BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1122
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03611|CNG_CAEEL Cyclic nucleotide-gated cation channel OS=Caenorhabditis elegans
GN=tax-4 PE=2 SV=3
Length = 733
Score = 129 bits (324), Expect = 6e-30, Method: Composition-based stats.
Identities = 60/133 (45%), Positives = 97/133 (72%), Gaps = 5/133 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG-RVLT 67
V IFQ+C+ L +LVLK++ +F+PGD IC+KG++ REM+I+ G L+V+ + G +V
Sbjct: 491 VRIFQDCEAGLLAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQVVDDDGKKVFV 550
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
T++ G FGE+ ILN+ G N+RTA+VRSVGY +LF LS+ D+ +A+++YP+A+++L
Sbjct: 551 TLQEGSVFGELSILNIAGSKNGNRRTANVRSVGYTDLFVLSKTDLWNALREYPDARKLLL 610
Query: 125 NLGRKRLMEAKNL 137
GR+ +++ NL
Sbjct: 611 AKGRE-ILKKDNL 622
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK+K +F+PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 522 VRIFQDCEAGLLIELVLKLKPTVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFV 581
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YPEA++ L+
Sbjct: 582 VLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALE 641
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 642 EKGRQILMK 650
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD IC+KG++ REM+II +G L V++E G
Sbjct: 499 VRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGITQFV 558
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YPEA++ L+
Sbjct: 559 VLGDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALE 618
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 619 EKGRQILMK 627
>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens
GN=CNGA3 PE=1 SV=2
Length = 694
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD IC+KG++ +EM+II +G L V+++ G
Sbjct: 480 VRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFV 539
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YPEA++ L+
Sbjct: 540 VLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALE 599
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 600 EKGRQILMK 608
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 421 VRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFV 480
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+ L+
Sbjct: 481 VLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKRALE 540
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 541 EKGRQILMK 549
>sp|Q62398|CNGA2_MOUSE Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2
PE=2 SV=2
Length = 664
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 95/129 (73%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD ICRKG++ +EM+II +G L V+++ G
Sbjct: 454 VRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYA 513
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+++L+
Sbjct: 514 LLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLE 573
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 574 ERGREILMK 582
>sp|Q28718|CNGA2_RABIT Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus
GN=CNGA2 PE=2 SV=1
Length = 664
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 95/129 (73%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD ICRKG++ +EM+II +G L V+++ G
Sbjct: 452 VRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYA 511
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+++L+
Sbjct: 512 LLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLE 571
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 572 ERGREILMK 580
>sp|Q00195|CNGA2_RAT Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus
GN=Cnga2 PE=2 SV=1
Length = 664
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 95/129 (73%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD ICRKG++ +EM+II +G L V+++ G
Sbjct: 454 VRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYA 513
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+++L+
Sbjct: 514 LLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLE 573
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 574 ERGREILMK 582
>sp|Q03041|CNGA2_BOVIN Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2
PE=1 SV=1
Length = 663
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +F+PGD ICRKG++ +EM+II +G L V+++ G
Sbjct: 452 VRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYA 511
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 512 LLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKRVLE 571
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 572 ERGREILMK 580
>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2
SV=1
Length = 682
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ+C+ L +LVLK++ +++PGD ICRKG++ +EM+II +G L V+++ G
Sbjct: 445 VRIFQDCEAGLLVELVLKLRPQVYSPGDYICRKGDIGKEMYIIKEGQLAVVADDGVTQFA 504
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+AQ++L+
Sbjct: 505 LLTAGGCFGEISILNIQGSKMGNRRTANIRSIGYSDLFCLSKDDLMEAVAEYPDAQKVLE 564
Query: 125 NLGRKRL 131
GR+ L
Sbjct: 565 ERGREIL 571
>sp|Q16280|CNGA2_HUMAN Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2
PE=2 SV=2
Length = 664
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +F+PGD ICRKG++ +EM+II +G L V+++ G
Sbjct: 452 VRIFHDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYA 511
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+++L+
Sbjct: 512 LLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLE 571
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 572 ERGREILMK 580
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +++PGD ICRKG++ REM+II +G L V+++ G
Sbjct: 429 VRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGVTQFV 488
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA++RS+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 489 VLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLE 548
Query: 125 NLGRKRLME 133
G++ LM+
Sbjct: 549 EKGKQILMK 557
>sp|Q24278|CNG_DROME Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster
GN=Cng PE=2 SV=2
Length = 665
Score = 123 bits (308), Expect = 5e-28, Method: Composition-based stats.
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG-RVLT 67
V IF + +P L LVLK+K +F+PGD ICRKG+V +EM+I+ G L V+ + G VL
Sbjct: 427 VRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLA 486
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
T+ AG FGE+ +L + G N+RTA+VRS+GY++LF L++ D+ + DYPEA+ L
Sbjct: 487 TLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLT 546
Query: 125 NLGRKRLMEAKNLNKKFKVDAEK 147
G + L + L+++ D+++
Sbjct: 547 QRGCQLLRKDGLLDEQIFADSQR 569
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +++PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 469 VRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFV 528
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA+++S+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 529 VLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLE 588
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 589 EKGRQILMK 597
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +++PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 468 VRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFV 527
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA+++S+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 528 VLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLE 587
Query: 125 NLGRKRLME 133
GR+ LM+
Sbjct: 588 EKGRQILMK 596
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 99/145 (68%), Gaps = 8/145 (5%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ C+ L +LVLK++ ++PG+ +CRKG++ REM+II +G L V+++ G
Sbjct: 346 VQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYA 405
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG +FGEI I+N+ G N+RTA+++S+GY++LF LS+ED+ + +YP+AQ +++
Sbjct: 406 VLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQAVME 465
Query: 125 NLGRKRLMEAKNLNKKFKVDAEKSK 149
GR+ L++ L+ V+AE ++
Sbjct: 466 EKGREILLKMNKLD----VNAEAAE 486
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 99/145 (68%), Gaps = 8/145 (5%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ C+ L +LVLK++ ++PG+ +CRKG++ REM+II +G L V+++ G
Sbjct: 346 VQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYA 405
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG +FGEI I+N+ G N+RTA+++S+GY++LF LS+ED+ + +YP+AQ +++
Sbjct: 406 VLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQAVME 465
Query: 125 NLGRKRLMEAKNLNKKFKVDAEKSK 149
GR+ L++ L+ V+AE ++
Sbjct: 466 EKGREILLKMNKLD----VNAEAAE 486
>sp|P29973|CNGA1_HUMAN cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1
SV=3
Length = 690
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +++PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 477 VRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFV 536
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA+++S+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 537 VLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLE 596
Query: 125 NLGRKRLME 133
G++ LM+
Sbjct: 597 EKGKQILMK 605
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +++PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 476 VRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFV 535
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA+++S+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 536 VLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLE 595
Query: 125 NLGRKRLME 133
G++ LM+
Sbjct: 596 EKGKQILMK 604
>sp|Q8IV77|CNGA4_HUMAN Cyclic nucleotide-gated cation channel alpha-4 OS=Homo sapiens
GN=CNGA4 PE=1 SV=3
Length = 575
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 99/145 (68%), Gaps = 8/145 (5%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IFQ C+ L +LVLK++ ++PG+ +CRKG++ +EM+II +G L V+++ G
Sbjct: 346 VQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYA 405
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ AG +FGEI I+N+ G N+RTA+++S+GY++LF LS+ED+ + +YP+AQ I++
Sbjct: 406 VLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIME 465
Query: 125 NLGRKRLMEAKNLNKKFKVDAEKSK 149
GR+ L++ L+ V+AE ++
Sbjct: 466 EKGREILLKMNKLD----VNAEAAE 486
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV-LT 67
V IF +C+ L +LVLK++ +++PGD IC+KG++ REM+II +G L V+++ G
Sbjct: 475 VRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFV 534
Query: 68 TMKAGDFFGEIGILNLDGL---NKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124
+ G +FGEI ILN+ G N+RTA+++S+GY++LF LS++D++ A+ +YP+A+ +L+
Sbjct: 535 VLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKGMLE 594
Query: 125 NLGRKRLME 133
G++ LM+
Sbjct: 595 EKGKQILMK 603
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 107 bits (267), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ESG 63
V V +FQ C + + D++ ++++ ++ P D +C+KGE+ REM+II G ++V+ +
Sbjct: 957 VSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGK 1016
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEIL 123
VL T+KAG FGEI +L + G N+RTA+V + G+ LF L ++D+ + YPE+Q++L
Sbjct: 1017 SVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLL 1076
Query: 124 QNLGRKRLMEAKNLNKKFK 142
+ R R++ + N K+ K
Sbjct: 1077 RKKAR-RMLRSNNKPKEEK 1094
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus GN=CNGB1
PE=1 SV=1
Length = 1394
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ESG 63
V V +FQ C + + D++ ++++ ++ P D +C+KGE+ REM+II G ++V+ +
Sbjct: 1071 VSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGK 1130
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEIL 123
VL T+KAG FGEI +L + G N+RTA+V + G+ LF L ++D+ + YPE+Q++L
Sbjct: 1131 SVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLL 1190
Query: 124 QNLGRKRLMEAKNLNK 139
+ R+ L +N NK
Sbjct: 1191 RKKARRML---RNNNK 1203
>sp|Q9JJZ9|CNGB3_MOUSE Cyclic nucleotide-gated cation channel beta-3 OS=Mus musculus
GN=Cngb3 PE=1 SV=1
Length = 694
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGRVL 66
V +F+ C + ++DL+L++K+ I+ PGD +C+KGE+ +EM+II G ++V+ + +VL
Sbjct: 514 VELFKGCDTQMIYDLLLRLKSTIYLPGDFVCKKGEIGKEMYIIKHGEVQVLGGPDGAQVL 573
Query: 67 TTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEIL 123
T+KAG FGEI +L G N+RTADV + G+A L +L ++ + + YP ++++L
Sbjct: 574 VTLKAGSVFGEISLLAKGGGNRRTADVVAHGFANLLTLDKKTLQEILLHYPTSKKLL 630
>sp|Q9NQW8|CNGB3_HUMAN Cyclic nucleotide-gated cation channel beta-3 OS=Homo sapiens
GN=CNGB3 PE=1 SV=2
Length = 809
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESG 63
+ V +F+ C + ++D++L++K+ ++ PGD +C+KGE+ +EM+II G ++V+ +
Sbjct: 519 ISKVDLFKGCDTQMIYDMLLRLKSVLYLPGDFVCKKGEIGKEMYIIKHGEVQVLGGPDGT 578
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEIL 123
+VL T+KAG FGEI +L G N+RTA+V + G+A L +L ++ + + YP+++ IL
Sbjct: 579 KVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGFANLLTLDKKTLQEILVHYPDSERIL 638
Query: 124 QNLGR 128
R
Sbjct: 639 MKKAR 643
>sp|Q8MJD7|CNGB3_CANFA Cyclic nucleotide-gated cation channel beta-3 OS=Canis familiaris
GN=CNGB3 PE=1 SV=1
Length = 782
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESG 63
+ V +F+ C + ++D++L++K+ ++ PGD +C+KGE+ +EM+II G ++V+ S+
Sbjct: 514 ISKVELFKGCDTQMIYDMLLRLKSTVYLPGDFVCKKGEIGKEMYIIKQGEVQVLGGSDGA 573
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEIL 123
+VL T+KAG FGEI +L G N+RTA+V + G+A L +L ++ + + YP+++++L
Sbjct: 574 QVLVTLKAGAVFGEISLLAGRGGNRRTANVIAHGFANLLTLDKKTLQEILVHYPDSEKLL 633
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 5 CVGVVT---IFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISE 61
C G+V +F P F+ ++ K++ +F PGDL+ R+G V R+M+ I G+L V++
Sbjct: 419 CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR 478
Query: 62 SGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121
R T + G +FGEI +L +RTA VR+ Y L+SLS + + ++++P +
Sbjct: 479 GARD-TRLTDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRR 534
Query: 122 ILQNLGRKRLMEAKNLN 138
+ + RL+ N
Sbjct: 535 AFETVAMDRLLRIGKKN 551
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 5 CVGVVT---IFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISE 61
C G+V +F P F+ ++ K++ +F PGDL+ R+G V R+M+ I G+L V++
Sbjct: 418 CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR 477
Query: 62 SGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121
R T + G +FGEI +L +RTA VR+ Y L+SLS + + ++++P +
Sbjct: 478 GARD-TRLTDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRR 533
Query: 122 ILQNLGRKRL 131
+ + RL
Sbjct: 534 AFETVAMDRL 543
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 5 CVGVVT---IFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISE 61
C G+V +F P F+ ++ K++ +F PGDL+ R+G V R+M+ I G+L V++
Sbjct: 418 CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR 477
Query: 62 SGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121
R T + G +FGEI +L +RTA VR+ Y L+SLS + + ++++P +
Sbjct: 478 GARD-TRLTDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRR 533
Query: 122 ILQNLGRKRL 131
+ + RL
Sbjct: 534 AFETVAMDRL 543
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G + ++M+ I G++ V+++ G
Sbjct: 590 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK-GNK 648
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
T + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 649 ETKLADGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 705
Query: 126 LGRKRL 131
+ RL
Sbjct: 706 VALDRL 711
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G + ++M+ I G++ V+++ G
Sbjct: 591 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK-GNK 649
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
T + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 650 ETKLADGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 706
Query: 126 LGRKRL 131
+ RL
Sbjct: 707 VALDRL 712
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G + ++M+ I G++ V+++ G
Sbjct: 590 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK-GNK 648
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
T + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 649 ETKLADGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 705
Query: 126 LGRKRL 131
+ RL
Sbjct: 706 VALDRL 711
>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Rattus norvegicus GN=Hcn1
PE=2 SV=1
Length = 910
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G V ++M+ I G+ VI++S +
Sbjct: 459 VATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKE 518
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 519 M-KLTDGSYFGEICLLT---KGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 574
Query: 126 LGRKRL--MEAKN--LNKKFKVD 144
+ RL + KN L +KF+ D
Sbjct: 575 VAIDRLDRIGKKNSILLQKFQKD 597
>sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Oryctolagus cuniculus
GN=HCN1 PE=2 SV=2
Length = 822
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G V ++M+ I G+ VI++S +
Sbjct: 406 VATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKE 465
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 466 M-KLTDGSYFGEICLLT---KGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 521
Query: 126 LGRKRL--MEAKN--LNKKFKVD 144
+ RL + KN L +KF+ D
Sbjct: 522 VAIDRLDRIGKKNSILLQKFQKD 544
>sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Mus musculus GN=Hcn1 PE=1
SV=1
Length = 910
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G V ++M+ I G+ VI++S +
Sbjct: 459 VATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKE 518
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 519 M-KLTDGSYFGEICLLT---KGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 574
Query: 126 LGRKRL--MEAKN--LNKKFKVD 144
+ RL + KN L +KF+ D
Sbjct: 575 VAIDRLDRIGKKNSILLQKFQKD 597
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G V ++M+ I G+ VI++S +
Sbjct: 470 VATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKE 529
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 530 M-KLTDGSYFGEICLLT---KGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 585
Query: 126 LGRKRL--MEAKN--LNKKFKVD 144
+ RL + KN L +KF+ D
Sbjct: 586 VAIDRLDRIGKKNSILLQKFQKD 608
>sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Rattus norvegicus GN=Hcn2
PE=2 SV=3
Length = 863
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K+K +F PGD I R+G + ++M+ I G++ V+++ +
Sbjct: 512 VASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE 571
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 572 M-KLSDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 627
Query: 126 LGRKRL 131
+ RL
Sbjct: 628 VAIDRL 633
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K+K +F PGD I R+G + ++M+ I G++ V+++ +
Sbjct: 539 VASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE 598
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 599 M-KLSDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 654
Query: 126 LGRKRL 131
+ RL
Sbjct: 655 VAIDRL 660
>sp|O70507|HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Mus musculus GN=Hcn4 PE=1
SV=2
Length = 1186
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K++ +F PGD I R+G + ++M+ I G++ V+++ G
Sbjct: 590 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK-GNK 648
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYP 117
T + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP
Sbjct: 649 ETRLADGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYP 697
>sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Mus musculus GN=Hcn2 PE=1
SV=1
Length = 863
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V + +F P F+ ++ K+K +F PGD I R+G + ++M+ I G++ V+++ +
Sbjct: 512 VASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE 571
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ + G +FGEI +L +RTA VR+ Y L+SLS ++ +++YP + +
Sbjct: 572 M-KLSDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 627
Query: 126 LGRKRL 131
+ RL
Sbjct: 628 VAIDRL 633
>sp|Q2K5E1|CNGK1_RHIEC Cyclic nucleotide-gated potassium channel RHE_CH03180 OS=Rhizobium
etli (strain CFN 42 / ATCC 51251) GN=RHE_CH03180 PE=3
SV=1
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V V +FQ+ L ++V ++ I G +ICRKGEV +MF I +G + V + V
Sbjct: 229 VAAVPLFQKLGSAALIEIVRALRPRIVPAGAVICRKGEVGDQMFFIVEGRVTVATPDHPV 288
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ AG+FFGE+ +++ D R+A V + L SL D PE E ++
Sbjct: 289 --ELGAGNFFGEMALISGD---PRSATVSAATEVSLLSLYAVDFQILSSSSPEIAETIRK 343
Query: 126 LGRKR 130
+R
Sbjct: 344 TALER 348
>sp|Q98GN8|CNGK1_RHILO Cyclic nucleotide-gated potassium channel mll3241 OS=Rhizobium loti
(strain MAFF303099) GN=mll3241 PE=1 SV=1
Length = 355
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRV 65
V V +FQ+ P L ++V ++A G +ICR GE MF + +G + V + +
Sbjct: 230 VAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP-- 287
Query: 66 LTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQN 125
+ G FFGE+ +++ + R+A V + L SL D PE EI +
Sbjct: 288 -VELGPGAFFGEMALISGE---PRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRK 343
Query: 126 LGRKR 130
+R
Sbjct: 344 TALER 348
>sp|O54852|KCNH7_RAT Potassium voltage-gated channel subfamily H member 7 OS=Rattus
norvegicus GN=Kcnh7 PE=1 SV=1
Length = 1195
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
T+ Q C+ L L +K K PGD + G+V ++ ++ G +E++ +
Sbjct: 738 TLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDD- 796
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPE-AQEI 122
V+ + D FGE+ L K ADVR++ Y +L + RED+L + YPE +
Sbjct: 797 IVVAILGKNDIFGEMVHLYAKP-GKSNADVRALTYCDLHKIQREDLLEVLDMYPEFSDHF 855
Query: 123 LQNL 126
L NL
Sbjct: 856 LTNL 859
>sp|Q9ER47|KCNH7_MOUSE Potassium voltage-gated channel subfamily H member 7 OS=Mus
musculus GN=Kcnh7 PE=2 SV=2
Length = 1195
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
T+ Q C+ L L +K K PGD + G+V ++ ++ G +E++ +
Sbjct: 738 TLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDD- 796
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPE-AQEI 122
V+ + D FGE+ L K ADVR++ Y +L + RED+L + YPE +
Sbjct: 797 IVVAILGKNDIFGEMVHLYAKP-GKSNADVRALTYCDLHKIQREDLLEVLDMYPEFSDHF 855
Query: 123 LQNL 126
L NL
Sbjct: 856 LTNL 859
>sp|Q9NS40|KCNH7_HUMAN Potassium voltage-gated channel subfamily H member 7 OS=Homo
sapiens GN=KCNH7 PE=2 SV=2
Length = 1196
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
T+ Q C+ L L +K K PGD + G+V ++ ++ G +E++ +
Sbjct: 738 TLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDD- 796
Query: 64 RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPE-AQEI 122
V+ + D FGE+ L K ADVR++ Y +L + RED+L + YPE +
Sbjct: 797 IVVAILGKNDIFGEMVHLYAKP-GKSNADVRALTYCDLHKIQREDLLEVLDMYPEFSDHF 855
Query: 123 LQNL 126
L NL
Sbjct: 856 LTNL 859
>sp|Q8WNY2|KCNH2_RABIT Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus
cuniculus GN=KCNH2 PE=2 SV=3
Length = 1161
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
++ Q C+P + L L +K K PGD + G++ ++ I+ G +E++
Sbjct: 737 SLLQHCKPFRGATKDCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL-RGD 795
Query: 64 RVLTTMKAGDFFGEIGILNLDGL-NKRTADVRSVGYAELFSLSREDVLSAMKDYPE 118
V+ + D FGE LNL K DVR++ Y +L + R+D+L + YPE
Sbjct: 796 VVVAILGKNDIFGEP--LNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPE 849
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
++ Q C+P L L +K K PGD + G++ ++ I+ G +E++
Sbjct: 737 SLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL-RGD 795
Query: 64 RVLTTMKAGDFFGEIGILNLDGL-NKRTADVRSVGYAELFSLSREDVLSAMKDYPE 118
V+ + D FGE LNL K DVR++ Y +L + R+D+L + YPE
Sbjct: 796 VVVAILGKNDIFGEP--LNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPE 849
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
++ Q C+P L L +K K PGD + G++ ++ I+ G +E++
Sbjct: 737 SLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL-RGD 795
Query: 64 RVLTTMKAGDFFGEIGILNLDGL-NKRTADVRSVGYAELFSLSREDVLSAMKDYPE 118
V+ + D FGE LNL K DVR++ Y +L + R+D+L + YPE
Sbjct: 796 VVVAILGKNDIFGEP--LNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPE 849
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
++ Q C+P L L +K K PGD + G++ ++ I+ G +E++
Sbjct: 735 SLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL-RGD 793
Query: 64 RVLTTMKAGDFFGEIGILNLDGL-NKRTADVRSVGYAELFSLSREDVLSAMKDYPE 118
V+ + D FGE LNL K DVR++ Y +L + R+D+L + YPE
Sbjct: 794 VVVAILGKNDIFGEP--LNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPE 847
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 10 TIFQECQP------EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESG 63
++ Q C+P L L +K K PGD + G++ ++ I+ G +E++
Sbjct: 734 SLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL-RGD 792
Query: 64 RVLTTMKAGDFFGEIGILNLDGL-NKRTADVRSVGYAELFSLSREDVLSAMKDYPE 118
V+ + D FGE LNL K DVR++ Y +L + R+D+L + YPE
Sbjct: 793 VVVAILGKNDIFGEP--LNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPE 846
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,020,306
Number of Sequences: 539616
Number of extensions: 2020119
Number of successful extensions: 6740
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 6536
Number of HSP's gapped (non-prelim): 198
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)