKIPIDIA 131
Query: 96 LRTHWLAIEGVQPTVPENPPPVDKSAQKLE 125
L+ HWL IEGVQP++PENPPP K Q+ E
Sbjct: 132 LKAHWLCIEGVQPSIPENPPPASKDQQQKE 161
>gi|148233408|ref|NP_001081232.1| transcription initiation factor TFIID subunit 6 [Xenopus laevis]
gi|229463009|sp|Q91857.3|TAF6_XENLA RecName: Full=Transcription initiation factor TFIID subunit 6;
Short=xTAF6; AltName: Full=Transcription initiation
factor TFIID 60 kDa subunit; Short=TAF(II)60;
Short=TAFII-60; Short=TAFII60; AltName:
Full=Transcription initiation factor TFIID 70 kDa
subunit; Short=TAF(II)70; Short=TAFII-70; Short=TAFII70
gi|46250328|gb|AAH68776.1| LOC397724 protein [Xenopus laevis]
Length = 618
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/322 (57%), Positives = 235/322 (72%), Gaps = 10/322 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL P DID AL +KN+EPIYG +FLPF++ASGGGRELHF +EKE D
Sbjct: 52 ALKFMHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETD 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D+++ P+ L+ L+ HWL+IEGVQP +PENPPPV K QK E+ +P+
Sbjct: 112 LSDIISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQE 171
Query: 243 ----GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG 298
GK GK K L + +K + HELSVEQQLYYKEITEACVGS E
Sbjct: 172 EGLPGKGQGSGEGKGKEKKTAILEGAP-LKLKPRSIHELSVEQQLYYKEITEACVGSCEA 230
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
+R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYL
Sbjct: 231 KRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYL 290
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
EKYLHEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ KNF+T+TNNIQ+R+T+
Sbjct: 291 EKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITK 350
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
+ D + + + YG+IAG
Sbjct: 351 TFTKTWVDDRTPWTTRYGSIAG 372
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 29/153 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
I T ESMKVI+ES+GI + ++ + L+ +++ K + Q
Sbjct: 7 IGNTLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTP 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
PIYG +FLPF++ASGGGRELHF +EKE D D+++ P+ L+
Sbjct: 67 SDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLD 126
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ HWL+IEGVQP +PENPPPV K QK E+
Sbjct: 127 VSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEA 159
>gi|11991529|emb|CAC19673.1| TAFII70 protein [Pleurodeles waltl]
Length = 649
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 240/326 (73%), Gaps = 14/326 (4%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K MS KR KL DID AL +KN+EP+YG T ++F+PF++ASGGGREL+F DEKEVD
Sbjct: 54 ALKFMSVGKRQKLTTCDIDSALRLKNVEPLYGFTANEFIPFRYASGGGRELYFYDEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
D++ P+ L+ L+ HWL+IEGVQP +PENPPP K QK E+ +P+ +
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGVQPAIPENPPPAPKQ-QKAEATEPLKAVKPGQD 172
Query: 248 DTS---GKPTSAKLEKLRNVET---------VHVKQLATHELSVEQQLYYKEITEACVGS 295
+ S GK SA + E + +K + HELSVEQQLYYKEITEACVGS
Sbjct: 173 EGSPLKGKGQSAITPDGKGKEKKPPVLKEGPLRLKPRSIHELSVEQQLYYKEITEACVGS 232
Query: 296 DEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQS 355
E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +
Sbjct: 233 CEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPT 292
Query: 356 LYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFN-TSTNNIQT 414
LYLEKYLHEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ KNFN T+TNNIQ+
Sbjct: 293 LYLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFNATTTNNIQS 352
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 353 RITKTFTKSWVDDKTAWTTRYGSIAG 378
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 90/155 (58%), Gaps = 30/155 (19%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
+ + T F ESMKVIAESIGI +P++ + L++ ++Y K I Q
Sbjct: 7 LKLGNTLFPTESMKVIAESIGISQVPEETCQLLTEEVSYRIKEITQDALKFMSVGKRQKL 66
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG T ++F+PF++ASGGGREL+F DEKEVD D++ P+
Sbjct: 67 TTCDIDSALRLKNVEPLYGFTANEFIPFRYASGGGRELYFYDEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEGVQP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGVQPAIPENPPPAPKQ-QKAEA 160
>gi|395852787|ref|XP_003798913.1| PREDICTED: transcription initiation factor TFIID subunit 6
[Otolemur garnettii]
Length = 677
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 233/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ T GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATPTDGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|395533667|ref|XP_003768876.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Sarcophilus harrisii]
Length = 668
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 237/326 (72%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 44 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 103
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKK 245
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G++
Sbjct: 104 LSDIINTPLPRVPLDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 163
Query: 246 D-----------KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ T GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 164 EDGPLKGKGQGVASTDGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 223
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 224 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 283
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 284 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 343
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 344 RITKTFTKSWVDEKTPWTTRYGSIAG 369
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 19/145 (13%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSD------------------NITYCCK 42
+ + T ESMKV+AES+GI +P++ + L+D +I Y K
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQMPEETCQLLTDEDALKFMHMGKRQKLTTSDIDYALK 66
Query: 43 VI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ HWL
Sbjct: 67 LKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWL 126
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+IEG QP +PENPPP K QK E+
Sbjct: 127 SIEGFQPAIPENPPPAPKEQQKAEA 151
>gi|395533665|ref|XP_003768875.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Sarcophilus harrisii]
Length = 678
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 237/326 (72%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKK 245
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G++
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 246 D-----------KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ T GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGVASTDGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI +P++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQMPEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEA 161
>gi|62752037|ref|NP_001015525.1| transcription initiation factor TFIID subunit 6 [Bos taurus]
gi|61553904|gb|AAX46477.1| TBP-associated factor 6 isoform alpha [Bos taurus]
gi|296472919|tpg|DAA15034.1| TPA: TBP-associated factor 6 [Bos taurus]
Length = 678
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|332866935|ref|XP_003339456.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Pan troglodytes]
gi|332866937|ref|XP_001139475.2| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Pan troglodytes]
gi|332866941|ref|XP_003318660.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Pan troglodytes]
gi|397489544|ref|XP_003815785.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Pan paniscus]
gi|397489546|ref|XP_003815786.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Pan paniscus]
gi|397489550|ref|XP_003815788.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Pan paniscus]
Length = 677
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|5032147|ref|NP_005632.1| transcription initiation factor TFIID subunit 6 isoform alpha [Homo
sapiens]
gi|21536359|ref|NP_647476.1| transcription initiation factor TFIID subunit 6 isoform alpha [Homo
sapiens]
gi|1729810|sp|P49848.1|TAF6_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=RNA polymerase II TBP-associated factor
subunit E; AltName: Full=Transcription initiation factor
TFIID 70 kDa subunit; Short=TAF(II)70; Short=TAFII-70;
Short=TAFII70; AltName: Full=Transcription initiation
factor TFIID 80 kDa subunit; Short=TAF(II)80;
Short=TAFII-80; Short=TAFII80
gi|437385|gb|AAA63643.1| TAFII70 [Homo sapiens]
gi|1136306|gb|AAA84390.1| TAFII80 [Homo sapiens]
gi|17390254|gb|AAH18115.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|23266704|gb|AAN10295.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|51094599|gb|EAL23851.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|119596995|gb|EAW76589.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|119596997|gb|EAW76591.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|119596998|gb|EAW76592.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|123981418|gb|ABM82538.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [synthetic construct]
gi|123996257|gb|ABM85730.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [synthetic construct]
gi|261860128|dbj|BAI46586.1| Transcription initiation factor TFIID subunit 6 [synthetic
construct]
Length = 677
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|301790893|ref|XP_002930450.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 1 [Ailuropoda melanoleuca]
gi|281347883|gb|EFB23467.1| hypothetical protein PANDA_020897 [Ailuropoda melanoleuca]
Length = 678
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|348568860|ref|XP_003470216.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cavia porcellus]
Length = 707
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 233/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 83 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 142
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 143 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 202
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L ++ +K + HELSVEQQLYYKEITEACVG
Sbjct: 203 EDGPLKGKGQGATPADGKGKEKKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVG 262
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 263 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 322
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 323 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 382
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 383 RITKTFTKSWVDEKTPWTTRYGSIAG 408
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 36 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 95
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 96 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 155
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 156 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 190
>gi|344307803|ref|XP_003422568.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Loxodonta africana]
Length = 725
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 101 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 160
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 161 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 220
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 221 EDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 280
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 281 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 340
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 341 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 400
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 401 RITKTFTKSWVDEKTPWTTRYGSIAG 426
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 54 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 113
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 114 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 173
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 174 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 208
>gi|51094601|gb|EAL23853.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
Length = 667
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 44 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 103
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 104 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 163
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 164 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 223
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 224 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 283
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 284 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 343
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 344 RITKTFTKSWVDEKTPWTTRYGSIAG 369
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 19/145 (13%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSD------------------NITYCCK 42
+ + T ESMKV+AES+GI + ++ + L+D +I Y K
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEDALKFMHMGKRQKLTTSDIDYALK 66
Query: 43 VI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ HWL
Sbjct: 67 LKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWL 126
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+IEG QP +PENPPP K QK E+
Sbjct: 127 SIEGCQPAIPENPPPAPKEQQKAEA 151
>gi|332866939|ref|XP_003318659.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Pan troglodytes]
gi|397489548|ref|XP_003815787.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Pan paniscus]
Length = 714
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 91 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 150
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 151 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 210
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 211 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 270
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 271 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 330
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 331 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 390
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 391 RITKTFTKSWVDEKTPWTTRYGSIAG 416
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 44 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 103
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 104 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 163
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 164 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 198
>gi|402862990|ref|XP_003895820.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Papio anubis]
gi|402862992|ref|XP_003895821.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Papio anubis]
gi|402862998|ref|XP_003895824.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Papio anubis]
gi|355560492|gb|EHH17178.1| hypothetical protein EGK_13513 [Macaca mulatta]
gi|355747541|gb|EHH52038.1| hypothetical protein EGM_12403 [Macaca fascicularis]
Length = 678
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 234/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 ------GKKDKDTS--GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
GK T+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|51094600|gb|EAL23852.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
Length = 667
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|298676520|ref|NP_001177344.1| transcription initiation factor TFIID subunit 6 isoform epsilon
[Homo sapiens]
gi|194390122|dbj|BAG61823.1| unnamed protein product [Homo sapiens]
Length = 714
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 91 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 150
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 151 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 210
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 211 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 270
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 271 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 330
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 331 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 390
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 391 RITKTFTKSWVDEKTPWTTRYGSIAG 416
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 44 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 103
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 104 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 163
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 164 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 198
>gi|73957898|ref|XP_546964.2| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Canis lupus familiaris]
Length = 678
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 236/326 (72%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKK 245
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G++
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 246 DKD-----------TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKAQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|301790895|ref|XP_002930451.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 2 [Ailuropoda melanoleuca]
Length = 668
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 44 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 103
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 104 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 163
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 164 EDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 223
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 224 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 283
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 284 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 343
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 344 RITKTFTKSWVDEKTPWTTRYGSIAG 369
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 19/145 (13%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSD------------------NITYCCK 42
+ + T ESMKV+AES+GI + ++ + L+D +I Y K
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEDALKFMHMGKRQKLTTSDIDYALK 66
Query: 43 VI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ HWL
Sbjct: 67 LKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWL 126
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+IEG QP +PENPPP K QK E+
Sbjct: 127 SIEGCQPAIPENPPPAPKEQQKAEA 151
>gi|6678215|ref|NP_033341.1| transcription initiation factor TFIID subunit 6 [Mus musculus]
gi|3024691|sp|Q62311.1|TAF6_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=Transcription initiation factor TFIID 70
kDa subunit; Short=TAF(II)70; Short=TAFII-70;
Short=TAFII70; AltName: Full=Transcription initiation
factor TFIID 80 kDa subunit; Short=TAF(II)80;
Short=TAFII-80; Short=TAFII80; AltName: Full=p80
gi|1372971|dbj|BAA08417.1| TFIID subunit p80 [Mus musculus]
gi|35193204|gb|AAH58583.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|148687260|gb|EDL19207.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Mus musculus]
gi|148687261|gb|EDL19208.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Mus musculus]
Length = 678
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 231/326 (70%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|3024673|sp|Q63801.1|TAF6_RAT RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=Transcription initiation factor TFIID 70
kDa subunit; Short=TAF(II)70; Short=TAFII70; AltName:
Full=Transcription initiation factor TFIID 80 kDa
subunit; Short=TAF(II)80; Short=TAFII-80; Short=TAFII80;
AltName: Full=p80
gi|1109650|dbj|BAA08435.1| TFIID subunit p80 [Rattus sp.]
gi|149028526|gb|EDL83898.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149028527|gb|EDL83899.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149028528|gb|EDL83900.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
Length = 678
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 231/326 (70%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|417412310|gb|JAA52545.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer, partial [Desmodus
rotundus]
Length = 686
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 62 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 121
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 122 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 181
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 182 EDGPLKGKGQGATPADGKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVG 241
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 242 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 301
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 302 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 361
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 362 RITKTFTKSWVDEKTPWTTRYGSIAG 387
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 15 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 74
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 75 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 134
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 135 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 169
>gi|148687262|gb|EDL19209.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_b [Mus musculus]
Length = 681
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 231/326 (70%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 57 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 116
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 117 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 176
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L +K + HELSVEQQLYYKEITEACVG
Sbjct: 177 EDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVG 236
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 237 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 296
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 297 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 356
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 357 RITKTFTKSWVDEKTPWTTRYGSIAG 382
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 10 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 69
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 70 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 129
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 130 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 164
>gi|351695509|gb|EHA98427.1| Transcription initiation factor TFIID subunit 6 [Heterocephalus
glaber]
Length = 677
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 238/325 (73%), Gaps = 12/325 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKK 245
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G++
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 246 -DKDTSGKPTSA---------KLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS 295
D GK A K L ++ +K + HELSVEQQLYYKEITEACVGS
Sbjct: 174 EDGPLKGKGQGATPADSKGKFKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVGS 233
Query: 296 DEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQS 355
E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +
Sbjct: 234 CEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPT 293
Query: 356 LYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR 415
LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R
Sbjct: 294 LYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSR 353
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
+T+ + + D K + + YG+IAG
Sbjct: 354 ITKTFTKSWVDEKTPWTTRYGSIAG 378
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|402862996|ref|XP_003895823.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Papio anubis]
Length = 734
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 234/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 110 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 169
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 170 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 229
Query: 243 ------GKKDKDTS--GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
GK T+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 230 EDGPLKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 289
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 290 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 349
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 350 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 409
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 410 RITKTFTKSWVDEKTPWTTRYGSIAG 435
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 63 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 122
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 123 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 182
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 183 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 217
>gi|410984414|ref|XP_003998523.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Felis
catus]
Length = 678
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 238/326 (73%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGK- 244
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 245 -----KDKDTSGKPTSAKLEK-----LRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
K K P +K ++ L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAPADSKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|149757698|ref|XP_001505099.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Equus caballus]
Length = 678
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|334323236|ref|XP_001372137.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Monodelphis domestica]
Length = 767
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 142 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 201
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 202 LSDIINTPLPRVPLDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 261
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 262 EDGPLKGKGQGAATADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 321
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 322 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 381
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 382 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 441
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 442 RITKTFTKSWVDEKTPWTTRYGSIAG 467
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI +P++ + L+D ++Y K I
Sbjct: 95 LKLSNTVLPSESMKVVAESMGIAQMPEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 154
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 155 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 214
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 215 LDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEA 249
>gi|119596994|gb|EAW76588.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_a [Homo sapiens]
Length = 667
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|444724247|gb|ELW64857.1| Transcription initiation factor TFIID subunit 6 [Tupaia chinensis]
Length = 678
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 238/326 (73%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGK- 244
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 245 -----KDKDTSGKPTSAKLEK-----LRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
K K P +K ++ L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAPADSKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|402862994|ref|XP_003895822.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Papio anubis]
Length = 775
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 234/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 151 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 210
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 211 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 270
Query: 243 ------GKKDKDTS--GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
GK T+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 271 EDGPLKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 330
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 331 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 390
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 391 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 450
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 451 RITKTFTKSWVDEKTPWTTRYGSIAG 476
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I Q
Sbjct: 104 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 163
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 164 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 223
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 224 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 258
>gi|426357184|ref|XP_004045927.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Gorilla gorilla gorilla]
Length = 734
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 111 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 170
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 171 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 230
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 231 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 290
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 291 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 350
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 351 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 410
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 411 RITKTFTKSWVDEKTPWTTRYGSIAG 436
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 64 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 123
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 124 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 183
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 184 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 218
>gi|50949874|emb|CAH10485.1| hypothetical protein [Homo sapiens]
Length = 677
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK + L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGATTADGKGKEKEAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|112984254|ref|NP_001037690.1| transcription initiation factor TFIID subunit 6 [Rattus norvegicus]
gi|71679743|gb|AAI00109.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Rattus norvegicus]
Length = 647
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 231/326 (70%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|390459096|ref|XP_002744053.2| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6 [Callithrix jacchus]
Length = 731
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 237/326 (72%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 107 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 166
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKK 245
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G++
Sbjct: 167 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 226
Query: 246 -DKDTSGKPTSAKLEKLRNVET----------VHVKQLATHELSVEQQLYYKEITEACVG 294
D GK A + E + +K + HELSVEQQLYYKEITEACVG
Sbjct: 227 EDGPLKGKGQGAAAADSKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVG 286
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 287 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 346
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 347 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 406
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 407 RITKTFTKSWVDEKTPWTTRYGSIAG 432
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 60 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 119
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 120 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 179
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 180 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 214
>gi|154757685|gb|AAI51670.1| TAF6 protein [Bos taurus]
Length = 439
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 232/326 (71%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|115910612|ref|XP_781123.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/320 (55%), Positives = 234/320 (73%), Gaps = 9/320 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M H+KRVKL D D L ++NIE +YG + + +PF+ ASGGGRELHF +EKE+D
Sbjct: 54 KFMKHAKRVKLSTADFDHTLRVQNIESLYGFSTEEHIPFRFASGGGRELHFVEEKELDLS 113
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID------PISKLG 243
D++ + PK L+ L+ HWL+IEG QP +PENPPPVD QK+ES D P +K
Sbjct: 114 DIINSSMPKIPLDVSLKAHWLSIEGTQPAIPENPPPVDTHTQKVESQDALRTKKPTAKAE 173
Query: 244 KKD-KDTSGKPTSAKLEKLRNVET--VHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
KK K GK + L K + + + V +K + HELSVEQQLYYKEITEACVGS E +R
Sbjct: 174 KKSGKGDMGKTAATLLAKAKGLTSDPVKLKGVLVHELSVEQQLYYKEITEACVGSSETKR 233
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
EAL SLA+DPGL++++PR FIAEGVKVNVVQNNLA+LIYLMRMVKAL+DN +LYLEK
Sbjct: 234 AEALHSLASDPGLYQVVPRFSMFIAEGVKVNVVQNNLAILIYLMRMVKALMDNVTLYLEK 293
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
YLHEL+P++++C+VS+QL RP+ADNHWALRDFA+RL+ + + F+T+TNN+Q R+++
Sbjct: 294 YLHELIPAVMTCVVSRQLSLRPDADNHWALRDFAARLMASMCRKFSTTTNNMQARISKTF 353
Query: 421 SNAINDPKINFPSLYGAIAG 440
+++ K ++YGA+ G
Sbjct: 354 DESLSKDKAPLATIYGALVG 373
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 29/145 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
ES+KVI E +G+ +L ++A L+D++T+ K+++Q
Sbjct: 15 ESIKVIGECVGVSSLNEEAGTLLADDVTFRLKMMVQEAAKFMKHAKRVKLSTADFDHTLR 74
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
+YG + + +PF+ ASGGGRELHF +EKE+D D++ + PK L+ L+ HWL
Sbjct: 75 VQNIESLYGFSTEEHIPFRFASGGGRELHFVEEKELDLSDIINSSMPKIPLDVSLKAHWL 134
Query: 102 AIEGVQPTVPENPPPVDKSAQKLES 126
+IEG QP +PENPPPVD QK+ES
Sbjct: 135 SIEGTQPAIPENPPPVDTHTQKVES 159
>gi|403285894|ref|XP_003934245.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Saimiri boliviensis boliviensis]
gi|403285896|ref|XP_003934246.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Saimiri boliviensis boliviensis]
gi|403285898|ref|XP_003934247.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Saimiri boliviensis boliviensis]
Length = 678
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 237/326 (72%), Gaps = 13/326 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKK 245
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G++
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 246 -DKDTSGKPTSAKLEKLRNVET----------VHVKQLATHELSVEQQLYYKEITEACVG 294
D GK A + E + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAATADSKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 293
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 294 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 353
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 354 RITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|156395880|ref|XP_001637338.1| predicted protein [Nematostella vectensis]
gi|156224449|gb|EDO45275.1| predicted protein [Nematostella vectensis]
Length = 662
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 236/336 (70%), Gaps = 17/336 (5%)
Query: 122 QKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFT 181
++L S K M SKR KL+ DID+AL ++N+EP+YG F+PF+ ASGGGRE+ F
Sbjct: 50 KQLTQESSKFMQKSKRKKLMTKDIDNALRLQNVEPLYGFVAQDFIPFRFASGGGREVFFY 109
Query: 182 DEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI-- 239
D+ E+D D++ P+ ++ L+ HWL+IEG+QP +PENPPP K E P+
Sbjct: 110 DDPEIDLNDVINTQLPRIPVDVSLKAHWLSIEGLQPAIPENPPPALADQLKREEQKPVFT 169
Query: 240 -------SKLGKK------DKDTSGKPTSAK--LEKLRNVETVHVKQLATHELSVEQQLY 284
+K G+K D ++ KP K + + + + K L THELSVEQQLY
Sbjct: 170 TKAAPDKTKPGQKRPKAEVDSKSNKKPAITKHTISSIPSNKADKTKGLVTHELSVEQQLY 229
Query: 285 YKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM 344
YKEITEACVGS E RR EALQSLATDPGL++MLPR CTFI+EGV+VNV QNNL LLIYLM
Sbjct: 230 YKEITEACVGSCESRRTEALQSLATDPGLYQMLPRFCTFISEGVRVNVAQNNLVLLIYLM 289
Query: 345 RMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKN 404
RMVKALLDN +L+LEKYLHE++P++++C+VSKQLC +PE DNHWALRDF +RL+ Q+ ++
Sbjct: 290 RMVKALLDNSTLFLEKYLHEMIPAVVTCVVSKQLCPKPEVDNHWALRDFGARLVAQICRS 349
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
FN++TN++QTRVT+ A++ K + YGAI G
Sbjct: 350 FNSTTNSVQTRVTKTYCKALHQEKAPLATHYGAITG 385
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 29/135 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
ES+KVIAESIG+ NL +A L + TY K + Q
Sbjct: 19 ESIKVIAESIGVRNLNHEAIGTLMEEGTYRLKQLTQESSKFMQKSKRKKLMTKDIDNALR 78
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG F+PF+ ASGGGRE+ F D+ E+D D++ P+ ++ L+ HWL
Sbjct: 79 LQNVEPLYGFVAQDFIPFRFASGGGREVFFYDDPEIDLNDVINTQLPRIPVDVSLKAHWL 138
Query: 102 AIEGVQPTVPENPPP 116
+IEG+QP +PENPPP
Sbjct: 139 SIEGLQPAIPENPPP 153
>gi|354496707|ref|XP_003510467.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cricetulus griseus]
gi|344248936|gb|EGW05040.1| Transcription initiation factor TFIID subunit 6 [Cricetulus
griseus]
Length = 678
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 233/327 (71%), Gaps = 15/327 (4%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+ K K +
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPL-KSAKPGQ 172
Query: 248 DTSG--------------KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV 293
+ G K K L +K + HELSVEQQLYYKEITEACV
Sbjct: 173 EEDGPLKGKGQGAAAADAKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACV 232
Query: 294 GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
GS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 233 GSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDN 292
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ
Sbjct: 293 PTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQ 352
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
+R+T+ + + D K + + YG+IAG
Sbjct: 353 SRITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|441649872|ref|XP_004093341.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6, partial [Nomascus leucogenys]
Length = 607
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 228/308 (74%), Gaps = 13/308 (4%)
Query: 146 DDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 205
D AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L
Sbjct: 1 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 60
Query: 206 RTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGKKDKDT-----------SGK 252
+ HWL+IEG QP +PENPPP K QK E+ +P+ +K G+++ T GK
Sbjct: 61 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGTLKGKGQGATTADGK 120
Query: 253 PTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPG 312
K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+ATDPG
Sbjct: 121 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPG 180
Query: 313 LHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSC 372
L++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P++++C
Sbjct: 181 LYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTC 240
Query: 373 IVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFP 432
IVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K +
Sbjct: 241 IVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWT 300
Query: 433 SLYGAIAG 440
+ YG+IAG
Sbjct: 301 TRYGSIAG 308
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ HWL+IE
Sbjct: 9 VEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIE 68
Query: 105 GVQPTVPENPPPVDKSAQKLES 126
G QP +PENPPP K QK E+
Sbjct: 69 GCQPAIPENPPPAPKEQQKAEA 90
>gi|291411249|ref|XP_002721901.1| PREDICTED: TBP-associated factor 6 isoform 2 [Oryctolagus
cuniculus]
Length = 668
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 222/305 (72%), Gaps = 13/305 (4%)
Query: 149 LNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 208
+++KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ H
Sbjct: 75 MSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAH 134
Query: 209 WLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL-------------GKKDKDTSGKPTS 255
WL+IEG QP +PENPPP K QK E+ +P+ G+ GK
Sbjct: 135 WLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGKGKE 194
Query: 256 AKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHE 315
K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+ATDPGL++
Sbjct: 195 KKAPPLLEGTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQ 254
Query: 316 MLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVS 375
MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS
Sbjct: 255 MLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVS 314
Query: 376 KQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLY 435
+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K + + Y
Sbjct: 315 RQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRY 374
Query: 436 GAIAG 440
G+IAG
Sbjct: 375 GSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQVAGAFRPGCRLGPL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 LPPGLGLMMSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|291411247|ref|XP_002721900.1| PREDICTED: TBP-associated factor 6 isoform 1 [Oryctolagus
cuniculus]
Length = 678
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 222/305 (72%), Gaps = 13/305 (4%)
Query: 149 LNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 208
+++KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ H
Sbjct: 75 MSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAH 134
Query: 209 WLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL-------------GKKDKDTSGKPTS 255
WL+IEG QP +PENPPP K QK E+ +P+ G+ GK
Sbjct: 135 WLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGKGKE 194
Query: 256 AKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHE 315
K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+ATDPGL++
Sbjct: 195 KKAPPLLEGTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQ 254
Query: 316 MLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVS 375
MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS
Sbjct: 255 MLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVS 314
Query: 376 KQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLY 435
+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K + + Y
Sbjct: 315 RQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRY 374
Query: 436 GAIAG 440
G+IAG
Sbjct: 375 GSIAG 379
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQVAGAFRPGCRLGPL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 LPPGLGLMMSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|449676272|ref|XP_002168543.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Hydra magnipapillata]
Length = 496
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 235/337 (69%), Gaps = 23/337 (6%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEK 184
E++ F+ + SKR+KL DID +L ++N+EP+YG + S F+PF++ASGGGRE++F +E
Sbjct: 58 EAVKFQ--NKSKRLKLTSRDIDHSLKVQNVEPVYGFSSSDFVPFRNASGGGREVYFKEET 115
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP------ 238
EVD ED+++ PK LE +++HWLAI+G+QP +PENPPP+ K Q E
Sbjct: 116 EVDLEDIISQNLPKIPLEVTIKSHWLAIDGIQPAIPENPPPISKDMQMQEVASAFANPAV 175
Query: 239 ----ISKLGKKDKDTSGKPTSAKLEKLRNVETV-----------HVKQLATHELSVEQQL 283
I+ + +K + + + VE K L THELSVEQQL
Sbjct: 176 CEVNITDFSQDNKSQLKDIKTKDSKDKKKVEDTKKLDFGKQEIKRFKPLVTHELSVEQQL 235
Query: 284 YYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
+YKEITEACVGS+E +R EAL SL+ DPGL+++LPR TFIAEGVKVNV Q+NLALLIYL
Sbjct: 236 FYKEITEACVGSNEVKRTEALNSLSNDPGLYQLLPRFTTFIAEGVKVNVGQHNLALLIYL 295
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
+RM+KAL++N +LY+EKYLHEL+P++++C+VSKQLC RP+ DNHWALRDFA+RLL Q+ K
Sbjct: 296 LRMIKALMENSTLYIEKYLHELIPAVITCVVSKQLCPRPDFDNHWALRDFAARLLAQICK 355
Query: 404 NFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+F T TNNIQ+RVT+ L + K S YGA+AG
Sbjct: 356 HFTTPTNNIQSRVTKALCKTLFLDKAPAASHYGAVAG 392
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 29/156 (18%)
Query: 2 DIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------- 46
+I ++F+ E +KVI ES PDD + L+DNIT+ K +IQ
Sbjct: 13 EIVDSAFTSEIIKVIVESNSYDKPPDDVLQYLADNITFKVKKVIQEAVKFQNKSKRLKLT 72
Query: 47 --------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
P+YG + S F+PF++ASGGGRE++F +E EVD ED+++ PK L
Sbjct: 73 SRDIDHSLKVQNVEPVYGFSSSDFVPFRNASGGGREVYFKEETEVDLEDIISQNLPKIPL 132
Query: 93 ETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
E +++HWLAI+G+QP +PENPPP+ K Q E S
Sbjct: 133 EVTIKSHWLAIDGIQPAIPENPPPISKDMQMQEVAS 168
>gi|198427195|ref|XP_002127739.1| PREDICTED: similar to Transcription initiation factor TFIID subunit
6 (Transcription initiation factor TFIID 70 kDa subunit)
(TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (p80) [Ciona
intestinalis]
Length = 557
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 229/325 (70%), Gaps = 19/325 (5%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K SH K KL DID+ L KN EP+YG +F+PF+ ASGGGRELHF +EKE+D
Sbjct: 61 AVKFCSHRKSNKLTCQDIDNTLKSKNQEPLYGFISDEFIPFRFASGGGRELHFIEEKELD 120
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
D++ + PK + ++ HWLAIEGVQP+VPENP P + SID + K K+
Sbjct: 121 LNDIINGVLPKIPHDVAMKAHWLAIEGVQPSVPENPVP-----ETHFSIDVLKKPEVKNV 175
Query: 248 DT-----------SGKP-TSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS 295
T + P TSAK K + V +K THELSVEQQLYYKEITEA VGS
Sbjct: 176 RTGVDALKSCTVPNNNPLTSAK--KPESSSLVPLKARFTHELSVEQQLYYKEITEAAVGS 233
Query: 296 DEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQS 355
E RR EALQSLATDPGL +MLPR TF++EGV+VNVVQNNLALLIYLMRMVKAL+DN +
Sbjct: 234 SEARRAEALQSLATDPGLSQMLPRFSTFVSEGVRVNVVQNNLALLIYLMRMVKALMDNST 293
Query: 356 LYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR 415
L LEKYLHE++P++++CIVS+QLC RP+ DNHWALRD+A+RL+ QV ++F+TSTN IQ+R
Sbjct: 294 LNLEKYLHEMIPAVMTCIVSRQLCTRPDVDNHWALRDYAARLMAQVCRSFSTSTNLIQSR 353
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
+T ++D K + + YG++AG
Sbjct: 354 ITGTFCKCLHDDKSSLAARYGSVAG 378
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 78/138 (56%), Gaps = 29/138 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS++++K I E+ GI LPD A K LS+ T+ K IIQ
Sbjct: 21 FSVDTVKAIGETAGILQLPDHATKYLSEETTFRLKEIIQDAVKFCSHRKSNKLTCQDIDN 80
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P+YG +F+PF+ ASGGGRELHF +EKE+D D++ + PK + ++
Sbjct: 81 TLKSKNQEPLYGFISDEFIPFRFASGGGRELHFIEEKELDLNDIINGVLPKIPHDVAMKA 140
Query: 99 HWLAIEGVQPTVPENPPP 116
HWLAIEGVQP+VPENP P
Sbjct: 141 HWLAIEGVQPSVPENPVP 158
>gi|193783615|dbj|BAG53526.1| unnamed protein product [Homo sapiens]
Length = 601
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/312 (53%), Positives = 217/312 (69%), Gaps = 12/312 (3%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 192 LTNLNPKSALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESID-PISKLGKKDKD 248
+ P+ L+ L+ E +P KSA+ + D P+ G+
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPL---------KSAKPGQEEDGPLKGKGQGATT 111
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
GK K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+A
Sbjct: 112 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA 171
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
TDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P+
Sbjct: 172 TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPA 231
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K
Sbjct: 232 VMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEK 291
Query: 429 INFPSLYGAIAG 440
+ + YG+IAG
Sbjct: 292 TPWTTRYGSIAG 303
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 8 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 67
Query: 90 SALETHLR 97
L+ L+
Sbjct: 68 VPLDVCLK 75
>gi|332866943|ref|XP_003318661.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Pan troglodytes]
gi|397489552|ref|XP_003815789.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Pan paniscus]
Length = 601
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/312 (53%), Positives = 217/312 (69%), Gaps = 12/312 (3%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 192 LTNLNPKSALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESID-PISKLGKKDKD 248
+ P+ L+ L+ E +P KSA+ + D P+ G+
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPL---------KSAKPGQEEDGPLKGKGQGATT 111
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
GK K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+A
Sbjct: 112 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA 171
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
TDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P+
Sbjct: 172 TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPA 231
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K
Sbjct: 232 VMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEK 291
Query: 429 INFPSLYGAIAG 440
+ + YG+IAG
Sbjct: 292 TPWTTRYGSIAG 303
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 8 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 67
Query: 90 SALETHLR 97
L+ L+
Sbjct: 68 VPLDVCLK 75
>gi|426357186|ref|XP_004045928.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Gorilla gorilla gorilla]
Length = 601
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/312 (53%), Positives = 217/312 (69%), Gaps = 12/312 (3%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 192 LTNLNPKSALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESID-PISKLGKKDKD 248
+ P+ L+ L+ E +P KSA+ + D P+ G+
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPL---------KSAKPGQEEDGPLKGKGQGATT 111
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
GK K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+A
Sbjct: 112 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA 171
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
TDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P+
Sbjct: 172 TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPA 231
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K
Sbjct: 232 VMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEK 291
Query: 429 INFPSLYGAIAG 440
+ + YG+IAG
Sbjct: 292 TPWTTRYGSIAG 303
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 8 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 67
Query: 90 SALETHLR 97
L+ L+
Sbjct: 68 VPLDVCLK 75
>gi|402863000|ref|XP_003895825.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
6 [Papio anubis]
Length = 602
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 166/312 (53%), Positives = 217/312 (69%), Gaps = 12/312 (3%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 192 LTNLNPKSALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESID-PISKLGKKDKD 248
+ P+ L+ L+ E +P KSA+ + D P+ G+
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPL---------KSAKPGQEEDGPLKGKGQGATA 111
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
GK K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+A
Sbjct: 112 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA 171
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
TDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P+
Sbjct: 172 TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPA 231
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K
Sbjct: 232 VMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEK 291
Query: 429 INFPSLYGAIAG 440
+ + YG+IAG
Sbjct: 292 TPWTTRYGSIAG 303
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 8 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 67
Query: 90 SALETHLR 97
L+ L+
Sbjct: 68 VPLDVCLK 75
>gi|403285900|ref|XP_003934248.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Saimiri boliviensis boliviensis]
Length = 602
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/312 (52%), Positives = 216/312 (69%), Gaps = 12/312 (3%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 192 LTNLNPKSALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESID-PISKLGKKDKD 248
+ P+ L+ L+ E +P KSA+ + D P+ G+
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPL---------KSAKPGQEEDGPLKGKGQGAAT 111
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
K K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+A
Sbjct: 112 ADSKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA 171
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
TDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P+
Sbjct: 172 TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPA 231
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K
Sbjct: 232 VMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEK 291
Query: 429 INFPSLYGAIAG 440
+ + YG+IAG
Sbjct: 292 TPWTTRYGSIAG 303
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 8 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 67
Query: 90 SALETHLR 97
L+ L+
Sbjct: 68 VPLDVCLK 75
>gi|431898257|gb|ELK06952.1| Transcription initiation factor TFIID subunit 6 [Pteropus alecto]
Length = 652
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/326 (48%), Positives = 208/326 (63%), Gaps = 39/326 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 173
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 174 EDGPLKGKGQGAAPAEGKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVG 233
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R V+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 234 SCEAKR--------------------------AVRVNVVQNNLALLIYLMRMVKALMDNP 267
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 268 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 327
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 328 RITKTFTKSWVDEKTPWTTRYGSIAG 353
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI---------------- 44
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 45 -------------IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 127 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>gi|260796579|ref|XP_002593282.1| hypothetical protein BRAFLDRAFT_83827 [Branchiostoma floridae]
gi|229278506|gb|EEN49293.1| hypothetical protein BRAFLDRAFT_83827 [Branchiostoma floridae]
Length = 653
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 212/317 (66%), Gaps = 30/317 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M H KR KL D D+AL +KN+EP+YG + +PF+ ASGGGRELHF +EKEV+
Sbjct: 49 AVKFMHHGKRRKLSTADFDNALKLKNVEPLYGFHAEEHIPFRFASGGGRELHFYEEKEVE 108
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP---ISKLGK 244
D++ P+ L+ +L+ HWLAIEGVQP++PENPPPV K Q P GK
Sbjct: 109 LGDIINAPLPRIPLDVNLKAHWLAIEGVQPSIPENPPPVPKEDQHAADRPPGVTAKPPGK 168
Query: 245 KDKDTSGKPTSAKLEKL-RNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
+GKP A+++ L V V +K + THELSVEQQLYY+EITEACVGS E RR
Sbjct: 169 DGTKPAGKPGKAEVKGLPSEVAGVKLKPVLTHELSVEQQLYYREITEACVGSCESRR--- 225
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
V+VNVVQ+NLALLIYLMRMVKAL+DN +L+LEKYLH
Sbjct: 226 -----------------------AVRVNVVQSNLALLIYLMRMVKALMDNTTLHLEKYLH 262
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
E++P++ +CI+SKQLC RP+ DNHWALRDFA+RL+ + +NF+++ NNIQ+R+T+ +
Sbjct: 263 EVIPAVATCILSKQLCQRPDVDNHWALRDFAARLMGNMCRNFSSNINNIQSRMTKTYTKI 322
Query: 424 INDPKINFPSLYGAIAG 440
++D + + + YGA+AG
Sbjct: 323 LHDEQSHLATRYGALAG 339
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 84/144 (58%), Gaps = 29/144 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ ES+KVIAES+GI LPD+AA L+++ TY K I Q
Sbjct: 9 VTAESIKVIAESVGIGQLPDEAAAALAEDATYRLKQITQEAVKFMHHGKRRKLSTADFDN 68
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P+YG + +PF+ ASGGGRELHF +EKEV+ D++ P+ L+ +L+
Sbjct: 69 ALKLKNVEPLYGFHAEEHIPFRFASGGGRELHFYEEKEVELGDIINAPLPRIPLDVNLKA 128
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQ 122
HWLAIEGVQP++PENPPPV K Q
Sbjct: 129 HWLAIEGVQPSIPENPPPVPKEDQ 152
>gi|297287994|ref|XP_002803267.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Macaca mulatta]
Length = 636
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/326 (48%), Positives = 203/326 (62%), Gaps = 55/326 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+E I+G
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEVIWG---------------------------- 85
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 86 --------------DRQGAAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 131
Query: 243 ------GKKDKDTS--GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
GK T+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 132 EDGPLKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 191
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN
Sbjct: 192 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNP 251
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+
Sbjct: 252 TLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQS 311
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ + + D K + + YG+IAG
Sbjct: 312 RITKTFTKSWVDEKTPWTTRYGSIAG 337
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFK 60
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I Q L F
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQ--------DALKFM 58
Query: 61 HASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKS 120
H G ++L +D +D+ L N+ + HWL+IEG QP +PENPPP K
Sbjct: 59 HM-GKRQKLTTSD---IDYALKLKNVEVIWG-DRQGAAHWLSIEGCQPAIPENPPPAPKE 113
Query: 121 AQKLES 126
QK E+
Sbjct: 114 QQKAEA 119
>gi|426255396|ref|XP_004021334.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6, partial [Ovis aries]
Length = 719
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/327 (46%), Positives = 207/327 (63%), Gaps = 17/327 (5%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 100 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 159
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL----- 242
D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E+ +P+
Sbjct: 160 LSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQE 219
Query: 243 --------GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 220 EDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 279
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV-KALLDN 353
S E +R EALQS+ATDPGL++MLPR TFI+EGV+ + L R +A
Sbjct: 280 SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRGH---GRLEWGSGGGRAGEEAHGGP 336
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+ +HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ
Sbjct: 337 PCCPIPAXVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQ 396
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
+R+T+ + + D K + + YG+IAG
Sbjct: 397 SRITKTFTKSWVDEKTPWTTRYGSIAG 423
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 29/155 (18%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I Q
Sbjct: 53 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 112
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 113 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 172
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 173 LDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 207
>gi|313246848|emb|CBY35707.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 208/318 (65%), Gaps = 12/318 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M ++KR +L P D+D AL + IEP+YG T + +LP++ ASGGGRELHF +++E+D
Sbjct: 48 SAKFMRNAKRARLSPRDVDSALRARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREID 107
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP-----PPVDKSAQKLESIDPISKL 242
+ L N K +R HWL I+GVQP +PENP PP D SA+KL D +
Sbjct: 108 LQKFLENTASKLPPPIKIRAHWLVIDGVQPNIPENPAPARKPPHDLSAKKLPE-DLGKED 166
Query: 243 GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE 302
KDK KP + + K L HELS+EQ YY+EIT+A VG +E R E
Sbjct: 167 KGKDKKNEKKPGDKG-----QTQALEQKPLMRHELSIEQMKYYQEITQAAVGRNEEIRKE 221
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
AL SLA D G+H MLPR FI+EG+K N+ +NNLAL+IYLMRMVKALLDN +L L+ YL
Sbjct: 222 ALNSLAEDTGIHAMLPRFTNFISEGIKCNINENNLALIIYLMRMVKALLDNPTLSLDMYL 281
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
HE++P ++SC+VS+QLC R +NHWALR +A+R+L Q+SKNF T+T+ +QTR+ + L
Sbjct: 282 HEIIPVVISCVVSRQLCQRI-GENHWALRQYAARVLAQISKNFTTTTSMLQTRIVQSLQK 340
Query: 423 AINDPKINFPSLYGAIAG 440
++ +YG+I G
Sbjct: 341 PLDRRDAALAQIYGSIVG 358
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 34/158 (21%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M+ +S ++++K+ ES+GI ++P+DAA+ +++N+ + K IIQ
Sbjct: 1 METEESSIGVQTIKLFGESVGITSIPEDAARHVAENLKFQLKRIIQDSAKFMRNAKRARL 60
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG T + +LP++ ASGGGRELHF +++E+D + L N K
Sbjct: 61 SPRDVDSALRARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREIDLQKFLENTASKLP 120
Query: 92 LETHLRTHWLAIEGVQPTVPENP-----PPVDKSAQKL 124
+R HWL I+GVQP +PENP PP D SA+KL
Sbjct: 121 PPIKIRAHWLVIDGVQPNIPENPAPARKPPHDLSAKKL 158
>gi|313234616|emb|CBY10571.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 208/318 (65%), Gaps = 12/318 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M ++KR +L P D+D AL + IEP+YG T + +LP++ ASGGGRELHF +++E+D
Sbjct: 48 SAKFMRNAKRARLSPRDVDSALRARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREID 107
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP-----PPVDKSAQKLESIDPISKL 242
+ L N K +R HWL I+GVQP +PENP PP D SA+KL D +
Sbjct: 108 LQKFLENTAIKLPPPVKIRAHWLVIDGVQPNIPENPAPARKPPHDLSAKKLPE-DLGKED 166
Query: 243 GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE 302
KDK KP + + K L HELS+EQ YY+EIT+A VG +E R E
Sbjct: 167 KGKDKKNEKKPGDKG-----QTQALEQKPLMRHELSIEQMKYYQEITQAAVGRNEEIRKE 221
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
AL SLA D G+H MLPR FI+EG+K N+ +NNLAL+IYLMRMVKALLDN +L L+ YL
Sbjct: 222 ALNSLAEDTGIHAMLPRFTNFISEGIKCNINENNLALIIYLMRMVKALLDNPTLSLDMYL 281
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
HE++P ++SC+VS+QLC R +NHWALR +A+R+L Q+SKNF T+T+ +QTR+ + L
Sbjct: 282 HEIIPVVISCVVSRQLCQRI-GENHWALRQYAARVLAQISKNFTTTTSMLQTRIVQSLQK 340
Query: 423 AINDPKINFPSLYGAIAG 440
++ +YG+I G
Sbjct: 341 PLDRRDAALAQIYGSIVG 358
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 34/158 (21%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M+ +S ++++K+ ES+GI ++P+DAA+ +++N+ + K IIQ
Sbjct: 1 METEESSIGVQTIKLFGESVGITSIPEDAARHVAENLKFQLKRIIQDSAKFMRNAKRARL 60
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG T + +LP++ ASGGGRELHF +++E+D + L N K
Sbjct: 61 SPRDVDSALRARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREIDLQKFLENTAIKLP 120
Query: 92 LETHLRTHWLAIEGVQPTVPENP-----PPVDKSAQKL 124
+R HWL I+GVQP +PENP PP D SA+KL
Sbjct: 121 PPVKIRAHWLVIDGVQPNIPENPAPARKPPHDLSAKKL 158
>gi|340375218|ref|XP_003386133.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Amphimedon queenslandica]
Length = 593
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 140/321 (43%), Positives = 218/321 (67%), Gaps = 11/321 (3%)
Query: 129 FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDF 188
K M HSKR +L DID+AL KNIEP+YG S+++P +H+SGGG+E+++ D++EVD
Sbjct: 56 IKFMRHSKRNRLSCGDIDNALRSKNIEPLYGFECSEYIPLRHSSGGGKEIYYPDDQEVDL 115
Query: 189 EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKD 248
++++ PK + L +HWLA++GVQP VPEN P + Q+ +++ L +D
Sbjct: 116 VSIVSSPLPKLPCDVSLHSHWLAVDGVQPLVPENVPSLSLEEQRKQAV----ALSLNSQD 171
Query: 249 TSGKPTSAKLEKLRNVETVH------VKQLATHELSVEQQLYYKEITEACVGSDEGRRFE 302
S P +LE+ R E +K L H L++EQQLYYKE+T+ACVG + +R E
Sbjct: 172 ASLVPKDVRLERKRKKEEEGVVEVVKLKSLQPHLLTMEQQLYYKELTDACVGLSDSKRQE 231
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
L SL+TDP ++++LP++ TF+ EG+KVN+ Q LA L L++MVKALLDN S+ +E+YL
Sbjct: 232 GLTSLSTDPSVYQLLPQLITFMTEGIKVNIGQRKLASLRNLLKMVKALLDNTSISIERYL 291
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
H+L+PS+ +C++++ LC RPE+++HW+LR+ ++++L+ + K ++ S NNIQTR+TR+LS
Sbjct: 292 HDLIPSVSTCLLNRHLCTRPESEDHWSLRELSAKILSMICKRYSNSVNNIQTRLTRILSQ 351
Query: 423 AINDPKIN-FPSLYGAIAGEG 442
+ + S YGA+A G
Sbjct: 352 TLQGLTLQELASHYGAVACFG 372
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 31/167 (18%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
S +S+KV+AESIGI NL +D K LS+ + + K I+Q
Sbjct: 15 MSTDSIKVMAESIGISNLNEDVCKRLSEEMEFRLKEIVQNGIKFMRHSKRNRLSCGDIDN 74
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P+YG S+++P +H+SGGG+E+++ D++EVD ++++ PK + L +
Sbjct: 75 ALRSKNIEPLYGFECSEYIPLRHSSGGGKEIYYPDDQEVDLVSIVSSPLPKLPCDVSLHS 134
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDI 145
HWLA++GVQP VPEN P + Q+ ++++ +S+ L+P D+
Sbjct: 135 HWLAVDGVQPLVPENVPSLSLEEQRKQAVALSL--NSQDASLVPKDV 179
>gi|312071628|ref|XP_003138696.1| hypothetical protein LOAG_03111 [Loa loa]
gi|307766142|gb|EFO25376.1| hypothetical protein LOAG_03111 [Loa loa]
Length = 616
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 144/309 (46%), Positives = 205/309 (66%), Gaps = 7/309 (2%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K H +R ++ DID AL M P++G TV + LPF+ A GR+L TD+++V+
Sbjct: 81 KFAVHGRRKRVTAEDIDSALAMDGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDVEIT 140
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
++ K LET++++HWL I+GVQP VPENP PV QK + + + K DT
Sbjct: 141 PVVNAPAAKLPLETNIKSHWLVIDGVQPAVPENPAPV---VQKETPV--VVAIEKATVDT 195
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
S L+ E V +K +TH LSVEQQ+++KEITEA +GSD+ RR EAL SL T
Sbjct: 196 GLSILSKAHRGLQQTEQVQIKTTSTHALSVEQQVFFKEITEAIMGSDDTRRTEALYSLQT 255
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
D GL ++LPR I EGV+ N+VQ+NLA+LIYLMRM+++L +N +L LE+ LHELLPS+
Sbjct: 256 DAGLQQLLPRFSVAIVEGVRCNIVQHNLAILIYLMRMIQSLANNPALSLERCLHELLPSV 315
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
LSCI+S+QLC RPE DNHWALR+F+SRLL + +++ S ++++RVT++L+ D
Sbjct: 316 LSCILSRQLCARPETDNHWALREFSSRLLANICRSYKIS--HLRSRVTQVLAQVWRDENC 373
Query: 430 NFPSLYGAI 438
+LYG++
Sbjct: 374 TLAALYGSL 382
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 29/139 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ I +KV+AES+GI LPD A +++ TY K++I+
Sbjct: 39 YGISYVKVVAESVGIAGLPDVCASQIAVQTTYAVKMVIEHAKKFAVHGRRKRVTAEDIDS 98
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G TV + LPF+ A GR+L TD+++V+ ++ K LET++++
Sbjct: 99 ALAMDGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDVEITPVVNAPAAKLPLETNIKS 158
Query: 99 HWLAIEGVQPTVPENPPPV 117
HWL I+GVQP VPENP PV
Sbjct: 159 HWLVIDGVQPAVPENPAPV 177
>gi|324508063|gb|ADY43409.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 628
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 200/311 (64%), Gaps = 10/311 (3%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K H +R +L+ DIDDAL + P +G + + LPF+ GR+L TD++++D
Sbjct: 89 KFAVHGRRKRLVADDIDDALASRGRPPQFGFSAKEGLPFRLIGSTGRDLFVTDDRDIDLA 148
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
++ K L+ ++ HWL I+G QP VPENP P+ LE ++ + + +
Sbjct: 149 AIVNAPPAKVPLDATIKAHWLVIDGEQPAVPENPTPI------LEEDPTVTSIAEGAEAI 202
Query: 250 SGKPT--SAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
PT S +R E V +K + TH LSVEQQ+++KEITEA +GSD+ RR EAL SL
Sbjct: 203 DFGPTILSQAGRTVRKTEQVQIKTMTTHALSVEQQIFFKEITEAIMGSDDARRTEALHSL 262
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
TD G+ +LPR IAEGV+ N+V +NLA+LIYLMRM+++L N +L L++ LHELLP
Sbjct: 263 QTDAGIQVLLPRFSLAIAEGVRCNIVHHNLAILIYLMRMIQSLASNPALNLDRCLHELLP 322
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
SILSCI+SKQLC RP+ DNHWALR+F+SRLL+ + +++N N +++RVT++L+ +
Sbjct: 323 SILSCILSKQLCARPDTDNHWALREFSSRLLSTICRSYN--VNGLRSRVTQVLTRVWRNE 380
Query: 428 KINFPSLYGAI 438
+LYG++
Sbjct: 381 HCTLSTLYGSL 391
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 29/142 (20%)
Query: 5 GTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------ 46
G F I+ +K+ E+IGI LPDD A +++ + TY K I+
Sbjct: 44 GAEFGIDYVKMAGETIGITGLPDDCASQIAASTTYVFKEIVDQARKFAVHGRRKRLVADD 103
Query: 47 -----------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH 95
P +G + + LPF+ GR+L TD++++D ++ K L+
Sbjct: 104 IDDALASRGRPPQFGFSAKEGLPFRLIGSTGRDLFVTDDRDIDLAAIVNAPPAKVPLDAT 163
Query: 96 LRTHWLAIEGVQPTVPENPPPV 117
++ HWL I+G QP VPENP P+
Sbjct: 164 IKAHWLVIDGEQPAVPENPTPI 185
>gi|432101286|gb|ELK29512.1| Transcription initiation factor TFIID subunit 6 [Myotis davidii]
Length = 611
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 192/313 (61%), Gaps = 54/313 (17%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 54 ALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
D++ P+ L+ L+ K QK E+ +P+
Sbjct: 114 LSDIINTPLPRVPLDVCLK-------------------APKEQQKAEATEPLK------- 147
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
S KP E+ K + +D + EALQS+
Sbjct: 148 --SAKPGQ------------------------EEDGPLKSKGQGAAPADG--KGEALQSI 179
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P
Sbjct: 180 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP 239
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D
Sbjct: 240 AVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDE 299
Query: 428 KINFPSLYGAIAG 440
K + + YG+IAG
Sbjct: 300 KTPWTTRYGSIAG 312
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 29/126 (23%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
+ + T ESMKV+AES+GI + ++ + L+D ++Y K I Q
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKL 66
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 67 TTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVP 126
Query: 92 LETHLR 97
L+ L+
Sbjct: 127 LDVCLK 132
>gi|170595735|ref|XP_001902499.1| Transcription initiation factor TFIID subunit 6 [Brugia malayi]
gi|158589796|gb|EDP28652.1| Transcription initiation factor TFIID subunit 6, putative [Brugia
malayi]
Length = 284
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 180/277 (64%), Gaps = 14/277 (5%)
Query: 134 HSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLT 193
H +R ++ DID A + P++G TV + LPF+ A GR+L TD+++++ ++
Sbjct: 12 HGRRKRVTAEDIDSAFALGGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDIEITPVVN 71
Query: 194 NLNPKSALETHLR---------THWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
K LET+++ HWL I+GVQP VPENP PV QK ++ + K
Sbjct: 72 APAAKLPLETNIKCKCKNNFVSAHWLVIDGVQPAVPENPAPV---VQKEAAV--VVATEK 126
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEAL 304
DT S LR E V +K +TH LSVEQQ+++KEITEA +GSD+ RR EAL
Sbjct: 127 AAVDTGLSILSKACRGLRQTEQVQIKTTSTHALSVEQQVFFKEITEAIMGSDDTRRTEAL 186
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
SL TD GL ++LPR I EGV+ N+VQ+NLA+LIYLMRM+++L +N +L LE+ LHE
Sbjct: 187 YSLQTDAGLQQLLPRFSVVIVEGVRCNIVQHNLAILIYLMRMIQSLANNPALSLERCLHE 246
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
LLPSILSCI+S+QLC RPE DNHWALR+F+SRLL +
Sbjct: 247 LLPSILSCILSRQLCARPETDNHWALREFSSRLLANI 283
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 47 PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR--------- 97
P++G TV + LPF+ A GR+L TD+++++ ++ K LET+++
Sbjct: 34 PLFGFTVKEGLPFRFAGSMGRDLFVTDDRDIEITPVVNAPAAKLPLETNIKCKCKNNFVS 93
Query: 98 THWLAIEGVQPTVPENPPPV 117
HWL I+GVQP VPENP PV
Sbjct: 94 AHWLVIDGVQPAVPENPAPV 113
>gi|355723132|gb|AES07793.1| TAF6 RNA polymerase II, TATA box binding protein -associated
factor, 80kDa [Mustela putorius furo]
Length = 484
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 150/174 (86%)
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAE 326
+ +K + HELSVEQQLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+E
Sbjct: 12 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISE 71
Query: 327 GVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN 386
GV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DN
Sbjct: 72 GVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDN 131
Query: 387 HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
HWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 132 HWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 185
>gi|196004760|ref|XP_002112247.1| hypothetical protein TRIADDRAFT_56085 [Trichoplax adhaerens]
gi|190586146|gb|EDV26214.1| hypothetical protein TRIADDRAFT_56085 [Trichoplax adhaerens]
Length = 1444
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 208/331 (62%), Gaps = 23/331 (6%)
Query: 129 FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDF 188
K M HSKR KL DID AL K+IEP+YG T F+PF++ASGGGR + F ++KE +
Sbjct: 50 LKFMRHSKRDKLTRNDIDLALKFKSIEPVYGFTSRDFVPFRYASGGGRSIFFQEDKEFNL 109
Query: 189 EDLLTNLNP-KSALETHLRTHWLAIEGVQPTVPENPPPVD-KSAQKLESIDPISKLGKKD 246
DL+ + K L+ H R HWL+I+G QP +PENP P ++L S D + K
Sbjct: 110 TDLIASQEASKVPLDNHTRAHWLSIDGTQPLIPENPDPDTLHKFKRLSSDDSLDDFIPKK 169
Query: 247 ----------------KDTSGKPTSAKLEKLRNVETVH-VKQLATHELSVEQQLYYKEIT 289
+ +GK +K EK+ + +K L+ HELS+EQQL+++EIT
Sbjct: 170 VPALFSLSFQDNKLIVEKKAGKEVKSK-EKVEDTSKASFLKPLSGHELSLEQQLFFREIT 228
Query: 290 EACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKA 349
EACV + E +R +AL+ L DPGL+++LPR FI+EGV+ N+ + A+LIYL+RM+ +
Sbjct: 229 EACVSNSEEKRKKALECLQYDPGLYQLLPRFSRFISEGVRANIHETEDAVLIYLLRMMDS 288
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKN--FNT 407
LL N++L LEKYLHEL+P+ LSC+V+KQ+ + +N ++ +A+ L+ ++ N +N+
Sbjct: 289 LLQNETLNLEKYLHELIPTALSCVVNKQIASE-DPNNRLVIQHYAASLIYKICSNKIYNS 347
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
NN+Q+R+T+ ++NA+ + + + YGAI
Sbjct: 348 PVNNVQSRITQTMANALQEESLPLHTYYGAI 378
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 30/139 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
S +S+K IAES G + DD ++ ++D + + +IQ
Sbjct: 9 ISKQSIKSIAESCGNAPIDDDCSQVIADEVNARLREVIQDGLKFMRHSKRDKLTRNDIDL 68
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNP-KSALETHLR 97
P+YG T F+PF++ASGGGR + F ++KE + DL+ + K L+ H R
Sbjct: 69 ALKFKSIEPVYGFTSRDFVPFRYASGGGRSIFFQEDKEFNLTDLIASQEASKVPLDNHTR 128
Query: 98 THWLAIEGVQPTVPENPPP 116
HWL+I+G QP +PENP P
Sbjct: 129 AHWLSIDGTQPLIPENPDP 147
>gi|291244770|ref|XP_002742270.1| PREDICTED: TBP-associated factor 6-like [Saccoglossus kowalevskii]
Length = 442
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 145/177 (81%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
V + +K L HELSVEQQL+YKEITEACVG+ E RR EALQSL++DPGL++M+PR TF
Sbjct: 28 VAQLKLKPLVMHELSVEQQLFYKEITEACVGACESRRSEALQSLSSDPGLYQMMPRFSTF 87
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IAEGVKVNVVQNNLALLIYLMRMVKAL+DN +++LEKYLHEL+P++ +CIVSKQLC RP+
Sbjct: 88 IAEGVKVNVVQNNLALLIYLMRMVKALMDNTTIFLEKYLHELIPAVSTCIVSKQLCLRPD 147
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
DNHWALRDFA+RL+ + K F+T+ NNIQ R+T++ A+ + K YG+IAG
Sbjct: 148 VDNHWALRDFAARLMASLCKKFSTTINNIQARMTKMFDKALQNDKAPLAIHYGSIAG 204
>gi|224129098|ref|XP_002320500.1| predicted protein [Populus trichocarpa]
gi|222861273|gb|EEE98815.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 194/327 (59%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR +L D+D ALN+ N+EPIYG L FK A G
Sbjct: 31 PDVEFRMRQIMQEAIKCMRHSKRTRLTTDDVDGALNLTNVEPIYGFASGGALQFKRAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L + D+K++DF+D++ PK+ L+T + HWLAIEGVQP +PEN P LE
Sbjct: 91 -RDLFYVDDKDIDFKDVIEAPLPKAPLDTAVVCHWLAIEGVQPAIPENAP--------LE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P P+ K+ + + V +K H LS E QLY+ +IT+ V
Sbjct: 142 VIAP--------------PSDGKISEQNDEFPVDIKLPVKHVLSRELQLYFDKITDLTVR 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ F EAL SLATD GLH ++P FIA+ V + N+ +LL LMR+V +LL N
Sbjct: 188 RSDSVLFKEALVSLATDSGLHPLIPYFTYFIADEVARGL--NDYSLLFALMRVVWSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++C+V+++L R ADNHW LRDF + L+ + K F N++Q
Sbjct: 246 PHIHIEPYLHQLMPSVVTCLVARKLGNR-FADNHWELRDFTANLVASICKRFGHVYNSLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
TR+T+ L NA+ DPK + YGAI G
Sbjct: 305 TRLTKTLLNALLDPKRSLTQHYGAIQG 331
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +D A L+ ++ + + I+Q
Sbjct: 7 ETIEVIAQSIGISNLSEDVALTLAPDVEFRMRQIMQEAIKCMRHSKRTRLTTDDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG L FK A G R+L + D+K++DF+D++ PK+ L+T + HWL
Sbjct: 67 LTNVEPIYGFASGGALQFKRAI-GHRDLFYVDDKDIDFKDVIEAPLPKAPLDTAVVCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|351696059|gb|EHA98977.1| Transcription initiation factor TFIID subunit 6 [Heterocephalus
glaber]
Length = 381
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 163/264 (61%), Gaps = 47/264 (17%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL DID AL ++N+EP+YG +F+PF+ AS
Sbjct: 81 ALKFMHMGKRQKLTTSDIDYALKLENVEPLYGFHAQEFIPFRFAS--------------- 125
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI--SKLGK- 244
HWL++EG QP +PENPPP K QK+E+ +P+ +K G+
Sbjct: 126 -------------------AHWLSMEGCQPAIPENPPPAPKEQQKVEATEPLKSAKPGQE 166
Query: 245 KDKDTSGKPTSA----------KLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
KD GK A K +L ++H+K + HELSVEQQLYYKEITEA VG
Sbjct: 167 KDGPLKGKGQGATPADSKRKEKKAPRLLEGASLHLKPHSIHELSVEQQLYYKEITEAYVG 226
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
S + R EALQS+ATDPGL++MLPR TFI+E V VNV QNNLALLIYLMRMVKAL+DN
Sbjct: 227 SCKAERVEALQSIATDPGLYQMLPRFSTFISERVCVNVAQNNLALLIYLMRMVKALMDNP 286
Query: 355 SLYLEKYLHELLPSILSCIVSKQL 378
+LYLEKY+HEL+P++++CIV K +
Sbjct: 287 TLYLEKYVHELIPAVMTCIVQKYI 310
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFK 60
+ + T +SMKV+AES+ I + ++ + L+D ++Y K I Q L F
Sbjct: 34 LKLSNTVLPSKSMKVVAESMVIAQIQEETCQLLTDEVSYRIKEIAQ--------DALKFM 85
Query: 61 HASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH-------LRTHWLAIEGVQPTVPEN 113
H G ++L +D +D+ L N+ P HWL++EG QP +PEN
Sbjct: 86 HM-GKRQKLTTSD---IDYALKLENVEPLYGFHAQEFIPFRFASAHWLSMEGCQPAIPEN 141
Query: 114 PPPVDKSAQKLES 126
PPP K QK+E+
Sbjct: 142 PPPAPKEQQKVEA 154
>gi|222423929|dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana]
Length = 549
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 191/327 (58%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EPIYG F+ A G
Sbjct: 31 PDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L +TD++EVDF+D++ PK+ L+T + HWLAIEGVQP +PEN P LE
Sbjct: 91 -RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAP--------LE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P K+ + ++ + V+ H LS E QLY+++I E +
Sbjct: 142 VIR--------------APAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQKIAELAMS 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ EAL SLA+D GLH ++P FIA+ V + N+ LL LM +V++LL N
Sbjct: 188 KSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGL--NDFRLLFNLMHIVRSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++C+VS++L R ADNHW LRDFA+ L++ + K + T +Q
Sbjct: 246 PHIHIEPYLHQLMPSVVTCLVSRKLGNR-FADNHWELRDFAANLVSLICKRYGTVYITLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
+R+TR L NA+ DPK YGAI G
Sbjct: 305 SRLTRTLVNALLDPKKALTQHYGAIQG 331
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +AA L+ ++ Y + I+Q
Sbjct: 7 ETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG F+ A G R+L +TD++EVDF+D++ PK+ L+T + HWL
Sbjct: 67 LRNVEPIYGFASGGPFRFRKAIGH-RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|15220358|ref|NP_171987.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|30679057|ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|79316742|ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|7211972|gb|AAF40443.1|AC004809_1 Strong similarity to the TATA binding protein-associated factor
from A. thaliana gb|Y13673. ESTs gb|N38153 and gb|W43450
come from this gene [Arabidopsis thaliana]
gi|15293057|gb|AAK93639.1| putative TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|20259031|gb|AAM14231.1| putative TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|39545920|gb|AAR28023.1| TAF6 [Arabidopsis thaliana]
gi|332189645|gb|AEE27766.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|332189646|gb|AEE27767.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|332189647|gb|AEE27768.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
Length = 549
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 191/327 (58%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EPIYG F+ A G
Sbjct: 31 PDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L +TD++EVDF+D++ PK+ L+T + HWLAIEGVQP +PEN P LE
Sbjct: 91 -RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAP--------LE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P K+ + ++ + V+ H LS E QLY+++I E +
Sbjct: 142 VIR--------------APAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQKIAELAMS 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ EAL SLA+D GLH ++P FIA+ V + N+ LL LM +V++LL N
Sbjct: 188 KSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGL--NDFRLLFNLMHIVRSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++C+VS++L R ADNHW LRDFA+ L++ + K + T +Q
Sbjct: 246 PHIHIEPYLHQLMPSVVTCLVSRKLGNR-FADNHWELRDFAANLVSLICKRYGTVYITLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
+R+TR L NA+ DPK YGAI G
Sbjct: 305 SRLTRTLVNALLDPKKALTQHYGAIQG 331
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +AA L+ ++ Y + I+Q
Sbjct: 7 ETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG F+ A G R+L +TD++EVDF+D++ PK+ L+T + HWL
Sbjct: 67 LRNVEPIYGFASGGPFRFRKAIGH-RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|222424297|dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana]
Length = 549
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 190/327 (58%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EPIYG F+ A G
Sbjct: 31 PDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L +TD++EVDF+D++ PK+ L+T + HWLAIEGVQP +PEN P LE
Sbjct: 91 -RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAP--------LE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P K+ + ++ + V+ H LS E QLY+++I E +
Sbjct: 142 VIR--------------APAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQKIAELAMS 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ EAL SLA+D GLH ++P FIA+ V + N+ LL LM +V +LL N
Sbjct: 188 KSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGL--NDFRLLFNLMHIVVSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++C+VS++L R ADNHW LRDFA+ L++ + K + T +Q
Sbjct: 246 PHIHIEPYLHQLMPSVVTCLVSRKLGNR-FADNHWELRDFAANLVSLICKRYGTVYITLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
+R+TR L NA+ DPK YGAI G
Sbjct: 305 SRLTRTLVNALLDPKKALTQHYGAIQG 331
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +AA L+ ++ Y + I+Q
Sbjct: 7 ETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG F+ A G R+L +TD++EVDF+D++ PK+ L+T + HWL
Sbjct: 67 LRNVEPIYGFASGGPFRFRKAIGH-RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|225460839|ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Vitis vinifera]
Length = 543
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 199/355 (56%), Gaps = 29/355 (8%)
Query: 88 PKSALETHLRTHWLAIEGVQPTV-PENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDID 146
PK +E ++ + I P V P V+ +++ + KCM HSKR L D+D
Sbjct: 5 PKETIEVIAQS--IGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVNDVD 62
Query: 147 DALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 206
AL ++N+EP+YG T FK A+G ++L + D+K+V+F+DL+ PK+ L+T +
Sbjct: 63 SALKLRNVEPLYGFTSGGPRQFKRAAGH-KDLFYVDDKDVEFKDLIEAPLPKTPLDTGVI 121
Query: 207 THWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVET 266
THWLAIEGVQP + EN P +E++ S K + G P KL
Sbjct: 122 THWLAIEGVQPAISENAP--------IEALAVPSDNKKSEYKEDGLPVDTKLP------- 166
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIA 325
H LS E QLY+ +I E + + F EAL SLATD G+H ++P FIA
Sbjct: 167 ------VKHVLSRELQLYFDKIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIA 220
Query: 326 EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD 385
+ V N+ N+ ++L LMR+ ++LL NQ +++E YLH+L+PSI++C+V+K+L R +D
Sbjct: 221 DEVTRNL--NDFSILFALMRVARSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSR-FSD 277
Query: 386 NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
NHW LR F + L+ V K + +N+Q RVTR L +A DP P YGAI G
Sbjct: 278 NHWELRSFTANLVASVCKRYGHVYHNLQPRVTRTLLHAFLDPTKALPQHYGAIQG 332
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 55/205 (26%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI N D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVNDVDSALK 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG T FK A+ G ++L + D+K+V+F+DL+ PK+ L+T + THWL
Sbjct: 67 LRNVEPLYGFTSGGPRQFKRAA-GHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGVITHWL 125
Query: 102 AIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT 161
AIEGVQP + EN P +E+++ +P D N K+ GL
Sbjct: 126 AIEGVQPAISENAP--------IEALA------------VPSD-----NKKSEYKEDGLP 160
Query: 162 VSQFLPFKHASGGGRELHFTDEKEV 186
V LP KH +L+F KE+
Sbjct: 161 VDTKLPVKHVLSRELQLYFDKIKEL 185
>gi|297737507|emb|CBI26708.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 199/355 (56%), Gaps = 29/355 (8%)
Query: 88 PKSALETHLRTHWLAIEGVQPTV-PENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDID 146
PK +E ++ + I P V P V+ +++ + KCM HSKR L D+D
Sbjct: 5 PKETIEVIAQS--IGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVNDVD 62
Query: 147 DALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 206
AL ++N+EP+YG T FK A+G ++L + D+K+V+F+DL+ PK+ L+T +
Sbjct: 63 SALKLRNVEPLYGFTSGGPRQFKRAAGH-KDLFYVDDKDVEFKDLIEAPLPKTPLDTGVI 121
Query: 207 THWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVET 266
THWLAIEGVQP + EN P +E++ S K + G P KL
Sbjct: 122 THWLAIEGVQPAISENAP--------IEALAVPSDNKKSEYKEDGLPVDTKLP------- 166
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIA 325
H LS E QLY+ +I E + + F EAL SLATD G+H ++P FIA
Sbjct: 167 ------VKHVLSRELQLYFDKIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIA 220
Query: 326 EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD 385
+ V N+ N+ ++L LMR+ ++LL NQ +++E YLH+L+PSI++C+V+K+L R +D
Sbjct: 221 DEVTRNL--NDFSILFALMRVARSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSR-FSD 277
Query: 386 NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
NHW LR F + L+ V K + +N+Q RVTR L +A DP P YGAI G
Sbjct: 278 NHWELRSFTANLVASVCKRYGHVYHNLQPRVTRTLLHAFLDPTKALPQHYGAIQG 332
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 55/205 (26%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI N D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVNDVDSALK 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG T FK A+ G ++L + D+K+V+F+DL+ PK+ L+T + THWL
Sbjct: 67 LRNVEPLYGFTSGGPRQFKRAA-GHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGVITHWL 125
Query: 102 AIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT 161
AIEGVQP + EN P +E+++ +P D N K+ GL
Sbjct: 126 AIEGVQPAISENAP--------IEALA------------VPSD-----NKKSEYKEDGLP 160
Query: 162 VSQFLPFKHASGGGRELHFTDEKEV 186
V LP KH +L+F KE+
Sbjct: 161 VDTKLPVKHVLSRELQLYFDKIKEL 185
>gi|115436920|ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group]
gi|20804496|dbj|BAB92191.1| putative TAF6 [Oryza sativa Japonica Group]
gi|113532699|dbj|BAF05082.1| Os01g0510800 [Oryza sativa Japonica Group]
gi|215768003|dbj|BAH00232.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618539|gb|EEE54671.1| hypothetical protein OsJ_01969 [Oryza sativa Japonica Group]
Length = 541
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 193/327 (59%), Gaps = 25/327 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H+KR L D+D AL+++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D++EVDF++++ PK+ L+T + HWLAIEGVQP +PEN PPVD E
Sbjct: 91 -KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWLAIEGVQPAIPEN-PPVDAIVAPTE 148
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ ++ GK D G P KL H LS E Q+Y+ +I E +
Sbjct: 149 --NKRTEHGKDD----GLPVDIKLP-------------VKHVLSRELQMYFDKIAELTMS 189
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
E F EAL SL+ D GLH ++P FIA+ V ++ +L +L LMR+V++LL N
Sbjct: 190 RSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSL--GDLPVLFALMRVVQSLLHN 247
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PSI++C+V+K+L G +DNHW LRDF++ L+ V + F + +NIQ
Sbjct: 248 PHIHIEPYLHQLMPSIITCMVAKRL-GHRLSDNHWELRDFSANLVGSVCRRFGHAYHNIQ 306
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
TRVTR L DP+ + YGAI G
Sbjct: 307 TRVTRTLVQGFLDPQKSLTQHYGAIQG 333
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 35/164 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VI +S+GI NLP D + L+ ++ Y + I+Q
Sbjct: 7 ETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALS 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G ++L + D++EVDF++++ PK+ L+T + HWL
Sbjct: 67 LRNVEPVYGFASGDPLRFKRAVGH-KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWL 125
Query: 102 AIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDI 145
AIEGVQP +PEN PPVD E+ K H K LPVDI
Sbjct: 126 AIEGVQPAIPEN-PPVDAIVAPTEN---KRTEHGKD-DGLPVDI 164
>gi|225446952|ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
vinifera]
gi|297739126|emb|CBI28777.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 188/327 (57%), Gaps = 26/327 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EPIYG T L FK A G
Sbjct: 31 PDVEYRMREVMQEAIKCMRHSKRTVLTTDDVDIALNLRNVEPIYGFTSGGPLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
+ L + D+K++DF+D++ PK+ L+ + HWLAIEGVQP +PEN P +E
Sbjct: 91 -KNLFYIDDKDLDFKDVIEAPLPKAPLDAAVVCHWLAIEGVQPAIPENAP--------VE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I S K ++ G P KL H LS E QLY+ +I + V
Sbjct: 142 VIAAPSDGKKFEQKDDGLPVDIKLP-------------IKHVLSRELQLYFDKIIDLTVN 188
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ F EAL SLATD GLH ++P FI++ V + N+ LL LMR+V +LL N
Sbjct: 189 RSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGL--NDFNLLFALMRVVWSLLQN 246
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++C+V+K++ R ADNHW LRDF + L+ + K F NN+Q
Sbjct: 247 PHIHIEPYLHQLMPSVVTCLVAKRIGNR-LADNHWELRDFTANLVASICKRFGHVYNNLQ 305
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
TR+T+ L +A DPK + YGAI G
Sbjct: 306 TRLTKTLLHAFLDPKRSMTQHYGAIQG 332
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 105/241 (43%), Gaps = 61/241 (25%)
Query: 9 SIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------------- 46
S E+++VIA+SIGI NL D A L+ ++ Y + ++Q
Sbjct: 5 SKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDDVDIA 64
Query: 47 -------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
PIYG T L FK A G + L + D+K++DF+D++ PK+ L+ + H
Sbjct: 65 LNLRNVEPIYGFTSGGPLRFKRAVGH-KNLFYIDDKDLDFKDVIEAPLPKAPLDAAVVCH 123
Query: 100 WLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYG 159
WLAIEGVQP +PEN PV+ A + F+ ++ LPVDI
Sbjct: 124 WLAIEGVQPAIPEN-APVEVIAAPSDGKKFE-----QKDDGLPVDIK------------- 164
Query: 160 LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTV 219
LP KH REL +K +D LT SAL G+ P V
Sbjct: 165 ------LPIKHVL--SRELQLYFDKIID----LTVNRSDSALFKEALVSLATDSGLHPLV 212
Query: 220 P 220
P
Sbjct: 213 P 213
>gi|297848746|ref|XP_002892254.1| TAFII59 [Arabidopsis lyrata subsp. lyrata]
gi|297338096|gb|EFH68513.1| TAFII59 [Arabidopsis lyrata subsp. lyrata]
Length = 554
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 189/332 (56%), Gaps = 30/332 (9%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EPIYG F+ A G
Sbjct: 31 PDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L +TD++EVDF+D++ PK+ L+T + HWLAIEGVQP +PEN P LE
Sbjct: 91 -RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAP--------LE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P K+ + ++ + V+ H LS E QLY+++I E +
Sbjct: 142 VIR--------------APAENKIHEQKDGPPIDVRLPVKHVLSRELQLYFQKIAELAMS 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGV-----KVNVVQNNLALLIYLMRMVK 348
F EAL SLA+D GLH ++P FIA+ V KV+ + LL LM +V+
Sbjct: 188 KSNPALFKEALVSLASDSGLHPLVPYFTNFIADEVTLCTTKVSNGLKDFRLLFNLMHIVR 247
Query: 349 ALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTS 408
+LL N + +E YL++L+PS+++C+VS++L R ADNHW LRDFAS L+ + K +
Sbjct: 248 SLLQNPHINIEPYLYQLMPSVVTCLVSRKLGNR-FADNHWELRDFASNLVALICKRYGPV 306
Query: 409 TNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+Q+R+TR L NA+ DPK YGAI G
Sbjct: 307 YITLQSRLTRTLVNALLDPKKALTQHYGAIRG 338
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +AA L+ ++ Y + I+Q
Sbjct: 7 ETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG F+ A G R+L +TD++EVDF+D++ PK+ L+T + HWL
Sbjct: 67 LRNVEPIYGFASGGPFRFRKAIGH-RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|218188315|gb|EEC70742.1| hypothetical protein OsI_02149 [Oryza sativa Indica Group]
Length = 501
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 187/314 (59%), Gaps = 25/314 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ KCM H+KR L D+D AL+++N+EP+YG L FK A G ++L + D++EVD
Sbjct: 4 AIKCMRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGH-KDLFYIDDREVD 62
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
F++++ PK+ L+T + HWLAIEGVQP +PEN PPVD E + ++ GK D
Sbjct: 63 FKEIIEAPLPKAPLDTAVVAHWLAIEGVQPAIPEN-PPVDAIVAPTE--NKRTEHGKDD- 118
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQS 306
G P KL H LS E Q+Y+ +I E + E F EAL S
Sbjct: 119 ---GLPVDIKLP-------------VKHVLSRELQMYFDKIAELTMSRSETSVFREALVS 162
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L+ D GLH ++P FIA+ V ++ +L +L LMR+V++LL N +++E YLH+L+
Sbjct: 163 LSRDSGLHPLVPYFSYFIADEVTRSL--GDLPVLFALMRVVQSLLHNPHIHIEPYLHQLM 220
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PSI++C+V+K+L G +DNHW LRDF++ L+ V + F + +NIQTRVTR L D
Sbjct: 221 PSIITCMVAKRL-GHRLSDNHWELRDFSANLVGSVCRRFGHAYHNIQTRVTRTLVQGFLD 279
Query: 427 PKINFPSLYGAIAG 440
P+ + YGAI G
Sbjct: 280 PQKSLTQHYGAIQG 293
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++P+YG L FK A G ++L + D++EVDF++++ PK+ L+T + HWLAIE
Sbjct: 30 VEPVYGFASGDPLRFKRAVGH-KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWLAIE 88
Query: 105 GVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDI 145
GVQP +PEN PPVD E+ K H K LPVDI
Sbjct: 89 GVQPAIPEN-PPVDAIVAPTEN---KRTEHGKD-DGLPVDI 124
>gi|358337993|dbj|GAA56324.1| transcription initiation factor TFIID subunit 6 [Clonorchis
sinensis]
Length = 684
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 186/329 (56%), Gaps = 33/329 (10%)
Query: 129 FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA-----SG-GGRELHFTD 182
+ M S+R D+D A + +E +G T + FLP + SG GG+
Sbjct: 122 LRVMEQSRRGVPQASDVDLASVLIGLEAPFGSTPANFLPIRTGGRTATSGPGGKVFFIRP 181
Query: 183 EKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP--------VDKSAQKLE 234
+KE+D + LL + + HWLA+ G QP P+NPPP S K E
Sbjct: 182 DKEIDVKALLLREPAGVLYDVSVVAHWLAVNGKQPVSPQNPPPDFLARMRQFSGSIGKRE 241
Query: 235 SIDPISKLGKKDKD-TSGK----PTSAKLEKL-------------RNVETVHVKQLATHE 276
S + + +D T GK P SA + R + ++ V++ HE
Sbjct: 242 SGQSVDRNDAASEDSTHGKRPNPPLSASKVRTTADGDVVSGVPHPRTISSISVERRP-HE 300
Query: 277 LSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
+S E +Y++E+TEACVG+ E RR EAL + DPGL +LP + TFI EGV+VNV +N
Sbjct: 301 VSQEVMIYFRELTEACVGACEKRRHEALDNATLDPGLQPILPYLVTFITEGVRVNVTNHN 360
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASR 396
LA+LIYLMR+VKAL+DN + LE YLH L+P++++C++++QLC +P DNHWALRDFA++
Sbjct: 361 LAILIYLMRLVKALVDNSHISLEPYLHLLVPTVITCVLNRQLCAKPITDNHWALRDFAAK 420
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
L + NTSTN + RVTR LS++++
Sbjct: 421 QLVTLCNRHNTSTNELYNRVTRELSSSLH 449
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 35/146 (23%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPI----------------- 48
+ S++ K+ AE GI NL AA L ++ ++++ I
Sbjct: 79 SGISVDVAKLCAEMCGISNLSTPAAMLLQKHLNQIARLLVHNILRVMEQSRRGVPQASDV 138
Query: 49 ------------YGLTVSQFLPFKHA-----SG-GGRELHFTDEKEVDFEDLLTNLNPKS 90
+G T + FLP + SG GG+ +KE+D + LL
Sbjct: 139 DLASVLIGLEAPFGSTPANFLPIRTGGRTATSGPGGKVFFIRPDKEIDVKALLLREPAGV 198
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPP 116
+ + HWLA+ G QP P+NPPP
Sbjct: 199 LYDVSVVAHWLAVNGKQPVSPQNPPP 224
>gi|255576099|ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223531590|gb|EEF33418.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 542
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 197/327 (60%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++NIEP+YG+ L FK A G
Sbjct: 31 PDVEYRMREIMQEAIKCMRHSKRTTLTCYDVDGALNLRNIEPVYGVASGGALQFKRAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L + D+K++DF+D++ PK+ L+T + HWLAIEGVQP +PEN P LE
Sbjct: 91 -RDLFYIDDKDIDFKDVIEAPLPKAPLDTSIVCHWLAIEGVQPAIPENAP--------LE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P P K +L++ V +K H LS E QLY+ +ITE +
Sbjct: 142 VIAP--------------PPDGKNNELKDGLPVDIKLPVRHVLSRELQLYFDKITELTMR 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ F EAL SLATDPGLH ++P FIA+ V ++ ++ LL LMR+V++LL N
Sbjct: 188 RSDLPLFKEALVSLATDPGLHPLVPYFTCFIADEVSRSL--SDFQLLFALMRVVRSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++C+V+K+L R ADNHW LRDF + L+ + K F +++Q
Sbjct: 246 PHIHIEPYLHQLMPSVVTCLVAKRLGNR-FADNHWELRDFTANLVASICKRFGHVYSSLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
TR+T+ L NA+ DPK + YGAI G
Sbjct: 305 TRLTKTLLNALFDPKRSLTQHYGAIQG 331
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +DAA L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGITNLSEDAALSLTPDVEYRMREIMQEAIKCMRHSKRTTLTCYDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG+ L FK A G R+L + D+K++DF+D++ PK+ L+T + HWL
Sbjct: 67 LRNIEPVYGVASGGALQFKRAI-GHRDLFYIDDKDIDFKDVIEAPLPKAPLDTSIVCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|449444699|ref|XP_004140111.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 543
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 189/327 (57%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQEAIKCMRHSKRTTLTANDVDGALNLRNVEPMYGFASGGPLRFKRAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L + ++K+++F+D++ PK+ +T + HWLAIEGVQP +PEN P +E
Sbjct: 91 -RDLFYLEDKDLEFKDIIDAPLPKAPFDTAVFCHWLAIEGVQPAIPENAP--------VE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P S K ++ G P KL H LS E QLY+ +ITE V
Sbjct: 142 VILPPSD-AKSNEQMGGLPVDIKLP-------------VKHILSKELQLYFDKITELVVS 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SLATD GLH ++P FIA+ V + + +LL LMR+V +LL N
Sbjct: 188 RSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGL--GDYSLLFALMRVVWSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+++PS+++C+V+K+L R +DNHW LRDF ++++ + K F N +Q
Sbjct: 246 PHIHIEPYLHQMMPSVVTCLVAKRLGNR-FSDNHWELRDFTAKVVALICKRFGHVYNTLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
T++T+ L NA DPK + YGAI G
Sbjct: 305 TKLTKTLLNAFLDPKRSLTQHYGAIQG 331
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+ IGI NL D A +++ ++ Y + I+Q
Sbjct: 7 ENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTANDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G R+L + ++K+++F+D++ PK+ +T + HWL
Sbjct: 67 LRNVEPMYGFASGGPLRFKRAIGH-RDLFYLEDKDLEFKDIIDAPLPKAPFDTAVFCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|256082306|ref|XP_002577399.1| transcription initiation factor tfiid [Schistosoma mansoni]
gi|350645501|emb|CCD59853.1| transcription initiation factor tfiid, putative [Schistosoma
mansoni]
Length = 536
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/314 (40%), Positives = 183/314 (58%), Gaps = 32/314 (10%)
Query: 158 YGLTVSQFLPFK-----HASG-GGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA 211
+G T + FLP + +SG GG+ +KE+D + LL + L HWL+
Sbjct: 136 FGTTTANFLPIRTGGRTASSGPGGKVFFIRPDKEIDVKALLLREPAGVIYDVSLVAHWLS 195
Query: 212 IEGVQPTVPENPPPVDKSAQKL----------ESIDPISKLGKKDKDTSGKPTSA----- 256
+ G QPT P+NPPP + L ++ PIS D ++S + S
Sbjct: 196 VNGKQPTSPQNPPPDFLAKMALLNNSFGSNNKQNKRPISHQKNDDINSSVEKHSKIGIHN 255
Query: 257 ----KLEKL-----RNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
KL+ L R V V V++ HE+S E +Y++E+TEACVG++E RR EAL +
Sbjct: 256 SNRDKLDLLSGSHPRKVLAVSVER-RPHEISQEVMIYFRELTEACVGANETRRHEALDNA 314
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
DPGL +LP + TFI EGV++NV +NLA+LIYLMR+VKAL+DN + LE YLH L+P
Sbjct: 315 TLDPGLQPILPHLMTFITEGVRINVTNHNLAILIYLMRLVKALIDNPHISLEPYLHLLVP 374
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
++++C++++QLC +P DNHWALRDFA++ L + NTS+N + RVTR LS A+
Sbjct: 375 TVITCVLNRQLCAKPITDNHWALRDFAAKQLVTLCNRHNTSSNELYGRVTRELSRALCSS 434
Query: 428 KIN-FPSLYGAIAG 440
I+ +LYG I
Sbjct: 435 AIHSMNTLYGIIVA 448
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 49 YGLTVSQFLPFK-----HASG-GGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA 102
+G T + FLP + +SG GG+ +KE+D + LL + L HWL+
Sbjct: 136 FGTTTANFLPIRTGGRTASSGPGGKVFFIRPDKEIDVKALLLREPAGVIYDVSLVAHWLS 195
Query: 103 IEGVQPTVPENPPP 116
+ G QPT P+NPPP
Sbjct: 196 VNGKQPTSPQNPPP 209
>gi|224056415|ref|XP_002298845.1| predicted protein [Populus trichocarpa]
gi|222846103|gb|EEE83650.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 192/331 (58%), Gaps = 32/331 (9%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQF---LPFKHA 171
P V+ +++ + KCM HS+R L D+D AL ++N+EPIYG L FK A
Sbjct: 33 PDVEYRLREIIQEAIKCMRHSRRTALTAHDVDTALILRNVEPIYGFGSGGDKVPLRFKRA 92
Query: 172 SGGG-RELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSA 230
+ G ++L++ D+K+V+F+ ++ PK L+T L +HWLAIEGVQP +PEN P
Sbjct: 93 AAAGHKDLYYIDDKDVNFKHVIEAPPPKPPLDTSLTSHWLAIEGVQPAIPENVP------ 146
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITE 290
I+ IS K D G KL VK + + EL QLY++++TE
Sbjct: 147 -----IEVISDGKKSDYKDDGLSIDVKLP---------VKDILSREL----QLYFEKVTE 188
Query: 291 ACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKA 349
E F +AL SLATD GLH ++P FIA+ V N+ NN +LL+ +MR+ ++
Sbjct: 189 LTARRSESAIFKQALVSLATDSGLHPLVPYFIQFIADEVSRNL--NNFSLLLAVMRIARS 246
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTST 409
LL N +++E YLH+L+PSI++C+V+K+L R +DNHW LR+F + L+ + K F +
Sbjct: 247 LLQNPYIHIEPYLHQLMPSIITCLVAKRLGNR-FSDNHWELRNFTANLVASICKRFGHAY 305
Query: 410 NNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+N+Q R+ R L +A DP + P YG+I G
Sbjct: 306 HNLQPRIIRTLVHAFLDPTKSLPQHYGSIQG 336
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 33/138 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+ IGI NL D + L+ ++ Y + IIQ
Sbjct: 9 EAIEVIAQGIGITNLSPDVSLTLAPDVEYRLREIIQEAIKCMRHSRRTALTAHDVDTALI 68
Query: 47 -----PIYGLTVSQF---LPFKHASGGG-RELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
PIYG L FK A+ G ++L++ D+K+V+F+ ++ PK L+T L
Sbjct: 69 LRNVEPIYGFGSGGDKVPLRFKRAAAAGHKDLYYIDDKDVNFKHVIEAPPPKPPLDTSLT 128
Query: 98 THWLAIEGVQPTVPENPP 115
+HWLAIEGVQP +PEN P
Sbjct: 129 SHWLAIEGVQPAIPENVP 146
>gi|357503231|ref|XP_003621904.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
gi|355496919|gb|AES78122.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
Length = 562
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 201/357 (56%), Gaps = 29/357 (8%)
Query: 88 PKSALETHLRTHWLAIEGVQPTVPEN-PPPVDKSAQKLESISFKCMSHSKRVKLLPVDID 146
PK +E ++ + I + P V + P V+ +++ + KCM HSKR L D+D
Sbjct: 5 PKETIEVIAQS--IGINNLSPDVALSVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADDVD 62
Query: 147 DALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 206
ALN+KN+EPIYG L FK A G R+L + D+K++D +D++ PK+ L+T L
Sbjct: 63 AALNLKNVEPIYGFASGGPLRFKRAVGH-RDLFYIDDKDLDLKDVIEAALPKAPLDTALT 121
Query: 207 THWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVET 266
HWLAIEGVQP +PEN P ++ I S + K ++ P KL
Sbjct: 122 CHWLAIEGVQPAIPENAP--------VDVISAPSDIKKHEQKDDNLPVDIKLP------- 166
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIA 325
H LS E QLY+ ++TE + + F EAL SLATD GLH ++P F+A
Sbjct: 167 ------VKHVLSRELQLYFDKVTELALNEPDSVLFKEALVSLATDSGLHPLVPYFTCFVA 220
Query: 326 EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD 385
+ V + +N LL LMR+V +LL N +++E YLH+L+PSI++C+V+K+L R D
Sbjct: 221 DEVSRGL--SNFPLLFALMRVVNSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSR-LTD 277
Query: 386 NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
NHW LRDF + L+ + K F +N+Q+R+++ L NA +DPK YGAI G G
Sbjct: 278 NHWELRDFTANLVASICKRFGHVYSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLG 334
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 61/239 (25%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL D A ++ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGINNLSPDVALSVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADDVDAALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG L FK A G R+L + D+K++D +D++ PK+ L+T L HWL
Sbjct: 67 LKNVEPIYGFASGGPLRFKRAV-GHRDLFYIDDKDLDLKDVIEAALPKAPLDTALTCHWL 125
Query: 102 AIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT 161
AIEGVQP +PEN PVD + S H ++ LPVDI
Sbjct: 126 AIEGVQPAIPEN-APVD-----VISAPSDIKKHEQKDDNLPVDIK--------------- 164
Query: 162 VSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVP 220
LP KH +L+F E+ + P S L G+ P VP
Sbjct: 165 ----LPVKHVLSRELQLYFDKVTELALNE------PDSVLFKEALVSLATDSGLHPLVP 213
>gi|449453563|ref|XP_004144526.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 544
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 190/327 (58%), Gaps = 27/327 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQEAIKCMRHSKRTTLTADDVDGALNLRNVEPMYGFASGGPLRFKRAMGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L + ++K+++F+D++ PK+ L+ + HWLAIEGVQP +PEN P +E
Sbjct: 91 -RDLFYLEDKDLEFKDVIDAPLPKAPLDAAVFCHWLAIEGVQPAIPENAP--------VE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P P+ K + ++ V +K H LS E QLY+ +ITE V
Sbjct: 142 VILP--------------PSDTKSSEQKDEVPVDIKLPVKHILSKELQLYFDKITELVVS 187
Query: 295 SDEGRRFE-ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F+ AL SLATD GLH ++P +IA+ V + + +LL LMR+V +LL N
Sbjct: 188 RSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARGL--GDYSLLFALMRVVWSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+++PS+++C+V+K+L R +DNHW LRDF ++++ + K F N +Q
Sbjct: 246 PHIHIEPYLHQMMPSVVTCLVAKRLGSR-FSDNHWELRDFTAKVVALICKRFGHVYNTLQ 304
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
T++T+ L NA DPK + YGAI G
Sbjct: 305 TKLTKTLLNAFLDPKRSLTQHYGAIRG 331
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+ +GI NL D A ++ ++ Y + I+Q
Sbjct: 7 ENIEVIAQCVGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G R+L + ++K+++F+D++ PK+ L+ + HWL
Sbjct: 67 LRNVEPMYGFASGGPLRFKRAMGH-RDLFYLEDKDLEFKDVIDAPLPKAPLDAAVFCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|356499648|ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Glycine max]
Length = 544
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 187/329 (56%), Gaps = 26/329 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN+KN+EPIYG L FK A G
Sbjct: 31 PDVEYRMRQIMQEAIKCMRHSKRTTLTADDVDAALNLKNVEPIYGFASGGPLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L + D+K+VD +D++ PK+ L+T + HWLAIEGVQP +PEN P +E
Sbjct: 91 -RDLFYIDDKDVDLKDVIEASLPKAPLDTAVTCHWLAIEGVQPAIPENAP--------VE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I S + K ++ P KL H LS E QLY+ ++ E +
Sbjct: 142 VISAPSDVKKHEQKDDNLPVDIKLP-------------VKHVLSRELQLYFDKVAELTLS 188
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ F EAL SLATD GLH ++P FIA+ V + NN LL LMR+V +LL N
Sbjct: 189 ESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGL--NNFPLLFALMRVVSSLLQN 246
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+ +E YLH+L+PS+++C+V+K+L R ADNHW LRDF + L+ + K F +N+Q
Sbjct: 247 PHIQIEPYLHQLMPSVVTCLVAKRLGTR-LADNHWELRDFTAHLVASICKRFGHVYSNLQ 305
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+R+T+ L NA DPK YGAI G G
Sbjct: 306 SRLTKTLLNAFLDPKKALTQHYGAIQGLG 334
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 101/230 (43%), Gaps = 67/230 (29%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL D A ++ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGINNLSHDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADDVDAALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG L FK A G R+L + D+K+VD +D++ PK+ L+T + HWL
Sbjct: 67 LKNVEPIYGFASGGPLRFKRAV-GHRDLFYIDDKDVDLKDVIEASLPKAPLDTAVTCHWL 125
Query: 102 AIEGVQPTVPENPPPVDKSAQKLESISF--KCMSHSKRVKLLPVDIDDALNMKNIEPIYG 159
AIEGVQP +PEN P +E IS H ++ LPVDI
Sbjct: 126 AIEGVQPAIPENAP--------VEVISAPSDVKKHEQKDDNLPVDIK------------- 164
Query: 160 LTVSQFLPFKHASGGGRELHF--------TDEKEVDFEDLLTNLNPKSAL 201
LP KH +L+F ++ V F++ L +L S L
Sbjct: 165 ------LPVKHVLSRELQLYFDKVAELTLSESDSVLFKEALVSLATDSGL 208
>gi|219887973|gb|ACL54361.1| unknown [Zea mays]
gi|413956299|gb|AFW88948.1| putative TATA binding protein family protein [Zea mays]
Length = 545
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 191/327 (58%), Gaps = 25/327 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ S KCM H+KR L D+D AL ++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQESIKCMRHAKRTVLTADDVDSALGLRNVEPVYGFASGDPLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D++EVDF++++ PK+ L+T + HWLAIEGVQP +PEN P +D E
Sbjct: 91 -KDLFYLDDREVDFKEIIDCPLPKAPLDTSVVAHWLAIEGVQPAIPEN-PAIDAIVPPTE 148
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ S+ GK D G P KL H LS E Q+Y+ +I E +
Sbjct: 149 --NKRSEHGKDD----GLPADVKLP-------------VKHVLSRELQMYFDKIAELTMS 189
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ F EAL SLA D GLH ++P FIA+ V ++ +L +L+ LMR+V++LL N
Sbjct: 190 RSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRSL--GDLPVLLALMRVVQSLLRN 247
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++CIV+K+L G +DNHW LRDF++ L+ V + F +N+Q
Sbjct: 248 PHIHIEPYLHQLMPSMITCIVAKRL-GHRLSDNHWELRDFSANLVALVCQRFGHVYHNLQ 306
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ L +A DP + YGA+ G
Sbjct: 307 NRLTKTLIHAFLDPAKSLTQHYGAVQG 333
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 30/133 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+S+GIP+L D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSVGIPSLGADVAVALAPDVEYRLREIMQESIKCMRHAKRTVLTADDVDSALG 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G ++L + D++EVDF++++ PK+ L+T + HWL
Sbjct: 67 LRNVEPVYGFASGDPLRFKRAVGH-KDLFYLDDREVDFKEIIDCPLPKAPLDTSVVAHWL 125
Query: 102 AIEGVQPTVPENP 114
AIEGVQP +PENP
Sbjct: 126 AIEGVQPAIPENP 138
>gi|413956298|gb|AFW88947.1| putative TATA binding protein family protein [Zea mays]
Length = 423
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 191/327 (58%), Gaps = 25/327 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ S KCM H+KR L D+D AL ++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQESIKCMRHAKRTVLTADDVDSALGLRNVEPVYGFASGDPLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D++EVDF++++ PK+ L+T + HWLAIEGVQP +PEN P +D E
Sbjct: 91 -KDLFYLDDREVDFKEIIDCPLPKAPLDTSVVAHWLAIEGVQPAIPEN-PAIDAIVPPTE 148
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ S+ GK D G P KL H LS E Q+Y+ +I E +
Sbjct: 149 --NKRSEHGKDD----GLPADVKLP-------------VKHVLSRELQMYFDKIAELTMS 189
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
+ F EAL SLA D GLH ++P FIA+ V ++ +L +L+ LMR+V++LL N
Sbjct: 190 RSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRSL--GDLPVLLALMRVVQSLLRN 247
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++CIV+K+L G +DNHW LRDF++ L+ V + F +N+Q
Sbjct: 248 PHIHIEPYLHQLMPSMITCIVAKRL-GHRLSDNHWELRDFSANLVALVCQRFGHVYHNLQ 306
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ L +A DP + YGA+ G
Sbjct: 307 NRLTKTLIHAFLDPAKSLTQHYGAVQG 333
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 30/133 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+S+GIP+L D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSVGIPSLGADVAVALAPDVEYRLREIMQESIKCMRHAKRTVLTADDVDSALG 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G ++L + D++EVDF++++ PK+ L+T + HWL
Sbjct: 67 LRNVEPVYGFASGDPLRFKRAVGH-KDLFYLDDREVDFKEIIDCPLPKAPLDTSVVAHWL 125
Query: 102 AIEGVQPTVPENP 114
AIEGVQP +PENP
Sbjct: 126 AIEGVQPAIPENP 138
>gi|326488229|dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 191/327 (58%), Gaps = 25/327 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H+KR L D+D AL+++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALSLRNVEPVYGFASGDHLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D++EVDF++++ PK+ L+T + HWLAIEGVQP +PEN PP+D + E
Sbjct: 91 -KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWLAIEGVQPAIPEN-PPIDAISAPTE 148
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+K ++ KD G P KL H LS E Q+Y+ +I E +
Sbjct: 149 -----NKRTEQVKD-DGLPVDIKLP-------------VKHILSRELQMYFDKIAELTMS 189
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F EAL SL+ D GLH ++P FIA+ V ++ +L +L LMR+V++LL N
Sbjct: 190 RSSTPIFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLA--DLPVLFALMRVVQSLLRN 247
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PS+++CIV+K+L G +DNHW LRDF++ L+ V + + +N+Q
Sbjct: 248 PHIHIEPYLHQLMPSMITCIVAKRL-GHRLSDNHWELRDFSANLVASVCRRYGHVYHNLQ 306
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ L +A DP YGA+ G
Sbjct: 307 IRLTKTLVHAFLDPHKALTQHYGAVQG 333
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGIP+LP D + L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGIPSLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALS 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G ++L + D++EVDF++++ PK+ L+T + HWL
Sbjct: 67 LRNVEPVYGFASGDHLRFKRAVGH-KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PENPP
Sbjct: 126 AIEGVQPAIPENPP 139
>gi|302772845|ref|XP_002969840.1| hypothetical protein SELMODRAFT_146848 [Selaginella moellendorffii]
gi|300162351|gb|EFJ28964.1| hypothetical protein SELMODRAFT_146848 [Selaginella moellendorffii]
Length = 484
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 190/329 (57%), Gaps = 27/329 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D++ AL+++N+EP+YG L F+ A G
Sbjct: 31 PDVEYRMREIMQEAIKCMRHSKRSVLTTDDVNTALSLRNVEPLYGFASGDPLRFRRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
+L F D++E+D +++ K+ L+T + HWLAIEG+QP +PEN P
Sbjct: 91 S-DLFFIDDRELDCKEITEAPLTKAPLDTAVMAHWLAIEGIQPAIPENVP---------- 139
Query: 235 SIDPISKLGK-KDKDTSG-KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEAC 292
IDP+S + K D G KP TV +K H LS E QLY+++ITE
Sbjct: 140 -IDPLSAPPEVKKSDIPGLKPDQM---------TVDLKLPVKHVLSRELQLYFEKITELI 189
Query: 293 V-GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
V G+D+ + SLATD GLH ++P FIA+ V + N+L LL LMR+ ++LL
Sbjct: 190 VTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVTRGL--NDLPLLFSLMRVARSLL 247
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
N +++E YLH+L+PS+++C+V+K+L G+ NHW LRDF + L+ + K F + N
Sbjct: 248 LNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFV-NHWELRDFTATLIAFICKRFGHAYYN 306
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+QTRVT+ L +A DPK YGA+ G
Sbjct: 307 LQTRVTKTLLHAFLDPKRAMTQHYGAVKG 335
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 38/147 (25%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E++ VIA+SIGI NL DD A L+ ++ Y + I+Q
Sbjct: 7 ETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDDVNTALS 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L F+ A G +L F D++E+D +++ K+ L+T + HWL
Sbjct: 67 LRNVEPLYGFASGDPLRFRRAVGHS-DLFFIDDRELDCKEITEAPLTKAPLDTAVMAHWL 125
Query: 102 AIEGVQPTVPEN--------PPPVDKS 120
AIEG+QP +PEN PP V KS
Sbjct: 126 AIEGIQPAIPENVPIDPLSAPPEVKKS 152
>gi|302806890|ref|XP_002985176.1| hypothetical protein SELMODRAFT_234732 [Selaginella moellendorffii]
gi|300147004|gb|EFJ13670.1| hypothetical protein SELMODRAFT_234732 [Selaginella moellendorffii]
Length = 484
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 190/329 (57%), Gaps = 27/329 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D++ AL+++N+EP+YG L F+ A G
Sbjct: 31 PDVEYRMREIMQEAIKCMRHSKRSVLTTDDVNTALSLRNVEPLYGFASGDPLRFRRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
+L F D++E+D +++ K+ L+T + HWLAIEG+QP +PEN P
Sbjct: 91 S-DLFFIDDRELDCKEITEAPLTKAPLDTAVMAHWLAIEGIQPAIPENVP---------- 139
Query: 235 SIDPISKLGK-KDKDTSG-KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEAC 292
IDP+S + K D G KP TV +K H LS E QLY+++ITE
Sbjct: 140 -IDPLSAPPEVKKSDIPGLKPDQM---------TVDLKLPVKHVLSRELQLYFEKITELI 189
Query: 293 V-GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
V G+D+ + SLATD GLH ++P FIA+ V + N+L LL LMR+ ++LL
Sbjct: 190 VTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVTRGL--NDLPLLFSLMRVARSLL 247
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
N +++E YLH+L+PS+++C+V+K+L G+ NHW LRDF + L+ + K F + N
Sbjct: 248 LNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFV-NHWELRDFTATLIAFICKRFGHAYYN 306
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+QTRVT+ L +A DPK YGA+ G
Sbjct: 307 LQTRVTKTLLHAFLDPKRAMTQHYGAVKG 335
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 38/147 (25%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E++ VIA+SIGI NL DD A L+ ++ Y + I+Q
Sbjct: 7 ETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDDVNTALS 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L F+ A G +L F D++E+D +++ K+ L+T + HWL
Sbjct: 67 LRNVEPLYGFASGDPLRFRRAVGHS-DLFFIDDRELDCKEITEAPLTKAPLDTAVMAHWL 125
Query: 102 AIEGVQPTVPEN--------PPPVDKS 120
AIEG+QP +PEN PP V KS
Sbjct: 126 AIEGIQPAIPENVPIDPLSAPPEVKKS 152
>gi|348546063|ref|XP_003460498.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Oreochromis niloticus]
Length = 246
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 119/139 (85%)
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY
Sbjct: 1 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 60
Query: 362 LHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLS 421
LHEL+P++++CIVSKQLC RP+ DNHWALRDFA+RL+ Q K F+T+TNNIQ+R+T+ +
Sbjct: 61 LHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFT 120
Query: 422 NAINDPKINFPSLYGAIAG 440
+ D K + + YG IAG
Sbjct: 121 KSWLDDKTQWTTRYGCIAG 139
>gi|2196466|emb|CAA74021.1| TATA binding protein-associated factor [Arabidopsis thaliana]
Length = 527
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 189/328 (57%), Gaps = 27/328 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMK-NIEPIYGLTVSQFLPFKHASG 173
P V+ +++ + KCM HSKR L D+D A +K N+EPIYG + + + +
Sbjct: 31 PDVEYRVREIMQEAIKCMLHSKRTTLTASDVDGASQLKGNVEPIYGFGLRRAIFGFRKAI 90
Query: 174 GGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 233
G R+L +TD++EVDF+D++ PK+ L+T + HWLAIEGVQP +PEN P L
Sbjct: 91 GHRDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAP--------L 142
Query: 234 ESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITE-AC 292
E I + ++ T +P + V+ H LS E QLY+++I E A
Sbjct: 143 EVIRAPGR--NQNPVTKRRP------------LIDVRLPVKHVLSRELQLYFQKIAELAM 188
Query: 293 VGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLD 352
S+ EAL SLA+D GLH ++P FIA+ V + N+ LL LM +V++LL
Sbjct: 189 SKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGL--NDFRLLFNLMHIVRSLLQ 246
Query: 353 NQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNI 412
N ++ E YLH+L+PS+++C+VS++L R ADNHW LRD A+ L++ + K + T +
Sbjct: 247 NPHIHREPYLHQLMPSVVTCLVSRKLGNR-FADNHWELRDLAANLVSLICKRYGTVYITL 305
Query: 413 QTRVTRLLSNAINDPKINFPSLYGAIAG 440
Q+R+TR L NA+ DPK YGAI G
Sbjct: 306 QSRLTRTLVNALLDPKKALTQHYGAIQG 333
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 30/135 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL +AA L+ ++ Y + I+Q
Sbjct: 7 ETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMLHSKRTTLTASDVDGASQ 66
Query: 47 ------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
PIYG + + + + G R+L +TD++EVDF+D++ PK+ L+T + HW
Sbjct: 67 LKGNVEPIYGFGLRRAIFGFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHW 126
Query: 101 LAIEGVQPTVPENPP 115
LAIEGVQP +PEN P
Sbjct: 127 LAIEGVQPAIPENAP 141
>gi|440797528|gb|ELR18614.1| Hypothetical protein ACA1_155710 [Acanthamoeba castellanii str.
Neff]
Length = 462
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 182/309 (58%), Gaps = 25/309 (8%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M HSKR K+ D+++AL ++N+E +YG + ++ L F A G ++L F D++E+DF ++
Sbjct: 1 MRHSKREKMSTEDVNNALRLRNVETLYGFSGNEPLKFVKAVGT-KDLFFIDDREIDFTEI 59
Query: 192 LTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSG 251
+ + P+ E+ L HWLA+EGVQP +P+NP ++E+ D K + S
Sbjct: 60 IASPLPEVPRESSLSAHWLAVEGVQPAIPQNP------TLQIETGDAALKRKRAAAAESD 113
Query: 252 KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDP 311
+ V+ + H LS E QLYY++IT+A G+ E AL SLATDP
Sbjct: 114 ---------------LQVRPIVKHTLSKELQLYYEKITKAVKGTSEKVATAALNSLATDP 158
Query: 312 GLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILS 371
G+ ++LP FI++ V N+ +NLA L LMRMV+ALL + +L++E YLH+L+P IL+
Sbjct: 159 GIQQLLPYFTQFISDEVTHNL--HNLAYLKNLMRMVRALLQSNNLHIEPYLHQLMPPILT 216
Query: 372 CIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINF 431
C+V ++LC P D HW LRD+A+ L+ + F + N+Q R+T+ L NA D
Sbjct: 217 CLVGRRLCENPNED-HWELRDYAASLVALICLRFGKAYTNLQPRITKTLINAFLDLSRPL 275
Query: 432 PSLYGAIAG 440
+ YGAI G
Sbjct: 276 TTHYGAIVG 284
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++ +YG + ++ L F A G ++L F D++E+DF +++ + P+ E+ L HWLA+E
Sbjct: 23 VETLYGFSGNEPLKFVKAVGT-KDLFFIDDREIDFTEIIASPLPEVPRESSLSAHWLAVE 81
Query: 105 GVQPTVPENP 114
GVQP +P+NP
Sbjct: 82 GVQPAIPQNP 91
>gi|357157836|ref|XP_003577929.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Brachypodium distachyon]
Length = 545
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 188/327 (57%), Gaps = 25/327 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H+KR L D+D AL+++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D++EVDF++++ PK+ L+T + HWLAIEGVQP +PEN PP+D E
Sbjct: 91 -KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWLAIEGVQPAIPEN-PPIDVILAPTE 148
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
SK + KD G P KL H LS E Q+Y+ +I E +
Sbjct: 149 -----SKRTEHVKD-DGLPVDIKLP-------------VKHILSRELQMYFDKIAELTMS 189
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F EAL SL+ D GLH ++P FIA+ V ++ +L +L LMR+V++LL N
Sbjct: 190 RSNTSVFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLA--DLPVLFALMRVVQSLLRN 247
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+P +++CIV+K+L G +DNHW LRDF++ L+ V + + +N+Q
Sbjct: 248 PHVHIEPYLHQLMPPMITCIVAKRL-GHRLSDNHWELRDFSANLVASVCRRYGHVYHNLQ 306
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+T+ L +A DP YGA+ G
Sbjct: 307 IRLTKTLIHAFLDPHKALTQHYGAVQG 333
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+S+GI LP D + L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSVGIATLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALS 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G ++L + D++EVDF++++ PK+ L+T + HWL
Sbjct: 67 LRNVEPVYGFASGDPLRFKRAVGH-KDLFYIDDREVDFKEIIEAPLPKAPLDTAVVAHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PENPP
Sbjct: 126 AIEGVQPAIPENPP 139
>gi|290999389|ref|XP_002682262.1| predicted protein [Naegleria gruberi]
gi|284095889|gb|EFC49518.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 183/316 (57%), Gaps = 23/316 (7%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLP--FKHASGGGRELHFTDEKEVD 187
KCM H+KR L DI +AL MKNIEP+YG P F+ ++L+F ++ E+D
Sbjct: 46 KCMKHAKRGVLTTDDISNALAMKNIEPLYGFKGQSSQPNRFRRVKQT-KDLYFLEDVELD 104
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
+D L PK + + THWLAI+G+QP +P+NP +E + K KDK
Sbjct: 105 LKDCLEKPLPKIPIGPSIFTHWLAIQGIQPKIPQNP--------TIEETESERKKESKDK 156
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR---RFEAL 304
D S K +S+ + V K L H LS E Q+Y++++TEA + + R +
Sbjct: 157 DQSKKVSSS------HDPNVEFKPLVKHILSEELQMYFEKVTEAIKDTTNQKKELRKAVI 210
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
+SLATD G+++++P FIA V N+ NL LL LM M KALL N ++++E YLH+
Sbjct: 211 ESLATDSGINQLVPYFTQFIASEVTNNM--RNLTLLYRLMEMTKALLVNPNIHIELYLHQ 268
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI 424
++PSIL+CIV K LC P +NHW LRDF++ + + + F +S + +Q R+T+ L +A
Sbjct: 269 IMPSILTCIVGKTLCENP-YENHWGLRDFSANTIAYICRKFGSSYHTLQPRITKTLLHAF 327
Query: 425 NDPKINFPSLYGAIAG 440
DPK + + YGAI G
Sbjct: 328 LDPKRSRATHYGAIVG 343
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 32/138 (23%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
F E+++VIA+S+GI L D+ A+ L+ ++ Y + IIQ
Sbjct: 4 FQKETIQVIAQSVGITKLKDEIAQALALDVEYRVREIIQDASKCMKHAKRGVLTTDDISN 63
Query: 47 --------PIYGLTVSQFLP--FKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
P+YG P F+ ++L+F ++ E+D +D L PK + +
Sbjct: 64 ALAMKNIEPLYGFKGQSSQPNRFRRVKQT-KDLYFLEDVELDLKDCLEKPLPKIPIGPSI 122
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLAI+G+QP +P+NP
Sbjct: 123 FTHWLAIQGIQPKIPQNP 140
>gi|168019548|ref|XP_001762306.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686384|gb|EDQ72773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 194/339 (57%), Gaps = 29/339 (8%)
Query: 112 ENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA 171
E P V+ +++ + KCM HSKR L D++ AL+++N+EP+YG L F+ A
Sbjct: 28 ELAPDVEYRMREIMQEAVKCMRHSKRSILTTDDVNSALSLRNVEPLYGFASGDPLRFRRA 87
Query: 172 SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQ 231
G +L + ++++++F++++ PK+ L+ + HWLA+EGVQP +PEN P
Sbjct: 88 LGHS-DLFYVEDRDLEFKEVVEAPLPKAPLDASVVAHWLAVEGVQPAIPENAP------- 139
Query: 232 KLESIDPISKLGKKDKDTSGKPTSAKLEKLR--NVETVHVKQLATHELSVEQQLYYKEIT 289
+E + P PT K E R + + VK H LS E QLY++++T
Sbjct: 140 -IEVLAP--------------PTETKKEGPRKDDESAIDVKPPVKHVLSKELQLYFEKMT 184
Query: 290 EACV-GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVK 348
E V G+D +AL SLATD GLH ++P F+A+ V ++ ++ LL LMR+V+
Sbjct: 185 ELVVTGADTQLLRDALVSLATDSGLHPLVPYFTQFVADEVTRSL--DDFPLLFSLMRLVQ 242
Query: 349 ALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTS 408
+LL N +++E YLH+++PS+++C+V+K+L G+ NHW LRDF + L+ + K F
Sbjct: 243 SLLLNPHIHIEPYLHQMMPSVITCLVAKRLGGKGIV-NHWELRDFTASLVAFICKRFGHV 301
Query: 409 TNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTER 447
+N+Q RVTR L +A DPK YGAI G + R
Sbjct: 302 YHNLQGRVTRTLLHAFLDPKKALTQHYGAIRGLAALGSR 340
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++ VIA+SIGI NL DD AKEL+ ++ Y + I+Q
Sbjct: 7 DTIHVIAQSIGIANLHDDVAKELAPDVEYRMREIMQEAVKCMRHSKRSILTTDDVNSALS 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L F+ A G +L + ++++++F++++ PK+ L+ + HWL
Sbjct: 67 LRNVEPLYGFASGDPLRFRRALGHS-DLFYVEDRDLEFKEVVEAPLPKAPLDASVVAHWL 125
Query: 102 AIEGVQPTVPENPP 115
A+EGVQP +PEN P
Sbjct: 126 AVEGVQPAIPENAP 139
>gi|449463755|ref|XP_004149597.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
gi|449503215|ref|XP_004161891.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 535
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 187/329 (56%), Gaps = 33/329 (10%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D+AL ++N+EPIYG L FK A+ G
Sbjct: 31 PDVEYRVREIMQEAVKCMRHSKRTVLSSSDVDNALKLRNLEPIYGFAACDSLRFKRAA-G 89
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D+K+V+ +++ + K+ ++T + THWLA+EGVQP VPE
Sbjct: 90 HKDLFYIDDKDVELNNVIESPLAKATVDTSVATHWLAVEGVQPAVPE------------- 136
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV- 293
S L ++ D GK + K E+L K H +S + QLY+++IT +
Sbjct: 137 -----SLLTEEPHD--GKKSDLKEEEL----PYDSKAPTKHVISRDLQLYFEKITGLILN 185
Query: 294 --GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
GS R EAL+ LA D G+ +LP FIA+ V N+ N LLI LMRMV LL
Sbjct: 186 KSGSILIR--EALRCLAVDSGIQPLLPYFTCFIADEVSKNLC--NCQLLIALMRMVWCLL 241
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
N +++ YLH+L+PSI++C+V+KQL G+ +DNHW LRD A+ L++ + K F +N
Sbjct: 242 RNPQIHMAPYLHQLMPSIITCLVAKQL-GKRLSDNHWELRDLAASLVSLICKRFGHVYHN 300
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
IQ RVT+ L + DP P YGA+ G
Sbjct: 301 IQPRVTKTLLHVFLDPSKLLPQHYGAVRG 329
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 30/132 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
ES++++A+SIGI NL + A L+ ++ Y + I+Q
Sbjct: 7 ESIEIVAQSIGISNLSPEVALALTPDVEYRVREIMQEAVKCMRHSKRTVLSSSDVDNALK 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG L FK A+G ++L + D+K+V+ +++ + K+ ++T + THWL
Sbjct: 67 LRNLEPIYGFAACDSLRFKRAAGH-KDLFYIDDKDVELNNVIESPLAKATVDTSVATHWL 125
Query: 102 AIEGVQPTVPEN 113
A+EGVQP VPE+
Sbjct: 126 AVEGVQPAVPES 137
>gi|356527101|ref|XP_003532152.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 1 [Glycine max]
Length = 539
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 195/329 (59%), Gaps = 33/329 (10%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P ++ +++ S KCM HS R L D+D AL ++N+EPIYG T + FK A+G
Sbjct: 31 PDLEYRIREIMQESVKCMRHSMRTFLTTEDVDTALALRNLEPIYGSTSNDPPQFKRAAGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D+K+VD +D++ PK+ L+T + +HWLAIEGVQP +PEN P
Sbjct: 91 -KDLFYIDDKDVDIKDIIEAPLPKAPLDTSITSHWLAIEGVQPAIPENAP---------- 139
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV- 293
++ S++ K + G P KL VK L T EL QLYY++IT+ +
Sbjct: 140 -VEAPSEIRKSEYKEDGLPVDVKLP---------VKHLITREL----QLYYEKITDLTLN 185
Query: 294 --GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
GS RR AL SLATD GLH ++P F+A+ V N+ NNLA+L LMR+V++LL
Sbjct: 186 KPGSIPFRR--ALVSLATDSGLHPLVPYFTFFVADEVAQNL--NNLAVLFALMRLVRSLL 241
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
N +++E YLH+L+P I++CIV+K++ R +D+HW LR+F++ L+ + + F +N
Sbjct: 242 QNSQIHIELYLHQLMPPIITCIVAKRIGNR-LSDDHWELRNFSANLVASICQRFGHIYHN 300
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+Q RVT+ ++ DP P YGAI G
Sbjct: 301 LQPRVTKTFLHSFLDPTKALPQHYGAIKG 329
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESVKCMRHSMRTFLTTEDVDTALA 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG T + FK A+G ++L + D+K+VD +D++ PK+ L+T + +HWL
Sbjct: 67 LRNLEPIYGSTSNDPPQFKRAAGH-KDLFYIDDKDVDIKDIIEAPLPKAPLDTSITSHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|19075428|ref|NP_587928.1| histone H4-like TAF Taf6, SAGA complex subunit [Schizosaccharomyces
pombe 972h-]
gi|74626857|sp|O74462.1|TAF6_SCHPO RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TBP-associated factor 50 kDa;
Short=TAFII-50; Short=TAFII50; AltName:
Full=TBP-associated factor 6
gi|3560272|emb|CAA20756.1| histone H4-like TAF Taf6, SAGA complex subunit [Schizosaccharomyces
pombe]
Length = 452
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 175/320 (54%), Gaps = 22/320 (6%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS--GGGRELHFTDEKEVD 187
K M HSKR L DI AL N+EP+YG S+ L F A+ G L++ D++EVD
Sbjct: 48 KFMVHSKRTVLTSADISSALRTLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVD 107
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
FE ++ PK HWLAIEGVQP +P+NP P D + + S K
Sbjct: 108 FEKIINAPLPKVPRNISYSAHWLAIEGVQPAIPQNPTPSDHTVGEWAS-----------K 156
Query: 248 DTSG----KPTSAKLEK--LRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEGRR 300
TSG T+AK + + +++ V +K L H LS E QLY++ IT A + ++ R
Sbjct: 157 GTSGVMPGASTAAKEARNGVTSMDNVEIKPLVRHVLSKELQLYFERITSALLDETNVELR 216
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
AL SL DPGLH++LP F+++ V N+ NL +L LM M ALLDN +L++E
Sbjct: 217 DAALSSLRDDPGLHQLLPYFIMFLSDSVTRNL--GNLVVLTTLMHMAWALLDNPNLFVEP 274
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
Y+ +L+PSIL+C+V+K+L P H+ALRD A+ LL V F ++ RVTR
Sbjct: 275 YVQQLMPSILTCLVAKRLGSDPNNHEHYALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTA 334
Query: 421 SNAINDPKINFPSLYGAIAG 440
A D + + YGAI G
Sbjct: 335 LKAFLDNTKPYSTHYGAIKG 354
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 31/152 (20%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------- 46
T ++IES+K +AE +GI NL D+ A ++ ++ Y ++Q
Sbjct: 4 TVWNIESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADI 63
Query: 47 ----------PIYGLTVSQFLPFKHAS--GGGRELHFTDEKEVDFEDLLTNLNPKSALET 94
P+YG S+ L F A+ G L++ D++EVDFE ++ PK
Sbjct: 64 SSALRTLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNI 123
Query: 95 HLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
HWLAIEGVQP +P+NP P D + + S
Sbjct: 124 SYSAHWLAIEGVQPAIPQNPTPSDHTVGEWAS 155
>gi|356567052|ref|XP_003551737.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Glycine max]
Length = 543
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 196/332 (59%), Gaps = 33/332 (9%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P ++ +++ S KCM HSKR L D+D AL ++N+EPIYG T + FK A+G
Sbjct: 31 PDLEYRIREIMQESVKCMRHSKRTFLTTEDVDTALALRNLEPIYGFTSNDPPRFKRAAGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D+K+VD +D++ PK+ L+T + +HWLAIEGVQP +PEN P +E
Sbjct: 91 -KDLFYIDDKDVDIKDIVEAPLPKAPLDTSITSHWLAIEGVQPAIPENAP--------VE 141
Query: 235 SIDP---ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEA 291
I P S++ K + G P KL VK L T EL QLYY++IT+
Sbjct: 142 GIFPDLTPSEIRKSEFKEDGLPVDVKLP---------VKHLITREL----QLYYEKITDL 188
Query: 292 CV---GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVK 348
+ GS RR AL SL+ D GLH ++P F+A+ V N+ NNLA+L LMR+V+
Sbjct: 189 TLKKPGSIPFRR--ALVSLSADSGLHPLVPYFTFFVADEVARNL--NNLAVLFALMRLVR 244
Query: 349 ALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTS 408
+LL N +++E YLH+L+P I++CIV+K++ R +D HW LR+F++ L+T + + F
Sbjct: 245 SLLQNSQIHIELYLHQLMPPIITCIVAKRIGNR-LSDEHWELRNFSANLVTSICQRFGHI 303
Query: 409 TNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+N+Q RV + ++ DP P YGAI G
Sbjct: 304 YHNLQPRVMKTFLHSFLDPTKALPQHYGAIKG 335
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGITNLSSDVALSLAPDLEYRIREIMQESVKCMRHSKRTFLTTEDVDTALA 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG T + FK A+G ++L + D+K+VD +D++ PK+ L+T + +HWL
Sbjct: 67 LRNLEPIYGFTSNDPPRFKRAAGH-KDLFYIDDKDVDIKDIVEAPLPKAPLDTSITSHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|428178631|gb|EKX47505.1| transcription initiation factor TFIID, subunit TAF6 [Guillardia
theta CCMP2712]
Length = 390
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 183/318 (57%), Gaps = 30/318 (9%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPF--KHASGGGRELHFTD 182
++++FK HS+R KL P DI++AL ++N+EP+YG T + + + K GGG ++ +
Sbjct: 43 DALNFK--RHSRRRKLTPADINNALRVRNVEPLYGFTFPEPIVYTTKQGEGGGSQI-IIE 99
Query: 183 EKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL 242
EKE++F++LL+ PK+ +E LR HWLAI+GVQP +PENP P E++D ++
Sbjct: 100 EKELEFDELLSAPLPKAPVEVTLRAHWLAIDGVQPLIPENPIP--------ENLD-VAAA 150
Query: 243 GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE 302
GKK K+++ ET + LS E QLYY+ +T A +
Sbjct: 151 GKK-------------RKVKDSETSEKDPMVQDVLSQELQLYYENVTSAVIQGSPHILSA 197
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
AL SL DPGL +LP FI + VK ++ +L +L L+ M A+L N L++E L
Sbjct: 198 ALSSLRKDPGLQALLPYFAQFITDEVKRSL--KDLPILNALLSMTLAILSNAQLHVEPRL 255
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
HEL+P++++C+V KQLC + D HW LRD A++LL + + + +Q R+T L +
Sbjct: 256 HELMPAVMTCMVGKQLC-KSSLDPHWNLRDRAAKLLNFIVDRYAAPYSTLQQRITNTLLH 314
Query: 423 AINDPKINFPSLYGAIAG 440
A +P + YGAIAG
Sbjct: 315 AFLEPTKPLTTHYGAIAG 332
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 45 IQPIYGLTVSQFLPF--KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA 102
++P+YG T + + + K GGG ++ +EKE++F++LL+ PK+ +E LR HWLA
Sbjct: 70 VEPLYGFTFPEPIVYTTKQGEGGGSQI-IIEEKELEFDELLSAPLPKAPVEVTLRAHWLA 128
Query: 103 IEGVQPTVPENPPP 116
I+GVQP +PENP P
Sbjct: 129 IDGVQPLIPENPIP 142
>gi|356527103|ref|XP_003532153.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 2 [Glycine max]
Length = 545
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 196/329 (59%), Gaps = 27/329 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P ++ +++ S KCM HS R L D+D AL ++N+EPIYG T + FK A+G
Sbjct: 31 PDLEYRIREIMQESVKCMRHSMRTFLTTEDVDTALALRNLEPIYGSTSNDPPQFKRAAGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
++L + D+K+VD +D++ PK+ L+T + +HWLAIEGVQP +PEN PV+ L
Sbjct: 91 -KDLFYIDDKDVDIKDIIEAPLPKAPLDTSITSHWLAIEGVQPAIPEN-APVEGIFTDLT 148
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV- 293
S++ K + G P KL VK L T EL QLYY++IT+ +
Sbjct: 149 P----SEIRKSEYKEDGLPVDVKLP---------VKHLITREL----QLYYEKITDLTLN 191
Query: 294 --GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
GS RR AL SLATD GLH ++P F+A+ V N+ NNLA+L LMR+V++LL
Sbjct: 192 KPGSIPFRR--ALVSLATDSGLHPLVPYFTFFVADEVAQNL--NNLAVLFALMRLVRSLL 247
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
N +++E YLH+L+P I++CIV+K++ R +D+HW LR+F++ L+ + + F +N
Sbjct: 248 QNSQIHIELYLHQLMPPIITCIVAKRIGNR-LSDDHWELRNFSANLVASICQRFGHIYHN 306
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+Q RVT+ ++ DP P YGAI G
Sbjct: 307 LQPRVTKTFLHSFLDPTKALPQHYGAIKG 335
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+SIGI NL D A L+ ++ Y + I+Q
Sbjct: 7 ETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESVKCMRHSMRTFLTTEDVDTALA 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG T + FK A+G ++L + D+K+VD +D++ PK+ L+T + +HWL
Sbjct: 67 LRNLEPIYGSTSNDPPQFKRAAGH-KDLFYIDDKDVDIKDIIEAPLPKAPLDTSITSHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|357459811|ref|XP_003600186.1| TATA binding protein-associated factor-like protein [Medicago
truncatula]
gi|355489234|gb|AES70437.1| TATA binding protein-associated factor-like protein [Medicago
truncatula]
Length = 510
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 190/336 (56%), Gaps = 33/336 (9%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P ++ +++ S KCM HS R L D D AL ++N+EPIYG + FK A+G
Sbjct: 31 PDLEYRIREIMQESIKCMRHSMRTFLTTDDFDTALALRNLEPIYGFASNDPPRFKKAAGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
+L + D+K+VD +DL+ PK+ L+T + +HWLAIEGVQP +PEN PP
Sbjct: 91 N-DLFYIDDKDVDIKDLVEADLPKAPLDTSITSHWLAIEGVQPAIPENAPP--------- 140
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV- 293
+ T K + K ++L V +K H ++ E QLYY++I E +
Sbjct: 141 -----------EASTEIKNSEYKEDRL----PVDIKLPVKHVITTELQLYYEKIIELILN 185
Query: 294 --GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
GS RR AL +LATD GLH ++P F+A+ V N+ NNL +L LMR+V++LL
Sbjct: 186 KSGSILFRR--ALVTLATDSGLHPLVPYFTRFVADEVARNL--NNLNILFALMRLVRSLL 241
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
N +++E YLH+L+P I++CIV+K++ R +DNHW LRDF++ L+ + K F +N
Sbjct: 242 QNPHIHIELYLHQLMPPIITCIVAKRIGNR-LSDNHWELRDFSANLVALICKRFGHMYHN 300
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTER 447
+Q RVT+ + DP P YGAI G + R
Sbjct: 301 LQPRVTKTFLHTFLDPTKALPQHYGAIKGIAALGSR 336
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 30/135 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
ES++VIA+++GI NL D A LS ++ Y + I+Q
Sbjct: 7 ESIEVIAQTLGINNLSSDVALALSPDLEYRIREIMQESIKCMRHSMRTFLTTDDFDTALA 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
PIYG + FK A+G +L + D+K+VD +DL+ PK+ L+T + +HWL
Sbjct: 67 LRNLEPIYGFASNDPPRFKKAAGHN-DLFYIDDKDVDIKDLVEADLPKAPLDTSITSHWL 125
Query: 102 AIEGVQPTVPENPPP 116
AIEGVQP +PEN PP
Sbjct: 126 AIEGVQPAIPENAPP 140
>gi|320168746|gb|EFW45645.1| transcription initiation factor TFIID complex 60 kDa subunit
[Capsaspora owczarzaki ATCC 30864]
Length = 541
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 182/333 (54%), Gaps = 31/333 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQ--FLPFKHASGGGRELHFTDEKE 185
S K M HS+R L D++ AL ++EP+YG S + K+A G+ F DE E
Sbjct: 40 SLKFMYHSRRHVLTTDDVNSALRAMDMEPLYGYGASAPPLVKRKNAPNSGQ---FEDE-E 95
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
VD L+ PK A HWLAIEGVQP +P+NPP ++ L D +
Sbjct: 96 VDLAALVAAPLPKVAPPVSYAAHWLAIEGVQPAIPQNPPMFGENRPMLNRTDKNLTV--- 152
Query: 246 DKDTSGKPTSAKLEK-----------------LRNVETVH-VKQLATHELSVEQQLYYKE 287
+ GKPT+A + V ++H +K L H LS E Q+YY+
Sbjct: 153 -VNAQGKPTTAAVGAGSGVAPPSSTTPLVAGTFPAVRSLHEIKHLVEHTLSKELQIYYER 211
Query: 288 ITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV 347
+ +A G ++ R AL SLA DPGLH+++P + FIA+ + N+ NNL +L+ +M M
Sbjct: 212 LVDAITGVNDNARQAALISLAADPGLHQLVPYLSQFIADKILQNL--NNLPMLMNIMLMT 269
Query: 348 KALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNT 407
KAL+ N L+LE Y+H+L+P++L+C++ K+LC R +NHWALR A+++++ + + +++
Sbjct: 270 KALVSNPELHLEPYIHQLMPAVLTCVLGKRLCQR-HTENHWALRVLAAQVVSIICRRYSS 328
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
S N +Q R + L DP S +GA+ G
Sbjct: 329 SHNQLQPRTAKTLLKVFLDPHKPLTSHFGAVVG 361
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 34 SDNITYCCKVI-IQPIYGLTVSQ--FLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKS 90
+D++ + + ++P+YG S + K+A G+ F DE EVD L+ PK
Sbjct: 54 TDDVNSALRAMDMEPLYGYGASAPPLVKRKNAPNSGQ---FEDE-EVDLAALVAAPLPKV 109
Query: 91 ALETHLRTHWLAIEGVQPTVPENPP 115
A HWLAIEGVQP +P+NPP
Sbjct: 110 APPVSYAAHWLAIEGVQPAIPQNPP 134
>gi|258571087|ref|XP_002544347.1| hypothetical protein UREG_03864 [Uncinocarpus reesii 1704]
gi|237904617|gb|EEP79018.1| hypothetical protein UREG_03864 [Uncinocarpus reesii 1704]
Length = 446
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 179/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE S K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RVSQVLEE-SHKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E HWLA+EGVQPT+P+NP D ++ LE I
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELI- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
+ G +A L + E V VK L H LS E QLY++ + A + S+
Sbjct: 152 -----------SKGPNANANLAAMSGNENVTVKPLVKHILSKELQLYFERVCSAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N+SL
Sbjct: 201 EEYRLSAFASLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQMMHMTEALIQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL G + H+ LRD A L+ +SK ++ S++ ++ R+
Sbjct: 259 YVDPYVASLIPPVLTCLIGRQLEGGSDPLEHFTLRDLAGSLIGMISKKYSHSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKNFMDPSKPFGTHYGAIIG 342
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K +AES+GI L D+ L+ ++ Y +
Sbjct: 7 DNIKDVAESVGINALNDEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE IS
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELIS 152
>gi|392865593|gb|EAS31391.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coccidioides immitis RS]
Length = 446
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE S K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RVSQVLEE-SHKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLKFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE I
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELI- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
+ G +A L + E V VK L H LS E QLY++ + A + S+
Sbjct: 152 -----------SKGPNANANLAAMSGNENVTVKPLVKHILSKELQLYFERVCSAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 EEYRLSAFASLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL G + +H+ LRD A L+ +SK ++ S++ ++ R+
Sbjct: 259 YVDPYVASLIPPVLTCVIGRQLEGGSDPLDHFTLRDLAGSLIGMISKKYSHSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKNFMDPSKPFGTHYGAIIG 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K +AES+GI L ++ L+ ++ Y +
Sbjct: 7 DNIKDVAESVGINALNEEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE IS
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELIS 152
>gi|303319711|ref|XP_003069855.1| TATA box binding protein associated factor containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109541|gb|EER27710.1| TATA box binding protein associated factor containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320034141|gb|EFW16086.1| TAF6 RNA polymerase 2 [Coccidioides posadasii str. Silveira]
Length = 446
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE S K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RVSQVLEE-SHKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLKFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE I
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELI- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
+ G +A L + E V VK L H LS E QLY++ + A + S+
Sbjct: 152 -----------SKGPNANANLAAMSGNENVTVKPLVKHILSKELQLYFERVCSAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 EEYRLSAFASLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL G + +H+ LRD A L+ +SK ++ S++ ++ R+
Sbjct: 259 YVDPYVASLIPPVLTCVIGRQLEGGSDPLDHFTLRDLAGSLIGMISKKYSHSSHRLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKNFMDPSKPFGTHYGAIIG 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K +AES+GI L ++ L+ ++ Y +
Sbjct: 7 DNIKDVAESVGINALNEEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE IS
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELIS 152
>gi|119183250|ref|XP_001242685.1| hypothetical protein CIMG_06581 [Coccidioides immitis RS]
Length = 1029
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE S K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RVSQVLEE-SHKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLKFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE I
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELI- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
+ G +A L + E V VK L H LS E QLY++ + A + S+
Sbjct: 152 -----------SKGPNANANLAAMSGNENVTVKPLVKHILSKELQLYFERVCSAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 EEYRLSAFASLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL G + +H+ LRD A L+ +SK ++ S++ ++ R+
Sbjct: 259 YVDPYVASLIPPVLTCVIGRQLEGGSDPLDHFTLRDLAGSLIGMISKKYSHSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKNFMDPSKPFGTHYGAIIG 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K +AES+GI L ++ L+ ++ Y +
Sbjct: 7 DNIKDVAESVGINALNEEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE IS
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELIS 152
>gi|326480649|gb|EGE04659.1| transcription initiation factor TFIID subunit 6 [Trichophyton
equinum CBS 127.97]
Length = 447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E HWLA+EGVQPT+P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTATDTRHLELVS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V++K L H LS E QLY++ + A + S+
Sbjct: 153 ------------KGPNANANLAAMSGNENVNIKPLVKHILSNELQLYFERVCNAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 201 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNI--KDIFVLTQVMHMIEALIRNPTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 259 YIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLVGMIAKKYSQSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKTFLDPGQTFGAHYGAIIG 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS ++ V + P+
Sbjct: 127 LAVEGVQPTIPQNPTATDTRHLELVSKGPNANANLAAMSGNENVNIKPL 175
>gi|326469026|gb|EGD93035.1| transcription initiation factor TFIID subunit 6 [Trichophyton
tonsurans CBS 112818]
Length = 447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E HWLA+EGVQPT+P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTAADTRHLELVS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V++K L H LS E QLY++ + A + S+
Sbjct: 153 ------------KGPNANANLAAMSGNENVNIKPLVKHILSNELQLYFERVCNAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 201 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNI--KDIFVLTQVMHMIEALIRNPTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 259 YIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLVGMIAKKYSQSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKTFLDPGQTFGAHYGAIIG 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS ++ V + P+
Sbjct: 127 LAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNIKPL 175
>gi|315049401|ref|XP_003174075.1| transcription initiation factor TFIID subunit 6 [Arthroderma
gypseum CBS 118893]
gi|311342042|gb|EFR01245.1| transcription initiation factor TFIID subunit 6 [Arthroderma
gypseum CBS 118893]
Length = 448
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E HWLA+EGVQPT+P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTSADTRHLELVS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V+VK L H LS E QLY++ + A + S+
Sbjct: 153 ------------KGPNANANLAAMSGNENVNVKPLVKHILSNELQLYFERVCNAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 201 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNI--KDIFVLTQVMHMIEALIRNPTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 259 YVDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLVGMIAKKYSQSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKTFLDPGQTFGAHYGAIIG 342
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS ++ V + P+
Sbjct: 127 LAVEGVQPTIPQNPTSADTRHLELVSKGPNANANLAAMSGNENVNVKPL 175
>gi|452840986|gb|EME42923.1| hypothetical protein DOTSEDRAFT_72382 [Dothistroma septosporum
NZE10]
Length = 447
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 183/333 (54%), Gaps = 23/333 (6%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGG 175
V+ Q+L + K M H+KR L DI AL + ++EP+YG ++ L F AS G G
Sbjct: 33 VEYRVQQLIEEALKFMRHAKRTTLTTQDISQALRVLDVEPLYGYESTRPLRFGEASIGPG 92
Query: 176 RELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 235
+ L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D+ Q+L++
Sbjct: 93 QPLFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTQADQRNQELQA 152
Query: 236 IDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS 295
G T A + NV+ VK L H LS E QLY++ I A +
Sbjct: 153 ------------KGQGANTLAAMSGNDNVQ---VKNLVKHVLSKELQLYFERICAAIL-- 195
Query: 296 DEGR---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLD 352
DEG R A SL TDPGLH+++P F+A+ V N+ +L +L M++V ALL+
Sbjct: 196 DEGNEEYRAAAFSSLQTDPGLHQLVPYFIQFVADKVTHNL--KSLFILTQSMQLVAALLE 253
Query: 353 NQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNI 412
N SLY+ Y+ L+PS+L+C+V K L D H++LRD+AS LL+ +++ + S++ +
Sbjct: 254 NPSLYIAPYVPSLVPSVLTCLVGKHLGPSNAGDIHFSLRDYASSLLSSIARKYGPSSSTL 313
Query: 413 QTRVTRLLSNAINDPKINFPSLYGAIAGEGLVT 445
+ R+ R D + YGA+ G ++
Sbjct: 314 KPRIARSCLKHFLDSHKPLGTHYGAVLGLTMIA 346
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 30/141 (21%)
Query: 16 IAESIGIPNLPDDAAKELSDNITYCCKVIIQ----------------------------- 46
+AES+GI L D A+ L+ ++ Y + +I+
Sbjct: 12 VAESVGIAALNRDVAEHLARDVEYRVQQLIEEALKFMRHAKRTTLTTQDISQALRVLDVE 71
Query: 47 PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HWLA+EG
Sbjct: 72 PLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEG 131
Query: 106 VQPTVPENPPPVDKSAQKLES 126
VQP++P+NP D+ Q+L++
Sbjct: 132 VQPSIPQNPTQADQRNQELQA 152
>gi|255952885|ref|XP_002567195.1| Pc21g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588906|emb|CAP95021.1| Pc21g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 442
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + KCM H KR L DI AL ++EP+YG ++ L F AS G G+
Sbjct: 36 RVAQVLEE-ALKCMRHCKRTVLTTQDIALALRNLDVEPLYGYDSTRPLKFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D ++ LE +
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREVSFTAHWLAVEGVQPSIPQNPTAAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
+ G ++ L + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANSTLAAISGTGDVAVKPLVKHVLSRELQLYFEKVCSAFLHETS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FIAE KV N+ +L +M M +AL+ NQSL
Sbjct: 201 EDYRTSGYSSLREDPGLHQLVPYFVQFIAE--KVTHSLKNVFVLTQVMHMAEALVQNQSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+PSIL+C++ +QL G + +ALRD A+ LL+ ++K ++ S++ ++ R+
Sbjct: 259 YVDPYIASLVPSILTCLIGRQLGGTADLVESFALRDMAASLLSLIAKKYSHSSHMLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGA+ G
Sbjct: 319 VRSCLKTFLDPSKPFGAHYGAVIG 342
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY---------------CCKVI----------- 44
++++ +AES+GI NL +D + L+ ++ Y C + +
Sbjct: 7 DNIRDVAESVGILNLNNDVTENLARDVEYRVAQVLEEALKCMRHCKRTVLTTQDIALALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 NLDVEPLYGYDSTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREVSFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQP++P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPSIPQNPTAAD--SRNLELVS 152
>gi|406608131|emb|CCH40565.1| Transcription initiation factor TFIID subunit 6 [Wickerhamomyces
ciferrii]
Length = 481
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 183/324 (56%), Gaps = 15/324 (4%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA-SGGGRELHFTDEKEV 186
S K M HSKR L D++ +L + N+EP+YG VS+ L FK A G G+ L++ D++EV
Sbjct: 62 SVKFMRHSKRKTLTTNDVEKSLKVLNVEPLYGYDVSRPLNFKEALVGNGQTLYYVDDEEV 121
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL---- 242
DFE L+ PK + HWL+IEGVQP +P+NP + +Q S I+ +
Sbjct: 122 DFEKLINQPLPKVPRSSTFTAHWLSIEGVQPAIPQNPLESEIRSQLPVSRGAITNVLNGN 181
Query: 243 -GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF 301
+T+G T+A + +T +K L H LS E QLY+ ++ +A ++
Sbjct: 182 DAVTSNNTTGSNTNAGSTGVSAKDT-EIKPLVKHVLSKELQLYFDKVIQALTNQEDNEEV 240
Query: 302 -----EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
AL SL +DPGLH+++P FI+E + N NN+ALL ++ ++ +LL N ++
Sbjct: 241 LHLKQAALTSLRSDPGLHQLVPYFVQFISEQITHN--SNNIALLSTMLEVIYSLLSNSNI 298
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
+L+ Y+H L+P IL+ +++K++ G D H+A+RDFAS LL V K++ + ++ RV
Sbjct: 299 FLDPYIHALMPCILTLLLAKRI-GSQNDDEHFAVRDFASSLLEHVCKHYGKAYTTLKPRV 357
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
TR L D +LYGAI G
Sbjct: 358 TRTLLKTFLDSNKPVGTLYGAIIG 381
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 30/135 (22%)
Query: 10 IESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CC 41
I+++K +A+S+G+ +L D+A + L+ ++ Y
Sbjct: 24 IDTVKDVADSLGLTDLNDEALRNLAMDVEYRIHEILEQSVKFMRHSKRKTLTTNDVEKSL 83
Query: 42 KVI-IQPIYGLTVSQFLPFKHA-SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
KV+ ++P+YG VS+ L FK A G G+ L++ D++EVDFE L+ PK + H
Sbjct: 84 KVLNVEPLYGYDVSRPLNFKEALVGNGQTLYYVDDEEVDFEKLINQPLPKVPRSSTFTAH 143
Query: 100 WLAIEGVQPTVPENP 114
WL+IEGVQP +P+NP
Sbjct: 144 WLSIEGVQPAIPQNP 158
>gi|115433052|ref|XP_001216663.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189515|gb|EAU31215.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 445
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 178/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L DI AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDISQALRVLDVEPLYGYETTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELLS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G ++ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNANSTLAAMSGSANVAVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV ++ +L +MRM +AL+ N+SL
Sbjct: 201 EEYRTSAYSSLREDPGLHQLVPYFVQFISE--KVTHGMKDIFVLTQVMRMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G + +ALRD A+ LL ++K ++ S++ ++ R+
Sbjct: 259 YVDPYIASLVPPILTCLIGRQLGGNADLSEQFALRDLAASLLGLIAKKYSHSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARSCLKTFLDPLKPFGAQYGAIIG 342
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDISQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS S V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADSRNLELLSKGPNANSTLAAMSGSANVAVKPL 175
>gi|213409241|ref|XP_002175391.1| transcription initiation factor TFIID subunit 6
[Schizosaccharomyces japonicus yFS275]
gi|212003438|gb|EEB09098.1| transcription initiation factor TFIID subunit 6
[Schizosaccharomyces japonicus yFS275]
Length = 458
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 172/317 (54%), Gaps = 12/317 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--SGGGRELHFTDEKE 185
+ K M HSKR L DI AL N+EP+YG ++ + F A G L++ D++E
Sbjct: 46 AIKFMRHSKRRVLTNSDISAALRTLNVEPLYGFNSNEPVVFNEAPLGPGQSSLYYLDDEE 105
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
+DFE ++ PK + HWLAIEGVQPT+P+NP D S D +K G
Sbjct: 106 IDFEKVINAPLPKIPRDITYTAHWLAIEGVQPTIPQNPTTADHSGA---GGDWSAKAGAA 162
Query: 246 D-KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEGRRFEA 303
K GK TS NVE VK L H LS E QLY++ I A + S+ R A
Sbjct: 163 GVKSAGGKSTSDVFPSADNVE---VKPLVRHVLSKELQLYFERIANALLSDSNAELRNAA 219
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L SL TDPGLH++LP F+++ V N+ +N+ L LM+M +LLDN +L++E Y+H
Sbjct: 220 LSSLRTDPGLHQLLPYFIIFLSDSVTQNLSNHNV--LKTLMQMAWSLLDNPNLFVEPYIH 277
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+L+P IL+C+V+K L H+ LRDFA+ LL + F ++ RVTR L A
Sbjct: 278 QLIPPILTCMVAKYLGPGGLDTEHYELRDFAAYLLGIICDRFGDVYYTLKPRVTRTLLKA 337
Query: 424 INDPKINFPSLYGAIAG 440
D F + YGAI G
Sbjct: 338 FLDNTKPFTTHYGAIIG 354
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 31/147 (21%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------- 46
T ++ +S+K +AE +GI NL DD AK ++ ++ Y IIQ
Sbjct: 4 TIWNTDSIKDLAEMLGIGNLGDDVAKAIAMDLEYRIHQIIQEAIKFMRHSKRRVLTNSDI 63
Query: 47 ----------PIYGLTVSQFLPFKHA--SGGGRELHFTDEKEVDFEDLLTNLNPKSALET 94
P+YG ++ + F A G L++ D++E+DFE ++ PK +
Sbjct: 64 SAALRTLNVEPLYGFNSNEPVVFNEAPLGPGQSSLYYLDDEEIDFEKVINAPLPKIPRDI 123
Query: 95 HLRTHWLAIEGVQPTVPENPPPVDKSA 121
HWLAIEGVQPT+P+NP D S
Sbjct: 124 TYTAHWLAIEGVQPTIPQNPTTADHSG 150
>gi|324511760|gb|ADY44890.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 452
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 176/319 (55%), Gaps = 16/319 (5%)
Query: 134 HSKRVKLLPVDIDDALNMKNIEPIYGLTVSQ-FLPFKHASGGG----RELHFTDEKEVDF 188
H +R L DI+ A + E I G S+ + +K + E+ ++ EVD
Sbjct: 63 HCRRAHLTTDDIESAFRIFGQEAILGHDNSRKSVVYKSVADSAEMLDHEVFIAEDAEVDM 122
Query: 189 EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE-------SIDPISK 241
+ + PK L +R HWL +G Q VP+NP V K +LE +I S+
Sbjct: 123 AAIANSKPPKPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLEEHEERFNAIPTSSR 182
Query: 242 LGKKDKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
+ +SG + +L R E ++VK ++H+LS+EQQ +++++ EACVG D+ R
Sbjct: 183 RESLTQMSSGASIAYRLAMRSTRKAERIYVKPSSSHQLSLEQQRFFRDVLEACVGLDDKR 242
Query: 300 RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
R EAL+SL D GL +LP + ++A+GV N++Q +LA+LIY++ ALL N+SL +
Sbjct: 243 RVEALESLQMDTGLQSLLPNISRWLAQGVYANIIQRSLAMLIYIVHAHAALLHNRSLDIH 302
Query: 360 KYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
LHE++PS+LSC++S+QLC RP+ DNHW LRDFAS+ L Q+ + + Q RV +
Sbjct: 303 PVLHEMVPSLLSCMISRQLCSRPDIDNHWTLRDFASKCLVQLVREHGVC--DTQKRVQQA 360
Query: 420 LSNAINDPKINFPSLYGAI 438
L + + YGA
Sbjct: 361 LRYCFMNSSSSANMRYGAF 379
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 41/164 (25%)
Query: 13 MKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTV-------------SQFLPF 59
+KV++E +GI +L +D ++++TY K +++ L V S F F
Sbjct: 22 VKVVSEQLGIASLSEDCCNITAEHVTYSIKTLLEQAKKLAVHCRRAHLTTDDIESAFRIF 81
Query: 60 KHASGGGR---------------------ELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
+ G E+ ++ EVD + + PK L +R
Sbjct: 82 GQEAILGHDNSRKSVVYKSVADSAEMLDHEVFIAEDAEVDMAAIANSKPPKPPLCPMIRA 141
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLP 142
HWL +G Q VP+NP V K +LE H +R +P
Sbjct: 142 HWLVYDGEQIYVPQNPIIVPKRIVRLE-------EHEERFNAIP 178
>gi|296817097|ref|XP_002848885.1| transcription initiation factor TFIID subunit 6 [Arthroderma otae
CBS 113480]
gi|238839338|gb|EEQ29000.1| transcription initiation factor TFIID subunit 6 [Arthroderma otae
CBS 113480]
Length = 446
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADTRHLELVS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V++K L H LS E QLY++ + A + S+
Sbjct: 153 ------------KGPNANANLAAMSGNENVNIKPLVKHILSNELQLYFERVCNAFLDDSN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 201 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNM--KDIFVLTQVMHMIEALIRNPTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 259 YVDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLVGMIAKKYSPSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARTFLKTFLDPGQTFGAHYGAIIG 342
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGISSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS ++ V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNIKPL 175
>gi|425774639|gb|EKV12941.1| Transcription initiation factor TFIID complex 60 kDa subunit
[Penicillium digitatum Pd1]
gi|425776498|gb|EKV14715.1| Transcription initiation factor TFIID complex 60 kDa subunit
[Penicillium digitatum PHI26]
Length = 442
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 179/324 (55%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M H KR L DI AL ++EP+YG ++ L F AS G G+
Sbjct: 36 RVAQVLEE-ALKSMRHCKRTVLTTQDIALALRNLDVEPLYGYDSTRPLKFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D +++
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREVSFTAHWLAVEGVQPSIPQNPTAADS-----RNLE 149
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
+SK G ++ L + V VK L H LS E QLY++++ A + +
Sbjct: 150 LVSK---------GPNANSTLAAISGTGDVAVKPLVKHVLSRELQLYFEKVCSAFLHETS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FIAE KV N+ +L +M M +AL+ NQSL
Sbjct: 201 EDYRTSGYSSLREDPGLHQLVPYFVQFIAE--KVTHSLKNVFVLTQVMHMAEALVQNQSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+PSIL+C++ +QL G + +ALRD A+ LL+ ++K ++ S++ ++ R+
Sbjct: 259 YVDPYIASLVPSILTCLIGRQLGGTADLVESFALRDMAASLLSLIAKKYSHSSHMLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 VRSCLKTFLDPSKPFGAHYGAIIG 342
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY---------------CCKVI----------- 44
++++ +AES+GI NL +D + L+ ++ Y C + +
Sbjct: 7 DNIRDVAESVGILNLNNDVTENLARDVEYRVAQVLEEALKSMRHCKRTVLTTQDIALALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 NLDVEPLYGYDSTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREVSFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQP++P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPSIPQNPTAAD--SRNLELVS 152
>gi|358371612|dbj|GAA88219.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus kawachii IFO 4308]
Length = 447
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 176/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L D+ AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RVAQVLEE-ALKFMRHSRRTLLTTQDVAQALRVLDVEPLYGYESTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ P+ E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDEEVDFEKLINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNMELMS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G S+ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNASSTLAAMSGGGNVSVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SL
Sbjct: 201 EEYRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDVFVLTQVMHMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G E +ALRD A+ LL ++K ++ S++ ++ R+
Sbjct: 259 YVDPYIASLVPPILTCLIGRQLGGSAELTEQFALRDLAASLLGLIAKKYSNSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGA+ G
Sbjct: 319 ARSCLKTFLDPSKPFGAHYGAVIG 342
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+G+ NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGVVNLSNDVTENLARDVEYRVAQVLEEALKFMRHSRRTLLTTQDVAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL------ESISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGGGNVSVKPL 175
>gi|317031631|ref|XP_001393919.2| transcription initiation factor TFIID complex subunit [Aspergillus
niger CBS 513.88]
gi|350640200|gb|EHA28553.1| hypothetical protein ASPNIDRAFT_56887 [Aspergillus niger ATCC 1015]
Length = 447
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 176/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L D+ AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDVAQALRVLDVEPLYGYESTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ P+ E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDEEVDFEKLINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNMELMS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G S+ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNASSTLAAMSGGGNVSVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SL
Sbjct: 201 EEYRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDVFVLTQVMHMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G E +ALRD A+ LL ++K ++ S++ ++ R+
Sbjct: 259 YVDPYIASLVPPILTCLIGRQLGGSAELTEQFALRDLAASLLGLIAKKYSNSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGA+ G
Sbjct: 319 ARSCLKTFLDPSKPFGAHYGAVIG 342
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+G+ NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGVVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDVAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL------ESISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGGGNVSVKPL 175
>gi|134078474|emb|CAL00337.1| unnamed protein product [Aspergillus niger]
Length = 449
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 175/322 (54%), Gaps = 19/322 (5%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M HS+R L D+ AL + ++EP+YG ++ L F AS G G+ L
Sbjct: 38 AQVLEE-ALKFMRHSRRTLLTTQDVAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLF 96
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ P+ E HWLA+EGVQP++P+NP D +L S
Sbjct: 97 YVEDEEVDFEKLINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNMELMS---- 152
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEG 298
G S+ L + V VK L H LS E QLY++++ A + S E
Sbjct: 153 ----------KGPNASSTLAAMSGGGNVSVKPLVKHVLSKELQLYFEKVCNAFLDESSEE 202
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SLY+
Sbjct: 203 YRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDVFVLTQVMHMAEALVQNKSLYV 260
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
+ Y+ L+P IL+C++ +QL G E +ALRD A+ LL ++K ++ S++ ++ R+ R
Sbjct: 261 DPYIASLVPPILTCLIGRQLGGSAELTEQFALRDLAASLLGLIAKKYSNSSHTLKPRLAR 320
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP F + YGA+ G
Sbjct: 321 SCLKTFLDPSKPFGAHYGAVIG 342
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+G+ NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGVVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDVAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL------ESISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGGGNVSVKPL 175
>gi|449529832|ref|XP_004171902.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 294
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 168/290 (57%), Gaps = 27/290 (9%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EP+YG L FK A G
Sbjct: 31 PDVEYRLREIMQEAIKCMRHSKRTTLTANDVDGALNLRNVEPMYGFASGGPLRFKRAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L + ++K+++F+D++ PK+ +T + HWLAIEGVQP +PEN P +E
Sbjct: 91 -RDLFYLEDKDLEFKDIIDAPLPKAPFDTAVFCHWLAIEGVQPAIPENAP--------VE 141
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
I P S K ++ G P KL H LS E QLY+ +ITE V
Sbjct: 142 VILPPSD-AKSNEQMGGLPVDIKLP-------------VKHILSKELQLYFDKITELVVS 187
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SLATD GLH ++P FIA+ V + + +LL LMR+V +LL N
Sbjct: 188 RSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGL--GDYSLLFALMRVVWSLLQN 245
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
+++E YLH+++PS+++C+V+K+L G +DNHW LRDF ++++ + K
Sbjct: 246 PHIHIEPYLHQMMPSVVTCLVAKRL-GNRFSDNHWELRDFTAKVVALICK 294
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++VIA+ IGI NL D A +++ ++ Y + I+Q
Sbjct: 7 ENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTANDVDGALN 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG L FK A G R+L + ++K+++F+D++ PK+ +T + HWL
Sbjct: 67 LRNVEPMYGFASGGPLRFKRAIGH-RDLFYLEDKDLEFKDIIDAPLPKAPFDTAVFCHWL 125
Query: 102 AIEGVQPTVPENPP 115
AIEGVQP +PEN P
Sbjct: 126 AIEGVQPAIPENAP 139
>gi|324506090|gb|ADY42608.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 346
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 158/271 (58%), Gaps = 11/271 (4%)
Query: 177 ELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE-- 234
E+ ++ EVD + + PK L +R HWL +G Q VP+NP V K +LE
Sbjct: 5 EVFIAEDAEVDMAAIANSKPPKPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLEEH 64
Query: 235 -----SIDPISKLGKKDKDTSGKPTSAKL--EKLRNVETVHVKQLATHELSVEQQLYYKE 287
+I S+ + +SG + +L R E ++VK ++H+LS+EQQ ++++
Sbjct: 65 EERFNAIPTSSRRESLTQMSSGASIAYRLAMRSTRKAERIYVKPSSSHQLSLEQQRFFRD 124
Query: 288 ITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV 347
+ EACVG D+ RR EAL+SL D GL +LP + ++A+GV N++Q +LA+LIY++
Sbjct: 125 VLEACVGLDDKRRVEALESLQMDTGLQSLLPNISRWLAQGVYANIIQRSLAMLIYIVHAH 184
Query: 348 KALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNT 407
ALL N+SL + LHE++PS+LSC++S+QLC RP+ DNHW LRDFAS+ L Q+ +
Sbjct: 185 AALLHNRSLDIHPVLHEMVPSLLSCMISRQLCSRPDIDNHWTLRDFASKCLVQLVREHGV 244
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
+ Q RV + L + + YGA
Sbjct: 245 C--DTQKRVQQALRYCFMNSSSSANMRYGAF 273
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 68 ELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 127
E+ ++ EVD + + PK L +R HWL +G Q VP+NP V K +LE
Sbjct: 5 EVFIAEDAEVDMAAIANSKPPKPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLE-- 62
Query: 128 SFKCMSHSKRVKLLP 142
H +R +P
Sbjct: 63 -----EHEERFNAIP 72
>gi|121718305|ref|XP_001276165.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus clavatus NRRL 1]
gi|119404363|gb|EAW14739.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus clavatus NRRL 1]
Length = 448
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 175/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L D+ AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDVAQALRVLDVEPLYGYETTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELTS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G ++ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNANSTLAAMSGTGNVAVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SL
Sbjct: 201 EEYRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDIFVLTQVMHMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G + +ALRD A+ LL +SK ++ S++ + R+
Sbjct: 259 YVDPYVASLVPPILTCLIGRQLGGNTDLSGQFALRDLAASLLGLISKKYSHSSHTLTPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGA+ G
Sbjct: 319 ARSCLKTFLDPSKPFGAHYGAVIG 342
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGIVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDVAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS + V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADSRNLELTSKGPNANSTLAAMSGTGNVAVKPL 175
>gi|453083775|gb|EMF11820.1| transcription initiation factor TFIID complex 60 kDa subunit
[Mycosphaerella populorum SO2202]
Length = 452
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 179/327 (54%), Gaps = 24/327 (7%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L DI AL + ++EP+YG ++ L F AS G G+
Sbjct: 37 RISQVLEE-ALKFMRHAKRTTLTTQDISQALRVLDVEPLYGYESTRPLRFGEASIGPGQP 95
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D+ Q+L
Sbjct: 96 LFYVEDEEVDFEKLINAPLPKVPREISFTGHWLAVEGVQPSIPQNPTQADQRGQEL---- 151
Query: 238 PISKLGKKDKDTSGKPTSAK-LEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD 296
+GK A L L + V VK L H LS E QLY++ I A + D
Sbjct: 152 ------------AGKGQGANTLAALSGNDNVAVKPLVKHVLSKELQLYFERICAAILDED 199
Query: 297 EGR-RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQS 355
+ A SL +DPGLH+++P FIA+ KV +L +L MRMV++LL N S
Sbjct: 200 NMEYQTAAFASLRSDPGLHQLVPYFIQFIAD--KVTHGLKSLFILAQSMRMVESLLANAS 257
Query: 356 LYLEKYLHELLPSILSCIVSKQL--CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
LY+ Y+ L+P+IL+C+V K L + + + H+ALR F+S LL ++++ + S++ ++
Sbjct: 258 LYIAPYVSALIPAILTCVVGKHLGAASKDQGEGHYALRAFSSSLLLRIAQKYGDSSSTLK 317
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R D + + YGA+ G
Sbjct: 318 PRIARACLKHFLDSHKPYGTHYGAVLG 344
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++ +AES+GI L + A+ L+ ++ Y +
Sbjct: 8 ENVTDVAESVGIAALNREVAEHLARDVEYRISQVLEEALKFMRHAKRTTLTTQDISQALR 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 68 VLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTGHW 127
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LA+EGVQP++P+NP D+ Q+L
Sbjct: 128 LAVEGVQPSIPQNPTQADQRGQEL 151
>gi|452982675|gb|EME82434.1| hypothetical protein MYCFIDRAFT_154945 [Pseudocercospora fijiensis
CIRAD86]
Length = 449
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 177/324 (54%), Gaps = 21/324 (6%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H+KR L DI AL + ++EP+YG ++ L F AS G G+ L
Sbjct: 38 AQVLEE-ALKFMRHAKRTTLTTQDISQALRVLDVEPLYGYDSTRPLRFGEASIGQGQPLF 96
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP D+ Q+L +
Sbjct: 97 YVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTQADQRNQELAA---- 152
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEG 298
K PT A + NV VK L H LS E QLY+ I A + ++E
Sbjct: 153 -------KGQGANPTLAAMSGNDNVS---VKPLVKHVLSKELQLYFDRICTAIMDENNED 202
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
R A SL TDPGLH+++P F+A+ KV +L +L M+++ +LLDN SLY+
Sbjct: 203 NRLAAFASLRTDPGLHQLVPYFIQFVAD--KVTHHMKSLFILTQSMQLLASLLDNPSLYI 260
Query: 359 EKYLHELLPSILSCIVSKQL--CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y+ ++P +L+C+V K L A H++LRD+++ LL+ +++ F S++ ++ R+
Sbjct: 261 APYVPSVIPCVLTCLVGKHLGSANSDGATTHFSLRDYSASLLSTIARKFGPSSSTLKPRI 320
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R D F + YGA+ G
Sbjct: 321 ARSCLKHFLDSHKPFGTHYGAVLG 344
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 30/146 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++ +AES+GI +L + ++ L+ ++ Y +
Sbjct: 7 ENVTDVAESVGIASLNKEVSEHLARDVEYRIAQVLEEALKFMRHAKRTTLTTQDISQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYDSTRPLRFGEASIGQGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES 126
LA+EGVQP++P+NP D+ Q+L +
Sbjct: 127 LAVEGVQPSIPQNPTQADQRNQELAA 152
>gi|119498819|ref|XP_001266167.1| transcription initiation factor TFIID complex 60 kDa subunit
[Neosartorya fischeri NRRL 181]
gi|119414331|gb|EAW24270.1| transcription initiation factor TFIID complex 60 kDa subunit
[Neosartorya fischeri NRRL 181]
Length = 445
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 175/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L D+ AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDVAQALRVLDVEPLYGYETTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D +L +
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELTA-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G ++ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNANSTLAAMSGTGNVAVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SL
Sbjct: 201 EEYRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDIFVLTQVMHMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G + +ALRD A+ LL +SK ++ S++ + R+
Sbjct: 259 YVDPYIASLVPPILTCLIGRQLGGNADLSEQFALRDLAASLLGLISKKYSHSSHTLTPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGA+ G
Sbjct: 319 ARSCLKTFLDPSKPFGAHYGAVIG 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 30/138 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGIVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDVAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVD 118
LA+EGVQP++P+NP D
Sbjct: 127 LAVEGVQPSIPQNPTAAD 144
>gi|70984940|ref|XP_747976.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus Af293]
gi|66845604|gb|EAL85938.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus Af293]
gi|159126099|gb|EDP51215.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus A1163]
Length = 445
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 174/324 (53%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L D+ AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDVAQALRVLDVEPLYGYETTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D +L +
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELTA-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G ++ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNANSTLAAMSGTGDVAVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SL
Sbjct: 201 EEYRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDIFVLTQVMHMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G + +ALRD A LL +SK ++ S++ + R+
Sbjct: 259 YVDPYIASLVPPILTCLIGRQLGGNADLSEQFALRDLAGSLLGLISKKYSHSSHTLTPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARSCLKTFLDPSKPFGAHYGAIIG 342
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 30/138 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGIVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDVAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVD 118
LA+EGVQP++P+NP D
Sbjct: 127 LAVEGVQPSIPQNPTAAD 144
>gi|42495554|gb|AAS17938.1| TATA binding protein associated factor 6b isoform 1 [Arabidopsis
thaliana]
Length = 504
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 182/327 (55%), Gaps = 38/327 (11%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H++R L+ D+D AL+ +N+EP G S+ + FK A
Sbjct: 29 PDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSG---SKSMRFKRAPEN 85
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L+F D+K+V+ ++++ P + + + +HWLAI+G+QP++P+N P L+
Sbjct: 86 -RDLYFFDDKDVELKNVIEAPLPNAPPDASVFSHWLAIDGIQPSIPQNSP--------LQ 136
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+I + + KD + + LS + Q+Y+ ++TE +
Sbjct: 137 AISDLKRSEYKDDGLAARQV----------------------LSKDLQIYFDKVTEWALT 174
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N
Sbjct: 175 QSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHN 232
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+
Sbjct: 233 PHVHIEPYLHQLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLL 291
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
RVTR L + DP P YGAI G
Sbjct: 292 PRVTRSLLHTFLDPTKALPQHYGAIQG 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 25/130 (19%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------PIYGLTVSQFLP 58
ES++VIA+SIG+ L D + L+ ++ Y + ++Q + V L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALH 64
Query: 59 FKH---ASGG----------GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
F++ SG R+L+F D+K+V+ ++++ P + + + +HWLAI+G
Sbjct: 65 FRNLEPTSGSKSMRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFSHWLAIDG 124
Query: 106 VQPTVPENPP 115
+QP++P+N P
Sbjct: 125 IQPSIPQNSP 134
>gi|212535258|ref|XP_002147785.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces marneffei ATCC 18224]
gi|210070184|gb|EEA24274.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces marneffei ATCC 18224]
Length = 447
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 175/325 (53%), Gaps = 20/325 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M H +R L DI AL + N+EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHGRRTVLTTQDISHALRVLNVEPLYGYESTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP +P+N P ++ LE +
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREVTFTAHWLAVEGVQPLIPQN--PTSNESRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G + L + + VK L H LS E QLY++++ A + S
Sbjct: 152 -----------AKGPNANPNLAAMSGNQNTAVKPLVKHILSKELQLYFEKVCNAFLDPSS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FIAE KV NN+ +L +MRM +AL+ NQ L
Sbjct: 201 EEYRTSAYSSLREDPGLHQLVPYFVQFIAE--KVTHSLNNIFVLTQVMRMAEALIQNQFL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCG-RPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR 415
Y++ Y+ L+P +L+C+V +Q G E +ALR+ A+ LL +SK ++ +++ ++ R
Sbjct: 259 YIDPYISALVPPVLTCLVGRQFGGSNNELSEQFALRELAASLLGMISKKYSHASHTLKPR 318
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
+ R DP F + YGAI G
Sbjct: 319 IARSCLKNFLDPAKPFGTHYGAIMG 343
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGISNLSKDVTENLARDVEYRIAQVLEEALKFMRHGRRTVLTTQDISHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLNVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREVTFTAHW 126
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP +P+NP
Sbjct: 127 LAVEGVQPLIPQNP 140
>gi|255580776|ref|XP_002531209.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223529211|gb|EEF31186.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 468
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 165/288 (57%), Gaps = 29/288 (10%)
Query: 154 IEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 213
++P+YGL L FK A+G ++L++ D+K+V+F+D++ PK+ L+T + HWLAIE
Sbjct: 1 MQPVYGLASGDPLRFKRAAGY-KDLYYIDDKDVEFKDVVEAPLPKAPLDTSISVHWLAIE 59
Query: 214 GVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLA 273
GVQP +PEN P + + GK + K + L V VK
Sbjct: 60 GVQPAIPENAP--------------------VEASSDGKKSEYKEDGL----PVDVKLPV 95
Query: 274 THELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNV 332
H LS E QLY+ +ITE + + F +AL SLATD GLH ++P IA+ V N+
Sbjct: 96 KHVLSRELQLYFDKITELTMRKSDSILFKQALSSLATDSGLHPLVPYFIYLIADEVARNL 155
Query: 333 VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
NN ++L LMR+ ++LL N +++E YLH+L+PSI++C+V+K+ G DNH LRD
Sbjct: 156 --NNFSVLFALMRVARSLLQNPHIHVEPYLHQLMPSIITCLVAKR-SGNRFCDNHLELRD 212
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
F + L+ + K F +N+Q RVTR L + DP + P YGAI G
Sbjct: 213 FTANLVASICKRFGHVYHNLQPRVTRTLLHTFLDPLKSLPQHYGAIQG 260
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
+QP+YGL L FK A+G ++L++ D+K+V+F+D++ PK+ L+T + HWLAIE
Sbjct: 1 MQPVYGLASGDPLRFKRAAGY-KDLYYIDDKDVEFKDVVEAPLPKAPLDTSISVHWLAIE 59
Query: 105 GVQPTVPENPP 115
GVQP +PEN P
Sbjct: 60 GVQPAIPENAP 70
>gi|330846367|ref|XP_003295007.1| TATA-binding protein-associated-factor [Dictyostelium purpureum]
gi|325074402|gb|EGC28467.1| TATA-binding protein-associated-factor [Dictyostelium purpureum]
Length = 518
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 190/348 (54%), Gaps = 40/348 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYG----LTVSQFLPFKHASGGGRELHFTDE 183
+ K M HSKR L DI++AL +KN+E +YG ++ + L F+ + + +++ ++
Sbjct: 44 AIKFMKHSKRDHLSCDDINNALGLKNVEVLYGYNSCVSDNSLLKFQKTTTSTQAIYYLND 103
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD-----KSAQKLESIDP 238
KE+ F++++ PK E L HWLA+EGVQP +P+NP P + K+ K +
Sbjct: 104 KELTFQEVMNQPLPKVPREPTLSAHWLALEGVQPLIPQNPSPYEIEEHFKNLNKKFKSEK 163
Query: 239 ISKLGKKDKDTSGK----PTSAKLEKLRNVETVHVKQ--------------------LAT 274
++L +T+ P++ + N+ T KQ
Sbjct: 164 ANQLAASSSNTANGTNVPPSTNNILSKPNIATQQQKQEPSIPGIHTLPSVTTTVVKPTVK 223
Query: 275 HELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ 334
H LS E Q++Y++IT + G ++ A+ SL D LH++LP FI+ V V Q
Sbjct: 224 HILSKEIQMFYEKITNSIKGDNQKLFNAAIHSLKNDSSLHQLLPYFINFIS----VQVTQ 279
Query: 335 N--NLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
N NL LL+ LM+M +A+L+++ L E YLH+L+P IL+C+V K+LC P DNHW LRD
Sbjct: 280 NLTNLNLLMKLMKMSQAILESKHLKPELYLHQLMPPILTCLVGKKLCTSP-MDNHWELRD 338
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
F+++L+T + + F S +++Q+R+T+ L ++D + YGA+ G
Sbjct: 339 FSAQLVTFICRKFGDSYSSLQSRITKTLVQTLHDTTKPLTTHYGAVVG 386
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 33/141 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQP----------------------- 47
+++K+IAES GI NLPD+ A +L+ ++ Y + I Q
Sbjct: 7 DTIKIIAESAGISNLPDEIASQLASDVEYRIREIAQEAIKFMKHSKRDHLSCDDINNALG 66
Query: 48 ------IYG----LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
+YG ++ + L F+ + + +++ ++KE+ F++++ PK E L
Sbjct: 67 LKNVEVLYGYNSCVSDNSLLKFQKTTTSTQAIYYLNDKELTFQEVMNQPLPKVPREPTLS 126
Query: 98 THWLAIEGVQPTVPENPPPVD 118
HWLA+EGVQP +P+NP P +
Sbjct: 127 AHWLALEGVQPLIPQNPSPYE 147
>gi|334183298|ref|NP_974024.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194964|gb|AEE33085.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 527
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 214/431 (49%), Gaps = 95/431 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFKHASGGGRELH 70
ES++VIA+SIG+ L D + L+ ++ Y + ++Q + L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQVYHQL------------------- 45
Query: 71 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFK 130
++ F L+++L + L+ E+I K
Sbjct: 46 -----QLYFCPLISSLTCRRNLQ-------------------------------EAI--K 67
Query: 131 CMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFED 190
CM H++R L+ D+D AL+ +N+EP G S+ + FK A R+L+F D+K+V+ ++
Sbjct: 68 CMRHARRTTLMAHDVDSALHFRNLEPTSG---SKSMRFKRAPEN-RDLYFFDDKDVELKN 123
Query: 191 LLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTS 250
++ P + + + HWLAI+G+QP++P+N P L++I + + KD +
Sbjct: 124 VIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP--------LQAISDLKRSEYKDDGLA 175
Query: 251 GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLAT 309
+ LS + Q+Y+ ++TE + F +AL SL
Sbjct: 176 ARQV----------------------LSKDLQIYFDKVTEWALTQSGSTLFRQALASLEI 213
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N +++E YLH+L+PSI
Sbjct: 214 DPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSI 271
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
++C+++K+L GR +DNHW LR+F + + K F +N+ RVTR L + DP
Sbjct: 272 ITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTK 330
Query: 430 NFPSLYGAIAG 440
P YGAI G
Sbjct: 331 ALPQHYGAIQG 341
>gi|334183297|ref|NP_175838.3| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194963|gb|AEE33084.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 504
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 181/327 (55%), Gaps = 38/327 (11%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H++R L+ D+D AL+ +N+EP G S+ + FK A
Sbjct: 29 PDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSG---SKSMRFKRAPEN 85
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L+F D+K+V+ ++++ P + + + HWLAI+G+QP++P+N P L+
Sbjct: 86 -RDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP--------LQ 136
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+I + + KD + + LS + Q+Y+ ++TE +
Sbjct: 137 AISDLKRSEYKDDGLAARQV----------------------LSKDLQIYFDKVTEWALT 174
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N
Sbjct: 175 QSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHN 232
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+
Sbjct: 233 PHVHIEPYLHQLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLL 291
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
RVTR L + DP P YGAI G
Sbjct: 292 PRVTRSLLHTFLDPTKALPQHYGAIQG 318
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 25/130 (19%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------PIYGLTVSQFLP 58
ES++VIA+SIG+ L D + L+ ++ Y + ++Q + V L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALH 64
Query: 59 FKH---ASGG----------GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
F++ SG R+L+F D+K+V+ ++++ P + + + HWLAI+G
Sbjct: 65 FRNLEPTSGSKSMRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDG 124
Query: 106 VQPTVPENPP 115
+QP++P+N P
Sbjct: 125 IQPSIPQNSP 134
>gi|169776525|ref|XP_001822729.1| transcription initiation factor TFIID complex subunit [Aspergillus
oryzae RIB40]
gi|83771464|dbj|BAE61596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391873896|gb|EIT82896.1| transcription initiation factor TFIID, subunit TAF6 [Aspergillus
oryzae 3.042]
Length = 445
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 177/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L DI AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDIAQALRVLDVEPLYGYESTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTSADSRNLELMS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G ++ L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNANSTLAAMSGSGNVAVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV ++ +L +MRM +AL+ N+SL
Sbjct: 201 EEYRTSAYSSLREDPGLHQLVPYFVQFISE--KVTHGLKDIFVLTQVMRMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+ ++ +QL G + +ALR+ A+ LL ++K ++ S++ ++ R+
Sbjct: 259 YVDPYVASLVPPILTSLIGRQLGGNADLSEQFALRELAASLLGLIAKKYSHSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 319 ARSCLKTFLDPSKPFGAHYGAIIG 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDIAQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS S V + P+
Sbjct: 127 LAVEGVQPSIPQNPTSADSRNLELMSKGPNANSTLAAMSGSGNVAVKPL 175
>gi|17064762|gb|AAL32535.1| Very similar to TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|28059031|gb|AAO29980.1| Very similar to TATA binding protein-associated factor [Arabidopsis
thaliana]
Length = 466
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 176/314 (56%), Gaps = 38/314 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ KCM H++R L+ D+D AL+ +N+EP G S+ + FK A R+L+F D+K+V+
Sbjct: 4 AIKCMRHARRTTLMAHDVDSALHFRNLEPTSG---SKSMRFKRAPEN-RDLYFFDDKDVE 59
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
++++ P + + + +HWLAI+G+QP++P+N P L++I + + KD
Sbjct: 60 LKNVIEAPLPNAPPDASVFSHWLAIDGIQPSIPQNSP--------LQAISDLKRSEYKDD 111
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQS 306
+ + LS + Q+Y+ ++TE + F +AL S
Sbjct: 112 GLAARQV----------------------LSKDLQIYFDKVTEWALTQSGSTLFRQALAS 149
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N +++E YLH+L+
Sbjct: 150 LEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHNPHVHIEPYLHQLM 207
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PSI++C+++K+L GR +DNHW LR+F + + K F +N+ RVTR L + D
Sbjct: 208 PSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLD 266
Query: 427 PKINFPSLYGAIAG 440
P P YGAI G
Sbjct: 267 PTKALPQHYGAIQG 280
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++P G S+ + FK A R+L+F D+K+V+ ++++ P + + + +HWLAI+
Sbjct: 30 LEPTSG---SKSMRFKRAPEN-RDLYFFDDKDVELKNVIEAPLPNAPPDASVFSHWLAID 85
Query: 105 GVQPTVPENPP 115
G+QP++P+N P
Sbjct: 86 GIQPSIPQNSP 96
>gi|398393594|ref|XP_003850256.1| hypothetical protein MYCGRDRAFT_75105 [Zymoseptoria tritici IPO323]
gi|339470134|gb|EGP85232.1| hypothetical protein MYCGRDRAFT_75105 [Zymoseptoria tritici IPO323]
Length = 449
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 182/325 (56%), Gaps = 24/325 (7%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
+Q LE + K M H+KR L DI AL + +EP+YG ++ L F AS G G+ L
Sbjct: 38 SQVLEE-ALKFMRHAKRTTLTTQDISQALRLLEVEPLYGYESTRPLRFGEASIGPGQPLF 96
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP D+ Q+L +
Sbjct: 97 YVEDEEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTQADQRNQELAA---- 152
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-DEG 298
G T A + NV VK L H LS E QLY++ I A + +E
Sbjct: 153 --------KGQGANTLAAVSGNDNVA---VKPLVKHVLSKELQLYFERICSAILDELNEE 201
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
R AL SL TDPG+H+++P F+A+ + N+ +L +L ++++ ALL+N+SL++
Sbjct: 202 YRTAALASLQTDPGIHQLVPYFIQFVADKITHNL--KSLFILTQSLQLINALLENRSLFI 259
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADN---HWALRDFASRLLTQVSKNFNTSTNNIQTR 415
Y+ ++PS+L+C+V K L G AD H++LRD+AS +L+ +++ + +S++ ++ R
Sbjct: 260 APYVPSIIPSVLTCVVGKHL-GSVSADGTTVHFSLRDYASSILSGIARKYGSSSSTLKPR 318
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
+ R D F + YGA+ G
Sbjct: 319 IARSCLKHFLDSHKPFGTHYGAVLG 343
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 30/146 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
E++ +AES+GI +L D A+ L+ ++ Y +
Sbjct: 7 ENVTDVAESVGIASLNRDVAEHLARDVEYRISQVLEEALKFMRHAKRTTLTTQDISQALR 66
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 LLEVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES 126
LA+EGVQP++P+NP D+ Q+L +
Sbjct: 127 LAVEGVQPSIPQNPTQADQRNQELAA 152
>gi|449298254|gb|EMC94271.1| hypothetical protein BAUCODRAFT_227564 [Baudoinia compniacensis
UAMH 10762]
Length = 452
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 183/324 (56%), Gaps = 25/324 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ K M H+KR L D+ AL + ++EP+YG ++ L F AS G G+ L + +++EV
Sbjct: 44 ALKFMRHAKRTTLTTQDVSQALRLLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEV 103
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ P+ E HWLA+EGVQP++P+NP +SA+ L K
Sbjct: 104 DFEKLINAPLPRVPREMSFTAHWLAVEGVQPSIPQNPLTDPRSAE----------LAAK- 152
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV--GSDEGRRFEAL 304
G ++ L + + V VK L H LS E QLY++ I A + G+DE R A
Sbjct: 153 ----GSGANSTLAAISGNDNVSVKPLVKHVLSKELQLYFERICSAVLDEGNDE-YRSAAF 207
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
SL TD GLH+++P F A+ V N+ ++ +L M+++ ALLDN+SLYL Y+
Sbjct: 208 VSLRTDTGLHQLVPYFVQFAADKVTHNL--KSIFVLSQTMQLLDALLDNKSLYLAPYVPG 265
Query: 365 LLPSILSCIVSKQLCGRPEADN---HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLS 421
++PS+L+C++ K L G P D H+ALRD+A+ LL+++++ + +S++ ++ R+ R
Sbjct: 266 IIPSVLTCLIGKHL-GSPAQDGATTHFALRDYAASLLSKIARQYASSSSTLKPRIARSCL 324
Query: 422 NAINDPKINFPSLYGAIAGEGLVT 445
+ D + + YGAI G ++
Sbjct: 325 KSFLDSHKPYGTHYGAILGLTMIA 348
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 30/137 (21%)
Query: 16 IAESIGIPNLPDDAAKELSDNITYCCKVI-----------------------------IQ 46
+AES+GI +L D + L+ ++ Y + ++
Sbjct: 12 VAESVGIASLNKDVVEHLARDVEYRMSQVLNEALKFMRHAKRTTLTTQDVSQALRLLDVE 71
Query: 47 PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
P+YG ++ L F AS G G+ L + +++EVDFE L+ P+ E HWLA+EG
Sbjct: 72 PLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPRVPREMSFTAHWLAVEG 131
Query: 106 VQPTVPENPPPVDKSAQ 122
VQP++P+NP +SA+
Sbjct: 132 VQPSIPQNPLTDPRSAE 148
>gi|226287176|gb|EEH42689.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
brasiliensis Pb18]
Length = 471
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 182/326 (55%), Gaps = 22/326 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ +AL + +IEP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEQ-ALKFMRHAKRTVLTTQDVSNALRVLDIEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGNDNVSVKPLVKHILSKELQLYFEKVCNAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N+SL
Sbjct: 201 EEYRLSAFSSLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQIMHMTEALIQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEAD--NHWALRDFASRLLTQVSKNFNTSTNNIQT 414
Y++ Y+ L+P +L+C++ +QL G AD H+ALRD ++ L+ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLIGRQL-GSSTADPLEHFALRDLSASLINMIARKYSHSSHTLRP 317
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 318 RLARTFLKNFLDPGKPLGTHYGAIIG 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGTLNDEVVDNLARDVEYRISQVLEQALKFMRHAKRTVLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ I+P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELVS 152
>gi|295666910|ref|XP_002794005.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226277658|gb|EEH33224.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 467
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 182/326 (55%), Gaps = 22/326 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ +AL + +IEP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTVLTTQDVSNALRVLDIEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGNDNVSVKPLVKHILSKELQLYFEKVCNAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N+SL
Sbjct: 201 EEYRLSAFSSLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQIMHMTEALIQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEAD--NHWALRDFASRLLTQVSKNFNTSTNNIQT 414
Y++ Y+ L+P +L+C++ +QL G AD H+ALRD ++ L+ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLIGRQL-GSSTADPLEHFALRDLSASLINMIARKYSHSSHTLRP 317
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 318 RLARTFLKNFLDPGKPLGTHYGAIIG 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGTLNDEVVDNLARDVEYRISQVLEEALKFMRHAKRTVLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ I+P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELVS 152
>gi|50423941|ref|XP_460555.1| DEHA2F04356p [Debaryomyces hansenii CBS767]
gi|49656224|emb|CAG88873.1| DEHA2F04356p [Debaryomyces hansenii CBS767]
Length = 494
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 185/338 (54%), Gaps = 28/338 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--SGGGRELHFTDEKE 185
+ K M HSKR L+ DI+ AL + NIEP+YG SQ L FK A GG+ L++ D E
Sbjct: 54 AIKFMRHSKRKLLMTSDINHALKILNIEPLYGYDNSQPLSFKEALVGAGGQTLYYIDNHE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSAQKLESID 237
++FE L+ P +T HWLAIEGVQP +P+NP PP+ + A +
Sbjct: 114 IEFEKLINQELPSVPRQTTFTAHWLAIEGVQPMIPQNPLPSEIKSLPPIIRGATSSILGN 173
Query: 238 PISKLGKKDKDT-----SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEAC 292
I G ++++ +G AK +KL E V VK L H LS E +LY+ ++ E
Sbjct: 174 DILNSGFSNENSVKDAPNGADAGAKNKKLTEKE-VEVKPLVKHVLSKELKLYFDKVVEVL 232
Query: 293 VGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKA 349
+ +D E ++ A+ SL DPGLH+++P F+AE + + N+ +L ++ ++ A
Sbjct: 233 ISTDPEKESLKYAAINSLKNDPGLHQLVPYFIQFVAEQITNQL--RNIDILSTMLEVISA 290
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQL-------CGRPEADNHWALRDFASRLLTQVS 402
L DN++++L+ Y+H L+P IL+ +++K++ N A+R+FA+ LL +
Sbjct: 291 LADNKTIFLDPYVHALMPCILTLLLAKRIGPIIKDNSSNEVLKNQLAVREFAAILLEHII 350
Query: 403 KNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K + +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 351 KVYGSSYSTLKPRVTRTLLRALLDSSKPIGTHYGALLG 388
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 32/137 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K AES+GI NLP++AAK L+ ++ Y K
Sbjct: 18 DTVKDAAESLGI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKLLMTSDINHALK 76
Query: 43 VI-IQPIYGLTVSQFLPFKHA--SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
++ I+P+YG SQ L FK A GG+ L++ D E++FE L+ P +T H
Sbjct: 77 ILNIEPLYGYDNSQPLSFKEALVGAGGQTLYYIDNHEIEFEKLINQELPSVPRQTTFTAH 136
Query: 100 WLAIEGVQPTVPENPPP 116
WLAIEGVQP +P+NP P
Sbjct: 137 WLAIEGVQPMIPQNPLP 153
>gi|260947084|ref|XP_002617839.1| hypothetical protein CLUG_01298 [Clavispora lusitaniae ATCC 42720]
gi|238847711|gb|EEQ37175.1| hypothetical protein CLUG_01298 [Clavispora lusitaniae ATCC 42720]
Length = 497
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 184/345 (53%), Gaps = 40/345 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG--GRELHFTDEKE 185
+ K M HSKR L DI+ AL + NIEP+YG SQ L FK A G G+ L++ D+ E
Sbjct: 54 AIKFMRHSKRKMLTTGDINHALKVLNIEPLYGYDQSQPLVFKEALFGASGQTLYYIDDNE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSAQK----- 232
V+FE L+ PK +T HWLAIEGVQP +P+NP P + + A
Sbjct: 114 VEFEKLINQELPKVPRQTTFTAHWLAIEGVQPMIPQNPLASEIKNLPAIVRGATSSVLNN 173
Query: 233 --LESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITE 290
L + S + +D G+ A +K V VK L H LS E +LY+ ++ E
Sbjct: 174 DLLNNSSTTSTVAGEDSKEQGQKKKAAGDK-----DVEVKPLVKHVLSKELKLYFDKVVE 228
Query: 291 ACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV 347
+ +D E R AL SL TDPGLH+++P F+AE + + N+ +LI ++ ++
Sbjct: 229 VLISTDAEKESLREAALSSLRTDPGLHQLVPYFIQFVAEQITNQL--RNIDVLITMLDVI 286
Query: 348 KALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN------------HWALRDFAS 395
AL DN++++L Y+H L+P IL+ +++K++ G P +N +A+R+FAS
Sbjct: 287 SALYDNKTIFLAPYVHALMPCILTLLLAKRI-GPPIKENSDDAAITNLLKGQFAVREFAS 345
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL V ++ +S + + RVTR L A+ D + YGA+ G
Sbjct: 346 LLLEHVINSYGSSYSTLTPRVTRTLLRALLDSSKPIGTHYGALLG 390
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 32/135 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +AE +GI NLP+DAAK L+ ++ Y K
Sbjct: 18 DTVKDVAELLGI-NLPEDAAKNLAMDVEYRIHEILETAIKFMRHSKRKMLTTGDINHALK 76
Query: 43 VI-IQPIYGLTVSQFLPFKHASGG--GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
V+ I+P+YG SQ L FK A G G+ L++ D+ EV+FE L+ PK +T H
Sbjct: 77 VLNIEPLYGYDQSQPLVFKEALFGASGQTLYYIDDNEVEFEKLINQELPKVPRQTTFTAH 136
Query: 100 WLAIEGVQPTVPENP 114
WLAIEGVQP +P+NP
Sbjct: 137 WLAIEGVQPMIPQNP 151
>gi|225683556|gb|EEH21840.1| TATA-binding protein-associated-factor [Paracoccidioides
brasiliensis Pb03]
Length = 467
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 182/326 (55%), Gaps = 22/326 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ +AL + +IEP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEQ-ALKFMRHAKRTVLTTQDVSNALRVLDIEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGNDNVSVKPLVKHILSKELQLYFEKVCNAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N+SL
Sbjct: 201 EEYRLSAFSSLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQIMHMTEALIQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEAD--NHWALRDFASRLLTQVSKNFNTSTNNIQT 414
Y++ Y+ L+P +L+C++ +QL G AD H+ALRD ++ L+ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLIGRQL-GSSTADPLEHFALRDLSASLINMIARKYSHSSHTLRP 317
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 318 RLARTFLKNFLDPGKPLGTHYGAIIG 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGTLNDEVVDNLARDVEYRISQVLEQALKFMRHAKRTVLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ I+P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPTSAD--SRNLELVS 152
>gi|190345333|gb|EDK37202.2| hypothetical protein PGUG_01300 [Meyerozyma guilliermondii ATCC
6260]
Length = 489
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 184/340 (54%), Gaps = 33/340 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG--GRELHFTDEKE 185
+ K M HSKR L DI AL + NIEP+YG SQ L FK G G+ L++ D+ E
Sbjct: 54 AIKFMRHSKRKTLTTEDISHALKVFNIEPLYGYDNSQPLNFKETMVGASGQTLYYIDDNE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSA-QKLESI 236
++FE L+ PK + HWLAIEGVQP +P+NP PPV + A +
Sbjct: 114 IEFEKLINQELPKVPRQATFTAHWLAIEGVQPMIPQNPLPSEIKNLPPVLRGATTSILGN 173
Query: 237 DPISKL---GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV 293
D +S G KD + + T A+ + + +K L H LS E +LY+ +++E V
Sbjct: 174 DILSYANGDGAKDAEAANGSTKAQ----KTEKNTEIKPLVKHVLSKELKLYFDKVSEVLV 229
Query: 294 GSDEGR---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
SD + + AL SL +DPGLH+++P F+AE + + N+ +L ++ ++ AL
Sbjct: 230 SSDPEKQELKDAALTSLKSDPGLHQLVPYFIQFVAEQITNQL--RNIDILFTMLEVISAL 287
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD----------NHWALRDFASRLLTQ 400
+N +++LE Y+H L+P IL+ +++K++ P+ N A+R+FA+ LL
Sbjct: 288 AENSTIFLEPYVHALMPCILTLLLAKKISSAPKEQTEEEEKAALKNQLAVREFAAILLEH 347
Query: 401 VSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ K + +S + ++ RVTR L A+ DP + YGA+ G
Sbjct: 348 IVKVYGSSYSTLRPRVTRTLLRALLDPSKPTGTQYGALLG 387
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 32/132 (24%)
Query: 16 IAESIGIPNLPDDAAKELS----------------------------DNITYCCKVI-IQ 46
+AES+GI NLP++AAK L+ ++I++ KV I+
Sbjct: 23 VAESLGI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKTLTTEDISHALKVFNIE 81
Query: 47 PIYGLTVSQFLPFKHASGG--GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
P+YG SQ L FK G G+ L++ D+ E++FE L+ PK + HWLAIE
Sbjct: 82 PLYGYDNSQPLNFKETMVGASGQTLYYIDDNEIEFEKLINQELPKVPRQATFTAHWLAIE 141
Query: 105 GVQPTVPENPPP 116
GVQP +P+NP P
Sbjct: 142 GVQPMIPQNPLP 153
>gi|42495556|gb|AAS17939.1| TATA binding protein associated factor 6b isoform 2 [Arabidopsis
thaliana]
Length = 497
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 179/327 (54%), Gaps = 45/327 (13%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H++R L+ D+D AL+ +N+EP G S+ + FK A
Sbjct: 29 PDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSG---SKSMRFKRAPEN 85
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L+F D+K+V+ ++++ P + + + +HWLAI+G+QP++P+N P L+
Sbjct: 86 -RDLYFFDDKDVELKNVIEAPLPNAPPDASVFSHWLAIDGIQPSIPQNSP--------LQ 136
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+I + + KD + + Q+Y+ ++TE +
Sbjct: 137 AISDLKRSEYKDDGLAAR-----------------------------QIYFDKVTEWALT 167
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N
Sbjct: 168 QSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHN 225
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+
Sbjct: 226 PHVHIEPYLHQLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLL 284
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
RVTR L + DP P YGAI G
Sbjct: 285 PRVTRSLLHTFLDPTKALPQHYGAIQG 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 25/130 (19%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------PIYGLTVSQFLP 58
ES++VIA+SIG+ L D + L+ ++ Y + ++Q + V L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALH 64
Query: 59 FKH---ASGG----------GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
F++ SG R+L+F D+K+V+ ++++ P + + + +HWLAI+G
Sbjct: 65 FRNLEPTSGSKSMRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFSHWLAIDG 124
Query: 106 VQPTVPENPP 115
+QP++P+N P
Sbjct: 125 IQPSIPQNSP 134
>gi|301118558|ref|XP_002907007.1| transcription initiation factor TFIID subunit 6, putative
[Phytophthora infestans T30-4]
gi|262108356|gb|EEY66408.1| transcription initiation factor TFIID subunit 6, putative
[Phytophthora infestans T30-4]
Length = 436
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 180/332 (54%), Gaps = 27/332 (8%)
Query: 109 TVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPF 168
V E P V+ +++ + K HS+R +L P ++ AL +N+E +YG + + +
Sbjct: 25 CVCELLPEVELRVRQVVQDALKFQRHSRRPQLDPTHVNQALQARNLESLYGFSAPGNVKY 84
Query: 169 KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDK 228
K L+F +E+E++ +LL + L+ L HWLA++GVQP +PEN
Sbjct: 85 K-PCEDNETLYFAEEEELELNELLNAPLGQIPLQPVLNVHWLAVDGVQPLIPEN------ 137
Query: 229 SAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEI 288
+D S TS K E V V K H L+ E QLYY ++
Sbjct: 138 ---------------ASVEDDSTCHTSIKDEAF--VSNVDRKPRVKHVLTEEMQLYYTKV 180
Query: 289 TEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVK 348
TEA D + AL SLA DPG+H++LP FI E VK + ++L+LL LMR +
Sbjct: 181 TEAVKSDDFELQRAALTSLAQDPGIHQLLPYFSRFIYEEVKHS--NHDLSLLFSLMRACR 238
Query: 349 ALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTS 408
LL NQSL++E YLH+L+P+IL+C++ QLC P AD+HWALR +A++L+ Q+ + +
Sbjct: 239 CLLVNQSLHVELYLHQLIPAILTCVLGTQLCENP-ADDHWALRKYAAKLVAQICERYGEK 297
Query: 409 TNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
NIQ RV++ AI DP F + YGA+ G
Sbjct: 298 YANIQARVSKTYHKAITDPTCPFSTQYGALHG 329
>gi|334183299|ref|NP_001031187.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194965|gb|AEE33086.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 497
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 178/327 (54%), Gaps = 45/327 (13%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H++R L+ D+D AL+ +N+EP G S+ + FK A
Sbjct: 29 PDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSG---SKSMRFKRAPEN 85
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
R+L+F D+K+V+ ++++ P + + + HWLAI+G+QP++P+N P L+
Sbjct: 86 -RDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP--------LQ 136
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+I + + KD + + Q+Y+ ++TE +
Sbjct: 137 AISDLKRSEYKDDGLAAR-----------------------------QIYFDKVTEWALT 167
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N
Sbjct: 168 QSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHN 225
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+
Sbjct: 226 PHVHIEPYLHQLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLL 284
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
RVTR L + DP P YGAI G
Sbjct: 285 PRVTRSLLHTFLDPTKALPQHYGAIQG 311
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 25/130 (19%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------PIYGLTVSQFLP 58
ES++VIA+SIG+ L D + L+ ++ Y + ++Q + V L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALH 64
Query: 59 FKH---ASGG----------GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
F++ SG R+L+F D+K+V+ ++++ P + + + HWLAI+G
Sbjct: 65 FRNLEPTSGSKSMRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDG 124
Query: 106 VQPTVPENPP 115
+QP++P+N P
Sbjct: 125 IQPSIPQNSP 134
>gi|146419333|ref|XP_001485629.1| hypothetical protein PGUG_01300 [Meyerozyma guilliermondii ATCC
6260]
Length = 489
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 182/339 (53%), Gaps = 31/339 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG--GRELHFTDEKE 185
+ K M HSKR L DI AL + NIEP+YG SQ L FK G G+ L++ D+ E
Sbjct: 54 AIKFMRHSKRKTLTTEDISHALKVFNIEPLYGYDNSQPLNFKETMVGALGQTLYYIDDNE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSAQK--LES 235
++FE L+ PK + HWLAIEGVQP +P+NP PPV + A L +
Sbjct: 114 IEFEKLINQELPKVPRQATFTAHWLAIEGVQPMIPQNPLPSEIKNLPPVLRGATTSILGN 173
Query: 236 IDPISKLGKKDKDTSGKPTSAKLEKL-RNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+ G KD S K +K +N E +K L H LS E +LY+ ++ E V
Sbjct: 174 DILLYANGDGAKDAEAANGSTKAQKTEKNTE---IKPLVKHVLSKELKLYFDKVLEVLVS 230
Query: 295 SDEGR---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALL 351
SD + + AL SL +DPGLH+++P F+AE + + N+ +L ++ ++ AL
Sbjct: 231 SDPEKQELKDAALTSLKSDPGLHQLVPYFIQFVAEQITNQL--RNIDILFTMLEVISALA 288
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD----------NHWALRDFASRLLTQV 401
+N +++LE Y+H L+P IL+ +++K++ P+ N A+R+FA+ LL +
Sbjct: 289 ENSTIFLEPYVHALMPCILTLLLAKKISSAPKEQTEEEEKAALKNQLAVREFAAILLEHI 348
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K + +S + ++ RVTR L A+ DP + YGA+ G
Sbjct: 349 VKVYGSSYSTLRPRVTRTLLRALLDPSKPTGTQYGALLG 387
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 32/132 (24%)
Query: 16 IAESIGIPNLPDDAAKEL----------------------------SDNITYCCKVI-IQ 46
+AES+GI NLP++AAK L +++I++ KV I+
Sbjct: 23 VAESLGI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKTLTTEDISHALKVFNIE 81
Query: 47 PIYGLTVSQFLPFKHASGG--GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
P+YG SQ L FK G G+ L++ D+ E++FE L+ PK + HWLAIE
Sbjct: 82 PLYGYDNSQPLNFKETMVGALGQTLYYIDDNEIEFEKLINQELPKVPRQATFTAHWLAIE 141
Query: 105 GVQPTVPENPPP 116
GVQP +P+NP P
Sbjct: 142 GVQPMIPQNPLP 153
>gi|348665951|gb|EGZ05779.1| hypothetical protein PHYSODRAFT_341977 [Phytophthora sojae]
Length = 436
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 178/326 (54%), Gaps = 27/326 (8%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + K HS+R +L P ++ AL +N+E +YG + + +K
Sbjct: 31 PEVELRVREVVQDALKFQRHSRRPQLDPTHVNQALQARNLESLYGFSAPGTVKYKQCEDN 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
L F +E+E++ +LL + L L HWLA++GVQP +PEN E
Sbjct: 91 D-ALFFAEEEELELGELLNAPLGQIPLHPVLNVHWLAVDGVQPLIPEN-----------E 138
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
S++ D S TS K E V V K H L+ E QLYY ++TEA
Sbjct: 139 SVE----------DDSTCHTSIKDEAF--VNNVDRKPRVKHVLTEEMQLYYTKVTEAVKS 186
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
D + A SLA DPG+H++LP FI E VK + ++L+LL LMR + LL NQ
Sbjct: 187 DDFELQRAAFTSLAQDPGIHQLLPYFSRFIYEEVKHS--NHDLSLLFSLMRACRCLLVNQ 244
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+L++E YLH+L+P+IL+C++ QLC P AD+HWALR +A++L+ Q+ + + NIQ
Sbjct: 245 NLHVELYLHQLIPAILTCVLGTQLCENP-ADDHWALRKYAAKLVAQICERYGEKYANIQA 303
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
RV++ AI DP F + YGA+ G
Sbjct: 304 RVSKTYHKAITDPVCPFSTQYGALHG 329
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 30/139 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E+++V+A+S+G+ +L DD +EL + + ++Q
Sbjct: 7 ETLQVVAQSLGLDDLSDDCVRELLPEVELRVREVVQDALKFQRHSRRPQLDPTHVNQALQ 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
+YG + + +K L F +E+E++ +LL + L L HWL
Sbjct: 67 ARNLESLYGFSAPGTVKYKQCEDND-ALFFAEEEELELGELLNAPLGQIPLHPVLNVHWL 125
Query: 102 AIEGVQPTVPENPPPVDKS 120
A++GVQP +PEN D S
Sbjct: 126 AVDGVQPLIPENESVEDDS 144
>gi|320580678|gb|EFW94900.1| transcription initiation factor TFIID subunit 6 [Ogataea
parapolymorpha DL-1]
Length = 499
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 185/327 (56%), Gaps = 16/327 (4%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ K M H KR L D+D A+ + N+EP+YG VS+ L FK A G G+ L++ D+ +V
Sbjct: 61 ALKFMRHGKRKILTVSDVDRAMKVLNLEPLYGYDVSRPLVFKEAMVGPGQTLYYVDDDDV 120
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSA---QKLESIDPISKLG 243
+FE L+ PK T HWLAIEGVQPT+P+NP P + + S+D I L
Sbjct: 121 EFEKLINQSLPKVPRFTSFTAHWLAIEGVQPTIPQNPNPAEIKQLPPNQRGSVDNILSLN 180
Query: 244 KKDKDTSGKPTSAKLEKLRNVE----TVHVKQLATHELSVEQQLYYKEITEACVG-SDEG 298
D S P++ +N + + VK L H LS E QLY+ + A + ++E
Sbjct: 181 NDDVSLSTNPSNGLTTVEQNSQGRKKDLDVKPLVKHMLSKELQLYFDKSVAALLDETNES 240
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
R AL+SL DPGLH+++P F+AE + N+ N +L ++ ++ +LL N+S++L
Sbjct: 241 LRAAALESLEADPGLHQLVPYFIQFVAETITHNL--KNPTILTTMLMVIYSLLSNKSIFL 298
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADN---HWALRDFASRLLTQVSKNFNTSTNNIQTR 415
+ Y+H ++P IL+ +++K++ R E+++ + +R+ A+ LL ++ + + +S ++ R
Sbjct: 299 DPYIHAIMPCILTLLLAKKIGARSESEDDREQFRIRELAASLLQRIMREYGSSYTTLKPR 358
Query: 416 VTRLLSNAI--NDPKINFPSLYGAIAG 440
+TR L A + K + + +GA+ G
Sbjct: 359 ITRTLLRAFLSSATKSSIGTQFGAMKG 385
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 31/139 (22%)
Query: 11 ESMKVIAESIGIPN-LPDDAAKELSDNITY----------------------------CC 41
++++ AES+G+ + L +D AK L+ ++ Y
Sbjct: 23 DTVRDAAESLGLSSQLTEDVAKNLAMDVEYRIHEILEQALKFMRHGKRKILTVSDVDRAM 82
Query: 42 KVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
KV+ ++P+YG VS+ L FK A G G+ L++ D+ +V+FE L+ PK T H
Sbjct: 83 KVLNLEPLYGYDVSRPLVFKEAMVGPGQTLYYVDDDDVEFEKLINQSLPKVPRFTSFTAH 142
Query: 100 WLAIEGVQPTVPENPPPVD 118
WLAIEGVQPT+P+NP P +
Sbjct: 143 WLAIEGVQPTIPQNPNPAE 161
>gi|448104070|ref|XP_004200193.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
gi|359381615|emb|CCE82074.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
Length = 495
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 41/345 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGGGRELHFTDEKE 185
+ K M HSKR L+ DI+ AL M NIEP+YG +Q L FK GG+ L++ D+KE
Sbjct: 54 AVKFMRHSKRRLLMTSDINHALEMLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISK---- 241
+D E L+ P +T HWLA+EGVQP +P+NP P +++SI P ++
Sbjct: 114 MDLEKLINQPLPTVPRQTTFTAHWLAVEGVQPMIPQNPLP-----SEIKSIPPFARGATS 168
Query: 242 --LGKKDKDTSGKPTSAKL----EKLRNVET------VHVKQLATHELSVEQQLYYKEIT 289
LG D +SG + + ++ RN T VK L H LS E +LY+ ++
Sbjct: 169 STLG-NDITSSGLSSDVTMKDRDDQSRNKNTGLSQNASEVKPLVKHVLSKELKLYFDKVV 227
Query: 290 EACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRM 346
E + +D E ++ AL SL DPGLH+++P F+AE + + N+ +L ++ +
Sbjct: 228 EVLITTDPEKENLKYAALTSLKNDPGLHQLVPYFIQFVAEQITNQL--RNIEILTTMLEV 285
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNH-----------WALRDFAS 395
+ AL DN++L+L+ Y+H L+P IL+ +++K++ G DN+ A+R+FA+
Sbjct: 286 ISALADNKTLFLDPYVHTLMPCILTLLLAKRI-GPASKDNNSSEAEDSLKKQLAVREFAA 344
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL + K + +S + ++ RVTR L A+ D + YG + G
Sbjct: 345 ILLDHIIKVYGSSYSTLKARVTRTLLRALLDYSKPVGTHYGTLLG 389
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 32/137 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K AES+GI LPD+AAK L+ ++ Y I
Sbjct: 18 DTVKDAAESLGIA-LPDEAAKNLAMDVEYRIHEILETAVKFMRHSKRRLLMTSDINHALE 76
Query: 45 ---IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
I+P+YG +Q L FK GG+ L++ D+KE+D E L+ P +T H
Sbjct: 77 MLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKEMDLEKLINQPLPTVPRQTTFTAH 136
Query: 100 WLAIEGVQPTVPENPPP 116
WLA+EGVQP +P+NP P
Sbjct: 137 WLAVEGVQPMIPQNPLP 153
>gi|302506222|ref|XP_003015068.1| hypothetical protein ARB_06828 [Arthroderma benhamiae CBS 112371]
gi|291178639|gb|EFE34428.1| hypothetical protein ARB_06828 [Arthroderma benhamiae CBS 112371]
Length = 443
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 178/324 (54%), Gaps = 23/324 (7%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E + A+EGVQPT+P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREIS----FTAVEGVQPTIPQNPTAADTRHLELVS-- 148
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V+VK L H LS E QLY++ + A + S+
Sbjct: 149 ------------KGPNANANLAAMSGNENVNVKPLVKHILSNELQLYFERVCNAFLDESN 196
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 197 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNI--KDIFVLTQVMHMIEALIRNPTL 254
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 255 YIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLVGMIAKKYSQSSHTLKPRL 314
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 315 ARTFLKTFLDPGQTFGAHYGAIIG 338
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 40/169 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E +
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREIS----F 122
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
A+EGVQPT+P+NP D +L S + MS ++ V + P+
Sbjct: 123 TAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNVKPL 171
>gi|254565253|ref|XP_002489737.1| Subunit (60 kDa) of TFIID and SAGA complexes [Komagataella pastoris
GS115]
gi|238029533|emb|CAY67456.1| Subunit (60 kDa) of TFIID and SAGA complexes [Komagataella pastoris
GS115]
gi|328350154|emb|CCA36554.1| Transcription initiation factor TFIID subunit 6 [Komagataella
pastoris CBS 7435]
Length = 485
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 181/318 (56%), Gaps = 30/318 (9%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA-SGGGRELHFTDEKEVDF 188
K M H KR L DID AL + N+EP+YG VS+ L FK A G G+ L++ D+ EVDF
Sbjct: 60 KFMRHGKRRTLHTSDIDRALKVLNLEPLYGYDVSRPLVFKEALVGAGQNLYYVDDDEVDF 119
Query: 189 EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD-- 246
E L+ PK + HWLAIEGVQP +P+NP P D +++I PI++ ++
Sbjct: 120 EKLINEPLPKVPRFSTFTAHWLAIEGVQPAIPQNPSPND-----IKNILPINRGSMENMF 174
Query: 247 --------KDTSGKPTSAKLEKLRNV----ETVHVKQLATHELSVEQQLYYKEITEACVG 294
+DT+ + TS N+ + + VK L H LS E QLY+ +I E +
Sbjct: 175 SLINDEVKEDTNEEFTSTGPSVSSNISNQKQGLEVKPLVKHVLSRELQLYFDKIVEVLLN 234
Query: 295 SDEGR-----RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKA 349
+E + R ALQS+ DPGLH+++P FI+E + N+ N++LL ++ ++ +
Sbjct: 235 QEETKEAELLRNSALQSVRADPGLHQLVPYFIQFISETITKNL--KNISLLSTMLELIYS 292
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQLCG---RPEADNHWALRDFASRLLTQVSKNFN 406
LL N+SL+LE Y+H ++P IL+ +++K++ + ALR+ ++ LL +V ++F
Sbjct: 293 LLMNESLFLEPYVHAIIPCILTLLLAKKIGNVDDELQKQQQLALRELSASLLERVIEDFG 352
Query: 407 TSTNNIQTRVTRLLSNAI 424
+S + ++ R+TR L A
Sbjct: 353 SSYSTLKPRITRTLLRAF 370
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 30/138 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K AES+GI NL ++AAK L+ +I Y K
Sbjct: 21 DTVKDAAESLGIFNLNEEAAKNLAMDIEYRIHEILDQASKFMRHGKRRTLHTSDIDRALK 80
Query: 43 VI-IQPIYGLTVSQFLPFKHA-SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG VS+ L FK A G G+ L++ D+ EVDFE L+ PK + HW
Sbjct: 81 VLNLEPLYGYDVSRPLVFKEALVGAGQNLYYVDDDEVDFEKLINEPLPKVPRFSTFTAHW 140
Query: 101 LAIEGVQPTVPENPPPVD 118
LAIEGVQP +P+NP P D
Sbjct: 141 LAIEGVQPAIPQNPSPND 158
>gi|302657451|ref|XP_003020447.1| hypothetical protein TRV_05467 [Trichophyton verrucosum HKI 0517]
gi|291184282|gb|EFE39829.1| hypothetical protein TRV_05467 [Trichophyton verrucosum HKI 0517]
Length = 443
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 178/324 (54%), Gaps = 23/324 (7%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E + A+EGVQPT+P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREIS----FTAVEGVQPTIPQNPTAADTRHLELVS-- 148
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V+VK L H LS E QLY++ + A + S+
Sbjct: 149 ------------KGPNANANLAAMSGNENVNVKPLVKHILSNELQLYFERVCNAFLDESN 196
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 197 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNI--KDVFVLTQVMHMIEALIRNPTL 254
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P +L+C++ +QL +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 255 YIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLVGMIAKKYSQSSHTLKPRL 314
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 315 ARTFLKTFLDPGQTFGAHYGAIIG 338
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 40/169 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E +
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREIS----F 122
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
A+EGVQPT+P+NP D +L S + MS ++ V + P+
Sbjct: 123 TAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNVKPL 171
>gi|150864390|ref|XP_001383179.2| hypothetical protein PICST_87852 [Scheffersomyces stipitis CBS
6054]
gi|149385646|gb|ABN65150.2| TATA-binding protein-associated factor [Scheffersomyces stipitis
CBS 6054]
Length = 494
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 186/338 (55%), Gaps = 28/338 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--SGGGRELHFTDEKE 185
+ K M HSKR L+ DI +AL + NIEP+YG SQ L FK A GG+ L++ D+ E
Sbjct: 54 AIKFMRHSKRKLLMTSDISNALKVLNIEPLYGYDNSQPLVFKEALVGAGGQTLYYIDDNE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSAQKLESID 237
++ E L+ PK +T HWLAIEGVQP V +NP PP+ + A +
Sbjct: 114 IELEKLINQELPKVPRQTTFTAHWLAIEGVQPMVAQNPLPAEIKSLPPIIRGATSSILGN 173
Query: 238 PISKLGK--KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS 295
I LG+ ++KD S + ++A +K + VK L H LS E +LY+ ++ E + +
Sbjct: 174 DILSLGQNGENKD-SAQGSAATKDKKATEKQSEVKPLVKHVLSKELKLYFDKVVEVLIST 232
Query: 296 D---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLD 352
D E + AL SL DPGLH+++P F+AE + + N+ +L ++ ++ AL D
Sbjct: 233 DPEKENLKVAALNSLKNDPGLHQLVPYFIQFVAEQITNQL--RNIDILSTMLEVISALAD 290
Query: 353 NQSLYLEKYLHELLPSILSCIVSKQL-------CGRPEAD---NHWALRDFASRLLTQVS 402
N++++L+ Y+H L+P IL+ +++K++ + D A+R+FA+ LL +
Sbjct: 291 NKTIFLDPYVHALMPCILTLLLAKRIGPVIRETSSKESQDTLKTQLAVREFAAFLLEHII 350
Query: 403 KNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K + +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 351 KVYGSSYSTLRPRVTRTLLRALLDSTKPVGTHYGALLG 388
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 32/139 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K AES+ I NLP++AAK L+ ++ Y K
Sbjct: 18 DTVKDAAESLSI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKLLMTSDISNALK 76
Query: 43 VI-IQPIYGLTVSQFLPFKHA--SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
V+ I+P+YG SQ L FK A GG+ L++ D+ E++ E L+ PK +T H
Sbjct: 77 VLNIEPLYGYDNSQPLVFKEALVGAGGQTLYYIDDNEIELEKLINQELPKVPRQTTFTAH 136
Query: 100 WLAIEGVQPTVPENPPPVD 118
WLAIEGVQP V +NP P +
Sbjct: 137 WLAIEGVQPMVAQNPLPAE 155
>gi|154285430|ref|XP_001543510.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407151|gb|EDN02692.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 472
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 181/327 (55%), Gaps = 22/327 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGHDNVTVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 DEYRLSAFSSLKDDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQL---CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
Y++ Y+ L+P +L+C++ +QL G + H+ALRD A+ L++ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAASLISMIARKYSHSSHTLR 318
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 319 PRLARTFLRDFLDPGKPLGTHYGAIIG 345
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPTGAD--SRNLELVS 152
>gi|240277671|gb|EER41179.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus H143]
Length = 470
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 181/327 (55%), Gaps = 22/327 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPAGAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGNDNVTVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 DEYRLSAFSSLKDDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQL---CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
Y++ Y+ L+P +L+C++ +QL G + H+ALRD A+ L++ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAASLISMIARKYSHSSHTLR 318
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 319 PRLARTFLRDFLDPGKPLGTHYGAIIG 345
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPAGAD--SRNLELVS 152
>gi|325093755|gb|EGC47065.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus H88]
Length = 629
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 181/327 (55%), Gaps = 22/327 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPAGAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGNDNVTVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 DEYRLSAFSSLKDDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQL---CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
Y++ Y+ L+P +L+C++ +QL G + H+ALRD A+ L++ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAASLISMIARKYSHSSHTLR 318
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 319 PRLARTFLRDFLDPGKPLGTHYGAIIG 345
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPAGAD--SRNLELVS 152
>gi|225557125|gb|EEH05412.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus G186AR]
Length = 491
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 181/327 (55%), Gaps = 22/327 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D ++ LE +
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPAGAD--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+ G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 152 -----------SKGPNANANLAAMSGNDNVTVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N++L
Sbjct: 201 DEYRLSAFSSLKDDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNKTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQL---CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
Y++ Y+ L+P +L+C++ +QL G + H+ALRD A+ L++ +++ ++ S++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAASLISMIARKYSHSSHTLR 318
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+ R DP + YGAI G
Sbjct: 319 PRLARTFLRDFLDPGKPLGTHYGAIIG 345
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 32/148 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LA+EGVQPT+P+NP D ++ LE +S
Sbjct: 127 LAVEGVQPTIPQNPAGAD--SRNLELVS 152
>gi|448100373|ref|XP_004199334.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
gi|359380756|emb|CCE82997.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
Length = 495
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 183/347 (52%), Gaps = 45/347 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGGGRELHFTDEKE 185
+ K M HSKR L+ DI+ AL M NIEP+YG +Q L FK GG+ L++ D+KE
Sbjct: 54 AVKFMRHSKRRLLMTSDINHALEMLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISK---- 241
+D E L+ P +T HWLA+EGVQP +P+NP P +++SI P ++
Sbjct: 114 MDLEKLINQPLPTVPRQTTFTAHWLAVEGVQPMIPQNPLP-----SEIKSIPPFARGATS 168
Query: 242 --LGK-------------KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYK 286
LG KD+D + ++ L + VK L H LS E +LY+
Sbjct: 169 STLGNDITNSGLSSDVTIKDRDDQSRNKNSSLSQ----NASEVKPLVKHVLSKELKLYFD 224
Query: 287 EITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
++ E + +D E ++ AL SL DPGLH+++P F+AE + + N+ +L +
Sbjct: 225 KVVEVLISTDPEKENLKYAALTSLKNDPGLHQLVPYFIQFVAEQITNQL--RNIEILTTM 282
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD----------NHWALRDF 393
+ ++ AL DN++L+L+ Y+H L+P IL+ ++K++ + D A+R+F
Sbjct: 283 LEVISALADNKTLFLDPYVHTLMPCILTLQLAKRIGPTSKDDESSEAEDSLKKQLAVREF 342
Query: 394 ASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+ LL + K + +S + ++ RVTR L A+ D + YG + G
Sbjct: 343 AAILLDHIIKVYGSSYSTLKARVTRTLLRALLDYSKPVGTHYGTLLG 389
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 32/137 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K AES+G+ LPD+AAK L+ ++ Y I
Sbjct: 18 DTVKDAAESLGV-TLPDEAAKNLAMDVEYRIHEILETAVKFMRHSKRRLLMTSDINHALE 76
Query: 45 ---IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
I+P+YG +Q L FK GG+ L++ D+KE+D E L+ P +T H
Sbjct: 77 MLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKEMDLEKLINQPLPTVPRQTTFTAH 136
Query: 100 WLAIEGVQPTVPENPPP 116
WLA+EGVQP +P+NP P
Sbjct: 137 WLAVEGVQPMIPQNPLP 153
>gi|134026098|gb|AAI35738.1| Unknown (protein for MGC:121670) [Xenopus (Silurana) tropicalis]
Length = 237
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 120/184 (65%), Gaps = 11/184 (5%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL P DID AL +KN+EPIYG +FLPF++ASGGGRELHF +EKEVD
Sbjct: 52 ALKFMHVGKRQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVD 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS--KLGKK 245
D+++ P+ L+ ++ HWL+IEGVQP +PENPPPV K QK E+ +P+ K G++
Sbjct: 112 LSDIISTPLPRVPLDVSIKAHWLSIEGVQPAIPENPPPVTKEQQKSEATEPLKAVKPGQE 171
Query: 246 DKDTSGKPTSAKLEKLRNVET---------VHVKQLATHELSVEQQLYYKEITEACVGSD 296
+ GK A + + E + +K + HELSVEQQLYYKEITEACVGS
Sbjct: 172 EGGLKGKGQGAGAAEGKGKEKKTPILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSC 231
Query: 297 EGRR 300
E +R
Sbjct: 232 EAKR 235
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 29/153 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
I T ESMKVIAES+G+ + ++ + L+ +++ K + Q
Sbjct: 7 IGNTLLPSESMKVIAESVGVSQMSEETCQMLAQEVSFRIKEVTQDALKFMHVGKRQKLTP 66
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
PIYG +FLPF++ASGGGRELHF +EKEVD D+++ P+ L+
Sbjct: 67 NDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLSDIISTPLPRVPLD 126
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
++ HWL+IEGVQP +PENPPPV K QK E+
Sbjct: 127 VSIKAHWLSIEGVQPAIPENPPPVTKEQQKSEA 159
>gi|149242252|ref|XP_001526435.1| hypothetical protein LELG_02993 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450558|gb|EDK44814.1| hypothetical protein LELG_02993 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 529
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 187/359 (52%), Gaps = 40/359 (11%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGG 174
V+ ++ ++ K M HSKR L+ DID AL + N+EP+YG SQ L FK G
Sbjct: 41 VEYRIHEILELAIKFMRHSKRKTLMTTDIDYALKVLNVEPLYGYDNSQPLTFKETMVGAG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPV 226
G+ L++ D+ EV+FE L+ PK +T HWLAIEGVQP VP+NP PP
Sbjct: 101 GQTLYYIDDHEVEFEKLINQELPKIPRKTTFTAHWLAIEGVQPMVPQNPLPSEIKNLPPA 160
Query: 227 DKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKL-------------RNVETVHVKQLA 273
+ A + + LG + G + R+ ET K L
Sbjct: 161 VRGATSTFLGNDVLALGVSNDGKDGGGSGGVGVSKKKAGTATSTSTTERDFET---KPLV 217
Query: 274 THELSVEQQLYYKEITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKV 330
H LS E +LY+ ++ E V SD E + AL SL +DPGLH+++P F+AE +
Sbjct: 218 KHVLSKELKLYFDKVVEVLVSSDPEKESLKNAALTSLKSDPGLHQLVPYFIQFVAEQITN 277
Query: 331 NVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLC-----GRPEAD 385
+ N+ +L ++ ++ AL DN++++L+ Y+H L+P IL+ +++K++ PE +
Sbjct: 278 QL--RNIEILSTMLEVISALADNRTIFLDPYVHALMPCILTLLLAKRIGPVVKDNSPECE 335
Query: 386 N----HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ A+R+FA+ LL V K + +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 336 DTLRSQLAIREFAAILLEHVIKTYGSSYSTLRPRVTRTLLRALLDSTKPVGTHYGALLG 394
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 32/137 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K A+S+GI NLPD++AK L + +I Y K
Sbjct: 16 DTVKDSADSMGI-NLPDESAKNLAMDVEYRIHEILELAIKFMRHSKRKTLMTTDIDYALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
V+ ++P+YG SQ L FK GG+ L++ D+ EV+FE L+ PK +T H
Sbjct: 75 VLNVEPLYGYDNSQPLTFKETMVGAGGQTLYYIDDHEVEFEKLINQELPKIPRKTTFTAH 134
Query: 100 WLAIEGVQPTVPENPPP 116
WLAIEGVQP VP+NP P
Sbjct: 135 WLAIEGVQPMVPQNPLP 151
>gi|407926143|gb|EKG19113.1| TATA box binding protein associated factor (TAF) [Macrophomina
phaseolina MS6]
Length = 448
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 169/326 (51%), Gaps = 21/326 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG-GRE 177
+ Q LE + K M HSKR L DI AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIGQVLEE-ALKFMRHSKRTTLSTQDISQALRVLDVEPLYGYESTRPLRFGEASMGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP + +NP D Q L
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREISFTAHWLALEGVQPAIAQNPTSADSRHQDLLP-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD- 296
G + L + + V VK L H +S E QLY+ I A +D
Sbjct: 153 ------------KGPGANPYLAAVNGYDNVAVKPLVKHVISKELQLYFDRIVSALGDADN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R +AL SL TDPGLH+++P +IAE V N+ +L +L +M M ALL N SL
Sbjct: 201 EEWRAQALGSLRTDPGLHQLVPYFVQYIAEKVTHNM--KDLFILTQMMHMTSALLTNPSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEAD--NHWALRDFASRLLTQVSKNFNTSTNNIQT 414
Y++ Y+ L+ +L+C++ K+L E + H+ LRD A ++ +++K + S+ ++
Sbjct: 259 YMDAYITGLVAPVLTCLMGKRLGSGSEGNPLAHFDLRDLAGTIIIEIAKRYGNSSQTLKK 318
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+ L D K + YGAI G
Sbjct: 319 RLAATLCKNFLDDKKPCGTHYGAILG 344
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +AES+GI +L DD A++L+ ++ + +
Sbjct: 7 DNIKDVAESVGIASLNDDVAEDLARDVEFRIGQVLEEALKFMRHSKRTTLSTQDISQALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHASGG-GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEASMGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LA+EGVQP + +NP D Q L
Sbjct: 127 LALEGVQPAIAQNPTSADSRHQDL 150
>gi|325179833|emb|CCA14236.1| transcription initiation factor TFIID subunit 6 puta [Albugo
laibachii Nc14]
Length = 449
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 179/331 (54%), Gaps = 31/331 (9%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQF----LPFKH 170
P V+ +++ + K +H+KR KL DI+ AL +++EP+YG +P +
Sbjct: 31 PEVEVRVREIIQDAIKFRNHAKRRKLSTRDINQALQARHLEPLYGFQSCSLDHGIIPLQ- 89
Query: 171 ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSA 230
A L+F +++E + ++LL + P +E +R HWLAI GVQP +PEN
Sbjct: 90 ACKEHATLYFYNDQEWNLQELLEAVFPPIPIEPCVRMHWLAIGGVQPQIPEN-------- 141
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITE 290
+ S + A ++ + + + K L H L+ E Q+YY ++TE
Sbjct: 142 --------------ECTHNSKESDFASMQHEDSTQQIDRKPLVKHVLTEEMQVYYSKLTE 187
Query: 291 AC-VGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKA 349
A +D + A S++ DPG+ ++LP + F+ E VK + +L++L+ LMR+ +
Sbjct: 188 AIKQQTDLELQRAAFHSISQDPGMRQLLPYVSRFVYEEVKNS--NRDLSILVSLMRVCRC 245
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTST 409
LL N L +E YLH+LLP++LSC++ QLC A+NHWALRD A++L+ + K + +
Sbjct: 246 LLVNPHLRIELYLHQLLPALLSCVLGHQLCENA-AENHWALRDHAAQLIATICKKYGETY 304
Query: 410 NNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+Q RV++ AI+DP F + YGAI G
Sbjct: 305 EKLQARVSKTYHLAISDPHCPFSTQYGAING 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 34/136 (25%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
E ++VIA+S+G +L D++ +L + + IIQ
Sbjct: 7 EMIQVIAQSLGFDDLSDESIDDLLPEVEVRVREIIQDAIKFRNHAKRRKLSTRDINQALQ 66
Query: 47 -----PIYGLTVSQF----LPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG +P + A L+F +++E + ++LL + P +E +R
Sbjct: 67 ARHLEPLYGFQSCSLDHGIIPLQ-ACKEHATLYFYNDQEWNLQELLEAVFPPIPIEPCVR 125
Query: 98 THWLAIEGVQPTVPEN 113
HWLAI GVQP +PEN
Sbjct: 126 MHWLAIGGVQPQIPEN 141
>gi|449017070|dbj|BAM80472.1| TATA-box binding protein-associated factor 6 [Cyanidioschyzon
merolae strain 10D]
Length = 459
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 170/321 (52%), Gaps = 22/321 (6%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPF-------KHASGGGRELHFTD 182
K M HSKR +L DI AL ++N+EP+YG + ++ PF + + GG ++F
Sbjct: 61 KFMRHSKRRRLKTSDIAAALRLRNLEPLYGFSSNESAPFVGVTLPGESSLGGSNTVYFVG 120
Query: 183 EKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSA-QKLESIDPISK 241
++EVD D+L P+ LET L HWLAIEG+QP +P+NP V +A Q L I +
Sbjct: 121 DEEVDLRDILDGELPRVPLETTLALHWLAIEGIQPRIPQNPADVSSTARQSLTYILRDTV 180
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS----DE 297
+ ++ S P + + V + H +S E QLYY+ EA S DE
Sbjct: 181 HDEPGRNASDTPDT-------DTGMVSFRPKVRHVVSRELQLYYELAIEALTRSAQETDE 233
Query: 298 GRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLY 357
R L S+A DPGL +++P F+ V + +L L M++ +ALL+N+ +
Sbjct: 234 TLRNACLASIARDPGLQQLVPYFVAFLFHHVSNHC--RDLPQLQVSMKLARALLENRYVG 291
Query: 358 LEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVT 417
LE YLH+L+PSI++CIV + LC R ++HW LR+ A+ LL V K + + N+ R+
Sbjct: 292 LEPYLHQLMPSIITCIVGRYLC-RTADEDHWTLRENAASLLADVHKMYGGTYENLLPRIA 350
Query: 418 RLLSNAINDPKINFPSLYGAI 438
L A+ + YGAI
Sbjct: 351 ETLRLALVGEDKALTTQYGAI 371
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 36/148 (24%)
Query: 12 SMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------- 46
++ VIA ++GI L +D A L+ + Y + IIQ
Sbjct: 23 TVHVIAATVGIARLREDVAAYLATDAEYRLREIIQEAGKFMRHSKRRRLKTSDIAAALRL 82
Query: 47 ----PIYGLTVSQFLPF-------KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH 95
P+YG + ++ PF + + GG ++F ++EVD D+L P+ LET
Sbjct: 83 RNLEPLYGFSSNESAPFVGVTLPGESSLGGSNTVYFVGDEEVDLRDILDGELPRVPLETT 142
Query: 96 LRTHWLAIEGVQPTVPENPPPVDKSAQK 123
L HWLAIEG+QP +P+NP V +A++
Sbjct: 143 LALHWLAIEGIQPRIPQNPADVSSTARQ 170
>gi|296412081|ref|XP_002835756.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629546|emb|CAZ79913.1| unnamed protein product [Tuber melanosporum]
Length = 472
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 173/329 (52%), Gaps = 20/329 (6%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRE-LHFTDEKEV 186
+ K M H++R L DI +AL + ++EP+YG ++ L F AS G + + + ++ EV
Sbjct: 44 ALKFMRHARRTTLGTQDISNALRVLDVEPLYGYESTRPLRFGEASLGQLQPIFYVEDDEV 103
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP +P+NP P + A +L P K
Sbjct: 104 DFEKLINAPLPKVPRDVTFTGHWLAIEGVQPAIPQNPTPSE--AARLSETTP-----KGA 156
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV--GSDEGRRFEAL 304
+ ++ L N ETV +K L H LS E QLY++ I+ + + + R AL
Sbjct: 157 SSNTTLSAASTLNPTTN-ETVTIKPLVKHVLSKELQLYFERISTSITDESTTDTIRNAAL 215
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
SL DPGLH++LP FI+E K +L L +M + ALL+N S ++E Y+
Sbjct: 216 ASLRKDPGLHQLLPYFVQFISE--KTTHGLRSLFTLTQMMSLTHALLENDSFFIEPYVSS 273
Query: 365 LLPSILSCIVSKQLCGRPEAD------NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L+P IL+C++ K L G +D H+ALRD ++ LL V K F S++ ++ R+TR
Sbjct: 274 LIPPILTCLIGKHL-GSSSSDPHSQTPAHYALRDLSASLLKLVCKRFGDSSHTLKPRLTR 332
Query: 419 LLSNAINDPKINFPSLYGAIAGEGLVTER 447
DP P+ YG+I G + R
Sbjct: 333 TCLKHFLDPAKPLPTHYGSIIGLAAIGGR 361
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++K ++ES+G+ NL +D AK L+ ++ Y ++Q
Sbjct: 7 DTIKDVSESVGVANLNEDVAKNLAMDVEYRIHQVLQEALKFMRHARRTTLGTQDISNALR 66
Query: 47 -----PIYGLTVSQFLPFKHASGGGRE-LHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
P+YG ++ L F AS G + + + ++ EVDFE L+ PK + HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEASLGQLQPIFYVEDDEVDFEKLINAPLPKVPRDVTFTGHW 126
Query: 101 LAIEGVQPTVPENPPPVDKS 120
LAIEGVQP +P+NP P + +
Sbjct: 127 LAIEGVQPAIPQNPTPSEAA 146
>gi|328873717|gb|EGG22084.1| TATA-binding protein-associated-factor [Dictyostelium fasciculatum]
Length = 462
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 180/337 (53%), Gaps = 34/337 (10%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M HSKR L DI+DAL ++NIE +YG + + F + +++ ++E++
Sbjct: 44 SIKFMKHSKREYLSTDDINDALKLRNIEVLYGYSNCEPHKFSKVQSPTQAIYYIHDRELN 103
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP----------------------- 224
F+D+++ PK E + HWLAIEGVQP +P+NP
Sbjct: 104 FQDIISQPLPKCPREPSIAAHWLAIEGVQPLIPQNPSAAVIAAAHKASSSSSSSSSSTNN 163
Query: 225 PVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLY 284
D+S +K++ D ++ +T+ T +T VK H L+ E Q++
Sbjct: 164 SNDQSTKKMKLDDQSQPQSQQPTNTAESTTFTG-------DTAIVKPQVKHVLAKEMQMF 216
Query: 285 YKEITEACVGSDEGRRFEA-LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
Y+++ + FE ++SL TD L+++LP FI+ V N+ NL LL+ L
Sbjct: 217 YEKVVSSVNDLPNHTLFEGVVESLRTDSSLNQLLPYFTNFISLQVTQNL--TNLELLMRL 274
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
MRM +A+L++ L+ E YLH+++PS+++C++ ++LC + +NHW LRD+ + +L V K
Sbjct: 275 MRMCRAILESTHLHAELYLHQMMPSMMTCLLGRKLC-QSANENHWKLRDYVADILVLVCK 333
Query: 404 NFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ S ++Q R+TR L A++D + P+ YGAI
Sbjct: 334 KYGDSYGSLQGRITRTLLQALHDTSKSLPTHYGAIVA 370
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 29/133 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQP----------------------- 47
E++K+IAE +GI NL D+ + +L+ ++ Y + I+Q
Sbjct: 7 ETIKIIAECVGISNLSDEISNQLASDVEYRIREIVQESIKFMKHSKREYLSTDDINDALK 66
Query: 48 ------IYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
+YG + + F + +++ ++E++F+D+++ PK E + HWL
Sbjct: 67 LRNIEVLYGYSNCEPHKFSKVQSPTQAIYYIHDRELNFQDIISQPLPKCPREPSIAAHWL 126
Query: 102 AIEGVQPTVPENP 114
AIEGVQP +P+NP
Sbjct: 127 AIEGVQPLIPQNP 139
>gi|50548001|ref|XP_501470.1| YALI0C05346p [Yarrowia lipolytica]
gi|49647337|emb|CAG81771.1| YALI0C05346p [Yarrowia lipolytica CLIB122]
Length = 482
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 175/341 (51%), Gaps = 43/341 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYG---LTVSQFLPFKHA-SGGGRELHFTDE 183
+ K M HSKR L D+ +AL N+EP+YG + + + ++ A +G G+ L++ D+
Sbjct: 51 ALKFMRHSKRTTLGTSDVGEALRALNVEPLYGYEGVANEKSVSYREAITGPGQTLYYVDD 110
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG 243
EVDFE L+ PK T L HW+AI+GVQP +P+NP D A ++
Sbjct: 111 DEVDFERLINQPLPKVPRATSLTAHWVAIDGVQPAIPQNPLASDIRAMSVDL-------- 162
Query: 244 KKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE------ 297
+ T+ + + V VK L H LS E QLY+ + A + E
Sbjct: 163 -----RGAQTTNNSIATINGSSDVKVKPLVKHVLSKELQLYFDRVVGALMDGSEVVVTAT 217
Query: 298 --------GRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKA 349
+ AL SL DPG H+++P F+AE V N+ NL +L +++++ A
Sbjct: 218 GDEKEAAVKQHAAALSSLRNDPGFHQLVPYFVQFVAEKVTHNL--KNLPVLYTMLQVIDA 275
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN----------HWALRDFASRLLT 399
LL N +L+++ Y+H L+PS+L+ I++K++ +P ++ +++RDFA+ LL
Sbjct: 276 LLTNPTLFMDPYIHSLMPSVLTLILAKKIGPKPGHEDIVEDSQVTISQYSIRDFAASLLA 335
Query: 400 QVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
++ +N +++ R R L A DP P+LYGA+ G
Sbjct: 336 RICDKYNEIYASLKPRAIRTLLKAFMDPTKPIPTLYGALQG 376
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 33/148 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++K +AE++GI NLPDD AK L+ ++ Y +I+
Sbjct: 14 DTVKDVAETLGISNLPDDVAKTLAMDVEYRIHEVIEQALKFMRHSKRTTLGTSDVGEALR 73
Query: 47 -----PIYG---LTVSQFLPFKHA-SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG + + + ++ A +G G+ L++ D+ EVDFE L+ PK T L
Sbjct: 74 ALNVEPLYGYEGVANEKSVSYREAITGPGQTLYYVDDDEVDFERLINQPLPKVPRATSLT 133
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKLE 125
HW+AI+GVQP +P+NP D A ++
Sbjct: 134 AHWVAIDGVQPAIPQNPLASDIRAMSVD 161
>gi|344234314|gb|EGV66184.1| DUF1546-domain-containing protein [Candida tenuis ATCC 10573]
gi|344234315|gb|EGV66185.1| hypothetical protein CANTEDRAFT_112664 [Candida tenuis ATCC 10573]
Length = 490
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 185/337 (54%), Gaps = 29/337 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--SGGGRELHFTDEKE 185
+ K M SKR L DI+ +L + NIEP+YG SQ L FK A + GG+ L++ D++E
Sbjct: 54 AIKFMRRSKRKLLTTGDINHSLKVLNIEPLYGYDNSQPLQFKEALVAAGGQTLYYIDDQE 113
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPEN---------PPPVDKSAQKLESI 236
++ E L+ PK +T HWLAIEGVQP +P+N PP + + +
Sbjct: 114 IELEKLINQELPKVPRQTTFTAHWLAIEGVQPIIPQNPSPAEIKSLPPAIRGATSSILGN 173
Query: 237 DPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD 296
D ++ G +K+ T +K +K+ + +T VK L H LS E +LY+ ++ + + D
Sbjct: 174 DILNAAGNTEKNIMS--TGSKNKKVTDKDT-EVKPLVKHVLSKELKLYFDKVVDVLLSKD 230
Query: 297 ---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
EG + AL SL DPGLH+++P F+AE + + ++ +L +++++ AL DN
Sbjct: 231 PEKEGLQNSALNSLKNDPGLHQLVPYFIQFVAEQITNQL--RDIDILTTMLQVISALADN 288
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLC----------GRPEADNHWALRDFASRLLTQVSK 403
+S++L+ Y+H L+P IL+ +++K + G+ + A+R+FA+ LL +
Sbjct: 289 RSIFLDPYVHALMPCILTLLLAKNIGPNVKDFNDENGKSALKRNLAVREFAAILLKHIIV 348
Query: 404 NFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 349 VYGSSYSTLKARVTRTLLRALLDSSKPIGTHYGALLG 385
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 32/139 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K AES+GI NL +++AK L+ ++ Y K
Sbjct: 18 DTVKDAAESLGI-NLTEESAKNLAMDVEYRIHEILETAIKFMRRSKRKLLTTGDINHSLK 76
Query: 43 VI-IQPIYGLTVSQFLPFKHA--SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
V+ I+P+YG SQ L FK A + GG+ L++ D++E++ E L+ PK +T H
Sbjct: 77 VLNIEPLYGYDNSQPLQFKEALVAAGGQTLYYIDDQEIELEKLINQELPKVPRQTTFTAH 136
Query: 100 WLAIEGVQPTVPENPPPVD 118
WLAIEGVQP +P+NP P +
Sbjct: 137 WLAIEGVQPIIPQNPSPAE 155
>gi|239612258|gb|EEQ89245.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis ER-3]
Length = 495
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 33/338 (9%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D +I+
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADS-----RNIE 149
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+SK G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 150 LVSK---------GPNANANLAAMSGNDNVSVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N +L
Sbjct: 201 EEYRLSAFSSLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNTTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADN--------------HWALRDFASRLLTQVS 402
Y++ Y+ L+P +L+C++ +QL + H+ LRD A+ L++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLIGRQLGSTTLSTGAGPTPTPTPTDPLEHFVLRDLAASLISMIA 318
Query: 403 KNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ ++ S++ ++ R+ R DP + YGAI G
Sbjct: 319 RKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIG 356
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ + L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALNDEVVENLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS + V + P+
Sbjct: 127 LAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGNDNVSVKPL 175
>gi|242792547|ref|XP_002481976.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces stipitatus ATCC 10500]
gi|218718564|gb|EED17984.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces stipitatus ATCC 10500]
Length = 447
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 178/325 (54%), Gaps = 20/325 (6%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M H +R L DI AL + N+EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHGRRTVLTTQDISHALRVLNVEPLYGYESTRPLRFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ PK E HWLA+EGVQP +P+NP D ++ LE +
Sbjct: 95 LFYVEDEEVDFEKLINAPLPKVPREVTFTAHWLAVEGVQPLIPQNPTSND--SRNLELV- 151
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G T+ L L + VK L H LS E QLY++++ A + +
Sbjct: 152 -----------AKGPNTNPNLAALSGNQNTAVKPLVKHILSKELQLYFEKVCNAFLDQAS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FIAE KV NN+ +L +MRM +A++ NQSL
Sbjct: 201 EEYRTSAYSSLREDPGLHQLVPYFVQFIAE--KVTHSLNNIFVLTQVMRMAEAMIQNQSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCG-RPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR 415
Y++ Y+ L+P +L+C+V +Q G E +ALRD A+ LL ++K ++ +++ ++ R
Sbjct: 259 YIDPYISALVPPVLTCLVGRQFGGSNNELSEQFALRDLAAALLGMIAKKYSHASHTLKPR 318
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
+ R DP F + YGAI G
Sbjct: 319 IARSCLKNFLDPAKPFGTHYGAIMG 343
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGISNLSKDVTENLARDVEYRIAQVLEEALKFMRHGRRTVLTTQDISHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK E HW
Sbjct: 67 VLNVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREVTFTAHW 126
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP +P+NP
Sbjct: 127 LAVEGVQPLIPQNP 140
>gi|241953681|ref|XP_002419562.1| subunit of TFIID and SAGA complexes, putative; transcription
initiation factor TFIID subunit, putative [Candida
dubliniensis CD36]
gi|223642902|emb|CAX43157.1| subunit of TFIID and SAGA complexes, putative [Candida dubliniensis
CD36]
Length = 519
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 190/356 (53%), Gaps = 45/356 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGGGRELHFTDEKE 185
+ K M HSKR +L D+ +AL + NIEP+YG +Q L +K GG+ L++ DE E
Sbjct: 52 AVKFMRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHE 111
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSAQKLESID 237
++FE L+ PK + + HWLAIEGVQP VP+NP P V + A +
Sbjct: 112 IEFEKLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPAVVRGATTSMLGN 171
Query: 238 PISKLGKKDKD-TSGKPTSAKLEKLRN-----------------VETVHVKQLATHELSV 279
I LG K+++ SG T + E L N + + +K L H LS
Sbjct: 172 DILSLGSKNENGESGDTTKHESELLSNGGSANHTNNNNSNKKSTEKDMEIKPLIKHVLSK 231
Query: 280 EQQLYYKEITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
E +LY+ ++ + + +D E + AL SL +DPGLH+++P FIAE + + N
Sbjct: 232 ELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQFIAEQITNQL--RN 289
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQL--CGRPEADN--HW---- 388
+ +L ++ ++ AL+DN++++L+ Y+H L+P IL+ +++K++ + DN W
Sbjct: 290 IEILSTMLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKLTQDNKQEWQDAL 349
Query: 389 ----ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+R+FA+ LL + K + +S + ++ R+TR L A+ D + YGA+ G
Sbjct: 350 KSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVGTQYGALLG 405
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 34 SDNITYCCKVI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKS 90
+ +++ K++ I+P+YG +Q L +K GG+ L++ DE E++FE L+ PK
Sbjct: 66 TSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKV 125
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPP 116
+ + HWLAIEGVQP VP+NP P
Sbjct: 126 PRQVNFTAHWLAIEGVQPMVPQNPLP 151
>gi|327353210|gb|EGE82067.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis ATCC 18188]
Length = 495
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 33/338 (9%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D +I+
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADS-----RNIE 149
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+SK G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 150 LVSK---------GPNANANLAAMSGNDNVSVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N +L
Sbjct: 201 EEYRLSAFSSLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNTTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADN--------------HWALRDFASRLLTQVS 402
Y++ Y+ L+P +L+C++ +QL + H+ LRD A+ L++ ++
Sbjct: 259 YVDPYVPSLIPPVLTCLIGRQLGSTTLSTGAGPTPTPTPTDPLEHFVLRDLAASLISMIA 318
Query: 403 KNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ ++ S++ ++ R+ R DP + YGAI G
Sbjct: 319 RKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIG 356
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ + L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALNDEVVENLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS + V + P+
Sbjct: 127 LAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGNDNVSVKPL 175
>gi|255079732|ref|XP_002503446.1| predicted protein [Micromonas sp. RCC299]
gi|226518713|gb|ACO64704.1| predicted protein [Micromonas sp. RCC299]
Length = 401
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 176/340 (51%), Gaps = 27/340 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQF-LPFKHASG 173
P V+ +++ + K M HSKR +L DI+ +L M+ EP+YG +PF H
Sbjct: 28 PDVEYRLREVIQDACKFMRHSKRTELSTDDINSSLVMRRCEPLYGFPAGAGPIPF-HEVP 86
Query: 174 GGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 233
G EL+ + K +D +D+L P+ + ++ HWLA+EGVQP +PENP P
Sbjct: 87 GHPELYIPENKILDLKDILAAKLPRPPIAVNVVPHWLAVEGVQPLIPENPAPRP------ 140
Query: 234 ESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV 293
+ D+ P + K V+ + HELS E QLY+ IT
Sbjct: 141 ----------ELDRTPGPPPGATGAVKPEEGTGAVVQPVVAHELSKELQLYFDRITAVVR 190
Query: 294 GSDEGRRF------EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV 347
G R AL+SLATD GLH++LP F+ + V ++ N+ L L+ +
Sbjct: 191 GGGGERGAEAPVLRAALESLATDSGLHQLLPYFTQFVQDEVATSL--RNMPRLKALVGTI 248
Query: 348 KALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNT 407
+AL N +++E YLH+L+P++++C+V+K+L P D+HW LR +++ +++ + F
Sbjct: 249 EALCSNPEIHVELYLHQLMPTLITCMVAKRLSADP-TDDHWTLRRYSAEVMSGICARFGK 307
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTER 447
IQ R+TR L A+ DP+ F + +GAIAG + R
Sbjct: 308 DYPTIQPRITRTLLRAMLDPRKPFSTHFGAIAGLAALGPR 347
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 31/135 (22%)
Query: 12 SMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------- 46
S+KVIA+ +GI +L D+ A+ L+ ++ Y + +IQ
Sbjct: 5 SIKVIAQHVGIESLADEVARALAPDVEYRLREVIQDACKFMRHSKRTELSTDDINSSLVM 64
Query: 47 ----PIYGLTVSQF-LPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG +PF H G EL+ + K +D +D+L P+ + ++ HWL
Sbjct: 65 RRCEPLYGFPAGAGPIPF-HEVPGHPELYIPENKILDLKDILAAKLPRPPIAVNVVPHWL 123
Query: 102 AIEGVQPTVPENPPP 116
A+EGVQP +PENP P
Sbjct: 124 AVEGVQPLIPENPAP 138
>gi|42495558|gb|AAS17940.1| TATA binding protein associated factor 6b isoform 3 [Arabidopsis
thaliana]
Length = 476
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 173/317 (54%), Gaps = 39/317 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEK 184
+SI +S L P D+D AL+ +N+EP G S+ + FK A R+L+F D+K
Sbjct: 12 QSIGLSTLSPDVSAALAP-DVDSALHFRNLEPTSG---SKSMRFKRAPEN-RDLYFFDDK 66
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
+V+ ++++ P + + + +HWLAI+G+QP++P+N P L++I + +
Sbjct: 67 DVELKNVIEAPLPNAPPDASVFSHWLAIDGIQPSIPQNSP--------LQAISDLKRSEY 118
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EA 303
KD + + LS + Q+Y+ ++TE + F +A
Sbjct: 119 KDDGLAARQV----------------------LSKDLQIYFDKVTEWALTQSGSTLFRQA 156
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N +++E YLH
Sbjct: 157 LASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHNPHVHIEPYLH 214
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+ RVTR L +
Sbjct: 215 QLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHT 273
Query: 424 INDPKINFPSLYGAIAG 440
DP P YGAI G
Sbjct: 274 FLDPTKALPQHYGAIQG 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGREL 69
ES++VIA+SIG+ L D + L+ ++ ++P G S+ + FK A R+L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVDSALHFRNLEPTSG---SKSMRFKRAPEN-RDL 60
Query: 70 HFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP 115
+F D+K+V+ ++++ P + + + +HWLAI+G+QP++P+N P
Sbjct: 61 YFFDDKDVELKNVIEAPLPNAPPDASVFSHWLAIDGIQPSIPQNSP 106
>gi|261202442|ref|XP_002628435.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis SLH14081]
gi|239590532|gb|EEQ73113.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis SLH14081]
Length = 499
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 178/342 (52%), Gaps = 37/342 (10%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H+KR L D+ AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ P+ E HWLA+EGVQPT+P+NP D +I+
Sbjct: 95 LFYVEDDEVDFEKLINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADS-----RNIE 149
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-D 296
+SK G +A L + + V VK L H LS E QLY++++ A + +
Sbjct: 150 LVSK---------GPNANANLAAMSGNDNVSVKPLVKHILSKELQLYFEKVCTAFLDELN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E KV +L +L +M M +AL+ N +L
Sbjct: 201 EEYRLSAFSSLKEDPGLHQLVPYFVQFISE--KVTHSLKDLFVLTQVMHMTEALIQNTTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADN------------------HWALRDFASRLL 398
Y++ Y+ L+P +L+C++ +QL + H+ LRD A+ L+
Sbjct: 259 YVDPYVPSLIPPVLTCLIGRQLGSTTLSTGAGPTPTPTPTPTPTDPLEHFVLRDLAASLI 318
Query: 399 TQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ +++ ++ S++ ++ R+ R DP + YGAI G
Sbjct: 319 SMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIG 360
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E+++ +AES+GI L D+ + L+ ++ Y +
Sbjct: 7 ENIRDVAESVGIGALNDEVVENLARDVEYRISQVLEEALKFMRHAKRTLLTTQDVSHALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS + V + P+
Sbjct: 127 LAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGNDNVSVKPL 175
>gi|430814588|emb|CCJ28196.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 420
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 25/319 (7%)
Query: 129 FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG----GGRELHFTDEK 184
K M H+KR L DI AL + N+EP+YG F P + G L++ ++
Sbjct: 1 MKFMRHAKRTILTVSDISHALRVLNVEPLYG--YHAFRPVRFGESLLEQGQPPLYYLEDD 58
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
+V+F+ ++ PK + HWLAIEGVQP +P+NP D S + I+
Sbjct: 59 DVEFDKVIHAPLPKVPRDISYSVHWLAIEGVQPAIPQNPSVSDTSVSSKKGFQVINN--- 115
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-RFEA 303
+ T P++ V VK L H +S E +LY++ I A + + R R A
Sbjct: 116 -NSWTLSGPSTG----------VEVKHLVKHVISKELRLYFERINSAILDENNERLRLAA 164
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY-- 361
L SL D GLH++LP + +AE + N+ NL +L +M++ AL DN +L++E Y
Sbjct: 165 LASLRLDSGLHQLLPYFVSLVAEKITHNL--KNLFILNMMMQVTWALFDNPNLFIEPYVS 222
Query: 362 LHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLS 421
LH+++PSIL+C+V+K+L + +H+ALRD ++ LL + + F + ++ R+TR L
Sbjct: 223 LHQIIPSILTCLVAKRLGENAASQDHYALRDLSASLLGLICQRFGDVYHTLKPRITRTLL 282
Query: 422 NAINDPKINFPSLYGAIAG 440
A D K F + YGAI G
Sbjct: 283 KAFLDNKKPFTTHYGAIIG 301
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 36 NITYCCKVI-IQPIYGLTVSQFLPFKHASG----GGRELHFTDEKEVDFEDLLTNLNPKS 90
+I++ +V+ ++P+YG F P + G L++ ++ +V+F+ ++ PK
Sbjct: 16 DISHALRVLNVEPLYG--YHAFRPVRFGESLLEQGQPPLYYLEDDDVEFDKVIHAPLPKV 73
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPPVDKSA 121
+ HWLAIEGVQP +P+NP D S
Sbjct: 74 PRDISYSVHWLAIEGVQPAIPQNPSVSDTSV 104
>gi|354545571|emb|CCE42299.1| hypothetical protein CPAR2_808480 [Candida parapsilosis]
Length = 499
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 184/349 (52%), Gaps = 27/349 (7%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGG 174
V+ ++ ++ K M HSKR L+ DID AL + N+EP+YG SQ + FK G
Sbjct: 41 VEYRIHEILELAIKFMRHSKRKLLMTSDIDYALKILNVEPLYGYDNSQPINFKETMVGAG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPV 226
G+ L++ D++E++FE L+ PK + HWLAIEGVQP VP+NP PP
Sbjct: 101 GQTLYYLDDQEIEFEKLINQELPKVPRRCNFTAHWLAIEGVQPMVPQNPLPSDIKNLPPA 160
Query: 227 DKSAQKLESIDPISKLGKKDKD-TSGKPTSAKLEKLRNV--ETVHVKQLATHELSVEQQL 283
+ A + I LG G+ + K +N + K L H LS E +L
Sbjct: 161 IRGATSSYLGNDILTLGSNSASGVDGQDGTEDGSKNKNPTDKEFDTKPLVKHVLSKELKL 220
Query: 284 YYKEITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALL 340
Y+ ++ E + +D E + AL SL +DPGLH+++P F+AE + + N+ +L
Sbjct: 221 YFDKVVEVLISTDPEKESLKNAALTSLKSDPGLHQLVPYFIQFVAEQITNEL--RNIEIL 278
Query: 341 IYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQ---LCGRPEADNHWALRD----- 392
++ ++ AL DN++++L+ Y+H L+P IL+ +++K+ + + + ALRD
Sbjct: 279 STMLEVISALADNKTIFLDPYVHALMPCILTLLLAKRIGPIINKSAENYQEALRDQLTIR 338
Query: 393 -FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
FA+ LL + K +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 339 EFAAILLEHIIKVHGSSYSTLRPRVTRTLLRALLDSTKPVGTQYGALLG 387
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 32/139 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K A+S+GI NLPD+AAK L + +I Y K
Sbjct: 16 DTVKDSADSLGI-NLPDEAAKNLAMDVEYRIHEILELAIKFMRHSKRKLLMTSDIDYALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
++ ++P+YG SQ + FK GG+ L++ D++E++FE L+ PK + H
Sbjct: 75 ILNVEPLYGYDNSQPINFKETMVGAGGQTLYYLDDQEIEFEKLINQELPKVPRRCNFTAH 134
Query: 100 WLAIEGVQPTVPENPPPVD 118
WLAIEGVQP VP+NP P D
Sbjct: 135 WLAIEGVQPMVPQNPLPSD 153
>gi|68479895|ref|XP_716115.1| hypothetical protein CaO19.7454 [Candida albicans SC5314]
gi|46437770|gb|EAK97111.1| hypothetical protein CaO19.7454 [Candida albicans SC5314]
gi|238881059|gb|EEQ44697.1| hypothetical protein CAWG_02975 [Candida albicans WO-1]
Length = 519
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 184/356 (51%), Gaps = 45/356 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGGGRELHFTDEKE 185
+ K M HSKR +L D+ +AL + NIEP+YG +Q L +K GG+ L++ DE E
Sbjct: 52 AVKFMRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHE 111
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP---------VDKSAQKLESI 236
++FE L+ PK + + HWLAIEGVQP VP+NP P V + +
Sbjct: 112 IEFEKLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPAAVRGATTSMLGN 171
Query: 237 DPISKLGKKDKDTSGKPTSAKLEKLRN-----------------VETVHVKQLATHELSV 279
D +S K + S T + E L N + + +K L H LS
Sbjct: 172 DILSLGSKNENGESNDSTKHESELLSNGGSSSHTNNSNSNKKSTEKDMEIKPLIKHVLSK 231
Query: 280 EQQLYYKEITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
E +LY+ ++ + + +D E + AL SL +DPGLH+++P FIAE + + N
Sbjct: 232 ELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQFIAEQITNQL--RN 289
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCG----RPEADNHW---- 388
+ +L ++ ++ AL+DN++++L+ Y+H L+P IL+ +++K++ E W
Sbjct: 290 IEILSTMLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKLTQENKEEWQDAL 349
Query: 389 ----ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+R+FA+ LL + K + +S + ++ R+TR L A+ D + YGA+ G
Sbjct: 350 KSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVGTQYGALLG 405
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 34 SDNITYCCKVI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKS 90
+ +++ K++ I+P+YG +Q L +K GG+ L++ DE E++FE L+ PK
Sbjct: 66 TSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKV 125
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPP 116
+ + HWLAIEGVQP VP+NP P
Sbjct: 126 PRQVNFTAHWLAIEGVQPMVPQNPLP 151
>gi|448520733|ref|XP_003868350.1| Taf60 TFIID and SAGA complex subunit [Candida orthopsilosis Co
90-125]
gi|380352690|emb|CCG25446.1| Taf60 TFIID and SAGA complex subunit [Candida orthopsilosis]
Length = 496
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 184/363 (50%), Gaps = 55/363 (15%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGG 174
V+ ++ ++ K M HSKR L+ DID AL + N+EP+YG SQ L FK G
Sbjct: 41 VEYRIHEILELAIKFMRHSKRKMLMTSDIDYALKILNVEPLYGYDNSQPLNFKETMVGAG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD------- 227
G+ L++ D++E++FE L+ P+ + HWLAIEGVQP VP+NP P D
Sbjct: 101 GQTLYYVDDQEIEFEKLINQELPQVPRRCNFTAHWLAIEGVQPMVPQNPLPSDIKNLPPA 160
Query: 228 ------------------KSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHV 269
SA ++ D G +D + PT + +
Sbjct: 161 IRGATSSYLGNDILTWGSNSATGVDGQD-----GAEDGAKNKNPTDKEFD---------T 206
Query: 270 KQLATHELSVEQQLYYKEITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAE 326
K L H LS E +LY+ ++ E + +D E + AL SL +DPGLH+++P F+AE
Sbjct: 207 KPLVKHVLSKELKLYFDKVVEVLISTDPEKESLKNAALTSLKSDPGLHQLVPYFIQFVAE 266
Query: 327 GVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLC------- 379
+ + N+ +L ++ ++ AL DN++++L+ Y+H L+P +L+ +++K++
Sbjct: 267 QITNEL--RNIEILSTMLEVISALADNKTIFLDPYVHALMPCVLTLLLAKRIGPIVKDST 324
Query: 380 --GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
+ N A+R+FA+ LL + K +S + ++ RVTR L A+ D + YGA
Sbjct: 325 ENYQETLRNQLAVREFAAILLEHIIKVHGSSYSTLRPRVTRTLLRALLDSTKPVGTQYGA 384
Query: 438 IAG 440
+ G
Sbjct: 385 LLG 387
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 32/139 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKE----------------------------LSDNITYCCK 42
+++K A+S+GI NLPD+AAK ++ +I Y K
Sbjct: 16 DTVKDSADSLGI-NLPDEAAKNIAMDVEYRIHEILELAIKFMRHSKRKMLMTSDIDYALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
++ ++P+YG SQ L FK GG+ L++ D++E++FE L+ P+ + H
Sbjct: 75 ILNVEPLYGYDNSQPLNFKETMVGAGGQTLYYVDDQEIEFEKLINQELPQVPRRCNFTAH 134
Query: 100 WLAIEGVQPTVPENPPPVD 118
WLAIEGVQP VP+NP P D
Sbjct: 135 WLAIEGVQPMVPQNPLPSD 153
>gi|297848008|ref|XP_002891885.1| TATA binding protein associated factor 6b [Arabidopsis lyrata
subsp. lyrata]
gi|297337727|gb|EFH68144.1| TATA binding protein associated factor 6b [Arabidopsis lyrata
subsp. lyrata]
Length = 503
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 177/332 (53%), Gaps = 40/332 (12%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS-----QFLPFK 169
P V+ ++ + KCM H++R L+ D+D AL+ +N+E + + + FK
Sbjct: 29 PDVEYRVLEVMQEAIKCMRHARRTTLMAHDVDSALHFRNLEVSSSSLLLPTSGSKSMRFK 88
Query: 170 HASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKS 229
A R+L+F D+K+V+ ++++ P + + + +HWLAI+G+QP++P+N
Sbjct: 89 RAPEN-RDLYFLDDKDVELKNVIEAPLPNAPPDASIFSHWLAIDGIQPSIPQN------- 140
Query: 230 AQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEIT 289
L++I + + KD + + LS + Q+Y+ ++T
Sbjct: 141 -SHLQAISDLKRSEYKDDGLAARQV----------------------LSKDLQIYFDKVT 177
Query: 290 EACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVK 348
E + F +AL SL TDPGLH ++P +FIAE + N+ +N +L+ LMR+ +
Sbjct: 178 EWALTQSGSTLFRQALSSLETDPGLHPLVPFFTSFIAEEIVRNM--DNYPILLALMRLAR 235
Query: 349 ALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTS 408
+LL N +++E YLH+ +PSI++C+++K L GR +DNHW LR+F + + K +
Sbjct: 236 SLLHNPHVHIEPYLHQFMPSIITCLIAKSL-GRKSSDNHWHLRNFTASTVASTCKRYGHV 294
Query: 409 TNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+N+ RVTR L + DP P YGAI G
Sbjct: 295 YHNLLPRVTRSLLHTFLDPTKALPQHYGAIQG 326
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 33/136 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------PIYGLTVSQFLP 58
ES++VIA+SIG+ +L + + L+ ++ Y ++Q + V L
Sbjct: 5 ESIEVIAQSIGLSSLSPEVSAALAPDVEYRVLEVMQEAIKCMRHARRTTLMAHDVDSALH 64
Query: 59 FKHASGG---------------------GRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
F++ R+L+F D+K+V+ ++++ P + + +
Sbjct: 65 FRNLEVSSSSLLLPTSGSKSMRFKRAPENRDLYFLDDKDVELKNVIEAPLPNAPPDASIF 124
Query: 98 THWLAIEGVQPTVPEN 113
+HWLAI+G+QP++P+N
Sbjct: 125 SHWLAIDGIQPSIPQN 140
>gi|344301463|gb|EGW31775.1| hypothetical protein SPAPADRAFT_62369 [Spathaspora passalidarum
NRRL Y-27907]
Length = 496
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 181/344 (52%), Gaps = 33/344 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGGGRELHFTDEKE 185
+ K M HSKR L+ DI+ AL + N+EP+YG SQ L FK GG+ L++ D++E
Sbjct: 52 AIKIMRHSKRKLLMTTDINHALKILNVEPLYGYDNSQPLSFKETLVGTGGQTLYYIDDQE 111
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSA-QKLESI 236
++FE L+ PK +T HWLAIEGVQP VP+NP PP+ + A +
Sbjct: 112 IEFEKLINQELPKVPRQTTFTAHWLAIEGVQPMVPQNPLPSEIKSLPPIIRGATSSILGN 171
Query: 237 DPISKLGKKDKDTS----GKPTSAKLEKLRNVET---VHVKQLATHELSVEQQLYYKEIT 289
D +S G D GK T + VK L H LS E +LY+ ++
Sbjct: 172 DILSFAGGAGVDGKDAQPGKDKKDSASAAAAAATERELEVKPLVKHVLSKELKLYFDKVV 231
Query: 290 EACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRM 346
E + SD E R AL SL +DPGLH+++P F++ + + N+ +LI ++ +
Sbjct: 232 EVLISSDPEKEPLRQAALSSLRSDPGLHQLVPYFTQFVSAQITDQL--RNIDILITMLEV 289
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQL------CGRPEAD----NHWALRDFASR 396
+ AL++N++++L Y+H L+PSIL+ +++K++ E+ +R FAS
Sbjct: 290 ISALVENKTIFLNPYVHALMPSILTLLLAKRIGPVIKETTTKESQELLMRQLQVRTFASI 349
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL + + + +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 350 LLKHIIEVYGSSYSTLRPRVTRTLLRALLDYSKPMETHYGALLG 393
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 32/137 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K A+S+GI NLPD+AAK L+ ++ Y K
Sbjct: 16 DTVKDAADSLGI-NLPDEAAKNLAMDVEYRIHEILETAIKIMRHSKRKLLMTTDINHALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 99
++ ++P+YG SQ L FK GG+ L++ D++E++FE L+ PK +T H
Sbjct: 75 ILNVEPLYGYDNSQPLSFKETLVGTGGQTLYYIDDQEIEFEKLINQELPKVPRQTTFTAH 134
Query: 100 WLAIEGVQPTVPENPPP 116
WLAIEGVQP VP+NP P
Sbjct: 135 WLAIEGVQPMVPQNPLP 151
>gi|255732956|ref|XP_002551401.1| hypothetical protein CTRG_05699 [Candida tropicalis MYA-3404]
gi|240131142|gb|EER30703.1| hypothetical protein CTRG_05699 [Candida tropicalis MYA-3404]
Length = 507
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 185/351 (52%), Gaps = 40/351 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKH--ASGGGRELHFTDEKE 185
+ K M HSKR +L DI AL + NIEP+YG SQ L +K GG+ L++ D+ E
Sbjct: 52 AVKFMRHSKRRQLTTTDISYALKILNIEPLYGYDNSQPLNYKETMVGAGGQTLYYIDDNE 111
Query: 186 VDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP--------PPVDKSAQKLESID 237
++FE L+ PK + + HWLA+EGVQP VP+NP P V + A +
Sbjct: 112 IEFEKLINQELPKVPRQVNFTAHWLAVEGVQPMVPQNPLPSEIKNLPAVVRGATSTMLGN 171
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNV---------------ETVHVKQLATHELSVEQQ 282
I LG +K+ TS +K + + + +K L H LS E +
Sbjct: 172 DILSLGNNNKNDDSDSTSNGNKKSGSGNGSSTTGNTTTTTTEKDLEIKPLIKHVLSKELK 231
Query: 283 LYYKEITEACVGSD---EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLAL 339
LY+ ++ E + +D E + AL SL DPGLH+++P F+AE + + N+ +
Sbjct: 232 LYFDKVVEVLISTDPEKEHLKNAALTSLKNDPGLHQLVPYFIQFVAEQITNQL--RNIEI 289
Query: 340 LIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQ---LCGRPEAD-------NHWA 389
L ++ ++ AL DN++++L+ Y+H L+P IL+ +++K+ + P+++ + A
Sbjct: 290 LSTMLEVISALADNKTIFLDPYVHALMPCILTLLLAKRIGPIIKNPQSEESKEILKSQLA 349
Query: 390 LRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+R+FA+ LL + K + +S + ++ RVTR L A+ D + YGA+ G
Sbjct: 350 VREFAAILLEHIIKVYGSSYSTLRPRVTRTLLRALLDSTKPIGTHYGALLG 400
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 36 NITYCCKVI-IQPIYGLTVSQFLPFKH--ASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
+I+Y K++ I+P+YG SQ L +K GG+ L++ D+ E++FE L+ PK
Sbjct: 68 DISYALKILNIEPLYGYDNSQPLNYKETMVGAGGQTLYYIDDNEIEFEKLINQELPKVPR 127
Query: 93 ETHLRTHWLAIEGVQPTVPENPPP 116
+ + HWLA+EGVQP VP+NP P
Sbjct: 128 QVNFTAHWLAVEGVQPMVPQNPLP 151
>gi|334183302|ref|NP_001185221.1| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194967|gb|AEE33088.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 476
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 172/317 (54%), Gaps = 39/317 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEK 184
+SI +S L P D++ AL+ +N+EP G S+ + FK A R+L+F D+K
Sbjct: 12 QSIGLSTLSPDVSAALAP-DVESALHFRNLEPTSG---SKSMRFKRAPEN-RDLYFFDDK 66
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
+V+ ++++ P + + + HWLAI+G+QP++P+N P L++I + +
Sbjct: 67 DVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP--------LQAISDLKRSEY 118
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EA 303
KD + + LS + Q+Y+ ++TE + F +A
Sbjct: 119 KDDGLAARQV----------------------LSKDLQIYFDKVTEWALTQSGSTLFRQA 156
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N +++E YLH
Sbjct: 157 LASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHNPHVHIEPYLH 214
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+ RVTR L +
Sbjct: 215 QLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHT 273
Query: 424 INDPKINFPSLYGAIAG 440
DP P YGAI G
Sbjct: 274 FLDPTKALPQHYGAIQG 290
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGREL 69
ES++VIA+SIG+ L D + L+ ++ ++P G S+ + FK A R+L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVESALHFRNLEPTSG---SKSMRFKRAPEN-RDL 60
Query: 70 HFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP 115
+F D+K+V+ ++++ P + + + HWLAI+G+QP++P+N P
Sbjct: 61 YFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP 106
>gi|327301659|ref|XP_003235522.1| transcription initiation factor TFIID complex subunit [Trichophyton
rubrum CBS 118892]
gi|326462874|gb|EGD88327.1| transcription initiation factor TFIID complex 60 kDa subunit
[Trichophyton rubrum CBS 118892]
Length = 431
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 168/324 (51%), Gaps = 35/324 (10%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ +Q LE + K M H KR L D+ +AL + ++EP+YG ++ L F A+ G G+
Sbjct: 36 RISQVLEE-ALKFMRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + ++ EVDFE L+ PK E HWLA+EGVQPT+P+NP D +L S
Sbjct: 95 LFYVEDDEVDFEKLINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTAADTRHLELVS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + E V+VK L H LS E QLY++ + A + S+
Sbjct: 153 ------------KGPNANANLAAMSGNENVNVKPLVKHILSNELQLYFERVCNAFLDESN 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R A SL DPGLH+++P FI+E V N+ ++ +L +M M++AL+ N +L
Sbjct: 201 EEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNI--KDIFVLTQVMHMIEALIRNPTL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y L +A H+ALRD +S L+ ++K ++ S++ ++ R+
Sbjct: 259 YIDPY----------------LGSSNDAVEHFALRDLSSSLVGMIAKKYSQSSHTLKPRL 302
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R DP F + YGAI G
Sbjct: 303 ARTFLKTFLDPGQTFGAHYGAIIG 326
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L DD + LS ++ Y +
Sbjct: 7 DNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQDVSNALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F A+ G G+ L + ++ EVDFE L+ PK E HW
Sbjct: 67 VLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQPT+P+NP D +L S + MS ++ V + P+
Sbjct: 127 LAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNVKPL 175
>gi|452821588|gb|EME28617.1| transcription initiation factor TFIID subunit D5 [Galdieria
sulphuraria]
Length = 459
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 165/316 (52%), Gaps = 37/316 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTV---SQFLPFKHASGGGRELHFTDEK 184
S K M +SKR KLLP DI+ AL ++N+EPI+G + QF K G L+ D+
Sbjct: 47 SVKFMRNSKRTKLLPKDINSALRLENMEPIFGYSAPRRKQFRVVKSCPG----LYVLDDD 102
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
VD + L PK+ E L HWLA+EGVQP + +NP L
Sbjct: 103 LVDLKRALDEPLPKAPFEPALEAHWLAVEGVQPAIWQNP------------------LRD 144
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEAL 304
+ KD S +E L+ ++ H LS E QL Y + D ++ L
Sbjct: 145 QLKDAKTTSESVPVEALKPLK---------HALSKEFQLLYDHVISILRDEDGEKKKACL 195
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
+ LA PG+ +++P +I E V++ N L +M++ +AL+ N ++++E YLH+
Sbjct: 196 RELARQPGIQQLVPYFTLYIHEEVRL--YHNFTERLFSVMQLTRALITNPNIHIEPYLHQ 253
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI 424
++PS+L+CI+ K+LC D HW LRD++S +L + K+F + +QTRVT+ L +A+
Sbjct: 254 VMPSVLTCILGKKLCS-SWMDPHWHLRDYSSSVLGFIYKHFGPNYATLQTRVTKTLISAL 312
Query: 425 NDPKINFPSLYGAIAG 440
D K + YGAI G
Sbjct: 313 LDEKRPLSTRYGAIVG 328
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 45 IQPIYGLTV---SQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
++PI+G + QF K G L+ D+ VD + L PK+ E L HWL
Sbjct: 73 MEPIFGYSAPRRKQFRVVKSCPG----LYVLDDDLVDLKRALDEPLPKAPFEPALEAHWL 128
Query: 102 AIEGVQPTVPENP 114
A+EGVQP + +NP
Sbjct: 129 AVEGVQPAIWQNP 141
>gi|67902490|ref|XP_681501.1| hypothetical protein AN8232.2 [Aspergillus nidulans FGSC A4]
gi|40739698|gb|EAA58888.1| hypothetical protein AN8232.2 [Aspergillus nidulans FGSC A4]
gi|259481015|tpe|CBF74165.1| TPA: transcription initiation factor TFIID complex 60 kDa subunit
(AFU_orthologue; AFUA_5G03680) [Aspergillus nidulans
FGSC A4]
Length = 445
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 176/324 (54%), Gaps = 19/324 (5%)
Query: 119 KSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE 177
+ AQ LE + K M HS+R L DI AL + ++EP+YG ++ L F AS G G+
Sbjct: 36 RIAQVLEE-ALKFMRHSRRTLLTTQDIALALRVLDVEPLYGYETTRPLKFGEASLGPGQP 94
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
L + +++EVDFE L+ P+ E HWLA+EGVQP++P+NP D +L S
Sbjct: 95 LFYVEDEEVDFEKLINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELMS-- 152
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 296
G +A L + V VK L H LS E QLY++++ A + S
Sbjct: 153 ------------KGPNANATLAAMSGNGNVAVKPLVKHVLSKELQLYFEKVCNAFLDESS 200
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
E R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SL
Sbjct: 201 EKYRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDIFVLTQVMHMAEALVQNKSL 258
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
Y++ Y+ L+P IL+C++ +QL G + +ALRD A+ LL ++ ++ S++ ++ R+
Sbjct: 259 YVDPYIASLVPPILTCLIGRQLGGTADLSEQFALRDLAAALLGLIATKYSHSSHTLKPRL 318
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
R + DP F + YGAI G
Sbjct: 319 ARSCLKTLLDPSKPFGAHYGAIIG 342
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 36/169 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI NL +D + L+ ++ Y +
Sbjct: 7 DNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQDIALALR 66
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ P+ E HW
Sbjct: 67 VLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREISFTAHW 126
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLES------ISFKCMSHSKRVKLLPV 143
LA+EGVQP++P+NP D +L S + MS + V + P+
Sbjct: 127 LAVEGVQPSIPQNPTAADSRNLELMSKGPNANATLAAMSGNGNVAVKPL 175
>gi|363749243|ref|XP_003644839.1| hypothetical protein Ecym_2276 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888472|gb|AET38022.1| Hypothetical protein Ecym_2276 [Eremothecium cymbalariae
DBVPG#7215]
Length = 504
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 183/344 (53%), Gaps = 37/344 (10%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASG-GGRELH 179
+++ FK HSKR L DI AL + N+EP+YG T + + F +G GG+ ++
Sbjct: 56 QAVKFK--RHSKRDVLTTDDIARALRVLNVEPLYGYEDNSTRDKEVSFSKVTGQGGQTMY 113
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ D++E+DF+ L+ P THWLA+EGVQP +P+NP D +L P+
Sbjct: 114 YLDDEEIDFDKLINEPLPHVPRLPTFTTHWLAVEGVQPAIPQNPNLNDLRMTQL----PL 169
Query: 240 SK--LGKKDKDTSGKPTSAKLEKLRNV------ETVHVKQLATHELSVEQQLYYKEITEA 291
++ + DTS + TS EK +V +T K L H LS E Q+Y+ ++ A
Sbjct: 170 TRGAIVTALNDTSIQ-TSVSEEKSEHVSQVKPGQTNETKPLVKHVLSKELQIYFNKVVSA 228
Query: 292 CVGSDEG-----RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRM 346
D+ + AL SL +D GLH+++P FIAE + N+ ++L LL ++ M
Sbjct: 229 LTSKDQNLNAQHMKAAALTSLKSDTGLHQLIPYFIQFIAEQITHNL--SDLDLLTTMLEM 286
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEA----------DNHWALRDFASR 396
+ +LL QS++L+ Y+H L+PSIL+ +++K+L G P + + ALRDFAS
Sbjct: 287 IYSLLSKQSVFLDPYIHSLMPSILTLLLAKKLGGAPSSTSSEDEQDFLEKTNALRDFAST 346
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL V + F +++ RVTR L D +F + YG I G
Sbjct: 347 LLDHVLQKFPQVYKSLKPRVTRTLLKTFLDSNRSFGTYYGCIRG 390
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
++++ +AES+GI N+ DD + L +D+I +
Sbjct: 20 DTVRDVAESLGITNVSDDVLRSLAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDIARALR 79
Query: 43 VI-IQPIYGL----TVSQFLPFKHASG-GGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG T + + F +G GG+ +++ D++E+DF+ L+ P
Sbjct: 80 VLNVEPLYGYEDNSTRDKEVSFSKVTGQGGQTMYYLDDEEIDFDKLINEPLPHVPRLPTF 139
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP +P+NP
Sbjct: 140 TTHWLAVEGVQPAIPQNP 157
>gi|374108757|gb|AEY97663.1| FAFL020Wp [Ashbya gossypii FDAG1]
Length = 504
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 185/344 (53%), Gaps = 37/344 (10%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASG-GGRELH 179
+++ FK HSKR L DI AL + N+EP+YG T + + + +G GG+ ++
Sbjct: 56 QAVKFK--RHSKRDVLTTDDIARALRVLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMY 113
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDF+ L+ P THWLA+EGVQP +P+NP + +L P+
Sbjct: 114 YVNDEEVDFDKLINEPLPHVPRLPTFTTHWLAVEGVQPAIPQNPNLNELRMTQL----PL 169
Query: 240 SK--LGKKDKDTSGKPTSAKLEKLRNV------ETVHVKQLATHELSVEQQLYYKEITEA 291
++ + DTS + TS EK +V +T VK L H LS E Q+Y+ ++ A
Sbjct: 170 TRGAIVTALNDTSIQ-TSVSEEKAEHVSQVKPGQTNEVKPLVKHVLSKELQIYFDKVVGA 228
Query: 292 CVGSDEG-----RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRM 346
D+ + AL SL +D GLH+++P FIAE + N+ ++L LL ++ M
Sbjct: 229 LTSKDQTLNAQHMKVAALTSLKSDTGLHQLVPYFIQFIAEQITHNL--SDLDLLTTMLEM 286
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEA----------DNHWALRDFASR 396
+ +LL NQS++L+ Y+H L+PSIL+ +++K+L G P + + ALRDF+S
Sbjct: 287 IYSLLSNQSVFLDPYIHSLMPSILTLLLAKKLGGSPSSTSPEDEQDFLEKTIALRDFSST 346
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL V + F +++ RVTR L D +F + YG I G
Sbjct: 347 LLDHVLQKFPQVYKSLKPRVTRTLLKTFLDSNRSFGTYYGCIRG 390
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
++++ +A+S+GI N+ DD + L +D+I +
Sbjct: 20 DTVRDVADSLGINNVNDDVLRSLAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDIARALR 79
Query: 43 VI-IQPIYGL----TVSQFLPFKHASG-GGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG T + + + +G GG+ +++ +++EVDF+ L+ P
Sbjct: 80 VLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMYYVNDEEVDFDKLINEPLPHVPRLPTF 139
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP +P+NP
Sbjct: 140 TTHWLAVEGVQPAIPQNP 157
>gi|45198499|ref|NP_985528.1| AFL020Wp [Ashbya gossypii ATCC 10895]
gi|44984450|gb|AAS53352.1| AFL020Wp [Ashbya gossypii ATCC 10895]
Length = 504
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 185/344 (53%), Gaps = 37/344 (10%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASG-GGRELH 179
+++ FK HSKR L DI AL + N+EP+YG T + + + +G GG+ ++
Sbjct: 56 QAVKFK--RHSKRDVLTTDDIARALRVLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMY 113
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDF+ L+ P THWLA+EGVQP +P+NP + +L P+
Sbjct: 114 YVNDEEVDFDKLINEPLPHVPRLPTFTTHWLAVEGVQPAIPQNPNLNELRMTQL----PL 169
Query: 240 SK--LGKKDKDTSGKPTSAKLEKLRNV------ETVHVKQLATHELSVEQQLYYKEITEA 291
++ + DTS + TS EK +V +T VK L H LS E Q+Y+ ++ A
Sbjct: 170 TRGAIVTALNDTSIQ-TSVSEEKAEHVSQVKPGQTNEVKPLVKHVLSKELQIYFDKVVGA 228
Query: 292 CVGSDEG-----RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRM 346
D+ + AL SL +D GLH+++P FIAE + N+ ++L LL ++ M
Sbjct: 229 LTSKDQTLNAQHMKVAALTSLKSDTGLHQLVPYFIQFIAEQITHNL--SDLDLLTTMLEM 286
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEA----------DNHWALRDFASR 396
+ +LL NQS++L+ Y+H L+PSIL+ +++K+L G P + + ALRDF+S
Sbjct: 287 IYSLLSNQSVFLDPYIHSLMPSILTLLLAKKLGGSPSSTLPEDEQDFLEKTIALRDFSST 346
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL V + F +++ RVTR L D +F + YG I G
Sbjct: 347 LLDHVLQKFPQVYKSLKPRVTRTLLKTFLDSNRSFGTYYGCIRG 390
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
++++ +A+S+GI N+ DD + L +D+I +
Sbjct: 20 DTVRDVADSLGINNVNDDVLRSLAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDIARALR 79
Query: 43 VI-IQPIYGL----TVSQFLPFKHASG-GGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG T + + + +G GG+ +++ +++EVDF+ L+ P
Sbjct: 80 VLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMYYVNDEEVDFDKLINEPLPHVPRLPTF 139
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP +P+NP
Sbjct: 140 TTHWLAVEGVQPAIPQNP 157
>gi|403160505|ref|XP_003320996.2| hypothetical protein PGTG_02038 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170276|gb|EFP76577.2| hypothetical protein PGTG_02038 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 562
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 168/317 (52%), Gaps = 21/317 (6%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M HSKR LL D+D AL KNIEP++G + L F+ + L+F DE+E+D
Sbjct: 51 SIKFMRHSKRTNLLVEDVDYALRAKNIEPLWGFASTDTLSFRRTTSAVGNLYFIDEEEID 110
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
+LT P E HWLA+EGVQP +P+NP P + L+S S L
Sbjct: 111 LTKVLTAELPPIPQEASYTAHWLAVEGVQPAIPQNPTPAE-----LKSHPAFSGL----- 160
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHE-LSVEQQLYYKEITEACVGSDEGRRFEALQS 306
+S P+S+K + K L T E LS E +LY+ +T A + +D+ R AL S
Sbjct: 161 QSSAIPSSSK-------QAPETKNLTTKEHLSRELRLYFDRVTAAALSNDQSSRNAALAS 213
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLAL--LIYLMRMVKALLDNQSLYLEKYLHE 364
L+ DPGLH+++P + F AE + + +L L ++++++++L N YLE YLH+
Sbjct: 214 LSGDPGLHQLVPYLIQFAAEKITTTLSHTEPSLEHLRDVLQILESILSNPHSYLEPYLHQ 273
Query: 365 LLPSILSCIVSKQLCGRPEADN-HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+LPSIL+C++S P D +R A LL + S ++TR+ + L+ +
Sbjct: 274 ILPSILTCLLSSSFPSSPVTDELEREIRCTAGSLLKSQLNRYQHSYPTLRTRILKTLTKS 333
Query: 424 INDPKINFPSLYGAIAG 440
+ DP+ + GAI G
Sbjct: 334 LIDPQSTDRNQLGAIIG 350
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 29/136 (21%)
Query: 12 SMKVIAESIGIPNLPDDAAKELS----------------------------DNITYCCKV 43
S+K +AES+G+ NL D+AA L+ +++ Y +
Sbjct: 15 SVKDVAESLGLGNLSDEAATALAADVEFRLTQLIEDSIKFMRHSKRTNLLVEDVDYALRA 74
Query: 44 I-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA 102
I+P++G + L F+ + L+F DE+E+D +LT P E HWLA
Sbjct: 75 KNIEPLWGFASTDTLSFRRTTSAVGNLYFIDEEEIDLTKVLTAELPPIPQEASYTAHWLA 134
Query: 103 IEGVQPTVPENPPPVD 118
+EGVQP +P+NP P +
Sbjct: 135 VEGVQPAIPQNPTPAE 150
>gi|145353498|ref|XP_001421048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581284|gb|ABO99341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 189/370 (51%), Gaps = 46/370 (12%)
Query: 97 RTHWLAIEGVQPTVPENPPPVDKSAQK---------LESI---SFKCMSHSKRVKLLPVD 144
R H ++ + T+ PPVD A + L + + KCM SKR L D
Sbjct: 6 RVHVDSVRAIAATI--GAPPVDADAARALASDCEYRLRQVFQDAMKCMRASKRTTLSAED 63
Query: 145 IDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETH 204
++ AL ++N EP+YG + ++ + +++E+D +LLT P+ +E +
Sbjct: 64 VNAALRLRNCEPLYGFGAGTSDYEYKQTREDPDVFYVEDREIDMRELLTRKLPRPPIEVN 123
Query: 205 LRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD------KDTSGKPTSAKL 258
L HWLA+EGVQP +PEN P+ +A+ + +I+P + + K+ G P + L
Sbjct: 124 LVPHWLAVEGVQPMIPEN--PMVPAAEPV-AIEPPRGMKRPRPRAMGAKENGGDPDAGGL 180
Query: 259 EKLRNVETVHVKQLATHELSVEQQLYYKEIT----EACVGSDEGRRFE----ALQSLATD 310
+ +H LS E Q Y+ ++T +A R E AL+SL+ D
Sbjct: 181 -----------LPVVSHTLSRELQFYFDKVTALIRQAGRADASDREVELLSTALRSLSAD 229
Query: 311 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
GLH ++P FI E N+ +L L L++M++AL+ N + +E YLH+L+PS++
Sbjct: 230 VGLHNLMPYFTQFITEETTQNL--RDLPRLRVLIQMIRALISNPDINVELYLHQLMPSVV 287
Query: 371 SCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKIN 430
+C+V+K+LC + D HW+LRD A+ + + F + +I+ R+TR L A+ D K
Sbjct: 288 TCVVAKRLCQNLDED-HWSLRDDAAYTMAFICGKFGDAYPSIRPRITRTLLRALLDTK-P 345
Query: 431 FPSLYGAIAG 440
+ YGAI G
Sbjct: 346 MTTHYGAIRG 355
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 29/134 (21%)
Query: 10 IESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ----------------------- 46
++S++ IA +IG P + DAA+ L+ + Y + + Q
Sbjct: 9 VDSVRAIAATIGAPPVDADAARALASDCEYRLRQVFQDAMKCMRASKRTTLSAEDVNAAL 68
Query: 47 ------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
P+YG + ++ + +++E+D +LLT P+ +E +L HW
Sbjct: 69 RLRNCEPLYGFGAGTSDYEYKQTREDPDVFYVEDREIDMRELLTRKLPRPPIEVNLVPHW 128
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP +PENP
Sbjct: 129 LAVEGVQPMIPENP 142
>gi|4585980|gb|AAD25616.1|AC005287_18 TATA binding protein-associated factor-like protein [Arabidopsis
thaliana]
Length = 491
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 170/327 (51%), Gaps = 51/327 (15%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM H++R L+ D+D AL+ +N+E +
Sbjct: 29 PDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALHFRNLELLRT--------------- 73
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
E++ + ++ +L+ L + L HL +HWLAI+G+QP++P+N P L+
Sbjct: 74 --EIYTSSMTKMSSSRMLSKLLYQMHLLMHLFSHWLAIDGIQPSIPQNSP--------LQ 123
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
+I + + KD + + LS + Q+Y+ ++TE +
Sbjct: 124 AISDLKRSEYKDDGLAARQV----------------------LSKDLQIYFDKVTEWALT 161
Query: 295 SDEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
F +AL SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N
Sbjct: 162 QSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHN 219
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+++E YLH+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+
Sbjct: 220 PHVHIEPYLHQLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLL 278
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
RVTR L + DP P YGAI G
Sbjct: 279 PRVTRSLLHTFLDPTKALPQHYGAIQG 305
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------PIYGLTVSQFLP 58
ES++VIA+SIG+ L D + L+ ++ Y + ++Q + V L
Sbjct: 5 ESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDSALH 64
Query: 59 FKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP 115
F++ E++ + ++ +L+ L + L HL +HWLAI+G+QP++P+N P
Sbjct: 65 FRNLELLRTEIYTSSMTKMSSSRMLSKLLYQMHLLMHLFSHWLAIDGIQPSIPQNSP 121
>gi|378727733|gb|EHY54192.1| transcription initiation factor TFIID subunit D5 [Exophiala
dermatitidis NIH/UT8656]
Length = 451
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 18/315 (5%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ K M HSKR L DI AL + ++EP+YG ++ L + AS G G+ L + +++E+
Sbjct: 44 ALKFMKHSKRTILWTQDIAHALRLLDVEPLYGYETTRPLKYGEASLGPGQPLFYVEDEEM 103
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK E HWLA+EGVQP++P+NP A+ LE +
Sbjct: 104 DFEKLINAPLPKVPREVSFTAHWLAVEGVQPSIPQNP--TSNEARNLELV---------- 151
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-RFEALQ 305
G + L + ++ K H LS E QLY++++ + + + R L
Sbjct: 152 --PKGPNANPALAAMTGADSTTTKPQVKHILSKELQLYFEKVCSSVLDETQPEYRTAGLA 209
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
SL DPGLH+++P F+AE V N+ +L +L +M ++ AL N L L Y+ L
Sbjct: 210 SLRDDPGLHQLVPYFVQFVAEKVTHNL--KDLFVLTQMMLLIDALTRNDKLNLTPYVASL 267
Query: 366 LPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
+P +L+C+ + L + +H+ LRD A+ LL + + ++ ++N++ R+ R L
Sbjct: 268 VPPVLTCLTGRSLGSGIGSLDHYDLRDLAASLLGHLCRKYSKYSHNLKPRLARSLLKTFL 327
Query: 426 DPKINFPSLYGAIAG 440
DPK S YGAI G
Sbjct: 328 DPKKPAGSHYGAILG 342
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 30/139 (21%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------- 46
T + +++K +AES+GI +L + + L +I Y +++Q
Sbjct: 2 TLWGQDTVKDVAESVGILHLNKEVSHALCRDIEYRISLVLQEALKFMKHSKRTILWTQDI 61
Query: 47 ----------PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETH 95
P+YG ++ L + AS G G+ L + +++E+DFE L+ PK E
Sbjct: 62 AHALRLLDVEPLYGYETTRPLKYGEASLGPGQPLFYVEDEEMDFEKLINAPLPKVPREVS 121
Query: 96 LRTHWLAIEGVQPTVPENP 114
HWLA+EGVQP++P+NP
Sbjct: 122 FTAHWLAVEGVQPSIPQNP 140
>gi|367008420|ref|XP_003678710.1| hypothetical protein TDEL_0A01670 [Torulaspora delbrueckii]
gi|359746367|emb|CCE89499.1| hypothetical protein TDEL_0A01670 [Torulaspora delbrueckii]
Length = 506
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 182/354 (51%), Gaps = 49/354 (13%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHA-SGGGRELH 179
+++ FK HSKR L DI AL + N+EP+YG + + + F + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDALTTDDISKALRVLNVEPLYGYHDGSAIDKDVTFSRVNAAGGQTVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ D++EVDF+ L+ P+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 109 YLDDEEVDFDKLINEPLPQVPRLPTFSTHWLAVEGVQPAIIQNPNLNDIRISQPPIVRGA 168
Query: 231 QKLESIDPISKLGKKDKDTSGKPT--------SAKLEKLRNVETVHVKQLATHELSVEQQ 282
++ L TS + L ++ + + VK L H LS E Q
Sbjct: 169 -------IVTALNDNSLQTSSAAAISLSEEKHAQHLSTVKPGQNIEVKPLVKHVLSKELQ 221
Query: 283 LYYKEITEACV---GSDEG---RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
+Y+ ++ A G+DE + AL SL TD GLH+++P FIAE + N+ ++
Sbjct: 222 VYFNKVISALTSKNGNDENGQHMKAAALTSLKTDSGLHQLVPYFIQFIAEQITHNL--SD 279
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN---------- 386
L LL ++ M+ +LL N+S++L+ Y+H L+PSIL+ +++K+L G P +D+
Sbjct: 280 LELLTTILEMIYSLLSNESIFLDPYIHSLMPSILTLLLAKKLGGSPSSDSPEDVSAFLER 339
Query: 387 HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F +++ RVTR L D F + YG + G
Sbjct: 340 TNALRDFAASLLDYVLKKFPQVYKSLKPRVTRTLLKTFLDTNRVFGTYYGCLRG 393
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 43/154 (27%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K + ES+GI ++ DD K L +D+I+ +
Sbjct: 15 DTVKDVTESLGIDSISDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDALTTDDISKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPFKHA-SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG + + + F + GG+ +++ D++EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYHDGSAIDKDVTFSRVNAAGGQTVYYLDDEEVDFDKLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP---------PPVDKSA 121
THWLA+EGVQP + +NP PP+ + A
Sbjct: 135 STHWLAVEGVQPAIIQNPNLNDIRISQPPIVRGA 168
>gi|328768213|gb|EGF78260.1| hypothetical protein BATDEDRAFT_13395 [Batrachochytrium
dendrobatidis JAM81]
Length = 461
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 171/320 (53%), Gaps = 26/320 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M HS+R KL DI+ AL+++N+EP+YG FK S G + L++ +++E D
Sbjct: 43 AVKFMRHSRRQKLTSADINSALSVRNVEPLYGYINGAPSNFKMTSMGSQVLYYLEDQEYD 102
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPV------DKSAQKLESIDPISK 241
+DL+ P LE HWLA++G QP + +NP P + + L++ +
Sbjct: 103 LDDLINRPLPPVPLEATYTAHWLAVDGAQPRIVQNPTPSGIYDYGQTTTETLQATTSTIR 162
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF 301
G+K ++ T L VK++ T EL Q+YY++ITE D R
Sbjct: 163 RGEKSLTSTSDTTQHPL---------LVKEVLTKEL----QMYYEKITEMLTSEDLEIRS 209
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
A++S++ DPG+ ++P FI++ V ++ +L LL +MR + +L N L E Y
Sbjct: 210 LAIESISKDPGVQGIMPYFVQFISDTVTRSL--KDLELLWTIMRFTRGILSNVDLDPEPY 267
Query: 362 LHELLPSILSCIVSKQLC----GRPEAD-NHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
LH+L+PSIL+CIV+K++ G D +HWALR ++++L + F + +Q RV
Sbjct: 268 LHQLIPSILTCIVAKRMTRNSSGETAGDEDHWALRLYSAKLAAHICVQFGGAYPTLQPRV 327
Query: 417 TRLLSNAINDPKINFPSLYG 436
T+ L A+ DP ++YG
Sbjct: 328 TKTLLRAMLDPLKPLATVYG 347
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 30/138 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII---------------------- 45
F E++ IAES+G+ ++ D+ A L + Y + II
Sbjct: 4 FPKETILAIAESVGV-SMQDEVATVLLQDTEYRMREIIHEAVKFMRHSRRQKLTSADINS 62
Query: 46 -------QPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
+P+YG FK S G + L++ +++E D +DL+ P LE
Sbjct: 63 ALSVRNVEPLYGYINGAPSNFKMTSMGSQVLYYLEDQEYDLDDLINRPLPPVPLEATYTA 122
Query: 99 HWLAIEGVQPTVPENPPP 116
HWLA++G QP + +NP P
Sbjct: 123 HWLAVDGAQPRIVQNPTP 140
>gi|119596996|gb|EAW76590.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_c [Homo sapiens]
Length = 165
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 101/124 (81%)
Query: 317 LPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSK 376
LP F V+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+
Sbjct: 18 LPHAQHFSLPQVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 77
Query: 377 QLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYG 436
QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K + + YG
Sbjct: 78 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 137
Query: 437 AIAG 440
+IAG
Sbjct: 138 SIAG 141
>gi|401625786|gb|EJS43778.1| taf6p [Saccharomyces arboricola H-6]
Length = 516
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNRAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDKLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRISQPPFVRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ S DTS S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSLQTPATSSAANASVTDTS---VSQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVGSDEG------RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ ++ + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVISTLTAKNQNDESVQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNSSIFLDPYIHSLMPSILTLLLAKKLGGSPKYDSPQEIHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNRAVSFSKVNTSGGQSVYYLDEEEVDFDKLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|401841666|gb|EJT44019.1| TAF6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 516
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNRAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDKLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
++ S DTS S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSFQTPASSSAANASVADTSA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVVSTLTAKNQTDENAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNSSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQETHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNRAVSFSKVNTSGGQSVYYLDEEEVDFDKLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|396492072|ref|XP_003843707.1| hypothetical protein LEMA_P013580.1 [Leptosphaeria maculans JN3]
gi|312220287|emb|CBY00228.1| hypothetical protein LEMA_P013580.1 [Leptosphaeria maculans JN3]
Length = 649
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 177/344 (51%), Gaps = 48/344 (13%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H KR L +DI +AL + N+EP+YG ++ L F AS G G+ L+
Sbjct: 39 AQVLEE-ALKFMRHGKRTTLNTLDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLY 97
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP S D +
Sbjct: 98 YVEDEEVDFEKLINAPLPKVPREITFTAHWLAVEGVQPSIPQNPTT--------NSADLL 149
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
K G + L ++ V+VK L H LS E Q + +++ A +DE
Sbjct: 150 PK---------GPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFNKLSGAL--TDETN 198
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ AL +++T+PG+H++ + +FIAE V N+ +L +L +MR +ALL+NQ++
Sbjct: 199 IEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNL--KDLFVLHQMMRATEALLNNQAI 256
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEAD----------------------NHWALRDFA 394
YL+ Y+ ++P +L+C L RP +H LRD A
Sbjct: 257 YLDPYVAYMVPPVLTCCTGNNLGPRPRQQPTSAFTENVNGAAANGHVTGLKDHHELRDKA 316
Query: 395 SRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
+ +L + + +++S ++ R+ R DPK +F + YGA+
Sbjct: 317 ASILKHICRKYSSSNQGLKARIARTCLKQFMDPKKSFGAHYGAL 360
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L ++ +EL+ ++ + K
Sbjct: 8 DNVRDVAESVGIASLAENVVEELARDVDFRLAQVLEEALKFMRHGKRTTLNTLDISNALK 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK E HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP++P+NP
Sbjct: 128 LAVEGVQPSIPQNP 141
>gi|410074875|ref|XP_003955020.1| hypothetical protein KAFR_0A04500 [Kazachstania africana CBS 2517]
gi|372461602|emb|CCF55885.1| hypothetical protein KAFR_0A04500 [Kazachstania africana CBS 2517]
Length = 551
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 52/357 (14%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYG----LTVSQFLPF-KHASGGGRELH 179
+++ FK HSK L D+ AL + N+EP+YG L+ + + + K + GG+ ++
Sbjct: 51 QAVKFK--RHSKTEVLTTGDVAKALKVLNVEPLYGYHDNLSFDKNVSYTKVHTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ +E+EVDF+ L+ P+ + THWLAIEGVQP + ENP PP + A
Sbjct: 109 YLNEEEVDFDKLINEPLPQVPRLPNFSTHWLAIEGVQPAIVENPNLLEIRSSIPPTTRGA 168
Query: 231 QKLESIDPISKLGKKDKDT-SGKPTSA----------KLEKLRNVETVHVKQLATHELSV 279
++ L T SG +SA L ++ + VK L H LS
Sbjct: 169 -------IVTALNDNSLQTASGSSSSALTLQEDKISQPLSSVKPGQNTEVKPLVKHVLSK 221
Query: 280 EQQLYYKEITEACVGSD------EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVV 333
E Q+Y+ ++ A D + R AL SL TD GLH+++P FIAE + N+
Sbjct: 222 ELQIYFNKVISALTSKDQEDVNAQHMRTAALTSLRTDNGLHQLVPYFIQFIAEQITHNL- 280
Query: 334 QNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNH------ 387
++L LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P D+
Sbjct: 281 -SDLELLTTILEMIYSLLSNPSIFLDPYIHSLMPSILTLLLAKKLGGAPNTDSKDDLTEF 339
Query: 388 ----WALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F +++ RVTR L D F + YG + G
Sbjct: 340 LEKTNALRDFAASLLDYVLKKFPQVYKSLKPRVTRTLLKTFLDTNRVFGTYYGCLKG 396
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +AES+G+ N+ +D K L+ ++ Y K
Sbjct: 15 DTVKDVAESLGLDNINEDVLKALAMDVEYRILEIVEQAVKFKRHSKTEVLTTGDVAKALK 74
Query: 43 VI-IQPIYG----LTVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG L+ + + + K + GG+ +++ +E+EVDF+ L+ P+ +
Sbjct: 75 VLNVEPLYGYHDNLSFDKNVSYTKVHTSGGQSVYYLNEEEVDFDKLINEPLPQVPRLPNF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLAIEGVQP + ENP
Sbjct: 135 STHWLAIEGVQPAIVENP 152
>gi|156848850|ref|XP_001647306.1| hypothetical protein Kpol_1002p96 [Vanderwaltozyma polyspora DSM
70294]
gi|156117991|gb|EDO19448.1| hypothetical protein Kpol_1002p96 [Vanderwaltozyma polyspora DSM
70294]
Length = 509
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 190/363 (52%), Gaps = 49/363 (13%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L DI AL N+EP+YG +++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDILTTDDISKALRALNVEPLYGYHDGSAINKNISFNKVNASGGQSIY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ +++EVDF+ L+ N P+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 109 YLNDEEVDFDKLINNTLPQVPRLPTFTTHWLAVEGVQPAIAQNPNLNDIRISQPPIVRGA 168
Query: 231 ---------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQ 281
+ S S +DK++S S+ ++ N E VK L H LS E
Sbjct: 169 IVTALNDNSLQASSSSAESISLSEDKNSS---RSSAVKPGHNTE---VKPLLKHVLSKEL 222
Query: 282 QLYYKEITEACVGSD------EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN 335
Q+Y+ ++ A +D + + AL SL TD GLH+++P FIAE + ++ +
Sbjct: 223 QIYFNKVVAALTSTDTSDPNAQYMKAAALSSLKTDSGLHQLVPYFIQFIAEQITHHL--S 280
Query: 336 NLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW------- 388
+L LL ++ M+ +LL N+S++L+ Y+H L+PSIL+ +++K+L G P +D+
Sbjct: 281 DLDLLTTILEMIYSLLSNESIFLDPYIHSLMPSILTLLLAKKLGGSPASDSKEDIQELLE 340
Query: 389 ---ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVT 445
ALRDFA+ LL V K F +++ RVTR L D F + YG + G ++
Sbjct: 341 KANALRDFAASLLDYVLKKFPQFYKSLKPRVTRTLLKTFLDTNRVFGTYYGCLRGISVLE 400
Query: 446 ERS 448
S
Sbjct: 401 SES 403
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 43/154 (27%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++K +AES+GI N+ +D K L+ ++ Y II+
Sbjct: 15 DTVKDVAESLGIDNISEDVLKGLAMDVEYRILEIIEQAVKFKRHSKRDILTTDDISKALR 74
Query: 47 -----PIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
P+YG +++ + F K + GG+ +++ +++EVDF+ L+ N P+
Sbjct: 75 ALNVEPLYGYHDGSAINKNISFNKVNASGGQSIYYLNDEEVDFDKLINNTLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP---------PPVDKSA 121
THWLA+EGVQP + +NP PP+ + A
Sbjct: 135 TTHWLAVEGVQPAIAQNPNLNDIRISQPPIVRGA 168
>gi|349578116|dbj|GAA23282.1| K7_Taf6p, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 478
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 13 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 70
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 71 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 130
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 131 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 187
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 188 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 245
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 246 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 305
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 306 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 34 SDNITYCCKVI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLN 87
+D+++ +V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+
Sbjct: 28 TDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPL 87
Query: 88 PKSALETHLRTHWLAIEGVQPTVPENP 114
P+ THWLA+EGVQP + +NP
Sbjct: 88 PQVPRLPTFTTHWLAVEGVQPAIIQNP 114
>gi|323337577|gb|EGA78822.1| Taf6p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +A S+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAGSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|365760774|gb|EHN02468.1| Taf6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 516
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNRAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDKLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
++ S DT+ S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSFQTPASSSAANASVADTNA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVVSTLTAKNQTDENAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNSSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQETHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 45/191 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNRAVSFSKVNTSGGQSVYYLDEEEVDFDKLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP---------PPVDKSA--QKLESISFKCMSHSKRVKLLPVDI 145
THWLA+EGVQP + +NP PP + A L SF+ + S D
Sbjct: 135 TTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSFQTPASSSAANASVADT 194
Query: 146 DDALNMKNIEP 156
+ + ++ N++P
Sbjct: 195 NASQHLSNVKP 205
>gi|323355096|gb|EGA86926.1| Taf6p [Saccharomyces cerevisiae VL3]
Length = 516
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +A S+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAXSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|151943698|gb|EDN62008.1| TATA-binding protein-associated-factor [Saccharomyces cerevisiae
YJM789]
gi|190407066|gb|EDV10333.1| transcription initiation factor TFIID subunit 6 [Saccharomyces
cerevisiae RM11-1a]
gi|259146397|emb|CAY79654.1| Taf6p [Saccharomyces cerevisiae EC1118]
gi|365765821|gb|EHN07327.1| Taf6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 516
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +A S+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAGSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|323348637|gb|EGA82880.1| Taf6p [Saccharomyces cerevisiae Lalvin QA23]
Length = 498
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 33 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 90
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 91 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 150
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 151 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 207
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 208 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 265
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 266 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 325
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 326 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 378
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 34/131 (25%)
Query: 18 ESIGIPNLPDDAAKEL----------------------------SDNITYCCKVI-IQPI 48
ES+G+ N+ DD K L +D+++ +V+ ++P+
Sbjct: 4 ESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLNVEPL 63
Query: 49 YGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAI 103
YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+ THWLA+
Sbjct: 64 YGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAV 123
Query: 104 EGVQPTVPENP 114
EGVQP + +NP
Sbjct: 124 EGVQPAIIQNP 134
>gi|256273204|gb|EEU08151.1| Taf6p [Saccharomyces cerevisiae JAY291]
Length = 516
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 52/357 (14%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKL--------EKLRNV---ETVHVKQLATHELSV 279
++ L T T+A + L NV + VK L H LS
Sbjct: 169 -------IVTALNDNSLQTPVTSTTASASLTDTGASQHLSNVKPGQNTEVKPLVKHVLSK 221
Query: 280 EQQLYYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVV 333
E Q+Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+
Sbjct: 222 ELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL- 280
Query: 334 QNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW----- 388
++L LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 281 -SDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEF 339
Query: 389 -----ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 340 LERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|6321326|ref|NP_011403.1| Taf6p [Saccharomyces cerevisiae S288c]
gi|1729811|sp|P53040.1|TAF6_YEAST RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TBP-associated factor 6; AltName:
Full=TBP-associated factor 60 kDa; Short=TAFII-60;
Short=TAFII60
gi|840662|gb|AAA83389.1| TAF60 [Saccharomyces cerevisiae]
gi|1310712|emb|CAA66240.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322661|emb|CAA96819.1| TAF60 [Saccharomyces cerevisiae]
gi|51830327|gb|AAU09726.1| YGL112C [Saccharomyces cerevisiae]
gi|285812096|tpg|DAA07996.1| TPA: Taf6p [Saccharomyces cerevisiae S288c]
gi|323305004|gb|EGA58758.1| Taf6p [Saccharomyces cerevisiae FostersB]
gi|392299151|gb|EIW10245.1| Taf6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 516
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 169 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 225
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 226 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 283
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 284 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 343
Query: 389 -ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F + +++ RVTR L D F + YG + G
Sbjct: 344 NALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKG 396
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|50287717|ref|XP_446288.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525595|emb|CAG59212.1| unnamed protein product [Candida glabrata]
Length = 534
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 181/359 (50%), Gaps = 47/359 (13%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT----VSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG ++ L F K + GG+ ++
Sbjct: 66 QAVKFK--RHSKRDTLTTDDVAKALRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVY 123
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE EVDF+ L+ P+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 124 YLDEGEVDFDKLINEPLPQVPRVPTFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGA 183
Query: 231 --QKLESIDPISKLGKKDKDTSGK------PTSAKLEKLRNV----ETVHVKQLATHELS 278
L + +GK L +V + V VK L H LS
Sbjct: 184 IVTALNESSSQLGGSSGSNNGTGKGSVGGESVGGSGSNLASVVQPGQNVDVKPLVKHVLS 243
Query: 279 VEQQLYYKEITEACV-----GSDEGRRFE--ALQSLATDPGLHEMLPRMCTFIAEGVKVN 331
E Q+Y+ +I G +EG+ + AL SL TD GLH+++P FIAE + N
Sbjct: 244 KELQIYFNQIISTLTKHVESGDEEGQHMKGAALMSLKTDTGLHQLVPYFIQFIAEQITHN 303
Query: 332 VVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--- 388
+ ++L LL ++ M+ +LL N S++L+ Y+H L+PS+L+ +++K+L G PE D+
Sbjct: 304 L--SDLELLGTILEMMYSLLSNTSIFLDPYIHSLMPSVLTLLLTKRLGGTPEKDDEASAV 361
Query: 389 -------ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+RDFA+ LL + + F +++ RVTR L D +F + YG + G
Sbjct: 362 EFLEKTNAVRDFAASLLDHILRKFPQVYKSLKPRVTRTLLKTFLDTNRSFGTYYGCLRG 420
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 47/162 (29%)
Query: 7 SFSI----ESMKVIAESIGIPNLPDDAAKEL----------------------------S 34
SF+I ++++ +AES+G+ N+ ++ K L +
Sbjct: 22 SFTIWSPQDTVRDVAESLGLENVNEEVLKALAMDVEYRILEIIEQAVKFKRHSKRDTLTT 81
Query: 35 DNITYCCKVI-IQPIYGLT----VSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNP 88
D++ +V+ ++P+YG ++ L F K + GG+ +++ DE EVDF+ L+ P
Sbjct: 82 DDVAKALRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVYYLDEGEVDFDKLINEPLP 141
Query: 89 KSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 121
+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 142 QVPRVPTFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGA 183
>gi|50287705|ref|XP_446282.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525589|emb|CAG59206.1| unnamed protein product [Candida glabrata]
Length = 536
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 181/359 (50%), Gaps = 47/359 (13%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT----VSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG ++ L F K + GG+ ++
Sbjct: 67 QAVKFK--RHSKRDTLTTDDVAKALRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVY 124
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE EVDF+ L+ P+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 125 YLDEGEVDFDKLINEPLPQVPRVPTFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGA 184
Query: 231 --QKLESIDPISKLGKKDKDTSGK------PTSAKLEKLRNV----ETVHVKQLATHELS 278
L + +GK L +V + V VK L H LS
Sbjct: 185 IVTALNESSSQLGGSSGSNNGTGKGSVGGESVGGSGSNLASVVQPGQNVDVKPLVKHVLS 244
Query: 279 VEQQLYYKEITEACV-----GSDEGRRFE--ALQSLATDPGLHEMLPRMCTFIAEGVKVN 331
E Q+Y+ +I G +EG+ + AL SL TD GLH+++P FIAE + N
Sbjct: 245 KELQIYFNQIISTLTKHVESGDEEGQHMKGAALMSLKTDTGLHQLVPYFIQFIAEQITHN 304
Query: 332 VVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--- 388
+ ++L LL ++ M+ +LL N S++L+ Y+H L+PS+L+ +++K+L G PE D+
Sbjct: 305 L--SDLELLGTILEMMYSLLSNTSIFLDPYIHSLMPSVLTLLLAKRLGGTPEKDDEASAV 362
Query: 389 -------ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+RDFA+ LL + + F +++ RVTR L D +F + YG + G
Sbjct: 363 EFLEKTNAVRDFAASLLDHILRKFPQVYKSLKPRVTRTLLKTFLDTNRSFGTYYGCLRG 421
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 47/162 (29%)
Query: 7 SFSI----ESMKVIAESIGIPNLPDDAAKEL----------------------------S 34
SF+I ++++ +AES+G+ N+ ++ K L +
Sbjct: 23 SFTIWSPQDTVRDVAESLGLENVNEEVLKALAMDVEYRILEIIEQAVKFKRHSKRDTLTT 82
Query: 35 DNITYCCKVI-IQPIYGLT----VSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNP 88
D++ +V+ ++P+YG ++ L F K + GG+ +++ DE EVDF+ L+ P
Sbjct: 83 DDVAKALRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVYYLDEGEVDFDKLINEPLP 142
Query: 89 KSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 121
+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 143 QVPRVPTFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGA 184
>gi|367005434|ref|XP_003687449.1| hypothetical protein TPHA_0J01940 [Tetrapisispora phaffii CBS 4417]
gi|357525753|emb|CCE65015.1| hypothetical protein TPHA_0J01940 [Tetrapisispora phaffii CBS 4417]
Length = 507
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 186/356 (52%), Gaps = 52/356 (14%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASG-GGRELH 179
+++ FK HSKR L DI AL + N+EP+YG ++ + F S GG+ L+
Sbjct: 51 QAVKFK--RHSKRDLLTTDDIAKALRILNVEPLYGYHDGSARNRSITFNRVSAQGGQSLY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPV---- 226
+ D++EVDF+ L+ P+ THWLA+EG+QP + +NP PP+
Sbjct: 109 YVDDEEVDFDKLINEPLPQVPRLPTFTTHWLAVEGIQPAIAQNPNLNDIRVSQPPMVRGA 168
Query: 227 ------DKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVE 280
D S Q S PIS +DKD+ T ++ + +K L H LS E
Sbjct: 169 IVTALNDNSIQSSSSTAPISL--SEDKDSYQAST------VKPGQNTEIKPLVKHVLSKE 220
Query: 281 QQLYYKEITEAC----VGSDEGRRFE--ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ 334
Q+Y+ ++ A + S+E + + AL SL TD GLH+++P FIAE + ++
Sbjct: 221 LQIYFNKVVSALTNPNIESEEAQYMKAAALSSLKTDSGLHQLVPYFIQFIAEQITHHL-- 278
Query: 335 NNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCG-----RPEADNHW- 388
++L LL ++ M+ ALL N+S++L+ Y+H L+PSIL+ +++K++ G E+ + +
Sbjct: 279 SDLDLLSTILEMIYALLSNESIFLDPYIHSLMPSILTLLLAKKIGGSQNEESAESTSEFL 338
Query: 389 ----ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL + K + +++ RVTR L D F + YG + G
Sbjct: 339 EKTNALRDFAASLLDYLLKKYPQIYKSLKPRVTRTLLKTFLDTNRAFGTYYGCLRG 394
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 38/146 (26%)
Query: 7 SFSI----ESMKVIAESIGIPNLPDDAAKEL----------------------------S 34
S+SI +++K +AES+G+ N+ +D K L +
Sbjct: 7 SYSIWSPHDTVKDVAESLGVDNINEDVLKSLAMDVEYRILEIIEQAVKFKRHSKRDLLTT 66
Query: 35 DNITYCCKVI-IQPIYGL----TVSQFLPFKHASG-GGRELHFTDEKEVDFEDLLTNLNP 88
D+I +++ ++P+YG ++ + F S GG+ L++ D++EVDF+ L+ P
Sbjct: 67 DDIAKALRILNVEPLYGYHDGSARNRSITFNRVSAQGGQSLYYVDDEEVDFDKLINEPLP 126
Query: 89 KSALETHLRTHWLAIEGVQPTVPENP 114
+ THWLA+EG+QP + +NP
Sbjct: 127 QVPRLPTFTTHWLAVEGIQPAIAQNP 152
>gi|402582574|gb|EJW76519.1| hypothetical protein WUBG_12569 [Wuchereria bancrofti]
Length = 195
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 124/199 (62%), Gaps = 14/199 (7%)
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLR---------THWLAIEGVQPTVPENPPP 225
GR+L TD+++++ ++ K LET+++ HWL I+GVQP VPENP P
Sbjct: 2 GRDLFVTDDRDIEITPVVNAPAAKLPLETNIKCKYKNNLVLAHWLVIDGVQPAVPENPAP 61
Query: 226 VDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYY 285
V QK ++ + K DT S LR E V +K +TH LSVEQQ+++
Sbjct: 62 V---VQKEAAV--VVATEKAAVDTGLSILSKAHRGLRQTEQVQIKTTSTHALSVEQQVFF 116
Query: 286 KEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMR 345
KEITEA +GSD+ RR EAL SL TD GL ++LPR I EGV+ N+VQ+NLA+LIYLMR
Sbjct: 117 KEITEAIMGSDDTRRTEALYSLQTDAGLQQLLPRFSVVIVEGVRCNIVQHNLAILIYLMR 176
Query: 346 MVKALLDNQSLYLEKYLHE 364
M+++L +N +L LE+ + +
Sbjct: 177 MIQSLANNPALSLERCVSD 195
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 66 GRELHFTDEKEVDFEDLLTNLNPKSALETHLR---------THWLAIEGVQPTVPENPPP 116
GR+L TD+++++ ++ K LET+++ HWL I+GVQP VPENP P
Sbjct: 2 GRDLFVTDDRDIEITPVVNAPAAKLPLETNIKCKYKNNLVLAHWLVIDGVQPAVPENPAP 61
Query: 117 V 117
V
Sbjct: 62 V 62
>gi|328860727|gb|EGG09832.1| hypothetical protein MELLADRAFT_47407 [Melampsora larici-populina
98AG31]
Length = 562
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 23/317 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M H+KR KL+ D+D AL KNIEP++G + L F+ + L+F D++E+D
Sbjct: 51 SIKFMRHAKRTKLMVEDVDYALRAKNIEPLWGFASTDTLSFRRTTSTAGNLYFVDDEEID 110
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD-KSAQKLESIDPISKLGKKD 246
++ P ET HWLA+EGVQP +P+NP + K+ + S+ K+
Sbjct: 111 LTKIVNAQLPPIPRETSYTAHWLAVEGVQPAIPQNPSAAELKNHPAFPAYLSASRSDSKE 170
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
+D H K LS E +LY+ +T A D+ + AL S
Sbjct: 171 EDE------------------HKKMNINQHLSRELRLYFDRVTSAASSEDQRAKNAALAS 212
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNN---LALLIYLMRMVKALLDNQSLYLEKYLH 363
L+ DPGLH+++P + F+AE V + + L+ L + +++++L N LYLE YLH
Sbjct: 213 LSGDPGLHQLVPYLVQFVAEKVTHTLTSTSSPQLSSLRDSIHILESILSNSHLYLEPYLH 272
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
++LPS+L+C++S P + AS L TQVS+ F +++R+ + L+ +
Sbjct: 273 QILPSMLTCLLSSSFSSSPPTLEIEVRKLAASLLSTQVSR-FQPFYPTLRSRILKTLAKS 331
Query: 424 INDPKINFPSLYGAIAG 440
+ PK + GA+ G
Sbjct: 332 LISPKATDGNRLGAVIG 348
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 29/132 (21%)
Query: 12 SMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------- 46
S+K +AES+GI NL D+AA L+ ++ + II+
Sbjct: 15 SVKDVAESLGIGNLSDEAASALAADLEFRLNQIIEESIKFMRHAKRTKLMVEDVDYALRA 74
Query: 47 ----PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA 102
P++G + L F+ + L+F D++E+D ++ P ET HWLA
Sbjct: 75 KNIEPLWGFASTDTLSFRRTTSTAGNLYFVDDEEIDLTKIVNAQLPPIPRETSYTAHWLA 134
Query: 103 IEGVQPTVPENP 114
+EGVQP +P+NP
Sbjct: 135 VEGVQPAIPQNP 146
>gi|254580585|ref|XP_002496278.1| ZYRO0C14718p [Zygosaccharomyces rouxii]
gi|238939169|emb|CAR27345.1| ZYRO0C14718p [Zygosaccharomyces rouxii]
Length = 508
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 183/357 (51%), Gaps = 37/357 (10%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L DI AL + N+EP+YG Q + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDISKALRVLNVEPLYGYHDGSAFEQDVSFTKVQAVGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ +++EVDF+ L+ P+ THWLA+EGVQP + +NP PP+ + A
Sbjct: 109 YLNDEEVDFDKLINEPLPQVPRVPTFTTHWLAVEGVQPAIIQNPNLKDIRLSQPPIVRGA 168
Query: 231 --QKLESIDPISKLGKKDKDTSGKPTSAK-LEKLRNVETVHVKQLATHELSVEQQLYYKE 287
L S + G+ A+ + ++ + + VK L H LS+E Q+Y+ +
Sbjct: 169 IVTALNDNSLQSSTSSAASISLGEEKDAQHMSSVKPNQNIEVKPLVKHVLSMELQIYFNK 228
Query: 288 ITEACVGSDEG------RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
+ A D+ + L SL TD GLH+++P FIAE + N+ ++L LL
Sbjct: 229 VIAALTSKDQDDPNAQHMKAAGLTSLKTDSGLHQLVPYFIQFIAEQITHNL--SDLDLLT 286
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN----------HWALR 391
++ ++ +LL N+S++L+ Y+H L+PSIL+ +++K+L G P++D ALR
Sbjct: 287 TILEIIYSLLSNKSIFLDPYIHSLMPSILTLLLAKKLGGSPDSDRPEDVREFLEKTNALR 346
Query: 392 DFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTERS 448
DFA+ LL V K F +++ RV R L D F + YG + G ++ S
Sbjct: 347 DFAASLLDYVLKKFPQVYKSLKPRVIRTLLKTFLDTNRVFGTYYGCLRGVSVLESES 403
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 43/154 (27%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+GI N+ DD K L +D+I+ +
Sbjct: 15 DTVKDVAESLGIENISDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDISKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG Q + F K + GG+ +++ +++EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYHDGSAFEQDVSFTKVQAVGGQSVYYLNDEEVDFDKLINEPLPQVPRVPTF 134
Query: 97 RTHWLAIEGVQPTVPENP---------PPVDKSA 121
THWLA+EGVQP + +NP PP+ + A
Sbjct: 135 TTHWLAVEGVQPAIIQNPNLKDIRLSQPPIVRGA 168
>gi|449523135|ref|XP_004168580.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 439
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 140/245 (57%), Gaps = 26/245 (10%)
Query: 197 PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSA 256
PK+ L+ + HWLAIEGVQP +PEN P +E I P P+
Sbjct: 7 PKAPLDAAVFCHWLAIEGVQPAIPENAP--------VEVILP--------------PSDT 44
Query: 257 KLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE-ALQSLATDPGLHE 315
K + ++ V +K H LS E QLY+ +ITE V F+ AL SLATD GLH
Sbjct: 45 KSSEQKDEVPVDIKLPVKHILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHP 104
Query: 316 MLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVS 375
++P +IA+ V + + +LL LMR+V +LL N +++E YLH+++PS+++C+V+
Sbjct: 105 LVPYFTCYIADEVARGL--GDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVA 162
Query: 376 KQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLY 435
K+L R +DNHW LRDF ++++ + K F N +QT++T+ L NA DPK + Y
Sbjct: 163 KRLGSR-FSDNHWELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHY 221
Query: 436 GAIAG 440
GAI G
Sbjct: 222 GAIRG 226
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 88 PKSALETHLRTHWLAIEGVQPTVPENPP 115
PK+ L+ + HWLAIEGVQP +PEN P
Sbjct: 7 PKAPLDAAVFCHWLAIEGVQPAIPENAP 34
>gi|195343681|ref|XP_002038424.1| GM10624 [Drosophila sechellia]
gi|194133445|gb|EDW54961.1| GM10624 [Drosophila sechellia]
Length = 588
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR ALQ+L+TDP L ++LPR+ F
Sbjct: 169 VEQVLLKPCKRYPLSMEQQNFFELVTEACVGDLESRRVRALQALSTDPSLEDLLPRLTKF 228
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +N+ Q NL+LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P+
Sbjct: 229 IADAVGINMAQQNLSLLLYLMRMVQALLKNQRFSLLQYLHLLLPAVLSCLLAKQVCASPD 288
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
++HWALR+++ +++QV + F+ + N I R+ + A++ K + +++GA+ G G
Sbjct: 289 LEDHWALREYSGNIISQVVRQFDAAGNGILPRLIGVYKKALS--KKSLTTVFGAVLGLG 345
>gi|242044226|ref|XP_002459984.1| hypothetical protein SORBIDRAFT_02g020250 [Sorghum bicolor]
gi|241923361|gb|EER96505.1| hypothetical protein SORBIDRAFT_02g020250 [Sorghum bicolor]
Length = 446
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 139/245 (56%), Gaps = 24/245 (9%)
Query: 197 PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSA 256
PK+ L+T + HWLAIEGVQP +PENP +ID I + + GK
Sbjct: 13 PKAPLDTSVVAHWLAIEGVQPAIPENP-----------AIDAIVPPTENKRSEHGKDDGL 61
Query: 257 KLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDPGLHE 315
V +K H LS E Q+Y+ +I E + + F EAL SLA D GLH
Sbjct: 62 P---------VDIKLPVKHVLSRELQMYFDKIAELTMSRSDTSLFKEALVSLAKDSGLHP 112
Query: 316 MLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVS 375
++P FIA+ V ++ +L +L LMR+V++LL N +++E YLH+L+PS+++CIV+
Sbjct: 113 LVPYFSYFIADEVTRSL--GDLPVLFALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVA 170
Query: 376 KQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLY 435
K+L G +DNHW LRDF++ L+ V + F +N+Q R+T+ L +A DP + Y
Sbjct: 171 KRL-GHRLSDNHWELRDFSANLVASVCRRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHY 229
Query: 436 GAIAG 440
GA+ G
Sbjct: 230 GAVQG 234
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 88 PKSALETHLRTHWLAIEGVQPTVPENP 114
PK+ L+T + HWLAIEGVQP +PENP
Sbjct: 13 PKAPLDTSVVAHWLAIEGVQPAIPENP 39
>gi|154308898|ref|XP_001553784.1| hypothetical protein BC1G_07977 [Botryotinia fuckeliana B05.10]
gi|347838599|emb|CCD53171.1| similar to transcription initiation factor TFIID complex subunit
[Botryotinia fuckeliana]
Length = 472
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 164/321 (51%), Gaps = 24/321 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M KR L DI AL + ++EP+YG ++ L F AS G G+ L + +++EV
Sbjct: 48 AMRFMHQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEV 107
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLA+EGVQP++P+NP + A L
Sbjct: 108 DFEKLINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAEARANDLVP----------- 156
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG-----RRF 301
G + L L + V VK L H +S E L++ +I EA + D+ R
Sbjct: 157 ---KGPGANPNLGALAGNDNVTVKPLVKHIVSKELILFFDKIREAILDDDDDPEVVTLRE 213
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ TD GL +++P FIAE KV +NL +L ++++ L+ N+ L++E Y
Sbjct: 214 AALKSVETDTGLQQLVPYFVHFIAE--KVTHSLSNLFVLQTMLKLAHVLVSNKKLFVEPY 271
Query: 362 LHELLPSILSCIVSKQL-CGRPEA-DNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
+ L P IL+C+V ++L G PE + LRD A+ L+ +SK + S ++ R+ R
Sbjct: 272 ISSLCPPILTCLVGRKLGTGAPEELKEKYQLRDTAASLIGIISKKYTESNAQLRARLARS 331
Query: 420 LSNAINDPKINFPSLYGAIAG 440
DP + YGAI+G
Sbjct: 332 CLKFFLDPTRSPGEYYGAISG 352
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI L ++A + LS + Y K
Sbjct: 11 DNVRDVAESVGISQLGEEAVRALSQEVEYRVGQVIVEAMRFMHQGKRTVLGTQDISQALK 70
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 130
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LA+EGVQP++P+NP + A L
Sbjct: 131 LAVEGVQPSIPQNPTTAEARANDL 154
>gi|195568452|ref|XP_002102230.1| GD19609 [Drosophila simulans]
gi|194198157|gb|EDX11733.1| GD19609 [Drosophila simulans]
Length = 570
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR AL++L+TDP L ++LPR+ F
Sbjct: 151 VEQVLLKPCKRYPLSMEQQNFFELVTEACVGDLESRRVRALKALSTDPSLEDLLPRLTKF 210
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +N+ Q NL+LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P+
Sbjct: 211 IADAVAINMAQQNLSLLLYLMRMVQALLKNQRFSLLQYLHLLLPAVLSCLLAKQVCASPD 270
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
++HWALR+++ +++Q+ + F+ + N I R+ + A++ K + +++GA+ G G
Sbjct: 271 LEDHWALREYSGNIISQIVRQFDAAGNGILPRLIGVYKKALS--KKSLTTVFGAVLGLG 327
>gi|308810433|ref|XP_003082525.1| putative TAF6 (ISS) [Ostreococcus tauri]
gi|116060994|emb|CAL56382.1| putative TAF6 (ISS), partial [Ostreococcus tauri]
Length = 563
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 37/302 (12%)
Query: 148 ALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 207
AL ++N EP+YG G + + DE+E+D +L+T P+ ++ +L
Sbjct: 99 ALKLRNCEPLYGFGT-----------GTSSVFYLDEREIDVRELITKRLPRPPVDVNLVP 147
Query: 208 HWLAIEGVQPTVPENPPPVDKSAQKLESIDPI-SKLGKKDKDTSGKPTSAKLEKLRNVET 266
HWLA+EGVQP +PENP P+ + L+ P+ SK + + G P + L+
Sbjct: 148 HWLAVEGVQPMIPENPMPLAPEPKPLQP--PLGSKRPRARAEGGGDPDAGGLQP------ 199
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFE--------ALQSLATDPGLHEMLP 318
+ +H L+ E Q Y+ ++T G+ + AL+SL D GLH ++P
Sbjct: 200 -----VVSHVLTKELQYYFDKVTALVRGAGRAEASDRDVDLLARALRSLGEDVGLHNLMP 254
Query: 319 RMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQL 378
FI E ++ +L L L++M++AL+ N + +E YLH+L+PS+++C+V+K+L
Sbjct: 255 YFTQFITEETTASL--RDLPRLRVLIQMIRALISNPDINVELYLHQLMPSVVTCVVAKRL 312
Query: 379 CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
C + D HW+LRD A+ + V F + +IQ R+TR L A+ D K + YGA+
Sbjct: 313 CQNLDED-HWSLRDDAANTVAFVCAKFGAAYPSIQPRITRTLLRALLDTK-PLTTHYGAV 370
Query: 439 AG 440
G
Sbjct: 371 RG 372
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 5 GTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIY--------------- 49
++++ S+ +A++IG P D+AAK L+ ++ Y + IIQ
Sbjct: 21 ASTYAPASVVAVADTIGAPRPSDEAAKALASDVEYRLRTIIQDAIKIMRHCKRETLRAEV 80
Query: 50 ------------------GLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
L + P G + + DE+E+D +L+T P+
Sbjct: 81 RERWRDAVRAVNDGRCNAALKLRNCEPLYGFGTGTSSVFYLDEREIDVRELITKRLPRPP 140
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 125
++ +L HWLA+EGVQP +PENP P+ + L+
Sbjct: 141 VDVNLVPHWLAVEGVQPMIPENPMPLAPEPKPLQ 174
>gi|156044847|ref|XP_001588979.1| hypothetical protein SS1G_09612 [Sclerotinia sclerotiorum 1980]
gi|154694007|gb|EDN93745.1| hypothetical protein SS1G_09612 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 161/321 (50%), Gaps = 24/321 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M KR L DI AL + ++EP+YG ++ L F AS G G+ L + +++EV
Sbjct: 48 AMRFMHQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEV 107
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLA+EGVQP++P+NP + A L
Sbjct: 108 DFEKLINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAEARANDLVP----------- 156
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG-----RRF 301
G + L L + V VK L H +S E L++ +I A + D R
Sbjct: 157 ---KGPGANPALGALAGNDNVSVKPLVKHIVSKELILFFDKIRAAILDDDNDPEVVTLRE 213
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ +DPGLH+++P FIAE KV NL +L ++++ AL+ N++L++ Y
Sbjct: 214 SALESVRSDPGLHQLVPYFVHFIAE--KVTHSLGNLFVLQQMLKLSDALISNKTLFVNPY 271
Query: 362 LHELLPSILSCIVSKQL--CGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
+ L P IL+C+V + L E + LRD A+ L+ +SK + S ++ R+ R
Sbjct: 272 ISSLCPPILTCLVGRTLGTGASDELKEKYQLRDTAASLIGVISKKYTESNAQLRARLARS 331
Query: 420 LSNAINDPKINFPSLYGAIAG 440
DP + YGAI+G
Sbjct: 332 CLKFFLDPTRSPGEYYGAISG 352
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI L ++A + LS + Y K
Sbjct: 11 DNVRDVAESVGISQLGEEAVRALSQEVEYRVGQVIVEAMRFMHQGKRTVLGTQDISQALK 70
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 130
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LA+EGVQP++P+NP + A L
Sbjct: 131 LAVEGVQPSIPQNPTTAEARANDL 154
>gi|412986365|emb|CCO14791.1| predicted protein [Bathycoccus prasinos]
Length = 647
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 176/349 (50%), Gaps = 42/349 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYG----LTVSQFLPFKHASGGGRELHFTDE 183
+ KC S+R L DI+ AL ++ EP+YG + +F+ K G ++ +T +
Sbjct: 51 ALKCTKRSRRNVLTTEDINAALRIRMCEPLYGFPSNMPSQEFVKVK----GTNDVFYTYD 106
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP------------PVDKSAQ 231
+E+D LL+ P ++ ++ HWLAI+GVQP +PENP +++
Sbjct: 107 EELDVNKLLSEPLPPPSIAINVVPHWLAIDGVQPLIPENPSLDSQIYYQERAKEREETLA 166
Query: 232 KLESIDPI----------SKLGKKDKDTSGKPTSAKLEKLRNVETV----HVKQLATHEL 277
K ++ P ++ G+K D +G+ ++ + + H L
Sbjct: 167 KAKAKKPTVTGPPPLPSATEGGEKGGDEAGEKKEGDAQQHLQQQQQKEQGKFAPVVQHVL 226
Query: 278 SVEQQLYYKEITEACVG----SDEGRRF--EALQSLATDPGLHEMLPRMCTFIAEGVKVN 331
S E Q+Y+ IT G +DE R A+ +L TD GL ++P FI+ V+ N
Sbjct: 227 SRELQVYFDRITALLRGGGGANDEERGLLNAAIGTLQTDAGLANLIPYFAKFISTEVQTN 286
Query: 332 VVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALR 391
+ NL L+ +MR ++AL+ N + LE YLH+L+PS+L+CIV+K+L PE DNHW LR
Sbjct: 287 L--RNLRKLLAMMRAIEALVQNPTANLELYLHQLMPSVLTCIVAKRLSENPEKDNHWQLR 344
Query: 392 DFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
AS+ + ++ + + +Q RVT L + + P+++GA+ G
Sbjct: 345 VLASKTVAEICECYGEEYATLQPRVTATLQKGLKATQSPLPTIFGALVG 393
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 38/142 (26%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------- 46
T S S++ IAE+ G + DD AK + ++ Y + IIQ
Sbjct: 10 THLSAASIQTIAEAFGF-VISDDVAKAFAPDVEYRLRDIIQEALKCTKRSRRNVLTTEDI 68
Query: 47 ----------PIYG----LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
P+YG + +F+ K G ++ +T ++E+D LL+ P ++
Sbjct: 69 NAALRIRMCEPLYGFPSNMPSQEFVKVK----GTNDVFYTYDEELDVNKLLSEPLPPPSI 124
Query: 93 ETHLRTHWLAIEGVQPTVPENP 114
++ HWLAI+GVQP +PENP
Sbjct: 125 AINVVPHWLAIDGVQPLIPENP 146
>gi|451854028|gb|EMD67321.1| hypothetical protein COCSADRAFT_34148 [Cochliobolus sativus ND90Pr]
Length = 476
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 47/349 (13%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H KR L DI +AL + N+EP+YG ++ L F AS G G+ L+
Sbjct: 39 AQVLEE-ALKFMRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLY 97
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP
Sbjct: 98 YVEDEEVDFEKLINAPLPKVPREITFTAHWLAVEGVQPSIPQNP---------------- 141
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
D G + L ++ V+VK L H LS E Q + +++ A V DE
Sbjct: 142 -NTNTGDLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFNKLSGALV--DETN 198
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ AL +++T+PG+H++ + +FIAE V N+ NL +L +MR +ALL+NQ++
Sbjct: 199 IEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNM--KNLFILSQMMRASEALLNNQAI 256
Query: 357 YLEKYLHELLPSILSCIVSKQL--CGRP-------------------EADNHWALRDFAS 395
YL+ Y+ ++P IL+C + +L +P A + + LR A+
Sbjct: 257 YLDPYIAYMVPPILTCCIGGKLGPANQPAPSNASSETLGGAVPDYSRAASDAFYLRTLAA 316
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLV 444
LL + + +++S +++R+ R DP + +GA+ LV
Sbjct: 317 HLLRNICRKYSSSNQGLKSRIARTCLKQFMDPDKTVGAHFGALQALLLV 365
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L D+ +EL+ ++ + K
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK E HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP++P+NP
Sbjct: 128 LAVEGVQPSIPQNP 141
>gi|366993030|ref|XP_003676280.1| hypothetical protein NCAS_0D03380 [Naumovozyma castellii CBS 4309]
gi|342302146|emb|CCC69919.1| hypothetical protein NCAS_0D03380 [Naumovozyma castellii CBS 4309]
Length = 516
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 182/354 (51%), Gaps = 46/354 (12%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG ++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKREILTTDDVAKALRILNVEPLYGYHDGSAENKSVSFAKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ +E+E+DF+ L+ P+ HWLA+EG+QP + ENP PP+ + A
Sbjct: 109 YLNEEEIDFDKLINEPLPQVPRIPTFTAHWLAVEGIQPAIVENPNLNDVRISQPPIIRGA 168
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVE---------TVHVKQLATHELSVEQ 281
+ ++ + ++ + L + +N E VK L H LS E
Sbjct: 169 ----IVTALNDASIQTSSSAAISSRISLNEAKNGEQFSMVKPGQNTEVKPLVKHVLSKEL 224
Query: 282 QLYYKEITEACV---GSDEGRRFE--ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
Q+Y+ ++ A + +++ +R + AL SL TD GLH+++P FIAE + N+ +N
Sbjct: 225 QIYFNKVIAALITKEDTEDAQRMKTAALTSLKTDSGLHQLVPYFIQFIAEQITHNL--SN 282
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN---------- 386
L LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P D
Sbjct: 283 LELLTTILEMIYSLLSNPSIFLDPYIHSLMPSILTLLLAKKLGGAPTQDTPEEMHEFLEK 342
Query: 387 HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
ALRDFA+ LL V K F +++ R+TR L D F + YG + G
Sbjct: 343 TNALRDFAASLLEYVLKKFPQIYKSLKPRITRTLLKTFLDTNRVFGTYYGCLKG 396
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 43/154 (27%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++K +A+S+G+ N+ +D K L+ ++ Y II+
Sbjct: 15 DTVKDVADSLGLENINEDVLKALAMDVEYRILEIIEQAVKFKRHSKREILTTDDVAKALR 74
Query: 47 -----PIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
P+YG ++ + F K + GG+ +++ +E+E+DF+ L+ P+
Sbjct: 75 ILNVEPLYGYHDGSAENKSVSFAKVNTSGGQSVYYLNEEEIDFDKLINEPLPQVPRIPTF 134
Query: 97 RTHWLAIEGVQPTVPENP---------PPVDKSA 121
HWLA+EG+QP + ENP PP+ + A
Sbjct: 135 TAHWLAVEGIQPAIVENPNLNDVRISQPPIIRGA 168
>gi|451999943|gb|EMD92405.1| hypothetical protein COCHEDRAFT_1174311 [Cochliobolus
heterostrophus C5]
Length = 476
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 178/349 (51%), Gaps = 47/349 (13%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H KR L DI +AL + N+EP+YG ++ L F AS G G+ L+
Sbjct: 39 AQVLEE-ALKFMRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLY 97
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP + D +
Sbjct: 98 YVEDEEVDFEKLINAPLPKVPREITFTAHWLAVEGVQPSIPQNP--------NTNTADLL 149
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
K G + L ++ V+VK L H LS E Q + +++ A V DE
Sbjct: 150 PK---------GPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFNKLSGALV--DETN 198
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ AL +++T+PG+H++ + +FIAE V N+ NL +L +MR +ALL+NQ++
Sbjct: 199 IEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNM--KNLFILSQMMRASEALLNNQAI 256
Query: 357 YLEKYLHELLPSILSCIVSKQL-----------------CGRPE----ADNHWALRDFAS 395
YL+ Y+ ++P IL+C + +L P+ A + + LR A+
Sbjct: 257 YLDPYIAYMVPPILTCCIGGKLGPANQTAPSNASSETLGGAVPDYSRAASDAFYLRTLAA 316
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLV 444
LL + + +++S +++R+ R DP + +GA+ LV
Sbjct: 317 HLLRNICRKYSSSNQGLKSRIARTCLKQFMDPDKTVGAHFGALQALLLV 365
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L D+ +EL+ ++ + K
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK E HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP++P+NP
Sbjct: 128 LAVEGVQPSIPQNP 141
>gi|330916461|ref|XP_003297422.1| hypothetical protein PTT_07833 [Pyrenophora teres f. teres 0-1]
gi|311329873|gb|EFQ94469.1| hypothetical protein PTT_07833 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 178/349 (51%), Gaps = 47/349 (13%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H KR L DI +AL + N+EP+YG ++ L F AS G G+ L+
Sbjct: 39 AQVLEE-ALKFMRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLY 97
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP + D +
Sbjct: 98 YVEDEEVDFEKLINAPLPKVPREITFTAHWLAVEGVQPSIPQNP--------NTNTADLL 149
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
K G + L ++ V+VK L H LS E Q + +++ A + DE
Sbjct: 150 PK---------GPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFNKLSGALI--DETN 198
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ AL +++T+PG+H++ + +FIAE V N+ NL +L +MR +ALL NQ++
Sbjct: 199 IEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNM--KNLFILSQMMRAAEALLRNQAI 256
Query: 357 YLEKYLHELLPSILSCIV----------------SKQLCGRP-----EADNHWALRDFAS 395
YL+ Y+ ++P IL+C + S+ L G A + + LR A+
Sbjct: 257 YLDPYVAYMVPPILTCCIGGKLGPTSHQVPSNASSETLNGTAPDYSRAAQDAFYLRTLAA 316
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLV 444
LL + + +TS ++TR+ R DP+ + + +GA+ LV
Sbjct: 317 HLLKDICRKHSTSNQGLKTRIARTCLKQFMDPEKSVGTHFGALQALLLV 365
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L D+ +EL+ ++ + K
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK E HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP++P+NP
Sbjct: 128 LAVEGVQPSIPQNP 141
>gi|334183300|ref|NP_001031188.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194966|gb|AEE33087.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 428
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 147/266 (55%), Gaps = 34/266 (12%)
Query: 176 RELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 235
R+L+F D+K+V+ ++++ P + + + HWLAI+G+QP++P+N P L++
Sbjct: 10 RDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP--------LQA 61
Query: 236 IDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS 295
I + + KD + + LS + Q+Y+ ++TE +
Sbjct: 62 ISDLKRSEYKDDGLAARQV----------------------LSKDLQIYFDKVTEWALTQ 99
Query: 296 DEGRRF-EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
F +AL SL DPGLH ++P +FIAE + N+ +N +L+ LMR+ ++LL N
Sbjct: 100 SGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM--DNYPILLALMRLARSLLHNP 157
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+++E YLH+L+PSI++C+++K+L GR +DNHW LR+F + + K F +N+
Sbjct: 158 HVHIEPYLHQLMPSIITCLIAKRL-GRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLP 216
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
RVTR L + DP P YGAI G
Sbjct: 217 RVTRSLLHTFLDPTKALPQHYGAIQG 242
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 35/49 (71%)
Query: 67 RELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP 115
R+L+F D+K+V+ ++++ P + + + HWLAI+G+QP++P+N P
Sbjct: 10 RDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSP 58
>gi|303272643|ref|XP_003055683.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463657|gb|EEH60935.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 548
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 161/320 (50%), Gaps = 37/320 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTV-SQFLPFKHASGGGRELHFTDEKEVDF 188
K M HSKRV+L D++ +L MK +E +YG + + FK G + KE++
Sbjct: 55 KFMRHSKRVQLSTEDVNSSLKMKKVEALYGFPANAPAIAFKEVPGHP-DFFTQASKEIEL 113
Query: 189 EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKD 248
+D+L P+ + ++ HWLA++GVQP +PENPP LG
Sbjct: 114 KDILAMKLPRPPIAVNVVPHWLAVDGVQPLIPENPP-----------------LG----- 151
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF----EAL 304
G+ LE +V+ + + LS E QLY+ +T G G AL
Sbjct: 152 -PGENLRPDLEADIDVDE-RARAMFRAPLSKELQLYFDRVTAVIRGGGAGEEAPMLRAAL 209
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
SLATD GLH+++P + F+ V ++ L L L A++ N ++++E YLH+
Sbjct: 210 ASLATDAGLHQLMPYLVQFVQTEVAKSL--RRLPKLRALTAATLAIVANPNVHVELYLHQ 267
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR----VTRLL 420
+PSI++C+V+K+LC P+ +NHWALR+ A+ + V + F IQ R +TR L
Sbjct: 268 FMPSIVTCMVAKRLCASPD-ENHWALREQAAETMNFVCEKFGREYPTIQARSIHWITRTL 326
Query: 421 SNAINDPKINFPSLYGAIAG 440
S A+ D + YGAI G
Sbjct: 327 SKALLDETKPLSTHYGAIVG 346
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 31/134 (23%)
Query: 12 SMKVIAESIGIPNLPDDAAKELSDNITY--------CCKVI------------------- 44
S+ IAE++G NLPD+ A+ L+ ++ Y CK +
Sbjct: 17 SVSAIAETVGFDNLPDEVARALAPDVEYRLREVIQDACKFMRHSKRVQLSTEDVNSSLKM 76
Query: 45 --IQPIYGLTV-SQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
++ +YG + + FK G + KE++ +D+L P+ + ++ HWL
Sbjct: 77 KKVEALYGFPANAPAIAFKEVPGHP-DFFTQASKEIELKDILAMKLPRPPIAVNVVPHWL 135
Query: 102 AIEGVQPTVPENPP 115
A++GVQP +PENPP
Sbjct: 136 AVDGVQPLIPENPP 149
>gi|365990257|ref|XP_003671958.1| hypothetical protein NDAI_0I01460 [Naumovozyma dairenensis CBS 421]
gi|343770732|emb|CCD26715.1| hypothetical protein NDAI_0I01460 [Naumovozyma dairenensis CBS 421]
Length = 517
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 176/356 (49%), Gaps = 51/356 (14%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASGGGRELHF 180
+++ FK HSKR L D+ AL N+EP+YG ++ + F + GG+ +++
Sbjct: 51 QAVKFK--RHSKRDMLTTDDVAKALRALNVEPLYGYHDGSAENKNVSFGKVTTGGQSIYY 108
Query: 181 TDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSAQ 231
+++EVD + L+ P+ HWLA+EGVQP + ENP PP + A
Sbjct: 109 LNDEEVDLDKLINEPLPQVPRVPTFTAHWLAVEGVQPAIIENPNLNDIRASQPPFVRGA- 167
Query: 232 KLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVH-----------VKQLATHELSVE 280
++ L TS + + N E+ H VK L H LS E
Sbjct: 168 ------IVTALNDTSLQTSTTSNESAMIVSENKESDHFSIVKPGQNTEVKPLVKHVLSKE 221
Query: 281 QQLYYKEITEACVGSD------EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ 334
Q+Y+ ++ A + +D + + AL SL TD GLH+++P FIAE + N+
Sbjct: 222 LQIYFNKVIAALITTDTENPDAQYMKTAALTSLRTDSGLHQLVPYFIQFIAEQITHNL-- 279
Query: 335 NNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCG-----RPEA----- 384
+NL LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G PE
Sbjct: 280 SNLELLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGTLTHDTPEELHESL 339
Query: 385 DNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ ALRDFA+ LL V K F +++ R+TR L D F + YG + G
Sbjct: 340 ERTNALRDFAASLLDYVLKKFPQIYKSLKPRITRTLLKTFLDTNRVFGTYYGCLRG 395
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 33/137 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++K +A+S+G+ N+ D K L+ ++ Y II+
Sbjct: 15 DTVKDVADSLGLENINADVLKALAMDVEYRILEIIEQAVKFKRHSKRDMLTTDDVAKALR 74
Query: 47 -----PIYGL----TVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG ++ + F + GG+ +++ +++EVD + L+ P+
Sbjct: 75 ALNVEPLYGYHDGSAENKNVSFGKVTTGGQSIYYLNDEEVDLDKLINEPLPQVPRVPTFT 134
Query: 98 THWLAIEGVQPTVPENP 114
HWLA+EGVQP + ENP
Sbjct: 135 AHWLAVEGVQPAIIENP 151
>gi|189209772|ref|XP_001941218.1| TATA-binding protein-associated-factor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977311|gb|EDU43937.1| TATA-binding protein-associated-factor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 476
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 178/349 (51%), Gaps = 47/349 (13%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H KR L DI +AL + N+EP+YG ++ L F AS G G+ L+
Sbjct: 39 AQVLEE-ALKFMRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLY 97
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ PK E HWLA+EGVQP++P+NP + D +
Sbjct: 98 YVEDEEVDFEKLINAPLPKVPREITFTAHWLAVEGVQPSIPQNP--------NTNTADLL 149
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
K G + L ++ V+VK L H LS E Q + +++ A + DE
Sbjct: 150 PK---------GPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFNKLSGALI--DETN 198
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
+ AL +++T+PG+H++ + +FIAE V N+ NL +L +MR +ALL NQ++
Sbjct: 199 IEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNM--KNLFILSQMMRAAEALLKNQAI 256
Query: 357 YLEKYLHELLPSILSCIV----------------SKQLCGRP-----EADNHWALRDFAS 395
YL+ Y+ ++P IL+C + S+ L G A + + LR A+
Sbjct: 257 YLDPYVAYMVPPILTCCIGGKLGPTSHQVPSNASSETLNGTAPDYSRAAQDAFYLRTLAA 316
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLV 444
LL + + +TS +++R+ R DP+ + + +GA+ LV
Sbjct: 317 HLLKDICRKHSTSNQGLKSRIARTCLKQFMDPEKSVGTHFGALQALLLV 365
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI +L D+ +EL+ ++ + K
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK E HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 101 LAIEGVQPTVPENP 114
LA+EGVQP++P+NP
Sbjct: 128 LAVEGVQPSIPQNP 141
>gi|195391944|ref|XP_002054619.1| GJ24553 [Drosophila virilis]
gi|194152705|gb|EDW68139.1| GJ24553 [Drosophila virilis]
Length = 397
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 129/216 (59%), Gaps = 10/216 (4%)
Query: 225 PVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLY 284
P+D ++ + S+ P +++ PTSA L+ E V + LS EQQ +
Sbjct: 80 PLDTASIRRRSLTPEARV-------LTAPTSAPKRWLKR-EQVLLMGNKKFPLSKEQQEF 131
Query: 285 YKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM 344
+ ITE C+G E R +ALQ L++D L MLP++ FI E VKVNVVQ N ALL+YLM
Sbjct: 132 FVLITETCMGISEPTRRDALQRLSSDSSLQPMLPKLSLFIGEAVKVNVVQQNFALLLYLM 191
Query: 345 RMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKN 404
RMV +LL N +L L+ YLH +P++LSC VS+Q+C P NHWALR++A+ ++ ++ K
Sbjct: 192 RMVHSLLVNPNLKLQNYLHLFIPAVLSCTVSRQVCAFPAVQNHWALREYAANIMAELVKT 251
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
F++ N+I RV + + + ++YG++ G
Sbjct: 252 FDSDDNSIMPRVINIYKAGLQSSSLT--TIYGSLIG 285
>gi|339234154|ref|XP_003382194.1| conserved hypothetical protein [Trichinella spiralis]
gi|316978834|gb|EFV61753.1| conserved hypothetical protein [Trichinella spiralis]
Length = 484
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 24/302 (7%)
Query: 139 KLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 198
+L DI L + +PI +LP + A G L+ ++E++ L + N +
Sbjct: 56 RLTTSDITRILRNRGAQPINFFGNGAYLPARIAGKDG--LYVDVDEELELSTFLKDCNLR 113
Query: 199 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKL 258
LE+ L +WL E + +K+ L L +K + + + +
Sbjct: 114 PPLESRLFAYWLLNENEE---------TEKARVDL-------MLAEKKVEIEQQQNALEE 157
Query: 259 EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLP 318
K + +E V+ + +S E Q Y+ +TEACV DE RR AL LA D L +LP
Sbjct: 158 RKQQRLECVYPMLCRPNSISKEMQSYFFTVTEACVCHDEERRKLALAGLANDTSLKCLLP 217
Query: 319 RMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQL 378
+FI G+ VN + ++ + IYLMRM+ A+L N S + YLH LLPS+L+C + +L
Sbjct: 218 HFVSFIHRGILVNALGSSFVVCIYLMRMIDAILKNPSFNCDLYLHRLLPSMLNCALYTRL 277
Query: 379 CGRPEADNHWALRDFASRLLTQ-VSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
+PEA+ HW LRDF+++ + + VSKN +++TRV +LL INDP +F ++YGA
Sbjct: 278 SAKPEANEHWRLRDFSAKNIAKVVSKN-----KHLRTRVEKLLGRVINDPHSSFHNIYGA 332
Query: 438 IA 439
+A
Sbjct: 333 VA 334
>gi|255719722|ref|XP_002556141.1| KLTH0H06006p [Lachancea thermotolerans]
gi|238942107|emb|CAR30279.1| KLTH0H06006p [Lachancea thermotolerans CBS 6340]
Length = 511
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 180/363 (49%), Gaps = 62/363 (17%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASG-GGRELH 179
+++ FK H+KR L DI AL + N+EP+YG ++ F + GG+ L+
Sbjct: 51 QAVKFK--RHAKREVLTTEDIARALRVLNVEPLYGYQDGSARAKDASFSKVNAPGGQTLY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ +++EVDF+ L+ PK THWLAIEGVQPT+P+NP PP+ + A
Sbjct: 109 YLNDEEVDFDKLINEPLPKVPRLPTFTTHWLAIEGVQPTIPQNPSLNDIRMSQPPIVRGA 168
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETV------HVKQLATHELSVEQQLY 284
+ DTS + +++ ++ +++ + VK L H LS E Q+Y
Sbjct: 169 -----------IVTTINDTSFQTSASDEKETQHISLIKPGQANEVKPLVKHVLSKELQIY 217
Query: 285 YKEITEACVGSDEGR-----RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLAL 339
+ ++ A + D R AL SL +D GLH+++P FIAE + N+ ++L L
Sbjct: 218 FDKVVGALISKDRDDKAHHLRAAALTSLRSDTGLHQLVPYFIQFIAEQITHNL--SDLDL 275
Query: 340 LIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW----------- 388
L ++ M+ +LL N ++L+ Y+H L+PSIL+ +++K+L P ++
Sbjct: 276 LTTMLEMIYSLLSNTHVFLDPYIHSLMPSILTLLLAKKLGDNPPPNSSKEQREASEKVSK 335
Query: 389 -----------ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
ALRDFA+ LL V + F +++ RV R L D +F + YG
Sbjct: 336 DTGTEFLEKTNALRDFAASLLDHVLRKFPQVYKSLKPRVMRTLLKTFLDTNRSFGTYYGC 395
Query: 438 IAG 440
I G
Sbjct: 396 IKG 398
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 43/154 (27%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +A+S+GI N+ DD + L+ ++ Y +
Sbjct: 15 DTVKDVADSLGITNISDDVLRSLAMDVEYRILEIVEQAVKFKRHAKREVLTTEDIARALR 74
Query: 43 VI-IQPIYGL----TVSQFLPFKHASG-GGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG ++ F + GG+ L++ +++EVDF+ L+ PK
Sbjct: 75 VLNVEPLYGYQDGSARAKDASFSKVNAPGGQTLYYLNDEEVDFDKLINEPLPKVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP---------PPVDKSA 121
THWLAIEGVQPT+P+NP PP+ + A
Sbjct: 135 TTHWLAIEGVQPTIPQNPSLNDIRMSQPPIVRGA 168
>gi|440632593|gb|ELR02512.1| hypothetical protein GMDG_01038 [Geomyces destructans 20631-21]
Length = 453
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 24/319 (7%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDF 188
+ M KR L DI AL + ++EP+YG ++ L F AS G G+ L + +++EVDF
Sbjct: 50 RFMQQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDF 109
Query: 189 EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKD 248
E L+ PK + HWLA+EGVQP++P+NP + Q+L K
Sbjct: 110 EKLINAPLPKVPRDISFTAHWLAVEGVQPSIPQNPTTAEARTQELVP-----------KG 158
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RFEA 303
+ PT L L + V K H LS E LY+++I A + +D R A
Sbjct: 159 ANANPT---LTALTGNDNVGFKPQVKHILSKELMLYFEKIRTAILDTDPDDDVVRLRVAA 215
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L S+ D L +++P FIAE V N N+ +L +M + AL N+ L+++ Y
Sbjct: 216 LASVENDESLQQLVPYFVQFIAEKVTHNT--KNIFVLQTMMELASALTRNERLFIDPYTT 273
Query: 364 ELLPSILSCIVSKQLCGRP--EADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLS 421
L S+L+C+V + L E +H+ LR+F++ LL ++K + S+ ++ R+ R +
Sbjct: 274 TLCSSVLTCLVGRGLTNATPVEVKDHYKLREFSASLLGHIAKKYAKSSQQLKPRLARTVL 333
Query: 422 NAINDPKINFPSLYGAIAG 440
+PK YGAI+G
Sbjct: 334 KYFLNPKKPLDQHYGAISG 352
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
++ ++++ +AES+GI L ++A + LS + Y
Sbjct: 8 WNADNVRDVAESVGISQLGEEAVRALSQEVEYRVGQVIVEATRFMQQGKRTVLGTQDISQ 67
Query: 40 CCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
KV+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ PK +
Sbjct: 68 ALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDISFT 127
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLA+EGVQP++P+NP + Q+L
Sbjct: 128 AHWLAVEGVQPSIPQNPTTAEARTQEL 154
>gi|211938737|gb|ABK30921.2| RT01020p [Drosophila melanogaster]
Length = 594
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR AL++++TDP L E+LPR+ F
Sbjct: 174 VEQVLLKPSKRYPLSMEQQNFFELVTEACVGDLESRRVLALKAISTDPSLEELLPRLTKF 233
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q NL LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P
Sbjct: 234 IADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPN 293
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+++HWALR+++ ++ + + F+ + N I RV + + A+ K +++GA+ G G
Sbjct: 294 SEDHWALREYSGNIMAHIVRQFDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGLG 350
>gi|363987306|gb|AEW43895.1| FI17401p1 [Drosophila melanogaster]
Length = 594
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR AL++++TDP L E+LPR+ F
Sbjct: 174 VEQVLLKPSKRYPLSMEQQNFFELVTEACVGDLESRRVLALKAISTDPSLEELLPRLTKF 233
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q NL LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P
Sbjct: 234 IADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPN 293
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+++HWALR+++ ++ + + F+ + N I RV + + A+ K +++GA+ G G
Sbjct: 294 SEDHWALREYSGNIMAHIVRQFDAADNGILPRVIGVYNKAL--LKKPLTTVFGAVIGLG 350
>gi|45550693|ref|NP_649547.3| meiosis I arrest, isoform A [Drosophila melanogaster]
gi|221377901|ref|NP_001138010.1| meiosis I arrest, isoform B [Drosophila melanogaster]
gi|45446367|gb|AAF52013.3| meiosis I arrest, isoform A [Drosophila melanogaster]
gi|220903002|gb|ACL83469.1| meiosis I arrest, isoform B [Drosophila melanogaster]
Length = 589
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR AL++++TDP L E+LPR+ F
Sbjct: 169 VEQVLLKPSKRYPLSMEQQNFFELVTEACVGDLESRRVLALKAISTDPSLEELLPRLTKF 228
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q NL LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P
Sbjct: 229 IADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPN 288
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+++HWALR+++ ++ + + F+ + N I RV + + A+ K +++GA+ G G
Sbjct: 289 SEDHWALREYSGNIMAHIVRQFDAADNGILPRVIGVYNKAL--LKKPLTTVFGAVIGLG 345
>gi|54306296|gb|AAV33343.1| TAF6-like protein [Drosophila melanogaster]
Length = 593
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR AL++++TDP L E+LPR+ F
Sbjct: 173 VEQVLLKPSKRYPLSMEQQNFFELVTEACVGDLESRRVLALKAISTDPSLEELLPRLTKF 232
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q NL LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P
Sbjct: 233 IADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPN 292
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+++HWALR+++ ++ + + F+ + N I RV + + A+ K +++GA+ G G
Sbjct: 293 SEDHWALREYSGNIMAHIVRQFDAADNGILPRVIGVYNKAL--LKKPLTTVFGAVIGLG 349
>gi|25013131|gb|AAN71679.1| SD16013p, partial [Drosophila melanogaster]
Length = 566
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V +K + LS+EQQ +++ +TEACVG E RR AL++++TDP L E+LPR+ F
Sbjct: 173 VEQVLLKPSKRYPLSMEQQNFFEFVTEACVGDLESRRVLALKAISTDPSLEELLPRLTKF 232
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q NL LL+YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P
Sbjct: 233 IADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPN 292
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+++HWALR+++ ++ + + F+ + N I RV + + A+ K +++GA+ G G
Sbjct: 293 SEDHWALREYSGNIMAHIVRQFDAADNGILPRVIGVYNKAL--LKKPLTTVFGAVIGLG 349
>gi|50311083|ref|XP_455565.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644701|emb|CAG98273.1| KLLA0F10659p [Kluyveromyces lactis]
Length = 516
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 184/362 (50%), Gaps = 57/362 (15%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPFKHASGG-GRELH 179
+++ FK HSKR L D+ AL + N+EP+YG ++ + F G G+ L+
Sbjct: 54 QAVKFK--RHSKRSTLTTSDVAKALRVLNVEPLYGFEEGSAKNEPVKFNKLEGANGQTLY 111
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP---------PVDKSA 230
+ D++E+DFE L+ P+ HWLA+EG+QP +P+NP P+ + A
Sbjct: 112 YLDDEEIDFEKLINTPLPEVPRLPTFTAHWLAVEGIQPAIPQNPNINELRLSQVPLQRGA 171
Query: 231 QKLESIDPISK----------LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVE 280
+ P+++ + ++ + T+ P S +++ E K L H LS E
Sbjct: 172 ----IVSPLNETSVQTSLQTNVNEERQATANGPISTQVKPGAASE---AKPLVKHVLSKE 224
Query: 281 QQLYYKEITEACVGSDEG-----RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN 335
Q+Y++++ A +E R AL SL +D GLH+++P FIAE + ++
Sbjct: 225 LQIYFEKVASALTSKEEDINSQRMRAAALTSLKSDTGLHQLVPYFIQFIAEQITHHL--E 282
Query: 336 NLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCG---RPEADNHW---- 388
+L LL ++ M+ +LL NQS++L+ Y+H L+PSIL+ +++K+L G + +D+
Sbjct: 283 DLELLTTMLEMIYSLLSNQSVFLDPYIHSLMPSILTLLLAKRLGGNGSKNSSDDKIVDQQ 342
Query: 389 ----------ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
A+RDFAS LL V K F +++ RVTR L D +F + YG +
Sbjct: 343 NKKEFLEKTNAVRDFASSLLDHVLKKFPKVHKSLKPRVTRTLLKTFLDINRSFGTYYGCV 402
Query: 439 AG 440
G
Sbjct: 403 RG 404
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +A+S+GI N DD + L+ ++ Y +
Sbjct: 18 DTVKDVADSLGISNTNDDVLRSLAMDVEYRILEIVEQAVKFKRHSKRSTLTTSDVAKALR 77
Query: 43 VI-IQPIYGL----TVSQFLPFKHASGG-GRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG ++ + F G G+ L++ D++E+DFE L+ P+
Sbjct: 78 VLNVEPLYGFEEGSAKNEPVKFNKLEGANGQTLYYLDDEEIDFEKLINTPLPEVPRLPTF 137
Query: 97 RTHWLAIEGVQPTVPENP 114
HWLA+EG+QP +P+NP
Sbjct: 138 TAHWLAVEGIQPAIPQNP 155
>gi|171693115|ref|XP_001911482.1| hypothetical protein [Podospora anserina S mat+]
gi|170946506|emb|CAP73307.1| unnamed protein product [Podospora anserina S mat+]
Length = 466
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 166/323 (51%), Gaps = 26/323 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M S R L D+ +A+ + +EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 51 SLRFMRASNRTTLTVQDVSNAMRVLQVEPLYGYESTRPLRYGEASLGPGQPLFYIEDEEV 110
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK +T +HWLA+EGVQP++P+NP + S+ KD
Sbjct: 111 DFEKLINAPLPKVPRDTSFTSHWLALEGVQPSIPQNPTTAETSS--------------KD 156
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V + H +S E LY+ +I A + D R
Sbjct: 157 LLPKGPGANPALAALAGNDNVSFRPAVKHVISKELILYFDKIQSAILDDDPDEEKTRLRM 216
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ +DPGLH++LP FIA V + + ++L +L +M + +A++ N + +L+ Y
Sbjct: 217 AALESVRSDPGLHQLLPYFVNFIANQVTLRL--DDLFVLRQMMELTEAIIQNPNFFLDPY 274
Query: 362 LHELLPSILSCIVSKQLCGRPEA----DNHWALRDFASRLLTQVSKNFNTSTNNIQTRVT 417
L IL+C++S +L G + + ++LR+ A+ LL ++ +N S ++ ++T
Sbjct: 275 ASSLAAPILTCLMSNKLGGIEDGTDTVKDQYSLRELAASLLGVLATKYNKSNRQLRPKLT 334
Query: 418 RLLSNAINDPKINFPSLYGAIAG 440
R +P L+GAI+G
Sbjct: 335 RTCLKYFMEPNRPPAVLFGAISG 357
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 31/144 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY-CCKVIIQ----------------------- 46
E+++ +A+SIGI +L D+ + L+ ++ Y +VII+
Sbjct: 15 ENVRDVADSIGI-SLGDEPLRVLAQDVEYRIGQVIIESLRFMRASNRTTLTVQDVSNAMR 73
Query: 47 -----PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
P+YG ++ L + AS G G+ L + +++EVDFE L+ PK +T +HW
Sbjct: 74 VLQVEPLYGYESTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDTSFTSHW 133
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LA+EGVQP++P+NP + S++ L
Sbjct: 134 LALEGVQPSIPQNPTTAETSSKDL 157
>gi|169615571|ref|XP_001801201.1| hypothetical protein SNOG_10944 [Phaeosphaeria nodorum SN15]
gi|160702992|gb|EAT81443.2| hypothetical protein SNOG_10944 [Phaeosphaeria nodorum SN15]
Length = 471
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 178/347 (51%), Gaps = 51/347 (14%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M H KR L DI AL + N+EP+YG ++ L F AS G G+ L+
Sbjct: 39 AQVLEE-AMKFMRHGKRTTLSTHDISHALKVLNVEPLYGYESTRPLRFGEASLGPGQPLY 97
Query: 180 FTDEKEVDFEDLLTNLNPKSALE---THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 236
+ +++EVDFE L+ PK E T + HWLA+EGVQP++P+NP +
Sbjct: 98 YVEDEEVDFEKLINAPLPKVPREITFTGIPAHWLAVEGVQPSIPQNP--------TTNTA 149
Query: 237 DPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD 296
D + K G + L ++ V+VK L H LS E Q + +++ A +D
Sbjct: 150 DLLPK---------GPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFAKLSSAL--TD 198
Query: 297 EGR---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDN 353
E + AL ++ T+PG+H++ + +FIAE V N+ NL +L +M+ +ALLDN
Sbjct: 199 ETNIEWQNAALAAIRTEPGIHQLTTYLLSFIAEKVTHNM--KNLFVLHQMMQATQALLDN 256
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLC-GRPEAD---------------------NHWALR 391
Q++YL+ Y+ ++P IL+C + L P+A +H+ LR
Sbjct: 257 QAIYLDPYMAYMVPPILTCCTGRHLGPTTPQASSNASSETLNRNGANGPVSSQFDHFELR 316
Query: 392 DFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
+A+ LL+++ + + S +++R+ R DP + + YGA+
Sbjct: 317 TYAASLLSRICQKGSASNQGLKSRIARTCLKQFMDPDKSPGTHYGAL 363
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 33/137 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELS----------------------------DNITYCCK 42
++++ +AES+GI +L D+ +EL+ +I++ K
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEAMKFMRHGKRTTLSTHDISHALK 67
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALE---THLR 97
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK E T +
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTGIP 127
Query: 98 THWLAIEGVQPTVPENP 114
HWLA+EGVQP++P+NP
Sbjct: 128 AHWLAVEGVQPSIPQNP 144
>gi|403216405|emb|CCK70902.1| hypothetical protein KNAG_0F02370 [Kazachstania naganishii CBS
8797]
Length = 555
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 175/392 (44%), Gaps = 80/392 (20%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----------------TVSQFL-- 166
+++ FK HSK L DI AL + N+EP+YG T F
Sbjct: 50 QAVKFK--RHSKTEILTTDDIAKALRVLNVEPLYGYHDSVTAKNGTHNTAHGTAQSFQEG 107
Query: 167 --PFKHA-SGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP 223
F+ + GG+++++ DE+EVDF+ L+ P THWLAIEGVQP + +NP
Sbjct: 108 QPSFRKVNTSGGQQVYYLDEEEVDFDKLVNKPLPPLPRLPTFTTHWLAIEGVQPAILQNP 167
Query: 224 ---------PPVDKSA--QKLESIDPISKLGKKDKDTSGKPTSAKL------------EK 260
PP + A L + + T+G + L
Sbjct: 168 NLNDIRTSLPPTTRGAIVTALNESNSLQTQPNASATTNGNGAAGTLQQQQREQHQLLASS 227
Query: 261 LRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR--------RFEALQSLATDPG 312
++ + + VK L H LS E Q+Y+ +I A DE + AL SL TD G
Sbjct: 228 VKPGQNIEVKPLVKHVLSKELQIYFNKIISALTVKDEATDDGDAQHMKLAALTSLKTDNG 287
Query: 313 LHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSC 372
LH+++P FIAE + N+ +NL LL ++ M+ +LL N S++LE Y+H L+PSIL+
Sbjct: 288 LHQLVPYFIQFIAEQITHNL--SNLELLTTILEMIYSLLSNPSIFLEPYIHSLMPSILTL 345
Query: 373 IVSKQLCGRPEA------------------------DNHWALRDFASRLLTQVSKNFNTS 408
+++K L G D ALRDFA+ LL V K F
Sbjct: 346 LLAKNLGGSSNGKGSPPATAGSTTAPPSIEEYNEQLDKANALRDFAASLLDYVLKKFPQV 405
Query: 409 TNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+++ RVTR L D F + YG++ G
Sbjct: 406 YKSLKPRVTRTLLKTFLDTNRVFGTYYGSLKG 437
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 59/170 (34%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +AES+G+ N+ +D K L +D+I +
Sbjct: 14 DTVKDVAESLGLDNINEDVLKALAMDVEYRILEIIEQAVKFKRHSKTEILTTDDIAKALR 73
Query: 43 VI-IQPIYGL----------------TVSQFL----PFKHA-SGGGRELHFTDEKEVDFE 80
V+ ++P+YG T F F+ + GG+++++ DE+EVDF+
Sbjct: 74 VLNVEPLYGYHDSVTAKNGTHNTAHGTAQSFQEGQPSFRKVNTSGGQQVYYLDEEEVDFD 133
Query: 81 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 121
L+ P THWLAIEGVQP + +NP PP + A
Sbjct: 134 KLVNKPLPPLPRLPTFTTHWLAIEGVQPAILQNPNLNDIRTSLPPTTRGA 183
>gi|323333660|gb|EGA75053.1| Taf6p [Saccharomyces cerevisiae AWRI796]
Length = 335
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 167/321 (52%), Gaps = 44/321 (13%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 13 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 70
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 71 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 130
Query: 231 -------QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
L++ + DT S L ++ + VK L H LS E Q+
Sbjct: 131 IVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNVKPGQNTEVKPLVKHVLSKELQI 187
Query: 284 YYKEITEACVG---SDEGRRF---EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNL 337
Y+ ++ +DE + AL SL TD GLH+++P FIAE + N+ ++L
Sbjct: 188 YFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNL--SDL 245
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW--------- 388
LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++K+L G P+ D+
Sbjct: 246 QLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERT 305
Query: 389 -ALRDFASRLLTQVSKNFNTS 408
ALRDFA+ LL V K ++S
Sbjct: 306 NALRDFAASLLDYVLKKISSS 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 34 SDNITYCCKVI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLN 87
+D+++ +V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+
Sbjct: 28 TDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPL 87
Query: 88 PKSALETHLRTHWLAIEGVQPTVPENP 114
P+ THWLA+EGVQP + +NP
Sbjct: 88 PQVPRLPTFTTHWLAVEGVQPAIIQNP 114
>gi|345308690|ref|XP_001520250.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Ornithorhynchus anatinus]
Length = 408
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 34/228 (14%)
Query: 139 KLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 198
KL D+D AL +KN+EP+YG F+PF+ SGGGREL ++ V D++ + P+
Sbjct: 65 KLTTNDVDFALQLKNVEPLYGFHTMDFIPFRLTSGGGRELGSFQKEIVSLNDIINSPLPQ 124
Query: 199 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKL 258
++L+ L+ HWL+IEG+QP +PENP P + +
Sbjct: 125 TSLDVVLKAHWLSIEGIQPVIPENP----------------------------IPGTERP 156
Query: 259 EKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLP 318
T ++ S +++Y++EIT AC+G+ + +R EAL SL T+ GL +MLP
Sbjct: 157 PPYPPQPTAIIR------CSPLEKMYFEEITRACLGACDLKRKEALDSLTTNSGLSQMLP 210
Query: 319 RMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
FI+EGV+VNV +L +L LM+MVKAL+ N +L LE+Y+ + L
Sbjct: 211 WFSNFISEGVRVNVGLRDLTVLTSLMQMVKALMANPTLNLERYVIKTL 258
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 29/145 (20%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M + T+ I+++K AE++GI L ++A + L D +T+ K I Q
Sbjct: 7 MKLANTALPIKTIKSWAEAVGISPLSEEACQVLVDEVTFRVKKITQEAKMFMQMGLHQKL 66
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
P+YG F+PF+ SGGGREL ++ V D++ + P+++
Sbjct: 67 TTNDVDFALQLKNVEPLYGFHTMDFIPFRLTSGGGRELGSFQKEIVSLNDIINSPLPQTS 126
Query: 92 LETHLRTHWLAIEGVQPTVPENPPP 116
L+ L+ HWL+IEG+QP +PENP P
Sbjct: 127 LDVVLKAHWLSIEGIQPVIPENPIP 151
>gi|310800694|gb|EFQ35587.1| TATA box binding protein associated factor [Glomerella graminicola
M1.001]
Length = 461
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M S+R L DI AL NIEP+YG ++ L + AS G G+ L + +++EV
Sbjct: 51 ALRFMRASRRTTLTVNDISTALKALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 110
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L
Sbjct: 111 DFEKLINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQELVP----------- 159
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L ++V + H +S E LY++++ A + + R
Sbjct: 160 ---KGPGANPALAALAGNDSVSFRPAVKHVVSKELILYFEKVQNALLDDNPDEEVVRLRQ 216
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ DPGLH+++P F+A V + +++ L M + AL+ N LYL+ Y
Sbjct: 217 AALESVRDDPGLHQLIPYFINFVANQVTHRL--DDVFTLRQAMELTAALIANTKLYLDPY 274
Query: 362 LHELLPSILSCIVSKQLCGRPEAD---NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
+ + +L+CI+ +++ G AD + LR+F++ LL Q+++ + S N ++ ++ R
Sbjct: 275 ANAIAAPVLTCILGRKIGGDDAADAMREQYQLREFSASLLGQIARKYAASNNLLRPKLVR 334
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP + +GAI G
Sbjct: 335 TCLKFFMDPDKPPATHFGAITG 356
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
++++ +AES+GI NL DDA + L+ ++ Y +
Sbjct: 14 DNVRDVAESVGITNLNDDALRCLTQDVEYRIGQVLVEALRFMRASRRTTLTVNDISTALK 73
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
I+P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 74 ALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 133
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 134 LAIEGVQPSIPQNPTTAESRSQEL 157
>gi|429861438|gb|ELA36127.1| transcription initiation factor tfiid complex 60 kda subunit
[Colletotrichum gloeosporioides Nara gc5]
Length = 461
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 169/322 (52%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R L DI AL + NIEP+YG ++ L F AS G G+ L + +++EV
Sbjct: 51 ALRFMRAARRTTLTVNDISTALKVLNIEPLYGYDSTRPLRFGEASLGPGQPLFYIEDEEV 110
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L
Sbjct: 111 DFEKLINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQELV------------ 158
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS--DE--GR-RF 301
G + L L +++ + H +S E LY++++ A + DE GR R
Sbjct: 159 --PKGPGANPALAALAGNDSISFRPAVKHVVSKELILYFEKVQNAILDDNPDEEVGRLRQ 216
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P F+A V + +++ +L M + AL+ N+ L+L+ Y
Sbjct: 217 AALASVRDDPGLHQLIPYFINFVANQVTHRL--DDVFILRQSMELTLALIQNKKLFLDPY 274
Query: 362 LHELLPSILSCIVSKQLCGRPEAD---NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
+ + +L+CI+S+++ +D + LR+F++ LL ++++ ++ S N ++ ++ R
Sbjct: 275 ANSIAAPVLTCILSRKIGAEDGSDAVKEQYKLREFSASLLGEIARKYSASNNLLRPKLVR 334
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP + +GAI+G
Sbjct: 335 TCLKFFMDPDKPPAAHFGAISG 356
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +AES+GIPNL D+A + L+ ++ Y K
Sbjct: 14 DNVKDVAESVGIPNLNDEALRCLTQDVEYRIGQVLVEALRFMRAARRTTLTVNDISTALK 73
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ I+P+YG ++ L F AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 74 VLNIEPLYGYDSTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 133
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 134 LAIEGVQPSIPQNPTTAESRSQEL 157
>gi|406866430|gb|EKD19470.1| transcription initiation factor TFIID complex 60 kDa subunit
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 459
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 159/322 (49%), Gaps = 27/322 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M KR L DI AL + ++EP+YG ++ L F AS G G+ L++ +++EV
Sbjct: 48 AMRFMHQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLYYIEDEEV 107
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLA+EGVQP +P+NP + A
Sbjct: 108 DFEKLINAPLPKVPRDVSFTAHWLAVEGVQPLIPQNPSTAEARAD-----------ASVA 156
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG-------R 299
K PT A L NV K L H +S E L++ +I A + DE
Sbjct: 157 KGPGANPTLAALAGNDNVPG---KPLVKHIVSKEMILFFDKIKAAIL--DESLDPEVVLL 211
Query: 300 RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
R A QS+ +DPGL +++P F+AE KV NL +L ++ + +A+++N+S Y +
Sbjct: 212 RNTAFQSVRSDPGLAQLVPYFLQFVAE--KVTHSLGNLFVLRQMIELTQAVIENKSHYAD 269
Query: 360 KYLHELLPSILSCIVSKQLCGR-PEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
Y L I++CI+ + L G + + +RD A LL QV + ++TS+ ++ ++TR
Sbjct: 270 PYALSLTAPIVTCIIGRNLGGEAAHLKDQYEVRDLAVSLLGQVVRKYSTSSTMLKAKLTR 329
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP YGA+ G
Sbjct: 330 TFLKNFLDPAKPLDVHYGAMCG 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 30/141 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
++++ +AES+GI L +DA + L++ + Y K
Sbjct: 11 DNIRDVAESVGISALNEDAVRTLANEVEYRLSQVIVEAMRFMHQGKRTVLGTQDISQALK 70
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L F AS G G+ L++ +++EVDFE L+ PK + HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLYYIEDEEVDFEKLINAPLPKVPRDVSFTAHW 130
Query: 101 LAIEGVQPTVPENPPPVDKSA 121
LA+EGVQP +P+NP + A
Sbjct: 131 LAVEGVQPLIPQNPSTAEARA 151
>gi|194898771|ref|XP_001978941.1| GG10968 [Drosophila erecta]
gi|190650644|gb|EDV47899.1| GG10968 [Drosophila erecta]
Length = 570
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V + ++ L+ EQQ +++ +TEAC+G E RR ALQ+L+TDP L +LPR+ TF
Sbjct: 143 VEQVLLNPWKSYPLTKEQQSFFELVTEACMGISESRRQRALQTLSTDPSLEVLLPRLITF 202
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q NL+LL+YLMRMV+A+L N L +YLH LLP++LSC+++KQ+C P+
Sbjct: 203 IADAVAINVTQQNLSLLLYLMRMVRAVLGNHRFSLLQYLHLLLPAVLSCLLAKQVCASPD 262
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVT-RLLSNAINDPKINFP--SLYGAIAG 440
++HWALR+++ ++ + + FN + N+I RV ++L + P +++GA+ G
Sbjct: 263 VEDHWALREYSGNIMAHIGRQFNAADNSILPRVIGQVLILVYKKALLMKPLTTVFGAVIG 322
Query: 441 EG 442
G
Sbjct: 323 LG 324
>gi|380476480|emb|CCF44690.1| TATA box binding protein associated factor [Colletotrichum
higginsianum]
Length = 461
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M S+R L DI AL NIEP+YG ++ L + AS G G+ L + +++EV
Sbjct: 51 ALRFMRASRRTTLTVNDISTALKALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 110
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L
Sbjct: 111 DFEKLINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQELVP----------- 159
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L +++ + H +S E LY++++ A + + R
Sbjct: 160 ---KGPGANPALAALAGNDSISFRPAVKHVVSKELILYFEKVQNAILDDNPDEEVVRLRH 216
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ DPGLH+++P F+A V + +++ L M + AL+ N LYL+ Y
Sbjct: 217 AALESVRDDPGLHQLIPYFINFVANQVTHRL--DDVFTLRQAMELTAALIANTKLYLDPY 274
Query: 362 LHELLPSILSCIVSKQLCGRPEAD---NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
+ + +L+CI+ +++ AD + LR+F++ LL Q+++ + S N ++ ++ R
Sbjct: 275 ANAIAAPVLTCILGRKIGAEDGADAMREQYQLREFSASLLGQIARKYAASNNLLRPKLVR 334
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP + +GAI G
Sbjct: 335 TCLKFFMDPDKPPATHFGAITG 356
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K +AES+GIPNL DDA + L+ ++ Y +
Sbjct: 14 DNVKDVAESVGIPNLHDDALRCLTQDVEYRIGQVLVEALRFMRASRRTTLTVNDISTALK 73
Query: 45 ---IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
I+P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 74 ALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 133
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 134 LAIEGVQPSIPQNPTTAESRSQEL 157
>gi|392566107|gb|EIW59283.1| transcription initiation factor TFIID complex subunit [Trametes
versicolor FP-101664 SS1]
Length = 487
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 168/321 (52%), Gaps = 49/321 (15%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDE 183
+ M H+KR L D+D AL + NIEP+YG T + LPF G ++F ++
Sbjct: 61 RFMRHAKRTTLTTADVDQALRVLNIEPLYGHFPYNPPTFRRALPFPQMPSAG-PVYFIED 119
Query: 184 KEVDFEDLLTNLN---PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS 240
+E++F+ L PK T HWLA+EGVQP +PENPP V + IDP S
Sbjct: 120 EEIEFDRALREEKVTLPKGVTWT---AHWLAVEGVQPLIPENPPAVPR------DIDPES 170
Query: 241 KLGKKDKDTSG-------------KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKE 287
K+ TS +P+ + K + + + VKQ+ + EL QLYY
Sbjct: 171 AAAKQGLSTSASGSIFPPTPPSSDRPSPIQASKQQPQQHIAVKQVLSREL----QLYYTR 226
Query: 288 ITEACV--GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN------NLAL 339
+T + + SD +R AL SL D GL +LP + ++ +GV V+ +++ + +
Sbjct: 227 LTSSLLPPSSDFAKRAAALASLRHDAGLSPLLPYLVRWVGQGV-VDALRSGSQNETDGKV 285
Query: 340 LIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLT 399
L L+ ++ ALLDNQ+L +E YLH+LLPSI S ++ L P H LR+ A+++L+
Sbjct: 286 LDVLLDVIGALLDNQTLGVEPYLHQLLPSIFSILLHSALP--PSHAAH--LRNTAAQILS 341
Query: 400 QVSKNFNTSTNNIQTRVTRLL 420
+ +++T+ + +R+ + L
Sbjct: 342 HLLTHYSTTYPGLSSRIVKTL 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 42/173 (24%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
+ +S++ +AES+ I NLPD A L+ ++ Y
Sbjct: 19 YKTDSVRDVAESLNITNLPDVVASALASDVEYRISQVVEEAARFMRHAKRTTLTTADVDQ 78
Query: 40 CCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN---PK 89
+V+ I+P+YG T + LPF G ++F +++E++F+ L PK
Sbjct: 79 ALRVLNIEPLYGHFPYNPPTFRRALPFPQMPSAG-PVYFIEDEEIEFDRALREEKVTLPK 137
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLP 142
T HWLA+EGVQP +PENPP V + + + + +S S + P
Sbjct: 138 GVTWT---AHWLAVEGVQPLIPENPPAVPRDIDPESAAAKQGLSTSASGSIFP 187
>gi|326426737|gb|EGD72307.1| hypothetical protein PTSG_00325 [Salpingoeca sp. ATCC 50818]
Length = 583
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 163/322 (50%), Gaps = 36/322 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD-- 187
K H +R ++ DI+ A+ ++N+EP+YG G E F KE D
Sbjct: 46 KFTRHGRRRRMTTDDINAAMRVRNMEPVYGYPSGSHT-------GTVESLFKRAKESDVF 98
Query: 188 -FEDLLTNLN-------PKSALETHLRTHWLAIEGVQPTVPENPP-PVDKSAQKLESIDP 238
D + ++ P E +HWLAIEG QPT+P+NPP +A+ E +P
Sbjct: 99 YIPDTVKRVHEIIGAPLPSMPAEMTFTSHWLAIEGEQPTIPQNPPVHTTHTAEPEEGQEP 158
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG 298
+K + KL++ + E V +KQL H LS EQQL + I + +G+D+
Sbjct: 159 AAK-------------APKLKEGKPREEVEIKQLEKHTLSREQQLLFNYIIKDLLGADKT 205
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
+ AL++L+TD GLH+++P FI + N + ++ MV AL+ N ++YL
Sbjct: 206 AKQAALKTLSTDHGLHQLVPFFMEFIRSQTTEHASDPN--AIASVVGMVDALVQNNNVYL 263
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
E YLH ++P + +C VSK+L A +H ALR A+++ + + T +++Q R+ +
Sbjct: 264 EPYLHHVIPVVATCAVSKKLASY--APDHLALRVRAAQVAVSICVKYGTKYHDLQPRILK 321
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
+ + + + + S YGAI G
Sbjct: 322 VFQDVLKR-RRSLLSYYGAIKG 342
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 32/140 (22%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLT--------------- 52
F E ++V+AE+ P + DD + L+ ++ Y + I Q T
Sbjct: 4 FPSEMVRVVAEAGRFPTITDDVCRVLAADLEYRIREIAQDAAKFTRHGRRRRMTTDDINA 63
Query: 53 ---VSQFLP-FKHASG---GGRELHFTDEKEVD---FEDLLTNLN-------PKSALETH 95
V P + + SG G E F KE D D + ++ P E
Sbjct: 64 AMRVRNMEPVYGYPSGSHTGTVESLFKRAKESDVFYIPDTVKRVHEIIGAPLPSMPAEMT 123
Query: 96 LRTHWLAIEGVQPTVPENPP 115
+HWLAIEG QPT+P+NPP
Sbjct: 124 FTSHWLAIEGEQPTIPQNPP 143
>gi|195109658|ref|XP_001999400.1| GI24488 [Drosophila mojavensis]
gi|193915994|gb|EDW14861.1| GI24488 [Drosophila mojavensis]
Length = 440
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 141/253 (55%), Gaps = 16/253 (6%)
Query: 200 ALETH------LRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKP 253
ALE H L ++ + + ++ P + PP+ KS+ S +K K++++ +P
Sbjct: 83 ALEEHNISLDLLHVNYASPDPIETDKPISKPPIKKSSLDRASRKD-AKRRKREREAPFEP 141
Query: 254 --TSAKLEKLRNV----ETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
++A LE+ RN E V + LS EQQ ++ ITEAC+G+ E R EAL SL
Sbjct: 142 YDSNAPLEE-RNRWLKREQVLLMSNKRFPLSKEQQEFFLVITEACMGNSEFARREALHSL 200
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
TD L ML R+ FI E VKVNV Q N ALLIYLMRMV+ +L N L L YLH L+P
Sbjct: 201 RTDSSLQPMLYRLSLFIGEAVKVNVAQKNFALLIYLMRMVQNVLFNPHLQLHNYLHLLVP 260
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
S+LSC VS+Q+C P NH A R++A+ ++ + + N+I RV + N +
Sbjct: 261 SVLSCAVSRQICAFPTVQNHCAAREYATNIMADFIRAYGYPGNDILPRVISVYKNGLKSS 320
Query: 428 KINFPSLYGAIAG 440
+ ++YG++ G
Sbjct: 321 IL--MTIYGSLVG 331
>gi|367024929|ref|XP_003661749.1| TAF6-like protein [Myceliophthora thermophila ATCC 42464]
gi|347009017|gb|AEO56504.1| TAF6-like protein [Myceliophthora thermophila ATCC 42464]
Length = 468
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 164/326 (50%), Gaps = 29/326 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M + R L D+ AL + ++EP+YG ++ L + AS G G+ L + D++EV
Sbjct: 50 SLRFMRAANRTTLTVQDVSLALKVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLAIEGVQP++P+NP + S+++L
Sbjct: 110 DFEKVINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAETSSKELLP----------- 158
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V + H +S E LY+ +I A + D R
Sbjct: 159 ---KGPGANPALAALAGNDNVSFRPSVKHVISKELILYFDKIQAAILDDDPDEEKTRLRE 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ +D GLH++LP FI V ++ ++L +L +M + +A++ N +L+L+ Y
Sbjct: 216 AALESVRSDSGLHQLLPYFVNFITNQVTHHL--DDLFILRQMMELAEAVIQNPNLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLCGRPEAD-------NHWALRDFASRLLTQVSKNFNTSTNNIQT 414
L IL+C++S++L G AD ++LR+ A+ LL V++ + + ++
Sbjct: 274 ASALSAPILTCLMSRRLGGAASADEGSDTLREQYSLRELAASLLEMVARKYGATNALLRP 333
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
++TR DP L+GAI G
Sbjct: 334 KLTRTCLKHFLDPTRPPAVLFGAIRG 359
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 36 NITYCCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
+++ KV+ ++P+YG ++ L + AS G G+ L + D++EVDFE ++ PK +
Sbjct: 66 DVSLALKVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEKVINAPLPKVPRD 125
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLAIEGVQP++P+NP + S+++L
Sbjct: 126 MSFTAHWLAIEGVQPSIPQNPTTAETSSKEL 156
>gi|207345395|gb|EDZ72230.1| YGL112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 432
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 38/315 (12%)
Query: 159 GLTVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQP 217
G V++ + F K + GG+ +++ DE+EVDF+ L+ P+ THWLA+EGVQP
Sbjct: 3 GSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQP 62
Query: 218 TVPENP---------PPVDKSA-------QKLESIDPISKLGKKDKDTSGKPTSAKLEKL 261
+ +NP PP + A L++ + DT S L +
Sbjct: 63 AIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGA---SQHLSNV 119
Query: 262 RNVETVHVKQLATHELSVEQQLYYKEITEACVG---SDEGRRF---EALQSLATDPGLHE 315
+ + VK L H LS E Q+Y+ ++ +DE + AL SL TD GLH+
Sbjct: 120 KPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQ 179
Query: 316 MLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVS 375
++P FIAE + N+ ++L LL ++ M+ +LL N S++L+ Y+H L+PSIL+ +++
Sbjct: 180 LVPYFIQFIAEQITQNL--SDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLA 237
Query: 376 KQLCGRPEADNHW----------ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
K+L G P+ D+ ALRDFA+ LL V K F + +++ RVTR L
Sbjct: 238 KKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFL 297
Query: 426 DPKINFPSLYGAIAG 440
D F + YG + G
Sbjct: 298 DINRVFGTYYGCLKG 312
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 50 GLTVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQP 108
G V++ + F K + GG+ +++ DE+EVDF+ L+ P+ THWLA+EGVQP
Sbjct: 3 GSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQP 62
Query: 109 TVPENP 114
+ +NP
Sbjct: 63 AIIQNP 68
>gi|340959744|gb|EGS20925.1| transcription initiation factor TFIID-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 480
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 167/335 (49%), Gaps = 38/335 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M + R L D+ AL + ++EP+YG ++ L + AS G G+ L + D++EV
Sbjct: 50 SLRFMRAANRTTLTVQDVSLALRVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLA+EGVQP++P+NP + S+ KD
Sbjct: 110 DFEKVINAPLPKVPRDMTFTAHWLAVEGVQPSIPQNPTTAETSS--------------KD 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V + H +S E LY+ +I A + D R
Sbjct: 156 LLPKGPGANPALAALAGNDNVSFRPSVKHVISKELILYFDKIQAAILDDDPDEEKMRLRQ 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ +DPGLH++LP FI V ++ ++L +L +M + +A++ N +L+++ Y
Sbjct: 216 AALESVRSDPGLHQLLPYFVNFITNQVTHHL--DDLFILRQMMELAEAVVQNPTLFIDPY 273
Query: 362 LHELLPSILSCIVSKQLCGRPEADN----------------HWALRDFASRLLTQVSKNF 405
L +L+C++S++L P +++ ++LR+ A+ LL+ +++ +
Sbjct: 274 ASALAAPVLTCLMSRKLGKNPSSNDEGALGAGNSIDSTLREQYSLRELAASLLSMIARKY 333
Query: 406 NTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
S ++ ++TR DP L+GAI+G
Sbjct: 334 GASNALLRPKLTRTCLKHFLDPTRPPAVLFGAISG 368
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 36 NITYCCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
+++ +V+ ++P+YG ++ L + AS G G+ L + D++EVDFE ++ PK +
Sbjct: 66 DVSLALRVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEKVINAPLPKVPRD 125
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLA+EGVQP++P+NP + S++ L
Sbjct: 126 MTFTAHWLAVEGVQPSIPQNPTTAETSSKDL 156
>gi|336473445|gb|EGO61605.1| hypothetical protein NEUTE1DRAFT_128140 [Neurospora tetrasperma
FGSC 2508]
gi|350293266|gb|EGZ74351.1| DUF1546-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 536
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D+ AL + ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 120 ALRFMRAANRTTLTVQDVSQALRVLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEV 179
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLAI+GVQP++P+NP + S++ L P
Sbjct: 180 DFEKVINAPLPKVPRDMSFTAHWLAIDGVQPSIPQNPTTAETSSKDLLPKGP-------- 231
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
P A L NV + H +S E LY+ ++ A + D R
Sbjct: 232 ---GANPAVAALAGNDNVA---FRPAVKHVISKELILYFDKVQAAIMDDDPDEEKTRLRS 285
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ +DPGLH+++P +FI V + ++L +L +M + A+LDN S++L+ Y
Sbjct: 286 AALDSVRSDPGLHQLVPYFVSFINNQVTHRL--DDLFVLRQMMELTGAILDNPSIFLDPY 343
Query: 362 LHELLPSILSCIVSKQLCGRPEA-------DNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
L +L+C+++++L G + + + LR+ A+ LL +++ ++ + ++
Sbjct: 344 ASSLAAPVLTCLMARKLGGSESSLEGTDALKDQYRLREVAASLLGTIARKYSKTNALLRP 403
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
++TR DP + LYGAI+G
Sbjct: 404 KLTRTCLKFFLDPSKSPAVLYGAISG 429
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 31/144 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++K +AESIGI NL ++ + L+ ++ Y +
Sbjct: 84 ENVKDVAESIGI-NLTEEPLRVLTQDVEYRIGQVVVEALRFMRAANRTTLTVQDVSQALR 142
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L + AS G G+ L + +++EVDFE ++ PK + HW
Sbjct: 143 VLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEKVINAPLPKVPRDMSFTAHW 202
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAI+GVQP++P+NP + S++ L
Sbjct: 203 LAIDGVQPSIPQNPTTAETSSKDL 226
>gi|85090715|ref|XP_958550.1| hypothetical protein NCU07757 [Neurospora crassa OR74A]
gi|28919921|gb|EAA29314.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 465
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D+ AL + ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 49 ALRFMRAANRTTLTVQDVSQALRVLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEV 108
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLAI+GVQP++P+NP + S+ KD
Sbjct: 109 DFEKVINAPLPKVPRDMSFTAHWLAIDGVQPSIPQNPTTAETSS--------------KD 154
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + + L + V + H +S E LY+ ++ A + D R
Sbjct: 155 LLPKGPGANPAVAALAGNDNVAFRPAVKHVISKELILYFDKVQAAIMDDDPDEEKTRLRS 214
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ +DPGLH+++P +FI V + ++L +L +M + A+LDN S++L+ Y
Sbjct: 215 AALDSVRSDPGLHQLVPYFVSFINNQVTHRL--DDLFVLRQMMELTGAILDNPSIFLDPY 272
Query: 362 LHELLPSILSCIVSKQLCGRPEA-------DNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
L +L+C+++++L G + + + LR+ A+ LL +++ ++ + ++
Sbjct: 273 ASSLAAPVLTCLMARKLGGSESSLEGTDALKDQYRLREVAASLLGTIARKYSKTNALLRP 332
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
++TR DP + LYGAI+G
Sbjct: 333 KLTRTCLKFFLDPSKSPAVLYGAISG 358
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 31/144 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++K +AESIGI NL ++ + L+ ++ Y +
Sbjct: 13 ENVKDVAESIGI-NLTEEPLRVLTQDVEYRIGQVVVEALRFMRAANRTTLTVQDVSQALR 71
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L + AS G G+ L + +++EVDFE ++ PK + HW
Sbjct: 72 VLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEKVINAPLPKVPRDMSFTAHW 131
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAI+GVQP++P+NP + S++ L
Sbjct: 132 LAIDGVQPSIPQNPTTAETSSKDL 155
>gi|345568553|gb|EGX51446.1| hypothetical protein AOL_s00054g145 [Arthrobotrys oligospora ATCC
24927]
Length = 450
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGG 175
V+ +++ + S + M S R L D++ A + +I+P G + L + A+ G G
Sbjct: 33 VEYRLRQIMAASIEVMKESGRTTLYTKDLEMAAKLLDIDPPLGYQSNLGLRWGEATLGAG 92
Query: 176 RELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 235
+ L + +++EVDFE ++ PK E + HW AIEGVQP VP NP P + +L
Sbjct: 93 QPLFYIEDEEVDFEKVINASLPKVPREVTMTAHWTAIEGVQPQVPMNPSPAEARMNELVP 152
Query: 236 IDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS 295
G T+ L N + VK A H LSVE Q+++ ++ + +
Sbjct: 153 --------------RGATTAHALGAAGNSDNATVKPAAKHILSVELQMFFDKVISSVIDY 198
Query: 296 D-EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQ 354
+ + R AL +L T+P +H++LP +++ E V + + ++ L+ +M + A++DN+
Sbjct: 199 EKDDLRSAALSALRTEPAIHQLLPYFVSYVTERVTHD-QKVDIKLMESMMDICDAMIDNE 257
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNH---WALRDFASRLLTQVSKNFNTSTNN 411
SL+++ Y+ +L P IL+C V K L P + + LR A +L +++ N+ S++
Sbjct: 258 SLFMDLYVEKLCPPILTCAVGKYLG--PNTQDQIPTFPLRRKAVSILRKLAINYGESSHT 315
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+++R+ R D K ++ S YG+I G
Sbjct: 316 LRSRLGRSFLKRFLDNKQSYGSHYGSILG 344
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 31/146 (21%)
Query: 9 SIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI------------------------ 44
SI++++ +ES+G+ L D+ A+ L+ ++ Y + I
Sbjct: 6 SIDTIRDNSESMGV-RLDDEVAQALASDVEYRLRQIMAASIEVMKESGRTTLYTKDLEMA 64
Query: 45 -----IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
I P G + L + A+ G G+ L + +++EVDFE ++ PK E +
Sbjct: 65 AKLLDIDPPLGYQSNLGLRWGEATLGAGQPLFYIEDEEVDFEKVINASLPKVPREVTMTA 124
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKL 124
HW AIEGVQP VP NP P + +L
Sbjct: 125 HWTAIEGVQPQVPMNPSPAEARMNEL 150
>gi|195501972|ref|XP_002098025.1| GE24166 [Drosophila yakuba]
gi|194184126|gb|EDW97737.1| GE24166 [Drosophila yakuba]
Length = 557
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
VE V + + L+ EQQ +++ +TEACVG+ + RR ALQ+L TDP + +LP + F
Sbjct: 143 VERVLLSSCKRYPLTKEQQSFFELVTEACVGTSDSRRQRALQTLTTDPSIEVLLPTLTMF 202
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE 383
IA+ V +NV Q ++A+L YLMRM+++LL N L +YLH LLP++LSC+++KQ+C P+
Sbjct: 203 IADAVAINVKQQDMAMLFYLMRMIRSLLGNHRFSLLQYLHLLLPAVLSCVLAKQVCASPD 262
Query: 384 ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGL 443
+D+HWALR+++ ++ + + F+ + +I RV + A+ + +++GA+ G G
Sbjct: 263 SDDHWALREYSGNIMGHIGRQFDAADTSILPRVIGVYKKALLMKPLT--TVFGAVIGLGK 320
Query: 444 VTERS 448
+ R+
Sbjct: 321 LGNRA 325
>gi|367037809|ref|XP_003649285.1| TAF6-like protein [Thielavia terrestris NRRL 8126]
gi|346996546|gb|AEO62949.1| TAF6-like protein [Thielavia terrestris NRRL 8126]
Length = 468
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 28/325 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D+ AL + +EP+YG ++ L + AS G G+ L + D++E+
Sbjct: 50 ALRFMRAANRTTLTVQDVSLALRVLKVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEI 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLA+EGVQP++P+NP + S+ KD
Sbjct: 110 DFEKVINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAETSS--------------KD 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V + H +S E LY+ +I A + D R
Sbjct: 156 LLPKGPGANPALAALAGNDNVSFRPSVKHVISKELILYFDKIQAAILDDDPDEEKTRLRE 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL+S+ +DPGLH++LP FI V ++ ++L +L +M + +A++ N SL+L+ Y
Sbjct: 216 AALESVRSDPGLHQLLPYFVNFITNQVTHHL--DDLFVLRQMMELAEAVIQNPSLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLCGRPEADN------HWALRDFASRLLTQVSKNFNTSTNNIQTR 415
L +L+C+++++L G + + LR+ A+ LL +++ + S ++ +
Sbjct: 274 ASALSAPVLTCLMARKLGGAAPDEGGDALREQYRLRELAASLLEMIARKYGASNALLRPK 333
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
+TR DP L+GAI G
Sbjct: 334 LTRTCLKHFLDPTRPPAVLFGAIRG 358
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 13/136 (9%)
Query: 2 DIYGTSFSIESMKVIAESI--GIPNLPDDAAKELS---------DNITYCCKVI-IQPIY 49
D G + S E ++V+A+ + I L +A + + +++ +V+ ++P+Y
Sbjct: 21 DSQGITLSEEPLRVLAQDVEYRIGQLIVEALRFMRAANRTTLTVQDVSLALRVLKVEPLY 80
Query: 50 GLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQP 108
G ++ L + AS G G+ L + D++E+DFE ++ PK + HWLA+EGVQP
Sbjct: 81 GYESTRPLRYGEASLGPGQPLFYIDDEEIDFEKVINAPLPKVPRDMSFTAHWLAVEGVQP 140
Query: 109 TVPENPPPVDKSAQKL 124
++P+NP + S++ L
Sbjct: 141 SIPQNPTTAETSSKDL 156
>gi|46132948|ref|XP_389187.1| hypothetical protein FG09011.1 [Gibberella zeae PH-1]
Length = 463
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 161/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M S+R L DI AL ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 50 ALRFMRASRRTTLTVNDISLALRALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L
Sbjct: 110 DFEKLINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQELLP----------- 158
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V +K H +S E LY+ +I A + + R
Sbjct: 159 ---KGPGANPALSALAGNDNVSMKPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQ 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P TFI + V ++ ++ L +M + AL++N+SL+L+ Y
Sbjct: 216 AALGSVRDDPGLHQLIPYFITFIMDRVTHHL--DDTFTLKQMMELTNALIENKSLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L L+C+++++L G + LR A+ L+ Q+++ ++ S ++ ++TR
Sbjct: 274 ASPLSAPALTCLMARKLGTEDGTDALKEQYELRQLAASLVGQIARKYSASNTLLRPKLTR 333
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGAI G
Sbjct: 334 TCLKYFLDPTKPPAVLYGAIHG 355
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII------------------------- 45
+++K +AES+GI +L ++A K L+ ++ Y +I
Sbjct: 13 DNVKDVAESVGISSLNEEALKCLTQDVEYRVGQVIVEALRFMRASRRTTLTVNDISLALR 72
Query: 46 ----QPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
+P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 73 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 132
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 133 LAIEGVQPSIPQNPTTSESRSQEL 156
>gi|408393425|gb|EKJ72689.1| hypothetical protein FPSE_07089 [Fusarium pseudograminearum CS3096]
Length = 463
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 161/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M S+R L DI AL ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 50 ALRFMRASRRTTLTVNDISLALRALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L
Sbjct: 110 DFEKLINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQELLP----------- 158
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V +K H +S E LY+ +I A + + R
Sbjct: 159 ---KGPGANPALSALAGNDNVSMKPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQ 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P TFI + V ++ ++ L +M + AL++N+SL+L+ Y
Sbjct: 216 AALGSVRDDPGLHQLIPYFITFIMDRVTHHL--DDTFTLKQMMELTNALIENKSLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLCGRPEAD---NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L L+C+++++L D + LR A+ L+ Q+++ ++ S ++ ++TR
Sbjct: 274 ASPLSAPALTCLMARKLGTEDGTDALKEQYDLRQLAASLVGQIARKYSASNTLLRPKLTR 333
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGAI G
Sbjct: 334 TCLKYFLDPTKPPAVLYGAIHG 355
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII------------------------- 45
+++K +AES+GI +L ++A K L+ ++ Y +I
Sbjct: 13 DNVKDVAESVGISSLNEEALKCLTQDVEYRVGQVIVEALRFMRASRRTTLTVNDISLALR 72
Query: 46 ----QPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
+P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 73 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 132
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 133 LAIEGVQPSIPQNPTTSESRSQEL 156
>gi|302896134|ref|XP_003046947.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727875|gb|EEU41234.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 462
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 163/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M ++R L DI AL ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 49 SLRFMRAARRTTLTVNDISLALRALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 108
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L L K
Sbjct: 109 DFEKLINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQEL--------LPK-- 158
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V +K H +S E LY+ +I A + + R
Sbjct: 159 ----GPGANPALSALAGNDNVAMKPSVKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQ 214
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P FI + V ++ ++ L +M + AL++N+SL+L+ Y
Sbjct: 215 AALGSVRDDPGLHQLIPYFINFIMDRVTHHL--DDTFTLKQMMELTNALIENKSLFLDPY 272
Query: 362 LHELLPSILSCIVSKQLCGRPEAD---NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L L+C+++++L D + LR A+ L+ Q+++ ++ S ++T++TR
Sbjct: 273 ASPLSAPALTCLMARKLGADEGVDAIKEQYDLRQLAASLVGQIARKYSASNTLLRTKLTR 332
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGAI G
Sbjct: 333 TCLKYFLDPTKPPAVLYGAIHG 354
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII------------------------- 45
E++K +AES+GI +L D+A K L+ ++ Y +I
Sbjct: 12 ENVKDVAESVGISSLNDEALKCLTQDVEYRIGQVIVESLRFMRAARRTTLTVNDISLALR 71
Query: 46 ----QPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
+P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 72 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 131
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 132 LAIEGVQPSIPQNPTTSESRSQEL 155
>gi|322703194|gb|EFY94807.1| transcription initiation factor TFIID complex 60 kDa subunit
[Metarhizium anisopliae ARSEF 23]
Length = 465
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 164/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R L D+ AL + ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 52 ALRLMRAARRTTLTVNDVSLALKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 111
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + + HWLAIEGVQP++P+NP + +Q+L
Sbjct: 112 DFEKLINAPLPKVPRDMNFTAHWLAIEGVQPSIPQNPTTAESRSQELLP----------- 160
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V VK H +S E LY+ +I A + + R
Sbjct: 161 ---KGPGANPALAALAGNDNVAVKPSVKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQ 217
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P FI + V ++ ++ L ++M + AL++N+SL+L+ Y
Sbjct: 218 AALGSVRDDPGLHQLVPYFINFIMDRVTHHL--DDTFTLRHMMELTNALIENKSLFLDPY 275
Query: 362 LHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L L+C+++++L G + + LR A+ L+ ++++ ++ S ++ ++TR
Sbjct: 276 ASSLSAPALTCLMARKLGTDDGVDAMKDQYDLRQLAASLVGRIARKYSASNTLLRPKLTR 335
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGAI G
Sbjct: 336 TCLKYFLDPTKPPAVLYGAIYG 357
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +AES+GI +L D+A K L+ ++ Y K
Sbjct: 15 DNVKDVAESVGISSLNDEALKALTQDVEYRIGQVIIEALRLMRAARRTTLTVNDVSLALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + + HW
Sbjct: 75 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMNFTAHW 134
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 135 LAIEGVQPSIPQNPTTAESRSQEL 158
>gi|336264219|ref|XP_003346888.1| hypothetical protein SMAC_05148 [Sordaria macrospora k-hell]
gi|380090359|emb|CCC11935.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 516
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D+ AL + ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 49 ALRFMRAANRTTLTVQDVSQALRVLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEV 108
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLAI+GVQP++P+NP + S+ KD
Sbjct: 109 DFEKVINAPLPKVPRDMSFTAHWLAIDGVQPSIPQNPTTGETSS--------------KD 154
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + + L + V + H +S E LY+ ++ A + D R
Sbjct: 155 LLPKGPGANPAVAALAGNDNVAFRPAVKHVISKELILYFDKVQAAILDDDPDEEKTRLRS 214
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ +DPGLH+++P +FI V + ++L +L +M + A+L+N S++L+ Y
Sbjct: 215 AALDSVRSDPGLHQLVPYFVSFINNQVTHRL--DDLFVLRQMMELTGAILENPSIFLDPY 272
Query: 362 LHELLPSILSCIVSKQLCGRPEA-------DNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
L +L+C+++++L G + + + LR+ A+ LL +++ ++ + ++
Sbjct: 273 ASSLAAPVLTCLMARKLGGSESSLEGTDALKDQYRLREVAASLLGTIARKYSKTNALLRP 332
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
++TR DP + LYGAI+G
Sbjct: 333 KLTRTCLKFFLDPSKSPAVLYGAISG 358
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 31/144 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++K +AESIGI NL ++ + L+ ++ Y +
Sbjct: 13 ENVKDVAESIGI-NLTEEPLRVLTQDVEYRIGQVVVEALRFMRAANRTTLTVQDVSQALR 71
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L + AS G G+ L + +++EVDFE ++ PK + HW
Sbjct: 72 VLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEKVINAPLPKVPRDMSFTAHW 131
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAI+GVQP++P+NP + S++ L
Sbjct: 132 LAIDGVQPSIPQNPTTGETSSKDL 155
>gi|342872127|gb|EGU74524.1| hypothetical protein FOXB_14969 [Fusarium oxysporum Fo5176]
Length = 463
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 163/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M ++R L DI AL ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 50 SLRFMRAARRTTLTVNDISLALKALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLAIEGVQP++P+NP + +Q+L L K
Sbjct: 110 DFEKLINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQEL--------LPK-- 159
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V +K H +S E LY+ +I A + + R
Sbjct: 160 ----GPGANPALSALAGNDNVSMKPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQ 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P TFI + V ++ ++ L +M + AL++N+SL+L+ Y
Sbjct: 216 AALGSVRDDPGLHQLIPYFITFIMDRVTHHL--DDTFTLKQMMELTNALIENKSLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L L+C+++++L G + LR A+ L+ ++++ ++ S ++ ++TR
Sbjct: 274 ASPLSAPALTCLMARKLGTDEGTDALKEQYDLRQLAASLVGRIARKYSASNTLLRPKLTR 333
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGAI G
Sbjct: 334 TCLKYFLDPTKPPAVLYGAIHG 355
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII------------------------- 45
+++K +AES+GI +L ++A K L+ ++ Y +I
Sbjct: 13 DNVKDVAESVGISSLNEEALKCLTQDVEYRVGQVIVESLRFMRAARRTTLTVNDISLALK 72
Query: 46 ----QPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
+P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + HW
Sbjct: 73 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 132
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + +Q+L
Sbjct: 133 LAIEGVQPSIPQNPTTSESRSQEL 156
>gi|194746737|ref|XP_001955833.1| GF16042 [Drosophila ananassae]
gi|190628870|gb|EDV44394.1| GF16042 [Drosophila ananassae]
Length = 539
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Query: 265 ETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFI 324
E V +K + L+ EQQ +Y+ ITE VG E RR AL +++ DP + +LPR+ FI
Sbjct: 151 EQVLLKPYQRYPLTREQQCFYEMITENSVGLSESRRHRALHTMSLDPSVEVLLPRLSRFI 210
Query: 325 AEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEA 384
A+ VN+VQ N+ +L+Y MRMV+ALL N + L KYLH +LP++LSC+++K+L E
Sbjct: 211 ADSTAVNIVQRNMPMLLYTMRMVRALLGNSRISLYKYLHLILPAVLSCLLAKELSRGSE- 269
Query: 385 DNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
HWALR+++ ++ ++ ++F ++ ++I +RV + A+ + +++GA+ G G
Sbjct: 270 -EHWALREYSGNIMAEIVRHFKSTDSSILSRVVSIYKQALTMKPLT--TVFGAVIGFG 324
>gi|395330883|gb|EJF63265.1| TAF-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 481
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 172/345 (49%), Gaps = 31/345 (8%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKH 170
V+ Q++ + + M H+KR L DID AL + NIEP+YG + LPF
Sbjct: 48 VEYRIQQVVEEAARFMRHAKRTTLTTADIDQALRVLNIEPLYGHFPHNPPAFRRALPFPQ 107
Query: 171 ASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPV---- 226
G ++F +++E++F+ ++ HWLA+EGVQP +PENPP
Sbjct: 108 MQTAG-SVYFVEDEEIEFDRVIREEKISMPKGVSWTAHWLAVEGVQPLIPENPPAAPREI 166
Query: 227 --DKSAQKLESIDPIS-KLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
D +A K + + +S + +S +P+ + K + + VKQ LS E QL
Sbjct: 167 DPDSAAAKTGTANGVSGSVFPLTPPSSDRPSPIQSSKQTQQQNILVKQ----TLSRELQL 222
Query: 284 YYKEITEACV--GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVV------QN 335
YY +T + + SD +R AL SL D GL +L + ++ EGV VN + +
Sbjct: 223 YYTRLTSSLLPPTSDPAKRTAALASLRHDAGLSPLLSYLVHWVGEGV-VNTLRGGSQTET 281
Query: 336 NLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFAS 395
+ LL + ++ ALLDNQ+L +E YLH++LPS+ S ++ L N LR A+
Sbjct: 282 DGKLLEVYLDVIAALLDNQTLGVEPYLHQILPSVFSILLYSSL----PPSNAIHLRTTAA 337
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
++L + +++ + + T++ + L + D K + + GAI G
Sbjct: 338 QILAHLLTHYSMTYPGLPTKIVKTLIVGLIDNKKSRATHEGAIRG 382
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 36/143 (25%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI----------------------- 44
+ ++S++ +AES+ +PNLPD A L+ ++ Y + +
Sbjct: 19 YKVDSVRDVAESLNLPNLPDAVASALASDVEYRIQQVVEEAARFMRHAKRTTLTTADIDQ 78
Query: 45 ------IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
I+P+YG + LPF G ++F +++E++F+ ++
Sbjct: 79 ALRVLNIEPLYGHFPHNPPAFRRALPFPQMQTAG-SVYFVEDEEIEFDRVIREEKISMPK 137
Query: 93 ETHLRTHWLAIEGVQPTVPENPP 115
HWLA+EGVQP +PENPP
Sbjct: 138 GVSWTAHWLAVEGVQPLIPENPP 160
>gi|393213433|gb|EJC98929.1| TAF-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 484
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 166/329 (50%), Gaps = 33/329 (10%)
Query: 134 HSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVD 187
H++R + DID AL + NIEP+YG T + LPF A G ++F +++E+D
Sbjct: 62 HARRTTMTTSDIDQALRVLNIEPLYGHAPHNPPTFRRALPFPSAPTAG-PVYFVEDEEID 120
Query: 188 FEDLLTNLN---PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
F+ +L PK A T HWLA+EGVQP VPENPP ++ + E +KL
Sbjct: 121 FDRVLREEKITLPKPASYT---AHWLAVEGVQPNVPENPPAAER--RDAEPDIASAKLST 175
Query: 245 KDKD-TSGKPTSAKLEKLRNVETVHVKQLATHE-LSVEQQLYYKEITEACV------GSD 296
++ T PT + + + QL + LS E QLYY +T + +D
Sbjct: 176 PPRNGTQFPPTPPSPSRNASFNSTKPNQLLVKQVLSRELQLYYTRLTSTLMPPTLMPPAD 235
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGV-----KVNVVQNNLALLIYLMRMVKALL 351
+ R+ AL SL D GL +LP + ++ +GV N +N+ L + ++ ALL
Sbjct: 236 DTRKAAALSSLRNDAGLQTLLPYLVKWVGDGVIAILRDTNHSENDGRALEVYLEVIGALL 295
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
DN +L++E YLH++LP +LS ++ L P H LR AS+ L+ + +T+ +
Sbjct: 296 DNSTLFVEPYLHQMLPPLLSILLHTSL---PSNSTH--LRIMASQTLSHLLTQHSTTYPS 350
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ R+ + L A+ P + + GA+ G
Sbjct: 351 LSPRIMKTLLLALLSPGKSKGTREGAVRG 379
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 42/150 (28%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
+ ES+K +AES GI NL + A L+ ++ Y
Sbjct: 16 YKSESIKDVAESFGISNLSEAIASALASDVEYRMHQVIEEAARFTRHARRTTMTTSDIDQ 75
Query: 40 CCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN---PK 89
+V+ I+P+YG T + LPF A G ++F +++E+DF+ +L PK
Sbjct: 76 ALRVLNIEPLYGHAPHNPPTFRRALPFPSAPTAG-PVYFVEDEEIDFDRVLREEKITLPK 134
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDK 119
A T HWLA+EGVQP VPENPP ++
Sbjct: 135 PASYT---AHWLAVEGVQPNVPENPPAAER 161
>gi|388578780|gb|EIM19117.1| TAF-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 464
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 21/302 (6%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLP-FKHASGGGRELHFTDEKEVDF 188
K M HSKR LLP DI++AL + NIEP+Y + +P ++ + + ++KE+DF
Sbjct: 56 KFMKHSKRTALLPCDIENALKVLNIEPLYSPHPATSIPTYRRVATPAGPVFALEDKEIDF 115
Query: 189 EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKD 248
E L P+ + +HWLAIEGVQP +P+NP P D P+ +L
Sbjct: 116 EKALREPLPRLSKGPSYTSHWLAIEGVQPLIPQNPAPTDNG--------PMHQLAPAQAA 167
Query: 249 TSGKPTSAKLEKLRNVETVH--VKQLATHELSVEQQLYYKEITEACVGSDEG---RRFEA 303
+ + T+H VK L +HEL QLYY +T A + R A
Sbjct: 168 LNNNNNNGAGVGGTASTTIHPPVKHLLSHEL----QLYYIRLTSALLSPATNVPEAREAA 223
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L SL DPGL ++P + F E V N+ +NL ++ ++ +V +L+DNQ+L++E YLH
Sbjct: 224 LASLRGDPGLGGLVPYLVRFAGEKVSTNL--SNLDIIDAMVGVVHSLIDNQTLFIEPYLH 281
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
++LP +L+ +++ P+ W LR ++ L+ ++ +++ S + RV + L A
Sbjct: 282 QILPLLLTTLLTSSYPAPPDQKALW-LRQKSASLIARLLNDYSNSYPTLSGRVAKTLFKA 340
Query: 424 IN 425
++
Sbjct: 341 LS 342
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 2 DIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------- 39
+I + E ++ +AES+GI L D A L+ ++ Y
Sbjct: 8 EIQAGIYPTEVIRDVAESVGITGLTDTVATGLAGDVEYRITLLIEEASKFMKHSKRTALL 67
Query: 40 ------CCKVI-IQPIYGLTVSQFLP-FKHASGGGRELHFTDEKEVDFEDLLTNLNPKSA 91
KV+ I+P+Y + +P ++ + + ++KE+DFE L P+ +
Sbjct: 68 PCDIENALKVLNIEPLYSPHPATSIPTYRRVATPAGPVFALEDKEIDFEKALREPLPRLS 127
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVD 118
+HWLAIEGVQP +P+NP P D
Sbjct: 128 KGPSYTSHWLAIEGVQPLIPQNPAPTD 154
>gi|299743831|ref|XP_001836008.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coprinopsis cinerea okayama7#130]
gi|298405837|gb|EAU85784.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coprinopsis cinerea okayama7#130]
Length = 485
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 176/339 (51%), Gaps = 40/339 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDE 183
+ M H +R + DID+AL + NIEP+YG T + LP+ G ++F ++
Sbjct: 60 RFMRHGRRTTMTTSDIDNALRVLNIEPLYGHTPYNTATFRRALPYPQTQNAG-PVYFVED 118
Query: 184 KEVDFEDLLTNLN---PKSALETHLRTHWLAIEGVQPTVPENPPPV------DKSAQKLE 234
+E+DF+ +L PK T HWLA+EGVQP +PENPP + + A +
Sbjct: 119 EEIDFDRVLREEKITLPKGVTWT---AHWLAVEGVQPLIPENPPAIPREVAPEAGAAAPD 175
Query: 235 SIDPISKLGKKDKDTSG------KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEI 288
+ + KK+ +G P +A + + + VKQ+ + EL QLYY +
Sbjct: 176 GVGLPTLAAKKEPQINGGGLLGNTPAAANSKLTQQQQQQLVKQVLSREL----QLYYARL 231
Query: 289 TEACV--GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV-----VQNNLALLI 341
T A + SD +R AL SL +D GL +LP + ++AEGV + +N+ +L
Sbjct: 232 TTALLPPTSDFAKRTAALASLRSDAGLQALLPYLVRWVAEGVVGALKDGTQTENDGKVLE 291
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
LM +V A+L+N++L++E YLH+LLP ILS ++ L P + + LR A++ L+++
Sbjct: 292 VLMDVVSAILENKTLFVEPYLHQLLPPILSTLLHSSL---PHSHST-QLRTSAAQTLSRL 347
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+T+ ++ R+ + L A+ P + + GA+ G
Sbjct: 348 LTQHSTTYPSLSPRIMKTLLLALISPGKSKGTREGAVRG 386
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 34 SDNITYCCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNL 86
+ +I +V+ I+P+YG T + LP+ G ++F +++E+DF+ +L
Sbjct: 72 TSDIDNALRVLNIEPLYGHTPYNTATFRRALPYPQTQNAG-PVYFVEDEEIDFDRVLREE 130
Query: 87 N---PKSALETHLRTHWLAIEGVQPTVPENPPPVDK 119
PK T HWLA+EGVQP +PENPP + +
Sbjct: 131 KITLPKGVTWT---AHWLAVEGVQPLIPENPPAIPR 163
>gi|356567236|ref|XP_003551827.1| PREDICTED: uncharacterized protein LOC100803416 [Glycine max]
Length = 440
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 4/177 (2%)
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDPGLHEMLPRMCTFIA 325
V +K H LS E QLY+ ++ E + E F EAL SLATD GLH ++P FIA
Sbjct: 61 VDIKLPVKHVLSRELQLYFDKVAELTLSESESVLFKEALVSLATDSGLHPLVPYFTCFIA 120
Query: 326 EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD 385
+ V + NN LL LMR+V +LL N +++E YLH+L+PS+++C+V+K+L R AD
Sbjct: 121 DEVSRGL--NNYPLLFALMRVVSSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGSR-LAD 177
Query: 386 NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
NHW LRD + L+ + K F +N+Q+R+T+ L NA DPK YGAI G G
Sbjct: 178 NHWELRDSTANLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLG 234
>gi|195451123|ref|XP_002072777.1| GK13782 [Drosophila willistoni]
gi|194168862|gb|EDW83763.1| GK13782 [Drosophila willistoni]
Length = 469
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 111/166 (66%), Gaps = 4/166 (2%)
Query: 277 LSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
LS EQ YK IT A +G E +R ALQ+L DP L+++LP +C FI+ V VNVV+ N
Sbjct: 60 LSREQLGLYKLITAASLGKSENKRRRALQTLTNDPALNDLLPALCLFISNAVNVNVVKLN 119
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASR 396
++ L+YLMRMV+AL+ N SL L++ LH+L+P++L+C++++Q P +HWALR+++
Sbjct: 120 MSKLLYLMRMVRALVANSSLCLQRCLHQLIPAVLTCLLTRQ--DDPFPADHWALREYSGN 177
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
++ ++ +F+ +N I RV + + A+ K+ ++YGA+ G G
Sbjct: 178 IIAEIVWHFDNPSNGILPRVIGIYNQALQ--KLPLTTVYGAVIGLG 221
>gi|167391320|ref|XP_001739722.1| transcription initiation factor tfiid [Entamoeba dispar SAW760]
gi|165896481|gb|EDR23886.1| transcription initiation factor tfiid, putative [Entamoeba dispar
SAW760]
Length = 433
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 45/317 (14%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS-----QFLPFKHASGGGRELHFTDEK 184
K M HSKR L DI+ AL +K +EP YG S Q LP H E+ E+
Sbjct: 48 KFMRHSKRKMLTIQDINSALKLKKLEPYYGYNSSIPLYYQRLPSNH------EMFVRQEQ 101
Query: 185 EVDFEDLL-TNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG 243
+ +++ P + ++ HWL +EGVQP +P+NP V + QK E
Sbjct: 102 SIGLNEIIHCQFFPDIPRDINVGCHWLTVEGVQPLIPQNPSVVVQEKQKQE--------- 152
Query: 244 KKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
ET+ K + H LS E Q+YY + E +++ + E
Sbjct: 153 ---------------------ETIETKPIIQHSLSKELQMYYDMVVEILNTNNKEKIDEC 191
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L S+ TD GL ++ P +I+ N+ +L +L ++ +V A+ +NQ++ LE YLH
Sbjct: 192 LDSVRTDSGLQQLTPYFIRYISNHTLANL--GSLEILANMLSLVNAMRENQNINLEPYLH 249
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+L P IL+ +V+KQ+ G DNHW +R A+ ++ ++ ++ + R+ + A
Sbjct: 250 QLFPIILTLVVTKQI-GTNSYDNHWNIRVQAAAIVKKLRDRYSEKYGRLHARLLQTYLQA 308
Query: 424 INDPKINFPSLYGAIAG 440
I D + YG I G
Sbjct: 309 ITDATKPLTTQYGGIVG 325
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 45 IQPIYGLTVS-----QFLPFKHASGGGRELHFTDEKEVDFEDLL-TNLNPKSALETHLRT 98
++P YG S Q LP H E+ E+ + +++ P + ++
Sbjct: 72 LEPYYGYNSSIPLYYQRLPSNH------EMFVRQEQSIGLNEIIHCQFFPDIPRDINVGC 125
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKL-ESISFKCM---SHSKRVKLLPVDIDDALNMKNI 154
HWL +EGVQP +P+NP V + QK E+I K + S SK +++ + + LN N
Sbjct: 126 HWLTVEGVQPLIPQNPSVVVQEKQKQEETIETKPIIQHSLSKELQMYYDMVVEILNTNNK 185
Query: 155 EPI 157
E I
Sbjct: 186 EKI 188
>gi|358056098|dbj|GAA97952.1| hypothetical protein E5Q_04632 [Mixia osmundae IAM 14324]
Length = 511
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M H+KR KL DID AL +N+EP+YG + L F+ + +++ +++E+D
Sbjct: 52 SLKFMRHAKRTKLRVDDIDYALKARNVEPLYGFRTNTPLAFRKTTTATGTVYYVEDEEID 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
+L P + + HWLAIEGVQP +P+NP P + A + + + +
Sbjct: 112 LNRILHAQLPPAPRDVSYTAHWLAIEGVQPAIPQNPSPAEIRALQTPHLHANAFGSRAGG 171
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEGRRFEALQS 306
S P K+ V+ L H LS E QLY++ + A SDE R AL S
Sbjct: 172 FASQAP------KVPTANPDDVRPLVKHVLSRELQLYFERLVAAATSESDETMREAALAS 225
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L D G+ ++P + + E + N+ +L LL + ++ AL+DN +L++E YLH++
Sbjct: 226 LRGDTGIGPLVPYLVQWSVEKIAHNL--RDLVLLDQTLSVIHALIDNPNLFIEPYLHQIF 283
Query: 367 PSILSCIVSKQLCGRPEADNHWA-------LRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
P++L+ +++ L G A A LR A LL + + + ++ R+ R
Sbjct: 284 PAVLTPLLTTVL-GDGSAVAFGAAQLHSTDLRQHAGSLLRLIMDRYAHAYPALKPRILRA 342
Query: 420 LSNAINDPKINFPSLYGAIAGEGLVTER 447
L A+ + + PS EG ++ER
Sbjct: 343 LVRALTELPM-LPS-----TAEGELSER 364
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELS----------------------------DNITYCCK 42
+S+K +AES GI NL D+ A L+ D+I Y K
Sbjct: 15 DSVKDVAESCGIANLSDEVAAALATDVEYRLHELVEESLKFMRHAKRTKLRVDDIDYALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
++P+YG + L F+ + +++ +++E+D +L P + + HWL
Sbjct: 75 ARNVEPLYGFRTNTPLAFRKTTTATGTVYYVEDEEIDLNRILHAQLPPAPRDVSYTAHWL 134
Query: 102 AIEGVQPTVPENPPPVDKSA 121
AIEGVQP +P+NP P + A
Sbjct: 135 AIEGVQPAIPQNPSPAEIRA 154
>gi|393242954|gb|EJD50470.1| TAF-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 504
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS---GGGRELHFTDEKEV 186
+ M HS+R L DID AL + NIEP+YG PF+ A G ++F ++ E+
Sbjct: 60 RFMRHSRRTTLTTGDIDQALRVLNIEPLYGHNTHTHPPFRRAHVMVPGQAPVYFVEDTEI 119
Query: 187 DFEDLLTN---LNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG 243
DF+ +L PK T HWLA+EGVQP +PENPP K ++ I+K+
Sbjct: 120 DFDKVLHEEKVFLPKPVTWT---AHWLAVEGVQPMIPENPP-----QAKTDAASGIAKV- 170
Query: 244 KKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV-GSDEGRRFE 302
PT+A+ + H LS E QLYY +T + + SD +R
Sbjct: 171 ------PAAPTAARKTGTGAAAKKAAAR---HVLSRELQLYYNRLTTSLLPPSDSSKRTA 221
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGV------KVNVVQNNLALLIYLMRMVKALLDNQSL 356
AL SL D GL +LP + ++ E V + +N L ++ ++ ALLDN +L
Sbjct: 222 ALASLRMDAGLQALLPYLVRWVGERVVHCLKSPGSTEADNGRTLEVMLDVLHALLDNAAL 281
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
++E YLH++LP +LS +++ L P A R A++++ ++ +T+ ++ R+
Sbjct: 282 FVEPYLHQMLPPVLSALLTSSL---PANSRSSATRAHAAQIVARLLTTHSTTYPSLAPRL 338
Query: 417 TRLLSNAI 424
T+ L A+
Sbjct: 339 TKTLLVAL 346
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 38/143 (26%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI----------------------- 44
F E+++ IAE++GI LPD A L+ ++ Y I
Sbjct: 18 FKPEAIRDIAEAMGISTLPDGVASALASDVEYRIHQIVEEAARFMRHSRRTTLTTGDIDQ 77
Query: 45 ------IQPIYGLTVSQFLPFKHAS---GGGRELHFTDEKEVDFEDLLTN---LNPKSAL 92
I+P+YG PF+ A G ++F ++ E+DF+ +L PK
Sbjct: 78 ALRVLNIEPLYGHNTHTHPPFRRAHVMVPGQAPVYFVEDTEIDFDKVLHEEKVFLPKPVT 137
Query: 93 ETHLRTHWLAIEGVQPTVPENPP 115
T HWLA+EGVQP +PENPP
Sbjct: 138 WT---AHWLAVEGVQPMIPENPP 157
>gi|358388344|gb|EHK25937.1| hypothetical protein TRIVIDRAFT_63275 [Trichoderma virens Gv29-8]
Length = 468
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 35/327 (10%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R + D+ AL + + EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 50 ALRLMRAARRTTMTVNDVSMALKVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP-----ISK 241
DFE L+ P+ + + HWLAIEGVQP++P+NP + Q L P +S
Sbjct: 110 DFEKLINAPLPRVPRDMNFTAHWLAIEGVQPSIPQNPTSAELRPQDLLPKGPGANPALSA 169
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-- 299
L D SG+P+ VK + + EL LY+ +I A + +
Sbjct: 170 LAGNDA-ASGQPS--------------VKHIVSKELI----LYFDKIQAAILDDNPDEEV 210
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
R AL S+ DPGLH+++P FI + V + ++ L +M + AL++N+SL
Sbjct: 211 IRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHQL--DDTFTLKQMMELTNALIENKSL 268
Query: 357 YLEKYLHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+L+ Y L +L+C+++++L G+ + LR A+ LL ++++ ++ S + ++
Sbjct: 269 FLDPYASSLSAPVLTCLMARKLGTEDGQDSLKEQYDLRQLAASLLGRIARKYSASNSLLR 328
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
++TR DP LYGAI G
Sbjct: 329 PKLTRTCLKYFLDPTKPPAVLYGAIHG 355
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY-CCKVIIQ-------------------- 46
++ E++K +AES+GI ++ D+A K L+ ++ Y +VII+
Sbjct: 10 WNTENVKDVAESVGIGSMSDEALKALTQDVEYRIGQVIIEALRLMRAARRTTMTVNDVSM 69
Query: 47 --------PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG ++ L + AS G G+ L + +++EVDFE L+ P+ + +
Sbjct: 70 ALKVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPRVPRDMNFT 129
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLAIEGVQP++P+NP + Q L
Sbjct: 130 AHWLAIEGVQPSIPQNPTSAELRPQDL 156
>gi|349803133|gb|AEQ17039.1| putative transcription initiation factor tfiid subunit 6 [Pipa
carvalhoi]
Length = 126
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL P DID AL +KN+EPIYG +FLPF++ASGGGREL F +EKEVD
Sbjct: 6 AVKFMHVGKRQKLTPSDIDSALKLKNVEPIYGFHAKEFLPFRYASGGGRELPFYEEKEVD 65
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
D+++ P+ ++ L+ HWL+IEGVQP +PENPPPV K QK E+ +P+
Sbjct: 66 LSDIISTPLPRVPMDVSLKAHWLSIEGVQPAIPENPPPVSKEQQKTEATEPL 117
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++PIYG +FLPF++ASGGGREL F +EKEVD D+++ P+ ++ L+ HWL+IE
Sbjct: 32 VEPIYGFHAKEFLPFRYASGGGRELPFYEEKEVDLSDIISTPLPRVPMDVSLKAHWLSIE 91
Query: 105 GVQPTVPENPPPVDKSAQKLES 126
GVQP +PENPPPV K QK E+
Sbjct: 92 GVQPAIPENPPPVSKEQQKTEA 113
>gi|358392554|gb|EHK41958.1| hypothetical protein TRIATDRAFT_229290 [Trichoderma atroviride IMI
206040]
Length = 468
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 35/327 (10%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R + DI AL + + EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 50 ALRLMRAARRTTMTVNDISLALRVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP-----ISK 241
DFE L+ P+ + + HWLAIEGVQP++P+NP + Q L P +S
Sbjct: 110 DFEKLINAPLPRVPRDMNFTAHWLAIEGVQPSIPQNPTSAELRPQDLLPKGPGANPALSA 169
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-- 299
L D ++G+P+ VK + + EL LY+ +I A + +
Sbjct: 170 LAGNDT-SAGQPS--------------VKHIVSKELI----LYFDKIQAAILDDNPDEEV 210
Query: 300 ---RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
R AL S+ DPGLH+++P FI + V + ++ L +M + AL++N+SL
Sbjct: 211 IRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHQL--DDTFTLKQMMELTNALIENKSL 268
Query: 357 YLEKYLHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQ 413
+L+ Y L +L+C+++++L G+ + LR A+ LL ++++ ++ S + ++
Sbjct: 269 FLDPYASSLSAPVLTCLMARKLGTDEGQDSLKEQYDLRQLAASLLGRIARKYSASNSLLR 328
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
++TR DP LYGAI G
Sbjct: 329 PKLTRTCLKYFLDPTKPPAVLYGAIHG 355
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY-CCKVIIQ----------------------- 46
E++K +AES+GI ++ D+A K L+ ++ Y +VII+
Sbjct: 13 ENVKDVAESVGIGSMSDEALKALAQDVEYRIGQVIIEALRLMRAARRTTMTVNDISLALR 72
Query: 47 -----PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
P+YG ++ L + AS G G+ L + +++EVDFE L+ P+ + + HW
Sbjct: 73 VLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPRVPRDMNFTAHW 132
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP++P+NP + Q L
Sbjct: 133 LAIEGVQPSIPQNPTSAELRPQDL 156
>gi|67468804|ref|XP_650399.1| TFIID subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467020|gb|EAL45013.1| TFIID subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407044367|gb|EKE42549.1| TFIID subunit, putative [Entamoeba nuttalli P19]
gi|449702106|gb|EMD42805.1| transcription initiation factor tfiid, putative [Entamoeba
histolytica KU27]
Length = 433
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 148/317 (46%), Gaps = 45/317 (14%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS-----QFLPFKHASGGGRELHFTDEK 184
K M HSKR L DI+ AL +K +EP YG S Q LP H E+ E+
Sbjct: 48 KFMRHSKRKILTIQDINSALKLKKLEPYYGYNPSIPLYYQRLPSNH------EMFVRQEQ 101
Query: 185 EVDF-EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG 243
+ E + P + ++ HWL +EGVQP +P+NP V + QK E
Sbjct: 102 SIGLNEAVHCQFFPDIPRDINVGCHWLTVEGVQPLIPQNPSVVVQEKQKQE--------- 152
Query: 244 KKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
ET+ K + H LS E Q+YY + E +++ + E
Sbjct: 153 ---------------------ETIETKPIIQHSLSKELQMYYDMVVEILNTNNKEKIDEC 191
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
L S+ TD GL ++ P +I+ N+ +L +L ++ +V A+ +NQ++ LE YLH
Sbjct: 192 LDSVRTDSGLQQLTPYFIRYISNHTLANL--GSLEILANMLSLVNAMRENQNINLEPYLH 249
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+L P IL+ +V+KQ+ G DNHW +R A+ ++ ++ ++ + R+ + A
Sbjct: 250 QLFPVILTLVVTKQI-GTNSYDNHWNIRVQAAAIVKKLRDRYSEKYGRLHARLLQTYLQA 308
Query: 424 INDPKINFPSLYGAIAG 440
I D + YG I G
Sbjct: 309 ITDATKPLTTQYGGIVG 325
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 45 IQPIYGLTVS-----QFLPFKHASGGGRELHFTDEKEVDF-EDLLTNLNPKSALETHLRT 98
++P YG S Q LP H E+ E+ + E + P + ++
Sbjct: 72 LEPYYGYNPSIPLYYQRLPSNH------EMFVRQEQSIGLNEAVHCQFFPDIPRDINVGC 125
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKL-ESISFKCM---SHSKRVKLLPVDIDDALNMKNI 154
HWL +EGVQP +P+NP V + QK E+I K + S SK +++ + + LN N
Sbjct: 126 HWLTVEGVQPLIPQNPSVVVQEKQKQEETIETKPIIQHSLSKELQMYYDMVVEILNTNNK 185
Query: 155 EPI 157
E I
Sbjct: 186 EKI 188
>gi|336378238|gb|EGO19397.1| hypothetical protein SERLADRAFT_364083 [Serpula lacrymans var.
lacrymans S7.9]
Length = 473
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDE 183
+ M H +R + DID AL + NIEP+YG + LPF G ++F ++
Sbjct: 59 RFMRHGRRTTMTTSDIDQALRVLNIEPLYGHNSFNPPAFRRALPFPQLPTVG-PVYFVED 117
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP--PVDKSAQKLESIDPISK 241
+E+DF+ +L + HWLA+EGVQP +PENPP P D Q++ PIS
Sbjct: 118 EEIDFDRVLREEKITVPKGVNWTAHWLAVEGVQPLIPENPPAIPRDTDQQEVTKSPPISN 177
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV-GSDEGRR 300
G S + T+ K ++ + + VKQ+ + EL QLYY +T + + SD +R
Sbjct: 178 TGFPPTPPSDRSTNKKQQQQQQQQQQLVKQVLSREL----QLYYTRLTTSLLPPSDFAKR 233
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ------NNLALLIYLMRMVKALLDNQ 354
AL SL D GL +LP + ++ E V VN ++ N+ +L ++ +V A+L+N
Sbjct: 234 TAALASLRHDAGLQALLPYLIRWVGESV-VNALKDSSDSDNDGKVLEVMLHVVSAILENS 292
Query: 355 SLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQT 414
+L++E YLH++LP ILS ++ L LR AS+ L+++ +T+ ++
Sbjct: 293 ALFIEPYLHQILPPILSTLLHSFL----PPSYATLLRTMASQTLSRLLTQHSTTYPSLSP 348
Query: 415 RVTRLLSNAINDPKINFPSLYGAIAG 440
R+ + L A+ P + + GAI G
Sbjct: 349 RIMKTLLLALISPDKSKNTREGAIRG 374
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 36/153 (23%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
++ ES+K +AES+GI NL D A L+ ++ Y
Sbjct: 17 YNPESVKDVAESLGISNLSDTVASSLAADVEYRMHQVIEEASRFMRHGRRTTMTTSDIDQ 76
Query: 40 CCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
+V+ I+P+YG + LPF G ++F +++E+DF+ +L
Sbjct: 77 ALRVLNIEPLYGHNSFNPPAFRRALPFPQLPTVG-PVYFVEDEEIDFDRVLREEKITVPK 135
Query: 93 ETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 125
+ HWLA+EGVQP +PENPP + + + E
Sbjct: 136 GVNWTAHWLAVEGVQPLIPENPPAIPRDTDQQE 168
>gi|340519130|gb|EGR49369.1| predicted protein [Trichoderma reesei QM6a]
Length = 468
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R + D+ AL + + EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 50 ALRLMRAARRTTMTVNDVSLALKVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + + HWLAIEGVQP++P+NP ++ +L D + K
Sbjct: 110 DFEKLINAPLPKVPRDMNFTAHWLAIEGVQPSIPQNP-----TSAELRPQDLLPK----- 159
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L +T + H +S E LY+ +I A + + R
Sbjct: 160 ----GPGANPALSALAGNDTGAGQPAVKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQ 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH+++P FI + V + ++ L +M + AL++N+SL+L+ Y
Sbjct: 216 AALGSVRDDPGLHQLVPYFINFIMDRVTHQL--DDTFTLKQMMELTNALIENKSLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L +L+C+++++L G+ + LR A+ LL ++++ ++ S + ++ ++TR
Sbjct: 274 ASSLSAPVLTCLMARKLGTDEGQDALKEQYDLRQLAASLLGRIARKYSASNSLLRPKLTR 333
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGAI G
Sbjct: 334 TCLKYFLDPTKPPAVLYGAIHG 355
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY-CCKVIIQ-------------------- 46
++ E++K +AES+GI ++ D+A K L+ ++ Y +VII+
Sbjct: 10 WNTENVKDVAESVGIGSMSDEALKALTQDVEYRIGQVIIEALRLMRAARRTTMTVNDVSL 69
Query: 47 --------PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + +
Sbjct: 70 ALKVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMNFT 129
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLAIEGVQP++P+NP + Q L
Sbjct: 130 AHWLAIEGVQPSIPQNPTSAELRPQDL 156
>gi|440301765|gb|ELP94151.1| transcription initiation factor tfiid, putative [Entamoeba invadens
IP1]
Length = 435
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 35/322 (10%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M HS+R L DI+ AL +K +EP YG + L ++ E+ E+ +D
Sbjct: 51 SSKFMRHSRRKVLSINDINSALKVKKMEPYYGYNPAVPLYYQRLHSN-HEMFVRQEQTID 109
Query: 188 F-EDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
E + + P + ++ HWL ++GVQP +P+N
Sbjct: 110 LSESVHSQFFPDIPRDINIGCHWLTVDGVQPQIPQN------------------------ 145
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
P+ EK++ ET+ K + H LS E Q+YY + E + + + L S
Sbjct: 146 ------PSVFVAEKVKKEETIETKPIIRHSLSKELQMYYDMVVEVLNTTQKEKISSCLDS 199
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
+ +D GL ++ P +I+ V N+ N L +L ++ +V AL +NQ++ LE YLH+L
Sbjct: 200 VKSDSGLQQLTPYFIRYISNHVLTNL--NTLDILSNMLGLVNALSENQNVNLEPYLHQLF 257
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
P IL+ +V+KQ+ G ++HW +R A++++ ++S+ ++ + R+ + AI +
Sbjct: 258 PVILTLVVTKQI-GTGAMEDHWEIRTRAAKIVKKLSERYSDKYGRLNARLLQTYLKAITE 316
Query: 427 PKINFPSLYGAIAGEGLVTERS 448
+ YG I G + ER+
Sbjct: 317 ATKPLTTQYGGIVGITAMGERA 338
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDF-EDLLTNLNPKSALETHLRTHWLAI 103
++P YG + L ++ E+ E+ +D E + + P + ++ HWL +
Sbjct: 77 MEPYYGYNPAVPLYYQRLHSN-HEMFVRQEQTIDLSESVHSQFFPDIPRDINIGCHWLTV 135
Query: 104 EGVQPTVPENPPP-VDKSAQKLESISFKCM---SHSKRVKLLPVDIDDALNMKNIEPI 157
+GVQP +P+NP V + +K E+I K + S SK +++ + + LN E I
Sbjct: 136 DGVQPQIPQNPSVFVAEKVKKEETIETKPIIRHSLSKELQMYYDMVVEVLNTTQKEKI 193
>gi|189237599|ref|XP_001808215.1| PREDICTED: similar to TFIID subunit [Tribolium castaneum]
Length = 372
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 118/183 (64%), Gaps = 1/183 (0%)
Query: 266 TVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIA 325
T+H+++ ATH LS E+Q+++ ++TE G +E R E LQ+LA D + + P + FI
Sbjct: 11 TIHLRRRATHPLSAEEQVFFVKLTEGAFGFNEHVRNETLQTLARDFHVKFLAPYLSQFIN 70
Query: 326 EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEAD 385
+ + VN+ +L+LLIY +R+VK+L+ N + ++++LH LLP+++SC+VS+++ + D
Sbjct: 71 DAICVNIAFPDLSLLIYSVRVVKSLMANPHVNIKEHLHLLLPAVISCVVSRKI-SKYSYD 129
Query: 386 NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVT 445
NHW LRDF+++++ + + S N ++TRV ++ A+ DP+ ++YG + G
Sbjct: 130 NHWTLRDFSAQVVATICCTHSNSINQMKTRVIKVYLRAVQDPRKPLTTVYGGLKGLSCFG 189
Query: 446 ERS 448
E +
Sbjct: 190 EET 192
>gi|409042582|gb|EKM52066.1| hypothetical protein PHACADRAFT_262519 [Phanerochaete carnosa
HHB-10118-sp]
Length = 418
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 25/317 (7%)
Query: 144 DIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNP 197
DID AL + NIEP+YG T + P+ G ++F +++E+DF+ ++
Sbjct: 5 DIDQALRVLNIEPLYGHYPHNPPTFRRAGPYPPNQAAG-AVYFVEDEEIDFDRIIKEEKI 63
Query: 198 KSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQ-KLESIDPISKLGKKDKD-------T 249
T HWLA+EGVQP +PENPP + K + + ++ + K +
Sbjct: 64 SVPKGTRWTAHWLAVEGVQPLIPENPPAIPKEHEPEAHGVNGVVKAASAGGSIFPPTPPS 123
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS-DEGRRFEALQSLA 308
S +P+ + K +T +QL LS E QLYY +T A V D+ +R AL SL
Sbjct: 124 SDRPSPIQAVKRPLQQTTQQQQLVKQVLSRELQLYYTRLTTALVPPVDQTKRTAALASLR 183
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNV-----VQNNLALLIYLMRMVKALLDNQSLYLEKYLH 363
D GL +LP + ++AEGV ++ N+ L L+ ++ ALLDN +L++E YLH
Sbjct: 184 HDAGLQALLPYLVRWVAEGVVASLRTGAQSDNDGKTLAVLLEVIGALLDNPTLFVEPYLH 243
Query: 364 ELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA 423
+LLP ILS ++ L PE H LR AS+ L+ + +T+ ++ R+ + L A
Sbjct: 244 QLLPPILSTLLHSSLP--PEHATH--LRTLASQTLSHLLTQHSTTYPSLSPRIVKTLLLA 299
Query: 424 INDPKINFPSLYGAIAG 440
+ + + GAI G
Sbjct: 300 LIGKDKSMGTREGAIWG 316
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 34 SDNITYCCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNL 86
+ +I +V+ I+P+YG T + P+ G ++F +++E+DF+ ++
Sbjct: 3 TSDIDQALRVLNIEPLYGHYPHNPPTFRRAGPYPPNQAAG-AVYFVEDEEIDFDRIIKEE 61
Query: 87 NPKSALETHLRTHWLAIEGVQPTVPENPPPVDK 119
T HWLA+EGVQP +PENPP + K
Sbjct: 62 KISVPKGTRWTAHWLAVEGVQPLIPENPPAIPK 94
>gi|341896828|gb|EGT52763.1| CBN-TAF-6.1 protein [Caenorhabditis brenneri]
Length = 471
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 13/189 (6%)
Query: 255 SAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLH 314
S KLE E V +K +A L+VEQQ++ K+I C+G D+ +R EAL +L D GL
Sbjct: 210 STKLE-----EKVGLKPMAIEMLTVEQQIFMKDIITVCMGQDDKKRHEALYTLENDAGLQ 264
Query: 315 EMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIV 374
+LP + I + + N+ Q L+L+IY R++++L N++ + LH +LP++LSC V
Sbjct: 265 VVLPHLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKACDMTVTLHHVLPALLSCCV 324
Query: 375 SKQLCGRPEADNHWALRDFASRLLT-----QVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
+ +C RPEADNHWALRDF+++ L QV K + T R+ DP
Sbjct: 325 GRNMCTRPEADNHWALRDFSAKTLVGIVREQVDKRDSGFTAR---RLFDFSYRIFKDPSS 381
Query: 430 NFPSLYGAI 438
+FP +YG I
Sbjct: 382 SFPMIYGTI 390
>gi|66805975|ref|XP_636709.1| TATA-binding protein-associated-factor [Dictyostelium discoideum
AX4]
gi|60465107|gb|EAL63207.1| TATA-binding protein-associated-factor [Dictyostelium discoideum
AX4]
Length = 542
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 10/181 (5%)
Query: 263 NVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA-LQSLATDPGLHEMLPRMC 321
N T+ VK H LS E Q++Y++IT + V SD + F+A L SL +D LH++LP
Sbjct: 238 NTSTI-VKPTVKHVLSKEIQMFYEKITNS-VKSDNQKLFDAALHSLKSDSSLHQLLPYFI 295
Query: 322 TFIAEGVKVNVVQN--NLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLC 379
FI+ V V QN NL LL LM+M +A+L+++ L E YLH+L+PSIL+C+V K+LC
Sbjct: 296 NFIS----VQVTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLC 351
Query: 380 GRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIA 439
P ++NHW LRDFA+RL++ V + F +++Q R+T+ L ++D + YGAI
Sbjct: 352 NSP-SENHWELRDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIV 410
Query: 440 G 440
G
Sbjct: 411 G 411
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS----QFLPFKHASGGGRELHFTDE 183
+ K M HSKR L DI++AL ++NIE +YG + S L F+ + + ++F ++
Sbjct: 44 AIKFMKHSKRDHLSTDDINNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLND 103
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD 227
KE+ F+++ + PK + L HWLA+EGVQP +P+NP P +
Sbjct: 104 KEMTFQEIASQPLPKVPRDPSLSAHWLALEGVQPLIPQNPSPYE 147
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 33/141 (23%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++K+IAES GI NLPD+ A++L+ ++ Y + I
Sbjct: 7 DTIKIIAESAGISNLPDEIAQQLASDVEYRIREIAQEAIKFMKHSKRDHLSTDDINNALG 66
Query: 45 ---IQPIYGLTVS----QFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
I+ +YG + S L F+ + + ++F ++KE+ F+++ + PK + L
Sbjct: 67 LRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMTFQEIASQPLPKVPRDPSLS 126
Query: 98 THWLAIEGVQPTVPENPPPVD 118
HWLA+EGVQP +P+NP P +
Sbjct: 127 AHWLALEGVQPLIPQNPSPYE 147
>gi|268534188|ref|XP_002632224.1| C. briggsae CBR-TAF-6.1 protein [Caenorhabditis briggsae]
Length = 423
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 127 ISFKCMSHSKRVKLLPVDIDDAL----NMKNIE----PIYGLTVSQFLPFKHASGGGREL 178
++ K H R K+ D+++ L NM +++ + ++Q + SG
Sbjct: 16 LAAKWSRHCSRHKMTVQDVENVLKYQQNMGSLKIATVDTLNMGINQMTQVQGTSGTSGIW 75
Query: 179 HFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD-KSAQKLESID 237
F + +VD E ++ + LR W G QP E P VD + E
Sbjct: 76 TF-QKMDVDVEK--DDIETFVQIPRELRVIWFMAPGRQPVQSEFTPNVDDEDGNYYEKNG 132
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNV-------ETVHVKQLATHELSVEQQLYYKEITE 290
P ++K TS+ L R + V +K L+VEQQ++ K+I
Sbjct: 133 PAVMAPIQEKVLPPTSTSSCLSMFRETVKCAKSDQKVGLKHPTLEILTVEQQIFMKDIIT 192
Query: 291 ACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
C+G D+ +R EAL +L TD GL LP + I + + N+ Q L+L+IY R++++L
Sbjct: 193 VCMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISCNISQRCLSLIIYAGRVLRSL 252
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTN 410
N++ + LH +LPS+LSC V + +C RPE DNHWALRDF+++ L + ++ +
Sbjct: 253 SHNKACDMSVTLHHVLPSLLSCCVCRNMCLRPETDNHWALRDFSAKTLVGLVRDHVDKRD 312
Query: 411 NIQT--RVTRLLSNAINDPKINFPSLYGAI 438
T R+ DP ++ +YG I
Sbjct: 313 GGFTARRLFDFAHRIFRDPASSYSMIYGTI 342
>gi|384485548|gb|EIE77728.1| hypothetical protein RO3G_02432 [Rhizopus delemar RA 99-880]
Length = 220
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 18/231 (7%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M HSKR KL DI+ AL +KN+EP+YG F+ + +++F D++E+DF+ +
Sbjct: 1 MRHSKRTKLTVEDINAALRVKNVEPLYGYMQGDSPKFRKTTVNSTDVYFDDDEEIDFDTV 60
Query: 192 LTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSG 251
L PK L+ HWLAIEGVQP +P+NP P D A+ L SK K ++G
Sbjct: 61 LNKPLPKIPLDVTFTAHWLAIEGVQPAIPQNPTPNDAKAELL------SKRNKTHASSNG 114
Query: 252 KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDP 311
T + V+VK L H LS E Q+Y++ ITEA + +E + +A +SL DP
Sbjct: 115 ITT----------DQVNVKPLVKHVLSKELQMYFERITEAILNDNERLQSQAFESLRLDP 164
Query: 312 GLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
GLH++LP I + V N NL +L ++ M ALL+N+ L++E Y+
Sbjct: 165 GLHQLLPYFVQHIHKKVAQN--HKNLDILEAMLSMAHALLNNKHLFIEPYV 213
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++P+YG F+ + +++F D++E+DF+ +L PK L+ HWLAIE
Sbjct: 23 VEPLYGYMQGDSPKFRKTTVNSTDVYFDDDEEIDFDTVLNKPLPKIPLDVTFTAHWLAIE 82
Query: 105 GVQPTVPENPPPVDKSAQKL 124
GVQP +P+NP P D A+ L
Sbjct: 83 GVQPAIPQNPTPNDAKAELL 102
>gi|46310076|gb|AAS87319.1| CG9348-like protein [Drosophila miranda]
Length = 163
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 93/155 (60%), Gaps = 29/155 (18%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------- 46
+YG+ +S ES+KVIAESIG+ L DDAAKEL ++I+ K I+Q
Sbjct: 2 LYGSVYSAESIKVIAESIGVGTLSDDAAKELGEDISIKLKRIVQDAAKFSNHAKRQKILI 61
Query: 47 -------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
P YG +PF+ A+GGGRELHFT++KE+D ++ N K L+
Sbjct: 62 SDIDMSLKLRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITANNAVKIPLD 121
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
T LR+HW +EG+QPTVPENPPP+ K +Q ++S++
Sbjct: 122 TTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVN 156
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 82/113 (72%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K +H+KR K+L DID +L ++N+EP YG +PF+ A+GGGRELHFT++KE+D
Sbjct: 49 KFSNHAKRQKILISDIDMSLKLRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLS 108
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL 242
++ N K L+T LR+HW +EG+QPTVPENPPP+ K +Q ++S++P+ KL
Sbjct: 109 EITANNAVKIPLDTTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKL 161
>gi|116199019|ref|XP_001225321.1| hypothetical protein CHGG_07665 [Chaetomium globosum CBS 148.51]
gi|88178944|gb|EAQ86412.1| hypothetical protein CHGG_07665 [Chaetomium globosum CBS 148.51]
Length = 451
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 158/321 (49%), Gaps = 36/321 (11%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M + R L D+ AL + ++EP+YG ++ L + AS G G+ L + D++EV
Sbjct: 50 SLRFMRAANRTTLTVQDVSQALKVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE ++ PK + HWLA+EGVQP++P+NP + S++ L P +
Sbjct: 110 DFEKVINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAETSSKDLLPKGPGA------ 163
Query: 247 KDTSGKPTSAKLEKLRNV-ETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQ 305
G P + + V +T H ++ T + + R AL+
Sbjct: 164 NPALGSPRGQRQRLVPAVGQTRHQQRTDTEKTRL--------------------REAALE 203
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
S+ +DPGLH++LP FI V ++ ++L +L +M + +A++ N +L+L+ Y L
Sbjct: 204 SVRSDPGLHQLLPYFVNFITNQVTHHL--DDLFVLRQMMELAEAVIQNPNLFLDPYASAL 261
Query: 366 LPSILSCIVSKQLCGRPEADN------HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
+L+C++S++L G + + LR+ A+ LL V++ + + ++ ++TR
Sbjct: 262 SAPVLTCLMSRKLGGAAADEGSDTLREQYGLRELAAGLLEMVARKYGATNALLRPKLTRT 321
Query: 420 LSNAINDPKINFPSLYGAIAG 440
DP L+GAI G
Sbjct: 322 CLKHFLDPTRPLAVLFGAIRG 342
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 36 NITYCCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALE 93
+++ KV+ ++P+YG ++ L + AS G G+ L + D++EVDFE ++ PK +
Sbjct: 66 DVSQALKVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEKVINAPLPKVPRD 125
Query: 94 THLRTHWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLA+EGVQP++P+NP + S++ L
Sbjct: 126 MSFTAHWLAVEGVQPSIPQNPTTAETSSKDL 156
>gi|400594744|gb|EJP62577.1| TATA box binding protein associated factor [Beauveria bassiana
ARSEF 2860]
Length = 462
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 158/322 (49%), Gaps = 25/322 (7%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
S + M ++R L D+ AL + + EP+YG ++ L F AS G G+ L + D++EV
Sbjct: 50 SLRLMRAARRTTLTVNDVSLALRVLDAEPLYGYDSTRPLRFGEASLGPGQPLFYIDDEEV 109
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+FE L+ PK + + HWLAIEGVQP++P+NP + +Q L
Sbjct: 110 EFEKLINAPLPKVPRDMNFTAHWLAIEGVQPSIPQNPTTAESRSQDL-----------LP 158
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGS--DE---GRRF 301
K T P L L ++ H +S E LY+ +I A + DE R
Sbjct: 159 KGTGANPA---LSALAGNDSSPSNPSVKHIVSKELILYFDKIQAAILDETPDEEVVRLRQ 215
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ DPGLH++ P FI + V + ++ L +M + AL++N++L+L+ Y
Sbjct: 216 AALGSVRDDPGLHQLAPYFINFIMDRVTHQL--DDTFTLKQMMELTNALIENKTLFLDPY 273
Query: 362 LHELLPSILSCIVSKQLCGRPEAD---NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
L +L+C+++++L D + LR A+ L+ +++ ++ S ++ ++TR
Sbjct: 274 ASSLSAPVLTCLMARKLGSDDGVDAMKEQYELRQLAASLIGRMAHKYSASNALLRPKLTR 333
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
DP LYGA+ G
Sbjct: 334 TCLRYFLDPTKPPAVLYGAVNG 355
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY-CCKVIIQ-------------------- 46
++ E++K +AES+GI L ++A K L+ ++ Y +VII+
Sbjct: 10 WNAENIKDVAESVGIGALNEEATKALAQDVEYRVGQVIIESLRLMRAARRTTLTVNDVSL 69
Query: 47 --------PIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG ++ L F AS G G+ L + D++EV+FE L+ PK + +
Sbjct: 70 ALRVLDAEPLYGYDSTRPLRFGEASLGPGQPLFYIDDEEVEFEKLINAPLPKVPRDMNFT 129
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLAIEGVQP++P+NP + +Q L
Sbjct: 130 AHWLAIEGVQPSIPQNPTTAESRSQDL 156
>gi|403413034|emb|CCL99734.1| predicted protein [Fibroporia radiculosa]
Length = 565
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 165/331 (49%), Gaps = 32/331 (9%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDE 183
+ M H++R + DID AL + NIEP+YG T + LP A G ++F ++
Sbjct: 149 RFMRHARRTTMTTSDIDQALRVLNIEPLYGHSPHNPPTFRRALPHSQAPSAG-PVYFVED 207
Query: 184 KEVDFEDLLTNLN---PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS 240
+E+DF+ +L PK T HWLA+EGVQP +PENPP + K +D
Sbjct: 208 EEIDFDRILREEKLTIPKGPRWT---AHWLAVEGVQPLIPENPPAIPKDT----DLDQAG 260
Query: 241 KLGKKDKDTS---GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV---G 294
+L + T P+S + + +QL LS E QLYY +T A +
Sbjct: 261 RLASPTRGTVFPLTPPSSDRPSPAQATRKQSQQQLVKQVLSRELQLYYTRLTSALLPPTT 320
Query: 295 SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGV-----KVNVVQNNLALLIYLMRMVKA 349
SD +R AL SL D GL +LP + ++ EGV + + +L L+ ++ A
Sbjct: 321 SDYAKRTAALASLRNDAGLQALLPYLVRWVGEGVVGALKGAAQSEGDGRVLEVLLDVIGA 380
Query: 350 LLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTST 409
LLDN +L++E YLH+LLP ILS ++ L P H LR AS++L+ + ++T+
Sbjct: 381 LLDNTTLFVEPYLHQLLPPILSILLHSALP--PTHAAH--LRTTASQILSHLLTQYSTTY 436
Query: 410 NNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
++ R+ + L A+ + + GAI G
Sbjct: 437 PSLPPRIMKTLLLALISSGKSRSTREGAIRG 467
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 34 SDNITYCCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNL 86
+ +I +V+ I+P+YG T + LP A G ++F +++E+DF+ +L
Sbjct: 161 TSDIDQALRVLNIEPLYGHSPHNPPTFRRALPHSQAPSAG-PVYFVEDEEIDFDRILREE 219
Query: 87 N---PKSALETHLRTHWLAIEGVQPTVPENPPPVDK 119
PK T HWLA+EGVQP +PENPP + K
Sbjct: 220 KLTIPKGPRWT---AHWLAVEGVQPLIPENPPAIPK 252
>gi|384249979|gb|EIE23459.1| DUF1546-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 569
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 154/325 (47%), Gaps = 18/325 (5%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M HSKR L DI+ AL + EPIYG F A G R+ F + D +
Sbjct: 46 KFMRHSKRHTLSTEDINSALILNLKEPIYGYGSKVPASFSTAQGL-RDTFFVQDPLCDIQ 104
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP-----PPVDK---SAQKLES---IDP 238
++L P+ +E HWLAIEG QP EN P K +A +L+S + P
Sbjct: 105 EVLAQPLPRCPVEVGTLPHWLAIEGKQPATAENAVIERRKPTAKRTRTAAQLDSTPGMQP 164
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD-E 297
K T +S+ + V H LS E LY + G
Sbjct: 165 CKNSSFKMFSTVPAASSSGRGSEKEERAAPVNGPVEHVLSQELLLYLDRVKGLLQGDGIG 224
Query: 298 GRRFEA--LQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQS 355
G+ E L SLA DPGL +LP + ++E ++ +L L L+++V+ALL N
Sbjct: 225 GQHLEVGLLTSLALDPGLSPLLPYLAQLVSE--EIQKSLKSLRRLRLLLKVVRALLQNAH 282
Query: 356 LYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR 415
+ LE +LH+L+P L+C+V+K L G P A++HW+LRD A+ + V + ++QTR
Sbjct: 283 MALEGHLHQLIPVTLTCLVAKNLGGSP-AEDHWSLRDAAAATVGAVIARYGADYPDVQTR 341
Query: 416 VTRLLSNAINDPKINFPSLYGAIAG 440
++R L A D + YGA+ G
Sbjct: 342 ISRQLLTAFLDSARPLATHYGAVRG 366
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 30/130 (23%)
Query: 13 MKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------------------- 46
++ AES+ + +L +AA L ++ + IIQ
Sbjct: 9 VQAFAESVAVGDLAPEAADALGPHLEVRLREIIQDASKFMRHSKRHTLSTEDINSALILN 68
Query: 47 ---PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAI 103
PIYG F A G R+ F + D +++L P+ +E HWLAI
Sbjct: 69 LKEPIYGYGSKVPASFSTAQGL-RDTFFVQDPLCDIQEVLAQPLPRCPVEVGTLPHWLAI 127
Query: 104 EGVQPTVPEN 113
EG QP EN
Sbjct: 128 EGKQPATAEN 137
>gi|440465447|gb|ELQ34767.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
Y34]
gi|440487666|gb|ELQ67441.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
P131]
Length = 511
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 162/341 (47%), Gaps = 46/341 (13%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D A + ++EP+YG ++ L + AS G G+ L + D++EV
Sbjct: 73 ALRFMRAANRTTLTVQDTSQAFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEV 132
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLA+EGVQP++P+NP + AQ+L P
Sbjct: 133 DFEKLINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAESRAQELIPKGP-------- 184
Query: 247 KDTSGKPTSAKLEKLRNVETVH--VKQLATHELSVEQQLYYKEITEACVGS--DE---GR 299
P L N+ H VKQ+ + EL LY+ +I A + DE
Sbjct: 185 ---GANPALNALAGNDNL-AFHPAVKQIISKELV----LYFDKIQAAVLDDTPDEEVVRL 236
Query: 300 RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
R AL S+ DPGLH+++P FIA V + ++ + +M + AL+DN +L+L+
Sbjct: 237 RNAALASVRNDPGLHQLVPYFANFIANQVTHRL--DDTFTVRQMMELTAALVDNSNLFLD 294
Query: 360 KYLHELLPSILSCIVSKQL--------------------CGRPEADNHWALRDFASRLLT 399
Y L +L+ ++S+++ R + LR+FA+ LL
Sbjct: 295 PYAGPLSAPVLTALMSRKIGASTSTSKQEEGSGSGNSSSVNREALREQFLLREFAASLLG 354
Query: 400 QVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+++ + + ++++++TR + DP P L+GA+ G
Sbjct: 355 KIAIKYTRANRHLRSKLTRTCLKYLLDPTKPAPVLFGALNG 395
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
++ E++K +AES+GIPN+ DDA + L+ ++ Y
Sbjct: 33 WNTENVKDVAESVGIPNINDDAVRCLAQDVEYRIGQVLVEALRFMRAANRTTLTVQDTSQ 92
Query: 40 CCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
KV+ ++P+YG ++ L + AS G G+ L + D++EVDFE L+ PK +
Sbjct: 93 AFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEKLINAPLPKVPRDMSFT 152
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLA+EGVQP++P+NP + AQ+L
Sbjct: 153 AHWLAVEGVQPSIPQNPTTAESRAQEL 179
>gi|389629410|ref|XP_003712358.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
70-15]
gi|351644690|gb|EHA52551.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
70-15]
Length = 512
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 162/341 (47%), Gaps = 46/341 (13%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D A + ++EP+YG ++ L + AS G G+ L + D++EV
Sbjct: 74 ALRFMRAANRTTLTVQDTSQAFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEV 133
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLA+EGVQP++P+NP + AQ+L P
Sbjct: 134 DFEKLINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAESRAQELIPKGP-------- 185
Query: 247 KDTSGKPTSAKLEKLRNVETVH--VKQLATHELSVEQQLYYKEITEACVGS--DE---GR 299
P L N+ H VKQ+ + EL LY+ +I A + DE
Sbjct: 186 ---GANPALNALAGNDNL-AFHPAVKQIISKELV----LYFDKIQAAVLDDTPDEEVVRL 237
Query: 300 RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
R AL S+ DPGLH+++P FIA V + ++ + +M + AL+DN +L+L+
Sbjct: 238 RNAALASVRNDPGLHQLVPYFANFIANQVTHRL--DDTFTVRQMMELTAALVDNSNLFLD 295
Query: 360 KYLHELLPSILSCIVSKQL--------------------CGRPEADNHWALRDFASRLLT 399
Y L +L+ ++S+++ R + LR+FA+ LL
Sbjct: 296 PYAGPLSAPVLTALMSRKIGASTSTSKQEEGSGSGNSSSVNREALREQFLLREFAASLLG 355
Query: 400 QVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+++ + + ++++++TR + DP P L+GA+ G
Sbjct: 356 KIAIKYTRANRHLRSKLTRTCLKYLLDPTKPAPVLFGALNG 396
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
++ E++K +AES+GIPN+ DDA + L+ ++ Y
Sbjct: 34 WNTENVKDVAESVGIPNINDDAVRCLAQDVEYRIGQVLVEALRFMRAANRTTLTVQDTSQ 93
Query: 40 CCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
KV+ ++P+YG ++ L + AS G G+ L + D++EVDFE L+ PK +
Sbjct: 94 AFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEKLINAPLPKVPRDMSFT 153
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLA+EGVQP++P+NP + AQ+L
Sbjct: 154 AHWLAVEGVQPSIPQNPTTAESRAQEL 180
>gi|390363871|ref|XP_783285.2| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 31/314 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M HSKR ++ D++ AL ++EPI+G ++ F+ L+F +++E+
Sbjct: 64 SAQFMKHSKRKRMTSDDVNKALRWSDVEPIHGYGSNEPAVFRQIKDTN--LYFVEDRELS 121
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
++ + P SA T L+ +WLA+EGV TV ++ P +A+ ++ I LG
Sbjct: 122 LSEIAMDTKIPNSAGNTSLKANWLALEGVHKTVVQSSDPGQAAAEGIQKI-----LG--- 173
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
G+ + +E L S +Q YY+ I +A +G+DE + L
Sbjct: 174 --VQGQGMTHSMEML----------------SSDQVTYYQHIIKAILGTDEEAKKVVLID 215
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP + F++ GVKV V L L L+ ++ ALL NQ +YL Y+ +L+
Sbjct: 216 LQTNSKIAGLLPYLVNFVSAGVKV--VSLELYQLTGLLYIIDALLRNQFIYLGPYMIQLV 273
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
+++ CI+ ++HW LRD+A+RLL + + S + ++ + D
Sbjct: 274 STVMYCILEPLAVSINPLNDHWGLRDYAARLLLPILRCSKESKSKFYHQMLTAFQEVMKD 333
Query: 427 PKINFPSLYGAIAG 440
P + YGA+ G
Sbjct: 334 PARPLCTYYGAVMG 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 35/161 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS +S+K +AES G L ++ A L++++ Y + +Q
Sbjct: 24 FSKDSIKTMAESAGHERLSEETAAILAEDVCYRLREAVQASAQFMKHSKRKRMTSDDVNK 83
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLR 97
PI+G ++ F+ L+F +++E+ ++ + P SA T L+
Sbjct: 84 ALRWSDVEPIHGYGSNEPAVFRQIKDTN--LYFVEDRELSLSEIAMDTKIPNSAGNTSLK 141
Query: 98 THWLAIEGVQPTVPENPPPVDKSA---QKLESISFKCMSHS 135
+WLA+EGV TV ++ P +A QK+ + + M+HS
Sbjct: 142 ANWLALEGVHKTVVQSSDPGQAAAEGIQKILGVQGQGMTHS 182
>gi|322694809|gb|EFY86629.1| transcription initiation factor TFIID complex 60 kDa subunit
[Metarhizium acridum CQMa 102]
Length = 487
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 47/344 (13%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R L D+ AL + ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 52 ALRLMRAARRTTLTVNDVSLALKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEV 111
Query: 187 DFEDLLTNLNPKSALETHLR----------------------THWLAIEGVQPTVPENPP 224
DFE L+ PK + + HWLAIEGVQP++P+NP
Sbjct: 112 DFEKLINAPLPKVPRDMNFTGTLPVITITWMSLTSFILYKKTAHWLAIEGVQPSIPQNPT 171
Query: 225 PVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLY 284
+ +Q+L G + L L + V VK H +S E LY
Sbjct: 172 TAESRSQELLP--------------KGPGANPALAALAGNDNVAVKPSVKHIVSKELILY 217
Query: 285 YKEITEACVGSDEGR-----RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLAL 339
+ +I A + + R AL S+ DPGLH+++P FI + V ++ ++
Sbjct: 218 FDKIQAAILDDNPDEEVVRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHHL--DDTFT 275
Query: 340 LIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLC---GRPEADNHWALRDFASR 396
L +M + AL++N+SL+L+ Y L L+C+++++L G + + LR A+
Sbjct: 276 LRQMMELTNALIENKSLFLDPYASSLSAPALTCLMARKLGTDDGVDAMKDQYDLRQLAAS 335
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
L+ ++++ ++ S ++ ++TR DP LYGAI G
Sbjct: 336 LVGRIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAIYG 379
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 52/166 (31%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
+++K +AES+GI +L D+A K L+ ++ Y K
Sbjct: 15 DNVKDVAESVGISSLNDEALKALTQDVEYRIGQVIIEALRLMRAARRTTLTVNDVSLALK 74
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR--- 97
V+ ++P+YG ++ L + AS G G+ L + +++EVDFE L+ PK + +
Sbjct: 75 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMNFTGTL 134
Query: 98 -------------------THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLAIEGVQP++P+NP + +Q+L
Sbjct: 135 PVITITWMSLTSFILYKKTAHWLAIEGVQPSIPQNPTTAESRSQEL 180
>gi|346318510|gb|EGX88113.1| transcription initiation factor [Cordyceps militaris CM01]
Length = 470
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 164/331 (49%), Gaps = 35/331 (10%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG-GRELHFTDEKEV 186
S + M ++R L D+ AL + + EP+YG ++ L F AS G G+ L + D++EV
Sbjct: 50 SLRLMRAARRTTLTVNDVSLALRVLDAEPLYGYDSTRPLRFGEASMGPGQPLFYIDDEEV 109
Query: 187 DFEDLLT--------NLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
+FE L+ ++N + L HWLAIEGVQP++P+NP + +L+ + P
Sbjct: 110 EFEKLINAPLPKVPRDMNFTARLTAEGTAHWLAIEGVQPSIPQNPTTAES---RLQDLLP 166
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVET-VHVKQLATHELSVEQQLYYKEITEACVGSDE 297
K T P + L N T VK + + EL LY+ +I A + +
Sbjct: 167 --------KGTGANPALSALAGNDNAPTNPSVKHIVSKELI----LYFDKIQAAILDENP 214
Query: 298 GR-----RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLD 352
+ R AL S+ DPGLH++ P FI + V + ++ L +M + AL++
Sbjct: 215 DQEVVRLRQAALGSVRDDPGLHQLAPYFINFIMDRVTHQL--DDTFTLKQMMELTNALIE 272
Query: 353 NQSLYLEKYLHELLPSILSCIVSKQLC---GRPEADNHWALRDFASRLLTQVSKNFNTST 409
N++L+L+ Y L +L+C+++++L G + + LR A+ L+ +++ + S
Sbjct: 273 NKTLFLDPYASSLSAPVLTCLMARKLGTDDGVDAMKDQYELRQLAASLIGRMAHKYAASN 332
Query: 410 NNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ ++ ++TR DP LYGA+ G
Sbjct: 333 SLLRPKLTRTCLRYFLDPTKPPAVLYGAVNG 363
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 38/152 (25%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY-CCKVIIQ----------------------- 46
E++K +AES+GI L ++A K L+ ++ Y +VII+
Sbjct: 13 ENIKDVAESVGIGALNEEATKALAQDVEYRVGQVIIESLRLMRAARRTTLTVNDVSLALR 72
Query: 47 -----PIYGLTVSQFLPFKHASGG-GRELHFTDEKEVDFEDLLT--------NLNPKSAL 92
P+YG ++ L F AS G G+ L + D++EV+FE L+ ++N + L
Sbjct: 73 VLDAEPLYGYDSTRPLRFGEASMGPGQPLFYIDDEEVEFEKLINAPLPKVPRDMNFTARL 132
Query: 93 ETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLAIEGVQP++P+NP + Q L
Sbjct: 133 TAEGTAHWLAIEGVQPSIPQNPTTAESRLQDL 164
>gi|392591785|gb|EIW81112.1| TAF-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 480
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 171/352 (48%), Gaps = 40/352 (11%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS-------QFLPFK 169
V+ Q++ + + M H++R L D+D+AL NIEP+YG + + PF
Sbjct: 45 VEYRIQQVIEEAARFMRHARRTTLTTADMDNALRTLNIEPLYGFGGATVPPPFRRAAPFP 104
Query: 170 HASGGGRE-LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDK 228
H G G ++F ++ EVDF+ +L HWLA+EGVQP +PENPP V +
Sbjct: 105 HMQGQGHGPIYFIEDDEVDFDRVLREEKITVPRGVSWAAHWLAVEGVQPLIPENPPAVPR 164
Query: 229 SAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEI 288
+ + +D + + +K + +QL LS E QLYY +
Sbjct: 165 DSDQ-----------PPQQDGAANTAALAAQKKPQQQQQQQQQLVKQVLSRELQLYYARL 213
Query: 289 TEACV-GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLA------LLI 341
T + + +D +R AL SL +D GL +LP + +I EGV VNV++ L
Sbjct: 214 TASLLPPTDNAKRTAALASLRSDAGLQALLPYLVKWIGEGV-VNVLREGSGSESDGRTLE 272
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
L+ V A+L+N +L++E YLH++LP +LS ++ L P +H LR AS L +V
Sbjct: 273 VLLDAVSAILENNTLFVEPYLHQILPPLLSTLLHTSLP--PTHASH--LRATASSTLARV 328
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLY---------GAIAGEGLV 444
+T+ ++ R+T+ L A+ NF + + GAI G G +
Sbjct: 329 LTTHSTTYPSLTPRITKTLLLALLGTSTNFSNGHQGASFGTRIGAIRGLGAI 380
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ E+++ +AES+GI +L D A L+ ++ Y + +I+
Sbjct: 16 YRPEAVQDVAESVGISSLSDSVASALASDVEYRIQQVIEEAARFMRHARRTTLTTADMDN 75
Query: 47 --------PIYGLTVS-------QFLPFKHASGGGRE-LHFTDEKEVDFEDLLTNLNPKS 90
P+YG + + PF H G G ++F ++ EVDF+ +L
Sbjct: 76 ALRTLNIEPLYGFGGATVPPPFRRAAPFPHMQGQGHGPIYFIEDDEVDFDRVLREEKITV 135
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPPVDKSAQK 123
HWLA+EGVQP +PENPP V + + +
Sbjct: 136 PRGVSWAAHWLAVEGVQPLIPENPPAVPRDSDQ 168
>gi|17536589|ref|NP_493919.1| Protein TAF-6.1 [Caenorhabditis elegans]
gi|351059362|emb|CCD73650.1| Protein TAF-6.1 [Caenorhabditis elegans]
Length = 470
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 171/345 (49%), Gaps = 33/345 (9%)
Query: 120 SAQKLESI---SFKCMSHSKRVKLLPVDIDDA---------LNMKNIEPIYGLTVSQFLP 167
S +KL+ I S K S R ++ D++ A LN+ +++ + L + Q P
Sbjct: 52 SREKLKEIVRLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTL-NLGIQQLQP 110
Query: 168 FKHASGGGRE-LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPV 226
+ S G L + + +VD ED T + K + + ++ L EG QP E V
Sbjct: 111 IQGTSTGIYSFLKSSADVDVDKEDTETFI--KIPRDLRVISYPLVNEG-QPVQSEYTVNV 167
Query: 227 DKS-AQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRN-VETVHVKQL-----ATHE-LS 278
D+ E I P +K+T T++ L+ R+ V+T + Q +T E L+
Sbjct: 168 DEDDGNFFEKIVPEVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILT 227
Query: 279 VEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLA 338
VEQQ++ K+I C+G D+ +R EAL +L TD GL LP + I + + N+ Q L+
Sbjct: 228 VEQQIFMKDIITVCMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLS 287
Query: 339 LLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLL 398
L+IY R++++L N++ + LH +LP++LSC V + +C RPE DNHWALRDF+++ L
Sbjct: 288 LIIYAGRVLRSLSHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTL 347
Query: 399 T-----QVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
QV K+ R+ D +F +YG +
Sbjct: 348 VGLVRDQVDKH---DAGRTARRLFDFSHRIFRDTGSSFSMIYGTV 389
>gi|7509154|pir||T32410 hypothetical protein W09B6.2 - Caenorhabditis elegans
Length = 707
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 33/345 (9%)
Query: 120 SAQKLESI---SFKCMSHSKRVKLLPVDIDDA---------LNMKNIEPIYGLTVSQFLP 167
S +KL+ I S K S R ++ D++ A LN+ +++ + L + Q P
Sbjct: 289 SREKLKEIVRLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTL-NLGIQQLQP 347
Query: 168 FKHASGGGRE-LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPV 226
+ S G L + + +VD ED T + K + + ++ L EG QP E V
Sbjct: 348 IQGTSTGIYSFLKSSADVDVDKEDTETFI--KIPRDLRVISYPLVNEG-QPVQSEYTVNV 404
Query: 227 DKS-AQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNV-------ETVHVKQLATHELS 278
D+ E I P +K+T T++ L+ R+ + V +K L+
Sbjct: 405 DEDDGNFFEKIVPEVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILT 464
Query: 279 VEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLA 338
VEQQ++ K+I C+G D+ +R EAL +L TD GL LP + I + + N+ Q L+
Sbjct: 465 VEQQIFMKDIITVCMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLS 524
Query: 339 LLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLL 398
L+IY R++++L N++ + LH +LP++LSC V + +C RPE DNHWALRDF+++ L
Sbjct: 525 LIIYAGRVLRSLSHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTL 584
Query: 399 T-----QVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
QV K+ R+ D +F +YG +
Sbjct: 585 VGLVRDQVDKH---DAGRTARRLFDFSHRIFRDTGSSFSMIYGTV 626
>gi|409079193|gb|EKM79555.1| hypothetical protein AGABI1DRAFT_74664, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 490
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 54/350 (15%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG-LTVSQ-----FLPFKHASGGGRE------ 177
+ M H +R L DID AL NIEP+YG L SQ LPF + G
Sbjct: 58 RFMRHGRRTTLTSSDIDLALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSSQPSAAG 117
Query: 178 -LHFTDEKEVDFEDLLTN---LNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 233
++F +++E+DFE ++ + PK T HWLA+EGVQP +PENPP V +
Sbjct: 118 PVYFVEDEEIDFERVMREEKVMLPKGVSWT---AHWLAVEGVQPLIPENPPAVPRE---- 170
Query: 234 ESIDPISKLGKKDKDTSGKPTSA------------KLEKLRNVETVHVKQLATHELSVEQ 281
+P + K T +A K L N + L LS E
Sbjct: 171 ---EPTAAGETKVNGTLTSVPAATGAAGLLPGGGQKHGALPNASSAQSANLVKQVLSREL 227
Query: 282 QLYYKEITEACVGSDEG-----RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ-- 334
QLYY +T + + ++ AL SL D GL +LP + ++ EGV V++
Sbjct: 228 QLYYTRLTSSLLPPSNTLDYTTKKAAALASLRHDAGLQALLPYLVRWVGEGV-AGVLKTG 286
Query: 335 ----NNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWAL 390
+ +L LM +V ALL+N++L++E YLH+LLP ILS ++ L P A + L
Sbjct: 287 KQDDGDGKVLEVLMDVVSALLENKTLFVEPYLHQLLPPILSTLLHSSL---PAALST-QL 342
Query: 391 RDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
R AS+ L++V +T+ ++ R+ + L A+ P + + GA+ G
Sbjct: 343 RVCASQTLSRVLTQHSTTYPSLSPRIMKTLLLALISPGKSRGTREGAVRG 392
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 49/157 (31%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI----------------------- 44
+ +++K AES+GI N+ D A L+ ++ Y +
Sbjct: 17 YKSDAIKDAAESLGI-NISDTVASVLASDVEYRIHQVVEEASRFMRHGRRTTLTSSDIDL 75
Query: 45 ------IQPIYG-LTVSQ-----FLPFKHASGGGRE-------LHFTDEKEVDFEDLLTN 85
I+P+YG L SQ LPF + G ++F +++E+DFE ++
Sbjct: 76 ALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSSQPSAAGPVYFVEDEEIDFERVMRE 135
Query: 86 ---LNPKSALETHLRTHWLAIEGVQPTVPENPPPVDK 119
+ PK T HWLA+EGVQP +PENPP V +
Sbjct: 136 EKVMLPKGVSWT---AHWLAVEGVQPLIPENPPAVPR 169
>gi|426196098|gb|EKV46027.1| hypothetical protein AGABI2DRAFT_152253 [Agaricus bisporus var.
bisporus H97]
Length = 507
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 165/343 (48%), Gaps = 40/343 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG-LTVSQ-----FLPFKHASGGGRE------ 177
+ M H +R L DID AL NIEP+YG L SQ LPF + G
Sbjct: 58 RFMRHGRRTTLTSSDIDLALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSNQPSAAG 117
Query: 178 -LHFTDEKEVDFEDLLTN---LNPKSALETHLRTHWLAIEGVQPTVPENPPPVDK----S 229
++F +++E+DFE ++ + PK T HWLA+EGVQP +PENPP V + +
Sbjct: 118 PVYFVEDEEIDFERVMREEKVMLPKGVSWT---AHWLAVEGVQPLIPENPPAVPREEPTA 174
Query: 230 AQKLESIDPISKL-GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEI 288
A + + ++ + K L N + L LS E QLYY +
Sbjct: 175 AGETKVNGALTSVPAATGAAGLLPGGGQKHGALPNASSAQSANLVKQVLSRELQLYYTRL 234
Query: 289 TEACVGSDEG-----RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ------NNL 337
T + + ++ AL SL D GL +LP + ++ EGV V++ +
Sbjct: 235 TSSLLPPSNTLDYTTKKAAALASLRHDAGLQALLPYLVRWVGEGV-AGVLKTGKQDDGDG 293
Query: 338 ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRL 397
+L LM +V ALL+N++L++E YLH+LLP ILS ++ L P A + LR AS+
Sbjct: 294 KVLEVLMDVVSALLENKTLFVEPYLHQLLPPILSTLLHSSL---PAALST-QLRVCASQT 349
Query: 398 LTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
L+ V +T+ ++ R+ + L A+ P + + GA+ G
Sbjct: 350 LSHVLTQHSTTYPSLSPRIMKTLLLALISPGKSRGTREGAVRG 392
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 49/157 (31%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI----------------------- 44
+ ++++ +AES+GI N+ D A L+ ++ Y +
Sbjct: 17 YKSDAIRDVAESLGI-NISDTVASVLASDVEYRIHQVVEEASRFMRHGRRTTLTSSDIDL 75
Query: 45 ------IQPIYG-LTVSQ-----FLPFKHASGGGRE-------LHFTDEKEVDFEDLLTN 85
I+P+YG L SQ LPF + G ++F +++E+DFE ++
Sbjct: 76 ALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSNQPSAAGPVYFVEDEEIDFERVMRE 135
Query: 86 ---LNPKSALETHLRTHWLAIEGVQPTVPENPPPVDK 119
+ PK T HWLA+EGVQP +PENPP V +
Sbjct: 136 EKVMLPKGVSWT---AHWLAVEGVQPLIPENPPAVPR 169
>gi|270006902|gb|EFA03350.1| hypothetical protein TcasGA2_TC013335 [Tribolium castaneum]
Length = 316
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 275 HELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ 334
H LS E+Q+++ ++TE G +E R E LQ+LA D + + P + FI + + VN+
Sbjct: 44 HPLSAEEQVFFVKLTEGAFGFNEHVRNETLQTLARDFHVKFLAPYLSQFINDAICVNIAF 103
Query: 335 NNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFA 394
+L+LLIY +R+VK+L+ N + ++++LH LLP+++SC+VS+++ + DNHW LRDF+
Sbjct: 104 PDLSLLIYSVRVVKSLMANPHVNIKEHLHLLLPAVISCVVSRKI-SKYSYDNHWTLRDFS 162
Query: 395 SRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTERS 448
++++ + + S N ++TRV ++ A+ DP+ ++YG + G E +
Sbjct: 163 AQVVATICCTHSNSINQMKTRVIKVYLRAVQDPRKPLTTVYGGLKGLSCFGEET 216
>gi|170092004|ref|XP_001877224.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648717|gb|EDR12960.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 475
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 157/329 (47%), Gaps = 29/329 (8%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT------VSQFLPFKHASGGGRELHFTDE 183
+ M H +R + DID A + NIEP+YG T + LPF G ++F ++
Sbjct: 56 RFMRHGRRTTMSTSDIDQAFRVLNIEPLYGHTPHNPHTFRRALPFPQVPAAG-PVYFVED 114
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP-----VDKSAQKLESIDP 238
+E+DF+ +L HWLA+EGVQP +PENPP VD K ES+
Sbjct: 115 EEIDFDRVLKEEKIALPKGVSWTAHWLAVEGVQPLIPENPPAIPRETVDADGTKGESLTK 174
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV--GSD 296
++ G T+ AK +QL LS E QLYY +T + + D
Sbjct: 175 LNGTGLLPTPTTAPQQGAK------AAPGQQQQLVKQVLSRELQLYYARLTSSLLPPSLD 228
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLA-----LLIYLMRMVKALL 351
+R AL SL D GL +LP + ++ EGV + + + + +L L+ + AL+
Sbjct: 229 LTKRTAALASLRHDAGLQALLPYLVRWVGEGVVGTLKEGSQSETDGRVLEVLLDVTSALI 288
Query: 352 DNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNN 411
+N +L++E YLH++ P LS ++ L + LR AS+ L+++ +T+ +
Sbjct: 289 ENNTLFIEPYLHQIFPPTLSILLHSSL----PLSHATLLRTSASQTLSRLLTQHSTTYPS 344
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ R+ + L A+ P + + GAI G
Sbjct: 345 LSPRIMKTLLLALISPGKSKGTREGAIRG 373
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 34 SDNITYCCKVI-IQPIYGLT------VSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNL 86
+ +I +V+ I+P+YG T + LPF G ++F +++E+DF+ +L
Sbjct: 68 TSDIDQAFRVLNIEPLYGHTPHNPHTFRRALPFPQVPAAG-PVYFVEDEEIDFDRVLKEE 126
Query: 87 NPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLP 142
HWLA+EGVQP +PENPP + + + + ++ LLP
Sbjct: 127 KIALPKGVSWTAHWLAVEGVQPLIPENPPAIPRETVDADGTKGESLTKLNGTGLLP 182
>gi|336365599|gb|EGN93949.1| hypothetical protein SERLA73DRAFT_115423 [Serpula lacrymans var.
lacrymans S7.3]
Length = 461
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 43/344 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDE 183
+ M H +R + DID AL + NIEP+YG + LPF G ++F ++
Sbjct: 59 RFMRHGRRTTMTTSDIDQALRVLNIEPLYGHNSFNPPAFRRALPFPQLPTVG-PVYFVED 117
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP--PVDKSAQKLESIDPISK 241
+E+DF+ +L + HWLA+EGVQP +PENPP P D Q++ PIS
Sbjct: 118 EEIDFDRVLREEKITVPKGVNWTAHWLAVEGVQPLIPENPPAIPRDTDQQEVTKSPPISN 177
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV-GSDEGRR 300
G S + T+ K ++ + + VKQ+ + EL QLYY +T + + SD +R
Sbjct: 178 TGFPPTPPSDRSTNKKQQQQQQQQQQLVKQVLSREL----QLYYTRLTTSLLPPSDFAKR 233
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ------NNLALLIYLMRMVKALLDNQ 354
AL SL D GL +LP + ++ E V VN ++ N+ +L ++ +V A+L+N
Sbjct: 234 TAALASLRHDAGLQALLPYLIRWVGESV-VNALKDSSDSDNDGKVLEVMLHVVSAILENS 292
Query: 355 SLYLEKY------------------LHELLPSILSCIVSKQLCGRPEADNHWALRDFASR 396
+L++E Y LH++LP ILS ++ L LR AS+
Sbjct: 293 ALFIEPYVSLQFFTIQYLLNHLVLQLHQILPPILSTLLHSFL----PPSYATLLRTMASQ 348
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
L+++ +T+ ++ R+ + L A+ P + + GAI G
Sbjct: 349 TLSRLLTQHSTTYPSLSPRIMKTLLLALISPDKSKNTREGAIRG 392
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 36/153 (23%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
++ ES+K +AES+GI NL D A L+ ++ Y
Sbjct: 17 YNPESVKDVAESLGISNLSDTVASSLAADVEYRMHQVIEEASRFMRHGRRTTMTTSDIDQ 76
Query: 40 CCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
+V+ I+P+YG + LPF G ++F +++E+DF+ +L
Sbjct: 77 ALRVLNIEPLYGHNSFNPPAFRRALPFPQLPTVG-PVYFVEDEEIDFDRVLREEKITVPK 135
Query: 93 ETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 125
+ HWLA+EGVQP +PENPP + + + E
Sbjct: 136 GVNWTAHWLAVEGVQPLIPENPPAIPRDTDQQE 168
>gi|402080997|gb|EJT76142.1| transcription initiation factor TFIID subunit 6 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 527
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M + R L D A + ++EP+YG ++ L + AS G G+ L + D++EV
Sbjct: 66 ALRFMRAANRTTLTVQDTSQAFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEV 125
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DFE L+ PK + HWLA+EGVQP++P+NP + AQ+L P
Sbjct: 126 DFEKLINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAESRAQELIPKGP-------- 177
Query: 247 KDTSGKPTSAKLEKLRNVETVH--VKQLATHELSVEQQLYYKEITEACVG---SDEGRRF 301
P + L N+ H VKQ+ + EL LY+ +I A + +E R
Sbjct: 178 ---GANPALSALAGNDNL-AFHPAVKQIISKELV----LYFDKIQAAVLDDSPDEETARL 229
Query: 302 E--ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
AL+S+ TDPGLH+++P FIA V + ++ L +M + AL+DN L+L+
Sbjct: 230 REAALESVRTDPGLHQLVPYFANFIANQVTHRL--DDTFTLRMMMELTAALVDNPHLFLD 287
Query: 360 KYLHELLPSILSCIVSKQLCGRPEAD---------------------------------- 385
Y L +L+ ++S+++ G +
Sbjct: 288 PYAGPLSAPVLTALMSRKIGGGGASAPTAAAAPAPTASNGSGMDVDGAVAAPAAPPADPI 347
Query: 386 -NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ + LR+FA+ LL +++ + + ++++++TR + DP LYGA+ G
Sbjct: 348 HDQFLLREFAASLLGRIATKYTRANKHLRSKLTRTCLKYLLDPTKPPAVLYGALNG 403
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 30/147 (20%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
++ E++K +AES+GIPN+ +DA + LS ++ Y
Sbjct: 26 WNTENVKDVAESVGIPNIGEDALRCLSQDVEYRIGQVIVEALRFMRAANRTTLTVQDTSQ 85
Query: 40 CCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
KV+ ++P+YG ++ L + AS G G+ L + D++EVDFE L+ PK +
Sbjct: 86 AFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEKLINAPLPKVPRDMSFT 145
Query: 98 THWLAIEGVQPTVPENPPPVDKSAQKL 124
HWLA+EGVQP++P+NP + AQ+L
Sbjct: 146 AHWLAVEGVQPSIPQNPTTAESRAQEL 172
>gi|361130087|gb|EHL01941.1| putative Transcription initiation factor TFIID subunit 6 [Glarea
lozoyensis 74030]
Length = 338
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 25/242 (10%)
Query: 207 THWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVET 266
HWLA+EGVQP++P+NP + A +L P P+ A L NV
Sbjct: 5 AHWLAVEGVQPSIPQNPTTGEARAGELVPKGP-----------GANPSLAALAGNDNVA- 52
Query: 267 VHVKQLATHELSVEQQLYYKEITEACVGSDE-----GRRFEALQSLATDPGLHEMLPRMC 321
K L H LS E L++ +I A + D R A S+ DPGLH+++P
Sbjct: 53 --FKPLVKHVLSKELILFFDKIRAAILDDDPDPEVVSLRASAFASVRADPGLHQLVPYFV 110
Query: 322 TFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGR 381
FI+E KV NN +L +M + A+++N SL++ Y+ L+P +L+C+V + L
Sbjct: 111 QFISE--KVTHSLNNTFVLRQMMELATAMINNPSLFINPYVTALVPPVLTCLVGRNLGPE 168
Query: 382 PEADN---HWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
P A+N + LRD A+ L+ Q+SK + S+ ++ R+TR DP YGAI
Sbjct: 169 P-ANNLQEQYQLRDHAASLIGQISKKYAESSMQLRPRLTRTCLKYFLDPSRTLGEHYGAI 227
Query: 439 AG 440
G
Sbjct: 228 NG 229
>gi|449329892|gb|AGE96160.1| transcription initiation factor TFIId70kDa subunit [Encephalitozoon
cuniculi]
Length = 356
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 158/309 (51%), Gaps = 41/309 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL DI+ AL +N++P++G + L F+ G +++ ++E+D E
Sbjct: 45 KFMVGSKRTKLSIDDINYALTSRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L +++HWLAIEGVQP +P NP ++K P++K KDT
Sbjct: 102 EYLDRPLPKVPLRVSIQSHWLAIEGVQPQIPYNPILLEK---------PVAK-----KDT 147
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G E +K H L+ E +Y+ ++ +A + SDE A++ L
Sbjct: 148 LGTYQ----------EEAELKSQNKHMLTKELSMYFDKVIQA-MESDEQT---AMECLHN 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P E + N+ N L+ ++ + +LL N+ ++++ YLH++LPS+
Sbjct: 194 ESGIQQLVPYFVHHFNEQIVKNI--KNKEKLMTVVMVYSSLLKNKYIFVDPYLHQILPSL 251
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
++C++ K + D+ +R A+ ++ V NF++S + R+ LS A D +
Sbjct: 252 ITCVIGKNV------DDD--VRKVAADVVKYVFSNFSSSYKTLAPRIINTLSKAWLDREK 303
Query: 430 NFPSLYGAI 438
+ YGA+
Sbjct: 304 TESTQYGAL 312
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E++K A+S GI N+ DDA + LS ++ Y K + Q
Sbjct: 3 FSKETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L F+ G +++ ++E+D E+ L PK L +++
Sbjct: 63 ALTSRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLEEYLDRPLPKVPLRVSIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESI 127
HWLAIEGVQP +P NP ++K K +++
Sbjct: 120 HWLAIEGVQPQIPYNPILLEKPVAKKDTL 148
>gi|19074721|ref|NP_586227.1| TRANSCRIPTION INITIATION FACTOR TFIID 70kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
gi|19069363|emb|CAD25831.1| TRANSCRIPTION INITIATION FACTOR TFIID 70kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
Length = 356
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 158/309 (51%), Gaps = 41/309 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL DI+ AL +N++P++G + L F+ G +++ ++E+D E
Sbjct: 45 KFMVGSKRTKLSIDDINYALTSRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L +++HWLAIEGVQP +P NP ++K P++K KDT
Sbjct: 102 EYLDRPLPKVPLRVSIQSHWLAIEGVQPQIPYNPILLEK---------PVAK-----KDT 147
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G E +K H L+ E +Y+ ++ +A + SDE A++ L
Sbjct: 148 LGTYQ----------EEAELKSQNKHMLTKELGMYFDKVIQA-MESDEQT---AMECLHN 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P E + N+ N L+ ++ + +LL N+ ++++ YLH++LPS+
Sbjct: 194 ESGIQQLVPYFVHHFNEQIVKNI--KNKEKLMTVVMVYSSLLKNKYIFVDPYLHQILPSL 251
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
++C++ K + D+ +R A+ ++ V NF++S + R+ LS A D +
Sbjct: 252 ITCVIGKNV------DDD--VRKVAADVVKYVFSNFSSSYKTLAPRIINTLSKAWLDREK 303
Query: 430 NFPSLYGAI 438
+ YGA+
Sbjct: 304 TESTQYGAL 312
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E++K A+S GI N+ DDA + LS ++ Y K + Q
Sbjct: 3 FSKETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L F+ G +++ ++E+D E+ L PK L +++
Sbjct: 63 ALTSRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLEEYLDRPLPKVPLRVSIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESI 127
HWLAIEGVQP +P NP ++K K +++
Sbjct: 120 HWLAIEGVQPQIPYNPILLEKPVAKKDTL 148
>gi|303391124|ref|XP_003073792.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302940|gb|ADM12432.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
intestinalis ATCC 50506]
Length = 356
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 158/317 (49%), Gaps = 41/317 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL DI+ AL +N++P++G + L F+ G +++ ++E+D E
Sbjct: 45 KFMVGSKRTKLSIDDINYALISRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L +++HWLAIEGVQP +P NP ++K P++K KDT
Sbjct: 102 EYLDRPLPKIPLRPSIQSHWLAIEGVQPQIPYNPILLEK---------PVAK-----KDT 147
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G E +K H L+ E +Y+ ++ +A +E A++ L
Sbjct: 148 LGTYQ----------EEAELKSQNRHMLTKELSMYFDKVIQAMETDEEI----AMECLHN 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P E + N+ N L+ +M + +LL N+ ++++ YLH++LPS+
Sbjct: 194 ESGIQQLVPYFIHHFNEQIVKNI--KNKEKLMTVMMVYNSLLRNKYIFIDPYLHQILPSL 251
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
++C++ K + +R A+ ++ V NF++S + R+ LS A D +
Sbjct: 252 ITCVIGKSVDDE--------VRRVAADVVKYVFSNFSSSYKTLAPRIINTLSKAWLDKEK 303
Query: 430 NFPSLYGAIAGEGLVTE 446
+ YGA+ L+++
Sbjct: 304 TESTQYGALLCLSLLSK 320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E++K A+S GI N+ DDA + LS ++ Y K + Q
Sbjct: 3 FSKETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L F+ G +++ ++E+D E+ L PK L +++
Sbjct: 63 ALISRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLEEYLDRPLPKIPLRPSIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESI 127
HWLAIEGVQP +P NP ++K K +++
Sbjct: 120 HWLAIEGVQPQIPYNPILLEKPVAKKDTL 148
>gi|440494317|gb|ELQ76716.1| Transcription initiation factor TFIID, subunit TAF6, partial
[Trachipleistophora hominis]
Length = 389
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 37/309 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL D+++AL +N++PI+G L FK+ + DE EVD E
Sbjct: 68 KFMLFSKRTKLSIDDVNNALVTRNVDPIFGYDPKDNLIFKNDIVKSAIFYVPDE-EVDLE 126
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
D L PK L+ + +HWLAIEGVQP +P+NP ++K + K DP+
Sbjct: 127 DFLNQPLPKMPLKPKITSHWLAIEGVQPQIPQNPIIMEKPSLKQ---DPL---------- 173
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
+ E +KQ H +S E QLYY++I D + A++ L T
Sbjct: 174 -----------VTYTEESELKQTTKHVISKELQLYYEKILSFL--EDNEKITLAIECLKT 220
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P + I E + N+ + L+ I +LL N+ ++++ YLH+++PS+
Sbjct: 221 ESGIQQLIPYLIQNINEKILKNMESDLLSNFILFYH---SLLQNEHIFIDPYLHQIIPSL 277
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
L+CI+ K++ + +R A+ + V + + + + R+ + L+ D
Sbjct: 278 LTCIIGKRV-------KNVDIRKLAAETIKYVYDKYAITYDTLGPRIIKTLTKVWLDKDK 330
Query: 430 NFPSLYGAI 438
+ + Y A+
Sbjct: 331 SEDAHYSAL 339
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
+ PI+G L FK+ + DE EVD ED L PK L+ + +HWLAIE
Sbjct: 92 VDPIFGYDPKDNLIFKNDIVKSAIFYVPDE-EVDLEDFLNQPLPKMPLKPKITSHWLAIE 150
Query: 105 GVQPTVPENPPPVDKSAQK 123
GVQP +P+NP ++K + K
Sbjct: 151 GVQPQIPQNPIIMEKPSLK 169
>gi|429964403|gb|ELA46401.1| hypothetical protein VCUG_02123 [Vavraia culicis 'floridensis']
Length = 360
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 37/309 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL D+++AL +N++PI+G L FK+ + DE E+D E
Sbjct: 44 KFMLFSKRTKLSIDDVNNALTTRNVDPIFGYDPKDNLVFKNDIVKSAIFYVPDE-EIDLE 102
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
DLL PK L+ + +HWLAIEGVQP +P+NP ++K + K DP+
Sbjct: 103 DLLNQPPPKMPLKPKITSHWLAIEGVQPQIPQNPIIMEKPSLKQ---DPL---------- 149
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
+ E +KQ H +S E QLYY++I D + A++ L T
Sbjct: 150 -----------VTYTEESELKQTTKHVISKELQLYYEKILSFL--EDSEKITLAIECLKT 196
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P + I E + N+ L+ I +LL N+ ++++ YLH+++PS+
Sbjct: 197 ESGIQQLIPYLIQNINEKILKNMESEVLSNFILFYH---SLLQNEHIFIDPYLHQIIPSL 253
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
L+CI+ K++ + +R A+ + V ++ + + + R+ + LS D
Sbjct: 254 LTCIIGKRI-------KNMDIRKLAAETIKYVYDKYSITYDTLGPRIIKTLSKVWLDKDK 306
Query: 430 NFPSLYGAI 438
+ + Y A+
Sbjct: 307 SEDAHYAAL 315
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
+ PI+G L FK+ + DE E+D EDLL PK L+ + +HWLAIE
Sbjct: 68 VDPIFGYDPKDNLVFKNDIVKSAIFYVPDE-EIDLEDLLNQPPPKMPLKPKITSHWLAIE 126
Query: 105 GVQPTVPENPPPVDKSAQK 123
GVQP +P+NP ++K + K
Sbjct: 127 GVQPQIPQNPIIMEKPSLK 145
>gi|401827789|ref|XP_003888187.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
hellem ATCC 50504]
gi|392999387|gb|AFM99206.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
hellem ATCC 50504]
Length = 356
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 157/309 (50%), Gaps = 41/309 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL DI+ AL +N++P++G + L F+ G +++ ++E+D E
Sbjct: 45 KFMVGSKRTKLSIDDINYALISRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L +++HWLAIEGVQP +P NP ++K P++K KDT
Sbjct: 102 EYLDRPLPKIPLRPSIQSHWLAIEGVQPQIPYNPILLEK---------PVAK-----KDT 147
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G E +K H L+ E +Y+ ++ +A + +DE A++ L
Sbjct: 148 LGTYQ----------EEAELKSQNRHMLTKELSMYFDKVIQA-METDEQI---AMECLHN 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P E + N+ N L+ ++ + +LL N+ ++++ YLH++LPS+
Sbjct: 194 ESGIQQLVPYFVHHFNEQIMKNI--KNKEKLMTVIMVYNSLLRNKYIFIDPYLHQVLPSL 251
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
++C++ K + D+ +R AS ++ V NF+ S + R+ LS A D +
Sbjct: 252 ITCVIGKSV------DDE--VRRVASDVVKYVFSNFSGSYKTLAPRIINTLSKAWLDKEK 303
Query: 430 NFPSLYGAI 438
+ YGA+
Sbjct: 304 TESTQYGAL 312
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E++K A+S GI N+ DDA + LS ++ Y K + Q
Sbjct: 3 FSKETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L F+ G +++ ++E+D E+ L PK L +++
Sbjct: 63 ALISRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLEEYLDRPLPKIPLRPSIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESI 127
HWLAIEGVQP +P NP ++K K +++
Sbjct: 120 HWLAIEGVQPQIPYNPILLEKPVAKKDTL 148
>gi|449549185|gb|EMD40151.1| hypothetical protein CERSUDRAFT_112363 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 39/314 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGGGRELHFTDE 183
K M H++R + DID+AL + NIEP+YG T + LPF + G ++F ++
Sbjct: 60 KFMRHARRTTMTTADIDNALRVLNIEPLYGHTPHNPPTFRRALPFPNLQSAG-SVYFVED 118
Query: 184 KEVDFEDLLTNLN---PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS 240
+E+DF+ ++ PK T HWLA+EGVQP +PENPP + + DP
Sbjct: 119 EEIDFDRVIREEKLTLPKGVSWT---AHWLAVEGVQPLIPENPPAIPR--------DPDQ 167
Query: 241 KLGKKDKDTSG-----KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV-- 293
L G P S + +QL LS E QLYY +T A +
Sbjct: 168 DLKPGSPARPGTIFPPTPPSDGPHQAAKKAAQQQQQLVKQVLSRELQLYYTRLTSALLPT 227
Query: 294 --GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV-----VQNNLALLIYLMRM 346
+D +R AL SL D GL +LP + ++ EGV + + + +L + +
Sbjct: 228 SGTADPAKRTAALASLRHDAGLQALLPYIVRWVGEGVVAALRGGVQTEADARVLEVFLDV 287
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFN 406
+ ALLDN +L++E YLH+LLP +LS ++ L P H LR A++ L + +
Sbjct: 288 IGALLDNPTLFVEPYLHQLLPPLLSVLLHSALP--PAQSTH--LRTAAAQTLAHLLTTYA 343
Query: 407 TSTNNIQTRVTRLL 420
T+ ++ RV + L
Sbjct: 344 TTYPSLPPRVMKTL 357
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 42/150 (28%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
+ +S++ +AES+ I NL D+ A L+ ++ Y
Sbjct: 18 YKADSIRDVAESLNITNLSDNVASALASDVEYRIHQVVEEAAKFMRHARRTTMTTADIDN 77
Query: 40 CCKVI-IQPIYG------LTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN---PK 89
+V+ I+P+YG T + LPF + G ++F +++E+DF+ ++ PK
Sbjct: 78 ALRVLNIEPLYGHTPHNPPTFRRALPFPNLQSAG-SVYFVEDEEIDFDRVIREEKLTLPK 136
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDK 119
T HWLA+EGVQP +PENPP + +
Sbjct: 137 GVSWT---AHWLAVEGVQPLIPENPPAIPR 163
>gi|302851795|ref|XP_002957420.1| hypothetical protein VOLCADRAFT_68197 [Volvox carteri f.
nagariensis]
gi|300257224|gb|EFJ41475.1| hypothetical protein VOLCADRAFT_68197 [Volvox carteri f.
nagariensis]
Length = 463
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 151/330 (45%), Gaps = 24/330 (7%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + K H KR KL DI++A+ ++N+EP+YG + P K
Sbjct: 31 PDVEYRLREVIQDALKFARHCKRTKLTIQDINNAMRLRNLEPMYGF-LGNNDPAKFVRAT 89
Query: 175 GR-ELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 233
G +++F + V E + PK+ T + HWL IEGVQP EN + ++
Sbjct: 90 GHSDVYFVHDAMVPLEQITYAPLPKAPNHTTVMPHWLFIEGVQPHTEEN-----AAVERP 144
Query: 234 ESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV 293
+L + S + V+ H LS E Q +++ C
Sbjct: 145 PPPAKRPRLAAAGGPGTAGSVSER-----------VQLPVQHILSDEMQRLLEQVRAVCR 193
Query: 294 GSDEG---RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
G+ RR + ++LP + F+ + V + +L L ++R+++AL
Sbjct: 194 GNAIAFVFRRSIPGSCSGDRACMQQLLPYLTKFVCDEVAGGL--RHLPRLQMVLRVMQAL 251
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTN 410
L N S+ LE YLH L+P +L+C ++K L P D HW LRD A L+ V F
Sbjct: 252 LLNPSVQLEPYLHNLMPPLLTCCLAKALGPGPRCD-HWRLRDSAGSLVAAVCGRFGEPFY 310
Query: 411 NIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+++ +V++ L A+ D PS YGA+ G
Sbjct: 311 SLKVKVSKQLLRALLDGSKPLPSHYGAVMG 340
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 12 SMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------- 46
++K IA S+ + +L ++AAK L+ ++ Y + +IQ
Sbjct: 8 AVKAIALSVDVTHLTEEAAKALAPDVEYRLREVIQDALKFARHCKRTKLTIQDINNAMRL 67
Query: 47 ----PIYGLTVSQFLPFKHASGGGR-ELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
P+YG + P K G +++F + V E + PK+ T + HWL
Sbjct: 68 RNLEPMYGF-LGNNDPAKFVRATGHSDVYFVHDAMVPLEQITYAPLPKAPNHTTVMPHWL 126
Query: 102 AIEGVQPTVPEN 113
IEGVQP EN
Sbjct: 127 FIEGVQPHTEEN 138
>gi|195044977|ref|XP_001991913.1| GH17238 [Drosophila grimshawi]
gi|193901671|gb|EDW00538.1| GH17238 [Drosophila grimshawi]
Length = 735
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
Query: 261 LRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRM 320
L N + V K + H L EQ ++ ITE+C G ++ R AL+ L D + +LP +
Sbjct: 433 LFNPDEVRFKSVMGHHLKKEQHQFFIHITESCTGPNDTARRNALKVLREDASICRILPEL 492
Query: 321 CTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCG 380
C FIA+ V +NVV NL LL YLM+MV L N +L ++ +LH L+P++++C V+ +L
Sbjct: 493 CRFIADAVNLNVVLKNLTLLSYLMQMVAILHCNANLRIQPFLHLLIPAVVTCQVANKL-S 551
Query: 381 RPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ HW LR++A ++ Q+ F STN + R+ + + + K + ++YG++ G
Sbjct: 552 TAKDKYHWQLREYACEIMGQLINKFANSTNRMVPRLMNVYKSGLE--KSSLTTIYGSLIG 609
>gi|396082306|gb|AFN83916.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
romaleae SJ-2008]
Length = 356
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 157/309 (50%), Gaps = 41/309 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL DI+ AL +N++P++G + L F+ G +++ ++E+D E
Sbjct: 45 KFMVGSKRTKLSIDDINYALISRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L +++HWLAIEGVQP +P NP ++K P++K KDT
Sbjct: 102 EYLDRPLPKIPLRPSIQSHWLAIEGVQPQIPYNPILLEK---------PVAK-----KDT 147
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G E +K H L+ E +Y+ ++ +A + +DE A++ L
Sbjct: 148 LGTYQ----------EEAELKSQNRHMLTKELGMYFDKVIQA-METDEQI---AMECLHN 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P E + N+ N L+ ++ + +LL N+ ++++ YLH++LPS+
Sbjct: 194 ESGIQQLVPYFVHHFNEQIMKNI--KNKERLMTVIMVYNSLLRNKYIFIDPYLHQVLPSL 251
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKI 429
++C++ K + D+ +R A+ ++ V NF+ S + R+ LS A D +
Sbjct: 252 ITCVIGKSV------DDE--VRRVAADVVKYVFSNFSGSYKTLAPRIINTLSKAWLDKEK 303
Query: 430 NFPSLYGAI 438
+ YGA+
Sbjct: 304 TESTQYGAL 312
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E++K A+S GI N+ DDA + LS ++ Y K + Q
Sbjct: 3 FSKETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L F+ G +++ ++E+D E+ L PK L +++
Sbjct: 63 ALISRNVDPLFGYDPQESLVFR---GLPSNVYYVPDEEIDLEEYLDRPLPKIPLRPSIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESI 127
HWLAIEGVQP +P NP ++K K +++
Sbjct: 120 HWLAIEGVQPQIPYNPILLEKPVAKKDTL 148
>gi|378756081|gb|EHY66106.1| transcription initiation factor TFIID 70kda subunit [Nematocida sp.
1 ERTm2]
Length = 384
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 155/327 (47%), Gaps = 45/327 (13%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M SKR KL D++ AL K I+P+ G S L FK S G L++ ++E+D
Sbjct: 43 SSKFMIASKRSKLSIEDVNYALLSKEIDPLLGYNTSNSLMFK--SIPGSNLYYVPDEELD 100
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
E +LT+ PK + + HWLAIEGVQP +P+NP P+++ + ++ K+D
Sbjct: 101 LESILTSPLPKIPQKPVISKHWLAIEGVQPQIPQNPLPMER----------MPEIKKEDT 150
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
+ K E + ++ H LS E QLYY++I + + E A + L
Sbjct: 151 LAAMK------------EDIEIRNHMKHLLSKELQLYYEKIVQ-FIKEKETVSI-ASECL 196
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
+ G+ +++P F E + N+ N L+ ++ + ++L+ N+ +++E Y+H++LP
Sbjct: 197 KNESGIQQLIPYFVHFFNEEILKNL--RNGEYLVDIITVYESLIMNKMIFIEPYMHQMLP 254
Query: 368 SILSCIVSKQLCGRPEADNHWA----------------LRDFASRLLTQVSKNFNTSTNN 411
S+L+C+V K + G D A R AS + + ++ S
Sbjct: 255 SLLTCVVGKSI-GLDSRDGARAEDGAGSTANEDAPGLSARRRASATIKHIYDTYSLSYTT 313
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAI 438
+ RV L D S YGAI
Sbjct: 314 LAPRVLNTLLKTWADGAKTPESHYGAI 340
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 31/141 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FSIE++K A+S GIP + D+ K L+ ++ Y K + Q
Sbjct: 3 FSIETLKAYAQSKGIPEIEDEDLKILAQDLEYRLKELAQESSKFMIASKRSKLSIEDVNY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P+ G S L FK S G L++ ++E+D E +LT+ PK + +
Sbjct: 63 ALLSKEIDPLLGYNTSNSLMFK--SIPGSNLYYVPDEELDLESILTSPLPKIPQKPVISK 120
Query: 99 HWLAIEGVQPTVPENPPPVDK 119
HWLAIEGVQP +P+NP P+++
Sbjct: 121 HWLAIEGVQPQIPQNPLPMER 141
>gi|320589938|gb|EFX02394.1| transcription initiation factor tfiid complex subunit [Grosmannia
clavigera kw1407]
Length = 535
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 22/256 (8%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M R L D+ AL + ++EP+YG ++ L + AS G G+ L + +++EV
Sbjct: 55 ALRFMRAGGRTTLTVQDMSLALRVLDVEPLYGYESTRPLRYGEASLGPGQPLFYVEDEEV 114
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+FE L+ P+ + L HWLAIEGVQP +P+NP + +Q+L + K
Sbjct: 115 EFERLVNAPLPRVPRDASLTAHWLAIEGVQPAIPQNPTTAEARSQEL-----VPK----- 164
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RF 301
G + L L + V K H +S E LY+ +I A + + R
Sbjct: 165 ----GPGANPALAALAGNDNVGFKPAIKHIISNELVLYFDKIQAAVLDDNPDEEVLRLRD 220
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
AL S+ +DPGLH+++P FIA ++ +++ L M + AL+ N L+L+ Y
Sbjct: 221 AALDSVRSDPGLHQLVPYFVNFIAN--QITHRMDDVFALRRTMELTSALVANPHLFLDPY 278
Query: 362 LHELLPSILSCIVSKQ 377
L +L+C+V+++
Sbjct: 279 ASPLCAPVLTCLVARR 294
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 30/144 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII------------------------- 45
E+++ +AES+G+ L DDA + LS ++ Y +I
Sbjct: 18 ENVRDVAESVGVSQLADDALRCLSQDVEYRIGQVIVEALRFMRAGGRTTLTVQDMSLALR 77
Query: 46 ----QPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
+P+YG ++ L + AS G G+ L + +++EV+FE L+ P+ + L HW
Sbjct: 78 VLDVEPLYGYESTRPLRYGEASLGPGQPLFYVEDEEVEFERLVNAPLPRVPRDASLTAHW 137
Query: 101 LAIEGVQPTVPENPPPVDKSAQKL 124
LAIEGVQP +P+NP + +Q+L
Sbjct: 138 LAIEGVQPAIPQNPTTAEARSQEL 161
>gi|269859744|ref|XP_002649596.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
gi|220066959|gb|EED44428.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
Length = 354
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 42/301 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M S R KL D+++AL +N+EP++G + L FK G +F ++E+D E
Sbjct: 45 KFMHASHRKKLNTSDVNNALISRNVEPLFGYESQEILIFK---GLPSNSYFVPDEEIDLE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L ++++HWLAIEGVQP + +NP +++ K DPIS
Sbjct: 102 EYLDKPLPKIPLRPYIQSHWLAIEGVQPPIQQNPIILERQQPK---NDPISNFQ------ 152
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
E + +K+ H L+ E +Y+++I + + +D E L++
Sbjct: 153 ---------------EEMIIKKQIKHRLTKELNMYFEKILQV-METDPSISMECLEN--- 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P ++ N+ A I LM +LL N+ L+++ YLHE+LPS+
Sbjct: 194 ETGIQQLVPYFIHQFNTDIRNNIGNTLKAKTICLMYF--SLLKNKFLFIDPYLHEILPSL 251
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA-INDPK 428
LSC+V K + +RD A ++ V NF+ + + R+ L +A +N+ K
Sbjct: 252 LSCVVGKSVSH--------DVRDVAIDVIKYVYDNFSCNYLTLAPRIVNTLKSAWLNEEK 303
Query: 429 I 429
I
Sbjct: 304 I 304
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 32/150 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS +++K A S GI N+ +++ + LS ++ Y K + Q
Sbjct: 3 FSKDTLKSFAASKGIENIEEESYRILSQDLEYRIKEVCQEAAKFMHASHRKKLNTSDVNN 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L FK G +F ++E+D E+ L PK L ++++
Sbjct: 63 ALISRNVEPLFGYESQEILIFK---GLPSNSYFVPDEEIDLEEYLDKPLPKIPLRPYIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
HWLAIEGVQP + +NP +++ K + IS
Sbjct: 120 HWLAIEGVQPPIQQNPIILERQQPKNDPIS 149
>gi|392579185|gb|EIW72312.1| hypothetical protein TREMEDRAFT_70674 [Tremella mesenterica DSM
1558]
Length = 486
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 57/337 (16%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIY----GLTVSQFLPFKHASGGGRELH---FTD 182
K M H+KR L D++ A+ + N+EPI L F + + G H +
Sbjct: 51 KFMVHAKRTTLTSDDVEYAMEVLNLEPILVPPRPLPQPTFAQVQIPTVSGNSTHTIYYAP 110
Query: 183 EKEVDFEDLLTNLNP---KSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ E+DF L P S+ + HWLA+EGVQP +PENP P + +++S P+
Sbjct: 111 DDEIDFATYLKQPLPPGLASSAGVKWKAHWLAVEGVQPAIPENPAP----SARVDSTSPL 166
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG----- 294
+ L + + ++ A L E QLY+ +T A V
Sbjct: 167 T--------------------LPSTGSAALRPSARSHLPQELQLYFGRLTAAIVPSTSPP 206
Query: 295 -------SD-EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRM 346
SD E +R AL SL D + +L + +IAE V+ + + + +L YL+
Sbjct: 207 PSPDGTISDVERQRLAALASLRGDQAVGGILVYLVKWIAESVQ-KCLMSPVQVLGYLLDA 265
Query: 347 VKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNH-----WALRDFASRLLTQV 401
++ALLDN+++++E YLH+LL ++S +++ L P + + R AS +L ++
Sbjct: 266 MEALLDNEAVFVEPYLHQLLAPLMSILLTVPLGPHPPTSSQQITAAYETRLRASDVLRKI 325
Query: 402 SKNFNTSTNNIQTRVTRLLSNAI-NDPKINFPSLYGA 437
++++S N+ R+ LS A+ +DP FPS GA
Sbjct: 326 VDDYSSSYPNLTPRLLSTLSQALQSDP---FPSPLGA 359
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 34 SDNITYCCKV-----IIQPIYGLTVSQFLPFKHASGGGRELH---FTDEKEVDFEDLLTN 85
SD++ Y +V I+ P L F + + G H + + E+DF L
Sbjct: 63 SDDVEYAMEVLNLEPILVPPRPLPQPTFAQVQIPTVSGNSTHTIYYAPDDEIDFATYLKQ 122
Query: 86 LNP---KSALETHLRTHWLAIEGVQPTVPENPPP 116
P S+ + HWLA+EGVQP +PENP P
Sbjct: 123 PLPPGLASSAGVKWKAHWLAVEGVQPAIPENPAP 156
>gi|321258761|ref|XP_003194101.1| hypothetical protein CGB_E0240C [Cryptococcus gattii WM276]
gi|317460572|gb|ADV22314.1| Hypothetical protein CGB_E0240C [Cryptococcus gattii WM276]
Length = 522
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 154/333 (46%), Gaps = 45/333 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIY----GLTVSQF----LPFKHASGGGRELHFT 181
K M H+KR L+P D++ AL N+EPI L + F LP A+ + ++ T
Sbjct: 52 KFMVHAKRSTLMPEDVEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPSQTIYTT 111
Query: 182 DEKEVDFEDLLTNLNPK---SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
+ E+DF L P S+ + HWLA+EGVQP VPENP P SI P
Sbjct: 112 PDDEIDFVSYLKEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAP--------SSIHP 163
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV----- 293
+ G + G P A + +K A L E QLY+ +T A V
Sbjct: 164 GAGAGSSGQRVKGAPAPA---------STTLKPSARAHLPQELQLYFTRLTTALVPPATT 214
Query: 294 ---GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
E R AL SL D + ML + ++ E ++ + A + +L+ V AL
Sbjct: 215 LPESEPERHRLAALASLRNDVAVAGMLVYVVKWLCESIQ-KCLMAPTASIGHLVDAVGAL 273
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWA------LRDFASRLLTQVSKN 404
L N+ L++E Y+H+LLP +LS I++ L P + +R AS +L++++
Sbjct: 274 LANEGLFIEPYMHQLLPPLLSIILTVPLGPHPPQPASLSQPSPTEIRSRASDVLSKIAST 333
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
++ S + R+ L+ A++ P FPS GA
Sbjct: 334 YSPSYPGLIPRLVMTLTRALHSPP--FPSPLGA 364
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 44/156 (28%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M IY + ES++ +A+S+ + L AA L+ ++ Y +I+Q
Sbjct: 7 MGIYPS----ESIQEVAQSLPLDALGPGAATLLAGDVEYRLHLILQEAKKFMVHAKRSTL 62
Query: 47 -------------------PIYGLTVSQF----LPFKHASGGGRELHFTDEKEVDFEDLL 83
P L + F LP A+ + ++ T + E+DF L
Sbjct: 63 MPEDVEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPSQTIYTTPDDEIDFVSYL 122
Query: 84 TNLNPK---SALETHLRTHWLAIEGVQPTVPENPPP 116
P S+ + HWLA+EGVQP VPENP P
Sbjct: 123 KEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAP 158
>gi|387594002|gb|EIJ89026.1| transcription initiation factor TFIID 70kda subunit [Nematocida
parisii ERTm3]
gi|387595796|gb|EIJ93419.1| transcription initiation factor TFIID 70kda subunit [Nematocida
parisii ERTm1]
Length = 381
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 153/322 (47%), Gaps = 41/322 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M +KR KL D++ AL K I+P+ G S L FK G L++ ++E+D E
Sbjct: 45 KFMMAAKRSKLSIEDVNYALLSKEIDPLLGYNTSNSLVFKTIPGSN--LYYVPDEELDLE 102
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+L + PK + + HWLAIEGVQP +P+NP P+++ + ++ K+D
Sbjct: 103 SILNSPLPKIPHKPVISKHWLAIEGVQPQIPQNPLPMER----------MPEIKKEDTLA 152
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
+ K E + ++ H LS E QLYY++I + D+ A + L
Sbjct: 153 AMK------------EDIEIRNHMKHLLSKELQLYYEKIVQFI--KDKETVALASECLKN 198
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
+ G+ +++P F E + N+ N L+ ++ + ++L+ N+ +++E Y+H++LPS+
Sbjct: 199 ESGIQQLIPYFVHFFNEEILKNL--RNGDYLVDIISVYESLIMNKMIFIEPYMHQMLPSL 256
Query: 370 LSCIVSKQ------------LCGRPEADN-HWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
L+C+V K L + D + R AS + + ++ S + RV
Sbjct: 257 LTCVVGKSIGIMHKHPSEEVLVNDSDEDTPGLSARRRASITIKYIYDTYSLSYTTLAPRV 316
Query: 417 TRLLSNAINDPKINFPSLYGAI 438
L D + S YGAI
Sbjct: 317 LNTLLKTWADSTKSPESHYGAI 338
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 31/141 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FSIE++K +S GIP++ D+ K L+ ++ Y K + Q
Sbjct: 3 FSIETLKAYTQSKGIPDIEDEDLKILAQDLEYRLKELAQEASKFMMAAKRSKLSIEDVNY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P+ G S L FK G L++ ++E+D E +L + PK + +
Sbjct: 63 ALLSKEIDPLLGYNTSNSLVFKTIPGSN--LYYVPDEELDLESILNSPLPKIPHKPVISK 120
Query: 99 HWLAIEGVQPTVPENPPPVDK 119
HWLAIEGVQP +P+NP P+++
Sbjct: 121 HWLAIEGVQPQIPQNPLPMER 141
>gi|321457768|gb|EFX68848.1| hypothetical protein DAPPUDRAFT_259553 [Daphnia pulex]
Length = 117
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 258 LEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEML 317
L +L N++ VKQL T +LSVEQQLYYK+ITE CV SD+ RR EA QSLA+DPGLHEML
Sbjct: 42 LRQLTNLKQKQVKQL-TAQLSVEQQLYYKKITEKCVCSDQARRAEAFQSLASDPGLHEML 100
Query: 318 PRMCTFIAEGVKVNV 332
PR+CTFIAEGV+VN+
Sbjct: 101 PRLCTFIAEGVRVNL 115
>gi|429963235|gb|ELA42779.1| hypothetical protein VICG_00094 [Vittaforma corneae ATCC 50505]
Length = 353
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 44/305 (14%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEK 184
E+ F +SH R KL D+++AL +N+EP++G + L F+ G + ++
Sbjct: 42 EASKFMVVSH--RTKLNIGDVNNALISRNVEPLFGYDSNDTLVFRGLPSG---FYCVPDE 96
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
E+D E+ L PK L+ ++++HWLAIEGVQP + +NP ++K A K +S+
Sbjct: 97 EIDLEEYLEKPLPKIPLKPYVQSHWLAIEGVQPPIQQNPILIEKPAAKQDSLSMYQ---- 152
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEAL 304
E + +KQ H L+ E +Y+++I + E A+
Sbjct: 153 --------------------EDLELKQQNKHLLTKELSMYFEKILQTMETDPET----AI 188
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
L + G+ +++P ++ N N LL +++M +LL N+ ++++ YLHE
Sbjct: 189 SCLLNETGIQQLVPYFLHHFKLVIRKNF--ENDELLAVIVKMYGSLLKNKYIFIDPYLHE 246
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTR-VTRLLSNA 423
+LP +LSC+V K + R A+ L+ + F+ ++ +R V+ LL
Sbjct: 247 ILPPLLSCVVGKSISEEA--------RRLATDLIKYIFDVFSPKYKSLPSRIVSFLLKGW 298
Query: 424 INDPK 428
++D K
Sbjct: 299 LDDSK 303
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 32/150 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E+++ A+S GI ++ DDA + LS ++ Y K + Q
Sbjct: 3 FSKETLRAFAQSRGISSIDDDALRILSQDLEYRIKELCQEASKFMVVSHRTKLNIGDVNN 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G + L F+ G + ++E+D E+ L PK L+ ++++
Sbjct: 63 ALISRNVEPLFGYDSNDTLVFRGLPSG---FYCVPDEEIDLEEYLEKPLPKIPLKPYVQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
HWLAIEGVQP + +NP ++K A K +S+S
Sbjct: 120 HWLAIEGVQPPIQQNPILIEKPAAKQDSLS 149
>gi|444313621|ref|XP_004177468.1| hypothetical protein TBLA_0A01500 [Tetrapisispora blattae CBS 6284]
gi|387510507|emb|CCH57949.1| hypothetical protein TBLA_0A01500 [Tetrapisispora blattae CBS 6284]
Length = 589
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 141/315 (44%), Gaps = 65/315 (20%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFL---------PFKHASGGG---RE 177
K H+KR L DI +L + N+EP+YG Q L F G R
Sbjct: 54 KFKRHAKRNVLSTNDIAKSLTVLNVEPLYGYHNHQVLNGHSNQSSIGFTRCQVPGAPDRP 113
Query: 178 LHF-TDEKEVDFEDLLTN-LNPKSALETHLRTHWLAIEGVQPTVPENP---------PPV 226
++F + ++E D E LL L P L T HWLA+EGVQP +P+NP PP
Sbjct: 114 VYFISGDEEADLEKLLQQPLPPIPRLPT-FSAHWLAVEGVQPAIPQNPRLQEIRMAQPPA 172
Query: 227 DKSA--------------------------QKLESIDPISKLGKKDKDT--------SGK 252
+ A L+ D + G + S +
Sbjct: 173 IRGAIVTALNDNSIHAEGDNGTGSGTGSTNNVLDGPDSSTIAGANNSINGLSNPNIQSSR 232
Query: 253 PTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-----RFEALQSL 307
P K + +K L H LS E QLY+ ++ EA S R AL SL
Sbjct: 233 PRVTSRVKPGSHSNTQLKPLVRHVLSRELQLYFDKVVEALTSSSSSPDSSHLRSAALTSL 292
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
TD GLH+++P FIAE + ++ N+L LL ++ M+ +LL N+S++L+ Y+H L+P
Sbjct: 293 RTDSGLHQLVPYFIQFIAEQITHHL--NDLDLLTSILEMIYSLLSNESIFLDPYIHSLMP 350
Query: 368 SILSCIVSKQLCGRP 382
SIL+ +++K+L P
Sbjct: 351 SILTLLLAKKLGTPP 365
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 48/156 (30%)
Query: 6 TSFSI----ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------- 46
TS+++ ++++ +AES+GI N+P+D K L+ ++ Y II+
Sbjct: 6 TSYTLWSPQDTVQDVAESLGIDNVPEDVLKALAMDVEYRILEIIEQAAKFKRHAKRNVLS 65
Query: 47 --------------PIYGLTVSQFL---------PFKHASGGG---RELHF-TDEKEVDF 79
P+YG Q L F G R ++F + ++E D
Sbjct: 66 TNDIAKSLTVLNVEPLYGYHNHQVLNGHSNQSSIGFTRCQVPGAPDRPVYFISGDEEADL 125
Query: 80 EDLLTN-LNPKSALETHLRTHWLAIEGVQPTVPENP 114
E LL L P L T HWLA+EGVQP +P+NP
Sbjct: 126 EKLLQQPLPPIPRLPT-FSAHWLAVEGVQPAIPQNP 160
>gi|299115204|emb|CBN74035.1| transcription initiation factor TFIID subunit 6 [Ectocarpus
siliculosus]
Length = 578
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 141/340 (41%), Gaps = 60/340 (17%)
Query: 133 SHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEK-----EVD 187
+ KR +L D+ +L ++ E G V SGGG + +D+ +VD
Sbjct: 48 ARGKRSRLTVDDVTASLELRGAE---GSLV--------CSGGGSKSKDSDDSATADGKVD 96
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
+ P +E HWLA++G QP +P+NP P + K
Sbjct: 97 LRKVANATLPVCPIEPGFHMHWLAVDGQQPLLPQNPLPSSG----------------RGK 140
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
SGK K + LS E Y + +A + DE +R AL SL
Sbjct: 141 GKSGKRGRGKQGGGGAGGSGGGSSAVRARLSEELTTYLRRCCDAILSRDEPKRSRALASL 200
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNV-VQNNLALLIYLMRMVKALLDNQSL-YLEKYLHEL 365
DPGL ++LP +CTFI V + Q L L++M++ LL+N++ +LE YL L
Sbjct: 201 REDPGLQQLLPHLCTFIQTKVPEYLKRQKEPDQLAALLQMLQCLLNNKNFAFLEIYLDRL 260
Query: 366 LPSILSCIV------------------SKQLCG-------RPEADNHWALRDFASRLLTQ 400
LP ++SC++ S G RP+ HW +RD+A+ LL
Sbjct: 261 LPPLMSCLLHIDFERAGLDTGGSANSDSSSFGGMGVHSAARPKW-THWDVRDYAAELLRA 319
Query: 401 VSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ + +Q R + + PK +LYGAI G
Sbjct: 320 ICDKHGNTYPTLQARANDMFDTHVARPKTRLTTLYGAITG 359
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 63 SGGGRELHFTDEK-----EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP 116
SGGG + +D+ +VD + P +E HWLA++G QP +P+NP P
Sbjct: 76 SGGGSKSKDSDDSATADGKVDLRKVANATLPVCPIEPGFHMHWLAVDGQQPLLPQNPLP 134
>gi|300701912|ref|XP_002995057.1| hypothetical protein NCER_102196 [Nosema ceranae BRL01]
gi|239603739|gb|EEQ81386.1| hypothetical protein NCER_102196 [Nosema ceranae BRL01]
Length = 353
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 152/318 (47%), Gaps = 43/318 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M SKR KL DI+ L +N++P++G L FK G + + ++E+D E
Sbjct: 45 KFMLASKRTKLSIEDINYGLISRNVDPLFGYDPQDNLVFKGLPSG---IFYVPDEELDIE 101
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
+ L PK L T +++HWLAIEGVQP +NP + K+ QK KDT
Sbjct: 102 EYLERPLPKIPLNTSIQSHWLAIEGVQPQTAQNPILIQKTEQK--------------KDT 147
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
+ E +K H L+ E +Y+++I + + +DE A++ L
Sbjct: 148 L----------ITYQEETELKSQNKHILTKELNMYFEKIIQT-METDEDI---AIECLKN 193
Query: 310 DPGLHEMLPRMCTFIAEGVKVNV-VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+ G+ +++P + + N+ V L +I M +LL+NQ ++++ YLH++LPS
Sbjct: 194 ESGIQQLVPYFIHHFNQQIIKNLKVTEKLKTVI---MMYNSLLNNQYIFIDPYLHQILPS 250
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+L+C+V K + ++R +S ++ V NF + + R+ LS D
Sbjct: 251 LLTCVVGKSVDD--------SVRYLSSDVIKFVYDNFASKYKTLGPRIISTLSKTWLDKD 302
Query: 429 INFPSLYGAIAGEGLVTE 446
N GA+ G++++
Sbjct: 303 KNENVQLGALRCLGILSQ 320
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 32/149 (21%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS+E++K A+S+GI N+ DDA + LS ++ Y K I Q
Sbjct: 3 FSLETLKSYAQSVGITNIDDDALRILSQDLEYRIKEICQEGSKFMLASKRTKLSIEDINY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G L FK G + + ++E+D E+ L PK L T +++
Sbjct: 63 GLISRNVDPLFGYDPQDNLVFKGLPSG---IFYVPDEELDIEEYLERPLPKIPLNTSIQS 119
Query: 99 HWLAIEGVQPTVPENPPPVDKSAQKLESI 127
HWLAIEGVQP +NP + K+ QK +++
Sbjct: 120 HWLAIEGVQPQTAQNPILIQKTEQKKDTL 148
>gi|196004762|ref|XP_002112248.1| hypothetical protein TRIADDRAFT_23396 [Trichoplax adhaerens]
gi|190586147|gb|EDV26215.1| hypothetical protein TRIADDRAFT_23396 [Trichoplax adhaerens]
Length = 154
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 4/121 (3%)
Query: 117 VDKSAQKLESI---SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG 173
D+ + L++I S K M HS+R KL P DID AL ++N EP+YG T F+PF++ASG
Sbjct: 34 ADEVSANLKAIIQDSMKFMRHSRRSKLTPDDIDLALKLRNREPLYGFTSRDFVPFRYASG 93
Query: 174 GGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQK 232
GR LHF ++E++ + L +L P+ +++++R+HWL++EG QP + ENP P + K
Sbjct: 94 QGRRLHFQPDEELNLTEFLESLQVPQVPIDSYVRSHWLSVEGTQPLIQENPDPGNDKYFK 153
Query: 233 L 233
L
Sbjct: 154 L 154
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M +SFS +S++ IAES G+ + DD + ++D ++ K IIQ
Sbjct: 1 MSEINSSFSKQSVQAIAESCGVMPIEDDCYQVIADEVSANLKAIIQDSMKFMRHSRRSKL 60
Query: 47 ---------------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKS 90
P+YG T F+PF++ASG GR LHF ++E++ + L +L P+
Sbjct: 61 TPDDIDLALKLRNREPLYGFTSRDFVPFRYASGQGRRLHFQPDEELNLTEFLESLQVPQV 120
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKL 124
+++++R+HWL++EG QP + ENP P + KL
Sbjct: 121 PIDSYVRSHWLSVEGTQPLIQENPDPGNDKYFKL 154
>gi|405120527|gb|AFR95297.1| transcription initiation factor TFIID complex 60 kDa subunit
[Cryptococcus neoformans var. grubii H99]
Length = 520
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 150/333 (45%), Gaps = 47/333 (14%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIY----GLTVSQF----LPFKHASGGGRELHFT 181
K M H+KR L+P D++ AL N+EPI L + F LP A+ + ++ T
Sbjct: 52 KFMVHAKRSTLMPEDVEHALEALNVEPILIPPRPLAIPSFHPLNLPPPAANMPPQTIYTT 111
Query: 182 DEKEVDFEDLLTNLNPK---SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
+ E+DF L P S+ + HWLA+EGVQP VPENP P A
Sbjct: 112 PDDEIDFASYLKEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHAGA------ 165
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV----- 293
G + G P A + +K A L E QLY+ +T A V
Sbjct: 166 ----GAGGQRVKGAPAPA---------STTLKPSARAHLPQELQLYFTRLTTALVPPTAT 212
Query: 294 ---GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
E R AL SL D + ML + ++ E ++ + A + +L+ V AL
Sbjct: 213 LPESEPERHRLAALASLRNDVAVAGMLVYVVKWLCESIQ-KCLMAPTASIGHLVDAVGAL 271
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWA------LRDFASRLLTQVSKN 404
L N+ L++E Y+H+LLP +LS I++ L P + +R AS +L++++
Sbjct: 272 LANEGLFIEPYMHQLLPPLLSIILTVPLGPHPPQSAASSQPSPTEIRSRASDVLSKIAST 331
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
F+ S + R+ + A++ P FPS GA
Sbjct: 332 FSPSYPGLIPRLVSTFTKALHSPP--FPSPLGA 362
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 52/190 (27%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M IY + ES++ +A+S+ + L AA L+ ++ Y +I+Q
Sbjct: 7 MGIYPS----ESIQEVAQSLPLDPLGPGAATLLAGDVEYRLHLILQEAKKFMVHAKRSTL 62
Query: 47 -------------------PIYGLTVSQF----LPFKHASGGGRELHFTDEKEVDFEDLL 83
P L + F LP A+ + ++ T + E+DF L
Sbjct: 63 MPEDVEHALEALNVEPILIPPRPLAIPSFHPLNLPPPAANMPPQTIYTTPDDEIDFASYL 122
Query: 84 TNLNPK---SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKL 140
P S+ + HWLA+EGVQP VPENP P SI + +RVK
Sbjct: 123 KEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAP--------SSIHAGAGAGGQRVKG 174
Query: 141 LPVDIDDALN 150
P L
Sbjct: 175 APAPASTTLK 184
>gi|402590123|gb|EJW84054.1| hypothetical protein WUBG_05035, partial [Wuchereria bancrofti]
Length = 290
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 346 MVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNF 405
M+++L +N +L LE+ LHELLPS+LSCI+S+QLC RPE DNHWALR+F+SRLL + +++
Sbjct: 1 MIQSLANNPALSLERCLHELLPSVLSCILSRQLCARPETDNHWALREFSSRLLANICRSY 60
Query: 406 NTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
N N++++RVT++L+ D +LYG++
Sbjct: 61 N--INHLRSRVTQVLAQVWRDESCTLAALYGSL 91
>gi|58267138|ref|XP_570725.1| hypothetical protein CNE00290 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111533|ref|XP_775302.1| hypothetical protein CNBE0210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257961|gb|EAL20655.1| hypothetical protein CNBE0210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226959|gb|AAW43418.1| hypothetical protein CNE00290 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 520
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIY----GLTVSQF----LPFKHASGGGRELHFT 181
K M H+KR L+P D++ AL N+EPI L + F LP A+ + ++ T
Sbjct: 52 KFMVHAKRSTLMPEDVEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPPQTIYTT 111
Query: 182 DEKEVDFEDLLTNLNPK---SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
+ E+DF L P S+ + HWLA+EGVQP VPENP P A
Sbjct: 112 TDDEIDFASYLKEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHAGA------ 165
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV----- 293
G + G P A + +K A L E QLY+ +T A V
Sbjct: 166 ----GGGAQRVKGAPAPA---------STTLKPSARAHLPQELQLYFTRLTTALVPPTAT 212
Query: 294 ---GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
E R AL SL D + ML + ++ E ++ + A + +L+ V AL
Sbjct: 213 LPESEPERHRLAALASLRNDVAVAGMLVYVVKWLCESIQ-KCLMAPTASIGHLVDAVGAL 271
Query: 351 LDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWA------LRDFASRLLTQVSKN 404
L N+ L++E Y+H+LLP +LS I++ L P + +R AS +L++++
Sbjct: 272 LANEGLFIEPYMHQLLPPLLSIILTVPLGPHPPQPASSSQPSPTEIRSRASDVLSKIAST 331
Query: 405 FNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
++ S + R+ L+ A++ P FPS GA
Sbjct: 332 YSPSYPGLIPRLVSTLTKALHSPP--FPSPLGA 362
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 52/190 (27%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ-------------- 46
M IY + ES++ +A+S+ + L AA L+ ++ Y +I+Q
Sbjct: 7 MGIYPS----ESIQEVAQSLPLDPLGPGAATLLAGDVEYRLHLILQEAKKFMVHAKRSTL 62
Query: 47 -------------------PIYGLTVSQF----LPFKHASGGGRELHFTDEKEVDFEDLL 83
P L + F LP A+ + ++ T + E+DF L
Sbjct: 63 MPEDVEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPPQTIYTTTDDEIDFASYL 122
Query: 84 TNLNPK---SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKL 140
P S+ + HWLA+EGVQP VPENP P SI ++RVK
Sbjct: 123 KEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAP--------SSIHAGAGGGAQRVKG 174
Query: 141 LPVDIDDALN 150
P L
Sbjct: 175 APAPASTTLK 184
>gi|16648300|gb|AAL25415.1| LD25013p [Drosophila melanogaster]
Length = 260
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 71/100 (71%)
Query: 263 NVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCT 322
VE V +K + LS+EQQ +++ +TEACVG E RR AL++++TDP L E+LPR+
Sbjct: 157 KVEQVLLKPSKRYPLSMEQQNFFELVTEACVGDLESRRVLALKAISTDPSLEELLPRLTK 216
Query: 323 FIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
FIA+ V +NV Q NL LL+YLMRMV+ALL NQ L +Y+
Sbjct: 217 FIADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYV 256
>gi|389740215|gb|EIM81406.1| TAF-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 502
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 135/265 (50%), Gaps = 32/265 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT------VSQFLPFKHASGGGRELHFT 181
+ + M H++R L DID AL + NIEP+YG T + LPF G ++F
Sbjct: 58 AARFMRHARRTSLTTNDIDQALRVLNIEPLYGHTPHNPPSFRRALPFPTLPAAG-SVYFL 116
Query: 182 DEKEVDFEDLLTNLNPKSALE-THLRTHWLAIEGVQPTVPENPPPVDK-----SAQKLES 235
+++E+DF+ +L + HWLA+EGVQP +PENPP + K QK
Sbjct: 117 EDEEIDFDRVLKEERLSTGNNGVRWTAHWLAVEGVQPLIPENPPAIPKDEPGAGTQKNGV 176
Query: 236 IDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG- 294
++ +G+ + G A + + + VKQ+ + EL QLY+ +T + +
Sbjct: 177 NGLVAGMGQSTPTSPGARRLAASQHSQQQQQQLVKQVLSREL----QLYHARLTSSLLSP 232
Query: 295 ----SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN---------NLALLI 341
+D+ +R AL SL D GL +LP + ++AEGV + + L +
Sbjct: 233 SSTTADQTKRTAALASLRHDAGLQPLLPYLVRWVAEGVIAILKEGPDSGEGDETGRVLEV 292
Query: 342 YLMRMVKALLDNQSLYLEKYLHELL 366
YL +++ ALLDNQ+L++E YLH+LL
Sbjct: 293 YL-QVIAALLDNQTLFVEPYLHQLL 316
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 37/148 (25%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITY---------------------------- 39
+ ES+K +AES+GI NL + A L+ ++ Y
Sbjct: 18 YKAESVKDVAESLGITNLSESVASNLASDVEYRLHQVIEEAARFMRHARRTSLTTNDIDQ 77
Query: 40 CCKVI-IQPIYGLT------VSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSAL 92
+V+ I+P+YG T + LPF G ++F +++E+DF+ +L +
Sbjct: 78 ALRVLNIEPLYGHTPHNPPSFRRALPFPTLPAAG-SVYFLEDEEIDFDRVLKEERLSTGN 136
Query: 93 E-THLRTHWLAIEGVQPTVPENPPPVDK 119
HWLA+EGVQP +PENPP + K
Sbjct: 137 NGVRWTAHWLAVEGVQPLIPENPPAIPK 164
>gi|156405270|ref|XP_001640655.1| predicted protein [Nematostella vectensis]
gi|156227790|gb|EDO48592.1| predicted protein [Nematostella vectensis]
Length = 375
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 52/310 (16%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M H KR ++ D++ A+ + N+EP+YG + +PF+ S ++ F DEKE+ +L
Sbjct: 58 MKHGKRRRMTTEDLNRAMQLTNVEPVYGYGSGEDMPFRSTSTKEGDVFFVDEKEIGIREL 117
Query: 192 LTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD-KSAQKLESIDPISKLGKKDKDTS 250
AL T VP +P V + ++ + LG K
Sbjct: 118 --------ALST--------------AVPTDPGKVSVRGKYEMYFTVHATVLGCSSK--- 152
Query: 251 GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATD 310
++A LE YY++IT+A +G + R A L ++
Sbjct: 153 AAISTAGLE------------------------YYEQITKAVLGESDVCRRMAFSDLQSN 188
Query: 311 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
P + + P +FIA GVK ++L L L+ MV AL DN SL+L+ Y+ +L+ +++
Sbjct: 189 PKISCIFPYFVSFIASGVKS--CSHDLKQLSRLLGMVSALTDNSSLFLDPYVIQLVTAVM 246
Query: 371 SCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKIN 430
C++ ++HW LR A+ +L +S+ + N + ++ L + D
Sbjct: 247 YCLLETLTVSLNPVNDHWRLRRDAACILAFLSRKCSNPVNYLHQQLLMTLREVLTDESRP 306
Query: 431 FPSLYGAIAG 440
+ S +GA+ G
Sbjct: 307 YCSHFGAVVG 316
>gi|355723129|gb|AES07792.1| TAF6 RNA polymerase II, TATA box binding protein -associated
factor, 80kDa [Mustela putorius furo]
Length = 93
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%)
Query: 155 EPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 214
EP+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ HWL+IEG
Sbjct: 1 EPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEG 60
Query: 215 VQPTVPENPPPVDKSAQKLESIDPI 239
QP +PENPPP K QK E+ +P+
Sbjct: 61 CQPAIPENPPPAPKEQQKAEATEPL 85
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 46 QPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEG 105
+P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+ L+ L+ HWL+IEG
Sbjct: 1 EPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEG 60
Query: 106 VQPTVPENPPPVDKSAQKLES 126
QP +PENPPP K QK E+
Sbjct: 61 CQPAIPENPPPAPKEQQKAEA 81
>gi|327290084|ref|XP_003229754.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Anolis
carolinensis]
Length = 617
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 133/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E + G LPF+ G EL+F +++E++
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQDPLPFRTLKEG--ELYFQEDREIN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P SA
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLEPQGSVPSAVSA---------------- 152
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
L+ + YY+ +T A +G D ALQ
Sbjct: 153 ------------------------------LTDDLLKYYQHVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+P + +LP ++ GVK V ++L L L+ + ++L+ N LYL Y+ L+
Sbjct: 183 LQTNPKIAALLPYF-VYVVSGVKS--VSHDLEQLSRLLHVARSLIQNPYLYLGSYVKSLI 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S++ C++ ++HW LRD+A+ LL + + + ++ L ++D
Sbjct: 240 ASVMYCVLEPLAASINPLNDHWTLRDYAAMLLGHIFRTHGDLVGGLFPQILLSLQKVLSD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|164655815|ref|XP_001729036.1| hypothetical protein MGL_3824 [Malassezia globosa CBS 7966]
gi|159102925|gb|EDP41822.1| hypothetical protein MGL_3824 [Malassezia globosa CBS 7966]
Length = 350
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 82/291 (28%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG--------------G 175
KCM H+KR ++ DID AL KNIEP+YG + P+ +GG G
Sbjct: 77 KCMKHAKRTRMTTSDIDHALRQKNIEPLYGF----YPPY---TGGKKQGPWFRTVPTTSG 129
Query: 176 RELHFTDEKEVDFEDLLTNLNPKSALETHL--RTHWLAIEGVQPTVPENPPPVDKSAQKL 233
L+ +++E++FE +L + P+ + + HWLAIEGVQP +PENP P+ + K+
Sbjct: 130 APLYVLEDEEINFEHILEH-GPRVGVGRGVGWHAHWLAIEGVQPPIPENPVPLTR---KM 185
Query: 234 ESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEAC- 292
D DTS +L N VK L H LS E QLYY+ +T +
Sbjct: 186 AGTD----------DTSLADAGEAAAELGNTA---VKPLVKHVLSRELQLYYERLTSSIL 232
Query: 293 --------------------------VGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAE 326
+ S R AL SL D G+H+++P + ++
Sbjct: 233 SPPTDAETETGTALPQEGMPLSNYSDISSGNLVRDAALSSLRGDAGIHQLVPYLIQWVGS 292
Query: 327 GV---------------KVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
V K+ ++ + LL ++ + ALL N S+++E Y+
Sbjct: 293 NVTHSLRLPPTAQDPEKKLEEQKHTIQLLHTMLSTLHALLVNTSIFIEPYV 343
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 53/167 (31%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ +S+K +AES+GI NL D+ A L+ +I Y + I+Q
Sbjct: 35 YPKDSVKDVAESLGITNLRDNIATALATDIEYRIRDIVQSASKCMKHAKRTRMTTSDIDH 94
Query: 47 --------PIYGLTVSQFLPFKHASGG--------------GRELHFTDEKEVDFEDLLT 84
P+YG + P+ +GG G L+ +++E++FE +L
Sbjct: 95 ALRQKNIEPLYGF----YPPY---TGGKKQGPWFRTVPTTSGAPLYVLEDEEINFEHILE 147
Query: 85 NLNPKSALETHL--RTHWLAIEGVQPTVPENPPPVDKSAQKLESISF 129
+ P+ + + HWLAIEGVQP +PENP P+ + + S
Sbjct: 148 H-GPRVGVGRGVGWHAHWLAIEGVQPPIPENPVPLTRKMAGTDDTSL 193
>gi|432921343|ref|XP_004080111.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Oryzias
latipes]
Length = 637
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 133/310 (42%), Gaps = 52/310 (16%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M H+KR KL D + AL N+E + G LPF+ SG EL F D++E++ +L
Sbjct: 55 MKHAKRKKLTVEDFNRALRWSNVEAVCGYGAQDALPFR--SGKEGELFFVDDREINLIEL 112
Query: 192 LTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTS 250
N PK ET +R + ++G K +L+ P
Sbjct: 113 ALATNIPKGCAETMVRVNVAYLDG-------------KGGVELQGAVPT----------- 148
Query: 251 GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATD 310
A LS + YY++IT A +G D AL L ++
Sbjct: 149 ----------------------AVQSLSDDLLKYYQQITRAILGDDPHLMKVALLDLQSN 186
Query: 311 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
+ +LP ++ GVK V ++L L L+ MV++L+ N LYL Y+ L+ S++
Sbjct: 187 SKIAALLPYF-VYVISGVKS--VSHDLEQLNRLLHMVRSLVQNPYLYLGSYVRSLVSSVM 243
Query: 371 SCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKIN 430
CI+ ++HW LRD+A+ LL+ + + + ++ L ++DP
Sbjct: 244 YCILEPLAASINPLNDHWTLRDYAALLLSNIFWTHGDLVSGLYHQILLSLQKVLSDPVRP 303
Query: 431 FPSLYGAIAG 440
S YGA+ G
Sbjct: 304 LCSHYGAVVG 313
>gi|260803104|ref|XP_002596431.1| hypothetical protein BRAFLDRAFT_194325 [Branchiostoma floridae]
gi|229281687|gb|EEN52443.1| hypothetical protein BRAFLDRAFT_194325 [Branchiostoma floridae]
Length = 444
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 139/318 (43%), Gaps = 69/318 (21%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQ---FLPFKHASGGGRELHFTDEK 184
S + M H+KR +L D + AL N+EP+YG F P K A EL+F +++
Sbjct: 47 SCQFMRHAKRKRLTAEDFNRALRWSNVEPMYGHNSPDPMVFRPTKDA-----ELYFYEDR 101
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
E++ + A+ET L P NP
Sbjct: 102 EINLTEF--------AMETIL--------------PRNP--------------------- 118
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL--YYKEITEACVGSDEGRRFE 302
+ GK H K+L ++ ++ ++L YY ++T A +G +E
Sbjct: 119 GETTVKGK-------------GFHFKELLSYSPALSEELVQYYDQVTRAILGGNEQLIKT 165
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
AL L T+ + +LP + E V + ++L L L++ +AL+ N LYL YL
Sbjct: 166 ALADLRTNSRISALLPYFVYLVGE---VKSISHDLEALTRLLQTAQALIQNPHLYLGPYL 222
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
+L+ S++ CI+ ++HWALRD+A+RLL Q+ ++ S +Q ++ L
Sbjct: 223 KQLVASVMYCILEPLAASINPLNDHWALRDYAARLLAQICRSGCMSVEGLQKQLLLALQK 282
Query: 423 AINDPKINFPSLYGAIAG 440
+ DP S YGA+ G
Sbjct: 283 VLVDPARPLCSHYGAVVG 300
>gi|348541933|ref|XP_003458441.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Oreochromis niloticus]
Length = 639
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 133/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E I G LPF+ G EL F ++++V+
Sbjct: 51 SSQFMRHAKRRKLTVEDFNRALRWSNVEAICGYGAQDALPFRSVKEG--ELFFVEDRDVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R + ++G
Sbjct: 109 LVELALATNIPKGCAETMVRVNVSYLDG-------------------------------- 136
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
LE V T A LS + YY++IT A +G D AL
Sbjct: 137 --------KGNLEPQGTVPT------AVQSLSDDLLKYYQQITRAILGEDPHLMKVALLD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L ++ + +LP ++ GVK V ++L L LM MVK+L+ N LYL Y+ L+
Sbjct: 183 LQSNSKIAALLPYF-VYVISGVKS--VSHDLEQLNRLMHMVKSLVQNPYLYLGSYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S++ CI+ ++HW LRD+A+ LL+ + + + ++ L ++D
Sbjct: 240 SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|427794891|gb|JAA62897.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 618
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 47/325 (14%)
Query: 123 KLESISFKC---MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELH 179
+L ++ C M H+KR KL D++ AL + +P YG + + LPF+H ++
Sbjct: 60 RLRELAQNCGQFMRHAKRRKLTCNDMERALRWSDSQPSYGCSGDEPLPFRHIREA--DVF 117
Query: 180 FTDEKEVDFEDLLTN-LNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
TD+ VD D L + L E + WL +EGV P +DK ++ D
Sbjct: 118 CTDDSIVDLADELDSPLQLDLPPEPSVHGRWLVVEGVALE-----PDLDKPMPAVQETD- 171
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEG 298
G K +H ATH YY+EIT+A +GSD+
Sbjct: 172 ----GSK--------------------AIHTDVNATH------MQYYEEITKALLGSDKQ 201
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
AL+ LA++P L +LP + F++ GV+ + ++LA L L+ + AL N SL L
Sbjct: 202 LVDVALEDLASNPCLSPLLPYLVHFVSLGVR--KLSHDLASLDRLLHAIGALAQNTSLNL 259
Query: 359 EK--YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
+ Y ++ ++L C++ A++HWALRD A++LL + + + ++ +V
Sbjct: 260 DTLPYPTMVVQALLFCLLEPLAAAINPANDHWALRDNAAQLLAALLRFWADRVAGLENQV 319
Query: 417 TRLLSNAINDPKIN-FPSLYGAIAG 440
L + DP + + YGA++G
Sbjct: 320 LDALGECVRDPSLRPLCAQYGAVSG 344
>gi|291190468|ref|NP_001167272.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Salmo salar]
gi|223648978|gb|ACN11247.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Salmo salar]
Length = 637
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E I G LPF+ G EL F D+++++
Sbjct: 48 SSQFMRHAKRRKLTVEDFNRALRWSNVEAIAGYGAQDALPFRPIKEG--ELFFVDDRDIN 105
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R + +S L K
Sbjct: 106 LVELALATNIPKGCAETMVRVN------------------------------VSYLDGKG 135
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
N+E A LS + YY++IT A +G D AL
Sbjct: 136 ----------------NLEPQGTVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVALLD 179
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L ++ + +LP ++ GVK V ++L L L+ MVK+L+ N LYL Y+ L+
Sbjct: 180 LQSNSKIAALLPYF-VYVISGVKS--VSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLV 236
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S++ CI+ ++HW LRD+A+ LL+ + + + ++ L ++D
Sbjct: 237 SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSD 296
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 297 PVRPLCSHYGAVVG 310
>gi|291231878|ref|XP_002735891.1| PREDICTED: TAF6-like RNA polymerase II-like [Saccoglossus
kowalevskii]
Length = 459
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 60/313 (19%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M HSKR K+ D + AL ++EPIYG + F+ EL+F
Sbjct: 52 STQYMKHSKRRKMTSEDFNRALKWMDVEPIYGYGSQDPMLFRTTKDA--ELYF------- 102
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
ED NL PE IS GK
Sbjct: 103 MEDKEINL------------------------PE-----------------ISMDGKI-- 119
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSL 307
P A +R ++ K ++ LS + Y++ +T+A +G+DE AL L
Sbjct: 120 -----PVCAGKTTVRG-KSFGFKNHLSYTLSEDLVKYHENVTKAILGNDEDIMKVALDDL 173
Query: 308 ATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLP 367
T+ + +LP + F++ GVK V ++L L LM +V +L+ N +YL YL L+
Sbjct: 174 RTNSKVSSLLPYLIQFVSVGVKK--VNHDLGQLTKLMHIVMSLIYNPFVYLGPYLKRLVS 231
Query: 368 SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDP 427
S++ CI+ ++HW LRD+A+RLL + K +N+S N+++ ++ + D
Sbjct: 232 SVMYCIMEPLAASINPLNDHWTLRDYAARLLAHICKTYNSSVNHLKNQLYAAFQEVLLDH 291
Query: 428 KINFPSLYGAIAG 440
S YGAI G
Sbjct: 292 ARPLCSHYGAIVG 304
>gi|402468109|gb|EJW03308.1| hypothetical protein EDEG_00217 [Edhazardia aedis USNM 41457]
Length = 356
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 40/291 (13%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M S R KL D++ AL +NI+P++G S+ L FK+ + + + E D E
Sbjct: 45 KFMHASHRTKLSIDDVNYALIARNIDPLFGYDPSEPLNFKNINN----FFYIPDDECDIE 100
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
D L PK + HWLAIEGVQP +P+NP P + K ++ D +
Sbjct: 101 DYLNRPLPKLPPNPSVHAHWLAIEGVQPQIPQNPLPAE---NKYKAQDVLHSY------- 150
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
+E V +K LS E Q+Y+ +I + GS + AL L
Sbjct: 151 --------------MEEVEIKANPRLILSKELQMYFDKINKYIEGSSKETTL-ALDCLEN 195
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
D G+ +++P FI + V +N+ ++ M+ ALL N+ ++++ YLH+++P++
Sbjct: 196 DCGIQQLIPY---FIQSFSETLVSKNSTDKREIIIAMLFALLKNKFIFIDPYLHQIVPAL 252
Query: 370 LSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
L+ I+ + R+ +S L + + F+ + N++ R+ L
Sbjct: 253 LTGILGSNFSH--------STREISSTALVYLYERFSNTYNSLAPRIINTL 295
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 33/140 (23%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
FS E++K A S GI N+ D A + LS ++ Y K + Q
Sbjct: 3 FSRETLKAYASSKGITNIDDSAYQLLSQDLEYRVKELCQDAAKFMHASHRTKLSIDDVNY 62
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G S+ L FK+ + + + E D ED L PK +
Sbjct: 63 ALIARNIDPLFGYDPSEPLNFKNINN----FFYIPDDECDIEDYLNRPLPKLPPNPSVHA 118
Query: 99 HWLAIEGVQPTVPENPPPVD 118
HWLAIEGVQP +P+NP P +
Sbjct: 119 HWLAIEGVQPQIPQNPLPAE 138
>gi|17543084|ref|NP_500397.1| Protein TAF-6.2 [Caenorhabditis elegans]
gi|351060543|emb|CCD68234.1| Protein TAF-6.2 [Caenorhabditis elegans]
Length = 814
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 129/257 (50%), Gaps = 29/257 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG--GGREL---HFT--- 181
K S R +L+P D+D A + I+ Y LT P + GR+L H+T
Sbjct: 135 KSASRENRKRLVPSDVDIACGIAQID--YNLTCPLLRPTPSSDRMYWGRKLTKEHYTIDA 192
Query: 182 DEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISK 241
+ KE+ + + ++ HWL ++G+QP +PEN P + + +
Sbjct: 193 NSKEMVSHERFCD-------SIMIKDHWLVVDGIQPCLPENVIPSE-----------VKR 234
Query: 242 LGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF 301
++ + + + + ++ E + K+++T S+E Q+ Y EIT+ +R
Sbjct: 235 RFQEQQHETQRAHGFGVPGIKR-EPMPEKRMSTQTFSMEHQVLYSEITKILTSGSSLQRQ 293
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKY 361
+ L+++ TD G+ + R IAEG ++++ N+ L L+++ +L+ N ++ LEKY
Sbjct: 294 KVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSLMKNPNIRLEKY 353
Query: 362 LHELLPSILSCIVSKQL 378
L+ L+PS++SC+VSK +
Sbjct: 354 LYVLVPSLISCVVSKNM 370
>gi|198467420|ref|XP_002134530.1| GA22349 [Drosophila pseudoobscura pseudoobscura]
gi|198149236|gb|EDY73157.1| GA22349 [Drosophila pseudoobscura pseudoobscura]
Length = 580
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 265 ETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFI 324
E V +K L+ EQQ +Y+ I AC G D+ +AL+SL DP L +LP++ T I
Sbjct: 83 EIVELKPPKRFPLTKEQQAFYQTIIHACWGDDKDALADALKSLQIDPSLEYILPQLTTHI 142
Query: 325 AEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEA 384
+G+ + ++ I + M +AL+ N + K+ H +LPS+LSC++ ++ + A
Sbjct: 143 VDGIDEGLYGKDVYQCIVPLLMAQALVKNSRITFNKHFHLILPSVLSCLLIEEAFEKENA 202
Query: 385 DN---HWALRDFASRLL---TQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
+ HW LR+ ASR++ +V+KN+ N+ R+ R+L + N ++YGA+
Sbjct: 203 EGNEFHWYLRELASRIMGDIVRVTKNY-----NLLGRIIRVLIRGLRRHG-NLFTIYGAV 256
Query: 439 AGEG 442
G G
Sbjct: 257 VGFG 260
>gi|390602989|gb|EIN12381.1| hypothetical protein PUNSTDRAFT_97062 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 440
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 156/346 (45%), Gaps = 59/346 (17%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS--------GGGRELH-- 179
+ M H +R L DID+AL + NIEP+YG + L F+ A G H
Sbjct: 19 RFMRHGRRTTLTTADIDNALRVLNIEPLYGHSPHAPLAFRRAPPVYLPSQPGAANHHHAP 78
Query: 180 ---------FTDEKEVDFEDLLTNLN------PKSALETHLRTHWLAIEGVQPTVPENPP 224
F +++E+DF++L L PK T HWLA+EGVQP +P
Sbjct: 79 SQAQSTSVYFVEDEEIDFDNLGRGLREEKIQLPKPVSWT---AHWLAVEGVQPAIP---- 131
Query: 225 PVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLY 284
++ + + D G P++ + QL LS E QLY
Sbjct: 132 ---ENPPPVPIPRDAATENATDTKQPGLPSAVGPQ----------PQLVKQVLSRELQLY 178
Query: 285 YKEITEACVGSDEGR-----RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV---VQNN 336
Y +T A + +G R AL SL D GL +LP + ++ EGV + QN
Sbjct: 179 YTRLTSALLPPLQGEAEAAKRAAALASLRHDAGLQALLPYLVRWVGEGVVAALKDGAQNV 238
Query: 337 L--ALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFA 394
L +L L+ ++ ALLDNQ+L++E YLH+LLP ILS ++ L P H LR A
Sbjct: 239 LDGRVLEVLLDVIGALLDNQTLFVEPYLHQLLPPILSILLHSSLP--PALAKH--LRTSA 294
Query: 395 SRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ L+ + +T+ ++ R+ + L A+ P + GAI G
Sbjct: 295 ASTLSHLLTQHSTTYPSLSPRIMKTLLLALVSPDKGAGTREGAIRG 340
>gi|315013539|ref|NP_001186651.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Danio rerio]
Length = 641
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N E + G LPF+ G EL + +++E++
Sbjct: 51 SSQFMRHAKRRKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEG--ELFYVEDREIN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H +S L K
Sbjct: 109 LVELALATNIPKGCAETMVRVH------------------------------VSYLDGKG 138
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
N+E A LS + YY++IT A +G D AL
Sbjct: 139 ----------------NLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVALLD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L ++ + +LP ++ GVK V ++L L L+ MVK+L+ N LYL Y+ L+
Sbjct: 183 LQSNSKIAALLPYF-VYVISGVKS--VSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S++ CI+ ++HW LRD+A+ LL+ + + + ++ L ++D
Sbjct: 240 SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|410906721|ref|XP_003966840.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Takifugu rubripes]
Length = 639
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E I+G PF+ G EL ++++V+
Sbjct: 51 SSQFMKHAKRRKLTVEDFNRALRWSNVEAIFGCGAQDATPFRSLKDG--ELFLVEDRDVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R + +S L K
Sbjct: 109 LVELALATNIPKGCAETVVRVN------------------------------VSYLDGKG 138
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
N+E+ A LS E YY+++T A +G D AL
Sbjct: 139 ----------------NLESQGTVPTAVQSLSDELMKYYQQVTRAILGDDPHLMKVALLD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L ++ + +LP ++ GVK V ++L L L+ MVK+L+ N LYL Y+ L+
Sbjct: 183 LQSNSKIAALLPYF-VYVISGVKS--VSHDLEQLNRLLHMVKSLVRNPYLYLGSYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S++ CI+ ++HW LRD+A+ LL+ + + +V L ++D
Sbjct: 240 SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWIHGDLVGGLYHQVLLSLQKVLSD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|217074866|gb|ACJ85793.1| unknown [Medicago truncatula]
gi|388501788|gb|AFK38960.1| unknown [Medicago truncatula]
Length = 326
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
MR+V +LL N +++E YLH+L+PSI++C+V+K+L R DNHW LRDF + L+ + K
Sbjct: 1 MRVVNSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRL-TDNHWELRDFTANLVASIYK 59
Query: 404 NFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
F +N+Q+R+++ L NA +DPK YGAI G G
Sbjct: 60 RFGHVYSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLG 98
>gi|268553091|ref|XP_002634528.1| C. briggsae CBR-TAF-6.2 protein [Caenorhabditis briggsae]
Length = 812
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 49/267 (18%)
Query: 205 LRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL-GKKDKDTSGKPTSAKLEKLRN 263
++ HWL ++GVQP VPEN P + + E +L G P K
Sbjct: 212 IKDHWLVVDGVQPCVPENVIPSEVKRKFQEQQQETQRLYGYSVPGIKRDPPPEK------ 265
Query: 264 VETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTF 323
+++T S+E Q+ Y E+T+ R + L+++ TD GL + R
Sbjct: 266 -------RMSTQTFSMEHQVLYIEVTKILTNGSALERQKVLETIETDTGLQFLAGRFVIL 318
Query: 324 IAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQL----- 378
IAEGV++++ N L LM++ +L+ N ++ LEKYL+ L+PS++SC+VSK +
Sbjct: 319 IAEGVRLHIGTRNTRGLANLMKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNMVPLVD 378
Query: 379 ---------------CGRPE--ADNH----------WALRDFASRLLTQVSKNFNTSTNN 411
G PE +++H + LR+ A +LL ++S + + N
Sbjct: 379 PSRGAHGSSKSKTVTAGTPELTSEDHERIIRDMEFEFRLREAAGKLLAELSNQY--ESQN 436
Query: 412 IQTRVTRLLSNAINDPKINFPSLYGAI 438
+ R+ ++L + K + ++YG +
Sbjct: 437 LSVRIIQMLRKVLAGQK-DPVAIYGVL 462
>gi|126333621|ref|XP_001362631.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
1 [Monodelphis domestica]
Length = 615
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 133/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E + G + LP + A G +L+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPAREG--DLYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H +S L K
Sbjct: 109 LVELALATNIPKGCPETAVRVH------------------------------VSYLDGKG 138
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
NVE A L+ + YY+++T A +G D ALQ
Sbjct: 139 ----------------NVEPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++LL N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLLRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + N + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVNGLSQQILLSLQKVLAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|354504564|ref|XP_003514344.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Cricetulus
griseus]
Length = 673
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + N + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVNGLYQQILLSLQKVLTD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|341880452|gb|EGT36387.1| hypothetical protein CAEBREN_01937 [Caenorhabditis brenneri]
Length = 829
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 60/348 (17%)
Query: 131 CMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRE-LHFTDEKEVDFE 189
C + KR+ P D+D A++ I+ V + P GR+ + + + +
Sbjct: 144 CQENRKRIT--PSDVDLAISAAQIDNDLTCPVLKPTPSTDRMYWGRKSVKRKNIIDATSQ 201
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
D+++N + ++ HWL +EG+QP VPEN P + + E + ++
Sbjct: 202 DIVSN--ERFCDSIMIKDHWLVVEGIQPCVPENVIPSEVKQKFQEQQEETQRVY-----G 254
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G P +L + K+ +T SVE Q+ Y E+T R + L+ L +
Sbjct: 255 YGVPGLQRL-------PMPDKRTSTQMYSVEHQVLYAEVTRTLTSGSALERQKVLEVLES 307
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
D G+ + R IAEGV++++ N+ L L+++ +L+ N + LEKYL+ L+PS+
Sbjct: 308 DTGIQFLAGRFVILIAEGVRLHIGTRNIRGLANLLKLTWSLMKNPHIRLEKYLYVLVPSL 367
Query: 370 LSCIVSKQL-----------------------CGRP---EADNHWALRDF---------A 394
+SC+VSK L G P E D +RD +
Sbjct: 368 ISCVVSKSLVPLVDSSRIASKSTSTTKSTAPVVGTPELTEEDRERIIRDMEFEFKVRESS 427
Query: 395 SRLLTQVSKNF---NTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIA 439
+LL ++S+ + N S IQT + ++L+ + DP ++YG +
Sbjct: 428 GKLLAELSQQYENQNLSVRIIQT-LRKVLTGSSRDP----AAVYGVLC 470
>gi|330688406|ref|NP_001193462.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Bos taurus]
gi|296471685|tpg|DAA13800.1| TPA: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Bos taurus]
Length = 626
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET LR H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D AL
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALHD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLVPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + N + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTYGDLVNGLYQQILLSLQKVLAD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|426252422|ref|XP_004019911.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Ovis aries]
Length = 562
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET LR H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D AL
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALHD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLVPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + N + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTYGDLVNGLYQQILLSLQKVLAD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|413956297|gb|AFW88946.1| putative TATA binding protein family protein [Zea mays]
Length = 334
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 335 NNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFA 394
+L +L+ LMR+V++LL N +++E YLH+L+PS+++CIV+K+L G +DNHW LRDF+
Sbjct: 18 GDLPVLLALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRL-GHRLSDNHWELRDFS 76
Query: 395 SRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ L+ V + F +N+Q R+T+ L +A DP + YGA+ G
Sbjct: 77 ANLVALVCQRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQG 122
>gi|341877986|gb|EGT33921.1| hypothetical protein CAEBREN_26402 [Caenorhabditis brenneri]
Length = 829
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 155/348 (44%), Gaps = 60/348 (17%)
Query: 131 CMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRE-LHFTDEKEVDFE 189
C + KR+ P D+D A++ I+ V + P GR+ + + + +
Sbjct: 144 CQENRKRIT--PSDVDLAISAAQIDNDLTCPVLKPTPSTDRMYWGRKSVKRKNIIDATSQ 201
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDT 249
D+++N + ++ HWL +EG+QP VPEN P + + E + ++
Sbjct: 202 DIVSN--ERFCDSIMIKDHWLVVEGIQPCVPENVIPSEVKQKFQEQQEETQRVY-----G 254
Query: 250 SGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLAT 309
G P +L + K+ +T SVE Q+ Y E+T R + L+ L +
Sbjct: 255 YGVPGLQRL-------PMPDKRTSTQMYSVEHQVLYAEVTRTLTSGSALERQKVLEVLES 307
Query: 310 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSI 369
D G+ + R IAEGV++++ N L L+++ +L+ N + LEKYL+ L+PS+
Sbjct: 308 DTGIQFLAGRFVILIAEGVRLHIGTRNTRGLANLLKLTWSLMKNPHIRLEKYLYVLVPSL 367
Query: 370 LSCIVSKQL-----------------------CGRPE------------ADNHWALRDFA 394
+SC+VSK L G PE + + +R+ +
Sbjct: 368 ISCVVSKSLVPLVDSSRIASKSTSTTKSTAPVVGTPELTEEDRERIIRDMEFEFKIRESS 427
Query: 395 SRLLTQVSKNF---NTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIA 439
+LL ++S+ + N S IQT + ++L+ + DP ++YG +
Sbjct: 428 GKLLAELSQQYENQNLSVRIIQT-LRKVLTGSSRDP----AAVYGVLC 470
>gi|440898153|gb|ELR49708.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Bos grunniens mutus]
Length = 619
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--DLYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET LR H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D AL
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALHD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLVPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + N + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTYGDLVNGLYQQILLSLQKVLAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|157820939|ref|NP_001101045.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Rattus norvegicus]
gi|149062298|gb|EDM12721.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor (predicted) [Rattus norvegicus]
gi|197246841|gb|AAI68911.1| Taf6l protein [Rattus norvegicus]
Length = 623
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|335281666|ref|XP_003353862.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L-like [Sus scrofa]
Length = 626
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DL N PK ET +R H ++G P+ P
Sbjct: 116 LVDLALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|406697734|gb|EKD00987.1| hypothetical protein A1Q2_04674 [Trichosporon asahii var. asahii
CBS 8904]
Length = 783
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 147/344 (42%), Gaps = 69/344 (20%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIY----GLTVSQF--LPFKHASGG--GRELHFT 181
K M H KR LLP D++ A+ ++EP+ L + F +P S G G+ H
Sbjct: 353 KFMVHGKRTTLLPEDVEHAMEALSVEPVIVPPRPLPQAPFHAVPVPGGSQGPAGQLYHEI 412
Query: 182 DEKEVDFEDLLTNLNPKS---ALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
D+ E+DF L P + + + HWLA+EGVQP +PENP P +S
Sbjct: 413 DD-EIDFATYLKEPLPPALANSAGVKWKAHWLAVEGVQPAIPENPAPTARSG-------- 463
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD-- 296
T +PT+ + ++Q A L+ E QLY+ +T A V S
Sbjct: 464 ---------PTRPQPTTG---------SAALRQNAKTHLTTELQLYFSRLTAALVPSTAA 505
Query: 297 --------------------EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
E R AL S+ +D + +L + +++E + +
Sbjct: 506 LAQLPGNPAPGSTAHAFPEAERHRLAALASVRSDAAVAGVLAYLIRWVSESI-TKCLMGA 564
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRP---EADNHWALRDF 393
+ L+ +V+A+LDN L++E Y L +LS +++ L P + + LR
Sbjct: 565 TGTIGCLIDVVEAILDNDVLFVEPY---FLGPLLSILLTVPLGPHPVTGPGPSPFDLRSR 621
Query: 394 ASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
AS +L ++ + + + R+ L+ A+ P FPS GA
Sbjct: 622 ASDVLAKLVSQYAATYPGLIPRLLSTLTKALQAPP--FPSPLGA 663
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 62 ASGGGRELHFTDEKEVDFEDLLTNLNPKS---ALETHLRTHWLAIEGVQPTVPENPPPVD 118
+ G +L+ + E+DF L P + + + HWLA+EGVQP +PENP P
Sbjct: 401 SQGPAGQLYHEIDDEIDFATYLKEPLPPALANSAGVKWKAHWLAVEGVQPAIPENPAPTA 460
Query: 119 KSA 121
+S
Sbjct: 461 RSG 463
>gi|47209819|emb|CAF92633.1| unnamed protein product [Tetraodon nigroviridis]
Length = 628
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 134/324 (41%), Gaps = 52/324 (16%)
Query: 118 DKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRE 177
D +A E S + M H+KR KL D + AL N+E ++G F+ G E
Sbjct: 31 DVAALLAEDSSSQFMRHAKRRKLTVEDFNRALRWSNVEAVFGCGAQDATSFRSLKEG--E 88
Query: 178 LHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESI 236
L ++++V+ +L N PK ET +R +
Sbjct: 89 LFLIEDRDVNLVELALATNIPKGCAETVVRVN---------------------------- 120
Query: 237 DPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD 296
+S L K N+E A LS E YY+++T A +G D
Sbjct: 121 --VSYLDGKG----------------NLENQGTVPTAVQSLSDELLKYYQQVTRAILGDD 162
Query: 297 EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL 356
AL L ++ + +LP ++ GVK V ++L L L+ MVK+L+ N L
Sbjct: 163 PHLMKVALLDLQSNSKIAALLPYF-VYVISGVKS--VSHDLEQLNRLLHMVKSLVRNPYL 219
Query: 357 YLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRV 416
YL Y+ L+ S++ CI+ ++HW LRD+A+ LL+ + + +V
Sbjct: 220 YLGSYVRSLVSSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWIHGDLVGGLYHQV 279
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
L ++DP S YGA+ G
Sbjct: 280 LLSLQKVLSDPVRPLCSHYGAVVG 303
>gi|355723136|gb|AES07794.1| TAF6-like RNA polymerase II, p300/CBP-associated factor -associated
factor, 65kDa [Mustela putorius furo]
Length = 432
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 10 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 67
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 68 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 107
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 108 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQD 141
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 142 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 198
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 199 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 258
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 259 PVRPLCSHYGAVVG 272
>gi|353239066|emb|CCA70991.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Piriformospora indica DSM 11827]
Length = 525
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 44/266 (16%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--------SGGGRELHFT 181
+ H KR + DID AL NIEP+YG F+ A S ++F
Sbjct: 60 RFTRHGKRTTMNTQDIDLALQSLNIEPLYGHLSHMPTVFRRANPNPAGTNSKVAAPVYFV 119
Query: 182 DEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQK-LESIDPIS 240
+++EVDF+ +L + + HWLA+EG+QP +NPP S QK + P S
Sbjct: 120 EDEEVDFDKVLRDEKVTLPKMVNWHAHWLAVEGIQPLTADNPPRPPLSEQKGRKQSPPRS 179
Query: 241 KLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACV------- 293
L G + K + ++ H LS E Q+YY +T A +
Sbjct: 180 VLAPVAPAMQGAGANRKYKPVK------------HVLSRELQIYYSRLTAALLPPASSIT 227
Query: 294 --GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN-------------NLA 338
RR AL SL D GL +LP + ++ + V V ++N
Sbjct: 228 DEAQQNARRTAALASLQYDAGLQNLLPYLVRWVGQSV-VTAIRNMDERERASKAADATGE 286
Query: 339 LLIYLMRMVKALLDNQSLYLEKYLHE 364
L L++++ AL+ N+ L++E YLH+
Sbjct: 287 TLEILLKVIHALIQNERLFIEPYLHQ 312
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 37/156 (23%)
Query: 5 GTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------- 44
G+ +S E+++ +A SIG+PNLPD+ + L+ ++ Y +
Sbjct: 15 GSIYSAEAVQDVAASIGLPNLPDELLQRLAKDVEYRIHQVVEEAARFTRHGKRTTMNTQD 74
Query: 45 ---------IQPIYGLTVSQFLPFKHA--------SGGGRELHFTDEKEVDFEDLLTNLN 87
I+P+YG F+ A S ++F +++EVDF+ +L +
Sbjct: 75 IDLALQSLNIEPLYGHLSHMPTVFRRANPNPAGTNSKVAAPVYFVEDEEVDFDKVLRDEK 134
Query: 88 PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQK 123
+ HWLA+EG+QP +NPP S QK
Sbjct: 135 VTLPKMVNWHAHWLAVEGIQPLTADNPPRPPLSEQK 170
>gi|410974436|ref|XP_003993653.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Felis catus]
Length = 528
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|443917577|gb|ELU38272.1| transcription initiation factor TFIID complex 60 kDa subunit
[Rhizoctonia solani AG-1 IA]
Length = 610
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 124/290 (42%), Gaps = 55/290 (18%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG---GRELHFTDEKEV 186
+ H++R + P DID +P+YG + + F+ A + ++F +++E+
Sbjct: 125 RFTRHARRSTMSPADID--------QPLYGHSSAHTPTFRRAVPQHTLSQSVYFLEDEEI 176
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DF+ L HWLAIEG+QP VPENP ++ + P S +K
Sbjct: 177 DFDKALKEEVITVPPPVRYTAHWLAIEGIQPLVPENPTTSAETKTATTTQGPPSPRARKQ 236
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
+ + L H L E QLY+ ++ A + +E +R AL S
Sbjct: 237 GIAA-----PTTTNSTTAASTSAATLVKHVLPRELQLYHDRLSSALISGNERKRTAALSS 291
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQN----------------------NLALLIYLM 344
L D GL +LP + +I E V V V++ + A L ++
Sbjct: 292 LRADAGLQALLPYLIRWIGETV-VRVLKGEGATHTGDDGSDDDAMFGSDELDRAKLDIML 350
Query: 345 RMVKALLDNQSLYLEKY----------------LHELLPSILSCIVSKQL 378
+KALLDN++L++E Y LH+++P ILS +++ L
Sbjct: 351 DALKALLDNKTLFVEPYVSVGKIASPLSNTFLQLHQIMPPILSILLTASL 400
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVII----------------- 45
+ G + +S+K +A+S+GI NLPD A L+ ++ Y ++
Sbjct: 78 VVGGLYRADSVKDVADSLGIANLPDSVAAALASDVEYRLHQVVEEAARFTRHARRSTMSP 137
Query: 46 ----QPIYGLTVSQFLPFKHASGG---GRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
QP+YG + + F+ A + ++F +++E+DF+ L
Sbjct: 138 ADIDQPLYGHSSAHTPTFRRAVPQHTLSQSVYFLEDEEIDFDKALKEEVITVPPPVRYTA 197
Query: 99 HWLAIEGVQPTVPENP 114
HWLAIEG+QP VPENP
Sbjct: 198 HWLAIEGIQPLVPENP 213
>gi|395852462|ref|XP_003798757.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Otolemur
garnettii]
Length = 620
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRSAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLVD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|73983375|ref|XP_533259.2| PREDICTED: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa isoform 1 [Canis lupus
familiaris]
Length = 625
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|291409520|ref|XP_002721088.1| PREDICTED: TAF6-like RNA polymerase II [Oryctolagus cuniculus]
Length = 712
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 142 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 199
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 200 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 239
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 240 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 273
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 274 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 330
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 331 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 390
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 391 PVRPLCSHYGAVVG 404
>gi|351699183|gb|EHB02102.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L, partial [Heterocephalus
glaber]
Length = 365
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNLPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|401886199|gb|EJT50256.1| hypothetical protein A1Q1_00483 [Trichosporon asahii var. asahii
CBS 2479]
Length = 783
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 146/344 (42%), Gaps = 69/344 (20%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIY----GLTVSQF--LPFKHASGG--GRELHFT 181
K M H KR LLP D++ A+ ++EP+ L + F +P S G G+ H
Sbjct: 353 KFMVHGKRTTLLPEDVEHAMEALSVEPVIVPPRPLPQAPFHAVPVPGGSQGPAGQLYHEI 412
Query: 182 DEKEVDFEDLLTNLNPKS---ALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP 238
D+ E+DF L P + + + HWLA+EGVQP +PENP P +S
Sbjct: 413 DD-EIDFATYLKEPLPPALANSAGVKWKAHWLAVEGVQPAIPENPAPTARSGP------- 464
Query: 239 ISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD-- 296
T +PT+ + ++Q A L+ E QLY+ +T A V S
Sbjct: 465 ----------TRPQPTTG---------SAALRQNAKTHLTTELQLYFSRLTAALVPSTAA 505
Query: 297 --------------------EGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
E R AL S+ +D + +L +++E + +
Sbjct: 506 LAQLPGNPAPGSTAHAFPEAEWHRLAALASVRSDAAVAGVLAYPIRWVSESI-TKCLMGA 564
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRP---EADNHWALRDF 393
+ L+ +V+A+LDN L++E Y L +LS +++ L P + + LR
Sbjct: 565 TGTIGCLIDVVEAILDNDVLFVEPY---FLGPLLSILLTVPLGPHPVTGPGPSPFDLRSR 621
Query: 394 ASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
AS +L ++ + + + R+ L+ A+ P FPS GA
Sbjct: 622 ASDVLAKLVSQYAATYPGLIPRLLSTLTKALQAPP--FPSPLGA 663
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 62 ASGGGRELHFTDEKEVDFEDLLTNLNPKS---ALETHLRTHWLAIEGVQPTVPENPPPVD 118
+ G +L+ + E+DF L P + + + HWLA+EGVQP +PENP P
Sbjct: 401 SQGPAGQLYHEIDDEIDFATYLKEPLPPALANSAGVKWKAHWLAVEGVQPAIPENPAPTA 460
Query: 119 KSA 121
+S
Sbjct: 461 RSG 463
>gi|301779984|ref|XP_002925422.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L-like [Ailuropoda melanoleuca]
Length = 529
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL + + + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLXXIFWTHGDLVSGLYQQILLSLQKVLAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|295317363|ref|NP_666204.2| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L isoform 1 [Mus musculus]
Length = 623
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--DLYFPEDREVS 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 189
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 190 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 246
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 247 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTD 306
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 307 PVRPLCSHYGAVVG 320
>gi|46577508|sp|Q8R2K4.1|TAF6L_MOUSE RecName: Full=TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L; AltName:
Full=PCAF-associated factor 65-alpha; Short=PAF65-alpha
gi|20307033|gb|AAH28647.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor [Mus musculus]
gi|148701422|gb|EDL33369.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, isoform CRA_a [Mus musculus]
Length = 616
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--DLYFPEDREVS 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|296218538|ref|XP_002755482.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Callithrix
jacchus]
Length = 622
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 130/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTWAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLGQLHRLLQVARSLFRNPHLCLAPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWILRDAAALLLSHIFWTHGDHVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|339246267|ref|XP_003374767.1| transcription initiation factor TFIID subunit 6 [Trichinella
spiralis]
gi|316971978|gb|EFV55686.1| transcription initiation factor TFIID subunit 6 [Trichinella
spiralis]
Length = 420
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 54/290 (18%)
Query: 179 HFTDEKEVDFEDLLT-NLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
H T +K+ E +L +++ K T L HWL IEG QP +PEN
Sbjct: 73 HRTMKKKYVLESILNESIDRKIQEGTCLNAHWLGIEGKQPLLPENR-------------- 118
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHV--KQLATHELSVEQQLYYKEITEACVGS 295
+ G+ E + N+ET + + + +L+ E + E+ + CV
Sbjct: 119 -----------SQGRSYVVAEEGMSNIETEELLHQDMNFDQLTEETRELVLELLDGCVSK 167
Query: 296 DEGRRF---------------------EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQ 334
DE +RF EAL+ + T GL L F EG+ N++
Sbjct: 168 DETKRFVYFFSSYFYFNNCNNEFCPFQEALRMIQTHVGLQPALSFFVIFYLEGINCNLLC 227
Query: 335 NNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFA 394
+L + +++M+ ALL N ++ L KY +LLPS+LSC V+ + D W +R+ A
Sbjct: 228 KDLRHITCMLQMLNALLLNPAIRLWKYTPKLLPSLLSCAVNMIFDVKCGDDRAWLVRERA 287
Query: 395 SRLLTQVSKNF-----NTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIA 439
+ +L + F + + ++ + R L+ ND + PS YG +
Sbjct: 288 ADILGDLLNYFERMAVDDGEDELKIKFIRHLTTIWNDEQTTIPSAYGVLC 337
>gi|403255122|ref|XP_003920296.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 1
[Saimiri boliviensis boliviensis]
Length = 622
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 130/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTWAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLGQLHRLLQVARSLFRNPHLCLAPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWILRDAAALLLSHIFWTHGDHVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|301607335|ref|XP_002933254.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
1 [Xenopus (Silurana) tropicalis]
gi|301607337|ref|XP_002933255.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
2 [Xenopus (Silurana) tropicalis]
Length = 574
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 53/320 (16%)
Query: 122 QKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFT 181
++L S +C+ HS+R +L D + AL N+E + G + ++ G + H+T
Sbjct: 45 RELTQFSAQCLRHSRRRRLTVEDFNRALRWSNVEAVCGHGSPDSVTYRSIKDG--DCHYT 102
Query: 182 DEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS 240
+++E++ +L N PK ET +R H +S
Sbjct: 103 EDREINLVELALATNIPKGTPETAVRVH------------------------------VS 132
Query: 241 KLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
L K N+E A L+ + YY+ +T A +G D
Sbjct: 133 YLDGKG----------------NLEHQGTVPAAVSLLTDDLLKYYQRVTRAVLGDDPHLM 176
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
ALQ L T+ + +LP ++ GVK V ++L L L+++V++LL N LYL
Sbjct: 177 KVALQDLQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLSRLLQLVRSLLWNPFLYLGY 233
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
Y L+ S+L C+ ++HW LRD+ + LL+ + + + + ++ ++ + L
Sbjct: 234 YGCSLMQSVLYCVTEPLAASINPLNDHWTLRDYGAGLLSLIWTHQDLA-GSLYPQILQSL 292
Query: 421 SNAINDPKINFPSLYGAIAG 440
+ DP S YGA+ G
Sbjct: 293 QKVLGDPVRPLCSHYGAVVG 312
>gi|348564202|ref|XP_003467894.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Cavia
porcellus]
Length = 745
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + G EL+F +++EV+
Sbjct: 198 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPTREG--ELYFPEDREVN 255
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 256 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 295
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 296 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 329
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 330 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 386
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 387 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 446
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 447 PVRPLCSHYGAVVG 460
>gi|403255124|ref|XP_003920297.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 2
[Saimiri boliviensis boliviensis]
Length = 634
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 130/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 63 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 120
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 121 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 160
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 161 --------------------------AVSSLTDDLLKYYQQVTWAVLGDDPQLMKVALQD 194
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 195 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLGQLHRLLQVARSLFRNPHLCLAPYVRCLV 251
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 252 GSVLYCVLEPLAASINPLNDHWILRDAAALLLSHIFWTHGDHVSGLYQHILLSLQKILAD 311
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 312 PVRPLCSHYGAVVG 325
>gi|443896812|dbj|GAC74155.1| hypothetical protein PANT_10d00039 [Pseudozyma antarctica T-34]
Length = 753
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 90/188 (47%), Gaps = 35/188 (18%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA-SGGGRE----------- 177
K M HSKR +L DID AL +NIEPIYG FLP +GGG
Sbjct: 157 KYMRHSKRDQLKTADIDAALRARNIEPIYG-----FLPSSSGRTGGGNPSGYTAGPIFRR 211
Query: 178 --------LHFTDEKEVDFEDLLTNLNPKSALETHLR--THWLAIEGVQPTVPENPPPVD 227
LH+ +++E+DF+ +L PK + + HWLAIEGVQP VP+NP P+
Sbjct: 212 VQTSSGVPLHYIEDEEIDFDKIL-EAGPKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIA 270
Query: 228 KSAQKLES--IDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYY 285
+ K S + P S L ++ P + + K L H LS E QLYY
Sbjct: 271 IAEAKGTSGFMGPTSTL-----PSASVPAAKAVTVAGGDGQAVAKPLVKHILSRELQLYY 325
Query: 286 KEITEACV 293
+ +T++ +
Sbjct: 326 ERLTKSII 333
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 50/178 (28%)
Query: 294 GSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGV------------------------- 328
GS R AL SL DPGLH+++P + F+ V
Sbjct: 395 GSGNHVRDAALASLRGDPGLHQLVPYLIRFVGSKVIDILRAPADEAEGGADADGAPAAVR 454
Query: 329 ---KVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPE-- 383
+++ N++ L L+ + A+L N +++E YLH+++PSILS +++ L PE
Sbjct: 455 ETRQISTADNHM--LSVLLSTIHAILVNPHIFIEPYLHQMMPSILSILLTSSLA-EPELL 511
Query: 384 -----AD------------NHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI 424
AD + ++LR AS LLT V F S ++ RV L A+
Sbjct: 512 AQMRNADADVQTPLITAGPSSYSLRAHASALLTHVVDTFGASYPTLKPRVVATLLKAL 569
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 57/161 (35%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ ++++ +AES+GI + + A L+ ++ Y + I+Q
Sbjct: 115 YPTDTVRDVAESLGINGMKESVAAALAADVEYRIREIVQDATKYMRHSKRDQLKTADIDA 174
Query: 47 --------PIYGLTVSQFLPFKHA-SGGGRE-------------------LHFTDEKEVD 78
PIYG FLP +GGG LH+ +++E+D
Sbjct: 175 ALRARNIEPIYG-----FLPSSSGRTGGGNPSGYTAGPIFRRVQTSSGVPLHYIEDEEID 229
Query: 79 FEDLLTNLNPKSALETHLR--THWLAIEGVQPTVPENPPPV 117
F+ +L PK + + HWLAIEGVQP VP+NP P+
Sbjct: 230 FDKIL-EAGPKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPI 269
>gi|431910358|gb|ELK13431.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Pteropus alecto]
Length = 621
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELCFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 299
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 300 PVRPLCSHYGAVVG 313
>gi|291244772|ref|XP_002742271.1| PREDICTED: TBP-associated factor 6-like [Saccoglossus kowalevskii]
Length = 154
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M H KR +L D D AL ++N+EP+YG S+F+PF+ ASGGGRELHF +EKE D
Sbjct: 61 SIKFMRHGKRRRLSTTDFDHALKVRNVEPLYGFQASEFIPFRFASGGGRELHFNEEKETD 120
Query: 188 FEDLLTNLNPKSALETHLR 206
D++ PK ++ L+
Sbjct: 121 LNDIINTARPKIPVDVSLK 139
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 29/118 (24%)
Query: 9 SIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ---------------------- 46
+ ES+KVI+ES+GI +L DDA L+D++TY K + Q
Sbjct: 22 TTESVKVISESVGIDSLSDDALTLLADDVTYRLKEMTQESIKFMRHGKRRRLSTTDFDHA 81
Query: 47 -------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG S+F+PF+ ASGGGRELHF +EKE D D++ PK ++ L+
Sbjct: 82 LKVRNVEPLYGFQASEFIPFRFASGGGRELHFNEEKETDLNDIINTARPKIPVDVSLK 139
>gi|195164473|ref|XP_002023072.1| GL16368 [Drosophila persimilis]
gi|194105134|gb|EDW27177.1| GL16368 [Drosophila persimilis]
Length = 501
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Query: 277 LSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNN 336
L+ EQQ +Y+ I AC G DE AL+SL DP L +LP++ T I +G+ + +
Sbjct: 95 LTKEQQAFYQTIIHACWGDDEDALAHALKSLQIDPSLEYILPQLTTHIVDGIDEGLYDKD 154
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADN---HWALRDF 393
+ I + M +AL+ N+ + K+ H +LPS+LSC++ ++ + + + HW LR+
Sbjct: 155 VYQCIVPLLMAQALVKNRRITFNKHFHLILPSVLSCLLIQEAFEKEDVEGNEFHWYLREL 214
Query: 394 ASRLL---TQVSKNFNTSTNNIQT 414
ASR++ +V K++N I+T
Sbjct: 215 ASRIMGDIVRVIKSYNLLGRIIRT 238
>gi|308492802|ref|XP_003108591.1| hypothetical protein CRE_10940 [Caenorhabditis remanei]
gi|308248331|gb|EFO92283.1| hypothetical protein CRE_10940 [Caenorhabditis remanei]
Length = 839
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 137 RVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN 196
R +++P D+D A+ I + + + P GR++ +K +D +
Sbjct: 148 RQRIVPSDVDLAICSAEINSDFTCPLLKPTPATDRMYWGRKMT-KPKKTIDANSSEIVSH 206
Query: 197 PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL------GKKDKDTS 250
+ ++ HWL ++GVQP VPEN P + + E ++ G + +
Sbjct: 207 ERFCDSIMIKDHWLVVDGVQPCVPENVIPTEVKQKYQEQQQETQRVFGYGVSGVRKQIPE 266
Query: 251 GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATD 310
+PT+ +TV + Q E Q+ Y E+T+ R + L+++ TD
Sbjct: 267 KRPTT---------QTVLMLQ--------EHQVLYAEMTKILTNGSALERQKVLETIETD 309
Query: 311 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
G + R IAEGV++++ N+ L L+++ +L+ N ++LEKYL+ L+PS++
Sbjct: 310 TGFQFLAGRFVILIAEGVRLHIGTKNIRGLANLLKLAWSLMKNPHIWLEKYLYVLVPSLI 369
Query: 371 SCIVSKQL 378
SC+VSK +
Sbjct: 370 SCVVSKSM 377
>gi|308453105|ref|XP_003089302.1| hypothetical protein CRE_11592 [Caenorhabditis remanei]
gi|308241224|gb|EFO85176.1| hypothetical protein CRE_11592 [Caenorhabditis remanei]
Length = 959
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 137 RVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN 196
R +++P D+D A+ I + + + P GR++ +K +D +
Sbjct: 148 RQRIVPSDVDLAICSAEINSDFTCPLLKPTPATDRMYWGRKMT-KPKKTIDANSSEIVSH 206
Query: 197 PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL------GKKDKDTS 250
+ ++ HWL ++GVQP VPEN P + + E ++ G + +
Sbjct: 207 ERFCDSIMIKDHWLVVDGVQPCVPENVIPTEVKQKYQEQQQETQRVFGYGVSGVRKQIPE 266
Query: 251 GKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATD 310
+PT+ +TV + Q E Q+ Y E+T+ R + L+++ TD
Sbjct: 267 KRPTT---------QTVLMLQ--------EHQVLYAEMTKILTNGSALERQKVLETIETD 309
Query: 311 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
G + R IAEGV++++ N+ L L+++ +L+ N ++LEKYL+ L+PS++
Sbjct: 310 TGFQFLAGRFVILIAEGVRLHIGTKNIRGLANLLKLAWSLMKNPHIWLEKYLYVLVPSLI 369
Query: 371 SCIVSKQL 378
SC+VSK +
Sbjct: 370 SCVVSKSM 377
>gi|158260021|dbj|BAF82188.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLGQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|148235636|ref|NP_001085716.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Xenopus laevis]
gi|49115232|gb|AAH73241.1| MGC80584 protein [Xenopus laevis]
Length = 574
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 53/320 (16%)
Query: 122 QKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFT 181
++L S + + HS+R +L D + AL N+E + G S + ++ G + H+T
Sbjct: 45 RELTQFSAQGLRHSRRRRLTVEDFNRALRWSNVEAVCGHGSSDAVTYRSIKDG--DCHYT 102
Query: 182 DEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS 240
+++E++ +L N PK ET +R H +S
Sbjct: 103 EDREINLVELALATNIPKGTPETAVRVH------------------------------VS 132
Query: 241 KLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
L K N+E A L+ + YY+ +T A +G D
Sbjct: 133 YLDGKG----------------NLEHQGTVPAAVSLLTDDLLKYYQRVTRAVLGDDPHLM 176
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
ALQ L T+ + +LP ++ GVK V ++L L L+++V++LL N LYL
Sbjct: 177 KVALQDLQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLSRLLQLVRSLLWNPFLYLGH 233
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
Y L+ S+L C+ ++HW LRD+ + LL+ + + + + ++ ++ + L
Sbjct: 234 YGCSLMQSVLYCVTEPLAASINPLNDHWTLRDYGAGLLSLIWTHQDLA-GSMYPQILQSL 292
Query: 421 SNAINDPKINFPSLYGAIAG 440
+ DP S YGA+ G
Sbjct: 293 QKVLGDPVRPLCSHYGAVVG 312
>gi|397517251|ref|XP_003828830.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Pan
paniscus]
Length = 573
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|332836744|ref|XP_001142675.2| PREDICTED: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410217404|gb|JAA05921.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410259762|gb|JAA17847.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410293910|gb|JAA25555.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410352299|gb|JAA42753.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
Length = 622
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|5453844|ref|NP_006464.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Homo sapiens]
gi|46577572|sp|Q9Y6J9.1|TAF6L_HUMAN RecName: Full=TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L; AltName:
Full=PCAF-associated factor 65-alpha; Short=PAF65-alpha
gi|3335559|gb|AAC39905.1| PCAF associated factor 65 alpha [Homo sapiens]
gi|119594499|gb|EAW74093.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
sapiens]
gi|119594500|gb|EAW74094.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
sapiens]
gi|189067267|dbj|BAG36977.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|380787061|gb|AFE65406.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
gi|383413521|gb|AFH29974.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
gi|384943890|gb|AFI35550.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
Length = 622
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|426368911|ref|XP_004051444.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Gorilla
gorilla gorilla]
Length = 694
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|355566389|gb|EHH22768.1| PCAF-associated factor 65-alpha [Macaca mulatta]
Length = 622
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|281200383|gb|EFA74603.1| TATA-binding protein-associated-factor [Polysphondylium pallidum
PN500]
Length = 382
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S K M H+KR L DI++AL ++NIE +YG S+ F + ++F +KE+
Sbjct: 44 SIKFMKHAKREYLTTDDINNALKLRNIEVLYGYGASEPYKFSKVLSPSQAIYFVHDKELL 103
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP 225
F+D++ PK E L HWLA+EGVQP +P+NPPP
Sbjct: 104 FQDIIAQPLPKCPREPSLAAHWLALEGVQPLIPQNPPP 141
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 29/135 (21%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVI-------------------------- 44
+++KVIAE +GI NL D+ A +L+ ++ Y + I
Sbjct: 7 DTIKVIAECVGISNLNDEIATQLASDVEYRIREIAQESIKFMKHAKREYLTTDDINNALK 66
Query: 45 ---IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWL 101
I+ +YG S+ F + ++F +KE+ F+D++ PK E L HWL
Sbjct: 67 LRNIEVLYGYGASEPYKFSKVLSPSQAIYFVHDKELLFQDIIAQPLPKCPREPSLAAHWL 126
Query: 102 AIEGVQPTVPENPPP 116
A+EGVQP +P+NPPP
Sbjct: 127 ALEGVQPLIPQNPPP 141
>gi|402893067|ref|XP_003909725.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Papio
anubis]
Length = 622
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL +++ + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVDAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + + L + D
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILAD 299
Query: 427 PKINFPSLYGAIAG 440
P YGA+ G
Sbjct: 300 PVRPLCCHYGAVVG 313
>gi|302689849|ref|XP_003034604.1| hypothetical protein SCHCODRAFT_52257 [Schizophyllum commune H4-8]
gi|300108299|gb|EFI99701.1| hypothetical protein SCHCODRAFT_52257, partial [Schizophyllum
commune H4-8]
Length = 455
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 28/251 (11%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLT------VSQFLPFKHASGGGRELHFTDE 183
+ M H +R L D++ A + NIEP+YG + + LP+ +++ G ++F ++
Sbjct: 36 RFMRHGRRTTLTVSDMEQAFKVLNIEPLYGHSQHNPPVFRRALPYPNSNAG--PVYFVED 93
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG 243
+E+DF+ +L HWLA+EGVQP +PENPP + K D + L
Sbjct: 94 EEIDFDRVLREEKLALPKGVTYHAHWLAVEGVQPQIPENPPVIVKEG------DVPAPLN 147
Query: 244 KKDKDTSGKPTSAKLEKLRNVETVHVKQLATHE--LSVEQQLYYKEITEACV-----GSD 296
K P + ++KL+ +Q + LS E QLYY +T + D
Sbjct: 148 AKTNGVVVTP-AGGVKKLQQTPIQGQQQQQLVKQVLSRELQLYYTRLTTSLSTSSYSAPD 206
Query: 297 E-GRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLA-----LLIYLMRMVKAL 350
E +R A+ SL+ D GL +LP + +++E V + + + L ++ ++ AL
Sbjct: 207 ELKKRAAAIGSLSQDAGLQALLPYLIRWVSESVVAVLKEGGQSEQDGHTLETMLDVIGAL 266
Query: 351 LDNQSLYLEKY 361
+ N +L++E Y
Sbjct: 267 MRNTTLFIEPY 277
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 37/141 (26%)
Query: 16 IAESIGIPNLPDDAAKELSDNITY----------------------------CCKVI-IQ 46
+A+S+ IPNL D A L++++ Y KV+ I+
Sbjct: 2 VADSLNIPNLSDIVATALANDVEYRLHQVVEEAARFMRHGRRTTLTVSDMEQAFKVLNIE 61
Query: 47 PIYGLT------VSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
P+YG + + LP+ +++ G ++F +++E+DF+ +L HW
Sbjct: 62 PLYGHSQHNPPVFRRALPYPNSNAG--PVYFVEDEEIDFDRVLREEKLALPKGVTYHAHW 119
Query: 101 LAIEGVQPTVPENPPPVDKSA 121
LA+EGVQP +PENPP + K
Sbjct: 120 LAVEGVQPQIPENPPVIVKEG 140
>gi|388855779|emb|CCF50563.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Ustilago hordei]
Length = 700
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 23/182 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGL------TVSQFLPFKHASG---------G 174
K M HSKR +L DID AL +NIEPIYG S + K+ +G
Sbjct: 92 KYMRHSKRDQLKTTDIDAALRARNIEPIYGFLPSSSGRSSTNIASKYTAGPTFRRVQTSS 151
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLR--THWLAIEGVQPTVPENPPPVDKSAQK 232
G LH+ +++E+DF+ +L PK + + HWLAIEGVQP VP+NP P+ +
Sbjct: 152 GVPLHYVEDEEIDFDKIL-EAGPKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIA--- 207
Query: 233 LESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHV-KQLATHELSVEQQLYYKEITEA 291
E+ +G +AK + E + K L H LS E QLYY+ +T++
Sbjct: 208 -EAKGATGFMGSTTTQPGAAAPAAKAVTVAGGEGQAIAKPLVKHILSRELQLYYERLTKS 266
Query: 292 CV 293
V
Sbjct: 267 IV 268
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 47/180 (26%)
Query: 289 TEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIA----------------------- 325
T A GS R AL SL DPGLH+++P + F+
Sbjct: 323 TFAQKGSGNHVRDAALASLRGDPGLHQLVPYLIQFVGSKVIEILRSPSEENEADGESVST 382
Query: 326 ---EGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRP 382
E +++ N++ L L+ + A+L N +++E YLH+++PSILS +++ L P
Sbjct: 383 AVRESRQISTADNHM--LGVLLSTIHAILVNPHIFIEPYLHQMMPSILSVLLTSSLA-EP 439
Query: 383 E------------------ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI 424
E + ++LR AS LLT V F +S ++ RV L A+
Sbjct: 440 ELHRQLHSSDDIQMPLVTAGPSSYSLRAHASALLTHVVDTFGSSYPTLKPRVVATLLKAL 499
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 47/156 (30%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ ++++ +AES+GI + + A L+ ++ Y + I+Q
Sbjct: 50 YPTDTIRDVAESVGIMGMKESIAAALAADVEYRIREIVQDATKYMRHSKRDQLKTTDIDA 109
Query: 47 --------PIYGL------TVSQFLPFKHASG---------GGRELHFTDEKEVDFEDLL 83
PIYG S + K+ +G G LH+ +++E+DF+ +L
Sbjct: 110 ALRARNIEPIYGFLPSSSGRSSTNIASKYTAGPTFRRVQTSSGVPLHYVEDEEIDFDKIL 169
Query: 84 TNLNPKSALETHLR--THWLAIEGVQPTVPENPPPV 117
PK + + HWLAIEGVQP VP+NP P+
Sbjct: 170 -EAGPKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPI 204
>gi|343424876|emb|CBQ68414.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Sporisorium reilianum SRZ2]
Length = 725
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFL------PFKHASG---------G 174
K M HSKR +L DID AL +NIEPIYG S P ++ +G
Sbjct: 95 KYMRHSKRDQLKTTDIDAALRARNIEPIYGFLPSSSGRSGASNPSRYTAGPTFRRVQTAS 154
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLR--THWLAIEGVQPTVPENPPPVDKSAQK 232
G LH+ +++E+DF+ +L PK + + HWLAIEGVQP VP+NP P+ + K
Sbjct: 155 GVPLHYVEDEEIDFDKIL-EAGPKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAK 213
Query: 233 LESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHV-KQLATHELSVEQQLYYKEITEA 291
S +G + +AK + + + K L H LS E QLYY+ +T++
Sbjct: 214 GGS----GFMGPTSTQPAAAAPAAKAVTVAGGDGQAIAKPLVKHILSRELQLYYERLTKS 269
Query: 292 CV 293
V
Sbjct: 270 IV 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 50/183 (27%)
Query: 289 TEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGV-------------------- 328
T A GS R AL SL DPGLH+++P + F+ V
Sbjct: 335 TFAQKGSGNHVRDAALASLRGDPGLHQLVPYLIQFVGSKVIEILRSPSTDDSAADADGAS 394
Query: 329 ---------KVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLC 379
+++ N++ L L+ + A+L N +++E YLH+++PSILS +++ L
Sbjct: 395 TATAVRESRQISAADNHM--LSVLLSTIHAILVNPHIFIEPYLHQMMPSILSILLTSSLA 452
Query: 380 GRPE------------------ADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLS 421
PE + +ALR AS LLT V F +S ++ RV L
Sbjct: 453 -EPELLRQLQGSDDVHTPLVTAGPSSYALRAHASALLTHVVDTFGSSYPTLKPRVVATLL 511
Query: 422 NAI 424
A+
Sbjct: 512 KAL 514
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 47/156 (30%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ ++++ +AES+GI + + A L+ ++ Y + I+Q
Sbjct: 53 YPTDTIRDVAESVGINGMKESVAAALAADVEYRIREIVQDATKYMRHSKRDQLKTTDIDA 112
Query: 47 --------PIYGLTVSQFL------PFKHASG---------GGRELHFTDEKEVDFEDLL 83
PIYG S P ++ +G G LH+ +++E+DF+ +L
Sbjct: 113 ALRARNIEPIYGFLPSSSGRSGASNPSRYTAGPTFRRVQTASGVPLHYVEDEEIDFDKIL 172
Query: 84 TNLNPKSALETHLR--THWLAIEGVQPTVPENPPPV 117
PK + + HWLAIEGVQP VP+NP P+
Sbjct: 173 -EAGPKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPI 207
>gi|71019437|ref|XP_759949.1| hypothetical protein UM03802.1 [Ustilago maydis 521]
gi|46099495|gb|EAK84728.1| hypothetical protein UM03802.1 [Ustilago maydis 521]
Length = 701
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGL------TVSQFLPFKHASG---------G 174
K M HSKR +L +DID AL +NIEPIYG S P ++ +G
Sbjct: 95 KYMRHSKRDQLKTIDIDAALRARNIEPIYGFLPSSSGRSSASDPSRYTAGPTFRRVQTAS 154
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHL--RTHWLAIEGVQPTVPENPPPVDKSAQK 232
G LH+ +++E+DF+ +L P+ + + HWLAIEGVQP VP+NP P+ + K
Sbjct: 155 GVPLHYVEDEEIDFDKIL-EAGPRIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAK 213
Query: 233 LESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHV-KQLATHELSVEQQLYYKEITEA 291
S +G + +AK + + + K L H LS E QLYY+ +T++
Sbjct: 214 GVS----GFMGPSSTQPTTAAPAAKAVTVAGGDGQAIAKPLVKHILSRELQLYYERLTKS 269
Query: 292 CV 293
V
Sbjct: 270 IV 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 50/183 (27%)
Query: 289 TEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGV-------------------- 328
T A GS R AL SL DPGLH+++P + F+ V
Sbjct: 328 TFAQKGSGNHVRDAALASLRGDPGLHQLVPYLIQFVGSKVIETLRSPSQDDTAAASDGSS 387
Query: 329 ---------KVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLC 379
+++ N++ L L+ V A+L N +++E YLH+++PSILS +++ L
Sbjct: 388 AAMAVRESQQISTADNHM--LGVLLSTVHAILVNPHIFVEPYLHQMMPSILSILLTSSLA 445
Query: 380 GRPEA--------DNH----------WALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLS 421
PE D H ++LR AS LLT V + F +S ++ RV L
Sbjct: 446 -EPELLRLSQGMNDGHRPLVTAGPSSYSLRAHASALLTHVVETFGSSYPTLKPRVVATLL 504
Query: 422 NAI 424
A+
Sbjct: 505 KAL 507
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 47/156 (30%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ ++++ +AES+GI ++ + A L+ ++ Y + I+Q
Sbjct: 53 YPTDTIRDVAESLGINSMKESVAAALAADVEYRIREIVQDAAKYMRHSKRDQLKTIDIDA 112
Query: 47 --------PIYGLTVSQFL------PFKHASG---------GGRELHFTDEKEVDFEDLL 83
PIYG S P ++ +G G LH+ +++E+DF+ +L
Sbjct: 113 ALRARNIEPIYGFLPSSSGRSSASDPSRYTAGPTFRRVQTASGVPLHYVEDEEIDFDKIL 172
Query: 84 TNLNPKSALETHLR--THWLAIEGVQPTVPENPPPV 117
P+ + + HWLAIEGVQP VP+NP P+
Sbjct: 173 -EAGPRIGIGRGVGWGAHWLAIEGVQPAVPQNPSPI 207
>gi|395544394|ref|XP_003774095.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 1
[Sarcophilus harrisii]
Length = 276
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E + G + LP + A G +L+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPAREG--DLYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCPETAVRVHVSYLDGKGNVEPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ GVK V ++L L L+++ ++LL N L L Y+ L+
Sbjct: 183 LQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLLRNPHLCLGPYVRSLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
S+L C++ ++HW LRD A+ LL+ +
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHI 274
>gi|308486980|ref|XP_003105686.1| CRE-TAF-6.1 protein [Caenorhabditis remanei]
gi|308255142|gb|EFO99094.1| CRE-TAF-6.1 protein [Caenorhabditis remanei]
Length = 314
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 313 LHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSC 372
L LP + I + + N+ Q L+L+IY R++++L N++ + LH ++PS+LSC
Sbjct: 101 LSVFLPYLTERICKSISANISQRCLSLIIYAGRVLRSLSLNKACDMTVSLHHVIPSLLSC 160
Query: 373 IVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNA---INDPKI 429
V + +C RPE DNHWALRDF+++ L + ++ + RL A D
Sbjct: 161 CVGRNMCLRPETDNHWALRDFSAKTLVMLVRD-QVDKRDAGFTARRLFDFAHRIFRDSAS 219
Query: 430 NFPSLYGAI 438
+F +YG I
Sbjct: 220 SFSMIYGTI 228
>gi|443686648|gb|ELT89843.1| hypothetical protein CAPTEDRAFT_177124 [Capitella teleta]
Length = 387
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 136/332 (40%), Gaps = 71/332 (21%)
Query: 122 QKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFT 181
++L + + M H KR KL D++ AL K+ PI G G +H+
Sbjct: 52 RELVQVGCQYMEHGKRRKLSVADLNRALLQKDCAPICG------------HGSPDSVHWV 99
Query: 182 DEKEV------DFEDLLTNLNPKSALETH-----LRTHWLAIEGVQPTVPENPPPVDKSA 230
KE D + LL N S L T L+ W+A+EG Q T P + PV
Sbjct: 100 HVKEAEVTAAEDNDVLLGNFACNSELPTRNGNVSLQAQWIAVEGFQKTNPASNTPV---- 155
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITE 290
TS KP RN L E Q +Y+ +T+
Sbjct: 156 ------------------TSAKP--------RN-------------LLEELQHHYELLTK 176
Query: 291 ACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKAL 350
A + D AL+ L T+ + +L + FI G++ + ++ L+ L+ V +L
Sbjct: 177 AILSCDSLLTHSALEDLKTNTRIVPLLRNLVNFITNGIR--KLNHDPCRLLCLLYAVNSL 234
Query: 351 LDNQSLYLEK--YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLT-QVSKNFNT 407
L N+ +YLE Y+ L+ + C V + W +RD+A+RLL +
Sbjct: 235 LRNKIIYLESQPYMAVLVDCVRHCAVEPLSQSSKSRFDQWIMRDYAARLLAFMIQSVLKV 294
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAIA 439
++ +VT+ L+ + DP F S YGA++
Sbjct: 295 PVIKLKHQVTQGLNKILADPTKPFCSHYGAVS 326
>gi|334332576|ref|XP_003341613.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
2 [Monodelphis domestica]
Length = 590
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 124/314 (39%), Gaps = 77/314 (24%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E + G + LP + A G +L+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPAREG--DLYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H +S L K
Sbjct: 109 LVELALATNIPKGCPETAVRVH------------------------------VSYLDGKG 138
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
NVE A L+ + YY+++T A +G D
Sbjct: 139 ----------------NVEPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDD---------- 172
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
P++ +KV V ++L L L+++ ++LL N L L Y+ L+
Sbjct: 173 -----------PQL-------MKVKSVSHDLEQLHRLLQVARSLLRNPHLCLGPYVRSLV 214
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + N + ++ L + D
Sbjct: 215 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVNGLSQQILLSLQKVLAD 274
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 275 PVRPLCSHYGAVVG 288
>gi|346975529|gb|EGY18981.1| transcription initiation factor TFIID subunit 6 [Verticillium
dahliae VdLs.17]
Length = 394
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R L DI AL + ++EP+YG ++ L + AS G G+ L++ +++EV
Sbjct: 53 ALRFMRAARRTTLTVGDIAQALRVLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEV 112
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQ 231
DFE L+ PK + HWLAIEGVQP++P+NP + +Q
Sbjct: 113 DFEKLINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQ 157
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 30/148 (20%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++K +AES+GI +L +DA + L+ + Y +
Sbjct: 16 ENVKDVAESVGISSLNEDALRVLTQDAEYRIGQVVIEALRFMRAARRTTLTVGDIAQALR 75
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L + AS G G+ L++ +++EVDFE L+ PK + HW
Sbjct: 76 VLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEVDFEKLINAPLPKVPRDMSFTAHW 135
Query: 101 LAIEGVQPTVPENPPPVDKSAQKLESIS 128
LAIEGVQP++P+NP + +Q IS
Sbjct: 136 LAIEGVQPSIPQNPTTAESRSQDQHIIS 163
>gi|302408599|ref|XP_003002134.1| transcription initiation factor TFIID complex 60 kDa subunit
[Verticillium albo-atrum VaMs.102]
gi|261359055|gb|EEY21483.1| transcription initiation factor TFIID complex 60 kDa subunit
[Verticillium albo-atrum VaMs.102]
Length = 398
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEV 186
+ + M ++R L DI AL + ++EP+YG ++ L + AS G G+ L++ +++EV
Sbjct: 127 ALRFMRAARRTTLTVGDIAQALRVLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEV 186
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP 223
DFE L+ PK + HWLAIEGVQP++P+NP
Sbjct: 187 DFEKLINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNP 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 30/134 (22%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY----------------------------CCK 42
E++K +AES+GI +L +DA + L+ + Y +
Sbjct: 90 ENVKDVAESVGISSLNEDALRVLTQDAEYRIGQVVIEALRFMRAARRTTLTVGDIAQALR 149
Query: 43 VI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
V+ ++P+YG ++ L + AS G G+ L++ +++EVDFE L+ PK + HW
Sbjct: 150 VLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEVDFEKLINAPLPKVPRDMSFTAHW 209
Query: 101 LAIEGVQPTVPENP 114
LAIEGVQP++P+NP
Sbjct: 210 LAIEGVQPSIPQNP 223
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 258 LEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEML 317
+E L E+ + L Q LYY E DE FE L + A P +
Sbjct: 153 VEPLYGYESTRPLRYGEASLGPGQPLYYLE--------DEEVDFEKLIN-APLP----KV 199
Query: 318 PRMCTFIA-----EGVKVNVVQNNLALLIYLMRMV--KALLDNQSLYLEKYLHELLPSIL 370
PR +F A EGV+ ++ QN + + +AL++N +L+L+ Y + + +L
Sbjct: 200 PRDMSFTAHWLAIEGVQPSIPQNPTHRRVPKPGVATERALIENTNLFLDPYANAIAAPVL 259
Query: 371 SCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKIN 430
+C++ ++L + + LR+F++ LL +++ + S + ++ ++ R DP
Sbjct: 260 TCLLGRKLGADDATKDQYELREFSASLLGKIALRYAASNHLLRPKLVRTCLKFFMDPDKL 319
Query: 431 FPSLYGAIAG 440
+ YGAI G
Sbjct: 320 PAAHYGAITG 329
>gi|297688428|ref|XP_002821688.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L [Pongo abelii]
Length = 623
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 52/275 (18%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY ++T A +G D ALQ
Sbjct: 149 --------------------------AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQD 182
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L T+ + +LP ++ G K V ++L L L+++ ++L N L L Y+ L+
Sbjct: 183 LQTNSKIGALLPYF-VYVVSGXKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLV 239
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
S+L C++ ++HW LRD A+ LL+ +
Sbjct: 240 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHI 274
>gi|444711067|gb|ELW52021.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Tupaia chinensis]
Length = 820
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 123/314 (39%), Gaps = 77/314 (24%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 293 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 350
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
DL N PK ET +R H ++G P+ P
Sbjct: 351 LVDLALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 390
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D
Sbjct: 391 --------------------------AVSSLTDDLLKYYQQVTRAVLGDD---------- 414
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
P++ +KV V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 415 -----------PQL-------MKVKSVSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLV 456
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 457 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLAD 516
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 517 PVRPLCSHYGAVVG 530
>gi|198433140|ref|XP_002128118.1| PREDICTED: similar to MGC80584 protein [Ciona intestinalis]
Length = 515
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 149/336 (44%), Gaps = 50/336 (14%)
Query: 104 EGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS 163
+ V+ T+ E+ V ++L S S + H++R +LL D++ AL + I+G S
Sbjct: 35 DAVKQTLAED---VSYRLRELVSKSTTFLRHARRKRLLANDVNRALYWSDTPAIHG--SS 89
Query: 164 QFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP 223
L FK + ++H + ++ D + ++ + A + L +
Sbjct: 90 NTLDFKQVA----DVHVPIDPTINLRDEIFDIELRPASSSTLSS---------------- 129
Query: 224 PPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL 283
VD S K E + +L ++ + S + T +L+ + Q
Sbjct: 130 --VDVSCDKEEPM----QLSEQSELDSEQETEVRLQP-------NTDQFTK--------- 167
Query: 284 YYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
YY + E+ + ++ E L L ++P + +P TF+ K ++V ++L L ++
Sbjct: 168 YYSTLVESLLTDNKPVFCEMLTDLRSNPRVAPCVPYFVTFLT---KASLVSHDLDKLSWM 224
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
+ +KA+L N +L L YL+ LL S + C++ ++HW LRD+ +R++TQ+
Sbjct: 225 LYTMKAMLMNPNLSLVDYLNPLLSSAMYCVLEPLAASINPLNDHWLLRDYGARIITQIVH 284
Query: 404 NFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIA 439
+ T + V N ++DP S YGA+A
Sbjct: 285 QYPQKTEEMLGSVKVATRNVLSDPTKPLCSQYGALA 320
>gi|295317365|ref|NP_001171269.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L isoform 2 [Mus musculus]
Length = 598
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 77/314 (24%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--DLYFPEDREVS 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 155
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D
Sbjct: 156 --------------------------AVSSLTDDLLKYYQQVTRAVLGDD---------- 179
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
P++ +KV V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 180 -----------PQL-------MKVKSVSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 221
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 222 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTD 281
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 282 PVRPLCSHYGAVVG 295
>gi|148701423|gb|EDL33370.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, isoform CRA_b [Mus musculus]
Length = 604
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 77/314 (24%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV
Sbjct: 64 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--DLYFPEDREVS 121
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 122 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 161
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D
Sbjct: 162 --------------------------AVSSLTDDLLKYYQQVTRAVLGDD---------- 185
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
P++ +KV V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 186 -----------PQL-------MKVKSVSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 227
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 228 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTD 287
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 288 PVRPLCSHYGAVVG 301
>gi|26345988|dbj|BAC36645.1| unnamed protein product [Mus musculus]
Length = 591
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 77/314 (24%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--DLYFPEDREVS 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDD---------- 172
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
P++ +KV V ++L L L+++ ++L+ N L L Y+ L+
Sbjct: 173 -----------PQL-------MKVKSVSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLV 214
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
S+L C++ ++HW LRD A+ LL+ + + + ++ L + D
Sbjct: 215 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTD 274
Query: 427 PKINFPSLYGAIAG 440
P S YGA+ G
Sbjct: 275 PVRPLCSHYGAVVG 288
>gi|238598036|ref|XP_002394498.1| hypothetical protein MPER_05606 [Moniliophthora perniciosa FA553]
gi|215463610|gb|EEB95428.1| hypothetical protein MPER_05606 [Moniliophthora perniciosa FA553]
Length = 233
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYG------LTVSQFLPFKHASGG---GRELHF 180
K M H R L DID AL + NIEP+YG T + LPF SGG ++F
Sbjct: 35 KFMRHGCRTTLTTADIDQALRVLNIEPLYGHSPYAPPTFRRALPF--VSGGLAPAGSVYF 92
Query: 181 TDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 235
+++E+DF+ +L HWLA+EGVQP +PENPP + + E+
Sbjct: 93 VEDEEIDFDRVLREEKITLPKGVSWTAHWLAVEGVQPLIPENPPAIPREGDVPET 147
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 45 IQPIYG------LTVSQFLPFKHASGG---GRELHFTDEKEVDFEDLLTNLNPKSALETH 95
I+P+YG T + LPF SGG ++F +++E+DF+ +L
Sbjct: 59 IEPLYGHSPYAPPTFRRALPF--VSGGLAPAGSVYFVEDEEIDFDRVLREEKITLPKGVS 116
Query: 96 LRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
HWLA+EGVQP +PENPP + + E+
Sbjct: 117 WTAHWLAVEGVQPLIPENPPAIPREGDVPET 147
>gi|323309179|gb|EGA62406.1| Taf6p [Saccharomyces cerevisiae FostersO]
Length = 209
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP 223
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNP 152
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 34/138 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKEL----------------------------SDNITYCCK 42
+++K +A S+G+ N+ DD K L +D+++ +
Sbjct: 15 DTVKDVAGSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALR 74
Query: 43 VI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHL 96
V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+ P+
Sbjct: 75 VLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTF 134
Query: 97 RTHWLAIEGVQPTVPENP 114
THWLA+EGVQP + +NP
Sbjct: 135 TTHWLAVEGVQPAIIQNP 152
>gi|430814304|emb|CCJ28448.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 180
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG----GGRELHFTDE 183
+ K M H+KR L DI AL + N+EP+YG F P + G L++ ++
Sbjct: 46 AMKFMRHAKRTILTVSDISHALRVLNVEPLYGY--HAFRPVRFGESLLEQGQPPLYYLED 103
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSA 230
+V+F+ ++ PK + HWLAIEGVQP +P+NP D S
Sbjct: 104 DDVEFDKVIHAPLPKVPRDISYSVHWLAIEGVQPAIPQNPSVSDTSV 150
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 35/144 (24%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ------------------------ 46
+++K +AESIGI L D AK L+ +I Y +IQ
Sbjct: 9 DTVKDVAESIGISQLDDSVAKVLALDIEYRIHEVIQEAMKFMRHAKRTILTVSDISHALR 68
Query: 47 -----PIYGLTVSQFLPFKHASG----GGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P+YG F P + G L++ ++ +V+F+ ++ PK +
Sbjct: 69 VLNVEPLYGY--HAFRPVRFGESLLEQGQPPLYYLEDDDVEFDKVIHAPLPKVPRDISYS 126
Query: 98 THWLAIEGVQPTVPENPPPVDKSA 121
HWLAIEGVQP +P+NP D S
Sbjct: 127 VHWLAIEGVQPAIPQNPSVSDTSV 150
>gi|297267614|ref|XP_002799526.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Macaca
mulatta]
Length = 593
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 52/285 (18%)
Query: 157 IYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGV 215
+ G + LP + A G EL+F +++EV+ +L N PK ET +R H ++G
Sbjct: 51 VCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGK 108
Query: 216 QPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATH 275
P+ P A
Sbjct: 109 GNLAPQGSVPS----------------------------------------------AVS 122
Query: 276 ELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN 335
L+ + YY ++T A +G D ALQ L T+ + +LP ++ GVK V +
Sbjct: 123 SLTDDLLKYYHQVTRAVLGDDPQLMKVALQDLQTNSKIGALLPYF-VYVVSGVKS--VSH 179
Query: 336 NLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFAS 395
+L L L+++ ++L N L L Y+ L+ S+L C++ ++HW LRD A+
Sbjct: 180 DLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLNDHWTLRDGAA 239
Query: 396 RLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LL+ + + + + L + DP YGA+ G
Sbjct: 240 LLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVG 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFKHASGGGRELH 70
ES++++AES G+ L D+ A L++++ Y + Q + G + LP + A G EL+
Sbjct: 15 ESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQAVCGYGSQEALPMRPAREG--ELY 71
Query: 71 FTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 116
F +++EV+ +L N PK ET +R H ++G P+ P
Sbjct: 72 FPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 118
>gi|119594502|gb|EAW74096.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_c [Homo
sapiens]
Length = 509
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 284 YYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
YY ++T A +G D ALQ L T+ + +LP ++ GVK V ++L L L
Sbjct: 47 YYHQVTRAVLGDDPQLMKVALQDLQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRL 103
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
+++ ++L N L L Y+ L+ S+L C++ ++HW LRD A+ LL+ +
Sbjct: 104 LQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFW 163
Query: 404 NFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+ + + L + DP YGA+ G
Sbjct: 164 THGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVG 200
>gi|395544396|ref|XP_003774096.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 2
[Sarcophilus harrisii]
Length = 251
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 77/275 (28%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N+E + G + LP + A G +L+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPAREG--DLYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCPETAVRVHVSYLDGKGNVEPQGSVPS-------------------- 148
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
A L+ + YY+++T A +G D
Sbjct: 149 --------------------------AVSSLTDDLLKYYQQVTRAVLGDD---------- 172
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
P++ +KV V ++L L L+++ ++LL N L L Y+ L+
Sbjct: 173 -----------PQL-------MKVKSVSHDLEQLHRLLQVARSLLRNPHLCLGPYVRSLV 214
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
S+L C++ ++HW LRD A+ LL+ +
Sbjct: 215 GSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHI 249
>gi|196006796|ref|XP_002113264.1| hypothetical protein TRIADDRAFT_57235 [Trichoplax adhaerens]
gi|190583668|gb|EDV23738.1| hypothetical protein TRIADDRAFT_57235 [Trichoplax adhaerens]
Length = 450
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 69/322 (21%)
Query: 122 QKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFT 181
+ L ++ + M HSKR +++ D++ A + +E IYG+ ++ FK + ++++
Sbjct: 65 RHLIQVASEVMIHSKRTRMMTDDVNKAAKLCRLESIYGINGTEADQFKCVTFKDSKIYYL 124
Query: 182 DEKEVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS 240
D+KEV+ +L+ N P T +R HWL I G
Sbjct: 125 DDKEVNLHNLIMNDEIPNDPGRTSVRAHWLPISG-------------------------- 158
Query: 241 KLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
S K S ++L ++K + S E QL
Sbjct: 159 ---------SLKQNSINWQQLNTANNTYLKAVLQGLKSQEPQLV---------------- 193
Query: 301 FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
+ +L T+ + +LP + ++ +K + + ++ ++++++N+SL L
Sbjct: 194 LTIMNNLRTNSHVTVILPYVLYYLISSIKSH------THVARCLQSIQSIIENKSLTLLP 247
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
YL +L+ +++C + N W LR+ ++ LL +++ + S+ N+ +T L
Sbjct: 248 YLVQLVSVLMTCTLDDH-----RMANSWHLRNKSAMLLALLAREYKKSSPNVCNNITNKL 302
Query: 421 SN--AIND-PKINFPSLYGAIA 439
A ND P+ S YGAI
Sbjct: 303 REVLASNDKPRF---SHYGAIV 321
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 30/128 (23%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
S+ +MK A+ +G + D+ A LS++ +Y + +IQ
Sbjct: 31 LSLSTMKQWADQLGFGEVNDEVAALLSEDASYRIRHLIQVASEVMIHSKRTRMMTDDVNK 90
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLR 97
IYG+ ++ FK + ++++ D+KEV+ +L+ N P T +R
Sbjct: 91 AAKLCRLESIYGINGTEADQFKCVTFKDSKIYYLDDKEVNLHNLIMNDEIPNDPGRTSVR 150
Query: 98 THWLAIEG 105
HWL I G
Sbjct: 151 AHWLPISG 158
>gi|119936348|gb|ABM06111.1| TAF6-like RNA polymerase II [Bos taurus]
Length = 291
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
AL L T+ + +LP ++ GVK V ++L L L+++ ++L+ N L L Y+
Sbjct: 4 ALHDLQTNSKIAALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLVRNPHLCLVPYV 60
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
L+ S+L C++ ++HW LRD A+ LL+ + + N + ++ L
Sbjct: 61 RSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTYGDLVNGLYQQILLSLQK 120
Query: 423 AINDPKINFPSLYGAIAG 440
+ DP S YGA+ G
Sbjct: 121 VLADPVRPLCSHYGAVVG 138
>gi|223996869|ref|XP_002288108.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977224|gb|EED95551.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 505
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 185 EVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPP----PVDKSAQKLESID-- 237
+D L + N P E + HWLA++GV P + N V+ ++L S D
Sbjct: 128 RIDLNAYLNSDNLPPPPTELGMTLHWLAVDGVMPLLRMNDVWNGFGVEGGRKELYSRDVA 187
Query: 238 PISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG--S 295
P+ +L + D + + +S + +++L LS E QLY+ +IT S
Sbjct: 188 PLVQLDENDNNNNNPDSS-----------IRIRELQHRLLSEELQLYFSKITTVLSNPNS 236
Query: 296 DEGRRFEALQSLATDPGLHEMLPRMCTFIAEGV--KVNVVQNNLALLIYLMRMVKALLDN 353
L + TD G+ E++P + F+A G+ K + + L+ + A+LDN
Sbjct: 237 PPMEVSSILNGIRTDGGIQELVPFLSRFVASGLMEKKKGGGGGIGMARRLVGLFDAMLDN 296
Query: 354 QSLYLEKYLHELLPSILSCIVSKQLCGRPEAD----NHWALRDFASRLLTQVSKNFNTST 409
SL+L+ +LH+L I +CIV+K+L H++LR A+ L + +++
Sbjct: 297 ASLHLDLHLHQLFTPIGTCIVAKKLSSTSTIQYYDPTHYSLRYEAAASLVKACTIYSSQY 356
Query: 410 NNIQTRVTRLLSNA---INDPKINFPSLYGAIAGEGLVTERS 448
++ R+ +LL+ I+ P + + YG I G L R+
Sbjct: 357 TTMKPRIIKLLTQQALRIDRPLV---TQYGGIVGLSLFGARA 395
>gi|402223220|gb|EJU03285.1| TAF-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 487
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 41/320 (12%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRE----LHFTDE 183
+ + M H+KR L DID AL NIEP+YG + S L F+ E ++ ++
Sbjct: 70 AVRYMKHAKRTVLTTADIDLALRNLNIEPLYGHSPSVPLSFRRFQPNHSEAKSFVYAVED 129
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLG 243
+EVD E ++ K E ++ HWLA+EGVQ
Sbjct: 130 EEVDLERVVRERRVKVPREVGVKPHWLAVEGVQ--------------------------- 162
Query: 244 KKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA 303
+ P ++ + R L + QLY+ + A + D+ RR A
Sbjct: 163 PLIPENPPPPPTSHTQTDRPSSPSSPPSSLPSSLPLPLQLYHTRLLSALLSPDDARRAAA 222
Query: 304 LQSLATDPGLHEMLPRMCTFIAEGVKVNVV---QNNLALLIYLMRMVKALLDNQSLYLEK 360
L SLA D GL ++P + ++ E V + + + A+L + M+ ++ N++++LE
Sbjct: 223 LASLAADAGLQLLVPNLVNWVGERVTRELARAEEGDPAVLQVALGMIGSMAKNENIFLEP 282
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL 420
YLH++ + + + P +LR A+ L Q+ ++ + +R+ + L
Sbjct: 283 YLHQI---LPPLLSLLLVHPHPAP----SLRPVAASTLHQLITLYSPKYTTLASRLLKTL 335
Query: 421 SNAINDPKINFPSLYGAIAG 440
A+ +P+ P+ GA+ G
Sbjct: 336 LRALLEPERALPTRAGAVRG 355
>gi|219116616|ref|XP_002179103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409870|gb|EEC49801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 498
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 141/333 (42%), Gaps = 41/333 (12%)
Query: 137 RVKLLPVDIDDALNMKNIEPIYGLTVSQFLP--FKHASGGGRELHF--------TDEKEV 186
R +L DI+ AL M+ E +Y + +P H S + V
Sbjct: 73 RRRLHAADINLALQMRQSEKLYA---TALVPPDTVHPSSMSTTTTTDNPDHSLPASHRPV 129
Query: 187 DFEDLL--TNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
+ D L L + E L WLA++G+ P + + + S P++ +
Sbjct: 130 NLADFLRHAQLPFQQPAEVALHVSWLAVDGIAPEPHPHGVVGAWTDRHTPSPHPLAMPHE 189
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEAC-----VGSDEGR 299
+ + ++A L V+QL LS E QLY+ +T A S
Sbjct: 190 NNNHHNPYQSTAPQAWL-------VQQLQAAMLSEELQLYFTRVTYALDNTTNTHSPTSA 242
Query: 300 RFE--ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLY 357
R + L LA D L E++P ++ + + + V + A +R+V+A+L N +L+
Sbjct: 243 RAQDRLLDRLAVDAHLQELVPFFARYVTQTLYASHVTHQRA----AVRLVQAMLHNPTLH 298
Query: 358 LEKYLHELLPSILSCIVS-------KQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTN 410
LE YLHEL+P++L+ IV+ ++ A HW LR AS L V + F
Sbjct: 299 LELYLHELVPALLTAIVADHRDRTNQRTSVAVTATPHWRLRVEASVALRTVCRQFGPEYP 358
Query: 411 NIQTRVTRLLSNAINDPKINFPSLYGAIAGEGL 443
+Q RV R L A+ P + P+++G + L
Sbjct: 359 TLQARVLRTLCQALG-PDRSRPAVFGGLTAVTL 390
>gi|392311681|pdb|4ATG|A Chain A, Taf6 C-Terminal Domain From Antonospora Locustae
Length = 196
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGV---- 328
+H L E QLY+ +I + + SD + A++ L + GL +++P I+E +
Sbjct: 1 GSHMLPKELQLYFDKIL-SMIKSD--MKDIAIECLEKESGLQQLVPYFIQHISELILKSF 57
Query: 329 -KVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNH 387
+ V++ +AL +L+ N+ ++++ YLH++LPS+L+C++ G+ D+
Sbjct: 58 KEAEVLKTCIALYF-------SLIKNKHVFIDPYLHQILPSLLTCVI-----GKSIVDDD 105
Query: 388 WALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
+R ++ ++ + ++ S + RV + L DP + S YGA+
Sbjct: 106 --VRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGAL 154
>gi|402583132|gb|EJW77076.1| hypothetical protein WUBG_12014 [Wuchereria bancrofti]
Length = 197
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 29/122 (23%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ I +KV+AES+GI L D A +++ TY K++ +
Sbjct: 76 YGISYVKVVAESVGIAGLSDVCASQIAVQTTYAVKMVTEQAKKFAVHGRRKRVTAEDIDS 135
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRT 98
P++G TV + LPF+ A GR+L TD+++++ ++ K LET+++
Sbjct: 136 AFTMGGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDIEITPVVNAPAAKLPLETNIKC 195
Query: 99 HW 100
+
Sbjct: 196 KF 197
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K H +R ++ DID A M P++G TV + LPF+ A GR+L TD+++++
Sbjct: 118 KFAVHGRRKRVTAEDIDSAFTMGGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDIEIT 177
Query: 190 DLLTNLNPKSALETHLRTHW 209
++ K LET+++ +
Sbjct: 178 PVVNAPAAKLPLETNIKCKF 197
>gi|123435741|ref|XP_001309034.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890742|gb|EAX96104.1| hypothetical protein TVAG_014960 [Trichomonas vaginalis G3]
Length = 393
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 42/248 (16%)
Query: 127 ISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG---GRELHFTDE 183
I+F+ SHSK KL +++DAL N PI G + + K+ S G G+E++ ++
Sbjct: 19 INFQRQSHSK--KLTVENVNDALVAYNYNPILGYRNRKGI--KYVSVGLVDGQEVYIPED 74
Query: 184 KEVDFEDLLTNLNPKSALETHLRTHWLA-IEGVQPTVPENPPPVDKSAQKLESIDPISKL 242
K++D + P + +E HW A ++GVQP +PEN +
Sbjct: 75 KQIDLNTFINKPLPPTPIEKFFSFHWQACLKGVQPQIPEN-------------------I 115
Query: 243 GKKDKDTSGKP-TSAKLEKLRNV-ETVHVKQLATHELSVEQQLY--YKEITEACVGSDEG 298
++ +D+ P T +L+K + ++VH+ + V+ LY Y I S E
Sbjct: 116 AEQTRDSYSAPITVGQLQKAKMTDQSVHI---ISSRNDVDTDLYNTYMNIFNKSPSSPEV 172
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
+++ D + +LP +I + + Q+ LI +++ +AL+ N + +
Sbjct: 173 DVL--CKNMEKDSAISPILP----YIMHELSSDYTQHQ--DLILRIKIAEALIQNNFIPI 224
Query: 359 EKYLHELL 366
E YL L+
Sbjct: 225 ENYLISLI 232
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 60 KHASGG---GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA-IEGVQPTVPEN 113
K+ S G G+E++ ++K++D + P + +E HW A ++GVQP +PEN
Sbjct: 57 KYVSVGLVDGQEVYIPEDKQIDLNTFINKPLPPTPIEKFFSFHWQACLKGVQPQIPEN 114
>gi|170595895|ref|XP_001902561.1| Transcription initiation factor TFIID subunit 6 [Brugia malayi]
gi|158589697|gb|EDP28589.1| Transcription initiation factor TFIID subunit 6, putative [Brugia
malayi]
Length = 158
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 8 FSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ--------------------- 46
+ I +KV+AES+GI L D A +++ TY K++ +
Sbjct: 39 YGISYVKVVAESVGIAGLSDVCASQIAVQTTYAVKMVTEQAKKFAVHGRRKRVTAEDIDS 98
Query: 47 --------PIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLR 97
P++G TV + LPF+ A GR+L TD+++++ ++ K LET+++
Sbjct: 99 AFALGGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDIEITPVVNAPAAKLPLETNIK 157
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K H +R ++ DID A + P++G TV + LPF+ A GR+L TD+++++
Sbjct: 81 KFAVHGRRKRVTAEDIDSAFALGGYPPLFGFTVKEGLPFRFAGSMGRDLFVTDDRDIEIT 140
Query: 190 DLLTNLNPKSALETHLR 206
++ K LET+++
Sbjct: 141 PVVNAPAAKLPLETNIK 157
>gi|1942937|pdb|1TAF|B Chain B, Drosophila Tbp Associated Factors Dtafii42DTAFII62
HETEROTETRAMER
Length = 70
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 2 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQ 45
>gi|355752016|gb|EHH56136.1| PCAF-associated factor 65-alpha [Macaca fascicularis]
Length = 412
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 303 ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYL 362
ALQ L T+ + +LP ++ GVK V ++L L L+++ ++L N L L Y+
Sbjct: 51 ALQDLQTNSKIGALLPYF-VYVVSGVKS--VSHDLEQLHRLLQVARSLFRNPHLCLGPYV 107
Query: 363 HELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSN 422
L+ S+L C++ ++HW LRD A+ LL+ ++ S + + L
Sbjct: 108 RCLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHITHGDLVS--GLYQHILLSLQK 165
Query: 423 AINDPKINFPSLYGAIAG 440
+ DP YGA+ G
Sbjct: 166 ILADPVRPLCCHYGAVVG 183
>gi|321455519|gb|EFX66649.1| hypothetical protein DAPPUDRAFT_262799 [Daphnia pulex]
Length = 106
Score = 52.0 bits (123), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 260 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
+L N++ +KQL T +LSVEQQLY KEITEACV SD+ RR
Sbjct: 9 QLTNLKQKQIKQL-TAQLSVEQQLYCKEITEACVCSDQARR 48
>gi|321460909|gb|EFX71946.1| hypothetical protein DAPPUDRAFT_255080 [Daphnia pulex]
Length = 181
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 260 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
+L N++ +KQLA +LSVEQQLY KEITEACV SD+ RR
Sbjct: 9 QLTNLKQKQIKQLAA-QLSVEQQLYCKEITEACVCSDQARR 48
>gi|332250027|ref|XP_003274155.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L [Nomascus leucogenys]
Length = 629
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEK 184
E+ M H+KR KL D + AL ++E + G + LP + A G EL+F +++
Sbjct: 46 EATQLSVMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAKEG--ELYFPEDR 103
Query: 185 EVDFEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
EV+ +L N PK ET +R H ++G P+ P
Sbjct: 104 EVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 145
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 329 KVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHW 388
+V V ++L+ L+++ ++L N L L Y+ L+ S+L C++ ++HW
Sbjct: 209 QVGVQWHDLSSPHRLLQVARSLFXNPHLCLGPYVRCLVGSVLYCVLEPLAASINPXNDHW 268
Query: 389 ALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
LRD A+ LL+ + + + + L + DP YGA+ G
Sbjct: 269 TLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVG 320
>gi|321449826|gb|EFX62093.1| hypothetical protein DAPPUDRAFT_271035 [Daphnia pulex]
Length = 181
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 260 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR 300
+L N++ +KQL T +LSVEQQLY KEITEACV SD+ RR
Sbjct: 9 QLTNLKQKQIKQL-TAQLSVEQQLYCKEITEACVCSDQARR 48
>gi|300176085|emb|CBK23396.2| unnamed protein product [Blastocystis hominis]
Length = 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 49/253 (19%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHF-----TDEKEV 186
M H +R KL DI+ L + N + I G S R D K V
Sbjct: 38 MEHCRRTKLTAGDIEKMLYIYNFDKILGYK-------NRRSEMQRSFMLLSDKSNDSKIV 90
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
++ + P+ +ET + +W +EG Q I ++G+ D
Sbjct: 91 SVNHIIESEVPELPMETSFKVNWFVVEGNQ-------------------IQYRKEMGEDD 131
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
D+ V + + H LS E +LY K+I S+E E
Sbjct: 132 DDSDDS------------PDVQLLSQSIHSLSFECELYLKKIKSRLYSSEEENT-EVFHQ 178
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNN----LALLIYLMRMVKALLDNQSLYLEKYL 362
L TD GL+++ P + ++ + ++Q +A L Y+++++ +LL N+ L++ Y+
Sbjct: 179 LQTDEGLNQICPYLVDWVQSTTQ-KIIQQKPVRMVAYLRYIIQLIHSLLLNRHLHIVSYV 237
Query: 363 HELLPSILSCIVS 375
+ P LS S
Sbjct: 238 SLVSPFPLSSTSS 250
>gi|154416709|ref|XP_001581376.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915603|gb|EAY20390.1| hypothetical protein TVAG_110020 [Trichomonas vaginalis G3]
Length = 434
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 137/321 (42%), Gaps = 31/321 (9%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG-GGRELHFTDEKEV 186
SF+ S+ K++ + D+ +A N + P G + + ++ G + +K++
Sbjct: 49 SFQIQSNHKKLSV--EDVSEAFNARGFNPFLGYRNRKAIKYETVGQVGDTVISIPVDKQL 106
Query: 187 DFEDLLTNLNPKSALETHLRTHWLA-IEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK 245
D +++ ++ E HWLA I G QP +PEN ++ + G
Sbjct: 107 DLSEIVNTPLKETPTEKFFSFHWLAVIRGQQPLIPEN-------------LNDTTVPGST 153
Query: 246 DKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQ 305
+ P KL ++V Q+ + V Q+LY + ++ L+
Sbjct: 154 HNNIYAPPPQMKLSD----QSV---QITSTRNEVSQELYTHYYHLIAPNVNPRKKIPLLK 206
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
L +D + +LP +++ N A + + +AL+ N +L L+ YL ++
Sbjct: 207 ELQSDAAIIPLLPYFFHYLSSHYSSNNSNITAAFDDRI-NLARALILNDNLKLDMYLIQI 265
Query: 366 LP-SILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVT-RLLSNA 423
+ SI S ++S P ++ ++LR+ ++ LL+ V ++ ++TR+T L+
Sbjct: 266 INLSITSLLMS---FNDPVVES-FSLRENSAELLSLVINKYSQIYPTLRTRITDHLVKTF 321
Query: 424 INDPKINFPSLYGAIAGEGLV 444
I+ NF GA G ++
Sbjct: 322 IDRKNGNFQVKLGAAIGLSVI 342
>gi|300120019|emb|CBK19573.2| Transcription initiation factor TFIID (subunit D5) [Blastocystis
hominis]
Length = 349
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 46/240 (19%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKE-----V 186
M H +R KL DI+ L + N + I G S R L +K V
Sbjct: 100 MEHCRRTKLTAGDIEKMLYIYNFDKILGYK-------NRRSEMQRSLMVLADKSNTSNIV 152
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
++ + P+ LET + +W +EG Q I + ++G+ D
Sbjct: 153 SVNHIIESEVPELPLETSFKVNWFVVEGNQ-------------------IQYLKEMGEDD 193
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
P V+ + + H LS E +LY K+I S+E E
Sbjct: 194 DSPDDSPD---------VQLLSQSTRSVHSLSFECELYLKKIKSRLYSSEE-ENTEVFHQ 243
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNN----LALLIYLMRMVKALLDNQSLYLEKYL 362
L TD GL+++ P + ++ + ++Q +A L Y+++++ +LL N+ L++ Y+
Sbjct: 244 LQTDEGLNQICPYLVDWVQSTTQ-KIMQKKPVRMVAYLRYIIQLIHSLLLNRHLHIVSYV 302
>gi|160331582|ref|XP_001712498.1| taf [Hemiselmis andersenii]
gi|159765946|gb|ABW98173.1| taf [Hemiselmis andersenii]
Length = 419
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMC-----TFIAEGVKVNVVQNN 336
+ +YK + + L+SL+ D GL ++P + F+A+ QN
Sbjct: 171 RYFYKYFITVFEKGSQKEQLACLESLSEDDGLFSIIPYIIIYINQIFMAKN------QNV 224
Query: 337 LALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASR 396
L L Y ++++ AL+ ++ ++H++ P +++CI+ K+ G E + + L+ F+ +
Sbjct: 225 LKLK-YGIKIIYALIWKNYHKMQPFIHQIFPILINCIIGKRFSGIKEDEQY--LKYFSVK 281
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
+++ + F +S + +++++T L S + + N L G + G
Sbjct: 282 IVSLIFFRFGSSYSGLKSKITFLFSKQLLNSLKNIKYLIGPLMG 325
>gi|241746522|ref|XP_002414284.1| hypothetical protein IscW_ISCW012210 [Ixodes scapularis]
gi|215508138|gb|EEC17592.1| hypothetical protein IscW_ISCW012210 [Ixodes scapularis]
Length = 378
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 30/123 (24%)
Query: 284 YYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
YY+E+T A +GSDE + V+V + ++LA L L
Sbjct: 54 YYEEVTVALLGSDE----------------------------QLVEVRKLSHDLANLDRL 85
Query: 344 MRMVKALLDNQSLYL--EKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
+R V AL N +L+L Y L+ ++L C++ ++HWALRD A+RLL +
Sbjct: 86 LRTVHALAHNPNLFLNTRPYPTLLVQALLFCLLEPLAAAINPVNDHWALRDSAARLLASL 145
Query: 402 SKN 404
K+
Sbjct: 146 LKS 148
>gi|119594501|gb|EAW74095.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_b [Homo
sapiens]
gi|194375247|dbj|BAG62736.1| unnamed protein product [Homo sapiens]
Length = 148
Score = 48.1 bits (113), Expect = 0.010, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPE 221
+L N PK ET +R H ++G P+
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQ 143
>gi|241746524|ref|XP_002414285.1| hypothetical protein IscW_ISCW012211 [Ixodes scapularis]
gi|215508139|gb|EEC17593.1| hypothetical protein IscW_ISCW012211 [Ixodes scapularis]
Length = 117
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFKHASGG 65
+ FS +S+ + AES GI ++ A L++++ Y + + QP+YG + LPF+H
Sbjct: 23 SQFSRDSILLFAESYGISDVSQQALAVLTEDLNYRLRELAQPVYGCSGPDPLPFRHVREA 82
Query: 66 GRELHFTDEKEVDF 79
E++ TD+ VD
Sbjct: 83 --EVYCTDDHTVDL 94
>gi|71026272|ref|XP_762817.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349769|gb|EAN30534.1| hypothetical protein TP03_0693 [Theileria parva]
Length = 649
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 302 EALQSLATDPGLHEMLPRMC-TFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
+ ++ L GL ++LP +C FI E ++N Q + + I L++ V+AL NQ++ +
Sbjct: 293 KVVEILRNSLGLDQLLPELCHLFINEINRINSNQPSFNIHI-LLQYVEALTSNQNIQIHH 351
Query: 361 YLHELLPSILSCIVSKQLCGRP-EADNHWALRDFASRLLTQVS---KNFNTSTNNIQTRV 416
Y+H+LL +L ++S ++ P + LR +S+ ++ +S K N +I +
Sbjct: 352 YVHQLLIPLLQVLLSCEMDTNPIQIYRSLLLRKLSSQCISNISFSLKKNNNGLESIDDYL 411
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
L N + + P LYGA+ G
Sbjct: 412 MNLYKNELTNENCTLPVLYGALCG 435
>gi|156313396|ref|XP_001617873.1| hypothetical protein NEMVEDRAFT_v1g225715 [Nematostella vectensis]
gi|156196248|gb|EDO25773.1| predicted protein [Nematostella vectensis]
Length = 135
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 207 THWLAIEGVQPTVPENPPPVDKSAQKLESIDPI---------SKLGKK------DKDTSG 251
HWL+IEG+QP +PENPPP K E P+ +K G+K D ++
Sbjct: 44 AHWLSIEGLQPAIPENPPPALADQLKREEQKPVFTTKAAPDKTKPGQKRPKAEVDSKSNK 103
Query: 252 KPTSAK--LEKLRNVETVHVKQLATHELSV 279
KP K + + + + K L THELSV
Sbjct: 104 KPAITKHTISSIPSNKADKTKGLVTHELSV 133
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 98 THWLAIEGVQPTVPENPPPV 117
HWL+IEG+QP +PENPPP
Sbjct: 44 AHWLSIEGLQPAIPENPPPA 63
>gi|449269236|gb|EMC80031.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L, partial [Columba livia]
Length = 202
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 22/176 (12%)
Query: 284 YYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEG---------------- 327
YY +T A +G D ALQ + + LP +G
Sbjct: 27 YYHHVTCAVLGDDAQLMKVALQDQQNNAKITAFLPCFVYAAKQGECGASDEVQPNSCVSL 86
Query: 328 ------VKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGR 381
+V + ++L L ++ + LL N L+L Y+ L S+L C++
Sbjct: 87 NSWVPPSQVKSISHDLPQLHLVLHVAHGLLHNPFLFLGPYVRSLSSSVLYCVLEPLAASI 146
Query: 382 PEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGA 437
++HW LR +++ LL ++ + + + + L A+ DP S GA
Sbjct: 147 NPLNDHWPLRSYSAMLLGRIFWTHGEAVSGLCQYILLALHKALADPVCPLCSHCGA 202
>gi|123432184|ref|XP_001308370.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890047|gb|EAX95440.1| hypothetical protein TVAG_243280 [Trichomonas vaginalis G3]
Length = 438
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 122/315 (38%), Gaps = 27/315 (8%)
Query: 127 ISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEV 186
I+ +C KR KL DI+ AL +EP++G + SQ P G +L D+
Sbjct: 48 IAHRC----KRTKLTVADINVALESLRLEPLFGYS-SQQEPNVVDVNGDNKLLVYDDSFA 102
Query: 187 DFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKD 246
E P L TH W+A+ G+ EN ++ S +KLE + L K+
Sbjct: 103 QLEQYARRELPAYPLATHFDVVWIALNGIG---HENLETMELSNEKLE-----NTLNKQH 154
Query: 247 KDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQS 306
K + + N+ H+ S Q ++ + S R
Sbjct: 155 NQQRQKTQDSDYFVVSNI----------HQFSYVNQKFFGASGSFLMSSKIVDRELMFSK 204
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSL-YLEKYLHEL 365
L+ + ++P F V+ N+ L + V+AL+ N L Y+ Y+
Sbjct: 205 LSVLDCIQTLVPYYIRF--SLVQFKDHPNDWDTLYSSLCTVRALVQNPKLEYINCYIQSF 262
Query: 366 LPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
+ LS +++ ++ R A +R+ A+ L + + + +Q +T L + +
Sbjct: 263 ITIALSFLLNPEIL-RTNAIALVRMRELAAEFLLVICDKLSNTYPMVQPHITAQLISVLI 321
Query: 426 DPKINFPSLYGAIAG 440
+ + +GA G
Sbjct: 322 EHDYSVSEKFGAFCG 336
>gi|85001335|ref|XP_955386.1| hypothetical protein [Theileria annulata]
gi|65303532|emb|CAI75910.1| hypothetical protein TA17760 [Theileria annulata]
Length = 648
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 312 GLHEMLPRMC-TFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSIL 370
GL ++LP +C FI E ++ ++ + + L++ V+AL NQ++ + Y+H+LL +L
Sbjct: 302 GLDQLLPELCHLFINEINRLKTDHSSFNIHV-LLQYVEALTTNQNIQIHHYVHQLLIPLL 360
Query: 371 SCIVSKQLCGRP-EADNHWALRDFASRLLTQVSKNFNTSTNNIQT---RVTRLLSNAIND 426
++S ++ P + LR +S+ ++ +S + + N +++ + L N + +
Sbjct: 361 QVLLSSEMDTNPIQIYKSLLLRKLSSQCISNISSSLKKNNNGLESIDDYLMNLYKNELTN 420
Query: 427 PKINFPSLYGAIAG 440
+ P LYGA+ G
Sbjct: 421 ENCSLPVLYGALCG 434
>gi|449662645|ref|XP_004205586.1| PREDICTED: uncharacterized protein LOC101237825 [Hydra
magnipapillata]
Length = 281
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLA-LLIYLMRMVKALLDNQSLYLEKYLHEL 365
L ++ L +LP + TF+ +K+ + + + +L +++ + AL++N S+ L Y+ EL
Sbjct: 3 LRSNNKLQVVLPHLITFLCSKIKLTTAKKSFSSVLGFVLLAINALIENDSVLLVPYIFEL 62
Query: 366 LPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIN 425
+ S+L + +LC W + A+ +L ++ ++ N+ ++ ++L+ +
Sbjct: 63 MKSVLIVVSDVKLCVEE-----WNIHHTAAFVLVKICSKYSVIHPNLLYQLLKMLNEKLT 117
Query: 426 DPKINFPSLYGAIAG 440
+ SL+G I+
Sbjct: 118 SA-LPIESLFGVISS 131
>gi|167521926|ref|XP_001745301.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776259|gb|EDQ89879.1| predicted protein [Monosiga brevicollis MX1]
Length = 141
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 259 EKLRNVETVHVKQLATHELSVEQQLYYKEITEACV------GSDEGRRFE--ALQSLATD 310
++ ++ E V L+ H LS EQQL YK I + + + +G +F AL+SL D
Sbjct: 58 QQQQDQEGATVVGLSRHLLSKEQQLLYKHIIQGAMMRVGEHNTKQGNQFRENALRSLRED 117
Query: 311 PGLHEMLPRMCTFIA 325
PGL ++LP F+A
Sbjct: 118 PGLQQLLPFFIEFVA 132
>gi|156087741|ref|XP_001611277.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798531|gb|EDO07709.1| conserved hypothetical protein [Babesia bovis]
Length = 633
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEIT----EACVGSDEGRRFE- 302
D +GK T+ + K+ H L+ EQ+ + KEI +A D +
Sbjct: 251 DKNGKQTAITIPKVE------------HILTKEQRFFLKEIKNTVKKASTTMDHQVHVQL 298
Query: 303 --ALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK 360
L L P L ++LP + F V ++ + +++ +A+ N + +
Sbjct: 299 GKVLSILRKSPALDQLLPELAAFF-----VAELEQPTGDVEAILKFAEAITSNTKIQIHY 353
Query: 361 YLHELLPSILSCIVSKQLCGRPEADN-HWALRDFASRLLTQVSKNF---NTSTNNIQTRV 416
++H+L+ +L ++ + +A N + + R A++ + +++ NT I +
Sbjct: 354 HIHQLVAPLLKLMLKQDDKEDIQAINRNLSFRKLAAKTVGNLARALRESNTGLEGIDQYL 413
Query: 417 TRLLSNAINDPKINFPSLYGAIAG 440
+L I DPK + LYGA+ G
Sbjct: 414 MKLYKKTILDPKCSITMLYGAMCG 437
>gi|238503231|ref|XP_002382849.1| TATA binding protein associated factor, putative [Aspergillus
flavus NRRL3357]
gi|220691659|gb|EED48007.1| TATA binding protein associated factor, putative [Aspergillus
flavus NRRL3357]
Length = 132
Score = 42.0 bits (97), Expect = 0.68, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M HS+R L DI AL + ++EP+YG ++ L F AS G G+ L
Sbjct: 38 AQVLEE-ALKFMRHSRRTLLTTQDIAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLF 96
Query: 180 FTDEKE 185
+ +++E
Sbjct: 97 YVEDEE 102
>gi|118377997|ref|XP_001022175.1| TATA box binding protein associated factor [Tetrahymena
thermophila]
gi|89303942|gb|EAS01930.1| TATA box binding protein associated factor [Tetrahymena thermophila
SB210]
Length = 522
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 47/221 (21%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKN-IEPIYGLTVSQFLPF-KHASGGGRELHFTDEKE 185
S K M H KR KL D++ AL +N + I+G VS+ + F KHA+ ++ ++E
Sbjct: 45 SIKFMKHFKRDKLTTSDVEYALKDRNYYDKIFGYDVSEKVSFKKHANYWIKQ-----DEE 99
Query: 186 VDFEDLL---TNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKL 242
D + L + ++ + W++I+G P + EN +K+A I K
Sbjct: 100 RDLQSYLEAQVKSLKRQVMQPTVTAWWMSIDGKIPPINENKFIKNKAA--------ILKY 151
Query: 243 GKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDE----- 297
+ K+ K + +K R++ LS E ++ EIT+ ++E
Sbjct: 152 DELKKEEYSKNFNIIKDKPRSL------------LSEEINKFFVEITKVIAETEEQIDNP 199
Query: 298 -----GRRFEA-------LQSLATDPGLHEMLPRMCTFIAE 326
G F L +L T+ GL +LP + ++ +
Sbjct: 200 KLNLPGAPFRETPKLKIILNNLKTNSGLTSLLPFLLNYLYQ 240
>gi|399218371|emb|CCF75258.1| unnamed protein product [Babesia microti strain RI]
Length = 945
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 302 EALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLM-RMVKALLDNQSLYLEK 360
+ L L+T L +++P + F A + +++ +N+L + +M AL+ N ++
Sbjct: 618 KVLHILSTSLALDQLMPELSYFFATQMDIHM-KNSLPHAVSIMLSFAYALISNPHAHIHF 676
Query: 361 YLHELLPSILSCIVSKQLCGRPEADNH--WALRDFASRLLTQVSKNFNTSTNN---IQTR 415
++H+LL I+ + K C P + LR A+ L+ +++ +S N I ++
Sbjct: 677 HIHQLLIPIIQVAIGK--CEFPIVLIYQILRLRKKAANLVGKIAFVLRSSRNGLEFIDSQ 734
Query: 416 VTRLLSNAINDPKINFPSLYGAIA 439
+ LL A++ +I+ +LYG+IA
Sbjct: 735 LILLLKQALSADEISIFTLYGSIA 758
>gi|401396226|ref|XP_003879782.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325114189|emb|CBZ49747.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 956
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 263 NVETVHVKQLATHELSVEQQLYYKEITEACV-------GSDEGRRF-EALQSLATDPGLH 314
++E + V H L E Q + + + E G D R F + L+ +++ PGL
Sbjct: 465 SLERILVAPRLCHALGKEHQQFLQAVRETLQAAMEEKHGVDYERNFRKMLKIVSSIPGLE 524
Query: 315 EMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIV 374
++LP + F A V++ + L+R+ +A+L N L L ++H+ L ++ C++
Sbjct: 525 QLLPCLARFFA--VELGGCLHLPHRATLLLRLAEAILANPHLPLHSHVHQFLLPLMECLL 582
>gi|342883095|gb|EGU83654.1| hypothetical protein FOXB_05818 [Fusarium oxysporum Fo5176]
Length = 324
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 289 TEACVGSDEGRRF---------EALQSLATDPGLHEMLPRMCTFIAEGVK---------V 330
++A G D RF E LQ +ATD ++L + +F +K +
Sbjct: 4 SQADSGVDHDERFRHEVLKGFAEDLQYIATDKDKQDLLTSIKSFALHFIKEPLKRPMADL 63
Query: 331 NVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWAL 390
+ VQ NL +L Y+ +D+ SL+ ++ + LL + +V K+L +W
Sbjct: 64 STVQQNLDVLWYMFFKASTAMDSDSLFQDRLVLLLLWTRQFDLVYKELYTGQNISRNWES 123
Query: 391 RDFASRLLT----QVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLY 435
FA L T V + ++ T ++L++ I + +I+ L+
Sbjct: 124 YGFAQSLQTFWEALVKEGSEAELRSLATFSAKVLASGICEDQISSTGLW 172
>gi|123489292|ref|XP_001325361.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908259|gb|EAY13138.1| hypothetical protein TVAG_444210 [Trichomonas vaginalis G3]
Length = 403
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 109/271 (40%), Gaps = 39/271 (14%)
Query: 178 LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESID 237
++F ++ +V +++ + + +H + W + G + E + K+ I
Sbjct: 95 IYFAEDTKVPLQNITQEVQKEPQRASHFKFQWKMVNGAK--FDEAAMKNSFNTDKVGMIA 152
Query: 238 PISKLGK----KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQL--YYKEITEA 291
PI+ + ++ D S K + KL S+ + L Y+ + T+
Sbjct: 153 PITNIFANQFAQNTDFSTKAENTKL-------------------SLPEDLIDYFNDATDI 193
Query: 292 CVGSDEGRRFEALQ----SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV 347
F+ L+ L TD G +LP + + + +N + +I + R
Sbjct: 194 L----SSENFDTLEFVYPKLQTDIGTAPLLPFFLKYFYAEIAEYL--DNSSRMIPVARAT 247
Query: 348 KALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNT 407
AL+ N L + Y+H L ++ +S+ + N +R A ++ + K ++
Sbjct: 248 LALVSNTYLPISLYVHSFLK--IAFTLSQTVVVTNNLINDECIRQTAGDIIIALIKRASS 305
Query: 408 STNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
I+T + L +P+ N+P+LYGA+
Sbjct: 306 EYPGIRTEIFNQLVGVSFNPETNYPALYGAL 336
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,061,535,672
Number of Sequences: 23463169
Number of extensions: 294606066
Number of successful extensions: 809292
Number of sequences better than 100.0: 520
Number of HSP's better than 100.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 806670
Number of HSP's gapped (non-prelim): 1282
length of query: 448
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 302
effective length of database: 8,933,572,693
effective search space: 2697938953286
effective search space used: 2697938953286
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)