Your job contains 1 sequence.
>psy11212
MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFK
HASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKS
AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHF
TDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS
KLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRR
FEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEK
YLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLL
SNAINDPKINFPSLYGAIAGEGLVTERS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11212
(448 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010417 - symbol:Taf6 "TBP-associated factor 6" sp... 1144 1.5e-127 2
ZFIN|ZDB-GENE-040912-23 - symbol:taf6 "TAF6 RNA polymeras... 985 1.7e-105 2
UNIPROTKB|Q91857 - symbol:taf6 "Transcription initiation ... 961 4.1e-102 2
UNIPROTKB|Q58DG7 - symbol:TAF6 "TBP-associated factor 6 i... 928 3.4e-93 1
UNIPROTKB|E2RFB9 - symbol:TAF6 "Uncharacterized protein" ... 928 3.4e-93 1
UNIPROTKB|J9NS44 - symbol:TAF6 "Uncharacterized protein" ... 928 3.4e-93 1
UNIPROTKB|J3KR72 - symbol:TAF6 "Transcription initiation ... 926 5.5e-93 1
UNIPROTKB|P49848 - symbol:TAF6 "Transcription initiation ... 926 5.5e-93 1
RGD|1311608 - symbol:Taf6 "TAF6 RNA polymerase II, TATA b... 923 1.1e-92 1
MGI|MGI:109129 - symbol:Taf6 "TAF6 RNA polymerase II, TAT... 923 1.1e-92 1
UNIPROTKB|G8JLM6 - symbol:TAF6 "Transcription initiation ... 816 2.5e-81 1
TAIR|locus:2010667 - symbol:TAFII59 "TATA BOX ASSOCIATED ... 356 2.1e-64 3
DICTYBASE|DDB_G0288471 - symbol:taf6 "TATA-binding protei... 342 5.6e-57 3
POMBASE|SPCC16C4.18c - symbol:taf6 "histone H4-like TAF T... 511 6.9e-55 2
ASPGD|ASPL0000017134 - symbol:AN8232 species:162425 "Emer... 474 1.6e-49 2
UNIPROTKB|C9JTY6 - symbol:TAF6 "Transcription initiation ... 481 7.9e-46 1
FB|FBgn0014342 - symbol:mia "meiosis I arrest" species:72... 418 3.7e-39 1
UNIPROTKB|C9JFL8 - symbol:TAF6 "Transcription initiation ... 367 9.5e-34 1
CGD|CAL0005584 - symbol:TAF60 species:5476 "Candida albic... 251 8.0e-33 2
UNIPROTKB|Q5A2V7 - symbol:TAF6 "Putative uncharacterized ... 251 8.0e-33 2
SGD|S000003080 - symbol:TAF6 "Subunit (60 kDa) of TFIID a... 274 1.8e-32 2
WB|WBGene00006387 - symbol:taf-6.1 species:6239 "Caenorha... 345 2.0e-31 1
UNIPROTKB|E5RHA1 - symbol:TAF6 "Transcription initiation ... 290 2.6e-30 2
ZFIN|ZDB-GENE-030131-6789 - symbol:taf6l "TAF6-like RNA p... 206 2.3e-22 3
UNIPROTKB|F1MDZ8 - symbol:TAF6L "Uncharacterized protein"... 184 4.6e-21 3
UNIPROTKB|I3LPI1 - symbol:TAF6L "Uncharacterized protein"... 180 1.0e-20 3
UNIPROTKB|E2QUN8 - symbol:TAF6L "Uncharacterized protein"... 180 2.1e-20 3
MGI|MGI:2444957 - symbol:Taf6l "TAF6-like RNA polymerase ... 184 2.1e-20 3
UNIPROTKB|E5RKA5 - symbol:TAF6 "Transcription initiation ... 192 5.2e-19 2
UNIPROTKB|Q9Y6J9 - symbol:TAF6L "TAF6-like RNA polymerase... 167 7.9e-19 3
WB|WBGene00021363 - symbol:taf-6.2 species:6239 "Caenorha... 252 4.3e-18 2
UNIPROTKB|C9JIS2 - symbol:TAF6 "Transcription initiation ... 206 5.5e-16 1
RGD|1310123 - symbol:Taf6l "TAF6-like RNA polymerase II, ... 133 3.6e-15 3
UNIPROTKB|C9J088 - symbol:TAF6 "Transcription initiation ... 198 4.1e-15 1
UNIPROTKB|C9J7C4 - symbol:TAF6 "Transcription initiation ... 179 4.9e-13 1
UNIPROTKB|F8WEJ7 - symbol:TAF6 "Transcription initiation ... 170 4.6e-12 1
UNIPROTKB|E9PP94 - symbol:TAF6L "TAF6-like RNA polymerase... 121 3.8e-10 2
>FB|FBgn0010417 [details] [associations]
symbol:Taf6 "TBP-associated factor 6" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
EMBL:AE014296 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022008
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0005669
GO:GO:0051123 eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486
EMBL:AY051702 EMBL:U06459 EMBL:L25443 RefSeq:NP_524161.2
UniGene:Dm.2802 PDB:1TAF PDBsum:1TAF ProteinModelPortal:P49847
SMR:P49847 DIP:DIP-772N DIP:DIP-778N IntAct:P49847 MINT:MINT-755268
STRING:P49847 PaxDb:P49847 EnsemblMetazoa:FBtr0074941 GeneID:40134
KEGG:dme:Dmel_CG32211 CTD:6878 FlyBase:FBgn0010417
InParanoid:P49847 OMA:KQLATHE OrthoDB:EOG434TN9 PhylomeDB:P49847
EvolutionaryTrace:P49847 GenomeRNAi:40134 NextBio:817166
Bgee:P49847 GermOnline:CG32211 Uniprot:P49847
Length = 606
Score = 1144 (407.8 bits), Expect = 1.5e-127, Sum P(2) = 1.5e-127
Identities = 213/312 (68%), Positives = 260/312 (83%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFE 189
K M+H+KR KL DID +L ++N+EP YG F+PF+ ASGGGRELHFT++KE+D
Sbjct: 63 KFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLG 122
Query: 190 DLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKK-DKD 248
++ + + K L+ LR+HW +EGVQPTVPENPPP+ K +Q L+S++P+ K+ + +KD
Sbjct: 123 EITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKD 182
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLA 308
+GKPT+ K+ KL+NVET+HVKQLATHELSVEQQLYYKEITEACVGSDE RR EALQSL
Sbjct: 183 AAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLG 242
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
+DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMV+ALLDN SL+LEKYLHEL+PS
Sbjct: 243 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 302
Query: 369 ILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPK 428
+++CIVSKQLC RPE DNHWALRDFASRL+ Q+ KNFNT TNN+QTRVTR+ S A+ + K
Sbjct: 303 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 362
Query: 429 INFPSLYGAIAG 440
+ SLYG+IAG
Sbjct: 363 THLSSLYGSIAG 374
Score = 269 (99.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 59/134 (44%), Positives = 85/134 (63%)
Query: 7 SFSIESMKVIAE--SIGIPNLPDDAAK--------ELS-DNITYCCKVI-IQPIYGLTVS 54
S S ++ K +AE SI + + DAAK +LS +I KV ++P YG
Sbjct: 37 SLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAK 96
Query: 55 QFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP 114
F+PF+ ASGGGRELHFT++KE+D ++ + + K L+ LR+HW +EGVQPTVPENP
Sbjct: 97 DFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENP 156
Query: 115 PPVDKSAQKLESIS 128
PP+ K +Q L+S++
Sbjct: 157 PPLSKDSQLLDSVN 170
Score = 129 (50.5 bits), Expect = 1.5e-127, Sum P(2) = 1.5e-127
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
+YG+S S ESMKVIAESIG+ +L DDAAKEL+++++ K I+Q
Sbjct: 16 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQ 59
>ZFIN|ZDB-GENE-040912-23 [details] [associations]
symbol:taf6 "TAF6 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-040912-23 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 KO:K03131 GeneTree:ENSGT00640000091486 CTD:6878
HOGENOM:HOG000253001 HOVERGEN:HBG012489 EMBL:BX927335
EMBL:CABZ01016379 EMBL:CR847545 EMBL:BC081612 IPI:IPI00491415
RefSeq:NP_001004557.1 UniGene:Dr.36557 STRING:Q66HZ5
Ensembl:ENSDART00000042901 GeneID:447818 KEGG:dre:447818
InParanoid:Q66HZ5 NextBio:20832342 Uniprot:Q66HZ5
Length = 636
Score = 985 (351.8 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 187/316 (59%), Positives = 239/316 (75%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M H KR KL DID AL +KN+EP+YG +F+PF+ ASGGGRELHF +EKEVD
Sbjct: 54 ALKFMHHGKRCKLTTGDIDHALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVD 113
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPIS--KLGKK 245
D++ P+ L+ L+ HWL+I+GVQP +PENPP K QK ES +P+ K G++
Sbjct: 114 LSDIINTPLPRVPLDVSLKAHWLSIDGVQPAIPENPPSASKEQQKAESTEPLKAVKPGQE 173
Query: 246 DKD-TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEAL 304
D+ K SA +++ E + +K +THELSVEQQLYYKEITEACVGS E +R EAL
Sbjct: 174 DEGFIQAKGQSAVSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEAL 233
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
QS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKYLHE
Sbjct: 234 QSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHE 293
Query: 365 LLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAI 424
L+P++++CIVSKQLC RP+ DNHWALRDFA+RL+ Q K F+T+TNNIQ+R+T+ + A+
Sbjct: 294 LIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKAL 353
Query: 425 NDPKINFPSLYGAIAG 440
D K + + YG IAG
Sbjct: 354 LDEKTQWTTRYGCIAG 369
Score = 256 (95.2 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++P+YG +F+PF+ ASGGGRELHF +EKEVD D++ P+ L+ L+ HWL+I+
Sbjct: 80 VEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLKAHWLSID 139
Query: 105 GVQPTVPENPPPVDKSAQKLES 126
GVQP +PENPP K QK ES
Sbjct: 140 GVQPAIPENPPSASKEQQKAES 161
Score = 79 (32.9 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
+SMK +AES+GI +L +D+ LS+ ++Y K I Q
Sbjct: 17 DSMKAMAESVGIGSLQEDSCLTLSEEVSYRIKEIAQ 52
>UNIPROTKB|Q91857 [details] [associations]
symbol:taf6 "Transcription initiation factor TFIID subunit
6" species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0071339
GO:GO:0051090 KO:K03131 CTD:6878 HOVERGEN:HBG012489 EMBL:D50054
EMBL:BC068776 PIR:JC4366 RefSeq:NP_001081232.1 UniGene:Xl.3836
ProteinModelPortal:Q91857 GeneID:397724 KEGG:xla:397724
Xenbase:XB-GENE-5774722 Uniprot:Q91857
Length = 618
Score = 961 (343.3 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 186/321 (57%), Positives = 241/321 (75%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
+ K M KR KL P DID AL +KN+EPIYG +FLPF++ASGGGRELHF +EKE D
Sbjct: 52 ALKFMHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETD 111
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDP--ISKLGKK 245
D+++ P+ L+ L+ HWL+IEGVQP +PENPPPV K QK E+ +P ++K G++
Sbjct: 112 LSDIISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQE 171
Query: 246 D----KDTSGKPTSAKLEKLRNVE--TVHVKQLATHELSVEQQLYYKEITEACVGSDEGR 299
+ K K +K +E + +K + HELSVEQQLYYKEITEACVGS E +
Sbjct: 172 EGLPGKGQGSGEGKGKEKKTAILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK 231
Query: 300 RFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLE 359
R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLE
Sbjct: 232 RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLE 291
Query: 360 KYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRL 419
KYLHEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ KNF+T+TNNIQ+R+T+
Sbjct: 292 KYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKT 351
Query: 420 LSNAINDPKINFPSLYGAIAG 440
+ D + + + YG+IAG
Sbjct: 352 FTKTWVDDRTPWTTRYGSIAG 372
Score = 270 (100.1 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 46/82 (56%), Positives = 61/82 (74%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++PIYG +FLPF++ASGGGRELHF +EKE D D+++ P+ L+ L+ HWL+IE
Sbjct: 78 VEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSLKAHWLSIE 137
Query: 105 GVQPTVPENPPPVDKSAQKLES 126
GVQP +PENPPPV K QK E+
Sbjct: 138 GVQPAIPENPPPVPKEQQKTEA 159
Score = 71 (30.1 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 3 IYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
I T ESMKVI+ES+GI + ++ + L+ +++ K + Q
Sbjct: 7 IGNTLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQ 50
>UNIPROTKB|Q58DG7 [details] [associations]
symbol:TAF6 "TBP-associated factor 6 isoform alpha"
species:9913 "Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OMA:QEETCQL EMBL:DAAA02058286 EMBL:BT021630
IPI:IPI00717822 RefSeq:NP_001015525.1 UniGene:Bt.13917
STRING:Q58DG7 Ensembl:ENSBTAT00000054282 GeneID:505638
KEGG:bta:505638 InParanoid:Q58DG7 NextBio:20867237 Uniprot:Q58DG7
Length = 678
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 186/339 (54%), Positives = 246/339 (72%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 160
Query: 235 SIDPI--SKLGKK-DKDTSGK-----PTSAK-LEK----LRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G++ D GK P K EK L + +K + HELSVEQ
Sbjct: 161 ATEPLKSAKPGQEEDGPLKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 220
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 280
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 281 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 340
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 341 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 257 (95.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 125 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 211 AIEGVQPTVPENPPP 225
A+ G +P E+PPP
Sbjct: 642 ALCGGKPEAGESPPP 656
>UNIPROTKB|E2RFB9 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00640000091486 OMA:QEETCQL EMBL:AAEX03004275
Ensembl:ENSCAFT00000023284 NextBio:20862962 Uniprot:E2RFB9
Length = 698
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 186/339 (54%), Positives = 246/339 (72%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 61 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 120
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 121 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 180
Query: 235 SIDPI--SKLGKK-DKDTSGK-----PTSAK-LEK----LRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G++ D GK P K EK L + +K + HELSVEQ
Sbjct: 181 ATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 240
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 241 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 300
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 301 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 360
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 361 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 399
Score = 257 (95.5 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 85 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 144
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 145 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 181
>UNIPROTKB|J9NS44 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 EMBL:AAEX03004275
RefSeq:XP_546964.2 Ensembl:ENSCAFT00000049298 GeneID:489846
KEGG:cfa:489846 Uniprot:J9NS44
Length = 678
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 186/339 (54%), Positives = 246/339 (72%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 160
Query: 235 SIDPI--SKLGKK-DKDTSGK-----PTSAK-LEK----LRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G++ D GK P K EK L + +K + HELSVEQ
Sbjct: 161 ATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 220
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 280
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 281 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 340
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 341 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 257 (95.5 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 125 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>UNIPROTKB|J3KR72 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051090 "regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 EMBL:AC073842 HGNC:HGNC:11540
OMA:QEETCQL ProteinModelPortal:J3KR72 Ensembl:ENST00000472509
Uniprot:J3KR72
Length = 734
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 185/339 (54%), Positives = 246/339 (72%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 98 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 157
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 158 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 217
Query: 235 SIDPI--SKLGKK-DKDTSGK---PTSA-------KLEKLRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G++ D GK T+A K L + +K + HELSVEQ
Sbjct: 218 ATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 277
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 278 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 337
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 338 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 397
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 398 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 436
Score = 257 (95.5 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 122 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 181
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 182 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 218
>UNIPROTKB|P49848 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0045786 "negative regulation of cell cycle"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] Reactome:REACT_71
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0008285 GO:GO:0016032 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:CH236956 EMBL:CH471091 GO:GO:0006368
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095
KO:K03131 CTD:6878 EMBL:L25444 EMBL:U31659 EMBL:AK300005
EMBL:CR627390 EMBL:AY149894 EMBL:BC018115 IPI:IPI00028579
IPI:IPI00376952 IPI:IPI00924712 RefSeq:NP_001177344.1
RefSeq:NP_005632.1 RefSeq:NP_647476.1 UniGene:Hs.489309
ProteinModelPortal:P49848 SMR:P49848 DIP:DIP-29288N DIP:DIP-773N
IntAct:P49848 MINT:MINT-1211769 STRING:P49848 PhosphoSite:P49848
DMDM:1729810 PaxDb:P49848 PRIDE:P49848 DNASU:6878
Ensembl:ENST00000344095 Ensembl:ENST00000437822
Ensembl:ENST00000452041 Ensembl:ENST00000453269 GeneID:6878
KEGG:hsa:6878 UCSC:uc003uti.3 GeneCards:GC07M099704 HGNC:HGNC:11540
HPA:HPA006566 MIM:602955 neXtProt:NX_P49848 PharmGKB:PA36315
HOGENOM:HOG000253001 HOVERGEN:HBG012489 InParanoid:P49848
OrthoDB:EOG4MKNG0 PhylomeDB:P49848 GenomeRNAi:6878 NextBio:26859
ArrayExpress:P49848 Bgee:P49848 CleanEx:HS_TAF6
Genevestigator:P49848 GermOnline:ENSG00000106290 Uniprot:P49848
Length = 677
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 185/339 (54%), Positives = 246/339 (72%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 160
Query: 235 SIDPI--SKLGKK-DKDTSGK---PTSA-------KLEKLRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G++ D GK T+A K L + +K + HELSVEQ
Sbjct: 161 ATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 220
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 280
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 281 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 340
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 341 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 257 (95.5 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 125 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>RGD|1311608 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA;ISO] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA;ISO] [GO:0045786 "negative
regulation of cell cycle" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1311608 GO:GO:0005737
GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367
GO:GO:0071339 GO:GO:0045786 GO:GO:0051090 GO:GO:0005669
GO:GO:0033276 eggNOG:COG5095 GeneTree:ENSGT00640000091486
HOGENOM:HOG000253001 HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0
OMA:QEETCQL EMBL:D49446 IPI:IPI00212680 UniGene:Rn.102447
ProteinModelPortal:Q63801 STRING:Q63801 PhosphoSite:Q63801
PRIDE:Q63801 Ensembl:ENSRNOT00000001829 UCSC:RGD:1311608
InParanoid:Q63801 Genevestigator:Q63801
GermOnline:ENSRNOG00000001355 Uniprot:Q63801
Length = 678
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 182/339 (53%), Positives = 242/339 (71%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 160
Query: 235 SIDPI--SKLGKKDKD-----------TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G+++ GK K L +K + HELSVEQ
Sbjct: 161 ATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQ 220
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 280
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 281 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 340
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 341 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 257 (95.5 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 125 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
Score = 39 (18.8 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 214 GVQPTVPENPPP 225
G QPT P +P P
Sbjct: 665 GSQPTGPSSPQP 676
>MGI|MGI:109129 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10090 "Mus musculus" [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 MGI:MGI:109129
GO:GO:0005737 GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0 EMBL:D49439 EMBL:BC058583
IPI:IPI00124566 PIR:JC4245 RefSeq:NP_033341.1 UniGene:Mm.248517
ProteinModelPortal:Q62311 SMR:Q62311 DIP:DIP-493N IntAct:Q62311
MINT:MINT-269059 STRING:Q62311 PhosphoSite:Q62311 PaxDb:Q62311
PRIDE:Q62311 Ensembl:ENSMUST00000048698 Ensembl:ENSMUST00000110936
GeneID:21343 KEGG:mmu:21343 UCSC:uc009aew.1 InParanoid:Q62311
OMA:QEETCQL NextBio:300524 Bgee:Q62311 Genevestigator:Q62311
GermOnline:ENSMUSG00000036980 Uniprot:Q62311
Length = 678
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 182/339 (53%), Positives = 242/339 (71%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 160
Query: 235 SIDPI--SKLGKKDKD-----------TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G+++ GK K L +K + HELSVEQ
Sbjct: 161 ATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQ 220
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
QLYYKEITEACVGS E +R EALQS+ATDPGL++MLPR TFI+EGV+VNVVQNNLALLI
Sbjct: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 280
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMVKAL+DN +LYLEKY+HEL+P++++CIVS+QLC RP+ DNHWALRDFA+RL+ Q+
Sbjct: 281 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 340
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
K+F+T+TNNIQ+R+T+ + + D K + + YG+IAG
Sbjct: 341 CKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAG 379
Score = 257 (95.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 125 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 214 GVQPTVPENPPP 225
G QPT P +P P
Sbjct: 665 GSQPTGPGSPQP 676
>UNIPROTKB|G8JLM6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011442 Pfam:PF07571
GO:GO:0005634 GO:GO:0005737 GO:GO:0051090 EMBL:AC073842
HGNC:HGNC:11540 ProteinModelPortal:G8JLM6 SMR:G8JLM6
Ensembl:ENST00000418432 Bgee:G8JLM6 Uniprot:G8JLM6
Length = 601
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 166/309 (53%), Positives = 215/309 (69%)
Query: 132 MSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDL 191
M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGREL+F +EKEVD D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 192 LTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSG 251
+ P+ L+ L+ A + Q P K Q E P+ G+ G
Sbjct: 61 INTPLPRVPLDVCLK----APKEQQKAEATEPLKSAKPGQ--EEDGPLKGKGQGATTADG 114
Query: 252 KPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDP 311
K K L + +K + HELSVEQQLYYKEITEACVGS E +R EALQS+ATDP
Sbjct: 115 KGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP 174
Query: 312 GLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILS 371
GL++MLPR TFI+EGV+VNVVQNNLALLIYLMRMVKAL+DN +LYLEKY+HEL+P++++
Sbjct: 175 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 234
Query: 372 CIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINF 431
CIVS+QLC RP+ DNHWALRDFA+RL+ Q+ K+F+T+TNNIQ+R+T+ + + D K +
Sbjct: 235 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 294
Query: 432 PSLYGAIAG 440
+ YG+IAG
Sbjct: 295 TTRYGSIAG 303
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 8 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 67
Query: 90 SALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDD 147
L+ L+ E +P P + K + + K P ++
Sbjct: 68 VPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEG 127
Query: 148 A-LNMKNIEPIYGLTVSQFLPFK 169
A L +K I+ L+V Q L +K
Sbjct: 128 APLRLKP-RSIHELSVEQQLYYK 149
>TAIR|locus:2010667 [details] [associations]
symbol:TAFII59 "TATA BOX ASSOCIATED FACTOR II 59"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA;ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009860
"pollen tube growth" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 EMBL:CP002684 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
GO:GO:0009860 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC004809 GO:GO:0051090 KO:K03131 HSSP:P49847 OMA:LEMIYSL
UniGene:At.46000 EMBL:AY050962 EMBL:AY091292 EMBL:AY463621
IPI:IPI00521178 PIR:A86183 RefSeq:NP_001030969.1 RefSeq:NP_171987.1
RefSeq:NP_849592.1 UniGene:At.47479 ProteinModelPortal:Q9MAU3
SMR:Q9MAU3 IntAct:Q9MAU3 STRING:Q9MAU3 PRIDE:Q9MAU3
EnsemblPlants:AT1G04950.1 EnsemblPlants:AT1G04950.2
EnsemblPlants:AT1G04950.3 GeneID:839370 KEGG:ath:AT1G04950
TAIR:At1g04950 InParanoid:Q9MAU3 PhylomeDB:Q9MAU3
ProtClustDB:CLSN2681958 ArrayExpress:Q9MAU3 Genevestigator:Q9MAU3
Uniprot:Q9MAU3
Length = 549
Score = 356 (130.4 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 76/189 (40%), Positives = 116/189 (61%)
Query: 253 PTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRF-EALQSLATDP 311
P K+ + ++ + V+ H LS E QLY+++I E + + EAL SLA+D
Sbjct: 146 PAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQKIAELAMSKSNPPLYKEALVSLASDS 205
Query: 312 GLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILS 371
GLH ++P FIA+ V + N+ LL LM +V++LL N +++E YLH+L+PS+++
Sbjct: 206 GLHPLVPYFTNFIADEVSNGL--NDFRLLFNLMHIVRSLLQNPHIHIEPYLHQLMPSVVT 263
Query: 372 CIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINF 431
C+VS++L G ADNHW LRDFA+ L++ + K + T +Q+R+TR L NA+ DPK
Sbjct: 264 CLVSRKL-GNRFADNHWELRDFAANLVSLICKRYGTVYITLQSRLTRTLVNALLDPKKAL 322
Query: 432 PSLYGAIAG 440
YGAI G
Sbjct: 323 TQHYGAIQG 331
Score = 268 (99.4 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 51/110 (46%), Positives = 72/110 (65%)
Query: 115 PPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
P V+ +++ + KCM HSKR L D+D ALN++N+EPIYG F+ A G
Sbjct: 31 PDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGH 90
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPP 224
R+L +TD++EVDF+D++ PK+ L+T + HWLAIEGVQP +PEN P
Sbjct: 91 -RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAP 139
Score = 179 (68.1 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIE 104
++PIYG F+ A G R+L +TD++EVDF+D++ PK+ L+T + HWLAIE
Sbjct: 70 VEPIYGFASGGPFRFRKAIGH-RDLFYTDDREVDFKDVIEAPLPKAPLDTEIVCHWLAIE 128
Query: 105 GVQPTVPENPP 115
GVQP +PEN P
Sbjct: 129 GVQPAIPENAP 139
Score = 71 (30.1 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
E+++VIA+SIGI NL +AA L+ ++ Y + I+Q
Sbjct: 7 ETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQ 42
Score = 40 (19.1 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 22/82 (26%), Positives = 30/82 (36%)
Query: 108 PTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNI-EPIY--GLTVSQ 164
P +NPP E S S S+ K+ A+ MK I + I+ L +
Sbjct: 464 PVENDNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGR 523
Query: 165 FLPFKHASGGGRELHFTDEKEV 186
L H G R L F E+
Sbjct: 524 LLVKLHELYGDRILPFIPSTEM 545
>DICTYBASE|DDB_G0288471 [details] [associations]
symbol:taf6 "TATA-binding protein-associated-factor"
species:44689 "Dictyostelium discoideum" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0000124 "SAGA complex" evidence=ISS] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 dictyBase:DDB_G0288471 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016568 GenomeReviews:CM000154_GR
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000111 GO:GO:0000124
GO:GO:0006367 GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131
OMA:EPLYGYD RefSeq:XP_636709.1 ProteinModelPortal:Q54IW7
STRING:Q54IW7 EnsemblProtists:DDB0231094 GeneID:8626641
KEGG:ddi:DDB_G0288471 InParanoid:Q54IW7 ProtClustDB:CLSZ2730274
Uniprot:Q54IW7
Length = 542
Score = 342 (125.4 bits), Expect = 5.6e-57, Sum P(3) = 5.6e-57
Identities = 78/183 (42%), Positives = 116/183 (63%)
Query: 263 NVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEA-LQSLATDPGLHEMLPRMC 321
N T+ VK H LS E Q++Y++IT + V SD + F+A L SL +D LH++LP
Sbjct: 238 NTSTI-VKPTVKHVLSKEIQMFYEKITNS-VKSDNQKLFDAALHSLKSDSSLHQLLPYFI 295
Query: 322 TFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGR 381
FI+ V N+ NL LL LM+M +A+L+++ L E YLH+L+PSIL+C+V K+LC
Sbjct: 296 NFISVQVTQNLT--NLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNS 353
Query: 382 PEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG- 440
P ++NHW LRDFA+RL++ V + F +++Q R+T+ L ++D + YGAI G
Sbjct: 354 P-SENHWELRDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGL 412
Query: 441 EGL 443
GL
Sbjct: 413 SGL 415
Score = 197 (74.4 bits), Expect = 5.6e-57, Sum P(3) = 5.6e-57
Identities = 40/115 (34%), Positives = 68/115 (59%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVS----QFLPFKHAS 172
V+ +++ + K M HSKR L DI++AL ++NIE +YG + S L F+ +
Sbjct: 33 VEYRIREIAQEAIKFMKHSKRDHLSTDDINNALGLRNIEQLYGYSCSANDHSLLKFQKTT 92
Query: 173 GGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD 227
+ ++F ++KE+ F+++ + PK + L HWLA+EGVQP +P+NP P +
Sbjct: 93 TTTQAIYFLNDKEMTFQEIASQPLPKVPRDPSLSAHWLALEGVQPLIPQNPSPYE 147
Score = 137 (53.3 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 45 IQPIYGLTVS----QFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHW 100
I+ +YG + S L F+ + + ++F ++KE+ F+++ + PK + L HW
Sbjct: 70 IEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMTFQEIASQPLPKVPRDPSLSAHW 129
Query: 101 LAIEGVQPTVPENPPPVD 118
LA+EGVQP +P+NP P +
Sbjct: 130 LALEGVQPLIPQNPSPYE 147
Score = 87 (35.7 bits), Expect = 5.6e-57, Sum P(3) = 5.6e-57
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
+++K+IAES GI NLPD+ A++L+ ++ Y + I Q
Sbjct: 7 DTIKIIAESAGISNLPDEIAQQLASDVEYRIREIAQ 42
>POMBASE|SPCC16C4.18c [details] [associations]
symbol:taf6 "histone H4-like TAF Taf6, SAGA complex
subunit" species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=IC] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 PomBase:SPCC16C4.18c GO:GO:0005829 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131 PIR:T41108
RefSeq:NP_587928.1 HSSP:P49847 ProteinModelPortal:O74462
STRING:O74462 EnsemblFungi:SPCC16C4.18c.1 GeneID:2539133
KEGG:spo:SPCC16C4.18c HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M NextBio:20800305 Uniprot:O74462
Length = 452
Score = 511 (184.9 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 124/314 (39%), Positives = 170/314 (54%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRE-LHFTDEKEVD 187
K M HSKR L DI AL N+EP+YG S+ L F A+ G G+ L++ D++EVD
Sbjct: 48 KFMVHSKRTVLTSADISSALRTLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVD 107
Query: 188 FEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDK 247
FE ++ PK HWLAIEGVQP +P+NP P D + + S +
Sbjct: 108 FEKIINAPLPKVPRNISYSAHWLAIEGVQPAIPQNPTPSDHTVGEWASKGTSGVM--PGA 165
Query: 248 DTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGR-RFEALQS 306
T+ K + + NVE +K L H LS E QLY++ IT A + R AL S
Sbjct: 166 STAAKEARNGVTSMDNVE---IKPLVRHVLSKELQLYFERITSALLDETNVELRDAALSS 222
Query: 307 LATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELL 366
L DPGLH++LP F+++ V N+ NL +L LM M ALLDN +L++E Y+ +L+
Sbjct: 223 LRDDPGLHQLLPYFIMFLSDSVTRNL--GNLVVLTTLMHMAWALLDNPNLFVEPYVQQLM 280
Query: 367 PSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAIND 426
PSIL+C+V+K+L P H+ALRD A+ LL V F ++ RVTR A D
Sbjct: 281 PSILTCLVAKRLGSDPNNHEHYALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLD 340
Query: 427 PKINFPSLYGAIAG 440
+ + YGAI G
Sbjct: 341 NTKPYSTHYGAIKG 354
Score = 167 (63.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 45 IQPIYGLTVSQFLPFKHAS-GGGRE-LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLA 102
++P+YG S+ L F A+ G G+ L++ D++EVDFE ++ PK HWLA
Sbjct: 72 VEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAHWLA 131
Query: 103 IEGVQPTVPENPPPVD 118
IEGVQP +P+NP P D
Sbjct: 132 IEGVQPAIPQNPTPSD 147
Score = 73 (30.8 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 6 TSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
T ++IES+K +AE +GI NL D+ A ++ ++ Y ++Q
Sbjct: 4 TVWNIESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQ 44
>ASPGD|ASPL0000017134 [details] [associations]
symbol:AN8232 species:162425 "Emericella nidulans"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 EMBL:BN001302 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0003743 GO:GO:0051090 EMBL:AACD01000144
eggNOG:COG5095 KO:K03131 HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M RefSeq:XP_681501.1 ProteinModelPortal:Q5ATZ8
STRING:Q5ATZ8 EnsemblFungi:CADANIAT00004284 GeneID:2869223
KEGG:ani:AN8232.2 Uniprot:Q5ATZ8
Length = 445
Score = 474 (171.9 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 115/322 (35%), Positives = 178/322 (55%)
Query: 121 AQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHAS-GGGRELH 179
AQ LE + K M HS+R L DI AL + ++EP+YG ++ L F AS G G+ L
Sbjct: 38 AQVLEE-ALKFMRHSRRTLLTTQDIALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLF 96
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPI 239
+ +++EVDFE L+ P+ E HWLA+EGVQP++P+NP D +++ +
Sbjct: 97 YVEDEEVDFEKLINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADS-----RNLELM 151
Query: 240 SKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEG 298
SK G +A L + V VK L H LS E QLY++++ A + S E
Sbjct: 152 SK---------GPNANATLAAMSGNGNVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEK 202
Query: 299 RRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYL 358
R SL DPGLH+++P FI+E KV ++ +L +M M +AL+ N+SLY+
Sbjct: 203 YRTSGYASLREDPGLHQLVPYFVQFISE--KVTHGLKDIFVLTQVMHMAEALVQNKSLYV 260
Query: 359 EKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
+ Y+ L+P IL+C++ +QL G + +ALRD A+ LL ++ ++ S++ ++ R+ R
Sbjct: 261 DPYIASLVPPILTCLIGRQLGGTADLSEQFALRDLAAALLGLIATKYSHSSHTLKPRLAR 320
Query: 419 LLSNAINDPKINFPSLYGAIAG 440
+ DP F + YGAI G
Sbjct: 321 SCLKTLLDPSKPFGAHYGAIIG 342
Score = 172 (65.6 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 34 SDNITYCCKVI-IQPIYGLTVSQFLPFKHAS-GGGRELHFTDEKEVDFEDLLTNLNPKSA 91
+ +I +V+ ++P+YG ++ L F AS G G+ L + +++EVDFE L+ P+
Sbjct: 58 TQDIALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVP 117
Query: 92 LETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIS 128
E HWLA+EGVQP++P+NP D ++ LE +S
Sbjct: 118 REISFTAHWLAVEGVQPSIPQNPTAAD--SRNLELMS 152
Score = 59 (25.8 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
++++ +AES+GI NL +D + L+ ++ Y
Sbjct: 7 DNIRDVAESVGIVNLNNDVTENLARDVEY 35
>UNIPROTKB|C9JTY6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004823
InterPro:IPR009072 Pfam:PF02969 SMART:SM00803 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000253001
IPI:IPI01011696 ProteinModelPortal:C9JTY6 SMR:C9JTY6 STRING:C9JTY6
Ensembl:ENST00000493322 ArrayExpress:C9JTY6 Bgee:C9JTY6
Uniprot:C9JTY6
Length = 255
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 104/215 (48%), Positives = 139/215 (64%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP K QK E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE 160
Query: 235 SIDPI--SKLGKK-DKDTSGK---PTSA-------KLEKLRNVETVHVKQLATHELSVEQ 281
+ +P+ +K G++ D GK T+A K L + +K + HELSVEQ
Sbjct: 161 ATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 220
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEM 316
QLYYKEITEACVGS E +R EALQS+ATDPGL++M
Sbjct: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQM 255
Score = 257 (95.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLES 126
L+ L+ HWL+IEG QP +PENPPP K QK E+
Sbjct: 125 VPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEA 161
>FB|FBgn0014342 [details] [associations]
symbol:mia "meiosis I arrest" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0007286 "spermatid development"
evidence=TAS] [GO:0007126 "meiosis" evidence=TAS] [GO:0005669
"transcription factor TFIID complex" evidence=ISS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] InterPro:IPR011442 Pfam:PF07571 GO:GO:0005730
GO:GO:0007286 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0051090 GO:GO:0007141 GO:GO:0005669 EMBL:AY752878
ProteinModelPortal:Q5UEC4 SMR:Q5UEC4 STRING:Q5UEC4 PRIDE:Q5UEC4
FlyBase:FBgn0014342 InParanoid:Q5UEC4 OrthoDB:EOG41G1KF
ArrayExpress:Q5UEC4 Bgee:Q5UEC4 Uniprot:Q5UEC4
Length = 593
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 90/221 (40%), Positives = 141/221 (63%)
Query: 223 PPPVDKSAQKLESI-DPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQ 281
P V +S Q ES+ +P+ +TS +P L+ VE V +K + LS+EQ
Sbjct: 141 PESVQESVQ--ESVPEPVP-------ETSLEPPPMHTGWLK-VEQVLLKPSKRYPLSMEQ 190
Query: 282 QLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLI 341
Q +++ +TEACVG E RR AL++++TDP L E+LPR+ FIA+ V +NV Q NL LL+
Sbjct: 191 QNFFELVTEACVGDLESRRVLALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLL 250
Query: 342 YLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQV 401
YLMRMV+ALL NQ L +YLH LLP++LSC+++KQ+C P +++HWALR+++ ++ +
Sbjct: 251 YLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHI 310
Query: 402 SKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEG 442
+ F+ + N I RV + + A+ + +++GA+ G G
Sbjct: 311 VRQFDAADNGILPRVIGVYNKALLKKPLT--TVFGAVIGLG 349
>UNIPROTKB|C9JFL8 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0005737 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000159894
IPI:IPI00926118 ProteinModelPortal:C9JFL8 SMR:C9JFL8 STRING:C9JFL8
Ensembl:ENST00000440225 ArrayExpress:C9JFL8 Bgee:C9JFL8
Uniprot:C9JFL8
Length = 233
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 87/199 (43%), Positives = 114/199 (57%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLE 234
GREL+F +EKEVD D++ P+ L+ L+ A + Q P K Q E
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLK----APKEQQKAEATEPLKSAKPGQ--E 154
Query: 235 SIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG 294
P+ G+ GK K L + +K + HELSVEQQLYYKEITEACVG
Sbjct: 155 EDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG 214
Query: 295 SDEGRRFEALQSLATDPGL 313
S E +R EALQS+ATDPGL
Sbjct: 215 SCEAKRAEALQSIATDPGL 233
Score = 153 (58.9 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRT--HWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDD 147
L+ L+ E +P P + K + + K P ++
Sbjct: 125 VPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEG 184
Query: 148 A-LNMKNIEPIYGLTVSQFLPFK 169
A L +K I+ L+V Q L +K
Sbjct: 185 APLRLKP-RSIHELSVEQQLYYK 206
>CGD|CAL0005584 [details] [associations]
symbol:TAF60 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
CGD:CAL0005584 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095
KO:K03131 HOGENOM:HOG000159894 RefSeq:XP_716115.1
ProteinModelPortal:Q5A2V7 STRING:Q5A2V7 GeneID:3642252
KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 251 (93.4 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 61/207 (29%), Positives = 115/207 (55%)
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD---EGRRFEALQ 305
+S ++ K + + +K L H LS E +LY+ ++ + + +D E + AL
Sbjct: 201 SSSHTNNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALT 260
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
SL +DPGLH+++P FIAE + N ++N + +L ++ ++ AL+DN++++L+ Y+H L
Sbjct: 261 SLKSDPGLHQLVPYFIQFIAEQI-TNQLRN-IEILSTMLEVISALVDNKTIFLDPYVHAL 318
Query: 366 LPSILSCIVSKQLCG----RPEADNHW--------ALRDFASRLLTQVSKNFNTSTNNIQ 413
+P IL+ +++K++ E W A+R+FA+ LL + K + +S + ++
Sbjct: 319 MPCILTLLLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLR 378
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+TR L A+ D + YGA+ G
Sbjct: 379 PRITRTLLRALLDSTKPVGTQYGALLG 405
Score = 237 (88.5 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 66/209 (31%), Positives = 107/209 (51%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--SGG 174
V+ ++ + K M HSKR +L D+ +AL + NIEP+YG +Q L +K G
Sbjct: 41 VEYHIHEIIETAVKFMRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD-KSAQKL 233
G+ L++ DE E++FE L+ PK + + HWLAIEGVQP VP+NP P + KS
Sbjct: 101 GQTLYYIDEHEIEFEKLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPAA 160
Query: 234 -----ESI--DPISKLGKKDKD-TSGKPTSAKLEKLRNV-ETVHVKQLATHELSVEQQLY 284
S+ + I LG K+++ S T + E L N + H +++ S E+ +
Sbjct: 161 VRGATTSMLGNDILSLGSKNENGESNDSTKHESELLSNGGSSSHTNNSNSNKKSTEKDME 220
Query: 285 YKEITEACVGSDEGRRFEALQS--LATDP 311
K + + + + F+ + ++TDP
Sbjct: 221 IKPLIKHVLSKELKLYFDKVVDVLISTDP 249
Score = 175 (66.7 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 34 SDNITYCCKVI-IQPIYGLTVSQFLPFKHA--SGGGRELHFTDEKEVDFEDLLTNLNPKS 90
+ +++ K++ I+P+YG +Q L +K GG+ L++ DE E++FE L+ PK
Sbjct: 66 TSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKV 125
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPP 116
+ + HWLAIEGVQP VP+NP P
Sbjct: 126 PRQVNFTAHWLAIEGVQPMVPQNPLP 151
Score = 39 (18.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSN 422
+L+ SKN N +N+ + LLSN
Sbjct: 173 ILSLGSKNENGESNDSTKHESELLSN 198
>UNIPROTKB|Q5A2V7 [details] [associations]
symbol:TAF6 "Putative uncharacterized protein TAF6"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 CGD:CAL0005584
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095 KO:K03131
HOGENOM:HOG000159894 RefSeq:XP_716115.1 ProteinModelPortal:Q5A2V7
STRING:Q5A2V7 GeneID:3642252 KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 251 (93.4 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 61/207 (29%), Positives = 115/207 (55%)
Query: 249 TSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSD---EGRRFEALQ 305
+S ++ K + + +K L H LS E +LY+ ++ + + +D E + AL
Sbjct: 201 SSSHTNNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALT 260
Query: 306 SLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHEL 365
SL +DPGLH+++P FIAE + N ++N + +L ++ ++ AL+DN++++L+ Y+H L
Sbjct: 261 SLKSDPGLHQLVPYFIQFIAEQI-TNQLRN-IEILSTMLEVISALVDNKTIFLDPYVHAL 318
Query: 366 LPSILSCIVSKQLCG----RPEADNHW--------ALRDFASRLLTQVSKNFNTSTNNIQ 413
+P IL+ +++K++ E W A+R+FA+ LL + K + +S + ++
Sbjct: 319 MPCILTLLLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLR 378
Query: 414 TRVTRLLSNAINDPKINFPSLYGAIAG 440
R+TR L A+ D + YGA+ G
Sbjct: 379 PRITRTLLRALLDSTKPVGTQYGALLG 405
Score = 237 (88.5 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 66/209 (31%), Positives = 107/209 (51%)
Query: 117 VDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHA--SGG 174
V+ ++ + K M HSKR +L D+ +AL + NIEP+YG +Q L +K G
Sbjct: 41 VEYHIHEIIETAVKFMRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVD-KSAQKL 233
G+ L++ DE E++FE L+ PK + + HWLAIEGVQP VP+NP P + KS
Sbjct: 101 GQTLYYIDEHEIEFEKLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPAA 160
Query: 234 -----ESI--DPISKLGKKDKD-TSGKPTSAKLEKLRNV-ETVHVKQLATHELSVEQQLY 284
S+ + I LG K+++ S T + E L N + H +++ S E+ +
Sbjct: 161 VRGATTSMLGNDILSLGSKNENGESNDSTKHESELLSNGGSSSHTNNSNSNKKSTEKDME 220
Query: 285 YKEITEACVGSDEGRRFEALQS--LATDP 311
K + + + + F+ + ++TDP
Sbjct: 221 IKPLIKHVLSKELKLYFDKVVDVLISTDP 249
Score = 175 (66.7 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 34 SDNITYCCKVI-IQPIYGLTVSQFLPFKHA--SGGGRELHFTDEKEVDFEDLLTNLNPKS 90
+ +++ K++ I+P+YG +Q L +K GG+ L++ DE E++FE L+ PK
Sbjct: 66 TSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKV 125
Query: 91 ALETHLRTHWLAIEGVQPTVPENPPP 116
+ + HWLAIEGVQP VP+NP P
Sbjct: 126 PRQVNFTAHWLAIEGVQPMVPQNPLP 151
Score = 39 (18.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 397 LLTQVSKNFNTSTNNIQTRVTRLLSN 422
+L+ SKN N +N+ + LLSN
Sbjct: 173 ILSLGSKNENGESNDSTKHESELLSN 198
>SGD|S000003080 [details] [associations]
symbol:TAF6 "Subunit (60 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0046695
"SLIK (SAGA-like) complex" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0001075 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IC]
[GO:0000124 "SAGA complex" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0016568
"chromatin modification" evidence=IDA] [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IDA;IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0032947 "protein complex scaffold" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
SGD:S000003080 EMBL:BK006941 GO:GO:0016573 GO:GO:0003682
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0046695
GO:GO:0032947 GO:GO:0051090 GO:GO:0001102 EMBL:X97644 GO:GO:0005669
GO:GO:0051123 EMBL:Z72634 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 HOGENOM:HOG000159894 OrthoDB:EOG45XC4M
EMBL:L40145 EMBL:AY723809 PIR:S64120 RefSeq:NP_011403.1
ProteinModelPortal:P53040 SMR:P53040 DIP:DIP-981N IntAct:P53040
MINT:MINT-405577 STRING:P53040 PaxDb:P53040 PeptideAtlas:P53040
EnsemblFungi:YGL112C GeneID:852766 KEGG:sce:YGL112C CYGD:YGL112c
OMA:LEMIYSL NextBio:972224 Genevestigator:P53040 GermOnline:YGL112C
Uniprot:P53040
Length = 516
Score = 274 (101.5 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 72/210 (34%), Positives = 113/210 (53%)
Query: 255 SAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG---SDEGRRF---EALQSLA 308
S L ++ + VK L H LS E Q+Y+ ++ +DE + AL SL
Sbjct: 197 SQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLR 256
Query: 309 TDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPS 368
TD GLH+++P FIAE + N+ ++L LL ++ M+ +LL N S++L+ Y+H L+PS
Sbjct: 257 TDSGLHQLVPYFIQFIAEQITQNL--SDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPS 314
Query: 369 ILSCIVSKQLCGRPEADN----HW------ALRDFASRLLTQVSKNFNTSTNNIQTRVTR 418
IL+ +++K+L G P+ D+ H ALRDFA+ LL V K F + +++ RVTR
Sbjct: 315 ILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTR 374
Query: 419 LLSNAINDPKINFPSLYGAIAGEGLVTERS 448
L D F + YG + G ++ S
Sbjct: 375 TLLKTFLDINRVFGTYYGCLKGVSVLEGES 404
Score = 201 (75.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 65/232 (28%), Positives = 105/232 (45%)
Query: 125 ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGL----TVSQFLPF-KHASGGGRELH 179
+++ FK HSKR L D+ AL + N+EP+YG V++ + F K + GG+ ++
Sbjct: 51 QAVKFK--RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVY 108
Query: 180 FTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENP---------PPVDKSA 230
+ DE+EVDF+ L+ P+ THWLA+EGVQP + +NP PP + A
Sbjct: 109 YLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGA 168
Query: 231 QKLESIDPISKLGKKDKDTSGKPT-SAKLEKLRNV---ETVHVKQLATHELSVEQQLYYK 286
D + S T + + L NV + VK L H LS E Q+Y+
Sbjct: 169 IVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFN 228
Query: 287 EITEACVG---SDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQN 335
++ +DE + Q+ T L ++ + + + + QN
Sbjct: 229 KVISTLTAKSQADEAAQ-HMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQN 279
Score = 144 (55.7 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 34 SDNITYCCKVI-IQPIYGL----TVSQFLPF-KHASGGGRELHFTDEKEVDFEDLLTNLN 87
+D+++ +V+ ++P+YG V++ + F K + GG+ +++ DE+EVDF+ L+
Sbjct: 66 TDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPL 125
Query: 88 PKSALETHLRTHWLAIEGVQPTVPENP 114
P+ THWLA+EGVQP + +NP
Sbjct: 126 PQVPRLPTFTTHWLAVEGVQPAIIQNP 152
Score = 66 (28.3 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQ 46
+++K +AES+G+ N+ DD K L+ ++ Y II+
Sbjct: 15 DTVKDVAESLGLENINDDVLKALAMDVEYRILEIIE 50
>WB|WBGene00006387 [details] [associations]
symbol:taf-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 GO:GO:0051090
eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486 EMBL:FO081732
RefSeq:NP_493919.1 ProteinModelPortal:Q9GZI6 SMR:Q9GZI6
IntAct:Q9GZI6 STRING:Q9GZI6 PaxDb:Q9GZI6 EnsemblMetazoa:W09B6.2
GeneID:173498 KEGG:cel:CELE_W09B6.2 UCSC:W09B6.2 CTD:173498
WormBase:W09B6.2 InParanoid:Q9GZI6 OMA:IIYAGRV NextBio:879913
Uniprot:Q9GZI6
Length = 470
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 102/338 (30%), Positives = 173/338 (51%)
Query: 122 QKLESISFKCMSHSKRVKLLPVDIDDA---------LNMKNIEPIYGLTVSQFLPFKHAS 172
+++ +S K S R ++ D++ A LN+ +++ + L + Q P + S
Sbjct: 57 KEIVRLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTL-NLGIQQLQPIQGTS 115
Query: 173 GGGRE-LHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKS-A 230
G L + + +VD ED T + K + + ++ L EG QP E VD+
Sbjct: 116 TGIYSFLKSSADVDVDKEDTETFI--KIPRDLRVISYPLVNEG-QPVQSEYTVNVDEDDG 172
Query: 231 QKLESIDPISKLGKKDKDTSGKPTSAKLEKLRN-VETVHVKQL-----ATHE-LSVEQQL 283
E I P +K+T T++ L+ R+ V+T + Q +T E L+VEQQ+
Sbjct: 173 NFFEKIVPEVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQI 232
Query: 284 YYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYL 343
+ K+I C+G D+ +R EAL +L TD GL LP + I + + N+ Q L+L+IY
Sbjct: 233 FMKDIITVCMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYA 292
Query: 344 MRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSK 403
R++++L N++ + LH +LP++LSC V + +C RPE DNHWALRDF+++ L + +
Sbjct: 293 GRVLRSLSHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVR 352
Query: 404 NFNTSTNNIQTRVTRLL--SNAI-NDPKINFPSLYGAI 438
+ ++ RL S+ I D +F +YG +
Sbjct: 353 D-QVDKHDAGRTARRLFDFSHRIFRDTGSSFSMIYGTV 389
>UNIPROTKB|E5RHA1 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00975576
ProteinModelPortal:E5RHA1 SMR:E5RHA1 Ensembl:ENST00000523306
ArrayExpress:E5RHA1 Bgee:E5RHA1 Uniprot:E5RHA1
Length = 141
Score = 290 (107.1 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 54/109 (49%), Positives = 74/109 (67%)
Query: 118 DKSAQKL-ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGR 176
+++ Q L + + K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGR
Sbjct: 33 EETCQLLTDEDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGR 92
Query: 177 ELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPP 225
EL+F +EKEVD D++ P+ L+ L+ HWL+IEG QP +PENPPP
Sbjct: 93 ELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPP 141
Score = 239 (89.2 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 42/87 (48%), Positives = 60/87 (68%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 55 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 114
Query: 90 SALETHLRTHWLAIEGVQPTVPENPPP 116
L+ L+ HWL+IEG QP +PENPPP
Sbjct: 115 VPLDVCLKAHWLSIEGCQPAIPENPPP 141
Score = 64 (27.6 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSD 35
+ + T ESMKV+AES+GI + ++ + L+D
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD 41
>ZFIN|ZDB-GENE-030131-6789 [details] [associations]
symbol:taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-030131-6789 GO:GO:0005634 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 KO:K03131
OMA:MPQLTAN GeneTree:ENSGT00640000091486 EMBL:AL954709
IPI:IPI00901427 RefSeq:NP_001186651.1 UniGene:Dr.75265
Ensembl:ENSDART00000113120 GeneID:557363 KEGG:dre:557363
NextBio:20881960 Bgee:E7FEV1 Uniprot:E7FEV1
Length = 641
Score = 206 (77.6 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 53/178 (29%), Positives = 87/178 (48%)
Query: 263 NVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCT 322
N+E A LS + YY++IT A +G D AL L ++ + +LP
Sbjct: 139 NLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVALLDLQSNSKIAALLPYF-V 197
Query: 323 FIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRP 382
++ GVK V ++L L L+ MVK+L+ N LYL Y+ L+ S++ CI+
Sbjct: 198 YVISGVKS--VSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASIN 255
Query: 383 EADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
++HW LRD+A+ LL+ + + + ++ L ++DP S YGA+ G
Sbjct: 256 PLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVG 313
Score = 118 (46.6 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 31/99 (31%), Positives = 47/99 (47%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL N E + G LPF+ G EL + +++E++
Sbjct: 51 SSQFMRHAKRRKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEG--ELFYVEDREIN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETMVRVHVSYLDGKGNLEPQGTVP 147
Score = 74 (31.1 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 46 QPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAIE 104
+ + G LPF+ G EL + +++E++ +L N PK ET +R H ++
Sbjct: 78 ETVCGYGAQDALPFRPLKEG--ELFYVEDREINLVELALATNIPKGCAETMVRVHVSYLD 135
Query: 105 GVQPTVPENPPP 116
G P+ P
Sbjct: 136 GKGNLEPQGTVP 147
Score = 51 (23.0 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES+K++AES G+ L ++ A L++++ Y
Sbjct: 15 ESVKLMAESAGV-ELSEELAGLLAEDVCY 42
>UNIPROTKB|F1MDZ8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:DAAA02063486 IPI:IPI00706361
Ensembl:ENSBTAT00000012482 ArrayExpress:F1MDZ8 Uniprot:F1MDZ8
Length = 665
Score = 184 (69.8 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV 332
A L+ + YY+++T A +G D AL L T+ + +LP ++ GVK
Sbjct: 195 AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALHDLQTNSKIAALLPYF-VYVVSGVKS-- 251
Query: 333 VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
V ++L L L+++ ++L+ N L L Y+ L+ S+L C++ ++HW LRD
Sbjct: 252 VSHDLEQLHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRD 311
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+ LL+ + + N + ++ L + DP S YGA+ G
Sbjct: 312 GAALLLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVG 359
Score = 129 (50.5 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 97 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVN 154
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
+L N PK ET LR H ++G P+ P
Sbjct: 155 LVELALATNIPKGCAETALRVHVSYLDGKGNLAPQGSVP 193
Score = 87 (35.7 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAI 103
++ + G + LP + A G EL+F +++EV+ +L N PK ET LR H +
Sbjct: 123 VEAVCGYGSQEVLPLRPAREG--ELYFPEDREVNLVELALATNIPKGCAETALRVHVSYL 180
Query: 104 EGVQPTVPENPPP 116
+G P+ P
Sbjct: 181 DGKGNLAPQGSVP 193
Score = 53 (23.7 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 61 ESVRLMAESTGL-ELSDEVAALLAEDVCY 88
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 220 PENPPPVDKSAQKLESIDPISKLGKK 245
P P P + QKL I S+ ++
Sbjct: 628 PYGPSPASRYVQKLPMIGRTSRPARR 653
>UNIPROTKB|I3LPI1 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:FP312617
Ensembl:ENSSSCT00000022269 Uniprot:I3LPI1
Length = 624
Score = 180 (68.4 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV 332
A L+ + YY+++T A +G D ALQ L T+ + +LP ++ GVK
Sbjct: 156 AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQDLQTNSKIAALLPYF-VYVVSGVKS-- 212
Query: 333 VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
V ++L L L+++ ++L+ N L L Y+ L+ S+L C++ ++HW LRD
Sbjct: 213 VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRD 272
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+ LL+ + + + ++ L + DP S YGA+ G
Sbjct: 273 GAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVG 320
Score = 129 (50.5 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
DL N PK ET +R H ++G P+ P
Sbjct: 116 LVDLALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 154
Score = 87 (35.7 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAI 103
++ + G + LP + A G EL+F +++EV+ DL N PK ET +R H +
Sbjct: 84 VEAVCGYGSQEALPLRPAREG--ELYFPEDREVNLVDLALATNIPKGCAETAVRVHVSYL 141
Query: 104 EGVQPTVPENPPP 116
+G P+ P
Sbjct: 142 DGKGNLAPQGSVP 154
Score = 53 (23.7 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 22 ESVRLMAESTGL-ELSDEVAALLAEDVCY 49
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 220 PENPPPVDKSAQKLESIDPISKLGKK 245
P P P + QKL I S+ ++
Sbjct: 587 PYGPSPASRYVQKLPMIGRTSRPARR 612
>UNIPROTKB|E2QUN8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 CTD:10629
KO:K03131 OMA:MPQLTAN GeneTree:ENSGT00640000091486
EMBL:AAEX03011662 RefSeq:XP_533259.2 Ensembl:ENSCAFT00000024787
GeneID:476051 KEGG:cfa:476051 Uniprot:E2QUN8
Length = 625
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV 332
A L+ + YY+++T A +G D ALQ L T+ + +LP ++ GVK
Sbjct: 156 AVSSLTDDLLKYYQQVTRAVLGDDPQLMKIALQDLQTNSKIAALLPYF-VYVVSGVKS-- 212
Query: 333 VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
V ++L L L+++ ++L+ N L L Y+ L+ S+L C++ ++HW LRD
Sbjct: 213 VSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRD 272
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+ LL+ + + + ++ L + DP S YGA+ G
Sbjct: 273 GAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVG 320
Score = 126 (49.4 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 58 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVN 115
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
+L N PK ET +R H ++G P+ P
Sbjct: 116 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 154
Score = 84 (34.6 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAI 103
++ + G + LP + A G EL+F +++EV+ +L N PK ET +R H +
Sbjct: 84 VEAVCGYGSQEVLPLRPAREG--ELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYL 141
Query: 104 EGVQPTVPENPPP 116
+G P+ P
Sbjct: 142 DGKGNLAPQGSVP 154
Score = 53 (23.7 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 22 ESVRLMAESTGL-ELSDEVAALLAEDVCY 49
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 219 VPENPPPVDKSAQKLESI 236
VP P P + QKL I
Sbjct: 587 VPYGPSPASRYVQKLPMI 604
>MGI|MGI:2444957 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
MGI:MGI:2444957 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 KO:K03131 OrthoDB:EOG498V0F
EMBL:AK077149 EMBL:BC028647 IPI:IPI00153596 IPI:IPI00405376
RefSeq:NP_001171269.1 RefSeq:NP_666204.2 UniGene:Mm.220886
ProteinModelPortal:Q8R2K4 SMR:Q8R2K4 IntAct:Q8R2K4 STRING:Q8R2K4
PhosphoSite:Q8R2K4 PRIDE:Q8R2K4 Ensembl:ENSMUST00000177056
GeneID:225895 KEGG:mmu:225895 UCSC:uc008gmx.2 UCSC:uc008gmy.2
GeneTree:ENSGT00640000091486 InParanoid:Q8R2K4 NextBio:377857
Bgee:Q8R2K4 Genevestigator:Q8R2K4 GermOnline:ENSMUSG00000003680
Uniprot:Q8R2K4
Length = 616
Score = 184 (69.8 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV 332
A L+ + YY+++T A +G D ALQ L T+ + +LP ++ GVK
Sbjct: 149 AVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYF-VYVVSGVKS-- 205
Query: 333 VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
V ++L L L+++ ++L+ N L L Y+ L+ S+L C++ ++HW LRD
Sbjct: 206 VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRD 265
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+ LL+ + + + ++ L + DP S YGA+ G
Sbjct: 266 GAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVG 313
Score = 121 (47.7 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G +L+F +++EV
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREG--DLYFPEDREVS 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 147
Score = 79 (32.9 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAI 103
++ + G + LP + A G +L+F +++EV +L N PK ET +R H +
Sbjct: 77 VEAVCGYGSQEALPLRPAREG--DLYFPEDREVSLVELALATNIPKGCAETAVRVHVSYL 134
Query: 104 EGVQPTVPENPPP 116
+G P+ P
Sbjct: 135 DGKGNLAPQGSVP 147
Score = 53 (23.7 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 15 ESVRLMAESTGL-ELSDEVAALLAEDVCY 42
>UNIPROTKB|E5RKA5 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00983929
ProteinModelPortal:E5RKA5 SMR:E5RKA5 Ensembl:ENST00000520135
ArrayExpress:E5RKA5 Bgee:E5RKA5 Uniprot:E5RKA5
Length = 114
Score = 192 (72.6 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 118 DKSAQKL-ESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGR 176
+++ Q L + + K M KR KL DID AL +KN+EP+YG +F+PF+ ASGGGR
Sbjct: 33 EETCQLLTDEDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGR 92
Query: 177 ELHFTDEKEVDFEDLLTNLNPK 198
EL+F +EKEVD D++ P+
Sbjct: 93 ELYFYEEKEVDLSDIINTPLPR 114
Score = 141 (54.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 55 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 114
Score = 64 (27.6 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 1 MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSD 35
+ + T ESMKV+AES+GI + ++ + L+D
Sbjct: 7 LKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTD 41
>UNIPROTKB|Q9Y6J9 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0003677 EMBL:CH471076
GO:GO:0006352 GO:GO:0006357 GO:GO:0006338 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0043966
GO:GO:0000118 GO:GO:0030914 EMBL:AF069735 EMBL:AK314330
IPI:IPI00007957 RefSeq:NP_006464.1 UniGene:Hs.714400
ProteinModelPortal:Q9Y6J9 SMR:Q9Y6J9 IntAct:Q9Y6J9
MINT:MINT-1456123 STRING:Q9Y6J9 PhosphoSite:Q9Y6J9 DMDM:46577572
PaxDb:Q9Y6J9 PeptideAtlas:Q9Y6J9 PRIDE:Q9Y6J9
Ensembl:ENST00000294168 GeneID:10629 KEGG:hsa:10629 UCSC:uc001nvc.3
CTD:10629 GeneCards:GC11P062538 HGNC:HGNC:17305 MIM:602946
neXtProt:NX_Q9Y6J9 PharmGKB:PA38224 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 InParanoid:Q9Y6J9 KO:K03131
OMA:MPQLTAN OrthoDB:EOG498V0F PhylomeDB:Q9Y6J9 ChiTaRS:TAF6L
GenomeRNAi:10629 NextBio:40385 ArrayExpress:Q9Y6J9 Bgee:Q9Y6J9
CleanEx:HS_TAF6L Genevestigator:Q9Y6J9 GermOnline:ENSG00000162227
Uniprot:Q9Y6J9
Length = 622
Score = 167 (63.8 bits), Expect = 7.9e-19, Sum P(3) = 7.9e-19
Identities = 46/168 (27%), Positives = 78/168 (46%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNV 332
A L+ + YY ++T A +G D ALQ L T+ + +LP ++ GVK
Sbjct: 149 AVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQDLQTNSKIGALLPYF-VYVVSGVKS-- 205
Query: 333 VQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRD 392
V ++L L L+++ ++L N L L Y+ L+ S+L C++ ++HW LRD
Sbjct: 206 VSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLNDHWTLRD 265
Query: 393 FASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
A+ LL+ + + + + L + DP YGA+ G
Sbjct: 266 GAALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVG 313
Score = 125 (49.1 bits), Expect = 7.9e-19, Sum P(3) = 7.9e-19
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 147
Score = 83 (34.3 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAI 103
++ + G + LP + A G EL+F +++EV+ +L N PK ET +R H +
Sbjct: 77 VEAVCGYGSQEALPMRPAREG--ELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYL 134
Query: 104 EGVQPTVPENPPP 116
+G P+ P
Sbjct: 135 DGKGNLAPQGSVP 147
Score = 53 (23.7 bits), Expect = 7.9e-19, Sum P(3) = 7.9e-19
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 15 ESVRLMAESTGL-ELSDEVAALLAEDVCY 42
Score = 37 (18.1 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 220 PENPPPVDKSAQKLESIDPISKLGKK 245
P P P + QKL I S+ ++
Sbjct: 585 PYGPSPASRYVQKLPMIGRTSRPARR 610
>WB|WBGene00021363 [details] [associations]
symbol:taf-6.2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR011442 Pfam:PF07571 GO:GO:0005634 GO:GO:0009792
GO:GO:0000003 GO:GO:0051090 eggNOG:COG5095
GeneTree:ENSGT00640000091486 EMBL:FO080976 RefSeq:NP_500397.1
ProteinModelPortal:Q965Y0 SMR:Q965Y0 STRING:Q965Y0 PaxDb:Q965Y0
EnsemblMetazoa:Y37E11AL.8 GeneID:177129 KEGG:cel:CELE_Y37E11AL.8
UCSC:Y37E11AL.8 CTD:177129 WormBase:Y37E11AL.8 HOGENOM:HOG000018550
InParanoid:Q965Y0 OMA:EMSRGRF NextBio:895468 Uniprot:Q965Y0
Length = 814
Score = 252 (93.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 70/254 (27%), Positives = 128/254 (50%)
Query: 130 KCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASG--GGREL---HFTDEK 184
K S R +L+P D+D A + I+ Y LT P + GR+L H+T +
Sbjct: 135 KSASRENRKRLVPSDVDIACGIAQID--YNLTCPLLRPTPSSDRMYWGRKLTKEHYTID- 191
Query: 185 EVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGK 244
+ ++++++ + ++ HWL ++G+QP +PEN P + + E +
Sbjct: 192 -ANSKEMVSH--ERFCDSIMIKDHWLVVDGIQPCLPENVIPSEVKRRFQEQQHETQRA-- 246
Query: 245 KDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEAL 304
G P K E + K+++T S+E Q+ Y EIT+ +R + L
Sbjct: 247 ---HGFGVP-GIKREPMPE------KRMSTQTFSMEHQVLYSEITKILTSGSSLQRQKVL 296
Query: 305 QSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHE 364
+++ TD G+ + R IAEG ++++ N+ L L+++ +L+ N ++ LEKYL+
Sbjct: 297 ETIETDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSLMKNPNIRLEKYLYV 356
Query: 365 LLPSILSCIVSKQL 378
L+PS++SC+VSK +
Sbjct: 357 LVPSLISCVVSKNM 370
Score = 41 (19.5 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 10/49 (20%), Positives = 26/49 (53%)
Query: 390 LRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAI 438
LR+ + +LL ++S + N+ R+ + L ++ + + ++YG +
Sbjct: 416 LREASGKLLAELSSQYQNL--NLNVRIIQTLRGVLSGNQ-DPAAIYGVL 461
>UNIPROTKB|C9JIS2 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00946556
ProteinModelPortal:C9JIS2 SMR:C9JIS2 STRING:C9JIS2
Ensembl:ENST00000449571 ArrayExpress:C9JIS2 Bgee:C9JIS2
Uniprot:C9JIS2
Length = 134
Score = 206 (77.6 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 41/94 (43%), Positives = 60/94 (63%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLRTH 208
GREL+F +EKEVD D++ P+ L+ L+ H
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAH 134
Score = 155 (59.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLRTH 99
L+ L+ H
Sbjct: 125 VPLDVCLKAH 134
>RGD|1310123 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1310123 GO:GO:0005634
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090
IPI:IPI00390765 Ensembl:ENSRNOT00000037327 UCSC:RGD:1310123
ArrayExpress:D4ABK5 Uniprot:D4ABK5
Length = 591
Score = 133 (51.9 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 328 VKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNH 387
+KV V ++L L L+++ ++L+ N L L Y+ L+ S+L C++ ++H
Sbjct: 176 MKVKSVSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDH 235
Query: 388 WALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAG 440
W LRD A+ LL+ + + + ++ L + DP S YGA+ G
Sbjct: 236 WTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVG 288
Score = 126 (49.4 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPENPPP 225
+L N PK ET +R H ++G P+ P
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVP 147
Score = 84 (34.6 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 45 IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLN-PKSALETHLRTHWLAI 103
++ + G + LP + A G EL+F +++EV+ +L N PK ET +R H +
Sbjct: 77 VEAVCGYGSQEVLPLRPAREG--ELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYL 134
Query: 104 EGVQPTVPENPPP 116
+G P+ P
Sbjct: 135 DGKGNLAPQGSVP 147
Score = 53 (23.7 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 15 ESVRLMAESTGL-ELSDEVAALLAEDVCY 42
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 273 ATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATD-PGLHEML 317
A L+ + YY+++T A +G D + ++S++ D LH +L
Sbjct: 149 AVSSLTDDLLKYYQQVTRAVLGDDP--QLMKVKSVSHDLEQLHRLL 192
>UNIPROTKB|C9J088 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00926538
ProteinModelPortal:C9J088 SMR:C9J088 STRING:C9J088
Ensembl:ENST00000452438 ArrayExpress:C9J088 Bgee:C9J088
Uniprot:C9J088
Length = 156
Score = 198 (74.8 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 40/92 (43%), Positives = 59/92 (64%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVDFEDLLTNLNPKSALETHLR 206
GREL+F +EKEVD D++ P+ L+ L+
Sbjct: 101 GRELYFYEEKEVDLSDIINTPLPRVPLDVCLK 132
Score = 147 (56.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPK 89
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD D++ P+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 124
Query: 90 SALETHLR 97
L+ L+
Sbjct: 125 VPLDVCLK 132
>UNIPROTKB|C9J7C4 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00970799
ProteinModelPortal:C9J7C4 SMR:C9J7C4 STRING:C9J7C4
Ensembl:ENST00000451699 ArrayExpress:C9J7C4 Bgee:C9J7C4
Uniprot:C9J7C4
Length = 114
Score = 179 (68.1 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEVD 187
GREL+F +EKEVD
Sbjct: 101 GRELYFYEEKEVD 113
Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 78
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKEVD
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
>UNIPROTKB|F8WEJ7 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00925005
ProteinModelPortal:F8WEJ7 SMR:F8WEJ7 Ensembl:ENST00000421980
ArrayExpress:F8WEJ7 Bgee:F8WEJ7 Uniprot:F8WEJ7
Length = 114
Score = 170 (64.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 34/72 (47%), Positives = 49/72 (68%)
Query: 118 DKSAQKLESIS---FKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGG 174
D+ + +++ I+ K M KR KL DID AL +KN+EP+YG +F+PF+ ASGG
Sbjct: 41 DEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGG 100
Query: 175 GRELHFTDEKEV 186
GREL+F +EKE+
Sbjct: 101 GRELYFYEEKEL 112
Score = 119 (46.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 31 KELSDNITYCCKVI-IQPIYGLTVSQFLPFKHASGGGRELHFTDEKEV 77
K + +I Y K+ ++P+YG +F+PF+ ASGGGREL+F +EKE+
Sbjct: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEL 112
>UNIPROTKB|E9PP94 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 EMBL:AP001160 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 HGNC:HGNC:17305 ChiTaRS:TAF6L IPI:IPI00983560
ProteinModelPortal:E9PP94 SMR:E9PP94 Ensembl:ENST00000529509
UCSC:uc009yof.3 ArrayExpress:E9PP94 Bgee:E9PP94 Uniprot:E9PP94
Length = 145
Score = 121 (47.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 128 SFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVD 187
S + M H+KR KL D + AL ++E + G + LP + A G EL+F +++EV+
Sbjct: 51 SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAREG--ELYFPEDREVN 108
Query: 188 FEDLLTNLN-PKSALETHLRTHWLAIEGVQPTVPE 221
+L N PK ET +R H ++G P+
Sbjct: 109 LVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQ 143
Score = 53 (23.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 11 ESMKVIAESIGIPNLPDDAAKELSDNITY 39
ES++++AES G+ L D+ A L++++ Y
Sbjct: 15 ESVRLMAESTGL-ELSDEVAALLAEDVCY 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 448 448 0.00091 118 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 604 (64 KB)
Total size of DFA: 251 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.92u 0.10s 46.02t Elapsed: 00:00:03
Total cpu time: 45.93u 0.10s 46.03t Elapsed: 00:00:03
Start: Thu Aug 15 12:59:20 2013 End: Thu Aug 15 12:59:23 2013