BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11221
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O61199|ODO1_CAEEL 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
elegans GN=T22B11.5 PE=1 SV=2
Length = 1029
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISE 83
+++FE FLAKKW SEKRFGLEGCE+LIPAMKQVID S+ LGV+S V+GMPHRG N+++
Sbjct: 266 STKFEEFLAKKWPSEKRFGLEGCEVLIPAMKQVIDSSSTLGVDSFVIGMPHRGRLNVLAN 325
Query: 84 TTGQGLQKVPRLFSQ---NPQNNGDIRH 108
Q L + FS + +GD+++
Sbjct: 326 VCRQPLATILSQFSTLEPADEGSGDVKY 353
>sp|Q5R9L8|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii
GN=OGDHL PE=2 SV=2
Length = 1010
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 79/113 (69%), Gaps = 11/113 (9%)
Query: 5 VISNSSEIVSPLLLRSSATFSNSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTE 64
V+ SSE LL R + FE FLA+KWSSEKRFGLEGCE++IPA+K +IDKS+E
Sbjct: 230 VMQFSSEEKRTLLAR---LVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSE 286
Query: 65 LGVESVVMGMPHRG--NLISETTGQGLQKV-----PRLFSQNPQNNGDIRHFV 110
+G+E+V++GMPHRG N+++ + L+++ P+L + + + +GD+++ +
Sbjct: 287 MGIENVILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAAD-EGSGDVKYHL 338
>sp|Q9ULD0|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens
GN=OGDHL PE=1 SV=3
Length = 1010
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 79/113 (69%), Gaps = 11/113 (9%)
Query: 5 VISNSSEIVSPLLLRSSATFSNSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTE 64
V+ SSE LL R + FE FLA+KWSSEKRFGLEGCE++IPA+K +IDKS+E
Sbjct: 230 VMQFSSEEKRTLLAR---LVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSE 286
Query: 65 LGVESVVMGMPHRG--NLISETTGQGLQKV-----PRLFSQNPQNNGDIRHFV 110
+G+E+V++GMPHRG N+++ + L+++ P+L + + + +GD+++ +
Sbjct: 287 MGIENVILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAAD-EGSGDVKYHL 338
>sp|Q623T0|ODO1_CAEBR 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
briggsae GN=CBG01737 PE=3 SV=1
Length = 1027
Score = 97.1 bits (240), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISE 83
+++FE FLAKKW SEKRFGLEGCE+LIPA+KQVID S+ LGV+S V+GMPHRG N+++
Sbjct: 264 STKFEEFLAKKWPSEKRFGLEGCEVLIPAIKQVIDSSSTLGVDSFVIGMPHRGRLNVLAN 323
Query: 84 TTGQGLQKVPRLFSQ---NPQNNGDIRH 108
Q L + FS + +GD+++
Sbjct: 324 VCRQPLATILSQFSTLEPADEGSGDVKY 351
>sp|Q68EW0|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis
GN=ogdhl PE=2 SV=1
Length = 1018
Score = 95.9 bits (237), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 69/90 (76%), Gaps = 8/90 (8%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISE 83
++ FE FLA+KWSSEKRFGLEGCE++IPA+K +IDKS+E+G+E V++GMPHRG N+++
Sbjct: 256 STRFEDFLARKWSSEKRFGLEGCEVMIPALKAIIDKSSEMGLEYVILGMPHRGRLNVLAN 315
Query: 84 TTGQGLQKV-----PRLFSQNPQNNGDIRH 108
+ L ++ P+L + + + +GD+++
Sbjct: 316 VIRKDLDQIFCQFDPKLEASD-EGSGDVKY 344
>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH
PE=2 SV=1
Length = 1023
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +IDKS+E GV+ V+MGMPHRG L
Sbjct: 261 STRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRL 315
>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=OGDH PE=2 SV=1
Length = 1023
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +IDKS+E GV+ V+MGMPHRG L
Sbjct: 261 STRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRL 315
>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH
PE=1 SV=3
Length = 1023
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +IDKS+E GV+ V+MGMPHRG L
Sbjct: 261 STRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRL 315
>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH
PE=2 SV=1
Length = 1023
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +IDKS+E GV+ V+MGMPHRG L
Sbjct: 261 STRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRL 315
>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis
GN=ogdh PE=2 SV=1
Length = 1021
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +IDKS+ GV+ V+MGMPHRG L
Sbjct: 260 STRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSGNGVDYVIMGMPHRGRL 314
>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ogdh PE=1 SV=1
Length = 1023
Score = 87.8 bits (216), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +ID S+ GV+ V+MGMPHRG L
Sbjct: 261 STRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDMSSANGVDYVIMGMPHRGRL 315
>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh
PE=1 SV=3
Length = 1023
Score = 87.4 bits (215), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 26 NSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
++ FE FL +KWSSEKRFGLEGCE+LIPA+K +ID S+ GV+ V+MGMPHRG L
Sbjct: 261 STRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDMSSANGVDYVIMGMPHRGRL 315
>sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=ogdh PE=3 SV=1
Length = 1013
Score = 77.8 bits (190), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 28 EFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
+FE FL K+ + +RFGL+GCE LIP MK +ID +TE GVES+V+GMPHRG L
Sbjct: 253 QFEGFLGLKYRATRRFGLDGCESLIPGMKAMIDTATEDGVESIVLGMPHRGRL 305
>sp|A3Q3N5|KGD_MYCSJ Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain JLS) GN=kgd PE=3 SV=1
Length = 1264
Score = 71.6 bits (174), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IPAM VID+ E ++ VV+GMPHRG N+++ G
Sbjct: 530 FETFLQTKYVGQKRFSLEGAETVIPAMDAVIDQCAEHALDEVVIGMPHRGRLNVLANIVG 589
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTF 122
+ ++ F N +GD+++ + S+ T+L F
Sbjct: 590 KPYSQIFSEFEGNLNPSQAHGSGDVKYHL--GSSGTYLQMF 628
>sp|Q1B4V6|KGD_MYCSS Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain MCS) GN=kgd PE=3 SV=1
Length = 1269
Score = 71.6 bits (174), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IPAM VID+ E ++ VV+GMPHRG N+++ G
Sbjct: 535 FETFLQTKYVGQKRFSLEGAETVIPAMDAVIDQCAEHALDEVVIGMPHRGRLNVLANIVG 594
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTF 122
+ ++ F N +GD+++ + S+ T+L F
Sbjct: 595 KPYSQIFSEFEGNLNPSQAHGSGDVKYHL--GSSGTYLQMF 633
>sp|A1UK81|KGD_MYCSK Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain KMS) GN=kgd PE=3 SV=1
Length = 1269
Score = 71.6 bits (174), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IPAM VID+ E ++ VV+GMPHRG N+++ G
Sbjct: 535 FETFLQTKYVGQKRFSLEGAETVIPAMDAVIDQCAEHALDEVVIGMPHRGRLNVLANIVG 594
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTF 122
+ ++ F N +GD+++ + S+ T+L F
Sbjct: 595 KPYSQIFSEFEGNLNPSQAHGSGDVKYHL--GSSGTYLQMF 633
>sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1
Length = 1009
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ ++KRFGLEGCE ++P MK +ID+S + G+ ++V+GM HRG NL+
Sbjct: 257 FERFLFTKFPNDKRFGLEGCEAMVPGMKALIDRSVDEGISNIVIGMAHRGRLNLLHNIVR 316
Query: 87 QGLQKVPRLF--SQNP--QNNGDIRH 108
+ Q + F +Q+P + +GD+++
Sbjct: 317 KPAQAIFSEFRGTQDPDDEGSGDVKY 342
>sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=KGD1 PE=1
SV=2
Length = 1014
Score = 71.2 bits (173), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 43/54 (79%)
Query: 27 SEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
+ FE+FL+ K+ ++KRFGLEG E ++P +K ++D+S ELGVE +V+GM HRG L
Sbjct: 256 TSFESFLSTKFPNDKRFGLEGLESVVPGIKTLVDRSVELGVEDIVLGMAHRGRL 309
>sp|A0PVU7|KGD_MYCUA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
ulcerans (strain Agy99) GN=kgd PE=3 SV=1
Length = 1238
Score = 69.3 bits (168), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 501 FETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEYGLDEVVIGMPHRGRLNVLANIVG 560
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T +L F GD ++L
Sbjct: 561 KPYSQIFSEFEGNLNPSQAHGSGDVKYHL--GATGVYLQMF---------GDNDIQVSLT 609
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 610 ANPSHLEAVDPV 621
>sp|A0R2B1|KGD_MYCS2 Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=kgd PE=1
SV=1
Length = 1227
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M VID+ E G++ VV+ MPHRG N+++ G
Sbjct: 492 FETFLQTKYVGQKRFSLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVG 551
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T T++ F GD ++L
Sbjct: 552 KPYSQIFSEFEGNLNPSQAHGSGDVKYHL--GATGTYIQMF---------GDNDIEVSLT 600
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 601 ANPSHLEAVDPV 612
>sp|Q73WX4|KGD_MYCPA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=kgd
PE=3 SV=1
Length = 1247
Score = 68.6 bits (166), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 510 FETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEHGLDEVVIGMPHRGRLNVLANIVG 569
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T +L F GD ++L
Sbjct: 570 KPYSQIFSEFEGNLNPAQAHGSGDVKYHL--GATGVYLQMF---------GDNDIQVSLT 618
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 619 ANPSHLEAVDPV 630
>sp|O50463|KGD_MYCTU Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
tuberculosis GN=kgd PE=1 SV=4
Length = 1231
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 494 FETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEHGLDEVVIGMPHRGRLNVLANIVG 553
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T +L F GD ++L
Sbjct: 554 KPYSQIFTEFEGNLNPSQAHGSGDVKYHL--GATGLYLQMF---------GDNDIQVSLT 602
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 603 ANPSHLEAVDPV 614
>sp|A5U1U6|KGD_MYCTA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3
SV=2
Length = 1231
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 494 FETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEHGLDEVVIGMPHRGRLNVLANIVG 553
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T +L F GD ++L
Sbjct: 554 KPYSQIFTEFEGNLNPSQAHGSGDVKYHL--GATGLYLQMF---------GDNDIQVSLT 602
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 603 ANPSHLEAVDPV 614
>sp|A1KI36|KGD_MYCBP Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2
Length = 1231
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 494 FETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEHGLDEVVIGMPHRGRLNVLANIVG 553
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T +L F GD ++L
Sbjct: 554 KPYSQIFTEFEGNLNPSQAHGSGDVKYHL--GATGLYLQMF---------GDNDIQVSLT 602
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 603 ANPSHLEAVDPV 614
>sp|Q7U0A6|KGD_MYCBO Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=kgd PE=3 SV=2
Length = 1231
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 494 FETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEHGLDEVVIGMPHRGRLNVLANIVG 553
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N +GD+++ + +T +L F GD ++L
Sbjct: 554 KPYSQIFTEFEGNLNPSQAHGSGDVKYHL--GATGLYLQMF---------GDNDIQVSLT 602
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 603 ANPSHLEAVDPV 614
>sp|A1TDK2|KGD_MYCVP Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=kgd PE=3 SV=2
Length = 1243
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ E G++ VV+GMPHRG N+++ G
Sbjct: 510 FETFLQTKYVGQKRFSLEGAETVIPMMDAAIDQCAEHGLDEVVIGMPHRGRLNVLANIVG 569
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTF 122
+ ++ F N +GD+++ + + T++ F
Sbjct: 570 KPYSQIFTEFEGNLNPSQAHGSGDVKYHL--GANGTYIQMF 608
>sp|Q8FYF7|ODO1_BRUSU 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis biovar 1
(strain 1330) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|B0CIS7|ODO1_BRUSI 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|A5VSQ0|ODO1_BRUO2 2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|Q8YJE4|ODO1_BRUME 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=sucA
PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|C0RFG8|ODO1_BRUMB 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|A9M8Q9|ODO1_BRUC2 2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|Q57AX5|ODO1_BRUAB 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
biovar 1 (strain 9-941) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|Q2YLS2|ODO1_BRUA2 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain 2308) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|B2S877|ODO1_BRUA1 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain S19) GN=sucA PE=3 SV=1
Length = 1004
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + ++G++ VV+GM HRG N++S+ G
Sbjct: 257 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGQMGLKEVVLGMAHRGRLNVLSQVMG 316
Query: 87 QGLQKVPRLF---SQNP---QNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F S P + +GD+++ + SS F G++ HL+L
Sbjct: 317 KPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 363
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 364 TANPSHLEIVNPVVM 378
>sp|Q9CC97|KGD_MYCLE Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
leprae (strain TN) GN=kgd PE=3 SV=2
Length = 1238
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ +KRF LEG E +IP M ID+ + G++ VV+GMPHRG N+++ G
Sbjct: 503 FETFLHTKYVGQKRFSLEGAESVIPMMDAAIDQCAKHGLDEVVIGMPHRGRLNVLANIVG 562
Query: 87 QGLQKVPRLFSQN-----PQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLN 141
+ ++ F N ++GD+++ + +T +L F GD ++L
Sbjct: 563 KPYSQIFTEFEGNLNPTLAHSSGDVKYHL--GATGLYLQMF---------GDNDIQVSLT 611
Query: 142 CWPRAMFLSTPV 153
P + PV
Sbjct: 612 ANPSHLEAVDPV 623
>sp|A6WXF0|ODO1_OCHA4 2-oxoglutarate dehydrogenase E1 component OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucA PE=3
SV=1
Length = 1001
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 21/135 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE F+ K+ KRFGL+G E LIPA++Q++ + +GV+ ++ GM HRG N++S+ G
Sbjct: 253 FEQFIDVKYKGTKRFGLDGGESLIPALEQIVKRGGAMGVKEIIFGMAHRGRLNVLSQVMG 312
Query: 87 QGLQKVPRLFS------QNPQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + + F + + +GD+++ + SS F G++ HL+L
Sbjct: 313 KPHRAIFHEFKGGSYAPDDVEGSGDVKYHLGASSDREF------------DGNK-VHLSL 359
Query: 141 NCWPRAMFLSTPVCI 155
P + + PV +
Sbjct: 360 TANPSHLEIVNPVVM 374
>sp|P45303|ODO1_HAEIN 2-oxoglutarate dehydrogenase E1 component OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=sucA PE=3
SV=1
Length = 935
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
E +L K+ KRF LEG + IP MK++I S+ GV VVMGM HRG N++ G
Sbjct: 217 LERYLGAKFPGAKRFSLEGSDAFIPLMKEIIRHSSRQGVNDVVMGMAHRGRLNMLVNVLG 276
Query: 87 QGLQKVPRLFS--QNPQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTLNCWP 144
+ + + F+ + + GD+++ FSS D+ HLTL P
Sbjct: 277 KKPENLFDEFAGKHSSERTGDVKYHQGFSSDFAV-------------DDKRVHLTLAFNP 323
Query: 145 RAMFLSTPVCI 155
+ + +PV I
Sbjct: 324 SHLEIVSPVVI 334
>sp|Q8NRC3|ODO12_CORGL 2-oxoglutarate dehydrogenase E1/E2 component OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=odhA PE=1 SV=2
Length = 1221
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
FE FL K+ +KRF LEG E LIP M ID + G++ VV+GMPHRG L
Sbjct: 496 FENFLQTKYVGQKRFSLEGAEALIPLMDSAIDTAAGQGLDEVVIGMPHRGRL 547
>sp|P20707|ODO1_AZOVI 2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii
GN=sucA PE=3 SV=1
Length = 943
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 9 SSEIVSPLLLRSSATFSNSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVE 68
S E S LL R SA E +L K+ KRFGLEG E L+P + ++I +S G +
Sbjct: 202 SKEAKSHLLERLSAA---EGLEKYLGTKYPGTKRFGLEGGESLVPVVDEIIQRSGSYGTK 258
Query: 69 SVVMGMPHRGNLISETTGQGLQKVPR-LFSQNPQN------NGDIRHFVFFSS 114
VV+GM HRG L L K PR LF + +GD+++ FSS
Sbjct: 259 EVVIGMAHRGRL--NLLVNALGKNPRDLFDEFEGKHLVELGSGDVKYHQGFSS 309
>sp|Q89AJ7|ODO1_BUCBP Oxoglutarate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=sucA PE=3 SV=1
Length = 916
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
E + + K+ S KRF +EG E LIP +K+VI + + + ++ GM HRG N+++
Sbjct: 194 LEKYFSSKFPSIKRFSIEGAESLIPMLKEVIKYTKKFNLHKIIFGMSHRGRLNVLANILD 253
Query: 87 QGLQKVPRLFSQNPQNN---GDIRHFVFFSSTPT 117
+ ++ + F +N NN GD+++ + F T T
Sbjct: 254 KPIKTIFNEFCENNSNNFNSGDVKYHMGFCCTKT 287
>sp|Q4UKI8|ODO1_RICFE 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucA PE=3 SV=2
Length = 977
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 18 LRSSATFSNSE-------------FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTE 64
L S TFS+ + FE +L K+ KRF +EG + I AM + ID S
Sbjct: 230 LESEVTFSSEDKKTILNDLVEVEGFEQYLHTKFPGAKRFSVEGGDASIVAMSKAIDLSMN 289
Query: 65 LGVESVVMGMPHRG--NLISETTGQGLQKV------PRLFSQNPQNNGDIRHFVFFSSTP 116
GVE +V+GM HRG N +++ G+ + V +F +GD+++ + +SS
Sbjct: 290 QGVEEIVIGMAHRGRLNTLTKVVGKPYKAVIAGFISGSVFPDELNVSGDVKYHLGYSSD- 348
Query: 117 TFLHTFDWIKASQTQGDRGPHL 138
T D K + D HL
Sbjct: 349 ---RTIDNKKIHLSLADNPSHL 367
>sp|Q1RHI4|ODO1_RICBR 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii
(strain RML369-C) GN=sucA PE=3 SV=1
Length = 927
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 21/133 (15%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE +L K+ KRF +EG + I AM + ID S GVE +V+GM HRG N +++ G
Sbjct: 203 FEQYLHTKFPGAKRFSVEGGDASIVAMNKAIDLSLHQGVEEIVIGMAHRGRLNTLTKVVG 262
Query: 87 QGLQKV------PRLFSQNPQNNGDIRHFVFFSSTPTFLHTFDWIKASQTQGDRGPHLTL 140
+ + V +F +GD+++ + +SS + GD+ HL+L
Sbjct: 263 KPYRAVIAGFISGSVFPDELNVSGDVKYHLGYSS-------------DRVVGDKKIHLSL 309
Query: 141 NCWPRAMFLSTPV 153
P + P+
Sbjct: 310 ADNPSHLEAVNPI 322
>sp|Q9ZDY3|ODO1_RICPR 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia prowazekii
(strain Madrid E) GN=sucA PE=3 SV=1
Length = 936
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 16/109 (14%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ KRF +EG + I AM + ID S GVE +V+GM HRG N +++ G
Sbjct: 205 FEQFLHIKFPGAKRFSIEGGDASIVAMNKAIDLSMHQGVEEIVIGMAHRGRLNTLTKVVG 264
Query: 87 QGLQKV------PRLFSQNPQNNGDIRHFVFFSSTPTFLHTFDWIKASQ 129
+ ++V +F +GD+++ + +S+ D ++A+Q
Sbjct: 265 KPYKEVIASFINGNIFPDGLNVSGDVKYHLGYSA--------DRVRANQ 305
>sp|A7GMD4|ODO1_BACCN 2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=odhA PE=3 SV=1
Length = 958
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 9 SSEIVSPLLLRSSATFSNSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVE 68
S++ + LL R +A FE FL K + +KRF +EG ++L+P + ++I + + GVE
Sbjct: 186 SNQKRTALLKRLTAV---EGFEQFLHKTFVGQKRFSIEGVDMLVPVLDEMIAEGAKAGVE 242
Query: 69 SVVMGMPHRGNL 80
V++GM HRG L
Sbjct: 243 DVMIGMAHRGRL 254
>sp|A9VJX9|ODO1_BACWK 2-oxoglutarate dehydrogenase E1 component OS=Bacillus
weihenstephanensis (strain KBAB4) GN=odhA PE=3 SV=1
Length = 955
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
FE FL K + +KRF +EG ++L+P + +++ + + GVE V++GM HRG L
Sbjct: 203 FEQFLHKTFVGQKRFSIEGVDMLVPVLDEIVSEGAKGGVEDVMIGMAHRGRL 254
>sp|P23129|ODO1_BACSU 2-oxoglutarate dehydrogenase E1 component OS=Bacillus subtilis
(strain 168) GN=odhA PE=3 SV=3
Length = 944
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 8 NSSEIVSPLLLRSSATFSNSEFEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGV 67
NS+E +S +L R + FE FL + + +KRF +EG + L+P + +I +S + G
Sbjct: 183 NSAEKLSAVLERLTEV---EGFEQFLHRTFVGQKRFSIEGLDALVPVLDDIIAQSVKSGT 239
Query: 68 ESVVMGMPHRG--NLISETTGQGLQKVPRLFSQNPQNN 103
SV +GM HRG N+++ G+ + + F P +
Sbjct: 240 TSVNIGMAHRGRLNVLAHVLGKPYEIIFSEFQHAPNKD 277
>sp|Q68XI7|ODO1_RICTY 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucA PE=3 SV=1
Length = 933
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 16/109 (14%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRG--NLISETTG 86
FE FL K+ KRF +EG + I AM + ID S GVE +V+GM HRG N +++ G
Sbjct: 206 FEQFLHTKFPGAKRFSIEGGDSSIVAMNKAIDLSMNQGVEEIVIGMAHRGRLNTLTKVVG 265
Query: 87 QGLQKV------PRLFSQNPQNNGDIRHFVFFSSTPTFLHTFDWIKASQ 129
+ + V +F +GD+++ + +S+ D ++A+Q
Sbjct: 266 KPYKAVIAGFINGNVFPDELNISGDVKYHLGYSA--------DRVRANQ 306
>sp|Q92J42|ODO1_RICCN 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=sucA PE=3 SV=1
Length = 928
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Query: 18 LRSSATFSNSE-------------FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTE 64
L S TFS+ + FE +L K+ KRF +EG + I AM + ID S
Sbjct: 181 LESEVTFSSEDKKTILNDLVEVEGFEQYLHTKFPGAKRFSIEGGDASIVAMSKAIDLSMH 240
Query: 65 LGVESVVMGMPHRG--NLISETTGQGLQKV------PRLFSQNPQNNGDIRHFVFFSSTP 116
GV +V+GM HRG N +++ G+ + V +F +GD+++ + +SS
Sbjct: 241 QGVSEIVIGMAHRGRLNTLTKVVGKPYKAVIADFISGSVFPDELNVSGDVKYHLGYSSDR 300
Query: 117 TF 118
T
Sbjct: 301 TL 302
>sp|Q81GF2|ODO1_BACCR 2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=odhA PE=3 SV=1
Length = 955
Score = 55.1 bits (131), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 29 FEAFLAKKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVESVVMGMPHRGNL 80
FE FL K + +KRF +EG ++L+P + +++ + + GVE V++GM HRG L
Sbjct: 203 FEQFLHKTFVGQKRFSIEGVDMLVPVLDEIVLEGAKNGVEDVMIGMAHRGRL 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,026,466
Number of Sequences: 539616
Number of extensions: 2804208
Number of successful extensions: 7422
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7299
Number of HSP's gapped (non-prelim): 115
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)