BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11220
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULD0|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens
GN=OGDHL PE=1 SV=3
Length = 1010
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 81/91 (89%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct: 300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct: 360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390
>sp|Q5R9L8|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii
GN=OGDHL PE=2 SV=2
Length = 1010
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 81/91 (89%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct: 300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct: 360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390
>sp|Q68EW0|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis
GN=ogdhl PE=2 SV=1
Length = 1018
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK L+QIF QF LEA+D+GSGDVKYHLG Y ER+NR TNK I L++VA
Sbjct: 308 GRLNVLANVIRKDLDQIFCQFDPKLEASDEGSGDVKYHLGMYHERINRATNKKITLSLVA 367
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEAVDPVVQGKT+AEQFYRGD EG K+
Sbjct: 368 NPSHLEAVDPVVQGKTKAEQFYRGDTEGNKV 398
>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis
GN=ogdh PE=2 SV=1
Length = 1021
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEA D+GSGDVKYHLG Y R+NRVT++NI L++VA
Sbjct: 312 GRLNVLANVIRKELEQIFCQFDSKLEATDEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 371
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVVQGKT+AEQFY GD EGKK+
Sbjct: 372 NPSHLEAADPVVQGKTKAEQFYCGDTEGKKV 402
>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH
PE=2 SV=1
Length = 1023
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH
PE=2 SV=1
Length = 1023
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=OGDH PE=2 SV=1
Length = 1023
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH
PE=1 SV=3
Length = 1023
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh
PE=1 SV=3
Length = 1023
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEAAD+GSGD+KYHLG Y R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDRNITLSLVA 372
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ogdh PE=1 SV=1
Length = 1023
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVLANV RK LEQIF QF + LEAAD+GSGD+KYHLG Y R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDRNITLSLVA 372
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
>sp|O61199|ODO1_CAEEL 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
elegans GN=T22B11.5 PE=1 SV=2
Length = 1029
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 71/84 (84%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
GRLNVLANVCR+PL I +QF+ LE AD+GSGDVKYHLG IERLNR + KN+++AVVAN
Sbjct: 318 GRLNVLANVCRQPLATILSQFSTLEPADEGSGDVKYHLGVCIERLNRQSQKNVKIAVVAN 377
Query: 69 PSHLEAVDPVVQGKTRAEQFYRGD 92
PSHLEAVDPVV GK RAE FY GD
Sbjct: 378 PSHLEAVDPVVMGKVRAEAFYAGD 401
>sp|Q623T0|ODO1_CAEBR 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
briggsae GN=CBG01737 PE=3 SV=1
Length = 1027
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 71/84 (84%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
GRLNVLANVCR+PL I +QF+ LE AD+GSGDVKYHLG IERLNR + KN+++AVVAN
Sbjct: 316 GRLNVLANVCRQPLATILSQFSTLEPADEGSGDVKYHLGVCIERLNRQSQKNVKIAVVAN 375
Query: 69 PSHLEAVDPVVQGKTRAEQFYRGD 92
PSHLEAVDPVV GK RAE FY GD
Sbjct: 376 PSHLEAVDPVVMGKVRAEAFYAGD 399
>sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=ogdh PE=3 SV=1
Length = 1013
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 9 GRLNVLANVCRKPLEQIFTQF----AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLA 64
GRLNVLANV RKPL IF +F ++E +GDVKYHLGT +R+ + K + L+
Sbjct: 303 GRLNVLANVVRKPLPAIFNEFNGGVISIEGEYSATGDVKYHLGTSYDRVTS-SGKKVHLS 361
Query: 65 VVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
+VANPSHLEAV+P+V+GK RA+Q Y D E KK
Sbjct: 362 LVANPSHLEAVNPLVEGKVRAKQHYSKDTEQKK 394
>sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1
Length = 1009
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD-GSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLN+L N+ RKP + IF++F + DD GSGDVKYHLG +R + K + L++VA
Sbjct: 306 GRLNLLHNIVRKPAQAIFSEFRGTQDPDDEGSGDVKYHLGMNYQRPT-PSGKRVSLSLVA 364
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGD 92
NPSHLEA DPVV GK RA Q Y D
Sbjct: 365 NPSHLEAEDPVVLGKVRAIQHYTSD 389
>sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=KGD1 PE=1
SV=2
Length = 1014
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD--GSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVL+NV RKP E IF++F A DD GSGDVKYHLG +R + K + L++V
Sbjct: 307 GRLNVLSNVVRKPNESIFSEFKGSSARDDIEGSGDVKYHLGMNYQRPT-TSGKYVNLSLV 365
Query: 67 ANPSHLEAVDPVVQGKTRA 85
ANPSHLE+ DPVV G+TRA
Sbjct: 366 ANPSHLESQDPVVLGRTRA 384
>sp|Q73WX4|KGD_MYCPA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=kgd
PE=3 SV=1
Length = 1247
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIF++F A GSGDVKYHLG L + +I++++
Sbjct: 559 GRLNVLANIVGKPYSQIFSEFEGNLNPAQAHGSGDVKYHLGATGVYLQMFGDNDIQVSLT 618
Query: 67 ANPSHLEAVDPVVQGKTRAEQ---FYRGDNEGKKLEYSV 102
ANPSHLEAVDPV++G RA+Q + D++G + +SV
Sbjct: 619 ANPSHLEAVDPVLEGLVRAKQDLLDHGADDQGDEKAFSV 657
>sp|Q1B4V6|KGD_MYCSS Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain MCS) GN=kgd PE=3 SV=1
Length = 1269
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIF++F + GSGDVKYHLG+ L + +I +++
Sbjct: 584 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGSSGTYLQMFGDNDITVSLT 643
Query: 67 ANPSHLEAVDPVVQGKTRAEQ--FYRGDNE 94
ANPSHLEAVDPV++G RA+Q +GD E
Sbjct: 644 ANPSHLEAVDPVMEGLVRAKQDLLDKGDTE 673
>sp|A1UK81|KGD_MYCSK Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain KMS) GN=kgd PE=3 SV=1
Length = 1269
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIF++F + GSGDVKYHLG+ L + +I +++
Sbjct: 584 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGSSGTYLQMFGDNDITVSLT 643
Query: 67 ANPSHLEAVDPVVQGKTRAEQ--FYRGDNE 94
ANPSHLEAVDPV++G RA+Q +GD E
Sbjct: 644 ANPSHLEAVDPVMEGLVRAKQDLLDKGDTE 673
>sp|A3Q3N5|KGD_MYCSJ Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain JLS) GN=kgd PE=3 SV=1
Length = 1264
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIF++F + GSGDVKYHLG+ L + +I +++
Sbjct: 579 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGSSGTYLQMFGDNDITVSLT 638
Query: 67 ANPSHLEAVDPVVQGKTRAEQ--FYRGDNE 94
ANPSHLEAVDPV++G RA+Q +GD E
Sbjct: 639 ANPSHLEAVDPVMEGLVRAKQDLLDKGDTE 668
>sp|A1TDK2|KGD_MYCVP Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=kgd PE=3 SV=2
Length = 1243
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLG---TYIERLNRVTNKNIRL 63
GRLNVLAN+ KP QIFT+F + GSGDVKYHLG TYI+ + +I +
Sbjct: 559 GRLNVLANIVGKPYSQIFTEFEGNLNPSQAHGSGDVKYHLGANGTYIQMFG---DNDIDV 615
Query: 64 AVVANPSHLEAVDPVVQGKTRAEQ 87
++VANPSHLEAVDPV++G RA+Q
Sbjct: 616 SLVANPSHLEAVDPVLEGLVRAKQ 639
>sp|A1KI36|KGD_MYCBP Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2
Length = 1231
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIFT+F + GSGDVKYHLG L + +I++++
Sbjct: 543 GRLNVLANIVGKPYSQIFTEFEGNLNPSQAHGSGDVKYHLGATGLYLQMFGDNDIQVSLT 602
Query: 67 ANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLEAVDPV++G RA+Q
Sbjct: 603 ANPSHLEAVDPVLEGLVRAKQ 623
>sp|Q7U0A6|KGD_MYCBO Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=kgd PE=3 SV=2
Length = 1231
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIFT+F + GSGDVKYHLG L + +I++++
Sbjct: 543 GRLNVLANIVGKPYSQIFTEFEGNLNPSQAHGSGDVKYHLGATGLYLQMFGDNDIQVSLT 602
Query: 67 ANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLEAVDPV++G RA+Q
Sbjct: 603 ANPSHLEAVDPVLEGLVRAKQ 623
>sp|O50463|KGD_MYCTU Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
tuberculosis GN=kgd PE=1 SV=4
Length = 1231
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIFT+F + GSGDVKYHLG L + +I++++
Sbjct: 543 GRLNVLANIVGKPYSQIFTEFEGNLNPSQAHGSGDVKYHLGATGLYLQMFGDNDIQVSLT 602
Query: 67 ANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLEAVDPV++G RA+Q
Sbjct: 603 ANPSHLEAVDPVLEGLVRAKQ 623
>sp|A5U1U6|KGD_MYCTA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3
SV=2
Length = 1231
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIFT+F + GSGDVKYHLG L + +I++++
Sbjct: 543 GRLNVLANIVGKPYSQIFTEFEGNLNPSQAHGSGDVKYHLGATGLYLQMFGDNDIQVSLT 602
Query: 67 ANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLEAVDPV++G RA+Q
Sbjct: 603 ANPSHLEAVDPVLEGLVRAKQ 623
>sp|A0PVU7|KGD_MYCUA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
ulcerans (strain Agy99) GN=kgd PE=3 SV=1
Length = 1238
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIF++F + GSGDVKYHLG L + +I++++
Sbjct: 550 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGVYLQMFGDNDIQVSLT 609
Query: 67 ANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLEAVDPV++G RA+Q
Sbjct: 610 ANPSHLEAVDPVLEGLVRAKQ 630
>sp|A0R2B1|KGD_MYCS2 Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=kgd PE=1
SV=1
Length = 1227
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLG---TYIERLNRVTNKNIRL 63
GRLNVLAN+ KP QIF++F + GSGDVKYHLG TYI+ + +I +
Sbjct: 541 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFG---DNDIEV 597
Query: 64 AVVANPSHLEAVDPVVQGKTRAEQ 87
++ ANPSHLEAVDPV++G RA+Q
Sbjct: 598 SLTANPSHLEAVDPVLEGLVRAKQ 621
>sp|Q8NRC3|ODO12_CORGL 2-oxoglutarate dehydrogenase E1/E2 component OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=odhA PE=1 SV=2
Length = 1221
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQF-AALEAAD-DGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVL N+ KPL IF +F +E GSGDVKYHLG+ + L + I++++
Sbjct: 545 GRLNVLFNIVGKPLASIFNEFEGQMEQGQIGGSGDVKYHLGSEGQHLQMFGDGEIKVSLT 604
Query: 67 ANPSHLEAVDPVVQGKTRAEQFY 89
ANPSHLEAV+PV++G RA+Q Y
Sbjct: 605 ANPSHLEAVNPVMEGIVRAKQDY 627
>sp|Q9CC97|KGD_MYCLE Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
leprae (strain TN) GN=kgd PE=3 SV=2
Length = 1238
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
GRLNVLAN+ KP QIFT+F SGDVKYHLG L + +I++++
Sbjct: 552 GRLNVLANIVGKPYSQIFTEFEGNLNPTLAHSSGDVKYHLGATGLYLQMFGDNDIQVSLT 611
Query: 67 ANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLEAVDPV++G RA+Q
Sbjct: 612 ANPSHLEAVDPVLEGLVRAKQ 632
>sp|A6WXF0|ODO1_OCHA4 2-oxoglutarate dehydrogenase E1 component OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucA PE=3
SV=1
Length = 1001
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F A D GSGDVKYHLG +R + L++
Sbjct: 302 GRLNVLSQVMGKPHRAIFHEFKGGSYAPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 359
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 360 TANPSHLEIVNPVVMGKARAKQ 381
>sp|Q8F6S7|ODO1_LEPIN 2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=sucA PE=3 SV=1
Length = 920
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDGS-GDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVL N+ KP IF +F D+ S DVKYHLG R+ + K ++L++
Sbjct: 246 GRLNVLVNIIEKPASLIFAEFEEKTDKDNLSYADVKYHLGYSNSRMT-TSGKEVKLSLAF 304
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
NPSHLE VDPVV G RA Q GD + K
Sbjct: 305 NPSHLECVDPVVTGSVRARQTLIGDKDRSK 334
>sp|Q72PJ7|ODO1_LEPIC 2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=sucA PE=3 SV=1
Length = 920
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDGS-GDVKYHLGTYIERLNRVTNKNIRLAVVA 67
GRLNVL N+ KP IF +F D+ S DVKYHLG R+ + K ++L++
Sbjct: 246 GRLNVLVNIIEKPASLIFAEFEEKTDKDNLSYADVKYHLGYSNSRMT-TSGKEVKLSLAF 304
Query: 68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
NPSHLE VDPVV G RA Q GD + K
Sbjct: 305 NPSHLECVDPVVTGSVRARQTLIGDKDRSK 334
>sp|A9M8Q9|ODO1_BRUC2 2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|Q8FYF7|ODO1_BRUSU 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis biovar 1
(strain 1330) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|B0CIS7|ODO1_BRUSI 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|Q8YJE4|ODO1_BRUME 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=sucA
PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|C0RFG8|ODO1_BRUMB 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|Q57AX5|ODO1_BRUAB 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
biovar 1 (strain 9-941) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|Q2YLS2|ODO1_BRUA2 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain 2308) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|B2S877|ODO1_BRUA1 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain S19) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|A5VSQ0|ODO1_BRUO2 2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=sucA PE=3 SV=1
Length = 1004
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADD---GSGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLNVL+ V KP IF +F D GSGDVKYHLG +R + L++
Sbjct: 306 GRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDR--EFDGNKVHLSL 363
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
ANPSHLE V+PVV GK RA+Q
Sbjct: 364 TANPSHLEIVNPVVMGKARAKQ 385
>sp|Q4UKI8|ODO1_RICFE 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucA PE=3 SV=2
Length = 977
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDG---SGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLN L V KP + + F + D SGDVKYHLG +R + NK I L++
Sbjct: 303 GRLNTLTKVVGKPYKAVIAGFISGSVFPDELNVSGDVKYHLGYSSDR--TIDNKKIHLSL 360
Query: 66 VANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLE 99
NPSHLEAV+P+V GK RA+Q GD + K++
Sbjct: 361 ADNPSHLEAVNPIVAGKVRAKQDILGDTKRSKVK 394
>sp|C5D802|ODO1_GEOSW 2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp.
(strain WCH70) GN=odhA PE=3 SV=1
Length = 952
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 19/94 (20%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAAD----DGS--------GDVKYHLGTYIERLNRV 56
GRLNVLA+V KP E IF +F E+ D +GS GDVKYHLG R+
Sbjct: 258 GRLNVLAHVLGKPYEMIFAEFQHAESKDFMPSEGSVAITYGWTGDVKYHLGA----ARRL 313
Query: 57 TNKN---IRLAVVANPSHLEAVDPVVQGKTRAEQ 87
NKN +R+ + NPSHLE V+PVV G TRA Q
Sbjct: 314 RNKNEHTMRITLANNPSHLEVVNPVVLGFTRAAQ 347
>sp|Q65IH4|ODO1_BACLD 2-oxoglutarate dehydrogenase E1 component OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=odhA PE=3 SV=1
Length = 944
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAAD----DGS--------GDVKYHLGTYIERLNRV 56
GRLNVLA+V KP E IF++F D +GS GDVKYHLG ++
Sbjct: 250 GRLNVLAHVLGKPYEIIFSEFQHAPNKDLVPSEGSTGINYGWTGDVKYHLGAN-RQIQDE 308
Query: 57 TNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMA 110
K R+A+ NPSHLE +DP+V+G TRA Q R ++ Y V KSMA
Sbjct: 309 HTKTARIALANNPSHLEFIDPIVEGSTRAAQETRTES-----GYPVQDVKKSMA 357
>sp|Q92J42|ODO1_RICCN 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=sucA PE=3 SV=1
Length = 928
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDG---SGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLN L V KP + + F + D SGDVKYHLG +R + +K I L++
Sbjct: 254 GRLNTLTKVVGKPYKAVIADFISGSVFPDELNVSGDVKYHLGYSSDR--TLEDKKIHLSL 311
Query: 66 VANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLE 99
NPSHLEAV+P+V GK RA+Q GD + K++
Sbjct: 312 ADNPSHLEAVNPIVAGKVRAKQDILGDTKRSKVK 345
>sp|P23129|ODO1_BACSU 2-oxoglutarate dehydrogenase E1 component OS=Bacillus subtilis
(strain 168) GN=odhA PE=3 SV=3
Length = 944
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAAD----DGS--------GDVKYHLGTYIERLNRV 56
GRLNVLA+V KP E IF++F D +GS GDVKYHLG E L
Sbjct: 250 GRLNVLAHVLGKPYEIIFSEFQHAPNKDLVPSEGSIGISYGWTGDVKYHLGANRE-LQDA 308
Query: 57 TNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMA 110
K+ R+ + NPSHLE ++P+V+G TRA Q R + Y V + KS+A
Sbjct: 309 ETKSARITLANNPSHLEFINPIVEGSTRAAQETRTQS-----GYPVQDETKSLA 357
>sp|Q5L172|ODO1_GEOKA 2-oxoglutarate dehydrogenase E1 component OS=Geobacillus
kaustophilus (strain HTA426) GN=odhA PE=3 SV=1
Length = 950
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAAD----DGS--------GDVKYHLGTYIERLNRV 56
GRLNVLA+V KP E IF +F E+ + +GS GDVKYHLG RL
Sbjct: 257 GRLNVLAHVLGKPYEMIFAEFQHAESKNFIPSEGSVAITYGWTGDVKYHLGA-ARRLRNQ 315
Query: 57 TNKNIRLAVVANPSHLEAVDPVVQGKTRAEQ 87
+ +R+ + NPSHLE V+PVV G TRA Q
Sbjct: 316 SAHTMRITLANNPSHLEVVNPVVLGYTRAAQ 346
>sp|A7Z5J9|ODO1_BACA2 2-oxoglutarate dehydrogenase E1 component OS=Bacillus
amyloliquefaciens (strain FZB42) GN=odhA PE=3 SV=1
Length = 944
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAAD----DGS--------GDVKYHLGTYIERLNRV 56
GRLNVLA+V KP E IF++F D +GS GDVKYHLG +L
Sbjct: 250 GRLNVLAHVLGKPYEIIFSEFQHAPNKDLVPSEGSTGISYGWTGDVKYHLGA-DRQLQDA 308
Query: 57 TNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMA 110
K+ R+ + NPSHLE ++P+V+G TRA Q R + Y V + KS+A
Sbjct: 309 ETKSARITLANNPSHLEFINPIVEGSTRAAQETR-----TQKGYPVQDETKSLA 357
>sp|Q1RHI4|ODO1_RICBR 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii
(strain RML369-C) GN=sucA PE=3 SV=1
Length = 927
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDG---SGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLN L V KP + F + D SGDVKYHLG +R+ V +K I L++
Sbjct: 252 GRLNTLTKVVGKPYRAVIAGFISGSVFPDELNVSGDVKYHLGYSSDRV--VGDKKIHLSL 309
Query: 66 VANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLE 99
NPSHLEAV+P+ GK RA+Q DN+ K++
Sbjct: 310 ADNPSHLEAVNPIFAGKVRAKQDMLKDNKRSKVK 343
>sp|Q89AJ7|ODO1_BUCBP Oxoglutarate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=sucA PE=3 SV=1
Length = 916
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
GRLNVLAN+ KP++ IF +F + + SGDVKYH+G + + + I L + +N
Sbjct: 243 GRLNVLANILDKPIKTIFNEFCENNSNNFNSGDVKYHMGFCCTK--TIGLRKIILDLKSN 300
Query: 69 PSHLEAVDPVVQGKTRA 85
PSHLE ++PVV G +RA
Sbjct: 301 PSHLEVINPVVVGSSRA 317
>sp|Q9ZDY3|ODO1_RICPR 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia prowazekii
(strain Madrid E) GN=sucA PE=3 SV=1
Length = 936
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 9 GRLNVLANVCRKPLEQIFTQFAALEAADDG---SGDVKYHLGTYIERLNRVTNKNIRLAV 65
GRLN L V KP +++ F DG SGDVKYHLG +R+ N+ I L++
Sbjct: 254 GRLNTLTKVVGKPYKEVIASFINGNIFPDGLNVSGDVKYHLGYSADRVR--ANQKIHLSL 311
Query: 66 VANPSHLEAVDPVVQGKTRAEQ 87
NPSHLEA++ +V GK RA+Q
Sbjct: 312 ADNPSHLEAINSIVAGKVRAKQ 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,059,995
Number of Sequences: 539616
Number of extensions: 1573078
Number of successful extensions: 4117
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3842
Number of HSP's gapped (non-prelim): 117
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)