Diaphorina citri psyllid: psy11212

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45

MDIYGTSFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKSAQKLESIDPISKLGKKDKDTSGKPTSAKLEKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTERS

cccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEcccccccHHHHHHccccccccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccccccCCcccccccEEEcccccccHHHHHHcccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccc

******SFSIESMKVIAESIGIPNLPDDAAKELSDNITYCCKVIIQPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGVQPTVPENPPPVDKS**KLESISFKCMSHSKRVKLLPVDIDDALNMKNIEPIYGLTVSQFLPFKHASGGGRELHFTDEKEVDFEDLLTNLNPKSALETHLRTHWLAIEGV**************************************************TVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRFEALQSLATDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELLPSILSCIVSKQLCGRPEADNHWALRDFASRLLTQVSKNFNTSTNNIQTRVTRLLSNAINDPKINFPSLYGAIAGEGLVTE**

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Transcription initiation factor TFIID subunit 6	TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TIIFD is multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors.	confident	Q62311
Transcription initiation factor TFIID subunit 6	TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors.	confident	P49847
Transcription initiation factor TFIID subunit 6	TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TIIFD is multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors.	confident	Q63801

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0033276 [CC]	transcription factor TFTC complex	probable	GO:0030880, GO:0044464, GO:0031974, GO:0043229, GO:0016591, GO:0043227, GO:0043226, GO:0005575, GO:0000123, GO:0005634, GO:0005654, GO:0044451, GO:0055029, GO:0043231, GO:0043234, GO:0032991, GO:0031981, GO:0043233, GO:0000428, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0070461, GO:0044428, GO:0005667, GO:0044424, GO:0044422
GO:0001075 [MF]	RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly	probable	GO:0003700, GO:0003674, GO:0000983, GO:0001071, GO:0000981
GO:0045786 [BP]	negative regulation of cell cycle	probable	GO:0051726, GO:0050794, GO:0008150, GO:0065007, GO:0048519, GO:0050789, GO:0048523
GO:0071339 [CC]	MLL1 complex	probable	GO:0031974, GO:0043229, GO:0005623, GO:0043227, GO:0043226, GO:0034708, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0035097, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422, GO:0044665
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005669 [CC]	transcription factor TFIID complex	probable	GO:0030880, GO:0000428, GO:0031974, GO:0043229, GO:0016591, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0055029, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0005667, GO:0044424, GO:0044422
GO:0003677 [MF]	DNA binding	probable	GO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0006355 [BP]	regulation of transcription, DNA-dependent	probable	GO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0006352 [BP]	DNA-dependent transcription, initiation	probable	GO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438
GO:0000124 [CC]	SAGA complex	probable	GO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043231, GO:0043234, GO:0032991, GO:0000123, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0070461, GO:0044428, GO:0044424, GO:0044422
GO:0005515 [MF]	protein binding	probable	GO:0003674, GO:0005488
GO:0008285 [BP]	negative regulation of cell proliferation	probable	GO:0042127, GO:0050794, GO:0008150, GO:0065007, GO:0048519, GO:0050789, GO:0048523
GO:0006366 [BP]	transcription from RNA polymerase II promoter	probable	GO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ATG, chain A
Confidence level:very confident
Coverage over the Query: 274-447
View the alignment between query and template
View the model in PyMOL

Template: 1TAF, chain B
Confidence level:very confident
Coverage over the Query: 3-47,128-151
View the alignment between query and template
View the model in PyMOL