Query psy11215
Match_columns 100
No_of_seqs 108 out of 131
Neff 4.6
Searched_HMMs 13730
Date Fri Aug 16 21:04:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11215.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11215hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2r7ga2 a.74.1.3 (A:644-785) R 34.4 14 0.001 24.3 2.9 44 11-54 7-52 (142)
2 d1xbba_ d.144.1.7 (A:) Tyrosin 26.7 31 0.0023 23.1 3.8 24 59-84 237-260 (277)
3 d1t4ha_ d.144.1.7 (A:) Protein 22.7 20 0.0014 24.2 2.0 25 59-85 240-264 (270)
4 d1mp8a_ d.144.1.7 (A:) Focal a 22.5 20 0.0015 23.8 2.0 26 59-86 236-261 (273)
5 d1vz0a1 a.4.14.1 (A:116-208) P 21.8 20 0.0015 21.4 1.7 23 33-55 43-68 (93)
6 d1u46a_ d.144.1.7 (A:) Activat 20.5 28 0.0021 23.3 2.5 25 60-86 243-267 (273)
7 d1fs1a1 a.158.1.1 (A:109-149) 20.5 49 0.0036 16.2 3.0 34 33-66 2-36 (41)
8 d1rjba_ d.144.1.7 (A:) Fl cyto 19.9 24 0.0018 24.2 2.0 25 59-85 294-318 (325)
9 d1mqba_ d.144.1.7 (A:) epha2 r 19.5 32 0.0023 23.0 2.6 28 59-88 240-267 (283)
10 d1byga_ d.144.1.7 (A:) Carboxy 18.9 26 0.0019 23.4 2.0 26 59-86 227-252 (262)
No 1
>d2r7ga2 a.74.1.3 (A:644-785) Retinoblastoma tumor suppressor domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.40 E-value=14 Score=24.27 Aligned_cols=44 Identities=18% Similarity=0.134 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhccC--CCCCCCCChhhHHHHHhhhhhhhhHH
Q psy11215 11 FVKRKSWKASLRKNSFIT--PPKDTNIPEDIRDEIDCVVGQTKLLT 54 (100)
Q Consensus 11 yf~~~l~~E~~RL~~lc~--~~~~~~lpeei~g~Ir~aVGqa~LL~ 54 (100)
||+|...--..||+.+|. ...+.++-+-++-.+.-++-+---||
T Consensus 7 FfrKvy~La~~Rl~~LC~~L~~~~~~l~~~Iw~~fe~~l~~~t~L~ 52 (142)
T d2r7ga2 7 FYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELM 52 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHHHHhHHHH
Confidence 666666678999999998 45556777778777766655444444
No 2
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.71 E-value=31 Score=23.10 Aligned_cols=24 Identities=13% Similarity=0.057 Sum_probs=20.3
Q ss_pred HHHHHHHHHhcCcCCCCCCCCCcchh
Q psy11215 59 QQMSNLIDQYENQSEQAQPRILENDL 84 (100)
Q Consensus 59 ~QF~gL~~~~~~~~~~~~~~~t~~DL 84 (100)
..+..|+.+|....|+. |||.+++
T Consensus 237 ~~~~~li~~cl~~dp~~--RPs~~~i 260 (277)
T d1xbba_ 237 REMYDLMNLCWTYDVEN--RPGFAAV 260 (277)
T ss_dssp HHHHHHHHHHTCSSTTT--SCCHHHH
T ss_pred HHHHHHHHHHcCCCHhH--CcCHHHH
Confidence 45778999999998888 8899886
No 3
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68 E-value=20 Score=24.23 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=21.3
Q ss_pred HHHHHHHHHhcCcCCCCCCCCCcchhH
Q psy11215 59 QQMSNLIDQYENQSEQAQPRILENDLD 85 (100)
Q Consensus 59 ~QF~gL~~~~~~~~~~~~~~~t~~DL~ 85 (100)
..++.|+.+|+.+.|+. |+|++|+-
T Consensus 240 ~~~~~li~~~l~~dp~~--R~s~~ell 264 (270)
T d1t4ha_ 240 PEVKEIIEGCIRQNKDE--RYSIKDLL 264 (270)
T ss_dssp HHHHHHHHHHSCSSGGG--SCCHHHHH
T ss_pred HHHHHHHHHHccCCHhH--CcCHHHHh
Confidence 56889999999998888 88988873
No 4
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.54 E-value=20 Score=23.80 Aligned_cols=26 Identities=12% Similarity=0.095 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcCcCCCCCCCCCcchhHH
Q psy11215 59 QQMSNLIDQYENQSEQAQPRILENDLDS 86 (100)
Q Consensus 59 ~QF~gL~~~~~~~~~~~~~~~t~~DL~G 86 (100)
..+..|+.+|....|++ |||++++..
T Consensus 236 ~~~~~li~~cl~~dp~~--Rps~~ei~~ 261 (273)
T d1mp8a_ 236 PTLYSLMTKCWAYDPSR--RPRFTELKA 261 (273)
T ss_dssp HHHHHHHHHHTCSSGGG--SCCHHHHHH
T ss_pred HHHHHHHHHHcCCCHhH--CcCHHHHHH
Confidence 45788999999998888 889998754
No 5
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=21.76 E-value=20 Score=21.36 Aligned_cols=23 Identities=13% Similarity=0.335 Sum_probs=20.0
Q ss_pred CCCChhhHHHHHhh---hhhhhhHHH
Q psy11215 33 TNIPEDIRDEIDCV---VGQTKLLTS 55 (100)
Q Consensus 33 ~~lpeei~g~Ir~a---VGqa~LL~~ 55 (100)
.++|+++++.|+.. +|+|+.|+.
T Consensus 43 l~L~~~v~~~l~~g~Is~ghAr~L~~ 68 (93)
T d1vz0a1 43 LQLPPEALEALERGEITAGHARALLM 68 (93)
T ss_dssp GGSCHHHHHHHHTTSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHC
Confidence 47999999999986 899999874
No 6
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.53 E-value=28 Score=23.30 Aligned_cols=25 Identities=16% Similarity=0.070 Sum_probs=21.1
Q ss_pred HHHHHHHHhcCcCCCCCCCCCcchhHH
Q psy11215 60 QMSNLIDQYENQSEQAQPRILENDLDS 86 (100)
Q Consensus 60 QF~gL~~~~~~~~~~~~~~~t~~DL~G 86 (100)
.+..|+.+|..+.|++ |||.+++.-
T Consensus 243 ~l~~li~~cl~~dp~~--RPt~~ei~~ 267 (273)
T d1u46a_ 243 DIYNVMVQCWAHKPED--RPTFVALRD 267 (273)
T ss_dssp HHHHHHHHHTCSSGGG--SCCHHHHHH
T ss_pred HHHHHHHHHcCCChhH--CcCHHHHHH
Confidence 4678999999998888 889988863
No 7
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.47 E-value=49 Score=16.24 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=22.2
Q ss_pred CCCChhhHHHHHhhhhhhhhHHHHhH-HHHHHHHH
Q psy11215 33 TNIPEDIRDEIDCVVGQTKLLTSDKF-QQMSNLID 66 (100)
Q Consensus 33 ~~lpeei~g~Ir~aVGqa~LL~~~Kf-~QF~gL~~ 66 (100)
+.+|+|+.-.|-+-..-.-|+-.... +.|+.++.
T Consensus 2 ~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~~ 36 (41)
T d1fs1a1 2 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLAS 36 (41)
T ss_dssp CSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHT
T ss_pred CcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 36899999999887765555543333 55666554
No 8
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.88 E-value=24 Score=24.21 Aligned_cols=25 Identities=8% Similarity=0.044 Sum_probs=21.5
Q ss_pred HHHHHHHHHhcCcCCCCCCCCCcchhH
Q psy11215 59 QQMSNLIDQYENQSEQAQPRILENDLD 85 (100)
Q Consensus 59 ~QF~gL~~~~~~~~~~~~~~~t~~DL~ 85 (100)
..+..|+..|....|++ |||.++|.
T Consensus 294 ~~l~~li~~cl~~dP~~--RPt~~ei~ 318 (325)
T d1rjba_ 294 EEIYIIMQSCWAFDSRK--RPSFPNLT 318 (325)
T ss_dssp HHHHHHHHHHTCSSGGG--SCCHHHHH
T ss_pred HHHHHHHHHHcCCChhH--CcCHHHHH
Confidence 45788999999998888 89999885
No 9
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.52 E-value=32 Score=22.98 Aligned_cols=28 Identities=21% Similarity=0.107 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCcCCCCCCCCCcchhHHHH
Q psy11215 59 QQMSNLIDQYENQSEQAQPRILENDLDSFW 88 (100)
Q Consensus 59 ~QF~gL~~~~~~~~~~~~~~~t~~DL~GFW 88 (100)
..+..|+..|..+.|++ |||.+++--.-
T Consensus 240 ~~l~~li~~cl~~~p~~--RPt~~eil~~L 267 (283)
T d1mqba_ 240 SAIYQLMMQCWQQERAR--RPKFADIVSIL 267 (283)
T ss_dssp HHHHHHHHHHTCSSTTT--SCCHHHHHHHH
T ss_pred HHHHHHHHHHCcCCHhH--CcCHHHHHHHH
Confidence 45788999999998888 88999986543
No 10
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.93 E-value=26 Score=23.43 Aligned_cols=26 Identities=8% Similarity=-0.023 Sum_probs=22.0
Q ss_pred HHHHHHHHHhcCcCCCCCCCCCcchhHH
Q psy11215 59 QQMSNLIDQYENQSEQAQPRILENDLDS 86 (100)
Q Consensus 59 ~QF~gL~~~~~~~~~~~~~~~t~~DL~G 86 (100)
..+..|+.+|....|.+ |||+.|+.-
T Consensus 227 ~~~~~li~~cl~~dP~~--Rps~~~l~~ 252 (262)
T d1byga_ 227 PAVYEVMKNCWHLDAAM--RPSFLQLRE 252 (262)
T ss_dssp HHHHHHHHHHTCSSGGG--SCCHHHHHH
T ss_pred HHHHHHHHHHcccCHhH--CcCHHHHHH
Confidence 56788999999998888 899998854
Done!