Query psy1122
Match_columns 150
No_of_seqs 114 out of 1376
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 21:13:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dn7_A Cyclic nucleotide bindi 99.9 1.2E-25 4.2E-30 150.4 14.6 133 1-136 4-141 (194)
2 2pqq_A Putative transcriptiona 99.9 2.2E-25 7.5E-30 143.0 14.5 132 3-137 4-139 (149)
3 3mdp_A Cyclic nucleotide-bindi 99.9 3.1E-25 1.1E-29 141.3 14.3 123 3-128 5-135 (142)
4 2ptm_A Hyperpolarization-activ 99.9 3.7E-25 1.3E-29 148.8 11.8 125 4-131 71-195 (198)
5 4ev0_A Transcription regulator 99.9 3.4E-24 1.2E-28 145.4 15.7 128 6-136 1-132 (216)
6 3gyd_A CNMP-BD protein, cyclic 99.9 3.1E-24 1E-28 143.3 14.8 131 4-137 39-177 (187)
7 3dv8_A Transcriptional regulat 99.9 5.9E-24 2E-28 144.6 16.4 131 3-136 2-138 (220)
8 2z69_A DNR protein; beta barre 99.9 3.2E-24 1.1E-28 138.3 12.9 126 4-132 12-142 (154)
9 3bpz_A Potassium/sodium hyperp 99.9 2.2E-24 7.4E-29 145.5 12.2 128 4-135 72-199 (202)
10 3d0s_A Transcriptional regulat 99.9 1.7E-24 5.8E-29 148.1 11.3 130 3-135 5-138 (227)
11 3e97_A Transcriptional regulat 99.9 6.8E-24 2.3E-28 145.5 13.9 131 3-136 5-139 (231)
12 1vp6_A CNBD, cyclic-nucleotide 99.9 2.5E-24 8.7E-29 136.6 10.6 123 4-132 11-133 (138)
13 1zyb_A Transcription regulator 99.9 1.3E-23 4.6E-28 144.3 14.9 132 3-137 17-155 (232)
14 3iwz_A CAP-like, catabolite ac 99.9 2.4E-23 8.3E-28 142.5 16.2 131 4-136 11-150 (230)
15 3fx3_A Cyclic nucleotide-bindi 99.9 6.4E-24 2.2E-28 146.1 13.1 131 3-136 10-144 (237)
16 3dkw_A DNR protein; CRP-FNR, H 99.9 5.2E-24 1.8E-28 145.5 10.9 128 3-133 8-140 (227)
17 3ocp_A PRKG1 protein; serine/t 99.9 9.2E-24 3.2E-28 134.4 11.2 114 4-121 23-136 (139)
18 3ukn_A Novel protein similar t 99.9 4.9E-23 1.7E-27 139.8 15.3 118 6-127 77-196 (212)
19 4f8a_A Potassium voltage-gated 99.9 5.5E-23 1.9E-27 133.4 13.7 120 3-124 26-145 (160)
20 2gau_A Transcriptional regulat 99.9 4.4E-23 1.5E-27 141.5 13.9 126 8-136 14-143 (232)
21 3idb_B CAMP-dependent protein 99.9 1.7E-23 5.8E-28 136.3 11.1 113 4-119 38-153 (161)
22 3pna_A CAMP-dependent protein 99.9 1.7E-23 5.8E-28 135.4 10.0 114 4-121 38-151 (154)
23 3ryp_A Catabolite gene activat 99.9 5E-22 1.7E-26 134.2 15.5 124 10-135 2-129 (210)
24 4ava_A Lysine acetyltransferas 99.9 2.4E-22 8.2E-27 144.7 14.1 126 3-132 12-140 (333)
25 2oz6_A Virulence factor regula 99.9 9E-22 3.1E-26 132.7 16.1 117 15-134 1-125 (207)
26 2fmy_A COOA, carbon monoxide o 99.9 3.2E-22 1.1E-26 136.3 13.8 124 3-136 3-129 (220)
27 3e6c_C CPRK, cyclic nucleotide 99.9 7.3E-22 2.5E-26 137.0 14.5 128 3-136 8-139 (250)
28 1wgp_A Probable cyclic nucleot 99.9 4.3E-23 1.5E-27 130.8 7.2 115 3-119 5-132 (137)
29 2d93_A RAP guanine nucleotide 99.9 1.6E-22 5.6E-27 127.9 8.4 111 4-118 16-128 (134)
30 1ft9_A Carbon monoxide oxidati 99.9 7.1E-22 2.4E-26 134.8 12.0 122 5-136 1-125 (222)
31 3kcc_A Catabolite gene activat 99.9 3.2E-21 1.1E-25 134.6 15.3 122 13-136 55-180 (260)
32 3shr_A CGMP-dependent protein 99.9 1.2E-21 4.2E-26 139.0 12.3 130 4-137 157-292 (299)
33 1o5l_A Transcriptional regulat 99.9 1.4E-21 4.7E-26 132.7 11.6 124 9-135 4-132 (213)
34 3of1_A CAMP-dependent protein 99.9 1.1E-21 3.7E-26 135.3 9.4 114 4-121 7-120 (246)
35 2qcs_B CAMP-dependent protein 99.9 4.4E-21 1.5E-25 135.6 11.9 114 4-121 39-152 (291)
36 3shr_A CGMP-dependent protein 99.9 1.1E-20 3.8E-25 134.0 13.3 112 4-119 39-150 (299)
37 2bgc_A PRFA; bacterial infecti 99.8 1.3E-19 4.5E-24 124.8 15.9 120 13-136 2-130 (238)
38 3of1_A CAMP-dependent protein 99.8 1.3E-20 4.6E-25 129.8 11.0 114 4-120 125-238 (246)
39 4din_B CAMP-dependent protein 99.8 8.2E-21 2.8E-25 139.2 9.4 114 4-121 130-243 (381)
40 3tnp_B CAMP-dependent protein 99.8 3.9E-20 1.3E-24 137.0 11.7 114 4-120 145-261 (416)
41 3la7_A Global nitrogen regulat 99.8 1.7E-19 5.7E-24 124.7 14.1 118 17-135 30-154 (243)
42 3tnp_B CAMP-dependent protein 99.8 4.6E-20 1.6E-24 136.6 11.7 129 3-134 266-404 (416)
43 2qcs_B CAMP-dependent protein 99.8 1.2E-19 4E-24 128.2 11.9 113 4-119 157-274 (291)
44 1o7f_A CAMP-dependent RAP1 gua 99.8 2.3E-19 7.9E-24 134.4 12.3 122 4-128 337-460 (469)
45 1o7f_A CAMP-dependent RAP1 gua 99.8 4.7E-19 1.6E-23 132.7 12.3 112 4-119 42-159 (469)
46 4din_B CAMP-dependent protein 99.8 1.8E-19 6.3E-24 132.1 8.0 117 4-123 248-370 (381)
47 3beh_A MLL3241 protein; transm 99.8 7E-21 2.4E-25 138.4 0.1 125 4-134 228-352 (355)
48 3cf6_E RAP guanine nucleotide 99.8 3E-18 1E-22 133.7 11.2 113 4-119 32-146 (694)
49 3b02_A Transcriptional regulat 99.7 1.4E-17 4.7E-22 111.4 10.5 97 29-135 1-101 (195)
50 4f7z_A RAP guanine nucleotide 99.7 3.6E-17 1.2E-21 132.3 12.8 111 5-119 43-159 (999)
51 2zcw_A TTHA1359, transcription 99.7 1.2E-16 4.2E-21 107.2 8.0 82 24-110 2-89 (202)
52 4f7z_A RAP guanine nucleotide 99.7 4.3E-16 1.5E-20 126.0 12.5 109 4-115 337-447 (999)
53 3rns_A Cupin 2 conserved barre 95.9 0.13 4.6E-06 34.6 10.0 68 27-104 39-106 (227)
54 2ozj_A Cupin 2, conserved barr 95.0 0.23 7.8E-06 29.2 8.0 66 29-104 42-107 (114)
55 3fjs_A Uncharacterized protein 94.4 0.41 1.4E-05 28.3 9.4 66 28-103 39-104 (114)
56 2fqp_A Hypothetical protein BP 94.4 0.16 5.5E-06 29.1 5.9 48 28-75 21-69 (97)
57 3jzv_A Uncharacterized protein 93.6 0.24 8.3E-06 31.7 6.2 89 29-125 57-155 (166)
58 1dgw_A Canavalin; duplicated s 93.5 0.2 6.9E-06 32.4 5.7 50 27-76 43-94 (178)
59 3ibm_A Cupin 2, conserved barr 93.4 0.3 1E-05 31.3 6.3 46 28-75 59-104 (167)
60 3es1_A Cupin 2, conserved barr 93.1 0.39 1.3E-05 31.0 6.5 48 27-75 81-128 (172)
61 3kgz_A Cupin 2 conserved barre 93.0 0.25 8.4E-06 31.3 5.3 45 29-75 48-92 (156)
62 3es4_A Uncharacterized protein 92.9 0.26 9E-06 29.7 5.1 46 29-76 46-91 (116)
63 1yhf_A Hypothetical protein SP 92.7 0.84 2.9E-05 26.6 9.4 67 28-104 43-109 (115)
64 3rns_A Cupin 2 conserved barre 92.7 1.2 4.1E-05 29.8 8.8 67 28-104 156-223 (227)
65 3bcw_A Uncharacterized protein 92.5 0.24 8.3E-06 30.1 4.6 46 29-76 53-98 (123)
66 3h8u_A Uncharacterized conserv 92.2 1.1 3.7E-05 26.6 8.1 48 27-75 41-89 (125)
67 2pfw_A Cupin 2, conserved barr 92.0 1.1 3.7E-05 26.2 9.7 68 27-104 36-103 (116)
68 3lag_A Uncharacterized protein 91.7 0.096 3.3E-06 30.5 2.0 48 28-75 20-69 (98)
69 3lwc_A Uncharacterized protein 91.6 1.3 4.6E-05 26.5 10.6 46 28-76 43-88 (119)
70 2i45_A Hypothetical protein; n 91.6 0.78 2.7E-05 26.5 6.1 68 32-108 35-102 (107)
71 2phl_A Phaseolin; plant SEED s 91.6 1.4 4.7E-05 32.4 8.5 49 26-74 53-103 (397)
72 2bnm_A Epoxidase; oxidoreducta 91.5 1.1 3.8E-05 29.0 7.4 48 29-76 121-173 (198)
73 2pyt_A Ethanolamine utilizatio 91.4 1.6 5.3E-05 26.8 8.2 45 28-76 60-104 (133)
74 4e2g_A Cupin 2 conserved barre 90.2 1.9 6.3E-05 25.6 8.4 47 27-75 43-89 (126)
75 2o1q_A Putative acetyl/propion 90.0 1.1 3.9E-05 27.8 6.1 48 27-76 46-95 (145)
76 1v70_A Probable antibiotics sy 89.6 1.7 5.9E-05 24.4 7.8 46 28-75 31-77 (105)
77 1j58_A YVRK protein; cupin, de 89.6 3.7 0.00013 29.7 9.4 49 28-76 260-312 (385)
78 2cav_A Protein (canavalin); vi 89.6 0.76 2.6E-05 34.3 5.7 49 27-75 88-138 (445)
79 2gu9_A Tetracenomycin polyketi 89.5 1.9 6.5E-05 24.8 7.7 47 27-75 23-72 (113)
80 1vj2_A Novel manganese-contain 88.7 2.5 8.7E-05 25.2 7.2 46 28-75 51-96 (126)
81 2ea7_A 7S globulin-1; beta bar 88.7 1 3.5E-05 33.5 5.8 50 26-75 62-113 (434)
82 3h7j_A Bacilysin biosynthesis 88.6 2.9 0.0001 28.2 7.8 46 29-76 149-195 (243)
83 1sfn_A Conserved hypothetical 88.5 3.7 0.00012 27.8 8.2 49 26-76 166-215 (246)
84 1uij_A Beta subunit of beta co 88.5 0.97 3.3E-05 33.4 5.6 50 26-75 50-101 (416)
85 2qjv_A Uncharacterized IOLB-li 88.4 4.8 0.00016 27.9 8.8 88 14-105 18-109 (270)
86 1lr5_A Auxin binding protein 1 88.4 3 0.0001 26.1 7.3 48 28-75 44-98 (163)
87 3s7i_A Allergen ARA H 1, clone 88.1 1.2 4.1E-05 32.9 5.8 56 28-83 47-108 (418)
88 1o4t_A Putative oxalate decarb 88.0 3 0.0001 25.2 7.4 46 28-75 60-106 (133)
89 2vqa_A SLL1358 protein, MNCA; 88.0 5.6 0.00019 28.4 9.3 48 28-75 55-106 (361)
90 3fz3_A Prunin; TREE NUT allerg 88.0 1.9 6.5E-05 32.9 6.9 57 20-76 389-450 (531)
91 1o5u_A Novel thermotoga mariti 87.8 2.7 9.1E-05 24.4 9.7 48 26-76 32-79 (101)
92 2vqa_A SLL1358 protein, MNCA; 87.8 4.2 0.00014 29.0 8.5 50 27-76 236-289 (361)
93 1j58_A YVRK protein; cupin, de 87.6 1.8 6.1E-05 31.3 6.5 49 27-75 81-132 (385)
94 2b8m_A Hypothetical protein MJ 87.5 2.9 9.8E-05 24.4 6.8 46 29-75 31-76 (117)
95 2vpv_A Protein MIF2, MIF2P; nu 87.3 4.2 0.00014 26.0 7.7 46 29-76 92-139 (166)
96 3c3v_A Arachin ARAH3 isoform; 87.2 2 6.9E-05 32.7 6.7 55 21-75 368-427 (510)
97 2f4p_A Hypothetical protein TM 87.0 3.8 0.00013 25.3 7.7 48 28-76 51-98 (147)
98 1fxz_A Glycinin G1; proglycini 86.6 2.4 8.2E-05 32.0 6.8 50 26-75 339-393 (476)
99 2d5f_A Glycinin A3B4 subunit; 86.2 2.7 9.2E-05 31.8 6.9 56 21-76 363-423 (493)
100 2opk_A Hypothetical protein; p 85.8 3.5 0.00012 24.2 6.1 35 42-76 50-84 (112)
101 2e9q_A 11S globulin subunit be 85.7 3 0.0001 31.3 6.9 57 20-76 317-378 (459)
102 1zvf_A 3-hydroxyanthranilate 3 85.3 5.6 0.00019 25.7 7.1 55 44-106 53-113 (176)
103 3bu7_A Gentisate 1,2-dioxygena 85.1 4.1 0.00014 29.9 7.2 78 28-113 297-375 (394)
104 3d0j_A Uncharacterized protein 84.9 5.1 0.00017 24.9 6.5 61 39-107 44-110 (140)
105 4b29_A Dimethylsulfoniopropion 84.7 3.3 0.00011 27.7 6.1 46 29-75 136-181 (217)
106 3d82_A Cupin 2, conserved barr 84.6 3.7 0.00013 23.0 7.3 50 46-105 51-100 (102)
107 1yfu_A 3-hydroxyanthranilate-3 84.5 2 7E-05 27.7 4.8 33 44-76 54-88 (174)
108 4e2q_A Ureidoglycine aminohydr 84.3 5.4 0.00018 27.6 7.2 69 28-105 73-141 (266)
109 3l2h_A Putative sugar phosphat 84.0 1.8 6E-05 27.1 4.5 46 28-75 49-96 (162)
110 2q30_A Uncharacterized protein 83.7 4.4 0.00015 23.1 8.9 67 28-103 36-104 (110)
111 3bu7_A Gentisate 1,2-dioxygena 83.6 1.4 4.9E-05 32.3 4.3 48 28-76 126-173 (394)
112 3i7d_A Sugar phosphate isomera 83.5 2.2 7.4E-05 27.0 4.7 46 28-75 46-93 (163)
113 3ebr_A Uncharacterized RMLC-li 83.1 3.5 0.00012 26.1 5.5 46 26-75 43-88 (159)
114 2oa2_A BH2720 protein; 1017534 83.1 6.1 0.00021 24.2 7.7 47 29-75 47-98 (148)
115 2ozi_A Hypothetical protein RP 83.1 1.9 6.4E-05 24.9 3.9 49 28-76 20-70 (98)
116 2e9q_A 11S globulin subunit be 82.8 5.5 0.00019 29.9 7.2 58 18-75 56-137 (459)
117 3myx_A Uncharacterized protein 82.7 2.3 7.7E-05 29.0 4.7 46 29-76 171-216 (238)
118 3cew_A Uncharacterized cupin p 82.7 5.5 0.00019 23.5 7.4 46 28-75 29-76 (125)
119 2qnk_A 3-hydroxyanthranilate 3 82.6 7.4 0.00025 27.2 7.2 61 37-106 44-106 (286)
120 1fxz_A Glycinin G1; proglycini 82.5 7.4 0.00025 29.3 7.8 66 18-83 41-135 (476)
121 3ht1_A REMF protein; cupin fol 82.4 4.1 0.00014 24.6 5.6 45 30-75 44-89 (145)
122 2q1z_B Anti-sigma factor CHRR, 82.0 4.8 0.00017 26.3 6.0 65 26-104 126-192 (195)
123 3ksc_A LEGA class, prolegumin; 80.9 6.3 0.00022 29.9 7.0 55 21-75 354-413 (496)
124 3kgl_A Cruciferin; 11S SEED gl 80.3 6.4 0.00022 29.6 6.8 56 20-75 318-378 (466)
125 3h7j_A Bacilysin biosynthesis 79.6 11 0.00039 25.2 9.4 48 26-75 35-82 (243)
126 1rc6_A Hypothetical protein YL 79.5 7.5 0.00026 26.4 6.6 47 28-76 62-110 (261)
127 1y9q_A Transcriptional regulat 79.5 9.8 0.00034 24.3 9.0 46 29-76 108-155 (192)
128 3nw4_A Gentisate 1,2-dioxygena 79.4 3.7 0.00013 29.8 5.2 48 28-76 106-153 (368)
129 4axo_A EUTQ, ethanolamine util 79.3 9.3 0.00032 24.0 8.2 32 43-76 82-113 (151)
130 1fi2_A Oxalate oxidase, germin 79.3 11 0.00036 24.6 9.0 49 27-75 74-129 (201)
131 1sq4_A GLXB, glyoxylate-induce 79.3 5.2 0.00018 27.7 5.8 46 28-75 71-118 (278)
132 1sfn_A Conserved hypothetical 79.0 12 0.00042 25.2 9.2 45 28-76 53-97 (246)
133 1sq4_A GLXB, glyoxylate-induce 78.8 12 0.00043 25.8 7.6 48 26-75 192-240 (278)
134 3qac_A 11S globulin SEED stora 78.5 9.4 0.00032 28.7 7.2 55 21-75 319-378 (465)
135 3o14_A Anti-ecfsigma factor, C 77.8 7.1 0.00024 26.2 5.9 63 28-104 46-108 (223)
136 2d40_A Z3393, putative gentisa 77.8 8.6 0.0003 27.6 6.7 48 28-76 103-150 (354)
137 1sef_A Conserved hypothetical 77.7 7 0.00024 26.8 6.0 47 28-76 65-113 (274)
138 3ksc_A LEGA class, prolegumin; 77.5 13 0.00044 28.2 7.7 66 18-83 39-132 (496)
139 1sef_A Conserved hypothetical 77.2 15 0.00051 25.2 8.2 48 27-76 184-232 (274)
140 1rc6_A Hypothetical protein YL 77.2 14 0.00049 25.0 7.6 47 28-76 182-229 (261)
141 1x82_A Glucose-6-phosphate iso 76.8 12 0.00043 24.1 8.9 30 46-75 97-129 (190)
142 2d5f_A Glycinin A3B4 subunit; 75.4 16 0.00056 27.6 7.8 40 19-58 39-78 (493)
143 4i4a_A Similar to unknown prot 75.3 10 0.00035 22.3 9.4 80 28-115 37-118 (128)
144 3c3v_A Arachin ARAH3 isoform; 74.9 14 0.00047 28.2 7.3 40 19-58 42-81 (510)
145 3nw4_A Gentisate 1,2-dioxygena 74.0 18 0.00062 26.3 7.5 74 30-113 284-357 (368)
146 2d40_A Z3393, putative gentisa 73.7 22 0.00076 25.5 8.9 74 29-112 272-345 (354)
147 2o8q_A Hypothetical protein; c 73.5 8.1 0.00028 23.0 5.0 30 45-75 64-93 (134)
148 2phl_A Phaseolin; plant SEED s 71.4 28 0.00094 25.6 9.3 51 26-76 240-301 (397)
149 3qac_A 11S globulin SEED stora 70.4 28 0.00096 26.2 8.0 40 19-58 44-83 (465)
150 1y3t_A Hypothetical protein YX 70.2 18 0.00061 25.3 6.8 47 28-76 49-96 (337)
151 2ea7_A 7S globulin-1; beta bar 68.2 34 0.0012 25.4 8.1 57 19-75 260-333 (434)
152 1juh_A Quercetin 2,3-dioxygena 66.5 17 0.00057 26.0 6.0 34 42-75 68-104 (350)
153 3myx_A Uncharacterized protein 65.6 12 0.00041 25.4 4.8 39 34-75 55-93 (238)
154 4e2q_A Ureidoglycine aminohydr 64.4 32 0.0011 23.7 7.9 49 26-76 187-236 (266)
155 1uij_A Beta subunit of beta co 63.2 43 0.0015 24.7 9.6 57 19-75 243-317 (416)
156 3o14_A Anti-ecfsigma factor, C 62.7 31 0.0011 23.0 8.1 43 26-75 147-189 (223)
157 2qnk_A 3-hydroxyanthranilate 3 60.4 41 0.0014 23.5 7.8 69 27-106 209-277 (286)
158 1juh_A Quercetin 2,3-dioxygena 52.9 17 0.00057 26.0 4.0 70 34-112 261-333 (350)
159 2xlg_A SLL1785 protein, CUCA; 51.1 12 0.00043 25.3 3.0 46 30-75 48-112 (239)
160 2cav_A Protein (canavalin); vi 48.9 58 0.002 24.3 6.4 57 19-75 275-346 (445)
161 2xp1_A SPT6; transcription, IW 48.4 47 0.0016 21.4 5.2 36 9-50 14-49 (178)
162 1dgw_X Canavalin; duplicated s 48.1 24 0.00081 19.4 3.3 45 19-63 30-77 (79)
163 1vr3_A Acireductone dioxygenas 47.6 38 0.0013 22.1 4.7 32 45-76 104-138 (191)
164 1zrr_A E-2/E-2' protein; nicke 46.7 18 0.00062 23.3 3.1 32 45-76 100-133 (179)
165 3s7i_A Allergen ARA H 1, clone 43.0 55 0.0019 24.2 5.5 58 19-76 257-343 (418)
166 4h7l_A Uncharacterized protein 41.5 21 0.00071 22.6 2.7 32 42-75 63-96 (157)
167 3cjx_A Protein of unknown func 38.9 30 0.001 21.9 3.2 32 27-58 45-76 (165)
168 3e9v_A Protein BTG2; B-cell tr 36.6 69 0.0024 19.2 4.8 43 11-54 76-118 (120)
169 2arc_A ARAC, arabinose operon 33.7 47 0.0016 20.0 3.5 31 43-75 36-66 (164)
170 2vec_A YHAK, pirin-like protei 30.9 1.3E+02 0.0043 20.5 9.4 67 30-105 187-253 (256)
171 3bb6_A Uncharacterized protein 28.3 1E+02 0.0035 18.7 6.2 44 47-98 41-90 (127)
172 3kgl_A Cruciferin; 11S SEED gl 27.4 2E+02 0.0068 21.7 8.2 41 18-58 36-76 (466)
173 3bal_A Acetylacetone-cleaving 26.5 80 0.0027 19.8 3.5 31 28-58 49-79 (153)
174 4hur_A Virginiamycin A acetylt 23.2 1.6E+02 0.0055 19.1 6.2 47 67-116 138-186 (220)
175 2z15_A Protein TOB1; human TOB 21.9 1.4E+02 0.0049 18.1 4.8 48 7-55 76-123 (130)
176 3or8_A Transcription elongatio 21.6 1.8E+02 0.0061 19.0 5.0 36 8-48 7-43 (197)
177 2pa7_A DTDP-6-deoxy-3,4-keto-h 21.4 1.5E+02 0.0051 18.1 8.3 74 31-111 41-118 (141)
178 2qdr_A Uncharacterized protein 21.2 2.2E+02 0.0074 19.9 5.5 35 47-81 113-149 (303)
No 1
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=99.94 E-value=1.2e-25 Score=150.40 Aligned_cols=133 Identities=14% Similarity=0.176 Sum_probs=117.0
Q ss_pred CCccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeee
Q psy1122 1 MGVVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFG 76 (150)
Q Consensus 1 M~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g 76 (150)
|...++++++.|.++++++++.+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++.++.||++||
T Consensus 4 m~~~l~~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 4 MHTALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp CCHHHHHHHHTTSCCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 34567899999999999999999999999999999999999999999999999999995 46777 889999999999
Q ss_pred ee-eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 77 EI-GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 77 ~~-~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
+. .++.+ .++.++++|.++|+++.+|.+.|.+++.++|.+...+.....+++.....
T Consensus 84 e~~~~~~~---~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~ 141 (194)
T 3dn7_A 84 DYMAFQKQ---QPADFYIQSVENCELLSITYTEQENLFERIPALERYFRLVYQKSFAAAQL 141 (194)
T ss_dssp CHHHHHHT---CBCSSEEEESSCEEEEEEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHH
T ss_pred ehHHHhcC---CCCceEEEEECCEEEEEEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 87 45555 78999999999999999999999999999999777766666656554443
No 2
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=99.94 E-value=2.2e-25 Score=143.02 Aligned_cols=132 Identities=19% Similarity=0.344 Sum_probs=118.3
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~ 78 (150)
.++++++++|..++++++..+...++.+.|++|++|+.+|++++.+|||++|.++++ +++|+ ++..+.+|++||+.
T Consensus 4 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 83 (149)
T 2pqq_A 4 DDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGEL 83 (149)
T ss_dssp GGGGTSSTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGG
T ss_pred HHHhhhChhhhcCCHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechH
Confidence 568999999999999999999999999999999999999999999999999999995 35666 79999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHhh
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKNL 137 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~ 137 (150)
+++.+ .++.+++.|.++|+++.+|.+.|..++.++|.+...+.....+++......
T Consensus 84 ~~~~~---~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~ 139 (149)
T 2pqq_A 84 SLFDP---GPRTATGTALTEVKLLALGHGDLQPWLNVRPEVATALLRAVARRLRKTNDA 139 (149)
T ss_dssp GGTSC---EECSSEEEESSCEEEEEEEGGGHHHHHHHCTHHHHHHHHHHHHHHHHHHTT
T ss_pred HhcCC---CCcceEEEEccceEEEEEeHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 88876 789999999999999999999999999999997766666666576655544
No 3
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=99.93 E-value=3.1e-25 Score=141.30 Aligned_cols=123 Identities=15% Similarity=0.276 Sum_probs=108.0
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--E---EEEecCCCee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--V---LTTMKAGDFF 75 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~---~~~~~~g~~~ 75 (150)
.++++++++|.+++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++ .++|+ + +..+.+|++|
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 5 PERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIF 84 (142)
T ss_dssp TTGGGGSHHHHTSCHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEE
T ss_pred HHHHhhCchhccCCHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEe
Confidence 678999999999999999999999999999999999999999999999999999996 35564 6 8999999999
Q ss_pred eeeeeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHH-HHHHHHHH
Q psy1122 76 GEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQ-EILQNLGR 128 (150)
Q Consensus 76 g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~-~~~~~~~~ 128 (150)
|+.+++.+ .++.++++|.++|+++.+|.+.|.+++.++|.+. .+++.++.
T Consensus 85 G~~~~~~~---~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~l~~ 135 (142)
T 3mdp_A 85 GVSSLIKP---YHYTSSARATKPVRVVDINGARLREMSENNQALGQVLMNNVAA 135 (142)
T ss_dssp CGGGSSTT---CBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred chHHHcCC---CCceEEEEECCcEEEEEEeHHHHHHHHHHChHHHHHHHHHHHH
Confidence 99999876 7899999999999999999999999999999954 44444443
No 4
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.93 E-value=3.7e-25 Score=148.76 Aligned_cols=125 Identities=28% Similarity=0.587 Sum_probs=115.2
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
.+++++++|.+++++.+..++..++.+.|++|++|+.+|++++.+|||.+|.|+++.++|+++..+.+|++||+.+++.+
T Consensus 71 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~ 150 (198)
T 2ptm_A 71 DLVASVPFFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTR 150 (198)
T ss_dssp HHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHS
T ss_pred HHHhcCcchhcCCHHHHHHHHHhccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCC
Confidence 46888999999999999999999999999999999999999999999999999998778889999999999999999887
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRL 131 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~ 131 (150)
.++.++++|.++|+++.||.++|.+++.++|++...+...+..|+
T Consensus 151 ---~~~~~~~~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~rl 195 (198)
T 2ptm_A 151 ---ERRVASVKCETYCTLFSLSVQHFNQVLDEFPAMRKTMEEIAVRRL 195 (198)
T ss_dssp ---SCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHTCC
T ss_pred ---CccceEEEEeeEEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999997766666555454
No 5
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=99.92 E-value=3.4e-24 Score=145.43 Aligned_cols=128 Identities=25% Similarity=0.448 Sum_probs=111.1
Q ss_pred cccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeee
Q psy1122 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGIL 81 (150)
Q Consensus 6 l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~ 81 (150)
|+++++|.+++++++..+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.+|++||+.+++
T Consensus 1 L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~ 80 (216)
T 4ev0_A 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLL 80 (216)
T ss_dssp ---CGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHH
T ss_pred CCCChhhcCCCHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhc
Confidence 568899999999999999999999999999999999999999999999999995 46777 89999999999999888
Q ss_pred ccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 82 NLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 82 ~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
.+ .++.+++.|.++|+++.+|.+.|.+++.++|.+...+......++.....
T Consensus 81 ~~---~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~ 132 (216)
T 4ev0_A 81 DE---GERSASAVAVEDTELLALFREDYLALIRRLPLVAHNLAALLARRLREADL 132 (216)
T ss_dssp HC---CBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CC---CCcceEEEEcCCEEEEEEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHH
Confidence 76 78999999999999999999999999999999665555544445544443
No 6
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=99.92 E-value=3.1e-24 Score=143.26 Aligned_cols=131 Identities=19% Similarity=0.291 Sum_probs=113.8
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIG 79 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~ 79 (150)
++++++++|.+++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++ +++|+ ++..+.+|++||+.+
T Consensus 39 ~~L~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~ 118 (187)
T 3gyd_A 39 EIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMS 118 (187)
T ss_dssp HHHTTCCSSCCCCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHH
T ss_pred HHHhcCHhhhcCCHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHH
Confidence 57899999999999999999999999999999999999999999999999999995 46776 899999999999999
Q ss_pred eeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHH-HHHH---HHHHHHHHHHHhh
Q psy1122 80 ILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQ-EILQ---NLGRKRLMEAKNL 137 (150)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~-~~~~---~~~~~r~~~~~~~ 137 (150)
++.+ .++.++++|.++|+++.+|.+.|..++.++|.+. .+++ ....+|+......
T Consensus 119 ~l~~---~~~~~~v~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~rl~~~~~~ 177 (187)
T 3gyd_A 119 MIDG---MPRSASCVASLPTDFAVLSRDALYQLLANMPKLGNKVLIRLLQLLTARFRESYDR 177 (187)
T ss_dssp HHHC---CCCSSEEEEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCC---CCeeEEEEECCCeEEEEEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876 7899999999999999999999999999999954 4442 2223355544443
No 7
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=99.92 E-value=5.9e-24 Score=144.62 Aligned_cols=131 Identities=13% Similarity=0.153 Sum_probs=113.8
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCe--ee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDF--FG 76 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~--~g 76 (150)
+++++++++|..++++++..+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.||++ ||
T Consensus 2 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g 81 (220)
T 3dv8_A 2 MSFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLS 81 (220)
T ss_dssp ---CCSCGGGGTSCHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGG
T ss_pred cchHHhChhhhcCCHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehh
Confidence 468999999999999999999999999999999999999999999999999999995 46777 8899999999 68
Q ss_pred eeeeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 77 EIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
+.+++.+ .++.+++.|.++|+++.+|.+.|.+++.++|.+...+......++.....
T Consensus 82 ~~~~~~~---~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 138 (220)
T 3dv8_A 82 ASCIMRS---IQFEVTIEAEKDTDLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMW 138 (220)
T ss_dssp GGGGCTT---CCCCCEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC---CCCceEEEEeeeeEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 8888876 78999999999999999999999999999999666665555445544433
No 8
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=99.92 E-value=3.2e-24 Score=138.33 Aligned_cols=126 Identities=19% Similarity=0.284 Sum_probs=110.5
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEe--cCCc--EEEEecCCCeeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ESGR--VLTTMKAGDFFGEIG 79 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~g~--~~~~~~~g~~~g~~~ 79 (150)
++++++++|..++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++. ++|+ ++..+.+|++||+..
T Consensus 12 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~ 91 (154)
T 2z69_A 12 QLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAM 91 (154)
T ss_dssp HHHTTSTTTTTSCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGG
T ss_pred HHhhcChhhcCCCHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHh
Confidence 578999999999999999999999999999999999999999999999999999963 4566 789999999999999
Q ss_pred eeccCCCCc-eeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHH
Q psy1122 80 ILNLDGLNK-RTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLM 132 (150)
Q Consensus 80 ~~~~~~~~~-~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~ 132 (150)
++.+ .+ +.+++.|.++|+++.||.+.|..++.++|.+...+.....+|+.
T Consensus 92 ~~~~---~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~~~~rl~ 142 (154)
T 2z69_A 92 MFMD---TPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLH 142 (154)
T ss_dssp GGSS---CSBCSSEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred hccC---CCCCceEEEEccceEEEEECHHHHHHHHHHChHHHHHHHHHHHHHHH
Confidence 9876 56 99999999999999999999999999999965555444443554
No 9
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.92 E-value=2.2e-24 Score=145.50 Aligned_cols=128 Identities=29% Similarity=0.631 Sum_probs=114.8
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|.+++++.+..++..++.+.|++|++|+.+|++++.+|||.+|.|+++.++|+.. .+.+|++||+.+++.+
T Consensus 72 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~~~-~l~~G~~fGe~~~~~~ 150 (202)
T 3bpz_A 72 KLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEM-KLSDGSYFGEICLLTR 150 (202)
T ss_dssp HHHHTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSCCE-EEETTCEECHHHHHHC
T ss_pred HHHhcCCchhcCCHHHHHHHHHhCCceEECCCCEEEECCCcCCeEEEEeccEEEEEECCCeEE-EEcCCCEeccHHHhcC
Confidence 468889999999999999999999999999999999999999999999999999987777743 6899999999999886
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAK 135 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 135 (150)
.++.++++|.++|.++.||.++|.+++.++|.+...+...+..|+....
T Consensus 151 ---~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~rl~~~~ 199 (202)
T 3bpz_A 151 ---GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIG 199 (202)
T ss_dssp ---SBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHHHHHHHHHHHHHHC-
T ss_pred ---CCcccEEEEeeEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999977776666665765443
No 10
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=99.92 E-value=1.7e-24 Score=148.09 Aligned_cols=130 Identities=26% Similarity=0.432 Sum_probs=114.9
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~ 78 (150)
.++++++++|..++++++..+...++.+.|++|++|+.+|++++.+|||++|.++++ +++|+ ++..+.+|++||+.
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~ 84 (227)
T 3d0s_A 5 DEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGEL 84 (227)
T ss_dssp HHHHTTSSTTSSCCSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCH
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeH
Confidence 457899999999999999999999999999999999999999999999999999995 45676 79999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAK 135 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 135 (150)
+++.+ .++.++++|.++|+++.||.+.|.+++.++|.+...+......++....
T Consensus 85 ~~~~~---~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~ 138 (227)
T 3d0s_A 85 SIFDP---GPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTN 138 (227)
T ss_dssp HHHSC---SCCSSEEEESSCEEEEEEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCC---CCceeEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHH
Confidence 88876 7899999999999999999999999999999965555554444554443
No 11
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=99.92 E-value=6.8e-24 Score=145.46 Aligned_cols=131 Identities=20% Similarity=0.319 Sum_probs=114.5
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~ 78 (150)
.++++++++|..++++++..+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.+|++||+.
T Consensus 5 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 84 (231)
T 3e97_A 5 LDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGET 84 (231)
T ss_dssp HHHHHTSGGGTTCCHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTT
T ss_pred HHHHhcChhhccCCHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeH
Confidence 468999999999999999999999999999999999999999999999999999995 35676 89999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
+++.+ .++.+++.|.++|+++.+|.+.|..++.++|.+...+.....+++.....
T Consensus 85 ~~~~~---~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 139 (231)
T 3e97_A 85 AVLAH---QERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLND 139 (231)
T ss_dssp TTTCC---CCCCEEEEESSCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCC---CCceEEEEECCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 98876 78999999999999999999999999999999655554444445554444
No 12
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=99.91 E-value=2.5e-24 Score=136.61 Aligned_cols=123 Identities=28% Similarity=0.482 Sum_probs=110.7
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|..++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++..+ ...+.+|++||+.+++.+
T Consensus 11 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~---~~~~~~G~~~G~~~~~~~ 87 (138)
T 1vp6_A 11 QLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN---PVELGPGAFFGEMALISG 87 (138)
T ss_dssp HHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS---CEEECTTCEECHHHHHHC
T ss_pred HHHHhChhhhcCCHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC---cceECCCCEeeehHhccC
Confidence 57899999999999999999999999999999999999999999999999999997544 258899999999988876
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLM 132 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~ 132 (150)
.++.++++|.++|.++.||.+.|.+++.++|.+...+.....+|+.
T Consensus 88 ---~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~r~~ 133 (138)
T 1vp6_A 88 ---EPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERRG 133 (138)
T ss_dssp ---CCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_pred ---CCceeEEEECCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHhhc
Confidence 6889999999999999999999999999999977666666554543
No 13
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=99.91 E-value=1.3e-23 Score=144.33 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=115.9
Q ss_pred ccccccccccccCCHHHHHHHHHh--ceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLK--MKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFG 76 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~--~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g 76 (150)
..+++++++|..++++++..+... +..+.|++|++|+.+|++++.+|||++|.++++ +++|+ ++..+.+|++||
T Consensus 17 ~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 17 FDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp HTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred HHHHhcCccccCCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 357899999999999999999998 999999999999999999999999999999995 45666 889999999999
Q ss_pred eeeeeccCCCCc-eeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHhh
Q psy1122 77 EIGILNLDGLNK-RTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKNL 137 (150)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~ 137 (150)
+.+++.+ .+ +.++++|.++|+++.||.+.|.+++.++|.+...+......++......
T Consensus 97 ~~~~~~~---~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~ 155 (232)
T 1zyb_A 97 PQSLFGM---NTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSR 155 (232)
T ss_dssp GGGGSSS---CCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehHHhCC---CCCCceEEEEccceEEEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876 55 8999999999999999999999999999996665555554466554443
No 14
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=99.91 E-value=2.4e-23 Score=142.46 Aligned_cols=131 Identities=19% Similarity=0.293 Sum_probs=104.3
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIG 79 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~ 79 (150)
..++..++|..+++++++.+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++.++.+|++||+..
T Consensus 11 ~~lr~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~ 90 (230)
T 3iwz_A 11 TTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMG 90 (230)
T ss_dssp -----------CCHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGG
T ss_pred hhhhhcchhccCCHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehh
Confidence 57899999999999999999999999999999999999999999999999999995 46677 899999999999999
Q ss_pred eeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhC-----chHHHHHHHHHHHHHHHHHh
Q psy1122 80 ILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDY-----PEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~-----~~~~~~~~~~~~~r~~~~~~ 136 (150)
++.+. .++.+++.|.++|+++.+|.+.|.+++.++ |++...+.....+++.....
T Consensus 91 ~~~~~--~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~l~~~~~ 150 (230)
T 3iwz_A 91 LFIES--DTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTR 150 (230)
T ss_dssp GTSCC--SBCCSEEEESSCEEEEEEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCC--CCceeEEEEcCcEEEEEEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHH
Confidence 98763 478999999999999999999999999999 99555544444435444433
No 15
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=99.91 E-value=6.4e-24 Score=146.11 Aligned_cols=131 Identities=15% Similarity=0.216 Sum_probs=115.9
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~ 78 (150)
.++++++++|..++++++..+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++.++.+|++||+.
T Consensus 10 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~ 89 (237)
T 3fx3_A 10 KAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEA 89 (237)
T ss_dssp HHHHTTSHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHH
T ss_pred HHHHhCCHhhccCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechH
Confidence 357899999999999999999999999999999999999999999999999999995 46777 89999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
.++.+ .++.+++.|.++|+++.+|.+.|..++.++|.+...+......++.....
T Consensus 90 ~~~~~---~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 144 (237)
T 3fx3_A 90 VALRN---TPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVA 144 (237)
T ss_dssp HHHHT---CCCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcC---CCCCceEEECCceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 99876 78999999999999999999999999999999666554444445554443
No 16
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=99.91 E-value=5.2e-24 Score=145.53 Aligned_cols=128 Identities=19% Similarity=0.284 Sum_probs=112.7
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~ 78 (150)
.++++++++|.+++++++..+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.||++||+.
T Consensus 8 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~ 87 (227)
T 3dkw_A 8 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEA 87 (227)
T ss_dssp HHHHTTSTTTSSSCHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCT
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeH
Confidence 357999999999999999999999999999999999999999999999999999995 45566 88999999999999
Q ss_pred eeeccCCCCc-eeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHH
Q psy1122 79 GILNLDGLNK-RTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLME 133 (150)
Q Consensus 79 ~~~~~~~~~~-~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~ 133 (150)
+++.+ .+ +.+++.|.++|+++.+|.+.|..++.++|.+...+......++..
T Consensus 88 ~~~~~---~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~ 140 (227)
T 3dkw_A 88 MMFMD---TPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQ 140 (227)
T ss_dssp TTTTT---CSBCSSCEEESSCCEEEEEESHHHHHHHSSCTHHHHHHHHHHHHHHHH
T ss_pred HhcCC---CCCCceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 98876 56 899999999999999999999999999999655544443334443
No 17
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=99.91 E-value=9.2e-24 Score=134.37 Aligned_cols=114 Identities=23% Similarity=0.342 Sum_probs=102.6
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|..++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++. +|+++..+.+|++||+.+++.+
T Consensus 23 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~g~~~~~~~~G~~fGe~~~l~~ 101 (139)
T 3ocp_A 23 EAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYN 101 (139)
T ss_dssp HHHHHCTTTTTSCHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEE-TTEEEEEECTTCEESCHHHHHC
T ss_pred HHHhcCHhhhcCCHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE-CCEEEEEeCCCCEeccHHHHCC
Confidence 468899999999999999999999999999999999999999999999999999964 6778899999999999998876
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 121 (150)
.++.++++|.++|.++.||.+.|.+++.++|.+.+
T Consensus 102 ---~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~r 136 (139)
T 3ocp_A 102 ---CTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKH 136 (139)
T ss_dssp ---CCCSSEEEESSCEEEEEEEHHHHHHHHTC------
T ss_pred ---CCcceEEEECcceEEEEEcHHHHHHHHhhChHhhh
Confidence 78999999999999999999999999999998653
No 18
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.91 E-value=4.9e-23 Score=139.75 Aligned_cols=118 Identities=22% Similarity=0.451 Sum_probs=107.7
Q ss_pred cccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCC
Q psy1122 6 VGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDG 85 (150)
Q Consensus 6 l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~ 85 (150)
+.++++|.+++++.+..++..++.+.|++|++|+.+|++++.+|||.+|.|+++. +|.++..+.+|++||+.+++.+
T Consensus 77 l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~G~~fGe~~~~~~-- 153 (212)
T 3ukn_A 77 LLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK-DNTVLAILGKGDLIGSDSLTKE-- 153 (212)
T ss_dssp GGGSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEES-SSCEEEEECTTCEEECSCCSSS--
T ss_pred HHhcHHhhcCCHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEEE-CCeEEEEecCCCCcCcHHhccC--
Confidence 4479999999999999999999999999999999999999999999999999985 5678999999999999999976
Q ss_pred CC--ceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHH
Q psy1122 86 LN--KRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLG 127 (150)
Q Consensus 86 ~~--~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~ 127 (150)
. ++.++++|.++|+++.||.++|.+++.++|++...+....
T Consensus 154 -~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l 196 (212)
T 3ukn_A 154 -QVIKTNANVKALTYCDLQYISLKGLREVLRLYPEYAQKFVSEI 196 (212)
T ss_dssp -SCCBBCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHH
T ss_pred -CCCCcceEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHH
Confidence 5 8999999999999999999999999999999555444433
No 19
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=99.90 E-value=5.5e-23 Score=133.37 Aligned_cols=120 Identities=23% Similarity=0.390 Sum_probs=108.1
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeec
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILN 82 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~ 82 (150)
.++++++++|.+++++.+..+...++.+.|++|++|+.+|++++++|||++|.++++. ++.++..+.+|++||+.+++.
T Consensus 26 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fG~~~~~~ 104 (160)
T 4f8a_A 26 RKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ-DDEVVAILGKGDVFGDVFWKE 104 (160)
T ss_dssp HHHHTTCGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEE-TTEEEEEEETTCEEECCTTTC
T ss_pred HHHHHhCHhhhhCCHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE-CCEEEEEecCCCEeCcHHHhc
Confidence 3578899999999999999999999999999999999999999999999999999976 446889999999999998886
Q ss_pred cCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHH
Q psy1122 83 LDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQ 124 (150)
Q Consensus 83 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~ 124 (150)
+.. .++.++++|.++|+++.+|.+.|.+++.++|.+...+.
T Consensus 105 ~~~-~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~ 145 (160)
T 4f8a_A 105 ATL-AQSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSFS 145 (160)
T ss_dssp SSC-CBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHH
T ss_pred Ccc-cceEEEEEECCceEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence 511 37889999999999999999999999999999655543
No 20
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=99.90 E-value=4.4e-23 Score=141.50 Aligned_cols=126 Identities=14% Similarity=0.248 Sum_probs=108.6
Q ss_pred cccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeecc
Q psy1122 8 VVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 8 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~ 83 (150)
.+++|..++++++..+...+..+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.||++||+.+++.+
T Consensus 14 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~ 93 (232)
T 2gau_A 14 LRDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAE 93 (232)
T ss_dssp SHHHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHT
T ss_pred ccHhhhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCC
Confidence 4689999999999999999999999999999999999999999999999996 35666 8999999999999988876
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
.++.++++|.++|+++.||.+.|.+++.++|.+...+.....+++.....
T Consensus 94 ---~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 143 (232)
T 2gau_A 94 ---ETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAER 143 (232)
T ss_dssp ---SCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcceEEEEecceEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999665555554445544433
No 21
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=99.90 E-value=1.7e-23 Score=136.30 Aligned_cols=113 Identities=15% Similarity=0.316 Sum_probs=106.3
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE-ecCCc--EEEEecCCCeeeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI-SESGR--VLTTMKAGDFFGEIGI 80 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~g~--~~~~~~~g~~~g~~~~ 80 (150)
++++++++|.+++++.+..+...++.+.|++|++|+.+|++++++|||++|.++++ ..+|+ ++..+.+|++||+.++
T Consensus 38 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fGe~~~ 117 (161)
T 3idb_B 38 EACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELAL 117 (161)
T ss_dssp HHHTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEECGGGG
T ss_pred HHHhCCHhhhcCCHHHHHHHHHhcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEechHHH
Confidence 47899999999999999999999999999999999999999999999999999996 45666 8899999999999999
Q ss_pred eccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH
Q psy1122 81 LNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
+.+ .++.+++.|.++|.++.||.+.|..++.++|.+
T Consensus 118 ~~~---~~~~~~v~A~~~~~~~~i~~~~~~~l~~~~p~~ 153 (161)
T 3idb_B 118 MYN---TPRAATITATSPGALWGLDRVTFRRIIVKNNAK 153 (161)
T ss_dssp TCC---CCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHT
T ss_pred HcC---CCcccEEEECCCeEEEEEeHHHHHHHHHHCHHH
Confidence 986 789999999999999999999999999999974
No 22
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=99.90 E-value=1.7e-23 Score=135.40 Aligned_cols=114 Identities=17% Similarity=0.317 Sum_probs=106.2
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|..++++.+..+...++.+.|++|++|+.+|++++++|||++|.++++. +|+.+..+.+|++||+.+++.+
T Consensus 38 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fGe~~~~~~ 116 (154)
T 3pna_A 38 KAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYG 116 (154)
T ss_dssp HHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE-TTEEEEEECTTCEECCHHHHHC
T ss_pred HHHHhChhhhhCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE-CCEEEEEecCCCEeeehHhhcC
Confidence 468899999999999999999999999999999999999999999999999999986 6678889999999999999886
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 121 (150)
.++.++++|.++|.++.||.+.|.+++.++|...+
T Consensus 117 ---~~~~~~v~A~~~~~~~~i~~~~~~~ll~~~~~~~~ 151 (154)
T 3pna_A 117 ---TPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKR 151 (154)
T ss_dssp ---CCCSSEEEESSCEEEEEEEHHHHHHHTHHHHHHC-
T ss_pred ---CCcceEEEECcceEEEEEeHHHHHHHHHhChHHHh
Confidence 78899999999999999999999999999987543
No 23
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=99.89 E-value=5e-22 Score=134.18 Aligned_cols=124 Identities=21% Similarity=0.333 Sum_probs=103.9
Q ss_pred cccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCC
Q psy1122 10 TIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDG 85 (150)
Q Consensus 10 ~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~ 85 (150)
.++..+++++++.+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++.++.+|++||+.+++.+.
T Consensus 2 ~l~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~- 80 (210)
T 3ryp_A 2 VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEG- 80 (210)
T ss_dssp -----CCCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTT-
T ss_pred cCCCcCCHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCC-
Confidence 35666999999999999999999999999999999999999999999995 46777 89999999999999998762
Q ss_pred CCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q psy1122 86 LNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAK 135 (150)
Q Consensus 86 ~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 135 (150)
.++.+++.|.++|+++.+|.+.|..++.++|++...+......++....
T Consensus 81 -~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~ 129 (210)
T 3ryp_A 81 -QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTS 129 (210)
T ss_dssp -CBCSSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEEECCcEEEEEEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999999965554444433544433
No 24
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=99.89 E-value=2.4e-22 Score=144.65 Aligned_cols=126 Identities=25% Similarity=0.380 Sum_probs=112.7
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc-EEEEecCCCeeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR-VLTTMKAGDFFGEIG 79 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~-~~~~~~~g~~~g~~~ 79 (150)
.++++++++|..++++++..+...++.+.|++|++|+++|++++++|||++|.++++ +.+|+ ++..+.+|++||+.+
T Consensus 12 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~ 91 (333)
T 4ava_A 12 VEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIA 91 (333)
T ss_dssp HHHHTTSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHH
T ss_pred HHHHhCCHhHhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHH
Confidence 357899999999999999999999999999999999999999999999999999995 35566 889999999999999
Q ss_pred eeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHH
Q psy1122 80 ILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLM 132 (150)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~ 132 (150)
++.+ .++.++++|.++|.++.||.+.|..++ ++|.+...+.....++..
T Consensus 92 l~~~---~~~~~~v~A~~~~~~~~i~~~~~~~l~-~~p~~~~~~~~~~~~~~~ 140 (333)
T 4ava_A 92 LLRD---SPRSATVTTIEPLTGWTGGRGAFATMV-HIPGVGERLLRTARQRLA 140 (333)
T ss_dssp HHHT---CBCSSEEEESSCEEEEEECHHHHHHHH-HSTTHHHHHHHHHHHHHH
T ss_pred hcCC---CCceEEEEEecCEEEEEEcHHHHHHHH-hChHHHHHHHHHHHHHHH
Confidence 8887 789999999999999999999999999 999966555544443544
No 25
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=99.89 E-value=9e-22 Score=132.65 Aligned_cols=117 Identities=23% Similarity=0.379 Sum_probs=101.0
Q ss_pred CCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCCCC---
Q psy1122 15 CQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDGLN--- 87 (150)
Q Consensus 15 l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~~~--- 87 (150)
|+++++..+...++.+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.+|++||+.+++.+ .
T Consensus 1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~---~~~~ 77 (207)
T 2oz6_A 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEK---EGSE 77 (207)
T ss_dssp CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC--------
T ss_pred CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcC---CCCC
Confidence 688999999999999999999999999999999999999999995 46677 8999999999999999876 5
Q ss_pred -ceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q psy1122 88 -KRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEA 134 (150)
Q Consensus 88 -~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~ 134 (150)
++.+++.|.++|+++.+|.+.|.+++.++|.+...+......++...
T Consensus 78 ~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~ 125 (207)
T 2oz6_A 78 QERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKT 125 (207)
T ss_dssp CBCCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEECCcEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999996554443333344443
No 26
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=99.89 E-value=3.2e-22 Score=136.27 Aligned_cols=124 Identities=10% Similarity=0.191 Sum_probs=108.7
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE-ecCCc--EEEEecCCCeeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI-SESGR--VLTTMKAGDFFGEIG 79 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~g~--~~~~~~~g~~~g~~~ 79 (150)
..+++++++|..++++++..+...+..+.|++|++|+.+|++++++|||++|.++++ .++|+ ++..+.||++||+
T Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~-- 80 (220)
T 2fmy_A 3 QMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT-- 80 (220)
T ss_dssp TTCSCSSCHHHHTTSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--
T ss_pred hhhhhcChhhhcCCHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--
Confidence 467999999999999999999999999999999999999999999999999999994 56777 8899999999997
Q ss_pred eeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 80 ILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
++.+++.|.++|+++.+|.+.|.+++.++|++...+.....+++.....
T Consensus 81 --------~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 129 (220)
T 2fmy_A 81 --------HTRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLT 129 (220)
T ss_dssp --------CSSSEEEESSSEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999665555554445544443
No 27
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=99.89 E-value=7.3e-22 Score=136.96 Aligned_cols=128 Identities=11% Similarity=0.069 Sum_probs=108.8
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~ 78 (150)
..++..+..+..++++++..+...+..+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.||++||+
T Consensus 8 ~~~~~~~~p~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~- 86 (250)
T 3e6c_C 8 KDFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGK- 86 (250)
T ss_dssp -CCCCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECC-
T ss_pred hhhhhhccchhhCCHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEee-
Confidence 345666666699999999999999999999999999999999999999999999995 46777 8999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
++.+ . +.++++|.++|+++.+|.+.|..++.++|++...+.....+++.....
T Consensus 87 -~l~~---~-~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~ 139 (250)
T 3e6c_C 87 -LYPT---G-NNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYAR 139 (250)
T ss_dssp -CSCC---S-CCEEEEESSSEEEEEECHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred -ecCC---C-CceEEEEcccEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 5554 6 999999999999999999999999999999655555544445554443
No 28
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=99.88 E-value=4.3e-23 Score=130.81 Aligned_cols=115 Identities=24% Similarity=0.462 Sum_probs=102.8
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE-ecCCc--EEE--EecCCCeeee
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI-SESGR--VLT--TMKAGDFFGE 77 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~g~--~~~--~~~~g~~~g~ 77 (150)
.++++++++|..++++++..+...++.+.|++|++|+.+|++++.+|||++|.++++ .++|+ ++. .+.+|++||+
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~fGe 84 (137)
T 1wgp_A 5 SSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGD 84 (137)
T ss_dssp SCSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBSST
T ss_pred HHHHHcCcchhhCCHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEecH
Confidence 578999999999999999999999999999999999999999999999999999975 45666 444 9999999999
Q ss_pred eee---eccCCCC-----ceeeEEEEcceeEEEEEcHHHHHHHHhhCchH
Q psy1122 78 IGI---LNLDGLN-----KRTADVRSVGYAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 78 ~~~---~~~~~~~-----~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
..+ +.+. . ++.++++|.++|+++.||.+.|.+++.++|.+
T Consensus 85 ~~l~~~~~~~--~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l 132 (137)
T 1wgp_A 85 ELLTWALDPK--SGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRS 132 (137)
T ss_dssp HHHHHHHCSS--CCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHCCC
T ss_pred HHHHHHhccc--cccccccceeEEEEeEEEEEEEECHHHHHHHHHHCHhh
Confidence 985 5541 2 46789999999999999999999999999974
No 29
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=127.87 Aligned_cols=111 Identities=16% Similarity=0.273 Sum_probs=102.9
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeec-CCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeec
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFT-PGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILN 82 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~-~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~ 82 (150)
++++++++|..++++.+..+...++.+.|+ +|++|+.+|++++.+|||++|.++++..+|+. ..+.+|++||+.+++.
T Consensus 16 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~-~~l~~G~~fG~~~~~~ 94 (134)
T 2d93_A 16 EFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKV-ENLFMGNSFGITPTLD 94 (134)
T ss_dssp HHHHHSSTTTSSCHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEECSSSCE-EEECTTCEESCCSSSC
T ss_pred HHHhCCcchhhCCHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCCCcE-EEecCCCccChhHhcC
Confidence 468899999999999999999999999999 99999999999999999999999998877776 6789999999999887
Q ss_pred cCCCCceeeEE-EEcceeEEEEEcHHHHHHHHhhCch
Q psy1122 83 LDGLNKRTADV-RSVGYAELFSLSREDVLSAMKDYPE 118 (150)
Q Consensus 83 ~~~~~~~~~~~-~a~~~~~~~~i~~~~~~~l~~~~~~ 118 (150)
+ .++.+++ .|.++|.++.||.+.|..++.+++.
T Consensus 95 ~---~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~ 128 (134)
T 2d93_A 95 K---QYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEK 128 (134)
T ss_dssp C---EECCSEEEESSSSEEEEEEEHHHHHHHSSCCSS
T ss_pred C---CcceeEEEEEecceEEEEEeHHHHHHHHHHHHh
Confidence 6 6787888 9999999999999999999988775
No 30
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=99.88 E-value=7.1e-22 Score=134.76 Aligned_cols=122 Identities=16% Similarity=0.177 Sum_probs=105.7
Q ss_pred ccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE-ecCCc--EEEEecCCCeeeeeeee
Q psy1122 5 CVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI-SESGR--VLTTMKAGDFFGEIGIL 81 (150)
Q Consensus 5 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~g~--~~~~~~~g~~~g~~~~~ 81 (150)
+++++++|..++++++..+...+..+.|++|++|+.+|++++++|||++|.++++ .++|+ ++..+.||++||
T Consensus 1 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG----- 75 (222)
T 1ft9_A 1 MPPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC----- 75 (222)
T ss_dssp -CCCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE-----
T ss_pred CcccchhhhcCCHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec-----
Confidence 4788999999999999999999999999999999999999999999999999994 56777 889999999999
Q ss_pred ccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 82 NLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 82 ~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
. ++.++++|.++|+++.||.+.|.+++.++|.+...+......++.....
T Consensus 76 -~----~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 125 (222)
T 1ft9_A 76 -M----HSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMR 125 (222)
T ss_dssp -S----CSSCEEEESSCEEEEEECHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred -C----CCCEEEEEccceEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 2 5788999999999999999999999999999555544444435444433
No 31
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=99.88 E-value=3.2e-21 Score=134.63 Aligned_cols=122 Identities=21% Similarity=0.348 Sum_probs=102.5
Q ss_pred ccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCCCCc
Q psy1122 13 QECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDGLNK 88 (150)
Q Consensus 13 ~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~~~~ 88 (150)
..++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++ +++|+ ++.++.+|++||+..++.+. .+
T Consensus 55 ~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~--~~ 132 (260)
T 3kcc_A 55 KPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEG--QE 132 (260)
T ss_dssp ----CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTT--CB
T ss_pred CCCCHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCC--CC
Confidence 55899999999999999999999999999999999999999999996 46777 89999999999999998762 38
Q ss_pred eeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 89 RTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 89 ~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
+.++++|.++|.++.||.+.|.+++.++|++...+......++.....
T Consensus 133 ~~~~~~A~~~~~l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~ 180 (260)
T 3kcc_A 133 RSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSE 180 (260)
T ss_dssp CCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEECCCeEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999655544444435544433
No 32
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.87 E-value=1.2e-21 Score=138.98 Aligned_cols=130 Identities=21% Similarity=0.329 Sum_probs=115.0
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEe---cCCc--EEEEecCCCeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS---ESGR--VLTTMKAGDFFGEI 78 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~~g~--~~~~~~~g~~~g~~ 78 (150)
.+++.+++|..++++.+..+...+..+.|++|++|+.+|++++.+|||++|.++++. .+|+ ++..+.+|++||+.
T Consensus 157 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~ 236 (299)
T 3shr_A 157 EFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEK 236 (299)
T ss_dssp HHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGG
T ss_pred HHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChH
Confidence 467889999999999999999999999999999999999999999999999999964 3455 88999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH-HHHHHHHHHHHHHHHHhh
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA-QEILQNLGRKRLMEAKNL 137 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~-~~~~~~~~~~r~~~~~~~ 137 (150)
+++.+ .++.++++|.++|.++.||.+.|.+++.++|++ ..++..++. |+......
T Consensus 237 ~ll~~---~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~-r~~~~~~~ 292 (299)
T 3shr_A 237 ALQGE---DVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEA-KAKYEAEA 292 (299)
T ss_dssp GGSSS---EECSSEEEESSSEEEEEEEHHHHHHHHTTCCCCCHHHHHHHHH-HHHHHHHH
T ss_pred HHhCC---CCcceEEEECCCEEEEEEeHHHHHHHHccHHHHHHHHHHHHhh-hhhcchhh
Confidence 99876 789999999999999999999999999999994 555555555 66555543
No 33
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=99.87 E-value=1.4e-21 Score=132.65 Aligned_cols=124 Identities=16% Similarity=0.247 Sum_probs=100.9
Q ss_pred ccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccC
Q psy1122 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLD 84 (150)
Q Consensus 9 ~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~ 84 (150)
-|.|...++..+..+...+..+.|++|++|+.+|++++++|||++|.++++ +++|+ ++..+.+|++||+..++.+.
T Consensus 4 ~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~ 83 (213)
T 1o5l_A 4 DKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSE 83 (213)
T ss_dssp ---------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSS
T ss_pred cccchhhccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCC
Confidence 367888999999999999999999999999999999999999999999995 46777 88999999999999988752
Q ss_pred CCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHH-HHHHHHHHHHHHHHH
Q psy1122 85 GLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQ-EILQNLGRKRLMEAK 135 (150)
Q Consensus 85 ~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~-~~~~~~~~~r~~~~~ 135 (150)
.++.+++.|.++|+++.+|.+.|.+++.++|.+. .+++.++. ++....
T Consensus 84 --~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~-~~~~~~ 132 (213)
T 1o5l_A 84 --PRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLLFFLKDVSE-HFRVVS 132 (213)
T ss_dssp --CBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH-HHHHHH
T ss_pred --CCceEEEEEccceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHH-HHHHHH
Confidence 3899999999999999999999999999999965 55555554 444433
No 34
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.1e-21 Score=135.32 Aligned_cols=114 Identities=13% Similarity=0.237 Sum_probs=106.4
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|.+++++.+..+...++.+.|++|++|+.+|++++.+|||++|.++++. +|+.+..+.+|++||+.+++.+
T Consensus 7 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~-~~~~~~~~~~g~~fGe~~l~~~ 85 (246)
T 3of1_A 7 KSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV-NDNKVNSSGPGSSFGELALMYN 85 (246)
T ss_dssp HHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEES-TTSCCEEECTTCEECHHHHHHT
T ss_pred HHHhcCHhhHhCCHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEE-CCEEEEecCCCCeeehhHHhcC
Confidence 578999999999999999999999999999999999999999999999999999985 5666789999999999999886
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 121 (150)
.++.+++.|.++|.++.+|.+.|..++.++|....
T Consensus 86 ---~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~ 120 (246)
T 3of1_A 86 ---SPRAATVVATSDCLLWALDRLTFRKILLGSSFKKR 120 (246)
T ss_dssp ---CCCSSEEEESSCEEEEEEEHHHHHHTTTTTTSHHH
T ss_pred ---CCCCcEEEECCCeEEEEEEhHHHHHHHHHhHHHHH
Confidence 79999999999999999999999999999997443
No 35
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.86 E-value=4.4e-21 Score=135.55 Aligned_cols=114 Identities=17% Similarity=0.317 Sum_probs=107.0
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|..++++.+..+...+..+.|++|++|+.+|++++.+|||++|.++++. +|..+..+.+|++||+.+++.+
T Consensus 39 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~g~~~~~l~~G~~fGe~~l~~~ 117 (291)
T 2qcs_B 39 KAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYG 117 (291)
T ss_dssp HHTTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEE-TTEEEEEECTTCEECGGGGTCC
T ss_pred HHHhcChhhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE-CCeEEEEcCCCCccchHHHhcC
Confidence 468899999999999999999999999999999999999999999999999999986 6788999999999999998876
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 121 (150)
.++.+++.|.++|.++.||.+.|..++..+|.+..
T Consensus 118 ---~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~ 152 (291)
T 2qcs_B 118 ---TPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKR 152 (291)
T ss_dssp ---CBCSSEEEESSCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEECCCEEEEEEEhHHHHHHHhhhHHHHH
Confidence 78999999999999999999999999999998543
No 36
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.85 E-value=1.1e-20 Score=134.04 Aligned_cols=112 Identities=23% Similarity=0.342 Sum_probs=105.5
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
++++++++|..++++++..+...+..+.|++|++|+.+|++++.+|||++|.++++. +|.++..+.+|++||+.+++.+
T Consensus 39 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-~g~~~~~~~~G~~fGe~~ll~~ 117 (299)
T 3shr_A 39 EAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYN 117 (299)
T ss_dssp HHHHTCTTTTTSCHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEEE-TTEEEEEECTTCEESCSGGGTT
T ss_pred HHHhhCHHHHcCCHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEEE-CCEEEEEeCCCCeeeHhHHhcC
Confidence 468899999999999999999999999999999999999999999999999999964 6688899999999999998877
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
.++.+++.|.++|.++.||.+.|..++.++|..
T Consensus 118 ---~~~~~tv~a~~~~~l~~i~~~~~~~i~~~~~~~ 150 (299)
T 3shr_A 118 ---CTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLI 150 (299)
T ss_dssp ---TBCCSEEEESSCEEEEEECHHHHHHHHHHHHHH
T ss_pred ---CCCCcEEEEcCCeEEEEEcHHHHHHHhhHhHHH
Confidence 899999999999999999999999999999873
No 37
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=99.84 E-value=1.3e-19 Score=124.81 Aligned_cols=120 Identities=15% Similarity=0.173 Sum_probs=97.6
Q ss_pred ccCCHHHHHHHHH--hceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCCC
Q psy1122 13 QECQPEFLHDLVL--KMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDGL 86 (150)
Q Consensus 13 ~~l~~~~~~~l~~--~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~~ 86 (150)
++++++++..++. .+..+.|++|++|+.+|++++++|||++|.++++ +++|+ ++.++ +|++||+..++.+
T Consensus 2 ~~l~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~--- 77 (238)
T 2bgc_A 2 SNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDT--- 77 (238)
T ss_dssp --CHHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTT---
T ss_pred CCCCHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcC---
Confidence 4688999999985 5899999999999999999999999999999995 46777 77788 9999999998876
Q ss_pred Cc--eeeEEEEc-ceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHHh
Q psy1122 87 NK--RTADVRSV-GYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAKN 136 (150)
Q Consensus 87 ~~--~~~~~~a~-~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 136 (150)
.+ +.+++.|. ++|+++.||.+.|..++.++|.+...+......++.....
T Consensus 78 ~~~~~~~~~~a~~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 130 (238)
T 2bgc_A 78 ETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLA 130 (238)
T ss_dssp CCBSCCCEEEECSSEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcceeEEEEEcceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 43 36777777 5999999999999999999999655544444435544433
No 38
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.3e-20 Score=129.82 Aligned_cols=114 Identities=19% Similarity=0.347 Sum_probs=106.0
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
.+++.+++|..+++..+..+...+..+.|++|++|+.+|++++.+|||.+|.++++..+...+..+.+|++||+.+++.+
T Consensus 125 ~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~fGe~~~~~~ 204 (246)
T 3of1_A 125 DLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLND 204 (246)
T ss_dssp HHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTEEEEEEETTCEECHHHHHHT
T ss_pred HHHhhChhhhcCCHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCceEEEcCCCCcccHHHHhCC
Confidence 45778899999999999999999999999999999999999999999999999998665558899999999999999886
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQ 120 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~ 120 (150)
.++.+++.|.++|+++.||.+.|.+++..+|++.
T Consensus 205 ---~~~~~~v~a~~~~~~~~i~~~~f~~ll~~~~~~~ 238 (246)
T 3of1_A 205 ---LPRQATVTATKRTKVATLGKSGFQRLLGPAVDVL 238 (246)
T ss_dssp ---CBCSSEEEESSCEEEEEEEHHHHHHHCTTHHHHH
T ss_pred ---CCcccEEEECCCEEEEEEeHHHHHHHhccHHHHH
Confidence 7999999999999999999999999999988743
No 39
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.84 E-value=8.2e-21 Score=139.23 Aligned_cols=114 Identities=16% Similarity=0.313 Sum_probs=107.1
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
+++++.++|.+|+++.+..++..+..+.|++|++|+.+|++++++|||++|.++++. +|+.+..+.+|++||+.+++.+
T Consensus 130 ~~l~~~~lF~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~-~~~~v~~l~~G~~fGe~all~~ 208 (381)
T 4din_B 130 KAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV-NGEWVTNISEGGSFGELALIYG 208 (381)
T ss_dssp HHHTTCTTSSSCCHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE-TTEEEEEEESSCCBCGGGGTSC
T ss_pred HHHhCChhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE-CCeEeeeCCCCCEEEchHHhcC
Confidence 468899999999999999999999999999999999999999999999999999985 6678889999999999999987
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQE 121 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 121 (150)
.++.+++.|.++|.+|.||.+.|..++.++|....
T Consensus 209 ---~~r~atv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 243 (381)
T 4din_B 209 ---TPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKR 243 (381)
T ss_dssp ---CBCSSEEEESSSCEEEEEEHHHHHHHHHHHHHHHH
T ss_pred ---CCcceEEEECCCEEEEEEchHHHHHhhhhhhHHHH
Confidence 79999999999999999999999999999998543
No 40
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.83 E-value=3.9e-20 Score=137.02 Aligned_cols=114 Identities=14% Similarity=0.312 Sum_probs=106.1
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE-ecCCc--EEEEecCCCeeeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI-SESGR--VLTTMKAGDFFGEIGI 80 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~g~--~~~~~~~g~~~g~~~~ 80 (150)
++++++++|.+|+++.+..++..+..+.|++|++|+.+|++++.+|||++|.++++ ..+|+ ++..+.+|++||+.++
T Consensus 145 ~~L~~~~lF~~L~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~al 224 (416)
T 3tnp_B 145 EACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELAL 224 (416)
T ss_dssp HHHTTSHHHHTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGG
T ss_pred HHHhCCHhHhcCCHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHH
Confidence 46889999999999999999999999999999999999999999999999999995 45666 7899999999999999
Q ss_pred eccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHH
Q psy1122 81 LNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQ 120 (150)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~ 120 (150)
+.+ .++.++++|.++|.+|.||++.|..++..+|...
T Consensus 225 l~~---~pr~atv~A~~d~~l~~i~r~~f~~ll~~~~~~~ 261 (416)
T 3tnp_B 225 MYN---TPKAATITATSPGALWGLDRVTFRRIIVKNNAKK 261 (416)
T ss_dssp TSC---CCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred hcC---CCcccEEEEccCeEEEEEeehhhhhhhhcchhHH
Confidence 987 7899999999999999999999999999888743
No 41
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=99.83 E-value=1.7e-19 Score=124.68 Aligned_cols=118 Identities=18% Similarity=0.304 Sum_probs=97.5
Q ss_pred HHHHHHHHHhce---EEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCCCCce
Q psy1122 17 PEFLHDLVLKMK---AYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDGLNKR 89 (150)
Q Consensus 17 ~~~~~~l~~~~~---~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~~~~~ 89 (150)
++.++.+..... .+.|++|++|+.+|++++.+|||++|.++++ +++|+ ++.++.||++||+.+++.+.. .++
T Consensus 30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~-~~~ 108 (243)
T 3la7_A 30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNK-SDR 108 (243)
T ss_dssp HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCC-SBC
T ss_pred HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCC-Ccc
Confidence 567777777777 9999999999999999999999999999995 46777 899999999999998887520 134
Q ss_pred eeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q psy1122 90 TADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEAK 135 (150)
Q Consensus 90 ~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 135 (150)
.++++|.++|+++.+|.+.|.+++.++|++...+......++....
T Consensus 109 ~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~ 154 (243)
T 3la7_A 109 FYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTE 154 (243)
T ss_dssp CEEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEccceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999965555444444554443
No 42
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.83 E-value=4.6e-20 Score=136.64 Aligned_cols=129 Identities=13% Similarity=0.259 Sum_probs=106.2
Q ss_pred ccccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEe--cC------Cc--EEEEecCC
Q psy1122 3 VVCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ES------GR--VLTTMKAG 72 (150)
Q Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~------g~--~~~~~~~g 72 (150)
..+++++++|..++.+.+..+...+..+.|++|++|+.+|++++.+|||++|.++++. .+ |+ ++..+.+|
T Consensus 266 ~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G 345 (416)
T 3tnp_B 266 ESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRG 345 (416)
T ss_dssp SSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTT
T ss_pred HHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCC
Confidence 4678999999999999999999999999999999999999999999999999999963 22 54 89999999
Q ss_pred CeeeeeeeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q psy1122 73 DFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEA 134 (150)
Q Consensus 73 ~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~ 134 (150)
++||+.+++.+ .++.++++|.++|.++.|+.+.|..++..+|++.........+++...
T Consensus 346 ~~fGE~all~~---~~r~~tv~A~~~~~ll~I~~~~f~~ll~~~p~i~~~~~~~~~~~L~~~ 404 (416)
T 3tnp_B 346 QYFGELALVTN---KPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVAL 404 (416)
T ss_dssp CEESGGGGTCC---SCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTCC-----------
T ss_pred CEecHHHHhCC---CCceeEEEEcCCeEEEEEEHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99999999976 789999999999999999999999999999995444333333354443
No 43
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.82 E-value=1.2e-19 Score=128.21 Aligned_cols=113 Identities=21% Similarity=0.306 Sum_probs=104.2
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEe--cCC-c--EEEEecCCCeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ESG-R--VLTTMKAGDFFGEI 78 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~g-~--~~~~~~~g~~~g~~ 78 (150)
.+++++++|..++...+..+...+..+.|++|++|+.+|++++.+|||++|.++++. ++| + .+..+.+|++||+.
T Consensus 157 ~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fGe~ 236 (291)
T 2qcs_B 157 EFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEI 236 (291)
T ss_dssp HHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEECSG
T ss_pred HHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEecHH
Confidence 356788999999999999999999999999999999999999999999999999963 344 2 79999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
+++.+ .++.++++|.++|.++.||.+.|..++..+|++
T Consensus 237 ~ll~~---~~~~~tv~a~~~~~~~~i~~~~f~~~l~~~p~~ 274 (291)
T 2qcs_B 237 ALLMN---RPKAATVVARGPLKCVKLDRPRFERVLGPCSDI 274 (291)
T ss_dssp GGTCC---CCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHH
T ss_pred HHcCC---CCcceEEEECCcEEEEEEcHHHHHHHhccHHHH
Confidence 99986 789999999999999999999999999999983
No 44
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.81 E-value=2.3e-19 Score=134.37 Aligned_cols=122 Identities=17% Similarity=0.246 Sum_probs=104.3
Q ss_pred cccccccccccCCHHHHHHHHHhceE-EeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeec
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKA-YIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILN 82 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~-~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~ 82 (150)
++++++++|..++++.+..+...+.. +.|++|++|+.+|++++.+|||++|.++++..+..++..+.+|++||+.+++.
T Consensus 337 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~fGe~~ll~ 416 (469)
T 1o7f_A 337 DELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVN 416 (469)
T ss_dssp HHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCEECGGGGTC
T ss_pred HHHhcCHhhhhCCHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCEEEEehhhc
Confidence 46788999999999999999999985 59999999999999999999999999999864434899999999999999998
Q ss_pred cCCCCceeeEEEEcc-eeEEEEEcHHHHHHHHhhCchHHHHHHHHHH
Q psy1122 83 LDGLNKRTADVRSVG-YAELFSLSREDVLSAMKDYPEAQEILQNLGR 128 (150)
Q Consensus 83 ~~~~~~~~~~~~a~~-~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 128 (150)
+ .++.+++.|.+ +|+++.||.+.|..++.++|.+...+.....
T Consensus 417 ~---~~~~~tv~a~~~~~~~~~i~~~~f~~ll~~~p~~~~~l~e~~~ 460 (469)
T 1o7f_A 417 D---APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 460 (469)
T ss_dssp C---SCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTCC---------
T ss_pred C---CCceEEEEEecCCEEEEEEcHHHHHHHHHHChHHHHHHHhcCc
Confidence 6 78999999998 6999999999999999999996555555444
No 45
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.80 E-value=4.7e-19 Score=132.69 Aligned_cols=112 Identities=22% Similarity=0.343 Sum_probs=103.7
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCC----cEEEEecCCCeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESG----RVLTTMKAGDFFGE 77 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g----~~~~~~~~g~~~g~ 77 (150)
++++++++|.+++++++..+...+..+.|++|++|+.+|++++.+|||++|.++++ ..+| .++..+.+|++||+
T Consensus 42 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 42 TRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp HHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred HHHhCCHhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 46889999999999999999999999999999999999999999999999999995 3455 38999999999999
Q ss_pred eeeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH
Q psy1122 78 IGILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 78 ~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
.+ +.+ .++.+++.|.++|.++.||.+.|..++.++|.+
T Consensus 122 ~~-l~~---~~~~~tv~A~~~~~l~~i~~~~~~~l~~~~p~~ 159 (469)
T 1o7f_A 122 SI-LDN---TPRHATIVTRESSELLRIEQEDFKALWEKYRQY 159 (469)
T ss_dssp GG-GGT---CBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGG
T ss_pred hh-hCC---CCccceEEEccceeEEEEcHHHHHHHHHhCHHH
Confidence 98 766 789999999999999999999999999999873
No 46
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.79 E-value=1.8e-19 Score=132.08 Aligned_cols=117 Identities=21% Similarity=0.316 Sum_probs=106.1
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEe--cCCc---EEEEecCCCeeeee
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ESGR---VLTTMKAGDFFGEI 78 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~g~---~~~~~~~g~~~g~~ 78 (150)
.+++++++|..++...+..+...+..+.|++|++|+.+|++++.+|||.+|.++++. .+|+ .+..+.+|++||+.
T Consensus 248 ~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~ 327 (381)
T 4din_B 248 EFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEI 327 (381)
T ss_dssp HHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTT
T ss_pred HHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechH
Confidence 467889999999999999999999999999999999999999999999999999964 2333 68999999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH-HHHH
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA-QEIL 123 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~-~~~~ 123 (150)
+++.+ .++.++++|.++|.++.|+.+.|..++..+|++ .+.+
T Consensus 328 all~~---~~r~~tv~A~~~~~ll~i~~~~f~~ll~~~~~i~~~~~ 370 (381)
T 4din_B 328 ALLLN---RPRAATVVARGPLKCVKLDRPRFERVLGPCSEILKRNI 370 (381)
T ss_dssp GGGSC---CBCSSEEEESSCBEEEEEEHHHHHHHHCCHHHHHHTTH
T ss_pred HHhCC---CCceeEEEEcCCEEEEEEeHHHHHHHHhhhHHHHHHHH
Confidence 99987 799999999999999999999999999999984 4333
No 47
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.79 E-value=7e-21 Score=138.40 Aligned_cols=125 Identities=29% Similarity=0.481 Sum_probs=0.5
Q ss_pred cccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeecc
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNL 83 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~ 83 (150)
+.+++.++|+++++++++.+...++.+.|+||++|+++|++++++|||.+|.++++..+ ...+.+|++||+.+++.+
T Consensus 228 ~~l~~~~lf~~ls~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~---~~~l~~G~~fGe~~~l~~ 304 (355)
T 3beh_A 228 QLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN---PVELGPGAFFGEMALISG 304 (355)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhhhcccccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEEECC---eeEECCCCEEeehHHhCC
Confidence 56889999999999999999999999999999999999999999999999999997544 358999999999998876
Q ss_pred CCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q psy1122 84 DGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEAQEILQNLGRKRLMEA 134 (150)
Q Consensus 84 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~ 134 (150)
.++.++++|.++|+++.+|.++|.++++++|++...+.....+|+...
T Consensus 305 ---~~~~~~~~A~~~~~l~~i~~~~f~~ll~~~p~~~~~l~~~l~~rl~~~ 352 (355)
T 3beh_A 305 ---EPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGAA 352 (355)
T ss_dssp ---------------------------------------------------
T ss_pred ---CCcceEEEECccEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Confidence 788999999999999999999999999999997777666666566543
No 48
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=99.76 E-value=3e-18 Score=133.70 Aligned_cols=113 Identities=18% Similarity=0.267 Sum_probs=104.2
Q ss_pred cccccccccccCCHHHHHHHHHhce-EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeec
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMK-AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILN 82 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~-~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~ 82 (150)
++++++++|.+++++++..+...+. .+.|++|++|+.+|++++.+|||++|.++++..+..++..+.+|++||+.+++.
T Consensus 32 ~~L~~~~lF~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~fGe~al~~ 111 (694)
T 3cf6_E 32 DELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVN 111 (694)
T ss_dssp HHHTTCGGGTTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEECHHHHHH
T ss_pred HHHHcChhhccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEeehHHHhC
Confidence 4688999999999999999999998 789999999999999999999999999999865334899999999999999887
Q ss_pred cCCCCceeeEEEEcc-eeEEEEEcHHHHHHHHhhCchH
Q psy1122 83 LDGLNKRTADVRSVG-YAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 83 ~~~~~~~~~~~~a~~-~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
+ .++.++++|.+ +|+++.||.+.|.+++.++|.+
T Consensus 112 ~---~~~~~tv~A~edd~~ll~I~~~~f~~ll~~~p~l 146 (694)
T 3cf6_E 112 D---APRAASIVLREDNCHFLRVDKEDFNRILRDVEAN 146 (694)
T ss_dssp T---CBCSSEEEECSSSEEEEEEEHHHHHHHTTTTCCC
T ss_pred C---CCceEEEEEeeCceEEEEEeHHHHHHHHHHCHHH
Confidence 6 78999999999 5999999999999999999984
No 49
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=99.74 E-value=1.4e-17 Score=111.40 Aligned_cols=97 Identities=22% Similarity=0.326 Sum_probs=80.4
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEE
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSL 104 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i 104 (150)
++.|++|++|+.+|++++.+|||++|.++++ +++|+ ++..+.||++||+ +++.+ .++.+++.|.++|+++.+
T Consensus 1 i~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge-~~~~~---~~~~~~~~A~~~~~v~~i 76 (195)
T 3b02_A 1 MKRFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE-EALEG---KAYRYTAEAMTEAVVQGL 76 (195)
T ss_dssp CEEECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG-GGGTC---SBCSSEEEESSSEEEEEE
T ss_pred CeEcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech-hhhCC---CCceeEEEECCcEEEEEE
Confidence 4689999999999999999999999999995 45676 8999999999999 88876 789999999999999999
Q ss_pred cHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q psy1122 105 SREDVLSAMKDYPEAQEILQNLGRKRLMEAK 135 (150)
Q Consensus 105 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 135 (150)
|.+.|. |.+...+......++....
T Consensus 77 ~~~~~~------p~~~~~~~~~l~~~l~~~~ 101 (195)
T 3b02_A 77 EPRAMD------HEALHRVARNLARQMRRVQ 101 (195)
T ss_dssp CGGGCC------HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHcC------HHHHHHHHHHHHHHHHHHH
Confidence 999998 7754444333333444443
No 50
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.73 E-value=3.6e-17 Score=132.28 Aligned_cols=111 Identities=23% Similarity=0.371 Sum_probs=100.9
Q ss_pred ccccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEe--cC--C--cEEEEecCCCeeeee
Q psy1122 5 CVGVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVIS--ES--G--RVLTTMKAGDFFGEI 78 (150)
Q Consensus 5 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~--g--~~~~~~~~g~~~g~~ 78 (150)
.|+.+++|+++++..+..|+.++....|++|++||++||+++++|+|++|.|.++- .+ + ..+..+.+|+.||+
T Consensus 43 ~Lk~~~~f~~l~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFGE- 121 (999)
T 4f7z_A 43 RLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE- 121 (999)
T ss_dssp HHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEECG-
T ss_pred HHhCCHhhhcCCHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchhh-
Confidence 57889999999999999999999999999999999999999999999999999952 12 2 27899999999999
Q ss_pred eeeccCCCCceeeEEEEcceeEEEEEcHHHHHHHHhhCchH
Q psy1122 79 GILNLDGLNKRTADVRSVGYAELFSLSREDVLSAMKDYPEA 119 (150)
Q Consensus 79 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 119 (150)
.++.+ .++.++++|.++|++|.+|+++|..++.++|+.
T Consensus 122 all~n---~pRtaTv~a~~~s~l~~l~r~~F~~i~~~~~e~ 159 (999)
T 4f7z_A 122 SILDN---TPRHATIVTRESSELLRIEQEDFKALWEKYRQY 159 (999)
T ss_dssp GGGGT---CCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHH
T ss_pred hhccC---CCcceEEEeccceEEEEEEHHHHHHHHHhChHH
Confidence 66665 789999999999999999999999999988873
No 51
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=99.68 E-value=1.2e-16 Score=107.24 Aligned_cols=82 Identities=23% Similarity=0.329 Sum_probs=71.1
Q ss_pred HHhceEEeecCCceEEecCCcc--ceeEEEeeceEEEE--ecCCc--EEEEecCCCeeeeeeeeccCCCCceeeEEEEcc
Q psy1122 24 VLKMKAYIFTPGDLICRKGEVA--REMFIIADGILEVI--SESGR--VLTTMKAGDFFGEIGILNLDGLNKRTADVRSVG 97 (150)
Q Consensus 24 ~~~~~~~~~~~g~~i~~~g~~~--~~~y~i~~G~v~~~--~~~g~--~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~ 97 (150)
.+.++.+.|++|++|+.+|+++ +++|||++|.++++ +++|+ ++..+.||++||+ +++.+ .++.+++.|.+
T Consensus 2 ~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~-~~l~~---~~~~~~~~A~~ 77 (202)
T 2zcw_A 2 TQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGE-EALFG---QERIYFAEAAT 77 (202)
T ss_dssp ----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECT-HHHHT---CCBCSEEEESS
T ss_pred CccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeee-hhcCC---CCcceEEEEcc
Confidence 4567889999999999999999 99999999999995 46776 7899999999999 77765 78999999999
Q ss_pred eeEEEEEcHHHHH
Q psy1122 98 YAELFSLSREDVL 110 (150)
Q Consensus 98 ~~~~~~i~~~~~~ 110 (150)
+|.++.+ .+.|.
T Consensus 78 ~~~v~~i-~~~~~ 89 (202)
T 2zcw_A 78 DVRLEPL-PENPD 89 (202)
T ss_dssp CEEEEEC-CSSCC
T ss_pred cEEEEEE-hHhcC
Confidence 9999999 87775
No 52
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.68 E-value=4.3e-16 Score=126.04 Aligned_cols=109 Identities=18% Similarity=0.259 Sum_probs=98.7
Q ss_pred cccccccccccCCHHHHHHHHHhceEEe-ecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeec
Q psy1122 4 VCVGVVTIFQECQPEFLHDLVLKMKAYI-FTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILN 82 (150)
Q Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~-~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~ 82 (150)
+++.+++.|++|+...+..++..+.... +++|++|+++||..+.+|||++|.|.++......+..+.+|++||+.+++.
T Consensus 337 e~L~~i~~f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~~~~~~v~~L~~Gd~FGElALL~ 416 (999)
T 4f7z_A 337 DELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVN 416 (999)
T ss_dssp HHHTTCGGGTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEECGGGGTC
T ss_pred HHHHhhHHHhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEEcCCcceEEecCCCcccchhhcc
Confidence 4688899999999999999999998665 578999999999999999999999999865545789999999999999998
Q ss_pred cCCCCceeeEEEEcce-eEEEEEcHHHHHHHHhh
Q psy1122 83 LDGLNKRTADVRSVGY-AELFSLSREDVLSAMKD 115 (150)
Q Consensus 83 ~~~~~~~~~~~~a~~~-~~~~~i~~~~~~~l~~~ 115 (150)
+ .|+.++++|.++ |+++++++++|..++.+
T Consensus 417 ~---~PR~aTV~a~~d~c~fl~i~k~df~~il~~ 447 (999)
T 4f7z_A 417 D---APRAASIVLREDNCHFLRVDKEDGNRILRD 447 (999)
T ss_dssp S---CBCSSEEEESSSSEEEEEEEHHHHHHHHHH
T ss_pred C---CCeeEEEEEecCceEEEEeeHHHHHHHHhH
Confidence 7 899999999985 99999999999998865
No 53
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=95.88 E-value=0.13 Score=34.56 Aligned_cols=68 Identities=13% Similarity=0.285 Sum_probs=52.4
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEE
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSL 104 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i 104 (150)
+....+++|+.+-....+.+.+.+|++|.+.+.-. |+ ...+.+|+++ .+. ...++.+.|.+++.++.+
T Consensus 39 ~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~-~~-~~~l~~Gd~~----~~p----~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 39 ISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIE-NN-KKTISNGDFL----EIT----ANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEEECTTCEEEECSCSSCEEEEEEESEEEEEES-SC-EEEEETTEEE----EEC----SSCCEEEEESSSEEEEEE
T ss_pred EEEEEECCCCccCccccCCCEEEEEEeCEEEEEEC-CE-EEEECCCCEE----EEC----CCCCEEEEECCCcEEEEE
Confidence 45668999999988778889999999999999643 33 2678898844 233 345677788999999877
No 54
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=95.05 E-value=0.23 Score=29.25 Aligned_cols=66 Identities=9% Similarity=0.254 Sum_probs=41.0
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEE
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSL 104 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i 104 (150)
...+++|..+-....+...+++|++|.+.+.- +|+ ...+.+|+++- +.. ..++++.+.+++.++.+
T Consensus 42 ~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i-~~~-~~~l~~Gd~i~----i~~----~~~H~~~~~~~~~~~~i 107 (114)
T 2ozj_A 42 LFSFADGESVSEEEYFGDTLYLILQGEAVITF-DDQ-KIDLVPEDVLM----VPA----HKIHAIAGKGRFKMLQI 107 (114)
T ss_dssp EEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE-TTE-EEEECTTCEEE----ECT----TCCBEEEEEEEEEEEEE
T ss_pred EEEECCCCccccEECCCCeEEEEEeCEEEEEE-CCE-EEEecCCCEEE----ECC----CCcEEEEeCCCcEEEEE
Confidence 34467776654444556789999999999864 333 46789998553 322 22333444567666554
No 55
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=94.40 E-value=0.41 Score=28.35 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=44.8
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEE
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFS 103 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~ 103 (150)
....+++|..+-..-.+...+++|++|.+.+.-. |+ ...+.+|+.+- +. ....+++.+.+++.++.
T Consensus 39 ~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~-~~-~~~l~~Gd~i~----ip----~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVD-GA-QRRLHQGDLLY----LG----AGAAHDVNAITNTSLLV 104 (114)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEESCEEEEET-TE-EEEECTTEEEE----EC----TTCCEEEEESSSEEEEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEECEEEEEEC-CE-EEEECCCCEEE----EC----CCCcEEEEeCCCcEEEE
Confidence 4567889988766566667999999999998643 33 46789988543 32 23445556667765443
No 56
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=94.38 E-value=0.16 Score=29.13 Aligned_cols=48 Identities=17% Similarity=0.268 Sum_probs=32.7
Q ss_pred eEEeecCCceEEecCCccc-eeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEVAR-EMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~-~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|...-....+.. .+++|++|.+.+...+|.....+.+|+.+
T Consensus 21 ~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~ 69 (97)
T 2fqp_A 21 TEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSY 69 (97)
T ss_dssp EEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCE
T ss_pred EEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEE
Confidence 4567788876522222333 59999999999876555235689999876
No 57
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=93.65 E-value=0.24 Score=31.73 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=48.6
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEE------
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELF------ 102 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~------ 102 (150)
...+++|..+-..-.....+++|++|.+.+.- +|+ ...+.+|+++- +..+ .+.......-+++.++
T Consensus 57 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v-~g~-~~~l~~GD~i~----ip~g--~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 57 YFEVGPGGHSTLERHQHAHGVMILKGRGHAMV-GRA-VSAVAPYDLVT----IPGW--SWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEECEEEEE-TTE-EEEECTTCEEE----ECTT--CCEEEECCTTSCEEEEEEEESS
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEE-CCE-EEEeCCCCEEE----ECCC--CcEEeEeCCCCCEEEEEEEccC
Confidence 44566776554333445678999999999864 333 46788888653 1110 1111111112222222
Q ss_pred ----EEcHHHHHHHHhhCchHHHHHHH
Q psy1122 103 ----SLSREDVLSAMKDYPEAQEILQN 125 (150)
Q Consensus 103 ----~i~~~~~~~l~~~~~~~~~~~~~ 125 (150)
.+|......-+..+|.+..+++.
T Consensus 129 ~d~p~~p~~~~l~~l~~~~~~~~~~~~ 155 (166)
T 3jzv_A 129 RDKPQLPTEADLAMLRADDAVAAFLDG 155 (166)
T ss_dssp CCCCBCCCHHHHHHHHTSHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHhCcchhhhhcc
Confidence 23455556666777777766654
No 58
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=93.55 E-value=0.2 Score=32.41 Aligned_cols=50 Identities=16% Similarity=0.299 Sum_probs=37.1
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCcEEEEecCCCeee
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGRVLTTMKAGDFFG 76 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~~~~~~~~g~~~g 76 (150)
+....+++|...-......+.+++|++|.+.+. +++|.....+.+||++-
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~ 94 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIK 94 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEE
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEE
Confidence 456688999877555334579999999999883 45555667899999763
No 59
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=93.39 E-value=0.3 Score=31.26 Aligned_cols=46 Identities=15% Similarity=0.309 Sum_probs=32.2
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|..+-..-.+...+++|++|.+.+.-. |+ ...+.+|+++
T Consensus 59 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~-~~-~~~l~~Gd~i 104 (167)
T 3ibm_A 59 RYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLD-DR-VEPLTPLDCV 104 (167)
T ss_dssp EEEEECTTCBCCCBBCSSCEEEEEEESEEEEEET-TE-EEEECTTCEE
T ss_pred EEEEECCCCCCCCccCCCcEEEEEEeCEEEEEEC-CE-EEEECCCCEE
Confidence 3456777766544444578899999999998643 33 4678888865
No 60
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=93.13 E-value=0.39 Score=31.04 Aligned_cols=48 Identities=17% Similarity=0.261 Sum_probs=33.3
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
+....+++|...-.-......+++|++|.+.+.-.+|+ ...+.+||.+
T Consensus 81 ~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~ge-~~~L~~GDsi 128 (172)
T 3es1_A 81 IRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGA-KRTVRQGGII 128 (172)
T ss_dssp EEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGGC-EEEECTTCEE
T ss_pred EEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCCe-EEEECCCCEE
Confidence 45567888865433334445688999999998644344 3679999986
No 61
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=92.97 E-value=0.25 Score=31.34 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=30.2
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
...+++|...-..-.+...+++|++|.+.+.- +|+ ...+.+|+++
T Consensus 48 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v-~g~-~~~l~~Gd~i 92 (156)
T 3kgz_A 48 YFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV-GET-ISDVAQGDLV 92 (156)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE-TTE-EEEEETTCEE
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEE-CCE-EEEeCCCCEE
Confidence 44566666553333445678999999999864 333 4678888865
No 62
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=92.87 E-value=0.26 Score=29.69 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=34.2
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
+....+|..-+.. +..+.+++|++|.+.+..++|. ...+.+||.+-
T Consensus 46 vWe~tPG~~~~~~-~~~~E~~~iLeG~~~lt~ddG~-~~~l~aGD~~~ 91 (116)
T 3es4_A 46 VWMAEPGIYNYAG-RDLEETFVVVEGEALYSQADAD-PVKIGPGSIVS 91 (116)
T ss_dssp EEEECSEEEEECC-CSEEEEEEEEECCEEEEETTCC-CEEECTTEEEE
T ss_pred EEecCCceeECee-CCCcEEEEEEEeEEEEEeCCCe-EEEECCCCEEE
Confidence 4567777665554 3345899999999999877776 36889999764
No 63
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=92.74 E-value=0.84 Score=26.64 Aligned_cols=67 Identities=13% Similarity=0.190 Sum_probs=42.7
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEE
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSL 104 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i 104 (150)
....+++|..+-..-.+...+++|++|.+.+.- +|+ ...+.+|+++- +.. ...+...+.+++.++.+
T Consensus 43 ~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~-~~~-~~~l~~Gd~~~----ip~----~~~H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 43 TVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI-DQE-TYRVAEGQTIV----MPA----GIPHALYAVEAFQMLLV 109 (115)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESEEEEEE-TTE-EEEEETTCEEE----ECT----TSCEEEEESSCEEEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeCEEEEEE-CCE-EEEECCCCEEE----ECC----CCCEEEEECCCceEEEE
Confidence 345678887764444446789999999999864 333 36788998653 322 23344455567666654
No 64
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=92.68 E-value=1.2 Score=29.84 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=46.0
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEE-cceeEEEEE
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRS-VGYAELFSL 104 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a-~~~~~~~~i 104 (150)
....+++|+.+-....+...+++|++|.+.+.-. |+ ...+.+|+++- +. ...++.+.+ .+++.++.+
T Consensus 156 ~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~-g~-~~~l~~Gd~i~----ip----~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 156 TIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVD-GK-PFIVKKGESAV----LP----ANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEEEEEEEEET-TE-EEEEETTEEEE----EC----TTSCEEEECCSSCEEEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeEEEEEEEC-CE-EEEECCCCEEE----EC----CCCcEEEEeCCCCEEEEEE
Confidence 4567889988765555667899999999998643 33 46889998643 32 234455666 777776653
No 65
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=92.47 E-value=0.24 Score=30.07 Aligned_cols=46 Identities=26% Similarity=0.338 Sum_probs=32.6
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
.....+|..-+...+ .+.+++|++|.+.+..++|.. ..+.+||.+-
T Consensus 53 ~w~~~pG~~~~~~~~-~~E~~~Vl~G~~~l~~~~g~~-~~l~~GD~~~ 98 (123)
T 3bcw_A 53 VWESTSGSFQSNTTG-YIEYCHIIEGEARLVDPDGTV-HAVKAGDAFI 98 (123)
T ss_dssp EEEEEEEEEECCCTT-EEEEEEEEEEEEEEECTTCCE-EEEETTCEEE
T ss_pred EEEECCCceeeEcCC-CcEEEEEEEEEEEEEECCCeE-EEECCCCEEE
Confidence 445667766544322 379999999999998656653 5789999664
No 66
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=92.19 E-value=1.1 Score=26.64 Aligned_cols=48 Identities=23% Similarity=0.360 Sum_probs=32.7
Q ss_pred ceEEeecCCceEEecCCc-cceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRKGEV-AREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
+....+++|..+-..-.+ ...+++|++|.+.+.-.+|+ ...+.+||++
T Consensus 41 ~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~-~~~l~~Gd~~ 89 (125)
T 3h8u_A 41 VVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGI-VTHLKAGDIA 89 (125)
T ss_dssp EEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTC-EEEEETTEEE
T ss_pred EEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCe-EEEeCCCCEE
Confidence 345677888776443344 36788999999998643444 3678899865
No 67
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=91.97 E-value=1.1 Score=26.17 Aligned_cols=68 Identities=15% Similarity=0.112 Sum_probs=43.8
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEE
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSL 104 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i 104 (150)
.....+++|..+-.--.+...+++|++|.+.+.- +|+ ...+.+|+++- +. ....+.+.+.+++.++.+
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~-~~~-~~~l~~Gd~~~----ip----~~~~H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 36 AVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV-DGV-IKVLTAGDSFF----VP----PHVDHGAVCPTGGILIDT 103 (116)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE-TTE-EEEECTTCEEE----EC----TTCCEEEEESSCEEEEEE
T ss_pred EEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE-CCE-EEEeCCCCEEE----EC----cCCceeeEeCCCcEEEEE
Confidence 3456778887754334446789999999999864 333 46789998642 32 223444555567776665
No 68
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=91.65 E-value=0.096 Score=30.46 Aligned_cols=48 Identities=19% Similarity=0.412 Sum_probs=33.1
Q ss_pred eEEeecCCceEEec-CCccceeEEEeeceEEEEecCCc-EEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRK-GEVAREMFIIADGILEVISESGR-VLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~g~-~~~~~~~g~~~ 75 (150)
....++||+-+-.. ......+|+|++|.+.+...+|. ....+.+|+.+
T Consensus 20 ~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~ 69 (98)
T 3lag_A 20 TEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSY 69 (98)
T ss_dssp EEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCE
T ss_pred EEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEE
Confidence 34578899887443 34445788889999999877776 44567788754
No 69
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=91.63 E-value=1.3 Score=26.47 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=34.8
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|..+-.. ...+.+++|++|.+.+.. +|+ ...+.+||.+-
T Consensus 43 ~~~~~~pG~~~~~H-~~~~E~~~Vl~G~~~~~~-~g~-~~~l~~GD~v~ 88 (119)
T 3lwc_A 43 GYGRYAPGQSLTET-MAVDDVMIVLEGRLSVST-DGE-TVTAGPGEIVY 88 (119)
T ss_dssp EEEEECTTCEEEEE-CSSEEEEEEEEEEEEEEE-TTE-EEEECTTCEEE
T ss_pred EEEEECCCCCcCcc-CCCCEEEEEEeCEEEEEE-CCE-EEEECCCCEEE
Confidence 45678888776543 378899999999999965 444 46799999654
No 70
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=91.59 E-value=0.78 Score=26.53 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=39.0
Q ss_pred ecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcHHH
Q psy1122 32 FTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSRED 108 (150)
Q Consensus 32 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 108 (150)
..+|+......+....+++|++|.+.+.-.+|+ ...+.+|+.+ ++..+ .+. +..+.+++.++.++...
T Consensus 35 ~~~g~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~-~~~l~~Gd~~----~ip~~--~~H--~~~~~~~~~~l~i~~~~ 102 (107)
T 2i45_A 35 KLLGDYGWHTHGYSDKVLFAVEGDMAVDFADGG-SMTIREGEMA----VVPKS--VSH--RPRSENGCSLVLIELSD 102 (107)
T ss_dssp EEEEECCCBCC--CCEEEEESSSCEEEEETTSC-EEEECTTEEE----EECTT--CCE--EEEEEEEEEEEEEECC-
T ss_pred ECCCCCcceeCCCCCEEEEEEeCEEEEEECCCc-EEEECCCCEE----EECCC--CcE--eeEeCCCeEEEEEECCC
Confidence 345543333333237899999999998755523 4679999865 33321 223 33334577777776443
No 71
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=91.57 E-value=1.4 Score=32.43 Aligned_cols=49 Identities=12% Similarity=0.188 Sum_probs=39.7
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEE--EecCCcEEEEecCCCe
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEV--ISESGRVLTTMKAGDF 74 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~~g~~~~~~~~g~~ 74 (150)
.+....+++|..+.+.-...+.++||++|...+ ++++++....+.+||+
T Consensus 53 s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv 103 (397)
T 2phl_A 53 RLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDN 103 (397)
T ss_dssp EEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSC
T ss_pred EEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCc
Confidence 345678899988776666788999999999988 4666667789999998
No 72
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=91.55 E-value=1.1 Score=29.02 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=32.6
Q ss_pred EEeecCCceEE---ecCCccceeEEEeeceEEEEecCC-c-EEEEecCCCeee
Q psy1122 29 AYIFTPGDLIC---RKGEVAREMFIIADGILEVISESG-R-VLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~g~~i~---~~g~~~~~~y~i~~G~v~~~~~~g-~-~~~~~~~g~~~g 76 (150)
...+++|...- ....+...+++|++|.+.+.-.++ . ....+.+||.+-
T Consensus 121 ~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~ 173 (198)
T 2bnm_A 121 VVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMF 173 (198)
T ss_dssp EEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEE
T ss_pred EEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEE
Confidence 44677876543 123344789999999999864442 1 567899999663
No 73
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=91.39 E-value=1.6 Score=26.78 Aligned_cols=45 Identities=22% Similarity=0.171 Sum_probs=31.9
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
-...+++|..-+ ....+.+++|++|.+.+... |+. ..+.+||.+-
T Consensus 60 ~~~~~~pG~~~~--h~~~~E~~~VLeG~~~l~~~-g~~-~~l~~GD~i~ 104 (133)
T 2pyt_A 60 GFMQWDNAFFPW--TLNYDEIDMVLEGELHVRHE-GET-MIAKAGDVMF 104 (133)
T ss_dssp EEEEEEEEEEEE--ECSSEEEEEEEEEEEEEEET-TEE-EEEETTCEEE
T ss_pred EEEEECCCCccc--cCCCCEEEEEEECEEEEEEC-CEE-EEECCCcEEE
Confidence 355777884322 23468999999999998754 553 4899999664
No 74
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=90.16 E-value=1.9 Score=25.60 Aligned_cols=47 Identities=11% Similarity=0.185 Sum_probs=34.2
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
+....+++|..+-..-.+...+++|++|.+.+.-.+ + ...+.+|+++
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-~-~~~l~~Gd~~ 89 (126)
T 4e2g_A 43 LNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGE-E-TRVLRPGMAY 89 (126)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETT-E-EEEECTTEEE
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECC-E-EEEeCCCCEE
Confidence 345678888877555555688999999999986433 3 3688898865
No 75
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=90.03 E-value=1.1 Score=27.77 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=34.4
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEE--EEecCCCeee
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVL--TTMKAGDFFG 76 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~--~~~~~g~~~g 76 (150)
....++++|..+-.-..+....++|++|.... .+|... ..+.+|+++-
T Consensus 46 ~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~--~~g~~~~~~~~~~Gd~~~ 95 (145)
T 2o1q_A 46 TAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDV--RGGKAAGGDTAIAPGYGY 95 (145)
T ss_dssp EEEEEECTTEEECCEEESSCEEEEEEEEEEEE--TTCGGGTSEEEESSEEEE
T ss_pred EEEEEECCCCCCCccCCCCCEEEEEEEeEEEE--cCCCEecceEeCCCEEEE
Confidence 45678999988866666677889999999983 344422 5677777553
No 76
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=89.64 E-value=1.7 Score=24.45 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=31.5
Q ss_pred eEEeecCCceEEecCCc-cceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEV-AREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|..+-..-.+ ...+++|++|.+.+.-. |+ ...+.+|+++
T Consensus 31 ~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~-~~-~~~l~~Gd~~ 77 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG-EE-EALLAPGMAA 77 (105)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET-TE-EEEECTTCEE
T ss_pred EEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC-CE-EEEeCCCCEE
Confidence 45577888776433333 35699999999998643 32 4678899865
No 77
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=89.62 E-value=3.7 Score=29.65 Aligned_cols=49 Identities=16% Similarity=0.099 Sum_probs=35.5
Q ss_pred eEEeecCCceEEecCCcc-ceeEEEeeceEEEE--ecCCc-EEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVA-REMFIIADGILEVI--SESGR-VLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~-~~~y~i~~G~v~~~--~~~g~-~~~~~~~g~~~g 76 (150)
....+++|...-..-.+. ..+++|++|.+.+. +.+|+ ....+.+||++-
T Consensus 260 ~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ 312 (385)
T 1j58_A 260 ALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGY 312 (385)
T ss_dssp EEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEE
T ss_pred EEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEE
Confidence 455778887764433444 78999999999874 35664 678899999764
No 78
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=89.59 E-value=0.76 Score=34.32 Aligned_cols=49 Identities=16% Similarity=0.312 Sum_probs=37.8
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCcEEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGRVLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~~~~~~~~g~~~ 75 (150)
+....++||..+-......+.++||++|.+.+. ++++.....+.+||++
T Consensus 88 ~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~ 138 (445)
T 2cav_A 88 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAI 138 (445)
T ss_dssp EEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEE
T ss_pred EEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEE
Confidence 345688999887666555789999999999873 4554567889999987
No 79
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=89.49 E-value=1.9 Score=24.76 Aligned_cols=47 Identities=23% Similarity=0.420 Sum_probs=32.9
Q ss_pred ceEEeecCCceEEec--CCc-cceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRK--GEV-AREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~--g~~-~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
+....+++|..+-.. -.+ ...+++|++|.+.+.-. |+ ...+.+|+++
T Consensus 23 ~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~-~~-~~~l~~Gd~~ 72 (113)
T 2gu9_A 23 AAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD-GH-TQALQAGSLI 72 (113)
T ss_dssp EEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET-TE-EEEECTTEEE
T ss_pred EEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC-CE-EEEeCCCCEE
Confidence 345578888876443 334 67899999999998643 33 3678888865
No 80
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=88.75 E-value=2.5 Score=25.20 Aligned_cols=46 Identities=24% Similarity=0.415 Sum_probs=30.9
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|..+-.--.+...+++|++|.+.+.-.+ + ...+.+|+++
T Consensus 51 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~-~-~~~l~~Gd~i 96 (126)
T 1vj2_A 51 RLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQ-G-EETVEEGFYI 96 (126)
T ss_dssp EEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSS-C-EEEEETTEEE
T ss_pred EEEEECCCCcCCceeCCCcEEEEEEEeEEEEEECC-E-EEEECCCCEE
Confidence 34566776655433344678999999999986433 3 3578888865
No 81
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=88.70 E-value=1 Score=33.50 Aligned_cols=50 Identities=12% Similarity=0.204 Sum_probs=38.6
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCcEEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGRVLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~~~~~~~~g~~~ 75 (150)
.+....+++|..+-......+.++||++|.+.+. ++++.....+.+||++
T Consensus 62 s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~ 113 (434)
T 2ea7_A 62 RVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQ 113 (434)
T ss_dssp EEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEE
T ss_pred EEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEE
Confidence 4457789999888776555689999999999873 3444467789999986
No 82
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=88.64 E-value=2.9 Score=28.20 Aligned_cols=46 Identities=15% Similarity=0.060 Sum_probs=32.9
Q ss_pred EEeecC-CceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 29 AYIFTP-GDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~-g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
...+++ |..+-..-.+...+++|++|.+.+.-.+ + ...+.+||.+-
T Consensus 149 ~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~-~-~~~l~~Gd~i~ 195 (243)
T 3h7j_A 149 LAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEG-C-TVEMKFGTAYF 195 (243)
T ss_dssp EEEECTTTEEEEEECCSSEEEEEECSSCEEEEETT-E-EEEECTTCEEE
T ss_pred EEEECCCCCcCCCEeCCCcEEEEEEECEEEEEECC-E-EEEECCCCEEE
Confidence 445888 7776554555678999999999986433 3 35699999653
No 83
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=88.53 E-value=3.7 Score=27.84 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=35.8
Q ss_pred hceEEeecCCceEEe-cCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 26 KMKAYIFTPGDLICR-KGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
.+...++++|..+=. ........++|++|.+.+.. +|+ ...+.+||++-
T Consensus 166 ~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~-~~~-~~~l~~GD~~~ 215 (246)
T 1sfn_A 166 MVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL-EEN-YYPVTAGDIIW 215 (246)
T ss_dssp EEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE-TTE-EEEEETTCEEE
T ss_pred EEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE-CCE-EEEcCCCCEEE
Confidence 345668899987643 44556789999999999864 333 45899999754
No 84
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=88.46 E-value=0.97 Score=33.40 Aligned_cols=50 Identities=12% Similarity=0.202 Sum_probs=37.9
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCcEEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGRVLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~~~~~~~~g~~~ 75 (150)
.+....+++|..+-......+.++||++|.+.+. ++++.....+.+||++
T Consensus 50 s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~ 101 (416)
T 1uij_A 50 RIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQ 101 (416)
T ss_dssp EEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEE
T ss_pred EEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEE
Confidence 3457788999877666556689999999999973 4433466789999876
No 85
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=88.40 E-value=4.8 Score=27.95 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=60.1
Q ss_pred cCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEE-ecCCCeeeee---eeeccCCCCce
Q psy1122 14 ECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTT-MKAGDFFGEI---GILNLDGLNKR 89 (150)
Q Consensus 14 ~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~-~~~g~~~g~~---~~~~~~~~~~~ 89 (150)
.++++.-...-..+....+++|+.+-..-+..+...+++.|.+.+.- +|..... -.+.++|... ++.-+ ...
T Consensus 18 ~itp~~a~~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~-~g~~~~~~g~R~svF~~~~p~~lYvp---~g~ 93 (270)
T 2qjv_A 18 HISPQNAGWEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXA-ADSFFYRIGQRMSPFERIPAYSVYLP---HHT 93 (270)
T ss_dssp EECHHHHTSSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEE-TTEEEEEECCCSSGGGCSCCCEEEEC---SSC
T ss_pred EeCCCCCCcEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEE-CCEEEeccccccccccCCCCcEEEEC---CCC
Confidence 34554444333456788999999998888878889999999999864 4554333 4566777643 33333 334
Q ss_pred eeEEEEcceeEEEEEc
Q psy1122 90 TADVRSVGYAELFSLS 105 (150)
Q Consensus 90 ~~~~~a~~~~~~~~i~ 105 (150)
.+++.|.++++++...
T Consensus 94 ~v~i~a~~~~~~~v~s 109 (270)
T 2qjv_A 94 EAXVTAETDLELAVCS 109 (270)
T ss_dssp CEEEEESSSEEEEEEE
T ss_pred EEEEEecCCceEEEEe
Confidence 7888899898887754
No 86
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=88.38 E-value=3 Score=26.08 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=32.3
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecC------Cc-EEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISES------GR-VLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~------g~-~~~~~~~g~~~ 75 (150)
....+++|..+-..-.....+++|++|.+.+.-.+ ++ ....+.+|+++
T Consensus 44 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i 98 (163)
T 1lr5_A 44 WLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTF 98 (163)
T ss_dssp EEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEE
T ss_pred EEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEE
Confidence 45567888765322234567999999999985433 12 56789999865
No 87
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=88.06 E-value=1.2 Score=32.95 Aligned_cols=56 Identities=20% Similarity=0.235 Sum_probs=42.4
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEE--EecCCcEEEEecCCCee----eeeeeecc
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEV--ISESGRVLTTMKAGDFF----GEIGILNL 83 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~~g~~~~~~~~g~~~----g~~~~~~~ 83 (150)
....+.+|..+.+..-..+.++||++|.+.+ +++++.....+.+||+| |...++.+
T Consensus 47 ~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 47 VQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp EEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEE
T ss_pred EEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEe
Confidence 4557789988888766678999999999987 45655677899999987 44444443
No 88
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=88.01 E-value=3 Score=25.18 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=31.5
Q ss_pred eEEeecCCceEEecCCc-cceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEV-AREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|..+-.--.+ ...+++|++|.+.+... |+ ...+.+||++
T Consensus 60 ~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~-~~-~~~l~~Gd~i 106 (133)
T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN-GK-DVPIKAGDVC 106 (133)
T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET-TE-EEEEETTEEE
T ss_pred EEEEECCCCccCceECCCccEEEEEEeCEEEEEEC-CE-EEEeCCCcEE
Confidence 35578888765332233 46899999999998643 33 4678898865
No 89
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=87.99 E-value=5.6 Score=28.37 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=34.4
Q ss_pred eEEeecCCceEEecCCc-cceeEEEeeceEEEE--ecCCc-EEEEecCCCee
Q psy1122 28 KAYIFTPGDLICRKGEV-AREMFIIADGILEVI--SESGR-VLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~--~~~g~-~~~~~~~g~~~ 75 (150)
....+.+|...-..-.+ ...++||++|.+.+. +.+|+ ....+.+||++
T Consensus 55 ~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~ 106 (361)
T 2vqa_A 55 VYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLW 106 (361)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEE
T ss_pred EEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEE
Confidence 35567888765433334 789999999999884 44564 56789999965
No 90
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=87.98 E-value=1.9 Score=32.91 Aligned_cols=57 Identities=21% Similarity=0.294 Sum_probs=41.6
Q ss_pred HHHHHHhceEEeecCCceEEecCCc-cceeEEEeeceEEE--EecCCc--EEEEecCCCeee
Q psy1122 20 LHDLVLKMKAYIFTPGDLICRKGEV-AREMFIIADGILEV--ISESGR--VLTTMKAGDFFG 76 (150)
Q Consensus 20 ~~~l~~~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~--~~~~g~--~~~~~~~g~~~g 76 (150)
++.+--.+....+++|-++-.--.+ ++.+.+|++|.+++ ++++|+ ....+.+||+|-
T Consensus 389 L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v 450 (531)
T 3fz3_A 389 LRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFI 450 (531)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred cccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEE
Confidence 4444446678899999887543333 57999999999997 466666 567899999763
No 91
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=87.83 E-value=2.7 Score=24.36 Aligned_cols=48 Identities=21% Similarity=0.259 Sum_probs=35.3
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
.+-...+++|..-+. .+...+++|++|.+.+...+|. ...+.+||.+-
T Consensus 32 ~~~~~~~~pg~~~~h--H~~~E~~~Vl~G~~~~~i~~g~-~~~l~~GD~i~ 79 (101)
T 1o5u_A 32 KWPIWEKEVSEFDWY--YDTNETCYILEGKVEVTTEDGK-KYVIEKGDLVT 79 (101)
T ss_dssp GSCEEEECSEEEEEE--CSSCEEEEEEEEEEEEEETTCC-EEEEETTCEEE
T ss_pred EEEEEEeCCCccccc--CCceEEEEEEeCEEEEEECCCC-EEEECCCCEEE
Confidence 345778888876554 4568999999999998754344 36799999653
No 92
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=87.79 E-value=4.2 Score=29.04 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=36.1
Q ss_pred ceEEeecCCceEEecCCcc-ceeEEEeeceEEEE--ecCCc-EEEEecCCCeee
Q psy1122 27 MKAYIFTPGDLICRKGEVA-REMFIIADGILEVI--SESGR-VLTTMKAGDFFG 76 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~-~~~y~i~~G~v~~~--~~~g~-~~~~~~~g~~~g 76 (150)
+....+++|..+-..-.+. ..+++|++|.+.+. +.+|+ ....+.+||++-
T Consensus 236 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ 289 (361)
T 2vqa_A 236 GALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGY 289 (361)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEE
T ss_pred EEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEE
Confidence 3456788888764433344 79999999999984 34565 568899999763
No 93
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=87.60 E-value=1.8 Score=31.34 Aligned_cols=49 Identities=20% Similarity=0.280 Sum_probs=35.7
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc-EEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR-VLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~-~~~~~~~g~~~ 75 (150)
+....+.+|..+-..-.+...++||++|.+.+. +.+|+ ....+.+||++
T Consensus 81 ~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~ 132 (385)
T 1j58_A 81 SVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLW 132 (385)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEE
T ss_pred EEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEE
Confidence 345677888876444444789999999999984 34566 35689999965
No 94
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=87.51 E-value=2.9 Score=24.42 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=29.6
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
...+++|..+-........+++|++|.+.+.-.+ +....+.+|+++
T Consensus 31 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~-~~~~~l~~Gd~i 76 (117)
T 2b8m_A 31 HIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLED-QEPHNYKEGNIV 76 (117)
T ss_dssp EEEEETTCBCCCEECSSCEEEEEEESEEEEEETT-SCCEEEETTCEE
T ss_pred EEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECC-EEEEEeCCCCEE
Confidence 4456677654222234567899999999986433 332378899865
No 95
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=87.29 E-value=4.2 Score=26.03 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=29.7
Q ss_pred EEeecC-Cce-EEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 29 AYIFTP-GDL-ICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~-g~~-i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
...+++ |.. =-........++||++|.+.+.- +|+ ...+.+|+.|-
T Consensus 92 ~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl-~g~-~~~L~~Gds~~ 139 (166)
T 2vpv_A 92 ILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV-CKN-KFLSVKGSTFQ 139 (166)
T ss_dssp EEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE-TTE-EEEEETTCEEE
T ss_pred EEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE-CCE-EEEEcCCCEEE
Confidence 346666 432 12233446789999999999864 333 45889998653
No 96
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=87.19 E-value=2 Score=32.66 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=38.5
Q ss_pred HHHHHhceEEeecCCceEEecCCc-cceeEEEeeceEEE--EecCCc--EEEEecCCCee
Q psy1122 21 HDLVLKMKAYIFTPGDLICRKGEV-AREMFIIADGILEV--ISESGR--VLTTMKAGDFF 75 (150)
Q Consensus 21 ~~l~~~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~--~~~~g~--~~~~~~~g~~~ 75 (150)
..+--.+....+++|.++-.--.+ .+.+++|++|.+.+ .+++|. ....+.+||++
T Consensus 368 ~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~ 427 (510)
T 3c3v_A 368 RWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVL 427 (510)
T ss_dssp HHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred ccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEE
Confidence 334445567788999876443333 57999999999988 355665 33469999976
No 97
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=87.02 E-value=3.8 Score=25.28 Aligned_cols=48 Identities=17% Similarity=0.231 Sum_probs=32.3
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|..+-..-.+...+++|++|.+.+.-.+. ....+.+|+++-
T Consensus 51 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~-~~~~l~~Gd~i~ 98 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGK-PARILKKGDVVE 98 (147)
T ss_dssp EEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTS-CCEEEETTCEEE
T ss_pred EEEEECCCCccCceECCCceEEEEEeCEEEEEECCE-EEEEECCCCEEE
Confidence 455677887663333345789999999999864333 225788998663
No 98
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=86.62 E-value=2.4 Score=31.95 Aligned_cols=50 Identities=8% Similarity=0.147 Sum_probs=35.8
Q ss_pred hceEEeecCCceEEecCCc-cceeEEEeeceEEE--EecCCc--EEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICRKGEV-AREMFIIADGILEV--ISESGR--VLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~--~~~~g~--~~~~~~~g~~~ 75 (150)
.+....+++|..+-.--.+ .+.+++|++|.+.+ .+++|. ....+.+||++
T Consensus 339 s~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~ 393 (476)
T 1fxz_A 339 SAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVL 393 (476)
T ss_dssp CEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred eEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEE
Confidence 4466788899876443334 57999999999988 355665 33469999976
No 99
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=86.17 E-value=2.7 Score=31.84 Aligned_cols=56 Identities=13% Similarity=0.241 Sum_probs=38.6
Q ss_pred HHHHHhceEEeecCCceEEecCCc-cceeEEEeeceEEEE--ecCCc-EE-EEecCCCeee
Q psy1122 21 HDLVLKMKAYIFTPGDLICRKGEV-AREMFIIADGILEVI--SESGR-VL-TTMKAGDFFG 76 (150)
Q Consensus 21 ~~l~~~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~--~~~g~-~~-~~~~~g~~~g 76 (150)
..+--.+....+++|..+-.--.+ .+.+++|++|.+.+. +.+|+ .+ ..+.+||++-
T Consensus 363 ~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 363 RQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp HHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred cccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 344345667788999866443333 579999999999883 45555 33 5699999763
No 100
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=85.82 E-value=3.5 Score=24.16 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=25.5
Q ss_pred CCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 42 GEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 42 g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
......+++|++|.+.+.-.++.....+.+||.+-
T Consensus 50 ~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ 84 (112)
T 2opk_A 50 DSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLH 84 (112)
T ss_dssp CCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEE
T ss_pred cCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEE
Confidence 34567899999999999655543225789998654
No 101
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=85.73 E-value=3 Score=31.29 Aligned_cols=57 Identities=14% Similarity=0.289 Sum_probs=40.4
Q ss_pred HHHHHHhceEEeecCCceEEecCCc-cceeEEEeeceEEE--EecCCc-EE-EEecCCCeee
Q psy1122 20 LHDLVLKMKAYIFTPGDLICRKGEV-AREMFIIADGILEV--ISESGR-VL-TTMKAGDFFG 76 (150)
Q Consensus 20 ~~~l~~~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~--~~~~g~-~~-~~~~~g~~~g 76 (150)
++.+--.+....+.+|.+.-.--.+ .+.+++|++|.+++ ++++|. .+ ..+.+||+|-
T Consensus 317 L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v 378 (459)
T 2e9q_A 317 LRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLM 378 (459)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred ccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEE
Confidence 3444445677788999877644433 57999999999988 466666 33 4699999763
No 102
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=85.25 E-value=5.6 Score=25.67 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=34.2
Q ss_pred ccceeEEEeeceEEE-EecCC----c-EEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcH
Q psy1122 44 VAREMFIIADGILEV-ISESG----R-VLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSR 106 (150)
Q Consensus 44 ~~~~~y~i~~G~v~~-~~~~g----~-~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 106 (150)
+.+.++++++|.+.+ +..+| + .-..+.+|++|- +.. .-+++-.+-.++..+.+..
T Consensus 53 ~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfl----lP~----gvpHsP~r~~e~v~lviEr 113 (176)
T 1zvf_A 53 PTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYL----LPG----NVPHSPVRFADTVGIVVEQ 113 (176)
T ss_dssp SSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEE----ECT----TCCEEEEECTTCEEEEEEE
T ss_pred CCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEE----cCC----CCCcCCcccCCcEEEEEEe
Confidence 345899999999998 44446 3 457899998764 322 2223333345666666643
No 103
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=85.12 E-value=4.1 Score=29.91 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=47.1
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEE-cceeEEEEEcH
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRS-VGYAELFSLSR 106 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a-~~~~~~~~i~~ 106 (150)
....+++|+..-........+|||++|.....- +|+ ...+.+||+|-.-.. ......... -+++.++.+.-
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V-~ge-~~~~~~GD~~~iP~g------~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIV-GGK-RFDWSEHDIFCVPAW------TWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEEEE-TTE-EEEECTTCEEEECTT------CCEEEEECCSSCCEEEEEEES
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEEEE-CCE-EEEEeCCCEEEECCC------CeEEeEeCCCCCCeEEEEeeC
Confidence 344566776665555557789999999986543 343 578999997653222 122221112 45788888876
Q ss_pred HHHHHHH
Q psy1122 107 EDVLSAM 113 (150)
Q Consensus 107 ~~~~~l~ 113 (150)
.-+...+
T Consensus 369 ~Pl~~~L 375 (394)
T 3bu7_A 369 FPVMEKL 375 (394)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 6555544
No 104
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=84.89 E-value=5.1 Score=24.89 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=37.9
Q ss_pred EecCCccceeEEEeeceEEEEecC---C---cEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcHH
Q psy1122 39 CRKGEVAREMFIIADGILEVISES---G---RVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSRE 107 (150)
Q Consensus 39 ~~~g~~~~~~y~i~~G~v~~~~~~---g---~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 107 (150)
+...+..+.+|+|++|.+.+.-.+ + .-...+.+|+++- ... ---++-.|.++|.++.+...
T Consensus 44 ~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yv----VPk----GveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 44 LEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYN----VPA----ECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp EEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEE----ECT----TCEEEEEECTTCEEEEEEES
T ss_pred hccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEE----eCC----CccCcccCCCceEEEEEEeC
Confidence 344566789999999999984221 1 1356788888653 322 12333345677777776544
No 105
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=84.72 E-value=3.3 Score=27.75 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=30.4
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
...+++|..+=.-..+.+.+|+|++|.+...-.+|. ...+.+|+.+
T Consensus 136 ~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g~-~~~l~pGd~v 181 (217)
T 4b29_A 136 VGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNAP-DLMLEPGQTR 181 (217)
T ss_dssp EEEECSSCEEEEEECSSEEEEEEEEECEEEEETTSC-CEEECTTCEE
T ss_pred EEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCCC-EEecCCCCEE
Confidence 345666655323334578999999999988644343 3578888854
No 106
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=84.64 E-value=3.7 Score=23.01 Aligned_cols=50 Identities=16% Similarity=0.370 Sum_probs=32.2
Q ss_pred ceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEc
Q psy1122 46 REMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLS 105 (150)
Q Consensus 46 ~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~ 105 (150)
..++++++|.+.+.-.+ + ...+.+|+++ ++.. ...+...+.+++.++.++
T Consensus 51 ~e~~~v~~G~~~~~~~~-~-~~~l~~Gd~~----~ip~----~~~H~~~~~~~~~~l~i~ 100 (102)
T 3d82_A 51 DEVFIVMEGTLQIAFRD-Q-NITLQAGEMY----VIPK----GVEHKPMAKEECKIMIIE 100 (102)
T ss_dssp CEEEEEEESEEEEECSS-C-EEEEETTEEE----EECT----TCCBEEEEEEEEEEEEEE
T ss_pred cEEEEEEeCEEEEEECC-E-EEEEcCCCEE----EECC----CCeEeeEcCCCCEEEEEE
Confidence 78999999999986433 3 3567898854 3332 223333444678777765
No 107
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=84.53 E-value=2 Score=27.69 Aligned_cols=33 Identities=27% Similarity=0.288 Sum_probs=25.3
Q ss_pred ccceeEEEeeceEEEE-ecCCc-EEEEecCCCeee
Q psy1122 44 VAREMFIIADGILEVI-SESGR-VLTTMKAGDFFG 76 (150)
Q Consensus 44 ~~~~~y~i~~G~v~~~-~~~g~-~~~~~~~g~~~g 76 (150)
+.+.++++++|.+.+. ..+|+ .-..+.+|++|-
T Consensus 54 ~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~ 88 (174)
T 1yfu_A 54 PLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFL 88 (174)
T ss_dssp SSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEE
T ss_pred CCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEE
Confidence 4678999999999984 44464 557899999764
No 108
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=84.27 E-value=5.4 Score=27.60 Aligned_cols=69 Identities=9% Similarity=0.050 Sum_probs=42.2
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEc
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLS 105 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~ 105 (150)
...++++|.---......+.+.||++|.+.+.-.+|+ ...+.+|+.+- +.. ...++....++++++++.
T Consensus 73 ~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~g~-~~~L~~Gds~y----~p~----~~~H~~~N~~~Ar~l~V~ 141 (266)
T 4e2q_A 73 YLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTSSS-SKKLTVDSYAY----LPP----NFHHSLDCVESATLVVFE 141 (266)
T ss_dssp EEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--CC-CEEECTTEEEE----ECT----TCCCEEEESSCEEEEEEE
T ss_pred EEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECCCc-EEEEcCCCEEE----ECC----CCCEEEEeCCCEEEEEEE
Confidence 4667788765322234457899999999999754244 25789998653 221 122222334678887773
No 109
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=84.02 E-value=1.8 Score=27.14 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=31.5
Q ss_pred eEEeecCCce-E-EecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDL-I-CRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~-i-~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|.. . .........+++|++|.+.+.-. |+ ...+.+||++
T Consensus 49 ~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~-~~-~~~l~~Gd~i 96 (162)
T 3l2h_A 49 HLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME-ND-QYPIAPGDFV 96 (162)
T ss_dssp EEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET-TE-EEEECTTCEE
T ss_pred EEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC-CE-EEEeCCCCEE
Confidence 4467788873 2 22233467899999999998643 33 3678888876
No 110
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=83.74 E-value=4.4 Score=23.08 Aligned_cols=67 Identities=13% Similarity=0.260 Sum_probs=39.4
Q ss_pred eEEeecCCceEEecCCcc-cee-EEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEE
Q psy1122 28 KAYIFTPGDLICRKGEVA-REM-FIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFS 103 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~-~~~-y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~ 103 (150)
....+++|..+-..-.+. ..+ ++|++|.+.+.-.+|+ ...+.+|+++- +.. ...+.+.+.+++.++.
T Consensus 36 ~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~-~~~l~~Gd~~~----ip~----~~~H~~~~~~~~~~l~ 104 (110)
T 2q30_A 36 VSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDA-VIPAPRGAVLV----API----STPHGVRAVTDMKVLV 104 (110)
T ss_dssp EEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGC-EEEECTTEEEE----EET----TSCEEEEESSSEEEEE
T ss_pred EEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCE-EEEECCCCEEE----eCC----CCcEEEEEcCCcEEEE
Confidence 445678887764333332 456 7999999998654233 36788988542 322 2333444555655443
No 111
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=83.64 E-value=1.4 Score=32.31 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=36.2
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|+.+-........+|||++|....+.-+|+ ...+.+||+|-
T Consensus 126 ~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G~-~~~~~~GD~i~ 173 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGH-KVELGANDFVL 173 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTE-EEEECTTCEEE
T ss_pred EEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECCE-EEEEcCCCEEE
Confidence 5678899988866555667899999998865444555 35789999764
No 112
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=83.51 E-value=2.2 Score=26.98 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=31.3
Q ss_pred eEEeecCCceE--EecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLI--CRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i--~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|... .......+.+++|++|.+.+.-.+ + ...+.+|+++
T Consensus 46 ~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~-~-~~~l~~GD~i 93 (163)
T 3i7d_A 46 NLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQ-G-EHPMVPGDCA 93 (163)
T ss_dssp EEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETT-E-EEEECTTCEE
T ss_pred EEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECC-E-EEEeCCCCEE
Confidence 45677888754 233333468999999999986433 2 4678888865
No 113
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=83.08 E-value=3.5 Score=26.10 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=32.7
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
.....++++|..+-.-..+.....+|++|..... ++| ..+.+|+++
T Consensus 43 ~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~-e~~---~~~~~Gd~~ 88 (159)
T 3ebr_A 43 TITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK-EHD---WVAHAGSVV 88 (159)
T ss_dssp EEEEEEECSSCBCCCEEESSCEEEEEEESCEEET-TSS---CCBCTTCEE
T ss_pred EEEEEEECCCCCcccccCCCCEEEEEEEeEEEEe-CCC---eEECCCeEE
Confidence 3456788999888766666788889999999853 333 256677653
No 114
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=83.08 E-value=6.1 Score=24.25 Aligned_cols=47 Identities=9% Similarity=-0.052 Sum_probs=30.0
Q ss_pred EEeecCCceEEecCC-ccceeEEEeeceEEEEecCCc----EEEEecCCCee
Q psy1122 29 AYIFTPGDLICRKGE-VAREMFIIADGILEVISESGR----VLTTMKAGDFF 75 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~g~----~~~~~~~g~~~ 75 (150)
...+++|..+-..-. ....+++|++|.+.+.-.+.. ....+.+|+++
T Consensus 47 ~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i 98 (148)
T 2oa2_A 47 LMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAI 98 (148)
T ss_dssp EEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEE
T ss_pred EEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEE
Confidence 446677765422222 245899999999998543332 23688999864
No 115
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=83.06 E-value=1.9 Score=24.88 Aligned_cols=49 Identities=18% Similarity=0.404 Sum_probs=31.2
Q ss_pred eEEeecCCceEE-ecCCccceeEEEeeceEEEEecCCc-EEEEecCCCeee
Q psy1122 28 KAYIFTPGDLIC-RKGEVAREMFIIADGILEVISESGR-VLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~g~-~~~~~~~g~~~g 76 (150)
....++||...- ........++++.+|.+.+...+|. ....+.+|+.+.
T Consensus 20 ~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~ 70 (98)
T 2ozi_A 20 TEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYA 70 (98)
T ss_dssp EEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEE
T ss_pred EEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEE
Confidence 456788888762 2222122333457999999877887 467899999664
No 116
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=82.81 E-value=5.5 Score=29.86 Aligned_cols=58 Identities=14% Similarity=0.135 Sum_probs=41.9
Q ss_pred HHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEEE--ecCCc----------------------EEEEecCCC
Q psy1122 18 EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEVI--SESGR----------------------VLTTMKAGD 73 (150)
Q Consensus 18 ~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~g~----------------------~~~~~~~g~ 73 (150)
..++.+--.+....+++|..+...-.....++||++|...+. .+++. .+..+.+||
T Consensus 56 ~~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GD 135 (459)
T 2e9q_A 56 DEFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGD 135 (459)
T ss_dssp HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTE
T ss_pred hhhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCC
Confidence 344444445667789999988766667889999999999883 33322 246899999
Q ss_pred ee
Q psy1122 74 FF 75 (150)
Q Consensus 74 ~~ 75 (150)
+|
T Consensus 136 v~ 137 (459)
T 2e9q_A 136 LL 137 (459)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 117
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=82.73 E-value=2.3 Score=28.99 Aligned_cols=46 Identities=24% Similarity=0.298 Sum_probs=30.9
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
+....+|...... ...+.+++|++|.+.+..++|.. ..+.+||.+-
T Consensus 171 iW~~tpG~~~~~~-~~~~E~~~ILeG~v~lt~~~G~~-~~~~aGD~~~ 216 (238)
T 3myx_A 171 VWDSTPYERISRP-HKIHELMNLIEGRVVLSLENGSS-LTVNTGDTVF 216 (238)
T ss_dssp EEEECCEEBCCEE-CSSCEEEEEEECCEEEEETTSCE-EEECTTCEEE
T ss_pred EEEeCCCEEECCc-CCCCEEEEEEEeEEEEEeCCCCE-EEECCCCEEE
Confidence 3444555433221 13467888999999999877774 5799999764
No 118
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=82.66 E-value=5.5 Score=23.48 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=29.6
Q ss_pred eEEeecCCceEE--ecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLIC--RKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~--~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|..+- ...+....+|+|++|.+.+.-. |+ ...+.+|+++
T Consensus 29 ~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~-~~-~~~l~~Gd~i 76 (125)
T 3cew_A 29 SINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID-GE-KIELQAGDWL 76 (125)
T ss_dssp EEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET-TE-EEEEETTEEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC-CE-EEEeCCCCEE
Confidence 455778887552 2233334577799999998643 33 3678888865
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=82.62 E-value=7.4 Score=27.16 Aligned_cols=61 Identities=16% Similarity=0.209 Sum_probs=39.4
Q ss_pred eEEecCCccceeEEEeeceEEE-EecCCc-EEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcH
Q psy1122 37 LICRKGEVAREMFIIADGILEV-ISESGR-VLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSR 106 (150)
Q Consensus 37 ~i~~~g~~~~~~y~i~~G~v~~-~~~~g~-~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 106 (150)
..|. -+..+.++++++|.+.+ +.++|+ .-..+.+|++|- +.. .-+++=.+-++|..+.|..
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfl----lP~----gv~HsP~r~~et~gLviE~ 106 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFL----LPA----RVPHSPQRFANTVGLVVER 106 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEE----ECT----TCCEEEEECTTCEEEEEEE
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEE----eCC----CCCcCCcccCCeEEEEEee
Confidence 3344 45578899999999998 444574 457889988664 332 2333334456777777754
No 120
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=82.50 E-value=7.4 Score=29.31 Aligned_cols=66 Identities=11% Similarity=0.029 Sum_probs=45.7
Q ss_pred HHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEE--EecCCc-----------------------EEEEecCC
Q psy1122 18 EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEV--ISESGR-----------------------VLTTMKAG 72 (150)
Q Consensus 18 ~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~~g~-----------------------~~~~~~~g 72 (150)
..+..+--.+....+++|..+...-.+...++||++|...+ +.+++. .+..+.+|
T Consensus 41 ~~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~G 120 (476)
T 1fxz_A 41 KPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREG 120 (476)
T ss_dssp HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTT
T ss_pred hhhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCC
Confidence 34444444566778999999877667788999999999887 333321 26789999
Q ss_pred Cee----eeeeeecc
Q psy1122 73 DFF----GEIGILNL 83 (150)
Q Consensus 73 ~~~----g~~~~~~~ 83 (150)
|+| |...++.+
T Consensus 121 Dvi~iPaG~~h~~~N 135 (476)
T 1fxz_A 121 DLIAVPTGVAWWMYN 135 (476)
T ss_dssp EEEEECTTCEEEEEE
T ss_pred CEEEECCCCcEEEEe
Confidence 987 34444444
No 121
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=82.36 E-value=4.1 Score=24.62 Aligned_cols=45 Identities=9% Similarity=0.178 Sum_probs=27.0
Q ss_pred EeecCCceEEecCCccceeEEEeeceEEEEe-cCCcEEEEecCCCee
Q psy1122 30 YIFTPGDLICRKGEVAREMFIIADGILEVIS-ESGRVLTTMKAGDFF 75 (150)
Q Consensus 30 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~g~~~~~~~~g~~~ 75 (150)
..+++|..+-.--.+...+++|++|.+.+.. .+| ....+.+|+++
T Consensus 44 ~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~-~~~~l~~Gd~~ 89 (145)
T 3ht1_A 44 FEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQG-RTEEVGPGEAI 89 (145)
T ss_dssp EEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGT-EEEEECTTCEE
T ss_pred EEECCCCcCCCccCCCceEEEEEEeEEEEEEeECC-EEEEECCCCEE
Confidence 3455554432222234456679999999872 233 34678899865
No 122
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=81.96 E-value=4.8 Score=26.30 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=43.6
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEE--cceeEEEE
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRS--VGYAELFS 103 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a--~~~~~~~~ 103 (150)
......+++|..+-.-..+...+.+|++|.+. +++| .+.+|+++- .. ....++..+ .++|.++.
T Consensus 126 ~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~--de~~----~~~~Gd~~~----~p----~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 126 IARLLWIPGGQAVPDHGHRGLELTLVLQGAFR--DETD----RFGAGDIEI----AD----QELEHTPVAERGLDCICLA 191 (195)
T ss_dssp EEEEEEECTTCBCCCCCCSSCEEEEEEESEEE--CSSS----EEETTCEEE----EC----SSCCCCCEECSSSCEEEEE
T ss_pred EEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE--CCcE----EECCCeEEE----eC----cCCccCCEeCCCCCEEEEE
Confidence 34577889999988777788899999999976 3333 577888643 11 223333444 56677665
Q ss_pred E
Q psy1122 104 L 104 (150)
Q Consensus 104 i 104 (150)
+
T Consensus 192 ~ 192 (195)
T 2q1z_B 192 A 192 (195)
T ss_dssp E
T ss_pred E
Confidence 4
No 123
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=80.95 E-value=6.3 Score=29.88 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=39.5
Q ss_pred HHHHHhceEEeecCCceEEecC-CccceeEEEeeceEEE--EecCCc-EE-EEecCCCee
Q psy1122 21 HDLVLKMKAYIFTPGDLICRKG-EVAREMFIIADGILEV--ISESGR-VL-TTMKAGDFF 75 (150)
Q Consensus 21 ~~l~~~~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~--~~~~g~-~~-~~~~~g~~~ 75 (150)
+.+--.+....+.+|-+.-.-- -..+.+.||++|.+++ ++++|+ .+ ..+.+||+|
T Consensus 354 ~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~ 413 (496)
T 3ksc_A 354 RWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRAL 413 (496)
T ss_dssp HHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred cccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEE
Confidence 3343356778889998775433 3357999999999998 567777 33 469999976
No 124
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=80.30 E-value=6.4 Score=29.58 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=40.0
Q ss_pred HHHHHHhceEEeecCCceEEecCC-ccceeEEEeeceEEE--EecCCc--EEEEecCCCee
Q psy1122 20 LHDLVLKMKAYIFTPGDLICRKGE-VAREMFIIADGILEV--ISESGR--VLTTMKAGDFF 75 (150)
Q Consensus 20 ~~~l~~~~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~--~~~~g~--~~~~~~~g~~~ 75 (150)
++.+--.+....+.+|-+.-.-=. ..+.+.||++|.+++ ++++|+ ....+.+||+|
T Consensus 318 L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~ 378 (466)
T 3kgl_A 318 LRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLL 378 (466)
T ss_dssp HHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred cccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEE
Confidence 334444566778899877744333 357899999999998 567776 45579999976
No 125
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=79.65 E-value=11 Score=25.21 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=35.0
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
.+....+++|..+-.--.+...+++|++|.+.+.- +|. ...+.+|+.+
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~-~~~-~~~l~~Gd~i 82 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV-GDV-TRKMTALESA 82 (243)
T ss_dssp EEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE-TTE-EEEEETTTCE
T ss_pred EEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE-CCE-EEEECCCCEE
Confidence 34455689998776555667889999999999865 333 3678898843
No 126
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=79.51 E-value=7.5 Score=26.45 Aligned_cols=47 Identities=9% Similarity=0.094 Sum_probs=30.7
Q ss_pred eEEeecCCceEEecC--CccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKG--EVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g--~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|...-... ...+.+++|++|.+.+.- +|+ ...+.+||.+-
T Consensus 62 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~-~~~-~~~L~~Gd~~~ 110 (261)
T 1rc6_A 62 YLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA-EGK-TFALSEGGYLY 110 (261)
T ss_dssp EEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE-TTE-EEEEETTEEEE
T ss_pred EEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE-CCE-EEEECCCCEEE
Confidence 345667775543221 224679999999999864 333 46889998654
No 127
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=79.46 E-value=9.8 Score=24.32 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=31.2
Q ss_pred EEeecCCceEEe-c-CCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 29 AYIFTPGDLICR-K-GEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 29 ~~~~~~g~~i~~-~-g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
...+++|...-. . ......+++|++|.+.+.- +|+ ...+.+||++-
T Consensus 108 ~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~-~~~-~~~l~~GD~i~ 155 (192)
T 1y9q_A 108 EITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF-DEQ-WHELQQGEHIR 155 (192)
T ss_dssp EEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE-TTE-EEEECTTCEEE
T ss_pred EEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE-CCE-EEEeCCCCEEE
Confidence 446778776542 2 2334689999999999864 333 45899999663
No 128
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=79.43 E-value=3.7 Score=29.84 Aligned_cols=48 Identities=13% Similarity=0.121 Sum_probs=35.5
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|+..-......+.+|||++|.-..+.-+|+ ...+.+||+|-
T Consensus 106 ~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG~-~~~~~~GD~v~ 153 (368)
T 3nw4_A 106 AIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGD-PVRMSRGDLLL 153 (368)
T ss_dssp EEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETTE-EEEEETTCEEE
T ss_pred EEEEECCCCccCceecccceEEEEEecceEEEEECCE-EEEEeCCCEEE
Confidence 4568899998876666678999999999853334554 35788998764
No 129
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=79.34 E-value=9.3 Score=23.97 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=24.9
Q ss_pred CccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 43 EVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 43 ~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
...+.+++|++|.+.+.. +|+ ...+.+||.+-
T Consensus 82 ~~~eE~~yVLeG~~~l~i-~g~-~~~l~~GD~i~ 113 (151)
T 4axo_A 82 LNYDEIDYVIDGTLDIII-DGR-KVSASSGELIF 113 (151)
T ss_dssp CSSEEEEEEEEEEEEEEE-TTE-EEEEETTCEEE
T ss_pred CCCcEEEEEEEeEEEEEE-CCE-EEEEcCCCEEE
Confidence 456789999999999975 554 47899999653
No 130
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=79.34 E-value=11 Score=24.61 Aligned_cols=49 Identities=24% Similarity=0.271 Sum_probs=34.3
Q ss_pred ceEEeecCCceEEecCCc-cceeEEEeeceEEEE--ecC---Cc-EEEEecCCCee
Q psy1122 27 MKAYIFTPGDLICRKGEV-AREMFIIADGILEVI--SES---GR-VLTTMKAGDFF 75 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~--~~~---g~-~~~~~~~g~~~ 75 (150)
+....+++|...-..-.+ .+.+++|++|.+.+. +.+ ++ ....+.+||++
T Consensus 74 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~ 129 (201)
T 1fi2_A 74 MNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETF 129 (201)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEE
T ss_pred EEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEE
Confidence 445678888865433333 479999999999983 222 34 37889999976
No 131
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=79.34 E-value=5.2 Score=27.69 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=30.6
Q ss_pred eEEeecCCceEE-e-cCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 28 KAYIFTPGDLIC-R-KGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 28 ~~~~~~~g~~i~-~-~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
....+++|...- . .......+++|++|.+.+.-. |+ ...+.+||.+
T Consensus 71 ~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~-g~-~~~L~~GD~i 118 (278)
T 1sq4_A 71 YIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQ-GQ-VHAMQPGGYA 118 (278)
T ss_dssp EEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEES-SC-EEEECTTEEE
T ss_pred EEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEEC-CE-EEEECCCCEE
Confidence 355667776551 1 123457899999999998643 33 3578898865
No 132
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=79.03 E-value=12 Score=25.19 Aligned_cols=45 Identities=13% Similarity=0.174 Sum_probs=31.8
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|...-... .+.+++|++|.+.+.- +|+ ...+.+||.+-
T Consensus 53 ~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~-~~~-~~~l~~Gd~~~ 97 (246)
T 1sfn_A 53 FTAEMPAGAQATESV--YQRFAFVLSGEVDVAV-GGE-TRTLREYDYVY 97 (246)
T ss_dssp EEEEECTTCEEECCS--SEEEEEEEEEEEEEEC-SSC-EEEECTTEEEE
T ss_pred EEEEECCCCcCCCCc--eeEEEEEEECEEEEEE-CCE-EEEECCCCEEE
Confidence 355778887654432 6788999999999864 333 36799998654
No 133
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=78.83 E-value=12 Score=25.76 Aligned_cols=48 Identities=21% Similarity=0.315 Sum_probs=35.9
Q ss_pred hceEEeecCCceEEe-cCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICR-KGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
.+....+++|..+-. ........++|++|...+.. +|+ ...+.+||++
T Consensus 192 ~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~-~~~-~~~v~~GD~~ 240 (278)
T 1sq4_A 192 HVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL-NQD-WVEVEAGDFM 240 (278)
T ss_dssp EEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE-TTE-EEEEETTCEE
T ss_pred EEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE-CCE-EEEeCCCCEE
Confidence 445678899998864 44445688999999999864 333 4788999976
No 134
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=78.54 E-value=9.4 Score=28.70 Aligned_cols=55 Identities=13% Similarity=0.242 Sum_probs=39.1
Q ss_pred HHHHHhceEEeecCCceEEecCC-ccceeEEEeeceEEE--EecCCc-E-EEEecCCCee
Q psy1122 21 HDLVLKMKAYIFTPGDLICRKGE-VAREMFIIADGILEV--ISESGR-V-LTTMKAGDFF 75 (150)
Q Consensus 21 ~~l~~~~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~--~~~~g~-~-~~~~~~g~~~ 75 (150)
+.+--.+....+.+|-+.-.-=. ..+.+.||++|.+++ ++++|+ . -..+.+||+|
T Consensus 319 ~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVf 378 (465)
T 3qac_A 319 RHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLV 378 (465)
T ss_dssp HHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred cccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEE
Confidence 34434556778899987754333 357899999999988 566776 3 3469999976
No 135
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=77.85 E-value=7.1 Score=26.18 Aligned_cols=63 Identities=19% Similarity=0.285 Sum_probs=40.1
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEE
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSL 104 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i 104 (150)
....+++|..+-.-..+.....+|++|.+. +++ ..+.+|+++- .. ....++..+.++|.++..
T Consensus 46 ~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d~~----~~~~~Gd~~~----~P----~g~~H~p~a~~gc~~~vk 108 (223)
T 3o14_A 46 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEH----GDYPAGTYVR----NP----PTTSHVPGSAEGCTIFVK 108 (223)
T ss_dssp EEEEECTTEECCCEECTTCEEEEEEEEEEE--ETT----EEEETTEEEE----EC----TTCEECCEESSCEEEEEE
T ss_pred EEEEECCCCCcccccCCCCEEEEEEEeEEE--ECC----eEECCCeEEE----eC----CCCccccEeCCCCEEEEE
Confidence 467889998776666667888999999986 333 3667777532 11 123333445666776654
No 136
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=77.84 E-value=8.6 Score=27.63 Aligned_cols=48 Identities=21% Similarity=0.316 Sum_probs=34.0
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|...-.-......++||++|...+..-+|+ ...+.+||+|-
T Consensus 103 ~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g~-~~~l~~GD~~~ 150 (354)
T 2d40_A 103 GLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGE-RTPMNEGDFIL 150 (354)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTE-EEECCTTCEEE
T ss_pred EEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECCE-EEEEcCCCEEE
Confidence 4567888887644444567999999999876333444 46899999764
No 137
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=77.67 E-value=7 Score=26.85 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=30.6
Q ss_pred eEEeecCCceEEecC--CccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKG--EVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g--~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|...-..- ...+.+.+|++|.+.+.- +|+ ...+.+||.+-
T Consensus 65 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~-~~~-~~~L~~GD~~~ 113 (274)
T 1sef_A 65 YIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD-GQE-THELEAGGYAY 113 (274)
T ss_dssp EEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC-SSC-EEEEETTEEEE
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE-CCE-EEEECCCCEEE
Confidence 345677776543221 124679999999999864 333 36789998654
No 138
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=77.48 E-value=13 Score=28.22 Aligned_cols=66 Identities=11% Similarity=0.033 Sum_probs=46.3
Q ss_pred HHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEE--EecC-Cc---------------------EEEEecCCC
Q psy1122 18 EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEV--ISES-GR---------------------VLTTMKAGD 73 (150)
Q Consensus 18 ~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~--~~~~-g~---------------------~~~~~~~g~ 73 (150)
..++.+--.+....+++|..+.+.-...+.++||++|...+ +.++ .. .+..+.+||
T Consensus 39 ~~L~~~gvs~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GD 118 (496)
T 3ksc_A 39 KQFRCAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGD 118 (496)
T ss_dssp HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTE
T ss_pred hhhccCCceEEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCC
Confidence 35555555667789999998877777889999999999876 3332 11 256899999
Q ss_pred ee----eeeeeecc
Q psy1122 74 FF----GEIGILNL 83 (150)
Q Consensus 74 ~~----g~~~~~~~ 83 (150)
+| |...++.+
T Consensus 119 V~viPaG~~h~~~N 132 (496)
T 3ksc_A 119 IIAVPTGIVFWMYN 132 (496)
T ss_dssp EEEECTTCEEEEEE
T ss_pred EEEECCCCcEEEEc
Confidence 87 44444444
No 139
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=77.19 E-value=15 Score=25.17 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=33.5
Q ss_pred ceEEeecCCceEEe-cCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 27 MKAYIFTPGDLICR-KGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 27 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
+....+++|..+-. .......+++|++|.+.+.- +|+ ...+.+||++-
T Consensus 184 ~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i-~~~-~~~l~~GD~i~ 232 (274)
T 1sef_A 184 MHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL-DNE-WYPVEKGDYIF 232 (274)
T ss_dssp EEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE-TTE-EEEEETTCEEE
T ss_pred EEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE-CCE-EEEECCCCEEE
Confidence 34557888876633 33356789999999999864 333 46889999653
No 140
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=77.19 E-value=14 Score=25.00 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=32.5
Q ss_pred eEEeecCCceEEe-cCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICR-KGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|..+-. .......+++|++|.+.+.-. |+ ...+.+||++-
T Consensus 182 ~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~-~~-~~~l~~GD~i~ 229 (261)
T 1rc6_A 182 HILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD-NN-WIPVKKGDYIF 229 (261)
T ss_dssp EEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS-SC-EEEEETTCEEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC-CE-EEEeCCCCEEE
Confidence 5667888876532 222357899999999998643 33 36899999653
No 141
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=76.82 E-value=12 Score=24.08 Aligned_cols=30 Identities=17% Similarity=0.359 Sum_probs=23.4
Q ss_pred ceeEEEeeceEEEEec--CCc-EEEEecCCCee
Q psy1122 46 REMFIIADGILEVISE--SGR-VLTTMKAGDFF 75 (150)
Q Consensus 46 ~~~y~i~~G~v~~~~~--~g~-~~~~~~~g~~~ 75 (150)
..+++|++|.+.+.-. .|+ ....+.+||++
T Consensus 97 ~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v 129 (190)
T 1x82_A 97 AEVYVALKGKGGMLLQTPEGDAKWISMEPGTVV 129 (190)
T ss_dssp CEEEEEEESCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEE
Confidence 5899999999998532 355 56789999965
No 142
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=75.39 E-value=16 Score=27.59 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=31.3
Q ss_pred HHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEE
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEV 58 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 58 (150)
.+..+--.+....+++|..+...-.+...++||++|...+
T Consensus 39 ~l~~~gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~v 78 (493)
T 2d5f_A 39 ELQCAGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAI 78 (493)
T ss_dssp HHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEE
T ss_pred hhccCCEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEE
Confidence 4444444567789999999877666788999999999987
No 143
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=75.31 E-value=10 Score=22.29 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=45.9
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEccee--EEEEEc
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYA--ELFSLS 105 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~--~~~~i~ 105 (150)
....+++|...-.--.....+++|++|.+.+.-. |+ ...+.+|+++- +..+ .........-+++ .++.++
T Consensus 37 ~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~-~~-~~~l~~Gd~~~----i~~~--~~H~~~~~~~~~~~~~~i~f~ 108 (128)
T 4i4a_A 37 AWCIVRPETKSFRHSHNEYELFIVIQGNAIIRIN-DE-DFPVTKGDLII----IPLD--SEHHVINNNQEDFHFYTIWWD 108 (128)
T ss_dssp EEEEECTTEECCCBCCSSEEEEEEEESEEEEEET-TE-EEEEETTCEEE----ECTT--CCEEEEECSSSCEEEEEEEEC
T ss_pred EEEEECCCCccCCEecCCeEEEEEEeCEEEEEEC-CE-EEEECCCcEEE----ECCC--CcEEeEeCCCCCEEEEEEEEC
Confidence 4556677764433334567899999999998643 33 46788988653 3221 2222222223333 355677
Q ss_pred HHHHHHHHhh
Q psy1122 106 REDVLSAMKD 115 (150)
Q Consensus 106 ~~~~~~l~~~ 115 (150)
.+.+..++..
T Consensus 109 ~~~~~~~~~~ 118 (128)
T 4i4a_A 109 KESTLNFLTR 118 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7766665543
No 144
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=74.87 E-value=14 Score=28.17 Aligned_cols=40 Identities=10% Similarity=-0.056 Sum_probs=31.5
Q ss_pred HHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEE
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEV 58 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 58 (150)
.+...--.+....+.+|..+...-.....++||++|...+
T Consensus 42 ~l~~~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~ 81 (510)
T 3c3v_A 42 EFECAGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYF 81 (510)
T ss_dssp HHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEE
T ss_pred ccccCcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEE
Confidence 4444444566779999999887777788999999999887
No 145
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=74.04 E-value=18 Score=26.27 Aligned_cols=74 Identities=20% Similarity=0.325 Sum_probs=49.0
Q ss_pred EeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcHHHH
Q psy1122 30 YIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSREDV 109 (150)
Q Consensus 30 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 109 (150)
..+++|+..-.....+..+|+|++|.-...- +|+ .....+||.|..-+. ..++..+.+++.++.++-.-+
T Consensus 284 ~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I-~~~-~~~w~~gD~fvvP~w--------~~h~~~n~~~a~Lf~~~D~Pl 353 (368)
T 3nw4_A 284 HRLRAGTETATRNEVGSTVFQVFEGAGAVVM-NGE-TTKLEKGDMFVVPSW--------VPWSLQAETQFDLFRFSDAPI 353 (368)
T ss_dssp EEECTTCBCCCEEESSCEEEEEEESCEEEEE-TTE-EEEECTTCEEEECTT--------CCEEEEESSSEEEEEEESHHH
T ss_pred EEECCCCccCCeeccccEEEEEEeCcEEEEE-CCE-EEEecCCCEEEECCC--------CcEEEEeCCCEEEEEEeCHHH
Confidence 3445665554445667789999999988753 333 467899998753222 233445668999999887766
Q ss_pred HHHH
Q psy1122 110 LSAM 113 (150)
Q Consensus 110 ~~l~ 113 (150)
.+.+
T Consensus 354 ~~~L 357 (368)
T 3nw4_A 354 MEAL 357 (368)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6544
No 146
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=73.72 E-value=22 Score=25.48 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=44.6
Q ss_pred EEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcHHH
Q psy1122 29 AYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSRED 108 (150)
Q Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 108 (150)
...+++|...-.--.+...+|+|++|..++.- +| ....+.+||+|..-.. ..+++.+.+++.++++.-.-
T Consensus 272 ~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v-~~-~~~~~~~GD~~~vP~~--------~~H~~~n~e~~~l~~~~d~p 341 (354)
T 2d40_A 272 LQLLPKGFASRVARTTDSTIYHVVEGSGQVII-GN-ETFSFSAKDIFVVPTW--------HGVSFQTTQDSVLFSFSDRP 341 (354)
T ss_dssp EEEECTTCBCCCBEESSCEEEEEEEEEEEEEE-TT-EEEEEETTCEEEECTT--------CCEEEEEEEEEEEEEEESHH
T ss_pred EEEECCCCCCCceecCCcEEEEEEeCeEEEEE-CC-EEEEEcCCCEEEECCC--------CeEEEEeCCCEEEEEEcCHH
Confidence 33445554443333456689999999999853 33 4578999997653222 12223334778888876554
Q ss_pred HHHH
Q psy1122 109 VLSA 112 (150)
Q Consensus 109 ~~~l 112 (150)
+.+.
T Consensus 342 ~~~~ 345 (354)
T 2d40_A 342 VQEA 345 (354)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 147
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=73.52 E-value=8.1 Score=23.02 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=23.2
Q ss_pred cceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 45 AREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 45 ~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
...+++|++|.+.+.-.+++ ...+.+|+++
T Consensus 64 ~~E~~~vl~G~~~~~~~~~~-~~~l~~Gd~~ 93 (134)
T 2o8q_A 64 GFQLFYVLRGWVEFEYEDIG-AVMLEAGGSA 93 (134)
T ss_dssp SCEEEEEEESEEEEEETTTE-EEEEETTCEE
T ss_pred CcEEEEEEeCEEEEEECCcE-EEEecCCCEE
Confidence 37899999999998654433 4688999865
No 148
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=71.42 E-value=28 Score=25.58 Aligned_cols=51 Identities=14% Similarity=0.173 Sum_probs=36.0
Q ss_pred hceEEeecCCceEEecCC-ccceeEEEeeceEEE--Eec------CCc--EEEEecCCCeee
Q psy1122 26 KMKAYIFTPGDLICRKGE-VAREMFIIADGILEV--ISE------SGR--VLTTMKAGDFFG 76 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~--~~~------~g~--~~~~~~~g~~~g 76 (150)
.+....+.+|.+.-.--. ..+.+++|++|..++ ..+ +|. ....+.+||+|-
T Consensus 240 s~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~v 301 (397)
T 2phl_A 240 LISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFV 301 (397)
T ss_dssp EEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEE
T ss_pred eEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEE
Confidence 345567788876654333 367999999999987 455 453 677899999763
No 149
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=70.37 E-value=28 Score=26.16 Aligned_cols=40 Identities=15% Similarity=0.041 Sum_probs=31.0
Q ss_pred HHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEE
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEV 58 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 58 (150)
.+...--.+....+.+|-.+.+.-.....++||++|...+
T Consensus 44 ~l~~~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~ 83 (465)
T 3qac_A 44 EFRCAGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGIT 83 (465)
T ss_dssp HHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEE
T ss_pred hhcccceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEE
Confidence 4444444556678899988887777889999999999876
No 150
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=70.24 E-value=18 Score=25.27 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=32.9
Q ss_pred eEEeecCCceEEecCCc-cceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 28 KAYIFTPGDLICRKGEV-AREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
....+++|...-..-.. ...++||++|.+.+.- +|+ ...+.+||++-
T Consensus 49 ~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-~~~-~~~l~~Gd~~~ 96 (337)
T 1y3t_A 49 VLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL-DGE-RYLLISGDYAN 96 (337)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE-TTE-EEEECTTCEEE
T ss_pred EEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE-CCE-EEEECCCCEEE
Confidence 34577888766333333 7889999999999864 344 36899998653
No 151
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=68.19 E-value=34 Score=25.38 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=38.9
Q ss_pred HHHHHHHhceEEeecCCceEEecCC-ccceeEEEeeceEEE--EecCC----------c----EEEEecCCCee
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKGE-VAREMFIIADGILEV--ISESG----------R----VLTTMKAGDFF 75 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~--~~~~g----------~----~~~~~~~g~~~ 75 (150)
.++.+--.+....+.+|.+.-.--. ..+.+++|++|.+++ ..++| . ....+.+||+|
T Consensus 260 ~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~ 333 (434)
T 2ea7_A 260 QLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVF 333 (434)
T ss_dssp HHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEE
T ss_pred cccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEE
Confidence 3444444566889999987754333 357999999999987 34433 2 23478999976
No 152
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=66.54 E-value=17 Score=26.02 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=25.1
Q ss_pred CCccceeEEEeeceEEEE-ec-CCc-EEEEecCCCee
Q psy1122 42 GEVAREMFIIADGILEVI-SE-SGR-VLTTMKAGDFF 75 (150)
Q Consensus 42 g~~~~~~y~i~~G~v~~~-~~-~g~-~~~~~~~g~~~ 75 (150)
......+++|++|.+.+. .. +|. ....+.+||++
T Consensus 68 H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v 104 (350)
T 1juh_A 68 HQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYG 104 (350)
T ss_dssp CSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEE
T ss_pred CCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEE
Confidence 333578899999999984 32 444 56789999965
No 153
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=65.65 E-value=12 Score=25.41 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=27.0
Q ss_pred CCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 34 PGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 34 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
.|+-.. ..-+.+.+.+|++|.+.+.. +|.. ..+.+||.+
T Consensus 55 ~g~~~v-~~~p~dE~~~VleG~~~lt~-~g~~-~~~~~Gd~~ 93 (238)
T 3myx_A 55 GTALSV-EAYPYTEMLVMHRGSVTLTS-GTDS-VTLSTGESA 93 (238)
T ss_dssp CSEEEE-SSCSSEEEEEEEESEEEEEE-TTEE-EEEETTCEE
T ss_pred cccccc-ccCCCcEEEEEEEeEEEEEC-CCeE-EEEcCCCEE
Confidence 444443 23446899999999999976 4543 458888865
No 154
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=64.37 E-value=32 Score=23.71 Aligned_cols=49 Identities=14% Similarity=0.259 Sum_probs=36.6
Q ss_pred hceEEeecCCceEE-ecCCccceeEEEeeceEEEEecCCcEEEEecCCCeee
Q psy1122 26 KMKAYIFTPGDLIC-RKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFG 76 (150)
Q Consensus 26 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g 76 (150)
.+...+|++|..+= .+-..-.+.++|++|...+..++ + ...+.+||++-
T Consensus 187 ~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~-~-~~~V~~GD~i~ 236 (266)
T 4e2q_A 187 NIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGD-N-WYPVQAGDVIW 236 (266)
T ss_dssp EEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETT-E-EEEEETTCEEE
T ss_pred EEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECC-E-EEEecCCCEEE
Confidence 34567899999884 46666779999999999876433 2 56788988653
No 155
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=63.17 E-value=43 Score=24.69 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=39.2
Q ss_pred HHHHHHHhceEEeecCCceEEecC-CccceeEEEeeceEEE--EecCC--------------c-EEEEecCCCee
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKG-EVAREMFIIADGILEV--ISESG--------------R-VLTTMKAGDFF 75 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~--~~~~g--------------~-~~~~~~~g~~~ 75 (150)
.++.+--.+....+.+|.+...-- -..+.+++|++|..++ ..++| + ....+.+||+|
T Consensus 243 ~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~ 317 (416)
T 1uij_A 243 QLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVF 317 (416)
T ss_dssp HHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEE
T ss_pred cchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEE
Confidence 344444456688899998876543 3368999999999987 45554 2 33489999976
No 156
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=62.72 E-value=31 Score=23.00 Aligned_cols=43 Identities=12% Similarity=0.271 Sum_probs=30.9
Q ss_pred hceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 26 KMKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 26 ~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
......+++|..+-........+ ||++|.+. +++ ..+.+|+|+
T Consensus 147 ~v~l~r~~~G~~~~~~~hgG~Ei-lVL~G~~~--d~~----~~~~~GsWl 189 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VND----EVLGRNAWL 189 (223)
T ss_dssp EEEEEEECTTCEEEECCSSCEEE-EEEEEEEE--ETT----EEECTTEEE
T ss_pred EEEEEEECCCCccCCCCCCcEEE-EEEEeEEE--ECC----ceECCCeEE
Confidence 34567889999998777644554 99999986 333 367777763
No 157
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=60.37 E-value=41 Score=23.52 Aligned_cols=69 Identities=12% Similarity=0.105 Sum_probs=50.1
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEcH
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLSR 106 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 106 (150)
.++.-|.+|+....+... +-++.+++|...+.- +|. ...+.+||.+ ++. ....++..+.++|.++.+..
T Consensus 209 teV~l~G~Ges~~~~~~~-d~wiWqLEGss~Vt~-~~q-~~~L~~~DsL----LIp----a~~~y~~~r~~gsv~L~I~~ 277 (286)
T 2qnk_A 209 TQVIAYGQGSSEGLRQNV-DVWLWQLEGSSVVTM-GGR-RLSLAPDDSL----LVL----AGTSYAWERTQGSVALSVTQ 277 (286)
T ss_dssp EEEEEECSEEEEECCCSS-CEEEEEEESCEEEEE-TTE-EEEECTTEEE----EEC----TTCCEEEEECTTCEEEEEEE
T ss_pred eEEEEEcCCccccccCcC-cEEEEEEcCceEEEE-CCe-EEeccCCCEE----Eec----CCCeEEEEecCCeEEEEEEE
Confidence 356678999999888887 888899999997653 333 3567777733 232 45677788889999888753
No 158
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=52.89 E-value=17 Score=26.04 Aligned_cols=70 Identities=13% Similarity=0.052 Sum_probs=44.0
Q ss_pred CCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcce-eEEEEEcH--HHHH
Q psy1122 34 PGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGY-AELFSLSR--EDVL 110 (150)
Q Consensus 34 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~-~~~~~i~~--~~~~ 110 (150)
+|+.+-.-..+.+.+++|++|.+.+.-.+.+ ...+.+|+.|- +. ...++++.+.++ ..++.+.. +.+.
T Consensus 261 ~g~~~~~h~~~~~~~~~vleG~~~i~i~g~~-~~~l~~Gd~~~----iP----ag~~h~~~~~~~~~~~l~~~~g~~g~~ 331 (350)
T 1juh_A 261 STVTVPTWSFPGACAFQVQEGRVVVQIGDYA-ATELGSGDVAF----IP----GGVEFKYYSEAYFSKVLFVSSGSDGLD 331 (350)
T ss_dssp TTSCCCCBCCSSCEEEEEEESCEEEEETTSC-CEEECTTCEEE----EC----TTCCEEEEESSSSEEEEEEEESSSSHH
T ss_pred CCCCCCcccCCCcEEEEEEeeEEEEEECCeE-EEEeCCCCEEE----EC----CCCCEEEEecCCeEEEEEEecCccchh
Confidence 3556655556778999999999998643313 36899998653 32 234445555544 66666654 4444
Q ss_pred HH
Q psy1122 111 SA 112 (150)
Q Consensus 111 ~l 112 (150)
..
T Consensus 332 ~~ 333 (350)
T 1juh_A 332 QN 333 (350)
T ss_dssp HH
T ss_pred he
Confidence 44
No 159
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=51.13 E-value=12 Score=25.25 Aligned_cols=46 Identities=13% Similarity=0.118 Sum_probs=28.9
Q ss_pred EeecCCceEE-ecCCccceeEEEeeceEEEEe--------cCC---------c-EEEEecCCCee
Q psy1122 30 YIFTPGDLIC-RKGEVAREMFIIADGILEVIS--------ESG---------R-VLTTMKAGDFF 75 (150)
Q Consensus 30 ~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~--------~~g---------~-~~~~~~~g~~~ 75 (150)
..+++|...- ......+.+++|++|.+.+.- .+. + ....+.+||++
T Consensus 48 ~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i 112 (239)
T 2xlg_A 48 AQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLI 112 (239)
T ss_dssp EEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEE
T ss_pred EEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEE
Confidence 3556665431 222235679999999999853 222 1 26789999865
No 160
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=48.91 E-value=58 Score=24.27 Aligned_cols=57 Identities=21% Similarity=0.325 Sum_probs=39.1
Q ss_pred HHHHHHHhceEEeecCCceEEecC-CccceeEEEeeceEEE--EecCC---------c---EEEEecCCCee
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKG-EVAREMFIIADGILEV--ISESG---------R---VLTTMKAGDFF 75 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~--~~~~g---------~---~~~~~~~g~~~ 75 (150)
.++.+--.+....+.+|-+.-.-= -..+.+.+|++|.+++ +.++| + ....+.+||+|
T Consensus 275 ~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~ 346 (445)
T 2cav_A 275 QLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDII 346 (445)
T ss_dssp HHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEE
T ss_pred ccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEE
Confidence 444454566788999998775433 3458999999999887 45543 2 45668999977
No 161
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=48.36 E-value=47 Score=21.35 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=29.1
Q ss_pred ccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEE
Q psy1122 9 VTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFI 50 (150)
Q Consensus 9 ~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~ 50 (150)
-|.|.+++..+...++.. ..|+.|+++....+++.+
T Consensus 14 HP~F~n~s~~qAe~~L~~------~~G~~liRPSsk~~~lti 49 (178)
T 2xp1_A 14 HPLFKNFNVTESENYLRS------STDDFLIRKGSRHGYCVL 49 (178)
T ss_dssp STTEECCCHHHHHHHHHH------SSCCEEEEECSSTTEEEE
T ss_pred CCCcCCCCHHHHHHHHhc------CCCCEEEeecCCCCcEEE
Confidence 489999999999888887 249999999888665433
No 162
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=48.07 E-value=24 Score=19.36 Aligned_cols=45 Identities=20% Similarity=0.288 Sum_probs=31.1
Q ss_pred HHHHHHHhceEEeecCCceEEecCCc-cceeEEEeeceEEE--EecCC
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKGEV-AREMFIIADGILEV--ISESG 63 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~--~~~~g 63 (150)
.++.+--.+....+.+|.+.-..-.+ .+.+.+|++|.+.+ +.++|
T Consensus 30 ~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 30 QLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp HHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred ccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 44455456678889999887654444 57899999997766 45544
No 163
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=47.65 E-value=38 Score=22.09 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=23.2
Q ss_pred cceeEEEeeceEEEEecC--CcE-EEEecCCCeee
Q psy1122 45 AREMFIIADGILEVISES--GRV-LTTMKAGDFFG 76 (150)
Q Consensus 45 ~~~~y~i~~G~v~~~~~~--g~~-~~~~~~g~~~g 76 (150)
...++||++|.....-.+ |+. ...+.+|+++-
T Consensus 104 ~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIi 138 (191)
T 1vr3_A 104 DEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMIT 138 (191)
T ss_dssp SCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred cceEEEEEeceEEEEECCCCCeEEEEEECCCCEEE
Confidence 367999999999885333 443 46889999763
No 164
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=46.69 E-value=18 Score=23.29 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=22.7
Q ss_pred cceeEEEeeceEEEE-ecCCcE-EEEecCCCeee
Q psy1122 45 AREMFIIADGILEVI-SESGRV-LTTMKAGDFFG 76 (150)
Q Consensus 45 ~~~~y~i~~G~v~~~-~~~g~~-~~~~~~g~~~g 76 (150)
...++||++|..... ..+|+. -..+.+||++-
T Consensus 100 ~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~ 133 (179)
T 1zrr_A 100 EDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLIS 133 (179)
T ss_dssp SCEEEEEEESCCCCCEECSSCEEEEECCCSCEEE
T ss_pred hheEEEEEcceEEEEEEeCCEEEEEEECCCCEEE
Confidence 357999999998873 334553 35689999773
No 165
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=42.99 E-value=55 Score=24.16 Aligned_cols=58 Identities=21% Similarity=0.293 Sum_probs=39.7
Q ss_pred HHHHHHHhceEEeecCCceEEecCC-ccceeEEEeeceEEE--EecCC-------------------------c-EEEEe
Q psy1122 19 FLHDLVLKMKAYIFTPGDLICRKGE-VAREMFIIADGILEV--ISESG-------------------------R-VLTTM 69 (150)
Q Consensus 19 ~~~~l~~~~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~--~~~~g-------------------------~-~~~~~ 69 (150)
.++.+--.+....+.+|-+.-.--. .++.+.+|++|...+ +.+++ + ....+
T Consensus 257 ~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 336 (418)
T 3s7i_A 257 QLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARL 336 (418)
T ss_dssp HHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEE
T ss_pred hhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeee
Confidence 3444444566778899987765443 367899999999887 33322 2 46889
Q ss_pred cCCCeee
Q psy1122 70 KAGDFFG 76 (150)
Q Consensus 70 ~~g~~~g 76 (150)
.+||+|-
T Consensus 337 ~~GDV~v 343 (418)
T 3s7i_A 337 KEGDVFI 343 (418)
T ss_dssp CTTCEEE
T ss_pred CCCCEEE
Confidence 9999874
No 166
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=41.47 E-value=21 Score=22.56 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=23.0
Q ss_pred CCccceeEEEee--ceEEEEecCCcEEEEecCCCee
Q psy1122 42 GEVAREMFIIAD--GILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 42 g~~~~~~y~i~~--G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
......+|+|++ |.+.+.- +|+ ...+.+|+++
T Consensus 63 H~~~~E~~yVLe~~G~g~v~i-dge-~~~l~~GD~v 96 (157)
T 4h7l_A 63 HREHQEIYVVLDHAAHATIEL-NGQ-SYPLTKLLAI 96 (157)
T ss_dssp CSSCEEEEEEEEECTTCEEEE-TTE-EEECCTTEEE
T ss_pred CCCCcEEEEEEecCcEEEEEE-CCE-EEEeCCCCEE
Confidence 344568999999 9998864 344 3678888855
No 167
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=38.95 E-value=30 Score=21.89 Aligned_cols=32 Identities=13% Similarity=0.039 Sum_probs=26.5
Q ss_pred ceEEeecCCceEEecCCccceeEEEeeceEEE
Q psy1122 27 MKAYIFTPGDLICRKGEVAREMFIIADGILEV 58 (150)
Q Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 58 (150)
.....|++|..+-.-..+.....+|++|.+..
T Consensus 45 v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~ 76 (165)
T 3cjx_A 45 VMRASFAPGLTLPLHFHTGTVHMYTISGCWYY 76 (165)
T ss_dssp EEEEEECTTCBCCEEEESSCEEEEEEESEEEE
T ss_pred EEEEEECCCCcCCcccCCCCEEEEEEEEEEEE
Confidence 45778999988877677788899999999985
No 168
>3e9v_A Protein BTG2; B-cell translocation gene 2, structural genomics, PSI- 2, protein structure initiative; 1.70A {Homo sapiens} SCOP: d.370.1.1 PDB: 3dju_B 3djn_B
Probab=36.63 E-value=69 Score=19.20 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=31.2
Q ss_pred ccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeec
Q psy1122 11 IFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADG 54 (150)
Q Consensus 11 ~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G 54 (150)
.-++++.+++...+..--..-.+||++-++-|+. ..+.++-+|
T Consensus 76 ~~sgl~~~~l~~~LP~eltlWvDPgeVs~R~GE~-g~i~vly~~ 118 (120)
T 3e9v_A 76 SQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGED-GSICVLYEE 118 (120)
T ss_dssp HHTTCCHHHHHHHSCTTEEEEEETTEEEEEESTT-SCEEEEEEC
T ss_pred HHhCCCHHHHHHhCCcccEEEECCCEEEEEecCC-CeEEEEecC
Confidence 3356777777777776677788999999999995 355555544
No 169
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=33.68 E-value=47 Score=20.01 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=19.1
Q ss_pred CccceeEEEeeceEEEEecCCcEEEEecCCCee
Q psy1122 43 EVAREMFIIADGILEVISESGRVLTTMKAGDFF 75 (150)
Q Consensus 43 ~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~ 75 (150)
...-.+.++++|...+.- +|+ ...+.+|+++
T Consensus 36 h~~~~i~~v~~G~~~~~i-~~~-~~~l~~Gd~~ 66 (164)
T 2arc_A 36 MKGYILNLTIRGQGVVKN-QGR-EFVCRPGDIL 66 (164)
T ss_dssp CSSEEEEEEEEECEEEEE-TTE-EEEECTTCEE
T ss_pred CCceEEEEEEEeEEEEEE-CCE-EEEecCCeEE
Confidence 344568899999998853 222 2455666543
No 170
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=30.92 E-value=1.3e+02 Score=20.55 Aligned_cols=67 Identities=7% Similarity=0.053 Sum_probs=40.6
Q ss_pred EeecCCceEEecCCccceeEEEeeceEEEEecCCcEEEEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEEEc
Q psy1122 30 YIFTPGDLICRKGEVAREMFIIADGILEVISESGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFSLS 105 (150)
Q Consensus 30 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~i~ 105 (150)
..+++|+.+-.+-.....+.+|++|.+.+-..++. ...+.+|+.+. +.+ ....++.|.++++++.++
T Consensus 187 ~~L~~g~~~~~~~~~~~~~l~v~~G~v~v~g~~~~-~~~l~~gd~~~----l~~----~~~l~l~a~~~a~~LL~d 253 (256)
T 2vec_A 187 IVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEE-KAALTCGDGAF----IRD----EANITLVADSPLRALLID 253 (256)
T ss_dssp EEECTTCEEEEECSSSEEEEEEEESCEEEEETTEE-EEEECTTCEEE----EES----CSEEEEEESSSEEEEEEE
T ss_pred EEECCCCEEEEecCCCeEEEEEEECEEEECCcccc-ceEECCCCEEE----ECC----CCeEEEEeCCCCEEEEEE
Confidence 46778877755443333566678999887432211 23477777543 222 234567778888888875
No 171
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=28.26 E-value=1e+02 Score=18.65 Aligned_cols=44 Identities=9% Similarity=0.309 Sum_probs=27.9
Q ss_pred eeEEEeeceEEEE--ecCCc----EEEEecCCCeeeeeeeeccCCCCceeeEEEEcce
Q psy1122 47 EMFIIADGILEVI--SESGR----VLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGY 98 (150)
Q Consensus 47 ~~y~i~~G~v~~~--~~~g~----~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~ 98 (150)
..+.|++|.++.+ +++|. ......+|+. ..+. +..-..+.++++
T Consensus 41 g~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~----~~i~----Pq~wH~Ve~lsd 90 (127)
T 3bb6_A 41 PRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQF----AVFP----PEKWHNIEAMTD 90 (127)
T ss_dssp EEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBE----EECC----SSCEEEEEESST
T ss_pred EEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCc----eEEC----CCCcEEEEEcCC
Confidence 5788999999884 45553 3445555553 3443 456777887555
No 172
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=27.44 E-value=2e+02 Score=21.66 Aligned_cols=41 Identities=15% Similarity=0.032 Sum_probs=32.9
Q ss_pred HHHHHHHHhceEEeecCCceEEecCCccceeEEEeeceEEE
Q psy1122 18 EFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGILEV 58 (150)
Q Consensus 18 ~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 58 (150)
..++.+--.+....+++|-.+...-.+...++||++|...+
T Consensus 36 ~~L~~~gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~ 76 (466)
T 3kgl_A 36 PQLRCSGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLM 76 (466)
T ss_dssp HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEE
T ss_pred hhhccCCeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEE
Confidence 45555544566789999999988777899999999999876
No 173
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=26.51 E-value=80 Score=19.76 Aligned_cols=31 Identities=13% Similarity=0.267 Sum_probs=26.0
Q ss_pred eEEeecCCceEEecCCccceeEEEeeceEEE
Q psy1122 28 KAYIFTPGDLICRKGEVAREMFIIADGILEV 58 (150)
Q Consensus 28 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~ 58 (150)
...+|++|..+=.-..+....++|++|....
T Consensus 49 ~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~ 79 (153)
T 3bal_A 49 AIFNCPAGSSFASHIHAGPGEYFLTKGKMEV 79 (153)
T ss_dssp EEEEECTTEEECCEEESSCEEEEEEESEEEE
T ss_pred EEEEeCCCCCccCccCCCCEEEEEEEEEEEe
Confidence 4668999988877777788899999999975
No 174
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=23.19 E-value=1.6e+02 Score=19.12 Aligned_cols=47 Identities=6% Similarity=0.024 Sum_probs=32.4
Q ss_pred EEecCCCeeeeeeeeccCCCCceeeEEEEcceeEEEE--EcHHHHHHHHhhC
Q psy1122 67 TTMKAGDFFGEIGILNLDGLNKRTADVRSVGYAELFS--LSREDVLSAMKDY 116 (150)
Q Consensus 67 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~--i~~~~~~~l~~~~ 116 (150)
..++.|.++|..+.+.. .--+.++.+..|+.+.. ++.+....+.+..
T Consensus 138 v~IG~gavIgagsvV~~---dVp~~~vv~G~PAk~ir~r~~~~~i~~l~~~~ 186 (220)
T 4hur_A 138 VKIGDGAIIAAEAVVTK---NVAPYSIVGGNPLKFIRKRFSDGVIEEWLALQ 186 (220)
T ss_dssp CEECTTCEECTTCEECS---CBCTTEEEETTTTEEEEESSCHHHHHHHHHHC
T ss_pred CEECCCCEEcCCCEEcc---cCCCCcEEeCCCCEeehhcCCHHHHHHHHHhh
Confidence 35677777777777765 33456777888888876 6777777666544
No 175
>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B
Probab=21.92 E-value=1.4e+02 Score=18.07 Aligned_cols=48 Identities=6% Similarity=-0.076 Sum_probs=34.0
Q ss_pred ccccccccCCHHHHHHHHHhceEEeecCCceEEecCCccceeEEEeece
Q psy1122 7 GVVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVAREMFIIADGI 55 (150)
Q Consensus 7 ~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~ 55 (150)
.+...-++++.+++..++..--..-.+||++-++-|+. ..+..|-.|.
T Consensus 76 ~~Aa~~sGl~~~dl~~~LP~eltlWvDPgeVs~R~ge~-g~i~~l~~~~ 123 (130)
T 2z15_A 76 EQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEK-GPVKVLYVDD 123 (130)
T ss_dssp HHHHHTTTCCHHHHHHHSCTTEEEEEETTEEEEEESTT-SCEEEEEECC
T ss_pred HHHHHHhCCCHHHHHHhCCccCEEEECCCEEEEEEcCC-CcEEEEeeCC
Confidence 33344567778888887777777888999999999985 4455555444
No 176
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES; 1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A 2l3t_A 3gxw_A 3gxx_A
Probab=21.58 E-value=1.8e+02 Score=19.05 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=28.7
Q ss_pred cccccccCCHHHHHHHHHhceEEeecCCceEEecCCcc-cee
Q psy1122 8 VVTIFQECQPEFLHDLVLKMKAYIFTPGDLICRKGEVA-REM 48 (150)
Q Consensus 8 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~-~~~ 48 (150)
..|.|..++-.+..+.+.. -+.||.|+++...+ +++
T Consensus 7 ~HP~F~n~~~~qAe~~L~~-----~~~Ge~iIRPSSkg~dhL 43 (197)
T 3or8_A 7 NHPYYFPFNGKQAEDYLRS-----KERGDFVIRQSSRGDDHL 43 (197)
T ss_dssp CCTTEECCCHHHHHHHHTT-----SCTTCEEEEECSSCTTEE
T ss_pred CCCCcCCCCHHHHHHHHhc-----CCCCCEEEeeCCCCCCcE
Confidence 3589999999998888875 37899999988874 444
No 177
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=21.42 E-value=1.5e+02 Score=18.13 Aligned_cols=74 Identities=9% Similarity=0.066 Sum_probs=44.3
Q ss_pred eecCCceE-EecCCccceeEEEeeceEEEEecCCc--EEEEecCCCeeeeeeeeccCCCCceeeEEEEcc-eeEEEEEcH
Q psy1122 31 IFTPGDLI-CRKGEVAREMFIIADGILEVISESGR--VLTTMKAGDFFGEIGILNLDGLNKRTADVRSVG-YAELFSLSR 106 (150)
Q Consensus 31 ~~~~g~~i-~~~g~~~~~~y~i~~G~v~~~~~~g~--~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~a~~-~~~~~~i~~ 106 (150)
.+++|.+. +........+++.++|.+++.-.||+ ....+.+... | +.-+ .-.-.+..+.+ +|.++.+..
T Consensus 41 ~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~-g---L~Ip---pgvWh~~~~~s~~avllvlas 113 (141)
T 2pa7_A 41 DTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAV-G---LYVG---PAVWHEMHDFSSDCVMMVLAS 113 (141)
T ss_dssp SCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTE-E---EEEC---TTCEEEEECCCTTCEEEEEES
T ss_pred ecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCc-E---EEeC---CCEEEEEEEcCCCeEEEEECC
Confidence 34566654 44455678999999999999766776 3344555442 1 2221 22233444443 488888877
Q ss_pred HHHHH
Q psy1122 107 EDVLS 111 (150)
Q Consensus 107 ~~~~~ 111 (150)
..+..
T Consensus 114 ~~Yd~ 118 (141)
T 2pa7_A 114 DYYDE 118 (141)
T ss_dssp SCCCG
T ss_pred CCcCH
Confidence 76654
No 178
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=21.17 E-value=2.2e+02 Score=19.87 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=23.2
Q ss_pred eeEEEeeceEEEE-ecCCc-EEEEecCCCeeeeeeee
Q psy1122 47 EMFIIADGILEVI-SESGR-VLTTMKAGDFFGEIGIL 81 (150)
Q Consensus 47 ~~y~i~~G~v~~~-~~~g~-~~~~~~~g~~~g~~~~~ 81 (150)
-=|||++|.+.+- ..-++ ...++.+|...|....+
T Consensus 113 ~E~fVL~G~i~~G~~~l~~h~Y~f~PaGV~~~~~kv~ 149 (303)
T 2qdr_A 113 LEIFVIKGAIQLGEWQLNKHSYSFIPAGVRIGSWKVL 149 (303)
T ss_dssp EEEEEEESEEEETTEEECTTEEEEECTTCCBCCEEEE
T ss_pred eEEEEEEeEEEeCCEEecCCceEEecCCCccCceeec
Confidence 3499999999972 11222 56777777766666664
Done!