Query psy11230
Match_columns 553
No_of_seqs 290 out of 3288
Neff 11.9
Searched_HMMs 13730
Date Fri Aug 16 21:31:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11230.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11230hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 1.2E-53 8.6E-58 407.6 48.5 391 14-544 2-397 (408)
2 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 6.4E-53 4.6E-57 402.5 42.7 367 48-553 2-370 (408)
3 d1wdya_ d.211.1.1 (A:) RNase L 100.0 9.8E-35 7.2E-39 261.6 33.7 272 209-544 5-284 (285)
4 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 1.3E-35 9.8E-40 255.1 23.1 218 310-534 3-222 (223)
5 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 2.8E-35 2E-39 253.1 24.2 204 346-553 4-209 (223)
6 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 1.9E-35 1.4E-39 261.4 22.2 228 305-538 4-250 (255)
7 d1wdya_ d.211.1.1 (A:) RNase L 100.0 2.2E-34 1.6E-38 259.3 27.7 274 11-375 4-283 (285)
8 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 5.6E-35 4.1E-39 258.2 20.8 242 8-267 5-250 (255)
9 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 1.2E-33 8.8E-38 253.2 20.7 270 79-497 1-275 (277)
10 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 7.3E-34 5.4E-38 254.7 18.3 204 327-534 56-275 (277)
11 d1s70b_ d.211.1.1 (B:) Myosin 100.0 1.2E-32 8.8E-37 248.3 25.3 204 346-553 41-272 (291)
12 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 1.1E-32 8.2E-37 239.0 23.6 218 312-538 2-228 (229)
13 d1s70b_ d.211.1.1 (B:) Myosin 100.0 3E-33 2.2E-37 252.3 14.9 234 10-251 38-274 (291)
14 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 1.5E-31 1.1E-35 231.8 24.1 204 346-553 1-213 (229)
15 d1ot8a_ d.211.1.1 (A:) Neuroge 100.0 2.2E-30 1.6E-34 221.0 18.3 204 325-532 2-208 (209)
16 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 2.4E-30 1.8E-34 222.2 16.7 191 344-538 1-203 (221)
17 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 6.4E-30 4.7E-34 219.5 16.2 174 377-553 1-185 (221)
18 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 6E-28 4.4E-32 209.2 27.6 206 344-553 2-217 (228)
19 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 2.6E-28 1.9E-32 211.5 22.8 215 310-530 3-227 (228)
20 d2ajaa1 a.118.24.1 (A:3-348) H 100.0 5.6E-32 4.1E-36 247.5 -6.2 240 4-264 82-339 (346)
21 d1ot8a_ d.211.1.1 (A:) Neuroge 100.0 8.7E-27 6.3E-31 198.4 22.2 187 307-495 20-208 (209)
22 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 7.6E-27 5.5E-31 188.3 17.1 151 381-536 4-156 (156)
23 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 1.8E-26 1.3E-30 186.1 17.5 152 347-499 3-156 (156)
24 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 2.2E-26 1.6E-30 184.9 17.7 152 13-193 3-155 (156)
25 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 2.4E-26 1.8E-30 184.7 16.6 130 400-535 26-155 (156)
26 d1awcb_ d.211.1.1 (B:) GA bind 99.9 7E-26 5.1E-30 181.9 18.0 150 12-190 2-152 (153)
27 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 2.4E-26 1.7E-30 173.7 11.0 106 444-553 3-108 (118)
28 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 2.6E-26 1.9E-30 175.6 10.8 120 11-134 2-123 (125)
29 d1awcb_ d.211.1.1 (B:) GA bind 99.9 5.2E-25 3.8E-29 176.8 18.6 149 347-532 4-152 (153)
30 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 7.3E-26 5.3E-30 173.1 11.8 121 410-535 3-124 (125)
31 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 2.3E-26 1.7E-30 173.7 5.3 105 13-120 3-108 (118)
32 d1ycsb1 d.211.1.1 (B:327-456) 99.9 2.4E-25 1.8E-29 171.3 10.0 123 412-537 3-127 (130)
33 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 4.8E-27 3.5E-31 214.5 0.2 230 306-535 86-339 (346)
34 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 8.7E-25 6.3E-29 196.1 14.3 148 2-153 96-299 (301)
35 d1ycsb1 d.211.1.1 (B:327-456) 99.9 8E-25 5.8E-29 168.4 10.1 119 14-135 3-125 (130)
36 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 1.6E-24 1.2E-28 194.3 13.0 178 367-553 95-299 (301)
37 d1dcqa1 d.211.1.1 (A:369-522) 99.9 2E-22 1.5E-26 158.5 16.8 122 413-538 9-139 (154)
38 d1dcqa1 d.211.1.1 (A:369-522) 99.9 1.2E-22 8.7E-27 159.9 15.2 125 13-139 7-140 (154)
39 d2crna1 a.5.2.1 (A:8-58) Suppr 56.4 1.5 0.00011 24.8 0.5 44 24-72 2-46 (51)
40 d1veka_ a.5.2.1 (A:) Ubiquitin 38.1 7.9 0.00057 24.5 1.9 45 24-73 29-74 (84)
41 d1veka_ a.5.2.1 (A:) Ubiquitin 33.0 13 0.00098 23.3 2.4 46 488-541 29-74 (84)
42 d1whca_ a.5.2.1 (A:) UBA/UBX 3 24.9 13 0.00094 21.9 1.2 44 24-72 9-53 (64)
No 1
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.2e-53 Score=407.64 Aligned_cols=391 Identities=33% Similarity=0.432 Sum_probs=256.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhhcCCC
Q psy11230 14 TLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTRD 92 (553)
Q Consensus 14 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 92 (553)
||||.||..|+.++|++|++.|++++.. +..|.||||+|+..|+ ++|++|+++|++++.++..|+||||+|+.. ++
T Consensus 2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~--g~ 78 (408)
T d1n11a_ 2 TPLHVASFMGHLPIVKNLLQRGASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI--GH 78 (408)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH--TC
T ss_pred ChHHHHHHCcCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc--CC
Confidence 5555555555555555555555555554 5555555555555555 555555555555555555555555555555 55
Q ss_pred hHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHhCCCCccccCCCCC
Q psy11230 93 PTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNFGK 172 (553)
Q Consensus 93 ~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~~~~~~~~~~~~~~~ 172 (553)
.+++++|+..+.++........+++..+...+...........+......+ .
T Consensus 79 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~--- 130 (408)
T d1n11a_ 79 TNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT-------------------------K--- 130 (408)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-------------------------T---
T ss_pred HHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccc-------------------------c---
Confidence 555555555555554444555555555555555555444444433332222 1
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccchhccccccCCchhhHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCcHHHHHHHc
Q psy11230 173 TAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCKTALDIAVEH 252 (553)
Q Consensus 173 ~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~ 252 (553)
.+.+++..++..++.+++++|++++.+++..+..|.+||++|+..
T Consensus 131 -----------------------------------~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~~ 175 (408)
T d1n11a_ 131 -----------------------------------KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH 175 (408)
T ss_dssp -----------------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHT
T ss_pred -----------------------------------ccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCchHHHHHHHc
Confidence 222334444445555666666666666666666677777777777
Q ss_pred CCHHHHHHHHhCCCCCCcccccCCHHHHHHHhCCHHHHHHHHHhcCCCCCccccCCCCCchHHHHHhccccChHHHHHHH
Q psy11230 253 GHLKIVEFLLDHGACVDSLQFIHSPLHLAIEKQHIAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWNTTMFKTLL 332 (553)
Q Consensus 253 ~~~e~v~~Ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 332 (553)
|+.+++++|+++|+++.
T Consensus 176 ~~~~~~~~Ll~~g~~~~--------------------------------------------------------------- 192 (408)
T d1n11a_ 176 NNLDIVKLLLPRGGSPH--------------------------------------------------------------- 192 (408)
T ss_dssp TCHHHHHHHGGGTCCSC---------------------------------------------------------------
T ss_pred CCHHHHHHHHhcCCccc---------------------------------------------------------------
Confidence 77777776666655432
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCC
Q psy11230 333 YHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAK 411 (553)
Q Consensus 333 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~ 411 (553)
..+..+.||++.+......+....++..+......+..+.||++.|+..+..++. .++..+...+..+..|.
T Consensus 193 -------~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~ 265 (408)
T d1n11a_ 193 -------SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL 265 (408)
T ss_dssp -------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCC
T ss_pred -------ccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCC
Confidence 2334455566666666666666666665555555555566666666666666555 34445555666667778
Q ss_pred hHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHH
Q psy11230 412 TPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAI 491 (553)
Q Consensus 412 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~ 491 (553)
||++.|+..++.+++++|+++|++++..+..+.|||+.++..++.++++++++.|++++.++.+|.||||+|+++|+.++
T Consensus 266 ~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~i 345 (408)
T d1n11a_ 266 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDI 345 (408)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHH
Confidence 88888888888899999999888888888888899999999999999999999999998888889999999999999999
Q ss_pred HHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHH---HhcCCCCCCCCC
Q psy11230 492 LECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKL---LDYNPDLDVKDK 544 (553)
Q Consensus 492 ~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~L---l~~g~~~~~~~~ 544 (553)
+++|+++|++++..+. .|.||||+|++.|+.++|++| ++.+++..+.+.
T Consensus 346 v~~Ll~~GAd~n~~d~----~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~ 397 (408)
T d1n11a_ 346 VTLLLKNGASPNEVSS----DGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK 397 (408)
T ss_dssp HHHHHHTTCCSCCCCS----SSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----
T ss_pred HHHHHHCCCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHHHhcccccccccc
Confidence 9999999999888777 788999999999998888755 456666666665
No 2
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.4e-53 Score=402.54 Aligned_cols=367 Identities=29% Similarity=0.441 Sum_probs=307.8
Q ss_pred cHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhhcCCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCH
Q psy11230 48 SCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNY 126 (553)
Q Consensus 48 ~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~ 126 (553)
||||.||..|+ ++|++|++.|++++..|..|+||||+|+.. |+.+++++|+++|++++.++..|+|||++|+..|+.
T Consensus 2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~--g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~ 79 (408)
T d1n11a_ 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARA--GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 79 (408)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHH--TCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCH
T ss_pred ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCH
Confidence 67777777777 777777777777777777777777777777 777777777777777777777777777777777777
Q ss_pred HHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccchhccccc
Q psy11230 127 KMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENV 206 (553)
Q Consensus 127 ~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~ 206 (553)
+++++|++.+.++.......
T Consensus 80 ~~~~~Ll~~~~~~~~~~~~~------------------------------------------------------------ 99 (408)
T d1n11a_ 80 NMVKLLLENNANPNLATTAG------------------------------------------------------------ 99 (408)
T ss_dssp HHHHHHHHHTCCTTCCCTTC------------------------------------------------------------
T ss_pred HHHHHHHHhhhccccccccc------------------------------------------------------------
Confidence 77777777655543322222
Q ss_pred cCCchhhHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccCCHHHHHHHhCC
Q psy11230 207 KHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCKTALDIAVEHGHLKIVEFLLDHGACVDSLQFIHSPLHLAIEKQH 286 (553)
Q Consensus 207 ~~~~~~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~Ll~~~~~~~~~~~~~~~l~~a~~~~~ 286 (553)
..+...+...+...........+......+..+.++++.|+..++.+++++|++.+.+
T Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~------------------- 157 (408)
T d1n11a_ 100 ---HTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH------------------- 157 (408)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------
T ss_pred ---cchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCC-------------------
Confidence 2233333344555555555666666677777788888888888777777777766543
Q ss_pred HHHHHHHHHhcCCCCCccccCCCCCchHHHHHhccccChHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11230 287 IAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVK 366 (553)
Q Consensus 287 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~ 366 (553)
++..+..+.+||++|+..++.+++++|++
T Consensus 158 ---------------------------------------------------~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~ 186 (408)
T d1n11a_ 158 ---------------------------------------------------PNAAGKNGLTPLHVAVHHNNLDIVKLLLP 186 (408)
T ss_dssp ---------------------------------------------------TTCCCSSCCCHHHHHHHTTCHHHHHHHGG
T ss_pred ---------------------------------------------------CCcCCCcCchHHHHHHHcCCHHHHHHHHh
Confidence 33445667899999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCC
Q psy11230 367 HGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKD 445 (553)
Q Consensus 367 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t 445 (553)
+|++++..+..|.+|++.++.....+.. .++..+......+..+.|||+.|+..+..++++++++.+...+..+..|.|
T Consensus 187 ~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 266 (408)
T d1n11a_ 187 RGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT 266 (408)
T ss_dssp GTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred cCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCCC
Confidence 9999999999999999999999998888 566777777778888999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCC
Q psy11230 446 PLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNN 525 (553)
Q Consensus 446 ~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~ 525 (553)
|++.|+..++.+++++|+++|++++..+..+.|||+.++..++.++++++++.|++++..+. .|.||||.|+++|+
T Consensus 267 ~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~----~G~T~Lh~A~~~g~ 342 (408)
T d1n11a_ 267 PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK----LGYSPLHQAAQQGH 342 (408)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT----TSCCHHHHHHHTTC
T ss_pred hhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCC----CCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999987 89999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 526 EAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 526 ~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
.++|++|+++||+++++|.+|+||||+|
T Consensus 343 ~~iv~~Ll~~GAd~n~~d~~G~t~L~~A 370 (408)
T d1n11a_ 343 TDIVTLLLKNGASPNEVSSDGTTPLAIA 370 (408)
T ss_dssp HHHHHHHHHTTCCSCCCCSSSCCHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999986
No 3
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.8e-35 Score=261.57 Aligned_cols=272 Identities=31% Similarity=0.332 Sum_probs=223.9
Q ss_pred CchhhHHHHHcCCHHHHHHHHHcCCCCcCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc-cCCHHHHHHHhCC
Q psy11230 209 GGQLLLHLVRNGHQNAVKLILEKGANVHAKD-QLCKTALDIAVEHGHLKIVEFLLDHGACVDSLQF-IHSPLHLAIEKQH 286 (553)
Q Consensus 209 ~~~~l~~a~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~l~~A~~~~~~e~v~~Ll~~~~~~~~~~~-~~~~l~~a~~~~~ 286 (553)
+.++|+.|++.|+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|++.+........ ..+|...+...+.
T Consensus 5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (285)
T d1wdya_ 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCC
Confidence 4588999999999999999999999998765 4689999999999999999999998876655443 4566777776666
Q ss_pred HHHHHHHHHhcCCCCCccccCCCCCchHHHHHhccccChHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy11230 287 IAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVK 366 (553)
Q Consensus 287 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~ 366 (553)
.+...+.++. ..+....+..+.++++.|+..++...++.+++
T Consensus 85 ~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ 126 (285)
T d1wdya_ 85 VKLLKLFLSK--------------------------------------GADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126 (285)
T ss_dssp HHHHHHHHHT--------------------------------------TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH
T ss_pred ccccchhhhh--------------------------------------cccccccccCCCchhHHHHHhcchhhhhhhhh
Confidence 6666666554 22233345667889999999999999999998
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCchHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHh-CCCCccccccCCCC
Q psy11230 367 HGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLE-HGAQVDARTQLGKD 445 (553)
Q Consensus 367 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t 445 (553)
...+++....... .. ......|.||||+|+++|+.+++++|++ .|++++..+..|.+
T Consensus 127 ~~~~~~~~~~~~~--~~--------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~ 184 (285)
T d1wdya_ 127 RGANVNLRRKTKE--DQ--------------------ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184 (285)
T ss_dssp TTCCTTCCCCCCH--HH--------------------HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred hcccccccccchh--hh--------------------hhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCc
Confidence 8777665433221 10 1123567899999999999999999997 58999999999999
Q ss_pred HHHHHHHhC----CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc-cCCcccccccccCCCCcHHHHH
Q psy11230 446 PLYIAVEMH----NLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVN-KADINAKIISGIWKGYTPLHLA 520 (553)
Q Consensus 446 ~l~~A~~~~----~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~t~l~~A 520 (553)
++..+...+ ..+++++|+++|++++.++..|.||||+|+..++.+++++|++. |++++..+. .|.||||+|
T Consensus 185 ~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~----~G~TpL~~A 260 (285)
T d1wdya_ 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS----DGKTALLLA 260 (285)
T ss_dssp HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT----TSCCHHHHH
T ss_pred ccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCC----CCCCHHHHH
Confidence 888776543 35799999999999999999999999999999999999999985 899999877 899999999
Q ss_pred HhhCCHHHHHHHHhcCCCCCCCCC
Q psy11230 521 VESNNEAVINKLLDYNPDLDVKDK 544 (553)
Q Consensus 521 ~~~~~~~~v~~Ll~~g~~~~~~~~ 544 (553)
+++|+.++|++|+++||+++++|.
T Consensus 261 ~~~~~~eiv~~Ll~~GAd~n~~d~ 284 (285)
T d1wdya_ 261 VELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHcCCHHHHHHHHHCCCCCCcccC
Confidence 999999999999999999999984
No 4
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.3e-35 Score=255.14 Aligned_cols=218 Identities=28% Similarity=0.365 Sum_probs=185.0
Q ss_pred CCchHHHHHhccccChHHH-HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHc
Q psy11230 310 NKAPLHLVVQRKSWNTTMF-KTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQN 388 (553)
Q Consensus 310 ~~~~l~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 388 (553)
..+.++.++..+.. +.+ ++|.+.+..++.+|..|+||||+|+..|+.+++++|++.+......+..+.++++.++..
T Consensus 3 ~~~~~~~~a~~G~~--~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (223)
T d1uoha_ 3 SNLMVCNLAYSGKL--EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA 80 (223)
T ss_dssp SSSHHHHHHHTTCH--HHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHhCCH--HHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccc
Confidence 35567767777764 445 555667778888888899999999999999999999888888888888888888888888
Q ss_pred CCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCC
Q psy11230 389 GYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKA 467 (553)
Q Consensus 389 ~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~ 467 (553)
++.+++ .++.++.+++..+..|+||||+|+.+|+.+++++|+++|++++..+..|.||||+|+..++.+++++|.+.|.
T Consensus 81 ~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~ 160 (223)
T d1uoha_ 81 GRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKA 160 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccc
Confidence 888887 6778888888888888899999999999999999998888888888888899999999999889999888888
Q ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHh
Q psy11230 468 NVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLD 534 (553)
Q Consensus 468 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~ 534 (553)
+++..+..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+| ..|+.+++++|+|
T Consensus 161 ~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~----~g~tpl~~A-~~~~~~i~~~Ll~ 222 (223)
T d1uoha_ 161 STNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENK----EEKTPLQVA-KGGLGLILKRMVE 222 (223)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT----TSCCHHHHC-CTTHHHHHHHHHC
T ss_pred eeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCC----CCCCHHHHH-HCCCHHHHhcccC
Confidence 8888888889999999999999999999999998888777 788999887 4688888888886
No 5
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.8e-35 Score=253.12 Aligned_cols=204 Identities=26% Similarity=0.315 Sum_probs=159.2
Q ss_pred CCHHHHHHHcCCHHHHHHHH-hCCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCH
Q psy11230 346 KTPLHIAIESQCWDAVSLLV-KHGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNM 423 (553)
Q Consensus 346 ~t~l~~a~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~ 423 (553)
.+.++.++..|+.+.++.++ +.+..++.+|..|+||||+|+..|+.+++ .++..+.........+.++++.++..++.
T Consensus 4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (223)
T d1uoha_ 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD 83 (223)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccccccccccccccccccccc
Confidence 46677778888877775554 45667777777888888888888888777 45566666666677777888888888888
Q ss_pred HHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcc
Q psy11230 424 SALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADIN 503 (553)
Q Consensus 424 ~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 503 (553)
+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..++.+++++|++.|.+++
T Consensus 84 ~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~ 163 (223)
T d1uoha_ 84 EIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTN 163 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred chhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceee
Confidence 88888888888888788888888888888888888888888888887777778888888888888888888888888877
Q ss_pred cccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 504 AKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 504 ~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
..+. .|.||||.|+.+|+.++|++|+++|++++.+|.+|+||||+|
T Consensus 164 ~~d~----~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A 209 (223)
T d1uoha_ 164 IQDT----EGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 209 (223)
T ss_dssp CCCT----TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC
T ss_pred eccC----CCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 7766 777888888888888888888888888888888888888776
No 6
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.9e-35 Score=261.35 Aligned_cols=228 Identities=25% Similarity=0.260 Sum_probs=182.5
Q ss_pred ccCCCCCchHHHHHhccccChHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcH
Q psy11230 305 TKGPTNKAPLHLVVQRKSWNTTMFKTLLYHGAN---VNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMP 381 (553)
Q Consensus 305 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 381 (553)
..+..|.||||+|+..++. +++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||
T Consensus 4 ~i~~~G~t~Lh~A~~~~~~--~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tp 81 (255)
T d1oy3d_ 4 YVTEDGDTALHLAVIHQHE--PFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (255)
T ss_dssp CCCTTCCCHHHHHHHTTCH--HHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred cCCcCCCCHHHHHHHcCCH--HHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchh
Confidence 4568899999999999976 999999999887 56678889999999999999999999999999999999999999
Q ss_pred HHHHHHcCCchHHHHH-HcCCCCCCCCC----------CCChHHHHHH---hcCCHH-HHHHHHhCCCCccccccCCCCH
Q psy11230 382 LHIAVQNGYVAIPNLI-RHGANVNARNK----------YAKTPLHIAV---EQKNMS-ALNYLLEHGAQVDARTQLGKDP 446 (553)
Q Consensus 382 l~~a~~~~~~~~~~ll-~~~~~~~~~~~----------~~~~~l~~a~---~~~~~~-~~~~Ll~~g~~~~~~~~~~~t~ 446 (553)
|++|+..+..++..++ +.+........ ...+....+. ...... ........+.+++.++..|.||
T Consensus 82 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~Tp 161 (255)
T d1oy3d_ 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (255)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred hhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccc
Confidence 9999999999988655 33322111100 0001111111 111111 1112223466678889999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCC
Q psy11230 447 LYIAVEMHNLSIVEQLLKFKANVNSS-DQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNN 525 (553)
Q Consensus 447 l~~A~~~~~~~~v~~L~~~g~~~~~~-~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~ 525 (553)
||+|+..++.+++++|++++++.+.+ +..|.||||+|+..++.+++++|+++|++++..+. .|.||||+|+.+|+
T Consensus 162 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~----~g~t~L~~A~~~~~ 237 (255)
T d1oy3d_ 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY----GGRTPLGSALLRPN 237 (255)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----TSCCHHHHHHTSSC
T ss_pred ccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCC----CCCCHHHHHHHCCC
Confidence 99999999999999999999988754 57899999999999999999999999999999887 89999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy11230 526 EAVINKLLDYNPD 538 (553)
Q Consensus 526 ~~~v~~Ll~~g~~ 538 (553)
.+++++|+++||+
T Consensus 238 ~~i~~~Ll~~Ga~ 250 (255)
T d1oy3d_ 238 PILARLLRAHGAP 250 (255)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999996
No 7
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.2e-34 Score=259.25 Aligned_cols=274 Identities=27% Similarity=0.337 Sum_probs=211.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhhc
Q psy11230 11 EGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASIK 89 (553)
Q Consensus 11 ~g~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 89 (553)
++.|+|++|+..|++++|++|++.|++++.+.+..|.||||+|+..|+ +++++|++.+......+..+.+|.++++..
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~- 82 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA- 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH-
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhc-
Confidence 467999999999999999999999999998867789999999999999 999999999999999999999999999998
Q ss_pred CCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHhCCCCccccCC
Q psy11230 90 TRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENN 169 (553)
Q Consensus 90 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~~~~~~~~~~~~ 169 (553)
+..+...++++...+....+..+.|++++|+..|+..+++.++....+++......... .....
T Consensus 83 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 146 (285)
T d1wdya_ 83 -GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ---------------ERLRK 146 (285)
T ss_dssp -TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHH---------------HHTTC
T ss_pred -CCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhh---------------hhhcc
Confidence 99999999999988888888999999999999999999999999887766544332211 12345
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHc-CCCccchhccccccCCchhhHHHH----HcCCHHHHHHHHHcCCCCcCCCCCCCc
Q psy11230 170 FGKTAFQMAYEMKNFPAIELFLKY-GVNVEQCVCHENVKHGGQLLLHLV----RNGHQNAVKLILEKGANVHAKDQLCKT 244 (553)
Q Consensus 170 ~~~~~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~l~~a~----~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 244 (553)
.|.|||++|+..|+.+++++|++. |++++.. ...+.++...+. ..+..+++++|+++|++++.++..|.|
T Consensus 147 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t 221 (285)
T d1wdya_ 147 GGATALMDAAEKGHVEVLKILLDEMGADVNAC-----DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT 221 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCC-----CTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred cCchHHHHHHHcCCHHHHHHHHhccCCCcccc-----cCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCC
Confidence 677788888888877777777754 4444321 122223333322 233345667777777777666666777
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcccccCCHHHHHHHhCCHHHHHHHHHhcCCCCCccccCCCCCchHHHHHhccccC
Q psy11230 245 ALDIAVEHGHLKIVEFLLDHGACVDSLQFIHSPLHLAIEKQHIAIVQLLLRRNNNNININTKGPTNKAPLHLVVQRKSWN 324 (553)
Q Consensus 245 ~l~~A~~~~~~e~v~~Ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 324 (553)
|||+|+..|+.+++++|+++
T Consensus 222 ~L~~a~~~~~~~~v~~lL~~------------------------------------------------------------ 241 (285)
T d1wdya_ 222 PLILAVEKKHLGLVQRLLEQ------------------------------------------------------------ 241 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHS------------------------------------------------------------
T ss_pred ccchhhhcCcHHHHHHHHHc------------------------------------------------------------
Confidence 77777776666666666643
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccC
Q psy11230 325 TTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVID 375 (553)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~ 375 (553)
.|.+++..|.+|.||||+|++.|+.+++++|+++|++++..|
T Consensus 242 ---------~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d 283 (285)
T d1wdya_ 242 ---------EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp ---------SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred ---------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence 134455567778888888888888888888888888888765
No 8
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=5.6e-35 Score=258.23 Aligned_cols=242 Identities=19% Similarity=0.200 Sum_probs=166.1
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHH
Q psy11230 8 TNKEGITLFQQAIVSSQTPIAKLLAERGAN---INDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLH 83 (553)
Q Consensus 8 ~~~~g~~~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~ 83 (553)
.|++|.||||.||..|+.++|++|++.|++ ++.+ +..|+||||+|+..|+ +++++|++.|++++..|..|+||||
T Consensus 5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~-~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~ 83 (255)
T d1oy3d_ 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALH 83 (255)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCc-CCCCCCccchHHhhcccccccccccccccccccccccchhhh
Confidence 467778888888888888888888877766 3344 6677777777777777 7777777777777777777777777
Q ss_pred HHHhhcCCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHhCCCC
Q psy11230 84 TVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGAD 163 (553)
Q Consensus 84 ~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~~~~~~ 163 (553)
+|+.. ++.+++++|++.+...+..... ........-..+............. ............+..
T Consensus 84 ~A~~~--~~~~~~~~Ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 150 (255)
T d1oy3d_ 84 LACRV--RAHTCACVLLQPRPSHPRDASD---TYLTQSQDCTPDTSHAPAAVDSQPN--------PENEEEPRDEDWRLQ 150 (255)
T ss_dssp HHTTT--TCHHHHHHHSSSCCSSCCCC----------------------------------------------CCCGGGG
T ss_pred hhhcc--CchHHHHHHHhhccchhcccch---hhhhHHhhhcccchHHHHHHHhhcc--------hhHHHHHHhhhcCcc
Confidence 77776 7777777777765433221111 1111111000000000000000000 000001122233445
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccchhccccccCCchhhHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC
Q psy11230 164 INVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCK 243 (553)
Q Consensus 164 ~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 243 (553)
++.++..|.|||++|+..++.+++++|++.++.... .....+.+||+.|+..|+.+++++|+++|++++.++..|+
T Consensus 151 in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~ 226 (255)
T d1oy3d_ 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK----PEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGR 226 (255)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC----CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cccccccCcccccccccccccccccchhcccccccc----cccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCC
Confidence 677888999999999999999999999999888764 2245678899999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCC
Q psy11230 244 TALDIAVEHGHLKIVEFLLDHGAC 267 (553)
Q Consensus 244 ~~l~~A~~~~~~e~v~~Ll~~~~~ 267 (553)
|||++|+..++.+++++|+++|++
T Consensus 227 t~L~~A~~~~~~~i~~~Ll~~Ga~ 250 (255)
T d1oy3d_ 227 TPLGSALLRPNPILARLLRAHGAP 250 (255)
T ss_dssp CHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999985
No 9
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=1.2e-33 Score=253.23 Aligned_cols=270 Identities=24% Similarity=0.306 Sum_probs=162.5
Q ss_pred CcHHHHHHhhcCCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHH
Q psy11230 79 NTVLHTVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILL 158 (553)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~ 158 (553)
.||||++++. .++.++++.|.+.+++.... .+|+||||+||..|+.++|++|+.+
T Consensus 1 ~~p~~~~~~~-~~~~~~~~~l~~~~~n~~~~-~~g~T~Lh~A~~~g~~~~v~~Ll~~----------------------- 55 (277)
T d2fo1e1 1 ESPIKLHTEA-AGSYAITEPITRESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVH----------------------- 55 (277)
T ss_dssp CCCCHHHHHH-HSSSCCCSCCSTTTTTTCCC-SSCCCHHHHHHCTTCCSCCTTHHHH-----------------------
T ss_pred CChHHHHHHh-CCCHHHHHHHHhcCCCcCCC-CCCccHHHHHHHcCCHHHHHHHHhc-----------------------
Confidence 3788877665 38888888888877665332 3588999999999999999888753
Q ss_pred hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccchhccccccCCchhhHHHHHcCCHHHHHHHHHcCCCCcCC
Q psy11230 159 RKGADINVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAK 238 (553)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~~~~~~~~ 238 (553)
..+.+++.|++++.+
T Consensus 56 -----------------------------------------------------------------~~~~~l~~Gadvn~~ 70 (277)
T d2fo1e1 56 -----------------------------------------------------------------EAKECIAAGADVNAM 70 (277)
T ss_dssp -----------------------------------------------------------------HHHHHHHTCCCTTCC
T ss_pred -----------------------------------------------------------------chhHHHHcCCCcccc
Confidence 123445555555556
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc-cCCHHHHHHHhCCHHHHHHHHHhcCCCCCccccCCCCCchHHHH
Q psy11230 239 DQLCKTALDIAVEHGHLKIVEFLLDHGACVDSLQF-IHSPLHLAIEKQHIAIVQLLLRRNNNNININTKGPTNKAPLHLV 317 (553)
Q Consensus 239 ~~~~~~~l~~A~~~~~~e~v~~Ll~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 317 (553)
+.+|+||||+|+..|+.+++++|+++|+++..... +.+|++.|...++.++++++...
T Consensus 71 d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~--------------------- 129 (277)
T d2fo1e1 71 DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS--------------------- 129 (277)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS---------------------
T ss_pred CCCCCeeeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhc---------------------
Confidence 66666666666666666666666555554433221 33333333333333333333211
Q ss_pred HhccccChHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH---HHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHH
Q psy11230 318 VQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWD---AVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIP 394 (553)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~---~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 394 (553)
.... ..++..+....++.+.+...+..+ .++.+.+........
T Consensus 130 --------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 175 (277)
T d2fo1e1 130 --------TKLK------GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD-------------------- 175 (277)
T ss_dssp --------HHHH------HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC--------------------
T ss_pred --------cccc------ccccccccccchhHHHHHhccccccccccccccccccccccc--------------------
Confidence 0000 123444555666666666655433 222232221111100
Q ss_pred HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHH-hCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCC
Q psy11230 395 NLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLL-EHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSD 473 (553)
Q Consensus 395 ~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~ 473 (553)
.....+..+..|.|||++++..++.+++++++ ..+.+.+.++..|+||||+|++.|+.+++++|+++|++++.+|
T Consensus 176 ----~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d 251 (277)
T d2fo1e1 176 ----GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD 251 (277)
T ss_dssp ----SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred ----ccccccccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcC
Confidence 01122344556777777777777777777654 4667777777777777777777777777777777777777777
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHh
Q psy11230 474 QFGRTVLHLAVKIQNVAILECLLV 497 (553)
Q Consensus 474 ~~~~t~l~~A~~~~~~~~~~~Ll~ 497 (553)
..|+||||+|+.+|+.+++++|++
T Consensus 252 ~~G~T~L~~A~~~~~~~iv~lL~~ 275 (277)
T d2fo1e1 252 ATDHTARQLAQANNHHNIVDIFDR 275 (277)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH
Confidence 777777777777777777777764
No 10
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=7.3e-34 Score=254.65 Aligned_cols=204 Identities=24% Similarity=0.332 Sum_probs=174.9
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHHHHHHcC----CC
Q psy11230 327 MFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRHG----AN 402 (553)
Q Consensus 327 ~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ll~~~----~~ 402 (553)
..+.+++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||++.|+..+..++..++... ..
T Consensus 56 ~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 135 (277)
T d2fo1e1 56 EAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD 135 (277)
T ss_dssp HHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT
T ss_pred chhHHHHcCCCccccCCCCCeeeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhccccccc
Confidence 34567788999999999999999999999999999999999999999999999999999999998888655332 34
Q ss_pred CCCCCCCCChHHHHHHhcCCH---HHHHHHHhCCC--------CccccccCCCCHHHHHHHhCCHHHHHHHH-hcCCCCC
Q psy11230 403 VNARNKYAKTPLHIAVEQKNM---SALNYLLEHGA--------QVDARTQLGKDPLYIAVEMHNLSIVEQLL-KFKANVN 470 (553)
Q Consensus 403 ~~~~~~~~~~~l~~a~~~~~~---~~~~~Ll~~g~--------~~~~~~~~~~t~l~~A~~~~~~~~v~~L~-~~g~~~~ 470 (553)
++..+..+.++.+.+...+.. ..+.++.+... ..+..+..|.|||++++..++.+++++++ ..+.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~ 215 (277)
T d2fo1e1 136 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 215 (277)
T ss_dssp TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT
T ss_pred ccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcccccccccccccccccccccccccc
Confidence 566677788999988887654 34555544322 23445667999999999999999999755 5688899
Q ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHh
Q psy11230 471 SSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLD 534 (553)
Q Consensus 471 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~ 534 (553)
.++..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+++|+.++|++|++
T Consensus 216 ~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~----~G~T~L~~A~~~~~~~iv~lL~~ 275 (277)
T d2fo1e1 216 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA----TDHTARQLAQANNHHNIVDIFDR 275 (277)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS----SSCCHHHHHHHTTCHHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCC----CCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999887 89999999999999999999986
No 11
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=1.2e-32 Score=248.33 Aligned_cols=204 Identities=28% Similarity=0.358 Sum_probs=152.9
Q ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCHH
Q psy11230 346 KTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNMS 424 (553)
Q Consensus 346 ~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 424 (553)
.|+|+.|+..|+.++|++|+++|++++..+..|+||||+|+..|+.+++ .|++++.+....+..+.+||+.++..++.+
T Consensus 41 ~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~ 120 (291)
T d1s70b_ 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD 120 (291)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred chHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccc
Confidence 3566666666666666666666666666666666666666666666655 455566666555566666666666666666
Q ss_pred HHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHh---------------------------cCCCCCCCCCCCC
Q psy11230 425 ALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLK---------------------------FKANVNSSDQFGR 477 (553)
Q Consensus 425 ~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~---------------------------~g~~~~~~~~~~~ 477 (553)
++++|+++|...+..+..+.+++++|+..++.++++.++. ...+....+..|.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 200 (291)
T d1s70b_ 121 IAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG 200 (291)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred hhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCC
Confidence 6666666666666666666666666666666665555553 2334456778899
Q ss_pred cHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 478 TVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 478 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
|||++|+..++.+++++|+++|++++..+. .|.||||+|++.|+.++|++|+++|++++.+|.+|+||||+|
T Consensus 201 t~L~~a~~~~~~~~~~~Ll~~g~din~~~~----~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A 272 (291)
T d1s70b_ 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDY----DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (291)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCTTCCCT----TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred ChhhHHHHcCChhhhcccccceeccccccc----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 999999999999999999999999998877 899999999999999999999999999999999999999997
No 12
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.1e-32 Score=239.04 Aligned_cols=218 Identities=26% Similarity=0.331 Sum_probs=181.9
Q ss_pred chHHHHHhccccChHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc---cCCCCCcHHHHHHH
Q psy11230 312 APLHLVVQRKSWNTTMFKTLLY-HGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNV---IDNQGQMPLHIAVQ 387 (553)
Q Consensus 312 ~~l~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~---~~~~~~~~l~~a~~ 387 (553)
+|||+|+..+.. ++++.|++ .+..++.+|.+|+||||+|+..|+.+++++|+++|++++. .+..|.+++++++.
T Consensus 2 ~pLh~A~~~g~~--~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 79 (229)
T d1ixva_ 2 YPLHQACMENEF--FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 79 (229)
T ss_dssp CHHHHHHHHTCH--HHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HhHHHHHHcCCH--HHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccc
Confidence 344444444432 44443333 3456677888999999999999999999999999988764 45678899999999
Q ss_pred cCCchHH-HHHHcCCC--CCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHh
Q psy11230 388 NGYVAIP-NLIRHGAN--VNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLK 464 (553)
Q Consensus 388 ~~~~~~~-~ll~~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~ 464 (553)
.+..++. .++..+.. ....+..+.++++.++..++.+++++|++.|.+.+..+..|+||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 159 (229)
T d1ixva_ 80 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 159 (229)
T ss_dssp HTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccc
Confidence 9888877 44555554 34456678899999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHh-ccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCC
Q psy11230 465 FK-ANVNSSDQFGRTVLHLAVKIQNVAILECLLV-NKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPD 538 (553)
Q Consensus 465 ~g-~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~ 538 (553)
++ .+++.++..|+||||+|+.+++.+++++|++ .|++++..+. .|.||||+|+. .+++++|+++|+|
T Consensus 160 ~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~----~g~t~l~~A~~---~~~~~~Ll~~g~d 228 (229)
T d1ixva_ 160 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN----KGAKAEDVALN---EQVKKFFLNNVVD 228 (229)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCT----TSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred cccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCC----CCCCHHHHHhh---HHHHHHHHHcCCC
Confidence 87 5788999999999999999999999999997 5999999887 89999999985 4799999999997
No 13
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=3e-33 Score=252.33 Aligned_cols=234 Identities=26% Similarity=0.289 Sum_probs=180.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhh
Q psy11230 10 KEGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASI 88 (553)
Q Consensus 10 ~~g~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 88 (553)
.+|.|||+.||..|+.++|++|++.|++++.. +.+|.||||+|+.+|+ ++|++|+++|++....+..+.+||++++..
T Consensus 38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~-d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~ 116 (291)
T d1s70b_ 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYA-NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (291)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCCCcc-CCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccc
Confidence 45679999999999999999999999999988 9999999999999999 999999999999999999999999999999
Q ss_pred cCCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHH-HHHHHhCCCCccc
Q psy11230 89 KTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDH-GAHTECKNHQGYNALHVA-VGILLRKGADINV 166 (553)
Q Consensus 89 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~t~l~~~-~~~l~~~~~~~~~ 166 (553)
++.++++.|+++|...+..+..+.+|+++|+..+..++++.++.. +.++.........+.... ...+.........
T Consensus 117 --~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (291)
T d1s70b_ 117 --GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (291)
T ss_dssp --TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred --cccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhccccccccc
Confidence 999999999999999999999999999999999999999999964 333322222222222222 2334444444555
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccchhccccccCCchhhHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCcHH
Q psy11230 167 ENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCHENVKHGGQLLLHLVRNGHQNAVKLILEKGANVHAKDQLCKTAL 246 (553)
Q Consensus 167 ~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~l 246 (553)
.+..+.|||+.|+..|+.++++.|++.|++++. ....+.+||+.|+..|+.++|++|+++|++++.+|..|.|||
T Consensus 195 ~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~-----~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL 269 (291)
T d1s70b_ 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI-----KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269 (291)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-----CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred ccCCCCChhhHHHHcCChhhhcccccceecccc-----cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 566677777777777777777777766666543 133455666666666666666666666666666666666666
Q ss_pred HHHHH
Q psy11230 247 DIAVE 251 (553)
Q Consensus 247 ~~A~~ 251 (553)
++|++
T Consensus 270 ~~A~e 274 (291)
T d1s70b_ 270 DVADE 274 (291)
T ss_dssp TSCCS
T ss_pred HHHHH
Confidence 66643
No 14
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.5e-31 Score=231.79 Aligned_cols=204 Identities=25% Similarity=0.318 Sum_probs=186.1
Q ss_pred CCHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCC---CCCCCChHHHHHHhc
Q psy11230 346 KTPLHIAIESQCWDAVSLLVKH-GADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNA---RNKYAKTPLHIAVEQ 420 (553)
Q Consensus 346 ~t~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~---~~~~~~~~l~~a~~~ 420 (553)
.+|||+|+..|+.+.++.|++. +..++.++.+|+||||+|+..|+.+++ .|+++|++++. .+..|.+|+++++..
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 80 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 80 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence 3799999999999999998874 678889999999999999999999988 66688888764 466789999999999
Q ss_pred CCHHHHHHHHhCCCCc--cccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc
Q psy11230 421 KNMSALNYLLEHGAQV--DARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVN 498 (553)
Q Consensus 421 ~~~~~~~~Ll~~g~~~--~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 498 (553)
+..++++.++..+... ...+..+.++++.++..++.+++++|++.|.+.+..+..|+|||++|+..++.+++++|++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 160 (229)
T d1ixva_ 81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 160 (229)
T ss_dssp TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccccc
Confidence 9999999999887654 44666789999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCcccccccccCCCCcHHHHHHhhCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCC
Q psy11230 499 K-ADINAKIISGIWKGYTPLHLAVESNNEAVINKLLD-YNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 499 g-~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~t~l~~a 553 (553)
| .+++..+. .|.||||+|+.+|+.++|++|++ .|++++.+|.+|.||||+|
T Consensus 161 ~~~~in~~d~----~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A 213 (229)
T d1ixva_ 161 GKSAVNWQDK----QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA 213 (229)
T ss_dssp TCCCSCCCCT----TSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGC
T ss_pred cccccccccc----ccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHH
Confidence 7 57787766 89999999999999999999997 5999999999999999987
No 15
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.97 E-value=2.2e-30 Score=221.03 Aligned_cols=204 Identities=29% Similarity=0.344 Sum_probs=186.3
Q ss_pred hHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHHHHHHc--CC
Q psy11230 325 TTMFKTLLYHGANVNV-KDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRH--GA 401 (553)
Q Consensus 325 ~~~~~~l~~~~~~~~~-~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ll~~--~~ 401 (553)
.+++++|+++|++++. .|.+|.||||+|+..|+.+++++|++.|++++..+..+.++++.++..+.......... ..
T Consensus 2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (209)
T d1ot8a_ 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT 81 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence 3899999999999987 58899999999999999999999999999999999999999999999988876644433 22
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy11230 402 NVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLH 481 (553)
Q Consensus 402 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~ 481 (553)
........+.++.+.+.........+.|.+.+++++..+..|+||+++++..+..++++.+++++.+++..+..|.||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~ 161 (209)
T d1ot8a_ 82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF 161 (209)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccc
Confidence 23334556789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHH
Q psy11230 482 LAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKL 532 (553)
Q Consensus 482 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~L 532 (553)
+|+..|+.+++++|+++|+|++..+. .|.||||+|+++|+.++|++|
T Consensus 162 ~A~~~g~~~~v~~Ll~~gad~n~~d~----~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 162 LAAREGSYEASKALLDNFANREITDH----MDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCT----TSCCHHHHHHHTTCHHHHHHH
T ss_pred hhccccHHHHHHHHHHCCCCCCCcCC----CCCCHHHHHHHcCCHHHHhhc
Confidence 99999999999999999999998877 899999999999999999986
No 16
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=2.4e-30 Score=222.18 Aligned_cols=191 Identities=30% Similarity=0.382 Sum_probs=153.1
Q ss_pred CCCCHHHHHHHcCCH----HHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHH
Q psy11230 344 ENKTPLHIAIESQCW----DAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAV 418 (553)
Q Consensus 344 ~~~t~l~~a~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~ 418 (553)
+|.||||+|+..|+. ++++++...|++++..+..|+||||+|+..++.+++ .++..|++++..+..|.+||+.++
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~ 80 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 80 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 467888888888875 345556667778888888888888888888888877 455778888888888888888888
Q ss_pred hcCCHHHHHHHHhCCCCc------cccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHhCCHHH
Q psy11230 419 EQKNMSALNYLLEHGAQV------DARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSD-QFGRTVLHLAVKIQNVAI 491 (553)
Q Consensus 419 ~~~~~~~~~~Ll~~g~~~------~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~-~~~~t~l~~A~~~~~~~~ 491 (553)
..++.+++++|++.+... ......|.||++.|+..++.+++++|++.|..++..+ .+|.||||+|+..|+.++
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~ 160 (221)
T d1iknd_ 81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 160 (221)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence 888888888888876543 2334457899999999999999999999988887654 568999999999999999
Q ss_pred HHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCC
Q psy11230 492 LECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPD 538 (553)
Q Consensus 492 ~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~ 538 (553)
+++|+++|+|++..+. .|.||||+|++.++.+++++|++.+.+
T Consensus 161 v~~Ll~~gad~~~~~~----~G~tpl~~A~~~~~~~~~~~l~~~~~~ 203 (221)
T d1iknd_ 161 VSLLLKCGADVNRVTY----QGYSPYQLTWGRPSTRIQQQLGQLTLE 203 (221)
T ss_dssp HHHHHTTTCCSCCCCT----TCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred HHHHHhcCCcccccCC----CCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence 9999999999998877 899999999999999999999988764
No 17
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6.4e-30 Score=219.49 Aligned_cols=174 Identities=29% Similarity=0.356 Sum_probs=155.8
Q ss_pred CCCcHHHHHHHcCCchHH-----HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHH
Q psy11230 377 QGQMPLHIAVQNGYVAIP-----NLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAV 451 (553)
Q Consensus 377 ~~~~~l~~a~~~~~~~~~-----~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~ 451 (553)
+|.||||+|+..|..+++ .+...+.+++.++.+|+||||+|+..|+.+++++|+++|++++..+..|.|||++|+
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~ 80 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 80 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 589999999999986433 466789999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCC
Q psy11230 452 EMHNLSIVEQLLKFKANVN------SSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNN 525 (553)
Q Consensus 452 ~~~~~~~v~~L~~~g~~~~------~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~ 525 (553)
..++.++++.|++.+.... .....|.||++.|+..++.+++++|+..|+.++..... .|.||||+|+..|+
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~---~G~T~L~~A~~~g~ 157 (221)
T d1iknd_ 81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPC---NGRTALHLAVDLQN 157 (221)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT---TCCCHHHHHHHTTC
T ss_pred ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCccccccccc---CCCCcccccccccc
Confidence 9999999999999876532 34456889999999999999999999999998877653 69999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 526 EAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 526 ~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
.++|++|+++|+|++.+|.+|.||||+|
T Consensus 158 ~~~v~~Ll~~gad~~~~~~~G~tpl~~A 185 (221)
T d1iknd_ 158 PDLVSLLLKCGADVNRVTYQGYSPYQLT 185 (221)
T ss_dssp HHHHHHHHTTTCCSCCCCTTCCCGGGGC
T ss_pred HHHHHHHHhcCCcccccCCCCCCHHHHH
Confidence 9999999999999999999999999987
No 18
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6e-28 Score=209.19 Aligned_cols=206 Identities=29% Similarity=0.403 Sum_probs=127.1
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHh----CCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHH
Q psy11230 344 ENKTPLHIAIESQCWDAVSLLVK----HGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAV 418 (553)
Q Consensus 344 ~~~t~l~~a~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~ 418 (553)
+|.||||+|+..|+.+++++|++ .|++++.++..|+||||+|+..|+.+++ .|+++|++.+.....+.++++.|.
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~ 81 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 81 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence 45666666666666666665553 5666666666666666666666666655 455666666666666666666666
Q ss_pred hcCCHHHHHHHHhCCC----CccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCC-CCCCCCCcHHHHHHHhCCHHHHH
Q psy11230 419 EQKNMSALNYLLEHGA----QVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVN-SSDQFGRTVLHLAVKIQNVAILE 493 (553)
Q Consensus 419 ~~~~~~~~~~Ll~~g~----~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~-~~~~~~~t~l~~A~~~~~~~~~~ 493 (553)
..++.++++.+..... ..+.......++++.+.........+.|.....+.. .....+.++++.|+..+...+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 161 (228)
T d1k1aa_ 82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ 161 (228)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh
Confidence 6666666665554221 122333445566666666666666666666554432 23445666666666666666666
Q ss_pred HHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 494 CLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 494 ~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
+++++|.+++..+. .|.||||+|+.+|+.++|++|+++|++++++|.+|+||||+|
T Consensus 162 ~~~~~~~~~~~~d~----~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A 217 (228)
T d1k1aa_ 162 LLLQHGANVNAQMY----SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 217 (228)
T ss_dssp HHHHTTCCTTCBCT----TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTC
T ss_pred hhhhhccccccccc----cCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 66666666666555 566666666666666666666666666666666666666665
No 19
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2.6e-28 Score=211.52 Aligned_cols=215 Identities=28% Similarity=0.394 Sum_probs=181.6
Q ss_pred CCchHHHHHhccccChHHHHH----HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHH
Q psy11230 310 NKAPLHLVVQRKSWNTTMFKT----LLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIA 385 (553)
Q Consensus 310 ~~~~l~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a 385 (553)
|.||||+|+..++. ++++. +.+.|.+++..|..|+||||+|+..|+.+++++|+++|++.+.....+.++++.|
T Consensus 3 G~TpLh~A~~~g~~--~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a 80 (228)
T d1k1aa_ 3 GDTPLHIAVVQGNL--PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA 80 (228)
T ss_dssp TCCHHHHHHHTTCH--HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CccHHHHHHHcCCH--HHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence 44444444444433 33333 4468899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCchHHHHH-HcC----CCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCc-cccccCCCCHHHHHHHhCCHHHH
Q psy11230 386 VQNGYVAIPNLI-RHG----ANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQV-DARTQLGKDPLYIAVEMHNLSIV 459 (553)
Q Consensus 386 ~~~~~~~~~~ll-~~~----~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~~~~t~l~~A~~~~~~~~v 459 (553)
...+...+.... ... ...+.......++++.+.........+.|.....+. ......+.++++.|+..+..+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 160 (228)
T d1k1aa_ 81 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 160 (228)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred cccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhh
Confidence 999998877433 221 223344556789999999999999999999876654 34556789999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHH
Q psy11230 460 EQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVIN 530 (553)
Q Consensus 460 ~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~ 530 (553)
++++++|.+++.++..|.|||++|+.+|+.+++++|+++|+|++..+. .|.||||+|+++|+.++|+
T Consensus 161 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~----~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 161 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC----HNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----TSCCTTTTCSSHHHHHHHT
T ss_pred hhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCC----CCCCHHHHHHhCCCccccC
Confidence 999999999999999999999999999999999999999999999887 8999999999999999885
No 20
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.96 E-value=5.6e-32 Score=247.47 Aligned_cols=240 Identities=10% Similarity=-0.016 Sum_probs=168.3
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHH---HHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccC--CC
Q psy11230 4 DVNATNKEGITLFQQAIVSSQTPIAKL---LAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVD--NL 77 (553)
Q Consensus 4 ~~~~~~~~g~~~l~~A~~~g~~~~v~~---Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~--~~ 77 (553)
+++.++.+|.|||++|+..|+.++|++ |++.|++++.. +.+|.||||+||.+|+ ++|++|++.|++++..+ ..
T Consensus 82 ~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~-~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~ 160 (346)
T d2ajaa1 82 DAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVI-QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE 160 (346)
T ss_dssp HHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC---CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH
T ss_pred HHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCccccc-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccC
Confidence 456788999999999999999887766 78999999988 8899999999999999 99999999999998875 46
Q ss_pred CCcHHHHHHhhcCCChHHHHHHhhCCCCc---cCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy11230 78 GNTVLHTVASIKTRDPTAVEILKTNRANV---NIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAV 154 (553)
Q Consensus 78 ~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~---~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~ 154 (553)
|+||||+|+.. |+.++|++|++.|.+. +..+..+.||++.|+.+|+.++|++|++.|++++..+....++.
T Consensus 161 g~t~L~~Aa~~--g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~---- 234 (346)
T d2ajaa1 161 NYHAFRLAAEN--GHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYG---- 234 (346)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTT----
T ss_pred CCChhHHHHHH--hhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcC----
Confidence 89999999998 9999999999998765 33445577888999999999999999999887654332222211
Q ss_pred HHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccchhcc----ccccCCchhhHHHHHcCCHHHHHHHHH
Q psy11230 155 GILLRKGADINVENNFGKTAFQMAYEMKNFPAIELFLKYGVNVEQCVCH----ENVKHGGQLLLHLVRNGHQNAVKLILE 230 (553)
Q Consensus 155 ~~l~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~----~~~~~~~~~l~~a~~~g~~~~v~~Ll~ 230 (553)
....+++..+...+..+....+............. .......++++.++..|..+++++|++
T Consensus 235 --------------~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~ 300 (346)
T d2ajaa1 235 --------------EKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLS 300 (346)
T ss_dssp --------------TTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHT
T ss_pred --------------cHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHh
Confidence 11123333333333333322222211111000000 000111245666777888888999888
Q ss_pred cCCC-----CcCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy11230 231 KGAN-----VHAKDQLCKTALDIAVEHGHLKIVEFLLDH 264 (553)
Q Consensus 231 ~~~~-----~~~~~~~~~~~l~~A~~~~~~e~v~~Ll~~ 264 (553)
.+.. ....+.+|.||||+|++.|+.++|++|++.
T Consensus 301 ~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 301 IPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339 (346)
T ss_dssp STTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred CcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence 7643 233445678899999999999999988864
No 21
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.95 E-value=8.7e-27 Score=198.44 Aligned_cols=187 Identities=29% Similarity=0.388 Sum_probs=157.2
Q ss_pred CCCCCchHHHHHhccccChHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCCCcHHHHH
Q psy11230 307 GPTNKAPLHLVVQRKSWNTTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGAD-VNVIDNQGQMPLHIA 385 (553)
Q Consensus 307 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~l~~a 385 (553)
+..|.||||+|+..++. +++++|++.|.+++..+..+.++++.++..++............. .......+.++.+.+
T Consensus 20 d~~G~t~L~~A~~~g~~--e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (209)
T d1ot8a_ 20 DKTGETSLHLAARFARA--DAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILA 97 (209)
T ss_dssp HHHCCCHHHHHHHTTCH--HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCH--HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45566666666666654 677777777778888888888999999988888877766655333 333445677888888
Q ss_pred HHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHh
Q psy11230 386 VQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLK 464 (553)
Q Consensus 386 ~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~ 464 (553)
.......+. .+...+.+++.++..|+|||+.++.++..++++.+++.+.+++..+..|.||||+|+..|+.+++++|++
T Consensus 98 ~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 177 (209)
T d1ot8a_ 98 ARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLD 177 (209)
T ss_dssp HHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHH
Confidence 888877777 5678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHhCCHHHHHHH
Q psy11230 465 FKANVNSSDQFGRTVLHLAVKIQNVAILECL 495 (553)
Q Consensus 465 ~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 495 (553)
+|++++.+|..|+||||+|+++|+.++|++|
T Consensus 178 ~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 178 NFANREITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 9999999999999999999999999999986
No 22
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=7.6e-27 Score=188.32 Aligned_cols=151 Identities=28% Similarity=0.341 Sum_probs=104.9
Q ss_pred HHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHH
Q psy11230 381 PLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIV 459 (553)
Q Consensus 381 ~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v 459 (553)
+||.|+..|+.+++ .|+++|++++.++..|+||||+|+ .++.+++++|+++|++++..+..+.++++.++..++.+++
T Consensus 4 ~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~ 82 (156)
T d1ihba_ 4 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTL 82 (156)
T ss_dssp HHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCcccccccccccccccc
Confidence 33333333333333 222334444444555666666554 5677777777777777777777777888888888888888
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC-CcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcC
Q psy11230 460 EQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKA-DINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYN 536 (553)
Q Consensus 460 ~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g 536 (553)
++|++++.+++..+..|.+|+++|+..++.+++++|+++|+ +++..+. .|.||||+|++.|+.++|++|+++|
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~----~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 83 QTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH----KGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT----TSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC----CCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 88887777777777777888888888888888888777775 5666555 6778888888888888888888776
No 23
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.8e-26 Score=186.08 Aligned_cols=152 Identities=25% Similarity=0.317 Sum_probs=143.4
Q ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCCHHH
Q psy11230 347 TPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKNMSA 425 (553)
Q Consensus 347 t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 425 (553)
++||+|+..|+.+++++|+++|++++.++..|+||||+|+ .++.++. .+++.+++++..+..+.++++.++..+..+.
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~ 81 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT 81 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence 6899999999999999999999999999999999999886 6777777 7789999999999999999999999999999
Q ss_pred HHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc
Q psy11230 426 LNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKA-NVNSSDQFGRTVLHLAVKIQNVAILECLLVNK 499 (553)
Q Consensus 426 ~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~-~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 499 (553)
+++|++.+.+++..+..|.+|+++|+..++.+++++|++++. +++.++..|.||||+|+..++.+++++|+++|
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999986 78899999999999999999999999999987
No 24
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=2.2e-26 Score=184.89 Aligned_cols=152 Identities=18% Similarity=0.232 Sum_probs=136.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHhcCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhhcCC
Q psy11230 13 ITLFQQAIVSSQTPIAKLLAER-GANINDPFPDDGKSCLHIAATKNIRLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTR 91 (553)
Q Consensus 13 ~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~l~~A~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 91 (553)
.+.|+.||..|+.++|++|++. +++++.. +..|.||||+|+..+.+++++|++.+.+++..+..|.+|++.++.. +
T Consensus 3 g~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~-d~~g~t~L~~A~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~--~ 79 (156)
T d1bd8a_ 3 GDRLSGAAARGDVQEVRRLLHRELVHPDAL-NRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAART--G 79 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCC-CTTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT--T
T ss_pred cHHHHHHHHcCCHHHHHHHHHhCCCCCCcc-CCCCCccccccccccccccccccccccccccccccccccccccccc--c
Confidence 4569999999999999999985 7888887 8999999999986444999999999999999999999999999998 9
Q ss_pred ChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHhCCCCccccCCCC
Q psy11230 92 DPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNFG 171 (553)
Q Consensus 92 ~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~~~~~~~~~~~~~~ 171 (553)
+.++++++++.|++++.++..|+||||+|+..|+.+++++|+ .|++++.+ +..|
T Consensus 80 ~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~-------------------------d~~G 133 (156)
T d1bd8a_ 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRR-------------------------DARG 133 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCC-------------------------CTTS
T ss_pred cccccccccccccccccccCCCCeeecccccccccccccccc-cccccccc-------------------------CCCC
Confidence 999999999999999999999999999999999999999887 56666544 4556
Q ss_pred CCHHHHHHHcCCHHHHHHHHHc
Q psy11230 172 KTAFQMAYEMKNFPAIELFLKY 193 (553)
Q Consensus 172 ~~~l~~A~~~g~~~~~~~Ll~~ 193 (553)
.|||++|+..|+.+++++|+++
T Consensus 134 ~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 134 LTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhh
Confidence 7788899999999999999875
No 25
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=2.4e-26 Score=184.67 Aligned_cols=130 Identities=25% Similarity=0.373 Sum_probs=85.7
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcH
Q psy11230 400 GANVNARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTV 479 (553)
Q Consensus 400 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~ 479 (553)
+.+++..+..|+||||+|+ .++.+++++|++++.+++..+..|.+|++.++..++.+++++++++|++++.++..|.||
T Consensus 26 ~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~ 104 (156)
T d1bd8a_ 26 LVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALP 104 (156)
T ss_dssp CCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCH
T ss_pred CCCCCccCCCCCccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCee
Confidence 3444455555566666554 356666666666666666666666677777777777777777777776666666667777
Q ss_pred HHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhc
Q psy11230 480 LHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDY 535 (553)
Q Consensus 480 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 535 (553)
||+|+..|+.+++++|+ .|++++..+. .|.||||+|++.|+.+++++|+++
T Consensus 105 L~~A~~~~~~~i~~~L~-~~~~~~~~d~----~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 105 IHLAVQEGHTAVVSFLA-AESDLHRRDA----RGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHTCHHHHHHHH-TTSCTTCCCT----TSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ecccccccccccccccc-ccccccccCC----CCCCHHHHHHHcCCHHHHHHHHhh
Confidence 77777777777776665 4566666555 666777777777777777777664
No 26
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.94 E-value=7e-26 Score=181.94 Aligned_cols=150 Identities=29% Similarity=0.306 Sum_probs=137.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhhcC
Q psy11230 12 GITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASIKT 90 (553)
Q Consensus 12 g~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 90 (553)
+.|||+.||+.|+.++|++|++.|++++ . +..|.||||+|+..++ ++++.++.........+..+.++++.++..
T Consensus 2 ~~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~-~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (153)
T d1awcb_ 2 LGKKLLEAARAGQDDEVRILMANGAPFT-T-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE-- 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-C-CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH--
T ss_pred CCHHHHHHHHCCCHHHHHHHHHcCCCcc-c-ccCCCcccccccccccccccccccccccccccccccccccccccccc--
Confidence 3599999999999999999999999876 4 8899999999999999 999999999888888888999999999998
Q ss_pred CChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHHHHhCCCCccccCCC
Q psy11230 91 RDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVAVGILLRKGADINVENNF 170 (553)
Q Consensus 91 ~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~~~~l~~~~~~~~~~~~~ 170 (553)
.+.++++++.+.|++.+.++..|+||||+|+..|+.++|++|+++|++++.++ ..
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d-------------------------~~ 132 (153)
T d1awcb_ 78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS-------------------------KF 132 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-------------------------TT
T ss_pred ccceeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccC-------------------------CC
Confidence 99999999999999999999999999999999999999999999998877555 45
Q ss_pred CCCHHHHHHHcCCHHHHHHH
Q psy11230 171 GKTAFQMAYEMKNFPAIELF 190 (553)
Q Consensus 171 ~~~~l~~A~~~g~~~~~~~L 190 (553)
|.|||++|+..|+.+++++|
T Consensus 133 g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 133 CKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp SCCHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHhC
Confidence 56778899999999999876
No 27
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.93 E-value=2.4e-26 Score=173.66 Aligned_cols=106 Identities=32% Similarity=0.358 Sum_probs=87.6
Q ss_pred CCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhh
Q psy11230 444 KDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVES 523 (553)
Q Consensus 444 ~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~ 523 (553)
.|||++|++.|+.+++++|+++|++++.++..|+||||+|+..++.+++++|+++|++++..+. .|.||||+|+.+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~----~g~tpLh~A~~~ 78 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK----HHITPLLSAVYE 78 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSS----SCSCHHHHHHTT
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeeccc----ccccchhhhhhc
Confidence 3678888888888888888888888888888888888888888888888888888888887766 788888888888
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 524 NNEAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 524 ~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
|+.++|++|+++|++++.+|.+|.||||+|
T Consensus 79 ~~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a 108 (118)
T d1myoa_ 79 GHVSCVKLLLSKGADKTVKGPDGLTALEAT 108 (118)
T ss_dssp TCCHHHHHHHTTCCCSSSSSSSTCCCCCTC
T ss_pred CchhhhhhhhcccccceeeCCCCCCHHHHH
Confidence 888888888888888888888888888876
No 28
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.6e-26 Score=175.60 Aligned_cols=120 Identities=21% Similarity=0.278 Sum_probs=112.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCC-cHHHHHHhh
Q psy11230 11 EGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGN-TVLHTVASI 88 (553)
Q Consensus 11 ~g~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~-t~l~~a~~~ 88 (553)
.+.++||.|+..|+.++|++|++.|++++.+ +..|.||+|+|+ .|+ +++++|+++|++++..+..+. ||||+|+..
T Consensus 2 p~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~-~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~ 79 (125)
T d1bi7b_ 2 PSADWLATAAARGRVEEVRALLEAGANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAARE 79 (125)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CChhHHHHHHHCCCHHHHHHHHHcCCccccc-cccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence 4678999999999999999999999999988 899999999776 566 999999999999999998876 699999999
Q ss_pred cCCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy11230 89 KTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLID 134 (553)
Q Consensus 89 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 134 (553)
++.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|++
T Consensus 80 --g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 80 --GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp --TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred --ccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999975
No 29
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.93 E-value=5.2e-25 Score=176.75 Aligned_cols=149 Identities=30% Similarity=0.401 Sum_probs=96.7
Q ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCchHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHH
Q psy11230 347 TPLHIAIESQCWDAVSLLVKHGADVNVIDNQGQMPLHIAVQNGYVAIPNLIRHGANVNARNKYAKTPLHIAVEQKNMSAL 426 (553)
Q Consensus 347 t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 426 (553)
|||+.|++.|+.+++++|+++|++++ . +..|+||||+|+..++.+++
T Consensus 4 t~L~~Aa~~g~~~~v~~LL~~ga~~~-~--------------------------------~~~g~t~L~~a~~~~~~~~~ 50 (153)
T d1awcb_ 4 KKLLEAARAGQDDEVRILMANGAPFT-T--------------------------------DWLGTSPLHLAAQYGHFSTT 50 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-C--------------------------------CTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCcc-c--------------------------------ccCCCccccccccccccccc
Confidence 66777777777777777776666544 2 34455666666666666666
Q ss_pred HHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCccccc
Q psy11230 427 NYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAILECLLVNKADINAKI 506 (553)
Q Consensus 427 ~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 506 (553)
+.++............+.++++.++...+.++++++.++|++++.++..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d 130 (153)
T d1awcb_ 51 EVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS 130 (153)
T ss_dssp HHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cccccccccccccccccccccccccccccceeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccC
Confidence 66666555555555556666666666666666666666666666666666666666666666666666666666666655
Q ss_pred ccccCCCCcHHHHHHhhCCHHHHHHH
Q psy11230 507 ISGIWKGYTPLHLAVESNNEAVINKL 532 (553)
Q Consensus 507 ~~~~~~~~t~l~~A~~~~~~~~v~~L 532 (553)
. .|.||||+|+.+|+.+++++|
T Consensus 131 ~----~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 131 K----FCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp T----TSCCHHHHHHHTTCHHHHHHH
T ss_pred C----CCCCHHHHHHHcCCHHHHHhC
Confidence 5 566666666666666666654
No 30
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=7.3e-26 Score=173.10 Aligned_cols=121 Identities=24% Similarity=0.251 Sum_probs=113.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCC-cHHHHHHHhCC
Q psy11230 410 AKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGR-TVLHLAVKIQN 488 (553)
Q Consensus 410 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~-t~l~~A~~~~~ 488 (553)
+.++||.|+.+|+.+++++|+++|++++..+..|.||+|.|+ .|+.+++++|+++|++++.++..+. +|||+|+++|+
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~ 81 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 81 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 458999999999999999999999999999999999999775 7999999999999999999988776 69999999999
Q ss_pred HHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhc
Q psy11230 489 VAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDY 535 (553)
Q Consensus 489 ~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 535 (553)
.+++++|+++|++++..+. .|.||||+|+++|+.+++++|++.
T Consensus 82 ~~~v~~Ll~~ga~~~~~d~----~G~T~l~~A~~~g~~~~v~~Llsa 124 (125)
T d1bi7b_ 82 LDTLVVLHRAGARLDVRDA----WGRLPVDLAEELGHRDVARYLRAA 124 (125)
T ss_dssp HHHHHHHHHHTCCSSCCCT----TCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred ccccccccccccccccccC----CCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999999999887 899999999999999999999863
No 31
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.92 E-value=2.3e-26 Score=173.72 Aligned_cols=105 Identities=24% Similarity=0.276 Sum_probs=92.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhhcCC
Q psy11230 13 ITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTR 91 (553)
Q Consensus 13 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 91 (553)
.|||++|++.|+.++|++|++.|++++.. +..|.||||+|+..|+ +++++|++.|++++.+|..|+||||+|+.. +
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~-~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~--~ 79 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE--G 79 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCCCCCC-SSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTT--T
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhccccc-cccccccccccccccccccccccccccceeeecccccccchhhhhhc--C
Confidence 47889999999999999999998888887 7888899999988888 888999999888888888889999988888 8
Q ss_pred ChHHHHHHhhCCCCccCCCCCCCcHHHHH
Q psy11230 92 DPTAVEILKTNRANVNIKNKEGDTPLHIA 120 (553)
Q Consensus 92 ~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A 120 (553)
+.+++++|+++|++++.+|.+|.||||+|
T Consensus 80 ~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a 108 (118)
T d1myoa_ 80 HVSCVKLLLSKGADKTVKGPDGLTALEAT 108 (118)
T ss_dssp CCHHHHHHHTTCCCSSSSSSSTCCCCCTC
T ss_pred chhhhhhhhcccccceeeCCCCCCHHHHH
Confidence 88899999998888888888899998887
No 32
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=2.4e-25 Score=171.33 Aligned_cols=123 Identities=22% Similarity=0.170 Sum_probs=113.7
Q ss_pred hHHHHHHhcCCHHHHHHHHhCCCCccccccCCCCHHHHHHHhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCCHHH
Q psy11230 412 TPLHIAVEQKNMSALNYLLEHGAQVDARTQLGKDPLYIAVEMHNLSIVEQLLKFKANVNSSDQFGRTVLHLAVKIQNVAI 491 (553)
Q Consensus 412 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~A~~~~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A~~~~~~~~ 491 (553)
++|+.|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.++
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~ 82 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV 82 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCcccccccccCCCCcHHHHH--HhhCCHHHHHHHHhcCC
Q psy11230 492 LECLLVNKADINAKIISGIWKGYTPLHLA--VESNNEAVINKLLDYNP 537 (553)
Q Consensus 492 ~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A--~~~~~~~~v~~Ll~~g~ 537 (553)
+++|+++|++++..+.. .+.||++.| .+.|+.+++++|++.+.
T Consensus 83 v~~Ll~~ga~v~~~~~~---~~~~~~~~~~a~~~g~~eiv~~L~~~~~ 127 (130)
T d1ycsb1 83 CKFLVESGAAVFAMTYS---DMQTAADKCEEMEEGYTQCSQFLYGVQE 127 (130)
T ss_dssp HHHHHHTTCCTTCCCSS---SCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCcccccCC---CCCCHHHHHHHHHcChHHHHHHHHhHHH
Confidence 99999999999987653 577887655 67799999999997643
No 33
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.92 E-value=4.8e-27 Score=214.52 Aligned_cols=230 Identities=13% Similarity=0.052 Sum_probs=165.4
Q ss_pred cCCCCCchHHHHHhccccC-hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccC--CCCCcHH
Q psy11230 306 KGPTNKAPLHLVVQRKSWN-TTMFKTLLYHGANVNVKDDENKTPLHIAIESQCWDAVSLLVKHGADVNVID--NQGQMPL 382 (553)
Q Consensus 306 ~~~~~~~~l~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~--~~~~~~l 382 (553)
++..+.|||++|+..++.+ .++++.|++.|++++..+..|+||||+|+.+|+.++|++|++.|++++..+ .+|+|||
T Consensus 86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L 165 (346)
T d2ajaa1 86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF 165 (346)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHH
T ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChh
Confidence 3566788888888888651 133445788999999999999999999999999999999999999988765 4589999
Q ss_pred HHHHHcCCchHH-HHHHcCCCCC---CCCCCCChHHHHHHhcCCHHHHHHHHhCCCCccccccCCC-------CHHHHHH
Q psy11230 383 HIAVQNGYVAIP-NLIRHGANVN---ARNKYAKTPLHIAVEQKNMSALNYLLEHGAQVDARTQLGK-------DPLYIAV 451 (553)
Q Consensus 383 ~~a~~~~~~~~~-~ll~~~~~~~---~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~-------t~l~~A~ 451 (553)
|+|+.+|+.+++ .|++.|.+.. ..+..+.||++.|+.+|+.+++++|+++|++++..+..+. ++++.+.
T Consensus 166 ~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d2ajaa1 166 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARH 245 (346)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHh
Confidence 999999999999 5556665542 2334566888889999999999999999887765433322 3444444
Q ss_pred HhCCHHHHHHHHhcCCC--CCCCCC-------CCCcHHHHHHHhCCHHHHHHHHhccCCcccccc-cccCCCCcHHHHHH
Q psy11230 452 EMHNLSIVEQLLKFKAN--VNSSDQ-------FGRTVLHLAVKIQNVAILECLLVNKADINAKII-SGIWKGYTPLHLAV 521 (553)
Q Consensus 452 ~~~~~~~v~~L~~~g~~--~~~~~~-------~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~~~~~t~l~~A~ 521 (553)
..+..++...+.....+ .+..+. .+.++++.|+..+..+++++|++.+........ .....|.||||+|+
T Consensus 246 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~ 325 (346)
T d2ajaa1 246 VNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLAL 325 (346)
T ss_dssp HHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHH
T ss_pred hccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHH
Confidence 44444444433332221 222222 134678888889999999999998764332221 11226889999999
Q ss_pred hhCCHHHHHHHHhc
Q psy11230 522 ESNNEAVINKLLDY 535 (553)
Q Consensus 522 ~~~~~~~v~~Ll~~ 535 (553)
+.|+.++|++|++.
T Consensus 326 ~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 326 RLGNQGACALLLSI 339 (346)
T ss_dssp HHTCTTHHHHHTTS
T ss_pred HcCcHHHHHHHhCC
Confidence 99999999999975
No 34
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.92 E-value=8.7e-25 Score=196.08 Aligned_cols=148 Identities=25% Similarity=0.330 Sum_probs=121.4
Q ss_pred CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH--------HHHHHHHHcCCCCc
Q psy11230 2 DADVNAT-NKEGITLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI--------RLVRLLLEYNVDVN 72 (553)
Q Consensus 2 ~~~~~~~-~~~g~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~--------~~v~~Ll~~~~~~~ 72 (553)
++|+|.+ |.+|+||||+||..|+.++|++|++.|++++.+ +..|+||||.|+..++ ++++++. ..+.
T Consensus 96 ~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~-d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~---~~~~ 171 (301)
T d1sw6a_ 96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYLY---PCLI 171 (301)
T ss_dssp CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG---GGGG
T ss_pred CCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcC-CcccccHHHHhhhcccchhhhhHHHHHHHHh---hhhh
Confidence 5688876 999999999999999999999999999999988 8899999999998764 3444443 3567
Q ss_pred ccCCCCCcHHHHHHhhcC--CChHH--------HHHHhhCCCC-------------------------------------
Q psy11230 73 AVDNLGNTVLHTVASIKT--RDPTA--------VEILKTNRAN------------------------------------- 105 (553)
Q Consensus 73 ~~~~~~~t~l~~a~~~~~--~~~~~--------~~~Ll~~~~~------------------------------------- 105 (553)
..|..|+||||+++.... +...+ +.++.+.+..
T Consensus 172 ~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (301)
T d1sw6a_ 172 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 251 (301)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT
T ss_pred hcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcC
Confidence 778999999998876522 22222 2333333222
Q ss_pred ccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy11230 106 VNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHTECKNHQGYNALHVA 153 (553)
Q Consensus 106 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~~ 153 (553)
+|.+|..|+||||+|++.|+.++|++|+++|++++.++..|.|||++|
T Consensus 252 in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A 299 (301)
T d1sw6a_ 252 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299 (301)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHc
Confidence 678899999999999999999999999999999999999999999876
No 35
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=8e-25 Score=168.39 Aligned_cols=119 Identities=22% Similarity=0.272 Sum_probs=111.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcccCCCCCcHHHHHHhhcCCC
Q psy11230 14 TLFQQAIVSSQTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNAVDNLGNTVLHTVASIKTRD 92 (553)
Q Consensus 14 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 92 (553)
++|+.||..|+.++|++|++.|++++.+ +.+|.||||+|+..|+ +++++|++.|++++..|..|+||||+|+.. ++
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~-d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~--g~ 79 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLP-NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC--NN 79 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT--TC
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccccccccccccccccccccccccccccccccccCcccccccchh--hH
Confidence 6899999999999999999999999988 8899999999999999 999999999999999999999999999998 99
Q ss_pred hHHHHHHhhCCCCccCCCC-CCCcHHHHH--HHcCCHHHHHHHHhc
Q psy11230 93 PTAVEILKTNRANVNIKNK-EGDTPLHIA--ARTGNYKMVRVLIDH 135 (553)
Q Consensus 93 ~~~~~~Ll~~~~~~~~~~~-~~~t~L~~A--~~~g~~~iv~~Ll~~ 135 (553)
.+++++|+++|++++..+. .+.||++++ +..|+.+++++|++.
T Consensus 80 ~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 80 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 9999999999999997764 588887665 678899999999875
No 36
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=1.6e-24 Score=194.30 Aligned_cols=178 Identities=21% Similarity=0.271 Sum_probs=109.4
Q ss_pred CCCCcccc-CCCCCcHHHHHHHcCCchHH-HHHHcCCCCCCCCCCCChHHHHHHhcCC-------HHHHHHHHhCCCCcc
Q psy11230 367 HGADVNVI-DNQGQMPLHIAVQNGYVAIP-NLIRHGANVNARNKYAKTPLHIAVEQKN-------MSALNYLLEHGAQVD 437 (553)
Q Consensus 367 ~~~~~~~~-~~~~~~~l~~a~~~~~~~~~-~ll~~~~~~~~~~~~~~~~l~~a~~~~~-------~~~~~~Ll~~g~~~~ 437 (553)
.+.+++.. |..|+||||+|+..|+.+++ .|+++|++++.++..|+||||.|+..++ .++++++.. .+.
T Consensus 95 ~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~~ 171 (301)
T d1sw6a_ 95 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLI 171 (301)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGG
T ss_pred cCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---hhh
Confidence 45566644 67777777777777777776 5667777777777777777777776543 134444432 345
Q ss_pred ccccCCCCHHHHHHHhCC----HH--------HHHHHHhcCCCC-CCCCCCCCcHHHHHHHhCCHHHH-----HHHHhcc
Q psy11230 438 ARTQLGKDPLYIAVEMHN----LS--------IVEQLLKFKANV-NSSDQFGRTVLHLAVKIQNVAIL-----ECLLVNK 499 (553)
Q Consensus 438 ~~~~~~~t~l~~A~~~~~----~~--------~v~~L~~~g~~~-~~~~~~~~t~l~~A~~~~~~~~~-----~~Ll~~g 499 (553)
..+..|+||||+++..+. .. +++++.+.+... ......+.++++.+........+ .+++..
T Consensus 172 ~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 250 (301)
T d1sw6a_ 172 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN- 250 (301)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH-
T ss_pred hcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhc-
Confidence 566677777777765443 11 333444443322 22223333444443333322222 222222
Q ss_pred CCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q psy11230 500 ADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDVKDKNGNTALHPS 553 (553)
Q Consensus 500 ~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 553 (553)
.+|.++. .|+||||+|++.|+.++|++|+++||+++++|.+|.||||+|
T Consensus 251 -~in~~D~----~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A 299 (301)
T d1sw6a_ 251 -MLNAQDS----NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299 (301)
T ss_dssp -TTTCCCT----TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred -CccCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHc
Confidence 2556655 899999999999999999999999999999999999999987
No 37
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=2e-22 Score=158.54 Aligned_cols=122 Identities=25% Similarity=0.299 Sum_probs=105.5
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCcccc------ccCCCCHHHHHHHh---CCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy11230 413 PLHIAVEQKNMSALNYLLEHGAQVDAR------TQLGKDPLYIAVEM---HNLSIVEQLLKFKANVNSSDQFGRTVLHLA 483 (553)
Q Consensus 413 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~------~~~~~t~l~~A~~~---~~~~~v~~L~~~g~~~~~~~~~~~t~l~~A 483 (553)
.|..|++.+++..+..++..|.+++.. +..|+||||+|+.. ++.+++++|+++|++++.++..|+||||+|
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A 88 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 88 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccc
Confidence 456788888888888888888776554 56788999999975 678999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCC
Q psy11230 484 VKIQNVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPD 538 (553)
Q Consensus 484 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~ 538 (553)
+..|+.+++++|+++|++++..+. .|.||||+|+++|+.+++++|++.++.
T Consensus 89 ~~~~~~~~v~~Ll~~gad~~~~d~----~g~tpL~~A~~~~~~~i~~~L~~~~~~ 139 (154)
T d1dcqa1 89 CLTDNAECLKLLLRGKASIEIANE----SGETPLDIAKRLKHEHCEELLTQALSG 139 (154)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCT----TSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cccccccccccccccCccccccCC----CCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999998877 899999999999999999999988764
No 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=1.2e-22 Score=159.89 Aligned_cols=125 Identities=18% Similarity=0.303 Sum_probs=113.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----CCCCccHHHHHHhc---CH-HHHHHHHHcCCCCcccCCCCCcHHH
Q psy11230 13 ITLFQQAIVSSQTPIAKLLAERGANINDPF-----PDDGKSCLHIAATK---NI-RLVRLLLEYNVDVNAVDNLGNTVLH 83 (553)
Q Consensus 13 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----~~~~~~~l~~A~~~---~~-~~v~~Ll~~~~~~~~~~~~~~t~l~ 83 (553)
...|..|++.+++..|+.++..|.+++.+. +..|+||||+|++. +. ++|++|+++|++++.+|..|+||||
T Consensus 7 l~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh 86 (154)
T d1dcqa1 7 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 86 (154)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccc
Confidence 346789999999999999999998876542 56789999999974 56 9999999999999999999999999
Q ss_pred HHHhhcCCChHHHHHHhhCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q psy11230 84 TVASIKTRDPTAVEILKTNRANVNIKNKEGDTPLHIAARTGNYKMVRVLIDHGAHT 139 (553)
Q Consensus 84 ~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~ 139 (553)
+|+.. ++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.++..
T Consensus 87 ~A~~~--~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~ 140 (154)
T d1dcqa1 87 YCCLT--DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 140 (154)
T ss_dssp HHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ccccc--ccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 99998 9999999999999999999999999999999999999999999976653
No 39
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.41 E-value=1.5 Score=24.80 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=26.2
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCc
Q psy11230 24 QTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVN 72 (553)
Q Consensus 24 ~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~ 72 (553)
+.++|+.|++-|+..+.. +.+|...-..+. ..++||+++.-+++
T Consensus 2 ~p~~v~~L~~MGF~~~~a-----~~Al~~t~n~~ve~A~~Wl~~h~~d~d 46 (51)
T d2crna1 2 SPSLLEPLLAMGFPVHTA-----LKALAATGRKTAEEALAWLHDHCNDPS 46 (51)
T ss_dssp SCSSHHHHHHTSCCHHHH-----HHHHHHHTSCCHHHHHHHHHHHSSSTT
T ss_pred CHHHHHHHHHcCCCHHHH-----HHHHHHHCCCCHHHHHHHHHHcCCCcC
Confidence 456788888888764322 233322222345 78889988866554
No 40
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=38.07 E-value=7.9 Score=24.46 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=28.6
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCcc
Q psy11230 24 QTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVNA 73 (553)
Q Consensus 24 ~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~~ 73 (553)
+.++|+.|.+-|++.+.. +-+|+.....+. ..++||+++.-+.+.
T Consensus 29 d~~~v~~L~~MGF~~~~a-----~~AL~~t~n~~~e~A~~Wl~~h~~d~d~ 74 (84)
T d1veka_ 29 NEEIVAQLVSMGFSQLHC-----QKAAINTSNAGVEEAMNWLLSHMDDPDI 74 (84)
T ss_dssp CHHHHHHHHHHTCCHHHH-----HHHHHHTTTCCHHHHHHHHHHHTTCSTT
T ss_pred CHHHHHHHHHcCCCHHHH-----HHHHHHHcCCCHHHHHHHHHHcCCCCCc
Confidence 667888888888864322 223333333355 888888887666543
No 41
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=33.01 E-value=13 Score=23.33 Aligned_cols=46 Identities=20% Similarity=0.048 Sum_probs=27.0
Q ss_pred CHHHHHHHHhccCCcccccccccCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCC
Q psy11230 488 NVAILECLLVNKADINAKIISGIWKGYTPLHLAVESNNEAVINKLLDYNPDLDV 541 (553)
Q Consensus 488 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~ 541 (553)
+.++++.|.+.|.+.+.... +|......+-...++||++|.-+++.
T Consensus 29 d~~~v~~L~~MGF~~~~a~~--------AL~~t~n~~~e~A~~Wl~~h~~d~d~ 74 (84)
T d1veka_ 29 NEEIVAQLVSMGFSQLHCQK--------AAINTSNAGVEEAMNWLLSHMDDPDI 74 (84)
T ss_dssp CHHHHHHHHHHTCCHHHHHH--------HHHHTTTCCHHHHHHHHHHHTTCSTT
T ss_pred CHHHHHHHHHcCCCHHHHHH--------HHHHHcCCCHHHHHHHHHHcCCCCCc
Confidence 56777888888776655432 33332222233577888887765543
No 42
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.95 E-value=13 Score=21.93 Aligned_cols=44 Identities=18% Similarity=0.225 Sum_probs=26.5
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCccHHHHHHhcCH-HHHHHHHHcCCCCc
Q psy11230 24 QTPIAKLLAERGANINDPFPDDGKSCLHIAATKNI-RLVRLLLEYNVDVN 72 (553)
Q Consensus 24 ~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-~~v~~Ll~~~~~~~ 72 (553)
+.+.|+.|++-|++.+.. +.+|...-..+. ..++||+++.-+.+
T Consensus 9 d~~~l~~L~~MGF~~~~a-----~~AL~~t~n~~~e~A~~Wl~~h~~d~d 53 (64)
T d1whca_ 9 ELTALESLIEMGFPRGRA-----EKALALTGNQGIEAAMDWLMEHEDDPD 53 (64)
T ss_dssp CCCHHHHHHTTTCCHHHH-----HHHHHHHTSCCHHHHHHHHHHHTTCSC
T ss_pred CHHHHHHHHHcCCCHHHH-----HHHHHHhCCCCHHHHHHHHHHCCCCCC
Confidence 346788888888764332 334433212245 78889988765543
Done!